Citrus Sinensis ID: 047493

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-------
Protein Sequence
MILTELFNQKRKKNGRWWLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Secondary Structure (PSIPRED)
cHHHHHHHHHccccccEEEcccccccccccEEEEEccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccEEEEccccccHHHHHHEEEccHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MILTELFNqkrkkngrwwllpndgssavgadaqliipiesahctisylgglglfqfkdlnagkSLFQRTFAAQVRFM
Flexible Loop (DISEMBL)
miltelfnqkrkkngrwwLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Low Complexity Region (SEG)
MILTELFNQKRKKNGRWWLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Disordered region (IsUnstruct)
*************NGRWWLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAA*****
Disordered Region (DISOPRED)
MILTE****K*******WL***DGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Disordered Region (DISEMBL)
MILTELFNQKRKKNGRWWLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Disordered Region (DISPRO)
MILTELFNQKRKKNGRWWLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MILTELFNQKRKKNGRWWLLPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	77	2.2.26 [Sep-21-2011]
Q8W4S4	821	Vacuolar proton ATPase a3	yes	no	0.571	0.053	0.704	2e-12
Q9SJT7	821	Vacuolar proton ATPase a2	no	no	0.571	0.053	0.681	6e-12
Q8RWZ7	817	Vacuolar proton ATPase a1	no	no	0.571	0.053	0.727	9e-12
Q920R6	833	V-type proton ATPase 116	yes	no	0.571	0.052	0.5	2e-06
Q9HBG4	840	V-type proton ATPase 116	yes	no	0.571	0.052	0.5	4e-06
Q29466	838	V-type proton ATPase 116	no	no	0.571	0.052	0.5	1e-05
Q5R422	837	V-type proton ATPase 116	yes	no	0.571	0.052	0.5	2e-05
Q9I8D0	838	V-type proton ATPase 116	no	no	0.571	0.052	0.5	2e-05
Q93050	837	V-type proton ATPase 116	no	no	0.571	0.052	0.5	2e-05
Q8AVM5	831	V-type proton ATPase 116	N/A	no	0.571	0.052	0.5	2e-05

>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLI+P+ESAH T+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct: 25 VQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIK 68

Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Involved in vacuolar nutrient storage (e.g. accumulation and storage of nitrate) and in tolerance to some toxic ions (e.g. zinc ions sequestration in vacuoles).
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1 SV=1

 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           Q+I+P+ESAH T+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct: 26 VQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIK 69

Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Involved in vacuolar nutrient storage (e.g. accumulation and storage of nitrate) and in tolerance to some toxic ions (e.g. zinc ions sequestration in vacuoles).

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIP+ESAH +I+YLG LGL QF+DLNA KS FQRTFA QV+
Sbjct: 22 VQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVK 65

Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Required during cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 32/44 (72%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          +Q+ + +E+A+C ++ LG LGL QFKDLNA  + FQR F  +VR
Sbjct: 13 SQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVR 56

Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.

Mus musculus (taxid: 10090)

>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=2

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 31/44 (70%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          +QL + +E+A+C ++ LG LGL QFKDLN   + FQR F  +VR
Sbjct: 13 SQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVR 56

Part of the proton channel of the V-ATPase that is involved in normal vectorial acid transport into the urine by the kidney.

Homo sapiens (taxid: 9606)

>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Bos taurus (taxid: 9913)

>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Pongo abelii (taxid: 9601)

>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Gallus gallus (taxid: 9031)

>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Homo sapiens (taxid: 9606)

>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct: 13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	77
357473431	822	V-type proton ATPase 116 kDa subunit a i	0.558	0.052	0.767	4e-12
356538733	818	PREDICTED: V-type proton ATPase 116 kDa	0.571	0.053	0.795	7e-12
449532830	235	PREDICTED: vacuolar proton ATPase a3-lik	0.558	0.182	0.813	1e-11
224103357	821	predicted protein [Populus trichocarpa]	0.571	0.053	0.772	1e-11
449461599	818	PREDICTED: vacuolar proton ATPase a3-lik	0.571	0.053	0.795	2e-11
356545106	818	PREDICTED: vacuolar proton translocating	0.571	0.053	0.772	2e-11
317106676	817	JHL18I08.13 [Jatropha curcas]	0.571	0.053	0.772	2e-11
255538810	810	vacuolar proton atpase, putative [Ricinu	0.571	0.054	0.772	2e-11
224080403	821	predicted protein [Populus trichocarpa]	0.571	0.053	0.75	3e-11
224085778	817	predicted protein [Populus trichocarpa]	0.688	0.064	0.629	3e-11

>gi|357473431|ref|XP_003607000.1| V-type proton ATPase 116 kDa subunit a isoform [Medicago truncatula] gi|355508055|gb|AES89197.1| V-type proton ATPase 116 kDa subunit a isoform [Medicago truncatula]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 39/43 (90%)

Query: 33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          QLIIP+ESAHCT+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct: 26 QLIIPMESAHCTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIK 68

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538733|ref|XP_003537855.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max]

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIPIESAH T+SYLG LGL QFKDLNA KS FQRT+AAQ+R
Sbjct: 24 VQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIR 67

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532830|ref|XP_004173381.1| PREDICTED: vacuolar proton ATPase a3-like, partial [Cucumis sativus]

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/43 (81%), Positives = 38/43 (88%)

Query: 33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          QLIIPIESAH TISYLG LGL QFKDLNA KS FQRT+AAQ++
Sbjct: 24 QLIIPIESAHRTISYLGDLGLLQFKDLNADKSPFQRTYAAQIK 66

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103357|ref|XP_002313024.1| predicted protein [Populus trichocarpa] gi|222849432|gb|EEE86979.1| predicted protein [Populus trichocarpa]

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIPIESAH T+SYLG LGL QFKDLNA KS FQRT+AAQ++
Sbjct: 25 VQLIIPIESAHHTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIK 68

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461599|ref|XP_004148529.1| PREDICTED: vacuolar proton ATPase a3-like [Cucumis sativus]

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIPIESAH TISYLG LGL QFKDLNA KS FQRT+AAQ++
Sbjct: 23 VQLIIPIESAHRTISYLGDLGLLQFKDLNADKSPFQRTYAAQIK 66

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545106|ref|XP_003540986.1| PREDICTED: vacuolar proton translocating ATPase 100 kDa subunit-like [Glycine max]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIPIESAH T+SYLG LGL QFKDLNA KS FQRT+AAQ++
Sbjct: 24 VQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIK 67

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106676|dbj|BAJ53179.1| JHL18I08.13 [Jatropha curcas]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIP+ESAH TISYLG LGLFQFKDLNA KS FQRT+A Q++
Sbjct: 21 VQLIIPMESAHRTISYLGDLGLFQFKDLNAEKSPFQRTYAVQIK 64

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538810|ref|XP_002510470.1| vacuolar proton atpase, putative [Ricinus communis] gi|223551171|gb|EEF52657.1| vacuolar proton atpase, putative [Ricinus communis]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIPIESAH +ISYLG LGLFQFKDLNA KS FQRT+A Q++
Sbjct: 14 VQLIIPIESAHRSISYLGDLGLFQFKDLNAEKSPFQRTYATQIK 57

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080403|ref|XP_002306128.1| predicted protein [Populus trichocarpa] gi|222849092|gb|EEE86639.1| predicted protein [Populus trichocarpa]

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 38/44 (86%)

Query: 32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           QLIIPIESAH T+SY+G LGL QFKDLNA KS FQRT+AAQ++
Sbjct: 26 VQLIIPIESAHHTVSYIGDLGLIQFKDLNADKSPFQRTYAAQIK 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085778|ref|XP_002307693.1| predicted protein [Populus trichocarpa] gi|222857142|gb|EEE94689.1| predicted protein [Populus trichocarpa]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 43/62 (69%), Gaps = 9/62 (14%)

Query: 23 DGSSAVGAD---------AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQ 73
          DGSS    D          QLIIPIESA+ TISYLG LGLFQF DLNA KS FQRT+AAQ
Sbjct: 3  DGSSGPTMDLMRSEPMQLVQLIIPIESAYRTISYLGDLGLFQFNDLNAEKSPFQRTYAAQ 62

Query: 74 VR 75
          ++
Sbjct: 63 IK 64

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	77
TAIR|locus:2120217	821	VHA-A3 "vacuolar proton ATPase	0.558	0.052	0.720	5.5e-11
TAIR|locus:2050085	821	VHA-A2 "vacuolar proton ATPase	0.558	0.052	0.697	1.2e-10
TAIR|locus:2056598	817	VHA-A1 "vacuolar proton ATPase	0.558	0.052	0.744	2.4e-10
UNIPROTKB|F1P4E6	77	ATP6V0A4 "Uncharacterized prot	0.558	0.558	0.534	1.4e-07
UNIPROTKB|K7ELZ6	93	ATP6V0A1 "V-type proton ATPase	0.571	0.473	0.5	2.1e-06
UNIPROTKB|K7EM24	130	ATP6V0A1 "V-type proton ATPase	0.571	0.338	0.5	2.1e-06
UNIPROTKB|K7EQW2	68	ATP6V0A1 "V-type proton ATPase	0.571	0.647	0.5	2.1e-06
UNIPROTKB|E9PMC5	174	TCIRG1 "V-type proton ATPase 1	0.558	0.247	0.511	2.6e-06
UNIPROTKB|E1BGJ7	834	ATP6V0A4 "Uncharacterized prot	0.571	0.052	0.522	2.9e-06
UNIPROTKB|F1P4D8	837	ATP6V0A4 "Uncharacterized prot	0.558	0.051	0.534	2.9e-06

TAIR|locus:2120217 VHA-A3 "vacuolar proton ATPase A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 5.5e-11, P = 5.5e-11
 Identities = 31/43 (72%), Positives = 38/43 (88%)

Query:    33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             QLI+P+ESAH T+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct:    26 QLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIK 68

GO:0005737 "cytoplasm" evidence=ISM

GO:0016887 "ATPase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009678 "hydrogen-translocating pyrophosphatase activity" evidence=IDA

GO:0015986 "ATP synthesis coupled proton transport" evidence=IDA

GO:0031669 "cellular response to nutrient levels" evidence=IGI

GO:0032119 "sequestering of zinc ion" evidence=IMP

GO:0043181 "vacuolar sequestering" evidence=IMP

GO:0045735 "nutrient reservoir activity" evidence=IMP

GO:0070072 "vacuolar proton-transporting V-type ATPase complex assembly" evidence=IMP

GO:0071472 "cellular response to salt stress" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2050085 VHA-A2 "vacuolar proton ATPase A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 30/43 (69%), Positives = 38/43 (88%)

Query:    33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             Q+I+P+ESAH T+SYLG LGL QFKDLN+ KS FQRT+AAQ++
Sbjct:    27 QVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIK 69

GO:0005737 "cytoplasm" evidence=ISM

GO:0016887 "ATPase activity" evidence=ISS

GO:0033177 "proton-transporting two-sector ATPase complex, proton-transporting domain" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009678 "hydrogen-translocating pyrophosphatase activity" evidence=IDA

GO:0015986 "ATP synthesis coupled proton transport" evidence=IDA

GO:0031669 "cellular response to nutrient levels" evidence=IGI

GO:0032119 "sequestering of zinc ion" evidence=IMP

GO:0043181 "vacuolar sequestering" evidence=IMP

GO:0045735 "nutrient reservoir activity" evidence=IMP

GO:0070072 "vacuolar proton-transporting V-type ATPase complex assembly" evidence=IMP

GO:0071472 "cellular response to salt stress" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2056598 VHA-A1 "vacuolar proton ATPase A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query:    33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             QLIIP+ESAH +I+YLG LGL QF+DLNA KS FQRTFA QV+
Sbjct:    23 QLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVK 65

GO:0005737 "cytoplasm" evidence=ISM

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0016887 "ATPase activity" evidence=ISS

GO:0033177 "proton-transporting two-sector ATPase complex, proton-transporting domain" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0012510 "trans-Golgi network transport vesicle membrane" evidence=IDA

GO:0070070 "proton-transporting V-type ATPase complex assembly" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|F1P4E6 ATP6V0A4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query:    33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             QL + +E+A+C ++ LG LGL QF+DLNA  S FQR F  +VR
Sbjct:    14 QLFLQVEAAYCCVAELGDLGLVQFRDLNANVSSFQRKFVNEVR 56

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0007588 "excretion" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0016471 "vacuolar proton-transporting V-type ATPase complex" evidence=IEA

GO:0031526 "brush border membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

UNIPROTKB|K7ELZ6 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query:    32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct:    13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|K7EM24 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query:    32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct:    13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|K7EQW2 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query:    32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             AQL +  E+A+C +S LG LG  QF+DLN   ++FQR F  +VR
Sbjct:    13 AQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVR 56

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|E9PMC5 TCIRG1 "V-type proton ATPase 116 kDa subunit a isoform 3" [Homo sapiens (taxid:9606)]

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query:    33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             QL +P  +A+  +S LG LGL +F+DLNA  S FQR F   VR
Sbjct:    14 QLFLPTAAAYTCVSRLGELGLVEFRDLNASVSAFQRRFVVDVR 56

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033179 "proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|E1BGJ7 ATP6V0A4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 120 (47.3 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query:    32 AQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             +QL + +E+A+C ++ LG LGL QFKDLN  +S FQR F  +VR
Sbjct:    13 SQLFLQVEAAYCCVAELGELGLVQFKDLNVKESRFQRKFVNEVR 56

GO:0051117 "ATPase binding" evidence=IEA

GO:0031526 "brush border membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0007588 "excretion" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

UNIPROTKB|F1P4D8 ATP6V0A4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 120 (47.3 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query:    33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
             QL + +E+A+C ++ LG LGL QF+DLNA  S FQR F  +VR
Sbjct:    14 QLFLQVEAAYCCVAELGDLGLVQFRDLNANVSSFQRKFVNEVR 56

GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0007588 "excretion" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0031526 "brush border membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W4S4	VHAA3_ARATH	No assigned EC number	0.7045	0.5714	0.0535	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_IX0438	hypothetical protein (822 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0023015401	SubName- Full=Putative uncharacterized protein; (216 aa)						•			0.899
	fgenesh4_pm.C_LG_II000842	inorganic pyrophosphatase (EC-3.6.1.1) (215 aa)						•			0.899
	fgenesh4_pg.C_LG_VII001101	SubName- Full=Putative uncharacterized protein; (213 aa)						•			0.899
	eugene3.00090843	inorganic pyrophosphatase (EC-3.6.1.1) (298 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XIV0223	SubName- Full=Putative uncharacterized protein; (216 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_XIII0040	vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa)						•			0.899
	estExt_fgenesh4_pg.C_1520062	SubName- Full=Putative uncharacterized protein; (768 aa)						•			0.899
	estExt_fgenesh4_pg.C_1330100	vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_X3050	vacuolar H+-translocating inorganic pyrophosphatase (636 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_I4261	SubName- Full=Putative uncharacterized protein; (296 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	77
pfam01496	707	pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni	2e-04

>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 45 ISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
          +  LG LGL Q +DLN   S FQR F  +VR
Sbjct: 1  VDALGELGLVQIRDLNEDVSAFQRKFVNEVR 31

This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	77
KOG2189	829	consensus Vacuolar H+-ATPase V0 sector, subunit a	99.93
PF01496	759	V_ATPase_I: V-type ATPase 116kDa subunit family ;	98.6
PRK05771	646	V-type ATP synthase subunit I; Validated	96.58
COG1269	660	NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E	91.34
PF09902	71	DUF2129: Uncharacterized protein conserved in bact	83.81
PRK02302	89	hypothetical protein; Provisional	82.91

>KOG2189 consensus Vacuolar H+-ATPase V0 sector, subunit a [Energy production and conversion]

Probab=99.93  E-value=3.8e-27  Score=196.93  Aligned_cols=58  Identities=38%  Similarity=0.427  Sum_probs=56.7

Q ss_pred             CCCcccccccceEEEEeecccHHHHHHHhhcccceeeeeCCCCCCccchhhhhhhhcC
Q 047493           20 LPNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM   77 (77)
Q Consensus        20 ~~~~~RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN~~v~~FqR~FvneIrRc   77 (77)
                      .+++||||+|+|||||+|+|+||+||++||++|+|||+|||++|++|||+||||||||
T Consensus         1 ~~s~fRSE~M~L~Ql~l~~eaAy~~vaeLGelGlvqFrDLN~~v~afQR~fv~evrRc   58 (829)
T KOG2189|consen    1 MGSLFRSEEMCLVQLFLQSEAAYQCVAELGELGLVQFRDLNPDVSAFQRKFVNEVRRC   58 (829)
T ss_pred             CccccccccceeeEEEecHHHHHHHHHHhhccCeeEeeeCCCccCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999999999998

>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=98.60  E-value=7.5e-09  Score=85.17  Aligned_cols=33  Identities=52%  Similarity=0.779  Sum_probs=0.0

Q ss_pred             HHHhhcccceeeeeCCCCCCccchhhhhhhhcC
Q 047493           45 ISYLGGLGLFQFKDLNAGKSLFQRTFAAQVRFM   77 (77)
Q Consensus        45 V~eLG~lglvqF~DLN~~v~~FqR~FvneIrRc   77 (77)
                      |++||++|+|||+|+|+++++|||+|+++++||
T Consensus         1 V~eLgelG~VqF~Dln~~~~~fqr~f~~ev~r~   33 (759)
T PF01496_consen    1 VNELGELGLVQFRDLNEDVSAFQRKFVNEVRRC   33 (759)
T ss_dssp             ---------------------------------
T ss_pred             CchhhcCCcEEEEECccchhHHHHHhhhccccH
Confidence            789999999999999999999999999999998

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents the 116kDa subunit (or subunit a) and subunit I found in the V0 or A0 complex of V- or A-ATPases, respectively. The 116kDa subunit is a transmembrane glycoprotein required for the assembly and proton transport activity of the ATPase complex. Several isoforms of the 116kDa subunit exist, providing a potential role in the differential targeting and regulation of the V-ATPase for specific organelles []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015991 ATP hydrolysis coupled proton transport, 0033177 proton-transporting two-sector ATPase complex, proton-transporting domain; PDB: 2RPW_X 2NVJ_A 2JTW_A 3RRK_A.

>PRK05771 V-type ATP synthase subunit I; Validated

Probab=96.58  E-value=0.0019  Score=52.68  Aligned_cols=48  Identities=15%  Similarity=0.126  Sum_probs=41.0

Q ss_pred             cccccceEEEEeecccHHHHHHHhhcccceeeeeCCCCCC-ccchhhhh
Q 047493           25 SSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKS-LFQRTFAA   72 (77)
Q Consensus        25 RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN~~v~-~FqR~Fvn   72 (77)
                      +.++|..++++.|.+.+.++++.|.++|.||+.|++.... ...+.+.+
T Consensus         2 ~i~kM~kv~l~~~~~~~~~~l~~L~~lg~vhi~~~~~~~~~~~~~~~~~   50 (646)
T PRK05771          2 APVRMKKVLIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRKLRS   50 (646)
T ss_pred             CceeeEEEEEEEEHHHHHHHHHHHHhCCCEEEeecccccchhHHhHHHH
Confidence            5689999999999999999999999999999999998875 33444433

>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]

Probab=91.34  E-value=0.21  Score=41.71  Aligned_cols=42  Identities=17%  Similarity=0.164  Sum_probs=38.1

Q ss_pred             ccccccceEEEEeecccHHHHHHHhhcccceeeeeCCCCCCc
Q 047493           24 GSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSL   65 (77)
Q Consensus        24 ~RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN~~v~~   65 (77)
                      +|-+.|..+.++.+.+..-+++.+|++.|++|+.|++.++..
T Consensus         1 ~~~~~M~kv~i~~~~~~~~~vi~~L~~~g~~~~~d~~~~~~~   42 (660)
T COG1269           1 MRPEKMKKVSIIGLKSELDPVLAELHDFGLVHLEDLEEGEKG   42 (660)
T ss_pred             CchhhheeEEEEeehhhhhHHHHHHHHcCeEEeecccccccc
Confidence            367899999999999999999999999999999999876543

>PF09902 DUF2129: Uncharacterized protein conserved in bacteria (DUF2129); InterPro: IPR016979 This is a group of uncharacterised conserved proteins

Probab=83.81  E-value=1.9  Score=27.21  Aligned_cols=36  Identities=17%  Similarity=-0.004  Sum_probs=32.8

Q ss_pred             cccccccceEEEEeecccHHHHHHHhhcccceeeee
Q 047493           23 DGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKD   58 (77)
Q Consensus        23 ~~RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~D   58 (77)
                      .+-|..|.++.||+..|.+-+++..|.++..|.=++
T Consensus        24 ~Y~Skk~kYvvlYvn~~~~e~~~~kl~~l~fVk~Ve   59 (71)
T PF09902_consen   24 HYVSKKMKYVVLYVNEEDVEEIIEKLKKLKFVKKVE   59 (71)
T ss_pred             EEEECCccEEEEEECHHHHHHHHHHHhcCCCeeEEe
Confidence            458999999999999999999999999999887665

>PRK02302 hypothetical protein; Provisional

Probab=82.91  E-value=2.6  Score=27.82  Aligned_cols=38  Identities=13%  Similarity=-0.032  Sum_probs=34.1

Q ss_pred             cccccccceEEEEeecccHHHHHHHhhcccceeeeeCC
Q 047493           23 DGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLN   60 (77)
Q Consensus        23 ~~RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN   60 (77)
                      .+=|..|.++-||+..|.|-+++..|.++..|.-++.-
T Consensus        30 ~Y~Skk~kYvvlYvn~~~~e~~~~kl~~l~fVk~Ve~S   67 (89)
T PRK02302         30 VYHSKRSRYLVLYVNKEDVEQKLEELSKLKFVKKVRPS   67 (89)
T ss_pred             EEEeccccEEEEEECHHHHHHHHHHHhcCCCeeEEccc
Confidence            45799999999999999999999999999988877644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	77
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	2e-07

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357

 Score = 45.1 bits (106), Expect = 2e-07
 Identities = 6/43 (13%), Positives = 12/43 (27%)

Query: 33 QLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQRTFAAQVR 75
           +  P   A   ++ L   G+     L   +    R    +  
Sbjct: 18 IVAGPKRLARELLAELQKAGVVHIDPLRPDELGEYRLSPTEEA 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	77
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	99.01

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}

Probab=99.01  E-value=1.1e-10  Score=85.77  Aligned_cols=56  Identities=11%  Similarity=-0.019  Sum_probs=43.6

Q ss_pred             CCcccccccceEEEEeecccHHHHHHHhhcccceeeeeCCCCCCccc--hhhh-hhhhc
Q 047493           21 PNDGSSAVGADAQLIIPIESAHCTISYLGGLGLFQFKDLNAGKSLFQ--RTFA-AQVRF   76 (77)
Q Consensus        21 ~~~~RSE~M~l~qL~ip~E~A~~~V~eLG~lglvqF~DLN~~v~~Fq--R~Fv-neIrR   76 (77)
                      +-|+|.|+|+.++|++|.+.+++++++|+++|+|||.|+|++++.|+  ++|. +++++
T Consensus         6 ~~~~~pekM~kv~l~~~~~~~~~vl~~L~~lg~vhi~d~~~~~~~~~~l~~~~~~~~~~   64 (357)
T 3rrk_A            6 GTIDDDDKMEKLIVAGPKRLARELLAELQKAGVVHIDPLRPDELGEYRLSPTEEAELKR   64 (357)
T ss_dssp             --------CEEEEEEECGGGHHHHHHHHHHHTCEEEEEECGGGGGGGCCCHHHHHHHHH
T ss_pred             CCCCChhheEEEEEEeEHHHHHHHHHHHHHcCcEEEEeccccccccccCCccchHHHhH
Confidence            45899999999999999999999999999999999999999999998  7765 44554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00