Citrus Sinensis ID: 047789

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
MQNPFNYSLFNSPQTQKPQIRTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
cccccccccccccccccccccccccccccccEEEEEcccccEEEEEccccHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHcccEEEEEccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHcccEEEc
cccccccEcccccccccccccccccccccHcEEEEEEccccEEEEEccEcHHHHHHHHHHHHHEcccEEEEcccHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEcccccccEEcHHHHcccHHHHHHHHHHHHHHcEEEEEccccccccccccHHHHHHHHHcccEEEE
mqnpfnyslfnspqtqkpqirTQTTQIREAetltitgptqlsghvpisgsknssLCLLAATLLCsnscllhnvptglsdtKTMLSILRLLGAkiefnernkeilvntdgvgraepclgemrkirggffvigpllarfgeavvglpggcdigerpVDLYVRGLRALGAAVEI
mqnpfnyslfnspqtqkpqiRTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLgakiefnernkeilvntdgvgraePCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
MQNPFNYSLFNSPQTQKPQIRTQTTQIREAETLTITGPTQLSGHVPISGSKnsslcllaatllcsnscllHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
****************************************************SSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGA****
********************************LTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
MQNPFNYSLFN************TTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
****FN*SLFNSP**********TTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQNPFNYSLFNSPQTQKPQIRTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query171 2.2.26 [Sep-21-2011]
Q3A949 419 UDP-N-acetylglucosamine 1 yes no 0.807 0.329 0.460 3e-28
Q55673 438 UDP-N-acetylglucosamine 1 N/A no 0.877 0.342 0.437 3e-27
Q3AAE9 420 UDP-N-acetylglucosamine 1 no no 0.754 0.307 0.448 2e-26
Q88UU5 438 UDP-N-acetylglucosamine 1 yes no 0.812 0.317 0.453 2e-26
A5EYD6 419 UDP-N-acetylglucosamine 1 yes no 0.801 0.326 0.461 2e-26
B3DYW2 421 UDP-N-acetylglucosamine 1 yes no 0.801 0.325 0.453 2e-26
A1VZK1 418 UDP-N-acetylglucosamine 1 yes no 0.795 0.325 0.431 3e-26
Q9PP65 418 UDP-N-acetylglucosamine 1 yes no 0.795 0.325 0.431 3e-26
Q898X3 417 UDP-N-acetylglucosamine 1 yes no 0.807 0.330 0.359 3e-26
Q5HUT8 418 UDP-N-acetylglucosamine 1 yes no 0.795 0.325 0.431 3e-26
>sp|Q3A949|MURA2_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=murA2 PE=3 SV=1 Back     alignment and function desciption
 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 93/141 (65%), Gaps = 3/141 (2%)

Query: 31  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLL 90
           E   I G  +L+G V ISG+KN++L +LA  LL   +  L  VP  L+D  TML +L+ L
Sbjct: 2   EKFVIEGKQRLTGRVKISGAKNAALPILAGALLTGGTVRLTEVPE-LTDIYTMLEVLKAL 60

Query: 91  GAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 150
           GAK+ F+E   E++++T  +  AE    ++RK+R  F V+GPLLAR G A + LPGGC I
Sbjct: 61  GAKVTFSE--GEVVLHTPEITSAEAPYEQVRKMRASFLVMGPLLARTGRARISLPGGCAI 118

Query: 151 GERPVDLYVRGLRALGAAVEI 171
           G RP+DL+++G  ALGA +E+
Sbjct: 119 GARPIDLHLKGFEALGAKIEM 139
Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) (taxid: 246194)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 7
>sp|Q55673|MURA_SYNY3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q3AAE9|MURA1_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=murA1 PE=3 SV=1 Back     alignment and function description
>sp|Q88UU5|MURA1_LACPL UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=murA1 PE=3 SV=1 Back     alignment and function description
>sp|A5EYD6|MURA_DICNV UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|B3DYW2|MURA_METI4 UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Methylacidiphilum infernorum (isolate V4) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|A1VZK1|MURA_CAMJJ UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q9PP65|MURA_CAMJE UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) GN=murA PE=3 SV=1 Back     alignment and function description
>sp|Q898X3|MURA2_CLOTE UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 OS=Clostridium tetani (strain Massachusetts / E88) GN=murA2 PE=3 SV=1 Back     alignment and function description
>sp|Q5HUT8|MURA_CAMJR UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Campylobacter jejuni (strain RM1221) GN=murA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
359493604 475 PREDICTED: UDP-N-acetylglucosamine 1-car 0.982 0.353 0.598 4e-46
307150992 436 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.894 0.350 0.474 6e-30
428224644 460 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.801 0.297 0.521 4e-29
225175819 421 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.807 0.327 0.467 5e-29
218247731 441 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.812 0.315 0.5 5e-29
428218476 463 UDP-N-acetylglucosamine1-carboxyvinyltra 0.877 0.323 0.477 5e-29
428220557 443 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.912 0.352 0.465 7e-29
218438772 441 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.871 0.337 0.487 7e-29
443477107 459 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.935 0.348 0.473 1e-28
434384503 444 UDP-N-acetylglucosamine 1-carboxyvinyltr 0.812 0.313 0.513 2e-28
>gi|359493604|ref|XP_002283120.2| PREDICTED: UDP-N-acetylglucosamine 1-carboxyvinyltransferase-like [Vitis vinifera] gi|302142903|emb|CBI20198.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  189 bits (479), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/172 (59%), Positives = 119/172 (69%), Gaps = 4/172 (2%)

Query: 1   MQNPFNYSLFNSPQT-QKPQIRTQTTQIREAETLTITGPTQLSGHVPISGSKNSSLCLLA 59
           +  P+  S    P      Q +T    +      TITG  +LSGHVPISGSKNS+L +LA
Sbjct: 13  LTKPYFVSFHKQPHILSHLQFQTPPKTLTLDPKFTITGGCKLSGHVPISGSKNSALSILA 72

Query: 60  ATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPCLGE 119
           ATL CS +  LH VP  LSDT+TM SILR LG +IE    N E+ VN DGVG  +PC  +
Sbjct: 73  ATLCCSGTSKLHGVPN-LSDTRTMASILRSLGVEIE--ACNGEMWVNADGVGSVQPCPED 129

Query: 120 MRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI 171
           + KIRGGFFVIGPLLARFGEAVV LPGGCDIG RPVDLY+RGLRALGA VE+
Sbjct: 130 IGKIRGGFFVIGPLLARFGEAVVALPGGCDIGTRPVDLYIRGLRALGAIVEL 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|307150992|ref|YP_003886376.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7822] gi|306981220|gb|ADN13101.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7822] Back     alignment and taxonomy information
>gi|428224644|ref|YP_007108741.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Geitlerinema sp. PCC 7407] gi|427984545|gb|AFY65689.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Geitlerinema sp. PCC 7407] Back     alignment and taxonomy information
>gi|225175819|ref|ZP_03729812.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Dethiobacter alkaliphilus AHT 1] gi|225168743|gb|EEG77544.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Dethiobacter alkaliphilus AHT 1] Back     alignment and taxonomy information
>gi|218247731|ref|YP_002373102.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8801] gi|257060932|ref|YP_003138820.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8802] gi|218168209|gb|ACK66946.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8801] gi|256591098|gb|ACV01985.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 8802] Back     alignment and taxonomy information
>gi|428218476|ref|YP_007102941.1| UDP-N-acetylglucosamine1-carboxyvinyltransferase [Pseudanabaena sp. PCC 7367] gi|427990258|gb|AFY70513.1| UDP-N-acetylglucosamine1-carboxyvinyltransferase [Pseudanabaena sp. PCC 7367] Back     alignment and taxonomy information
>gi|428220557|ref|YP_007104727.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Synechococcus sp. PCC 7502] gi|427993897|gb|AFY72592.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Synechococcus sp. PCC 7502] Back     alignment and taxonomy information
>gi|218438772|ref|YP_002377101.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7424] gi|218171500|gb|ACK70233.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Cyanothece sp. PCC 7424] Back     alignment and taxonomy information
>gi|443477107|ref|ZP_21066976.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Pseudanabaena biceps PCC 7429] gi|443017805|gb|ELS32168.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Pseudanabaena biceps PCC 7429] Back     alignment and taxonomy information
>gi|434384503|ref|YP_007095114.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Chamaesiphon minutus PCC 6605] gi|428015493|gb|AFY91587.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Chamaesiphon minutus PCC 6605] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
TIGR_CMR|CHY_2542 419 CHY_2542 "UDP-N-acetylglucosam 0.807 0.329 0.411 1.1e-22
TIGR_CMR|CJE_0945 418 CJE_0945 "UDP-N-acetylglucosam 0.795 0.325 0.395 3.3e-21
TIGR_CMR|SPO_A0137 421 SPO_A0137 "UDP-N-acetylglucosa 0.818 0.332 0.361 2.2e-19
TIGR_CMR|CBU_0751 434 CBU_0751 "UDP-N-acetylglucosam 0.812 0.320 0.368 8.8e-19
TIGR_CMR|CHY_2066 420 CHY_2066 "UDP-N-acetylglucosam 0.783 0.319 0.387 1.7e-18
UNIPROTKB|P0A749 419 murA [Escherichia coli K-12 (t 0.777 0.317 0.372 2.8e-18
TIGR_CMR|GSU_3102 417 GSU_3102 "UDP-N-acetylglucosam 0.807 0.330 0.368 2.1e-17
UNIPROTKB|Q9KP62 419 murA "UDP-N-acetylglucosamine 0.801 0.326 0.366 6e-17
TIGR_CMR|VC_2514 419 VC_2514 "UDP-N-acetylglucosami 0.801 0.326 0.366 6e-17
TIGR_CMR|BA_5578 429 BA_5578 "UDP-N-acetylglucosami 0.801 0.319 0.309 1.4e-16
TIGR_CMR|CHY_2542 CHY_2542 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
 Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 58/141 (41%), Positives = 82/141 (58%)

Query:    31 ETLTITGPTQLSGHVPISGSKXXXXXXXXXXXXXXXXXXXHNVPTGLSDTKTMLSILRLL 90
             E   I G  +L+G V ISG+K                     VP  L+D  TML +L+ L
Sbjct:     2 EKFVIEGKQRLTGRVKISGAKNAALPILAGALLTGGTVRLTEVPE-LTDIYTMLEVLKAL 60

Query:    91 GAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 150
             GAK+ F+E   E++++T  +  AE    ++RK+R  F V+GPLLAR G A + LPGGC I
Sbjct:    61 GAKVTFSEG--EVVLHTPEITSAEAPYEQVRKMRASFLVMGPLLARTGRARISLPGGCAI 118

Query:   151 GERPVDLYVRGLRALGAAVEI 171
             G RP+DL+++G  ALGA +E+
Sbjct:   119 GARPIDLHLKGFEALGAKIEM 139
GO:0008760 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity" evidence=ISS
GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS
TIGR_CMR|CJE_0945 CJE_0945 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_A0137 SPO_A0137 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0751 CBU_0751 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2066 CHY_2066 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P0A749 murA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3102 GSU_3102 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KP62 murA "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2514 VC_2514 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5578 BA_5578 "UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00027807001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (471 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00038228001
SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (344 aa)
• •  •• 0.986
GSVIVG00037717001
SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (527 aa)
• •   • 0.941
GSVIVG00000431001
SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (510 aa)
• •   • 0.922
GSVIVG00017740001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (320 aa)
• •   • 0.921
GSVIVG00025526001
SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (402 aa)
• •   • 0.919
GSVIVG00003087001
SubName- Full=Chromosome undetermined scaffold_139, whole genome shotgun sequence; (510 aa)
• •   • 0.892
GSVIVG00027244001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (424 aa)
•     • 0.888
GSVIVG00006883001
SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (927 aa)
•     • 0.883
GSVIVG00003447001
SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (374 aa)
• •   • 0.874
GSVIVG00021622001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (423 aa)
•     • 0.870

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
PRK09369 417 PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carb 3e-55
COG0766 421 COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl 1e-52
cd01555 400 cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyru 7e-52
TIGR01072 416 TIGR01072, murA, UDP-N-acetylglucosamine 1-carboxy 2e-45
PRK12830 417 PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carb 4e-39
pfam00275 415 pfam00275, EPSP_synthase, EPSP synthase (3-phospho 6e-24
cd01554 408 cd01554, EPT-like, Enol pyruvate transferases fami 1e-15
cd01556 409 cd01556, EPSP_synthase, EPSP synthase domain 2e-08
PRK02427 435 PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvi 1e-07
COG0128 428 COG0128, AroA, 5-enolpyruvylshikimate-3-phosphate 4e-07
TIGR01356 409 TIGR01356, aroA, 3-phosphoshikimate 1-carboxyvinyl 1e-05
PLN02338 443 PLN02338, PLN02338, 3-phosphoshikimate 1-carboxyvi 6e-05
>gnl|CDD|236486 PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated Back     alignment and domain information 
 Score =  179 bits (456), Expect = 3e-55
 Identities = 70/141 (49%), Positives = 93/141 (65%), Gaps = 2/141 (1%)

Query: 31  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLL 90
           + L I G   LSG V ISG+KN++L +LAA+LL      L NVP  LSD +TM+ +LR L
Sbjct: 2   DKLVIEGGKPLSGEVTISGAKNAALPILAASLLAEEPVTLTNVPD-LSDVRTMIELLRSL 60

Query: 91  GAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 150
           GAK+EF+     + ++   +   E     ++K+R    V+GPLLARFGEA V LPGGC I
Sbjct: 61  GAKVEFDGNG-TVTIDASNINNTEAPYELVKKMRASILVLGPLLARFGEAKVSLPGGCAI 119

Query: 151 GERPVDLYVRGLRALGAAVEI 171
           G RPVDL+++GL ALGA +EI
Sbjct: 120 GARPVDLHLKGLEALGAEIEI 140

Length = 417
>gnl|CDD|223837 COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|238796 cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall Back     alignment and domain information
>gnl|CDD|162190 TIGR01072, murA, UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>gnl|CDD|183779 PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215834 pfam00275, EPSP_synthase, EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Back     alignment and domain information
>gnl|CDD|238795 cd01554, EPT-like, Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase Back     alignment and domain information
>gnl|CDD|238797 cd01556, EPSP_synthase, EPSP synthase domain Back     alignment and domain information
>gnl|CDD|235037 PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223206 COG0128, AroA, 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233373 TIGR01356, aroA, 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>gnl|CDD|177972 PLN02338, PLN02338, 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 171
COG0128 428 AroA 5-enolpyruvylshikimate-3-phosphate synthase [ 99.96
COG0766 421 MurA UDP-N-acetylglucosamine enolpyruvyl transfera 99.94
PRK09369 417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.93
PRK11861 673 bifunctional prephenate dehydrogenase/3-phosphoshi 99.93
PLN02338 443 3-phosphoshikimate 1-carboxyvinyltransferase 99.92
PRK12830 417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.92
PF00275 419 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1 99.92
TIGR01072 416 murA UDP-N-acetylglucosamine 1-carboxyvinyltransfe 99.91
TIGR01356 409 aroA 3-phosphoshikimate 1-carboxyvinyltransferase. 99.9
cd01555 400 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transf 99.89
PRK02427 435 3-phosphoshikimate 1-carboxyvinyltransferase; Prov 99.88
PRK11860 661 bifunctional 3-phosphoshikimate 1-carboxyvinyltran 99.88
PRK14806 735 bifunctional cyclohexadienyl dehydrogenase/ 3-phos 99.87
cd01556 409 EPSP_synthase EPSP synthase domain. 3-phosphoshiki 99.86
cd01554 408 EPT-like Enol pyruvate transferases family include 99.84
COG0128428 AroA 5-enolpyruvylshikimate-3-phosphate synthase [ 99.68
KOG0692 595 consensus Pentafunctional AROM protein [Amino acid 99.64
PF00275419 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1 99.44
TIGR01356409 aroA 3-phosphoshikimate 1-carboxyvinyltransferase. 99.4
PRK11861673 bifunctional prephenate dehydrogenase/3-phosphoshi 99.4
cd01554408 EPT-like Enol pyruvate transferases family include 99.37
cd01556409 EPSP_synthase EPSP synthase domain. 3-phosphoshiki 99.33
PRK11860 661 bifunctional 3-phosphoshikimate 1-carboxyvinyltran 99.29
TIGR01072416 murA UDP-N-acetylglucosamine 1-carboxyvinyltransfe 99.29
PRK09369417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.29
PLN02338443 3-phosphoshikimate 1-carboxyvinyltransferase 99.28
cd01555400 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transf 99.26
PRK12830417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.21
PRK02427435 3-phosphoshikimate 1-carboxyvinyltransferase; Prov 99.18
PRK14806735 bifunctional cyclohexadienyl dehydrogenase/ 3-phos 99.13
cd01553211 EPT_RTPC-like This domain family includes the Enol 98.99
COG0766 421 MurA UDP-N-acetylglucosamine enolpyruvyl transfera 98.89
KOG0692 595 consensus Pentafunctional AROM protein [Amino acid 97.23
cd01553211 EPT_RTPC-like This domain family includes the Enol 96.38
cd00875 341 RNA_Cyclase_Class_I RNA 3' phosphate cyclase domai 94.43
TIGR03399 326 RNA_3prim_cycl RNA 3'-phosphate cyclase. Members o 94.1
cd00295 338 RNA_Cyclase RNA 3' phosphate cyclase domain - RNA 93.51
TIGR03400 360 18S_RNA_Rcl1p 18S rRNA biogenesis protein RCL1. Me 93.41
PF01137228 RTC: RNA 3'-terminal phosphate cyclase; InterPro: 93.31
KOG3980 361 consensus RNA 3'-terminal phosphate cyclase [RNA p 93.23
cd00874 326 RNA_Cyclase_Class_II RNA 3' phosphate cyclase doma 92.78
PRK04204 343 RNA 3'-terminal-phosphate cyclase; Provisional 91.3
COG0430 341 RCL1 RNA 3'-terminal phosphate cyclase [RNA proces 90.81
>COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=99.96  E-value=2.1e-28  Score=214.28  Aligned_cols=130  Identities=28%  Similarity=0.343  Sum_probs=117.4

Q ss_pred             CCCccceEEEccCCHHHHHHHHHHHhhCCCeEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCCCCCCCCC
Q 047789           37 GPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDGVGRAEPC  116 (171)
Q Consensus        37 ~~~~l~g~i~vpgsKS~a~r~l~aAaLa~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~v~~~~~~~~~~I~~~~~~~~~~~  116 (171)
                      .+.+++|++++|||||++||++++|+|++|+++|+|++. |+|+++|++++++||++|+  ..++.++|+|.+. ....+
T Consensus         9 ~~~~l~G~v~~PgSKSishRalilaaLA~g~s~i~~~L~-s~D~~~tl~a~~~lG~~i~--~~~~~~~v~g~g~-~~~~~   84 (428)
T COG0128           9 KPSPLRGTVRAPGSKSISHRALLLAALAEGESTITNLLD-SEDTLATLEALRALGARIE--KEGDTLVVRGTGG-ELKEP   84 (428)
T ss_pred             cCCccceEEECCCCccHHHHHHHHHHHcCCceEEeeeec-cHhHHHHHHHHHHhCCeEE--ccCCEEEEeCCCC-CcCCC
Confidence            345699999999999999999999999999999999999 9999999999999999999  6679999999865 34444


Q ss_pred             hh--hhchhhHHHHhHHHHhhhcCCcEEEecCCCCCCCCChHHHHHHHHhCCCeEE
Q 047789          117 LG--EMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVE  170 (171)
Q Consensus       117 ~~--~~~~~~~s~~~l~~lla~~~~~~~~i~G~~~l~~Rpi~~ll~~L~~lGa~v~  170 (171)
                      +.  .+++++|++||+++++|....+.++++|+++|++|||.+|+++|++|||+|+
T Consensus        85 ~~~l~~GnSGTt~R~l~glla~~~~~~~~l~Gd~sl~~RPm~~l~~aLr~~Ga~i~  140 (428)
T COG0128          85 PAVLDCGNSGTTLRLLTGLLALGSPGETVLTGDESLRKRPMGPLVDALRQLGAKID  140 (428)
T ss_pred             CceeeeccchhHHHHHHHHHhcCCCCeEEEECChhhhhCCcHHHHHHHHHCCcEEE
Confidence            33  3899999999999999964557899999999999999999999999999996

>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK09369 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated Back     alignment and domain information
>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PLN02338 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>PRK12830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed Back     alignment and domain information
>PF00275 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); InterPro: IPR001986 This entry represents the core domain of 3-phosphoshikimate 1-carboxyvinyltransferase and UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>TIGR01072 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>TIGR01356 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>cd01555 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall Back     alignment and domain information
>PRK02427 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PRK11860 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; Provisional Back     alignment and domain information
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>cd01556 EPSP_synthase EPSP synthase domain Back     alignment and domain information
>cd01554 EPT-like Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase Back     alignment and domain information
>COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism] Back     alignment and domain information
>PF00275 EPSP_synthase: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); InterPro: IPR001986 This entry represents the core domain of 3-phosphoshikimate 1-carboxyvinyltransferase and UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>TIGR01356 aroA 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>cd01554 EPT-like Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase Back     alignment and domain information
>cd01556 EPSP_synthase EPSP synthase domain Back     alignment and domain information
>PRK11860 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; Provisional Back     alignment and domain information
>TIGR01072 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase Back     alignment and domain information
>PRK09369 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated Back     alignment and domain information
>PLN02338 3-phosphoshikimate 1-carboxyvinyltransferase Back     alignment and domain information
>cd01555 UdpNAET UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall Back     alignment and domain information
>PRK12830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed Back     alignment and domain information
>PRK02427 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>cd01553 EPT_RTPC-like This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate cyclase family (RTPC) Back     alignment and domain information
>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism] Back     alignment and domain information
>cd01553 EPT_RTPC-like This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate cyclase family (RTPC) Back     alignment and domain information
>cd00875 RNA_Cyclase_Class_I RNA 3' phosphate cyclase domain (class I) This subfamily of cyclase-like proteins are encoded in eukaryotic genomes Back     alignment and domain information
>TIGR03399 RNA_3prim_cycl RNA 3'-phosphate cyclase Back     alignment and domain information
>cd00295 RNA_Cyclase RNA 3' phosphate cyclase domain - RNA phosphate cyclases are enzymes that catalyze the ATP-dependent conversion of 3'-phosphate at the end of RNA into 2', 3'-cyclic phosphodiester bond Back     alignment and domain information
>TIGR03400 18S_RNA_Rcl1p 18S rRNA biogenesis protein RCL1 Back     alignment and domain information
>PF01137 RTC: RNA 3'-terminal phosphate cyclase; InterPro: IPR023797 RNA cyclases are a family of RNA-modifying enzymes that are conserved in eukaryotes, bacteria and archaea Back     alignment and domain information
>KOG3980 consensus RNA 3'-terminal phosphate cyclase [RNA processing and modification] Back     alignment and domain information
>cd00874 RNA_Cyclase_Class_II RNA 3' phosphate cyclase domain (class II) Back     alignment and domain information
>PRK04204 RNA 3'-terminal-phosphate cyclase; Provisional Back     alignment and domain information
>COG0430 RCL1 RNA 3'-terminal phosphate cyclase [RNA processing and modification] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
1naw_A 419 Enolpyruvyl Transferase Length = 419 8e-19
3r38_A 454 2.23 Angstrom Resolution Crystal Structure Of Udp-N 1e-18
1uae_A 419 Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Tr 1e-18
3iss_A 418 Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthas 4e-18
1ejc_A 419 Crystal Structure Of Unliganded Mura (Type2) Length 6e-18
1q3g_A 419 Mura (Asp305ala) Liganded With Tetrahedral Reaction 6e-18
2z2c_A 423 Mura Inhibited By Unag-Cnicin Adduct Length = 423 9e-18
3kqj_A 419 Mura Binary Complex With Udp-N-Acetylglucosamine Le 9e-18
1a2n_A 419 Structure Of The C115a Mutant Of Mura Complexed Wit 2e-17
1dlg_A 419 Crystal Structure Of The C115s Enterobacter Cloacae 9e-17
3vcy_A 430 Structure Of Mura (Udp-N-Acetylglucosamine Enolpyru 9e-17
3su9_A 419 E. Cloacae Mura In Complex With Udp-N-Acetylmuramic 1e-16
3v4t_A 419 E. Cloacae C115d Mura Liganded With Unag Length = 4 2e-16
3swd_A 418 E. Coli Mura In Complex With Udp-N-Acetylmuramic Ac 2e-16
2yvw_A 425 Crystal Structure Of Udp-N-Acetylglucosamine 1-Carb 7e-16
3swa_A 419 E. Cloacae Mura R120a Complex With Unag And Covalen 8e-16
2rl1_A 424 Crystal Structure Of Udp-N-Acetylglucosamine Enolpy 3e-15
3sg1_A 458 2.6 Angstrom Crystal Structure Of Udp-N-Acetylgluco 1e-14
3swg_A 425 Aquifex Aeolicus Mura In Complex With Udp-N-Acetylm 2e-14
3swe_A 424 Haemophilus Influenzae Mura In Complex With Udp-N-A 7e-14
4fqd_A 479 Crystal Structure Of The Enolpyruvyl Transferase Ni 4e-05
>pdb|1NAW|A Chain A, Enolpyruvyl Transferase Length = 419 Back     alignment and structure 
Iteration: 1

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 35  ITGPTQLSGHVPISGSKXXXXXXXXXXXXXXXXXXXHNVPTGLSDTKTMLSILRLLGAKI 94
           + GPT+L G V ISG+K                    NVP  L D  T + +L  LG K+
Sbjct: 6   VQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQLGTKV 64
Query: 95  EFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERP 154
           E   RN  + ++   V         ++ +R   + +GPL+ARFG+  V LPGGC IG RP
Sbjct: 65  E---RNGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARP 121
Query: 155 VDLYVRGLRALGAAVEI 171
           VDL++ GL  LGA +++
Sbjct: 122 VDLHIFGLEKLGAEIKL 138
>pdb|3R38|A Chain A, 2.23 Angstrom Resolution Crystal Structure Of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase (Mura) From Listeria Monocytogenes Egd-E Length = 454 Back     alignment and structure
>pdb|1UAE|A Chain A, Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Transferase Length = 419 Back     alignment and structure
>pdb|3ISS|A Chain A, Crystal Structure Of Enolpyruvyl-Udp-Glcnac Synthase (Mura):udp-N- Acetylmuramic Acid:phosphite From Escherichia Coli Length = 418 Back     alignment and structure
>pdb|1EJC|A Chain A, Crystal Structure Of Unliganded Mura (Type2) Length = 419 Back     alignment and structure
>pdb|1Q3G|A Chain A, Mura (Asp305ala) Liganded With Tetrahedral Reaction Intermediate Length = 419 Back     alignment and structure
>pdb|2Z2C|A Chain A, Mura Inhibited By Unag-Cnicin Adduct Length = 423 Back     alignment and structure
>pdb|3KQJ|A Chain A, Mura Binary Complex With Udp-N-Acetylglucosamine Length = 419 Back     alignment and structure
>pdb|1A2N|A Chain A, Structure Of The C115a Mutant Of Mura Complexed With The Fluorinated Analog Of The Reaction Tetrahedral Intermediate Length = 419 Back     alignment and structure
>pdb|1DLG|A Chain A, Crystal Structure Of The C115s Enterobacter Cloacae Mura In The Un- Liganded State Length = 419 Back     alignment and structure
>pdb|3VCY|A Chain A, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl Transferase), From Vibrio Fischeri In Complex With Substrate Udp-N- Acetylglucosamine And The Drug Fosfomycin. Length = 430 Back     alignment and structure
>pdb|3SU9|A Chain A, E. Cloacae Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys115 Length = 419 Back     alignment and structure
>pdb|3V4T|A Chain A, E. Cloacae C115d Mura Liganded With Unag Length = 419 Back     alignment and structure
>pdb|3SWD|A Chain A, E. Coli Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys115 Length = 418 Back     alignment and structure
>pdb|2YVW|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Aquifex Aeolicus Vf5 Length = 425 Back     alignment and structure
>pdb|3SWA|A Chain A, E. Cloacae Mura R120a Complex With Unag And Covalent Adduct Of Pep With Cys115 Length = 419 Back     alignment and structure
>pdb|2RL1|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Transferase From Haemophilus Influenzae In Complex With Udp-N-Acetylglucosamine Length = 424 Back     alignment and structure
>pdb|3SG1|A Chain A, 2.6 Angstrom Crystal Structure Of Udp-N-Acetylglucosamine 1- Carboxyvinyltransferase 1 (Mura1) From Bacillus Anthracis Length = 458 Back     alignment and structure
>pdb|3SWG|A Chain A, Aquifex Aeolicus Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys124 Length = 425 Back     alignment and structure
>pdb|3SWE|A Chain A, Haemophilus Influenzae Mura In Complex With Udp-N-Acetylmuramic Acid And Covalent Adduct Of Pep With Cys117 Length = 424 Back     alignment and structure
>pdb|4FQD|A Chain A, Crystal Structure Of The Enolpyruvyl Transferase Niko From Streptomyces Tendae Length = 479 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
4fqd_A 479 NIKO protein; beta/alpha inverse barrel, enolpyruv 9e-55
1ejd_A 419 MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltran 4e-54
2yvw_A 425 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 2e-53
3r38_A 454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 3e-53
3nvs_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; stru 6e-14
2o0b_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; shik 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
3rmt_A455 3-phosphoshikimate 1-carboxyvinyltransferase 1; st 2e-04
1rf6_A427 5-enolpyruvylshikimate-3-phosphate synthase; shiki 2e-04
3slh_A441 3-phosphoshikimate 1-carboxyvinyltransferase; stru 5e-04
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae} Length = 479 Back     alignment and structure
 Score =  178 bits (455), Expect = 9e-55
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 5/145 (3%)

Query: 31  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLL 90
             L I G  +LSG V  SG K+S +  +AA    S    + N P  + +T  +  I R  
Sbjct: 14  PLLEIHGGNRLSGAVRTSGFKHSLVTTVAAAATASAPVRIENCPD-IVETAVLGEIFRAA 72

Query: 91  GAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 150
           GA   ++  ++   V+     RAE     + +I G  +++  L++R G A +   GGC I
Sbjct: 73  GAHAHYDGADETFTVDASAWDRAELPADLVGRIHGSLYLLPALVSRNGVARLSASGGCPI 132

Query: 151 GE----RPVDLYVRGLRALGAAVEI 171
           GE    RP +  +  +   G    +
Sbjct: 133 GEGPRGRPDEHLLDVMGRFGVTTRL 157
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ... Length = 419 Back     alignment and structure
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A* Length = 425 Back     alignment and structure
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A* Length = 454 Back     alignment and structure
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ... Length = 450 Back     alignment and structure
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A Length = 450 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans} Length = 455 Back     alignment and structure
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A* Length = 427 Back     alignment and structure
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 3tr1_A Length = 441 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query171
2yvw_A 425 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.97
3r38_A 454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.96
3rmt_A 455 3-phosphoshikimate 1-carboxyvinyltransferase 1; st 99.96
4fqd_A 479 NIKO protein; beta/alpha inverse barrel, enolpyruv 99.96
3slh_A 441 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.95
3nvs_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.95
1ejd_A 419 MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltran 99.94
2pqc_A 445 3-phosphoshikimate 1-carboxyvinyltransferase; insi 99.93
1rf6_A 427 5-enolpyruvylshikimate-3-phosphate synthase; shiki 99.92
2o0b_A 450 3-phosphoshikimate 1-carboxyvinyltransferase; shik 99.91
3rmt_A455 3-phosphoshikimate 1-carboxyvinyltransferase 1; st 99.55
2yvw_A 425 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.51
2o0b_A450 3-phosphoshikimate 1-carboxyvinyltransferase; shik 99.5
3slh_A441 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.49
3nvs_A450 3-phosphoshikimate 1-carboxyvinyltransferase; stru 99.49
1rf6_A427 5-enolpyruvylshikimate-3-phosphate synthase; shiki 99.47
1ejd_A419 MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltran 99.41
3r38_A 454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; 99.4
2pqc_A445 3-phosphoshikimate 1-carboxyvinyltransferase; insi 99.34
4fqd_A 479 NIKO protein; beta/alpha inverse barrel, enolpyruv 99.31
3tut_A 358 RNA 3'-terminal phosphate cyclase; cyclase family, 94.89
3pqv_A 365 RCL1 protein; RTC-like, cyclase-like, modular, alp 94.15
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A* Back     alignment and structure
Probab=99.97  E-value=2.9e-30  Score=225.28  Aligned_cols=138  Identities=41%  Similarity=0.713  Sum_probs=127.0

Q ss_pred             ccccEEEeCCCccceEEEccCCHHHHHHHHHHHhhCCCeEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcC
Q 047789           29 EAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTD  108 (171)
Q Consensus        29 ~m~~~~V~~~~~l~g~i~vpgsKS~a~r~l~aAaLa~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~v~~~~~~~~~~I~~~  108 (171)
                      -|+++.|+++++++|+|++|||||++||+|++|+|++|+++|+|++. ++|+..++++|++||++|+  +++++++|++ 
T Consensus         9 ~m~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~~~i~n~~~-~~D~~~~~~~l~~lG~~i~--~~~~~~~i~~-   84 (425)
T 2yvw_A            9 YRDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPD-LLDVRNTLLLLRELGAELE--FLNNTVFINP-   84 (425)
T ss_dssp             CCCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGCSSCEEEESCCC-SHHHHHHHHHHHHTTCEEE--EETTEEEEEC-
T ss_pred             CcceEEEeCCCcceEEEEccCcHHHHHHHHHHHHhCCCCEEEecCCc-hHHHHHHHHHHHHCCCEEE--EeCCEEEEEC-
Confidence            47778899888899999999999999999999999999999999999 9999999999999999998  6778999999 


Q ss_pred             CCCCCCCChhhhchhhHHHHhHHHHhhhcCCcEEEecCCCCCCCCChHHHHHHHHhCCCeEE
Q 047789          109 GVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVE  170 (171)
Q Consensus       109 ~~~~~~~~~~~~~~~~~s~~~l~~lla~~~~~~~~i~G~~~l~~Rpi~~ll~~L~~lGa~v~  170 (171)
                      +......|.+.++.+|+++||++|++++++++.+.++|+|+|++|||++|++.|++|||+|+
T Consensus        85 ~~~~~~~p~~~~~~~rts~~~l~~l~a~~~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~  146 (425)
T 2yvw_A           85 SINSFITNQEIIRRMRASVLSLGPLLGRFGRAVVGLPGGCSIGARPIDQHLKFFKEAGADVE  146 (425)
T ss_dssp             CCCCCEECHHHHHHCGGGGGGHHHHHHHHSEEEEECCCCBTTBCCCCHHHHHHHHHTTCEEE
T ss_pred             CCCCCCCchhhhcccchHHHHHHHHhccCCcEEEEECCCcccccCCHHHHHHHHHHCCCEEE
Confidence            65445556677899999999999999988767899999999999999999999999999996
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A* Back     alignment and structure
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans} Back     alignment and structure
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae} Back     alignment and structure
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A Back     alignment and structure
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ... Back     alignment and structure
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ... Back     alignment and structure
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A* Back     alignment and structure
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A* Back     alignment and structure
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A Back     alignment and structure
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans} Back     alignment and structure
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A* Back     alignment and structure
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A Back     alignment and structure
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A Back     alignment and structure
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ... Back     alignment and structure
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A* Back     alignment and structure
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ... Back     alignment and structure
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A* Back     alignment and structure
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A* Back     alignment and structure
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae} Back     alignment and structure
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A Back     alignment and structure
>3pqv_A RCL1 protein; RTC-like, cyclase-like, modular, alpha-beta, anion pocket, R biogenesis, unknown function; HET: TAR; 2.61A {Kluyveromyces lactis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 171
d1ejda_ 419 d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl 2e-28
d1g6sa_ 427 d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate 5e-21
d1rf6a_ 427 d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate 3e-16
d1p88a_216 d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate 7e-05
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} Length = 419 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ)
species: Enterobacter cloacae [TaxId: 550]

 Score =  106 bits (266), Expect = 2e-28
 Identities = 55/141 (39%), Positives = 82/141 (58%), Gaps = 4/141 (2%)

Query: 31  ETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLL 90
           +   + GPT+L G V ISG+KN++L +L A LL      + NVP  L D  T + +L  L
Sbjct: 2   DKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQL 60

Query: 91  GAKIEFNERNKEILVNTDGVGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDI 150
           G K+   ER+  + ++   V         ++ +R   + +GPL+ARFG+  V LPGGC I
Sbjct: 61  GTKV---ERDGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAI 117

Query: 151 GERPVDLYVRGLRALGAAVEI 171
           G RPVDL++ GL  LGA +++
Sbjct: 118 GARPVDLHIFGLEKLGAEIKL 138
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Length = 427 Back     information, alignment and structure
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]} Length = 427 Back     information, alignment and structure
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Length = 216 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query171
d1ejda_ 419 UDP-N-acetylglucosamine enolpyruvyl transferase (E 99.96
d1g6sa_ 427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.96
d1rf6a_ 427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.95
d1p88a_216 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.71
d1rf6a_427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.36
d1g6sa_427 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 99.33
d1ejda_419 UDP-N-acetylglucosamine enolpyruvyl transferase (E 99.21
d1p88a_216 5-enol-pyruvyl shikimate-3-phosphate (EPSP) syntha 97.48
d1qmha2239 RNA 3'-terminal phosphate cyclase, RPTC {Escherich 90.66
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: EPT/RTPC-like
family: Enolpyruvate transferase, EPT
domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ)
species: Enterobacter cloacae [TaxId: 550]

Probab=99.96  E-value=6.6e-30  Score=219.79  Aligned_cols=137  Identities=39%  Similarity=0.739  Sum_probs=119.0

Q ss_pred             cccEEEeCCCccceEEEccCCHHHHHHHHHHHhhCCCeEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCC
Q 047789           30 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKTMLSILRLLGAKIEFNERNKEILVNTDG  109 (171)
Q Consensus        30 m~~~~V~~~~~l~g~i~vpgsKS~a~r~l~aAaLa~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~v~~~~~~~~~~I~~~~  109 (171)
                      |+++.|+|+++++|+|++|||||++||+|++|+|++|+++|+|++. ++||.+++++|++||++|+  ++ +++.|.+.+
T Consensus         1 M~~~~i~g~~~L~G~V~ipgsKS~s~Rali~aaLa~g~s~I~n~l~-s~D~~~~~~al~~LG~~I~--~~-~~~~I~~~~   76 (419)
T d1ejda_           1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQLGTKVE--RD-GSVWIDASN   76 (419)
T ss_dssp             CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCC-CHHHHHHHHHHHHTTCEEE--ES-SSEEEECTT
T ss_pred             CCeEEEeCCCeeEEEEECCCcHHHHHHHHHHHHHcCCCEEEccCCc-cHHHHHHHHHHHHCCCEEE--EC-CEEEEECCC
Confidence            7789999888999999999999999999999999999999999999 9999999999999999998  54 457788876


Q ss_pred             CCCCCCChhhhchhhHHHHhHHHHhhhcCCcEEEecCCCCCCCCChHHHHHHHHhCCCeEE
Q 047789          110 VGRAEPCLGEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVE  170 (171)
Q Consensus       110 ~~~~~~~~~~~~~~~~s~~~l~~lla~~~~~~~~i~G~~~l~~Rpi~~ll~~L~~lGa~v~  170 (171)
                      ......+.++....+++.+++++++|+++.+.++++|+++|++|||++++++|++||++|+
T Consensus        77 ~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~l~Gd~sL~~RPm~~li~~L~~lGa~i~  137 (419)
T d1ejda_          77 VNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIK  137 (419)
T ss_dssp             CCCCEECHHHHTTCGGGGGGHHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEE
T ss_pred             CCCCccchhhhhcccccccccchhhhhcCCcccccccccccCCCchhHHHHHHHhcceeEE
Confidence            6555555565444444555666677777878899999999999999999999999999986
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1p88a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qmha2 d.68.2.1 (A:5-184,A:280-338) RNA 3'-terminal phosphate cyclase, RPTC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure