Citrus Sinensis ID: 048140

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
Protein Sequence
MDGEKRDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccHcccccccHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHccccccHccccccEEcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mdgekrdekdgskslddgkmIQVCDKLIEVFmvdkptptdWRRLLVFSKEWNNLRSNFFKRCQdradaevdpEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAEsyyndpakqdDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFqdiinspsvdAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLtiedpeerlcglkdaftpgeeiegkdvdtlytTPEMLHALMKTLVDAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL
Flexible Loop (DISEMBL)
mdgekrdekdgskslddgkmiqVCDKLIEVfmvdkptptDWRRLLVFSKEWNNLRSNFFKRCQDradaevdpemkHKLLRLGRKLKEIDEDVQSHNELLEvieaapsevsQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWsaakesnmMKEEVKDILYHLYMTArgnlqrlmpKEVRILKYLltiedpeerlCGLKDaftpgeeiegkdvdtLYTTPEMLHALMKTLVDAYNFSREGSLLkeakdmmnpnMIEKIEELRKL
Low Complexity Region (SEG)
MDGEKRDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMkhkllrlgrklkEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL
Disordered region (IsUnstruct)
*******************MIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQD*************LLRL***************ELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFS***************************
Disordered Region (DISOPRED)
******************KMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRA*********HKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESI*A**AAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAW**********EEVKDILYHLYM**************RILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREG****EAKDMMNPNMIEKIEELRK*
Disordered Region (DISEMBL)
*************SLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL
Disordered Region (DISPRO)
****************DGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDGEKRDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLLRLGRKxxxxxxxxxxxxxxxxxxxxxPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	334	2.2.26 [Sep-21-2011]
Q84WN0	427	Uncharacterized protein A	no	no	0.922	0.721	0.462	5e-83

>sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2

 Score =  308 bits (788), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 218/309 (70%), Gaps = 1/309 (0%)

Query: 20  MIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLL 79
           M Q CDK+I++F+ +KP    W+  LV   EWN    NF+KRC+ RAD E DP +K KL+
Sbjct: 83  MAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLV 142

Query: 80  RLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDP 139
            L  K+K+ID++++ HN+LL+ I+  P++++ I ++R +DFT EFF ++  ++E+  +  
Sbjct: 143 SLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETL-DGL 201

Query: 140 AKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKN 199
             +D +A+L   C++AV AYD T ES+E L+ A+ KF+DI+NSPSVD+AC KI SLA+  
Sbjct: 202 EDRDAVARLATRCLSAVSAYDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAK 261

Query: 200 QLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIE 259
           +LDS+L+L+I  A++AAKES  +  E KDI+YHLY   + +L+ + PKE+++LKYLL I 
Sbjct: 262 ELDSSLILLINSAYAAAKESQTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNIT 321

Query: 260 DPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDM 319
           DPEER   L  AF+PG++ E KD   LYTTP+ LH  +K ++DAY+ ++E + +KEAK M
Sbjct: 322 DPEERFSALATAFSPGDDHEAKDPKALYTTPKELHKWIKIMLDAYHLNKEETDIKEAKQM 381

Query: 320 MNPNMIEKI 328
             P +I+++
Sbjct: 382 SQPIVIQRL 390

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
225459407	429	PREDICTED: uncharacterized protein At4g3	0.994	0.773	0.753	1e-151
449441744	437	PREDICTED: uncharacterized protein At4g3	0.985	0.752	0.760	1e-149
18400085	414	uncharacterized protein [Arabidopsis tha	0.988	0.797	0.744	1e-147
297846674	414	hypothetical protein ARALYDRAFT_473719 [	0.988	0.797	0.732	1e-144
224066903	321	predicted protein [Populus trichocarpa]	0.943	0.981	0.733	1e-137
255545588	399	conserved hypothetical protein [Ricinus	0.985	0.824	0.702	1e-137
356532984	389	PREDICTED: uncharacterized protein At4g3	0.958	0.822	0.700	1e-132
357448391	403	hypothetical protein MTR_2g029030 [Medic	0.970	0.803	0.682	1e-131
224082192	321	predicted protein [Populus trichocarpa]	0.943	0.981	0.701	1e-130
242042479	347	hypothetical protein SORBIDRAFT_01g04938	0.952	0.916	0.664	1e-126

>gi|225459407|ref|XP_002285817.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic [Vitis vinifera] gi|302141900|emb|CBI19103.3| unnamed protein product [Vitis vinifera]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/333 (75%), Positives = 300/333 (90%), Gaps = 1/333 (0%)

Query: 3   GEKRDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRC 62
           GEKRD KD  + LD+ KMI+VCDKLIEVFMVDKPTPTDWRRLL FSKEW+N+R +F++RC
Sbjct: 91  GEKRDGKDDPECLDNHKMIRVCDKLIEVFMVDKPTPTDWRRLLAFSKEWSNIRPHFYRRC 150

Query: 63  QDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAP-SEVSQIVSRRCKDFT 121
           QDRAD+E DP  KH LLRLGRKLKEIDEDV+ HNELLEVI+  P +++S +V++R KDFT
Sbjct: 151 QDRADSEGDPGKKHSLLRLGRKLKEIDEDVKRHNELLEVIKGTPPADISAVVAKRRKDFT 210

Query: 122 QEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIIN 181
           +EFF HLHTVAESY+++P +Q+ +AKLG +C+AAVQ YDT +ESIEALNAAELKFQDI+N
Sbjct: 211 KEFFVHLHTVAESYHDNPTEQNALAKLGNMCLAAVQTYDTASESIEALNAAELKFQDILN 270

Query: 182 SPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNL 241
           SPS+D ACRKIDSLAEKNQLDSALVLMITKAWSAAKESNM K+EVKD+L+HLY TARGNL
Sbjct: 271 SPSLDVACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMTKDEVKDVLFHLYTTARGNL 330

Query: 242 QRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLV 301
           QRLMPKE+RILKYLLTIEDPEE++  LKDAFTPG+EIEGKDVD LYTTPE LH  M+T+V
Sbjct: 331 QRLMPKEIRILKYLLTIEDPEEKMSALKDAFTPGDEIEGKDVDCLYTTPEKLHTWMQTVV 390

Query: 302 DAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL 334
           DA++FSREG+L++EA+D+MNP +I+K+EEL+KL
Sbjct: 391 DAFHFSREGTLIREARDLMNPKIIQKLEELKKL 423

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441744|ref|XP_004138642.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Cucumis sativus] gi|449490104|ref|XP_004158509.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Cucumis sativus]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/330 (76%), Positives = 293/330 (88%), Gaps = 1/330 (0%)

Query: 6   RDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDR 65
           ++ KD  ++LD  KM +VCDKLIEVFM+DKPTP DWRRL+ FSKEW+N+R +FF RCQDR
Sbjct: 102 QNAKDSVENLDQHKMTKVCDKLIEVFMIDKPTPKDWRRLIAFSKEWDNIRPHFFNRCQDR 161

Query: 66  ADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEA-APSEVSQIVSRRCKDFTQEF 124
           A +E DP MKHKLLR GRKLKEIDEDVQ HNELLEV+ A +PSE+ +I+SRR KDFT+EF
Sbjct: 162 AASEDDPGMKHKLLRFGRKLKEIDEDVQRHNELLEVVRATSPSELGEIISRRRKDFTKEF 221

Query: 125 FEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPS 184
           F HLHTVA+SYY+DPAKQ+ +AKLG  C+AAVQ YD  TE+IEALNAAELKFQDIINSP+
Sbjct: 222 FVHLHTVAQSYYDDPAKQNALAKLGNSCLAAVQTYDAATENIEALNAAELKFQDIINSPT 281

Query: 185 VDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRL 244
           +DAACRKID+LAEKNQLDSALVLMITKAWSAAKESNMMKEE KDILYHLY+TARGNLQRL
Sbjct: 282 IDAACRKIDNLAEKNQLDSALVLMITKAWSAAKESNMMKEEAKDILYHLYVTARGNLQRL 341

Query: 245 MPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAY 304
           MPKE+RILKYLLTI DPEE+L  LKDAFTPGEE+EG+DVD LYTTPE LH  +KT+VDAY
Sbjct: 342 MPKEIRILKYLLTINDPEEKLSALKDAFTPGEELEGQDVDCLYTTPEELHTWVKTVVDAY 401

Query: 305 NFSREGSLLKEAKDMMNPNMIEKIEELRKL 334
           +FSREG+L++EA+D+MNP +I K+EEL+ L
Sbjct: 402 HFSREGTLVREARDLMNPQLIVKLEELKGL 431

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400085|ref|NP_564471.1| uncharacterized protein [Arabidopsis thaliana] gi|12324478|gb|AAG52198.1|AC021199_4 hypothetical protein; 22958-25021 [Arabidopsis thaliana] gi|15982773|gb|AAL09734.1| At1g36320/F7F23_4 [Arabidopsis thaliana] gi|21553742|gb|AAM62835.1| unknown [Arabidopsis thaliana] gi|21655273|gb|AAM65348.1| At1g36320/F7F23_4 [Arabidopsis thaliana] gi|332193739|gb|AEE31860.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/333 (74%), Positives = 302/333 (90%), Gaps = 3/333 (0%)

Query: 5   KRDEKDGSKSL--DDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRC 62
           K ++KDGS+ +  D+ +MI+VCDKLIEVFMVDKPTP+DWRRLL FSKEW+++R +F+KRC
Sbjct: 76  KEEKKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRC 135

Query: 63  QDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIE-AAPSEVSQIVSRRCKDFT 121
           Q+RAD+E +PEMKHK+ RL RKLKE+DED+Q HNELL VI+   P+E+ ++V+RR KDFT
Sbjct: 136 QERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFT 195

Query: 122 QEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIIN 181
            EFFEHLHTVAESYY++P +Q+ +A LGKL +AAVQAYDT+TESI+ALNAAE+K QDIIN
Sbjct: 196 NEFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIIN 255

Query: 182 SPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNL 241
           SPS+DAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLY+TARGNL
Sbjct: 256 SPSLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNL 315

Query: 242 QRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLV 301
           QRLMPKEVRILKYLL+IEDP+E++  L+DAFTPG+E+EG DVD LYTTPE L +LMKT++
Sbjct: 316 QRLMPKEVRILKYLLSIEDPQEQISALQDAFTPGDELEGTDVDYLYTTPEHLQSLMKTVL 375

Query: 302 DAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL 334
           +AY+FSREGSL+KEAKD+M+P +I KIE+L+KL
Sbjct: 376 EAYHFSREGSLVKEAKDLMHPELIAKIEQLKKL 408

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846674|ref|XP_002891218.1| hypothetical protein ARALYDRAFT_473719 [Arabidopsis lyrata subsp. lyrata] gi|297337060|gb|EFH67477.1| hypothetical protein ARALYDRAFT_473719 [Arabidopsis lyrata subsp. lyrata]

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 244/333 (73%), Positives = 298/333 (89%), Gaps = 3/333 (0%)

Query: 5   KRDEKDGSKSL--DDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRC 62
           K ++KDG   +  D+ +MI+VCDKLIEVFMVDKPTP+DWRRLL FSKEW+++R +F++RC
Sbjct: 76  KEEKKDGGSEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYRRC 135

Query: 63  QDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIE-AAPSEVSQIVSRRCKDFT 121
           Q+RAD+E +PEMKHK+ RL RKLKE+DED+Q HNELL VI+   P+++ ++V+R  KDFT
Sbjct: 136 QERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPADIGELVARHRKDFT 195

Query: 122 QEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIIN 181
            EFFEHLHTVAESYY++  +Q+ +A LGKL +AAVQAYDT+TESI+ALNAAELK QDIIN
Sbjct: 196 NEFFEHLHTVAESYYDNLDEQNALASLGKLSIAAVQAYDTSTESIDALNAAELKLQDIIN 255

Query: 182 SPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNL 241
           SPS+DAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLY+TARGNL
Sbjct: 256 SPSLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNL 315

Query: 242 QRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLV 301
           QRLMPKEVRILKYLL+IEDP+E++  L+DAFTPG+E+EG DVD LYTTPE L +LMKT++
Sbjct: 316 QRLMPKEVRILKYLLSIEDPQEQMSALQDAFTPGDELEGTDVDYLYTTPEHLQSLMKTVL 375

Query: 302 DAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL 334
           +AY+FSREGSL+KEAKD+M+P +I KIE+L+KL
Sbjct: 376 EAYHFSREGSLVKEAKDLMHPELIAKIEQLKKL 408

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066903|ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|222843997|gb|EEE81544.1| predicted protein [Populus trichocarpa]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/315 (73%), Positives = 278/315 (88%)

Query: 20  MIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLL 79
           M  VC+KLIEVFMVDKPTP DWR+LL FSKEW+NLR +F+KRCQ+RAD E DP  KH LL
Sbjct: 1   MASVCNKLIEVFMVDKPTPNDWRKLLAFSKEWDNLRPHFYKRCQERADCEDDPGKKHNLL 60

Query: 80  RLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDP 139
           R  RKLKEIDEDVQ HNELL VI+AAPSE+++IV++R KDFT+EFF HL+TVA+SY+++P
Sbjct: 61  RFARKLKEIDEDVQRHNELLGVIKAAPSELTEIVAKRRKDFTKEFFVHLYTVAQSYHDNP 120

Query: 140 AKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKN 199
           ++Q+ +AKLG  CVA VQAYD  TE++EALNAAELK QDIINSPS+DAAC+KID LAEKN
Sbjct: 121 SEQNALAKLGNDCVATVQAYDCATENMEALNAAELKLQDIINSPSLDAACKKIDDLAEKN 180

Query: 200 QLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIE 259
           Q DSALVLMITKAWSAAKESNM K+EVKDILYHLY TA GNLQR +PK++RILKYLLT+E
Sbjct: 181 QFDSALVLMITKAWSAAKESNMTKDEVKDILYHLYKTAIGNLQRNVPKDIRILKYLLTVE 240

Query: 260 DPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDM 319
           DPEERLC L DAFTPGEE+EGKDVD+LYTTPE LH  +K +VDAY+ S++G+L++EA+D+
Sbjct: 241 DPEERLCALNDAFTPGEELEGKDVDSLYTTPEKLHTWIKAMVDAYHLSQDGTLMREARDL 300

Query: 320 MNPNMIEKIEELRKL 334
           MNP +I+K+EEL+KL
Sbjct: 301 MNPKIIKKMEELKKL 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545588|ref|XP_002513854.1| conserved hypothetical protein [Ricinus communis] gi|223546940|gb|EEF48437.1| conserved hypothetical protein [Ricinus communis]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/329 (70%), Positives = 283/329 (86%)

Query: 6   RDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDR 65
           R   +    +D+ KM++VCDKLI VFMVDK TP DWRRLL FSKEW+N+R +F+ RCQ+R
Sbjct: 65  RTGHENDSRIDEDKMVRVCDKLIGVFMVDKNTPADWRRLLAFSKEWDNIRPHFYSRCQER 124

Query: 66  ADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFF 125
           AD+E DP +KHKLLR  RKLKEIDEDVQ HNELLEVI+ APSE+S++V+RR KDFT+EFF
Sbjct: 125 ADSENDPGIKHKLLRFARKLKEIDEDVQRHNELLEVIKNAPSEISEVVARRRKDFTKEFF 184

Query: 126 EHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSV 185
            H+ TVA+SY+++P  Q+ +AKLG  CVAAVQAYD+TTES+EAL+AAELK QDIINSPS+
Sbjct: 185 VHVFTVAQSYHDNPTVQNALAKLGNDCVAAVQAYDSTTESMEALHAAELKLQDIINSPSL 244

Query: 186 DAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLM 245
           D+ACRKID LA KNQLDS+LVLMITKAWSAAKESNM K+EVKDIL+HLY TA GNLQRL+
Sbjct: 245 DSACRKIDDLAAKNQLDSSLVLMITKAWSAAKESNMTKDEVKDILFHLYKTAVGNLQRLV 304

Query: 246 PKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYN 305
           PK++RI+K+LL IEDPEE LC L DAFTPGEEIEG DVD LYTTPE LH  +K +VDAY+
Sbjct: 305 PKDIRIVKHLLKIEDPEELLCALTDAFTPGEEIEGNDVDCLYTTPEKLHTWIKAVVDAYH 364

Query: 306 FSREGSLLKEAKDMMNPNMIEKIEELRKL 334
            S+EG+L++EA+D+MNP +++K+EEL+KL
Sbjct: 365 SSQEGTLIREARDLMNPKIVKKLEELKKL 393

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532984|ref|XP_003535049.1| PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Glycine max]

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 225/321 (70%), Positives = 275/321 (85%), Gaps = 1/321 (0%)

Query: 15  LDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADA-EVDPE 73
           L++ ++ +VCDKLI VFMVDKPTPT WRRLL FS+EW+NLR +FF RC +RADA E DP 
Sbjct: 63  LEESRIRRVCDKLIGVFMVDKPTPTHWRRLLAFSREWSNLRPHFFARCLERADAAEEDPA 122

Query: 74  MKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAE 133
           MK KLLRL RKLK+IDEDVQ HN+LLEV+   PS +S+IVS+R KDFT+EFF H HTVAE
Sbjct: 123 MKEKLLRLARKLKQIDEDVQRHNDLLEVVRRDPSGISEIVSKRRKDFTEEFFVHFHTVAE 182

Query: 134 SYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKID 193
           SYY +  +Q+++AKLG  C+AAVQAYD  TES+E L AAELKFQDIINSPS+DAACRKID
Sbjct: 183 SYYENKEEQNELAKLGNACLAAVQAYDAATESVEKLQAAELKFQDIINSPSLDAACRKID 242

Query: 194 SLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILK 253
           +LAEK +LDS LVLMITKAWSA+KESNMMK+EVKDILYHLY TA GNLQRL+PKE+RI+K
Sbjct: 243 NLAEKKELDSTLVLMITKAWSASKESNMMKDEVKDILYHLYKTAVGNLQRLVPKEIRIVK 302

Query: 254 YLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLL 313
           YL+ IEDPEE+L  LKDAFTPGEE+EG DVD LYTTPE LH  +K+++DAY+ S EG+L+
Sbjct: 303 YLIRIEDPEEQLSALKDAFTPGEELEGTDVDNLYTTPEKLHTWIKSVLDAYHLSGEGTLI 362

Query: 314 KEAKDMMNPNMIEKIEELRKL 334
           +EA+D++NP +I+K+E L+K+
Sbjct: 363 REARDLLNPEVIQKLEVLKKV 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448391|ref|XP_003594471.1| hypothetical protein MTR_2g029030 [Medicago truncatula] gi|355483519|gb|AES64722.1| hypothetical protein MTR_2g029030 [Medicago truncatula]

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/324 (68%), Positives = 273/324 (84%)

Query: 11  GSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEV 70
            S  +D+ KMI VCDKLI VFMVDK TPTDWRRLL FS+EW+N+R +FF RC D+A +E 
Sbjct: 74  SSDVVDESKMIGVCDKLIGVFMVDKSTPTDWRRLLAFSREWDNIRPHFFARCNDKAVSET 133

Query: 71  DPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHT 130
           DP +K KLLRL RKLKEIDEDVQ HN+LL+VI   PSE+S IVS+R KDFT EFF HLHT
Sbjct: 134 DPVLKEKLLRLARKLKEIDEDVQRHNDLLDVIRKDPSEISNIVSKRRKDFTNEFFVHLHT 193

Query: 131 VAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACR 190
           V +SYY D  KQ+++ KLG+ C AAVQAYD  TESIE +NAA+LKFQDI+NSP++DAACR
Sbjct: 194 VTQSYYKDAEKQNELTKLGEACFAAVQAYDGATESIEQINAAQLKFQDILNSPTLDAACR 253

Query: 191 KIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVR 250
           KID+LAEK +LDS LVLMITKAW+AAK+SNM K+EVKDIL+HLY T+  NLQRL+PKE+R
Sbjct: 254 KIDNLAEKKELDSTLVLMITKAWAAAKDSNMTKDEVKDILFHLYKTSVANLQRLVPKEIR 313

Query: 251 ILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREG 310
           I+KY+L IEDPEE+L  LKDAFTPGEE+EG + D+LYTTPE LH  +KT+VDAY+ S+EG
Sbjct: 314 IVKYILRIEDPEEQLSALKDAFTPGEELEGNNEDSLYTTPEKLHTWIKTVVDAYHLSKEG 373

Query: 311 SLLKEAKDMMNPNMIEKIEELRKL 334
           +L++EA+D++NP +IEK+E L+K+
Sbjct: 374 TLIREARDLLNPEIIEKLEMLKKV 397

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082192|ref|XP_002306597.1| predicted protein [Populus trichocarpa] gi|222856046|gb|EEE93593.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/315 (70%), Positives = 274/315 (86%)

Query: 20  MIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLL 79
           M +VCDKLI+VFMVDKPTP DWR+LL FSKEWNNLR +F+KR Q+RAD+E DP  KH LL
Sbjct: 1   MARVCDKLIDVFMVDKPTPNDWRKLLAFSKEWNNLRPHFYKRSQERADSEDDPGKKHNLL 60

Query: 80  RLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDP 139
           +  RK KEIDED+Q HNELL VI+ APSE+S++V++  KDFT+EFF HL+TVA+SY+++P
Sbjct: 61  KFARKFKEIDEDMQRHNELLGVIKKAPSELSEVVAKHRKDFTKEFFAHLYTVAQSYHDNP 120

Query: 140 AKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKN 199
           ++Q+ +AKLG  CVAAVQAYD+ TE+ EALNAAE+K QDIINSPS+DAAC+KID LAEKN
Sbjct: 121 SEQNALAKLGNDCVAAVQAYDSATENTEALNAAEIKLQDIINSPSLDAACKKIDDLAEKN 180

Query: 200 QLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIE 259
           +LDSALVLMITKAWSAAKESNM K+EVKD+LYHLY TA GNLQR +PK++RILKYLLTIE
Sbjct: 181 KLDSALVLMITKAWSAAKESNMTKDEVKDVLYHLYKTAVGNLQRNVPKDIRILKYLLTIE 240

Query: 260 DPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDM 319
           DPEE LC L DAFT GE +EGKDVD+L TTPE L++ +K +VDAY+ S+EG+L++EA+D+
Sbjct: 241 DPEECLCALNDAFTQGEGLEGKDVDSLCTTPEKLYSWIKAMVDAYHLSQEGTLMREARDL 300

Query: 320 MNPNMIEKIEELRKL 334
           M+P  I+K+EEL+KL
Sbjct: 301 MSPKTIKKMEELKKL 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242042479|ref|XP_002468634.1| hypothetical protein SORBIDRAFT_01g049380 [Sorghum bicolor] gi|241922488|gb|EER95632.1| hypothetical protein SORBIDRAFT_01g049380 [Sorghum bicolor]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/319 (66%), Positives = 270/319 (84%), Gaps = 1/319 (0%)

Query: 17  DGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKH 76
           D KMI++CDKLI VF+VDKPTP DWR+LL FS+EW+N+R +FFKRCQ++AD E++PEMKH
Sbjct: 23  DNKMIKICDKLIGVFLVDKPTPMDWRKLLAFSREWDNIRPHFFKRCQEKADTELNPEMKH 82

Query: 77  KLLRLGRKLKEIDEDVQSHNELLEVIEAAPS-EVSQIVSRRCKDFTQEFFEHLHTVAESY 135
            LLRLGRKLKEIDEDVQ HNELLEV+++ PS E+  IV++R KDFT EFF HL+ VAESY
Sbjct: 83  NLLRLGRKLKEIDEDVQRHNELLEVVKSTPSDELGSIVAKRRKDFTVEFFNHLYYVAESY 142

Query: 136 YNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSL 195
           +++P KQ ++AKLG  CV A+QA+D TT S+EALNAAELK +DI+NSPSVDAACRKID L
Sbjct: 143 HDEPEKQTELAKLGNDCVDALQAHDDTTGSLEALNAAELKLKDILNSPSVDAACRKIDDL 202

Query: 196 AEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYL 255
           AEK +LDSALVLM++KAWSAAK +++ K E KDI++HLYMTA  NLQR MPK++RILK+L
Sbjct: 203 AEKKELDSALVLMLSKAWSAAKGTDITKSEAKDIMFHLYMTAVANLQRQMPKDIRILKHL 262

Query: 256 LTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKE 315
           + IEDPEERL  L DAFTPG E++G +VDTLYT+P+ +H   + +VDAY  SREG+LL +
Sbjct: 263 IMIEDPEERLSALNDAFTPGPELQGDNVDTLYTSPDAMHTWARAIVDAYYNSREGTLLGQ 322

Query: 316 AKDMMNPNMIEKIEELRKL 334
           A+DMMNP +I+++EE+ K+
Sbjct: 323 ARDMMNPKVIKRVEEIVKI 341

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
TAIR|locus:2035957	414	AT1G36320 "AT1G36320" [Arabido	0.988	0.797	0.717	2.8e-128
TAIR|locus:2121036	427	AT4G37920 "AT4G37920" [Arabido	0.922	0.721	0.443	1.1e-73

TAIR|locus:2035957 AT1G36320 "AT1G36320" [Arabidopsis thaliana (taxid:3702)]

 Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
 Identities = 239/333 (71%), Positives = 292/333 (87%)

Query:     5 KRDEKDGSKSL--DDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRC 62
             K ++KDGS+ +  D+ +MI+VCDKLIEVFMVDKPTP+DWRRLL FSKEW+++R +F+KRC
Sbjct:    76 KEEKKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRC 135

Query:    63 QDRADAEVDPEMXXXXXXXXXXXXEIDEDVQSHNELLEVIEAAP-SEVSQIVSRRCKDFT 121
             Q+RAD+E +PEM            E+DED+Q HNELL VI+  P +E+ ++V+RR KDFT
Sbjct:   136 QERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFT 195

Query:   122 QEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIIN 181
              EFFEHLHTVAESYY++P +Q+ +A LGKL +AAVQAYDT+TESI+ALNAAE+K QDIIN
Sbjct:   196 NEFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIIN 255

Query:   182 SPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNL 241
             SPS+DAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLY+TARGNL
Sbjct:   256 SPSLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNL 315

Query:   242 QRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLV 301
             QRLMPKEVRILKYLL+IEDP+E++  L+DAFTPG+E+EG DVD LYTTPE L +LMKT++
Sbjct:   316 QRLMPKEVRILKYLLSIEDPQEQISALQDAFTPGDELEGTDVDYLYTTPEHLQSLMKTVL 375

Query:   302 DAYNFSREGSLLKEAKDMMNPNMIEKIEELRKL 334
             +AY+FSREGSL+KEAKD+M+P +I KIE+L+KL
Sbjct:   376 EAYHFSREGSLVKEAKDLMHPELIAKIEQLKKL 408

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

TAIR|locus:2121036 AT4G37920 "AT4G37920" [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 137/309 (44%), Positives = 210/309 (67%)

Query:    20 MIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMXXXXX 79
             M Q CDK+I++F+ +KP    W+  LV   EWN    NF+KRC+ RAD E DP +     
Sbjct:    83 MAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLV 142

Query:    80 XXXXXXXEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDP 139
                    +ID++++ HN+LL+ I+  P++++ I ++R +DFT EFF ++  ++E+  +  
Sbjct:   143 SLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETL-DGL 201

Query:   140 AKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKN 199
               +D +A+L   C++AV AYD T ES+E L+ A+ KF+DI+NSPSVD+AC KI SLA+  
Sbjct:   202 EDRDAVARLATRCLSAVSAYDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAK 261

Query:   200 QLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIE 259
             +LDS+L+L+I  A++AAKES  +  E KDI+YHLY   + +L+ + PKE+++LKYLL I 
Sbjct:   262 ELDSSLILLINSAYAAAKESQTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNIT 321

Query:   260 DPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDM 319
             DPEER   L  AF+PG++ E KD   LYTTP+ LH  +K ++DAY+ ++E + +KEAK M
Sbjct:   322 DPEERFSALATAFSPGDDHEAKDPKALYTTPKELHKWIKIMLDAYHLNKEETDIKEAKQM 381

Query:   320 MNPNMIEKI 328
               P +I+++
Sbjct:   382 SQPIVIQRL 390


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      334       322   0.00085  116 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  223 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.10u 0.10s 29.20t   Elapsed:  00:00:01
  Total cpu time:  29.10u 0.10s 29.20t   Elapsed:  00:00:01
  Start:  Fri May 10 11:27:51 2013   End:  Fri May 10 11:27:52 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00015291001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (393 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	334
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 74.5 bits (182), Expect = 8e-15
 Identities = 57/363 (15%), Positives = 107/363 (29%), Gaps = 104/363 (28%)

Query: 1   MDGEKRDEKDGSKSLDDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFK 60
           +D       D S ++     I      +   +  KP       LLV     N    N F 
Sbjct: 209 IDPNWTSRSDHSSNIKLR--IHSIQAELRRLLKSKPYE---NCLLVLLNVQNAKAWNAFN 263

Query: 61  -RCQ------DRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAA----PSEV 109
             C+       +   +         + L      +  D +  + LL+ ++      P EV
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD-EVKSLLLKYLDCRPQDLPREV 322

Query: 110 SQIVSRRCKDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEAL 169
                RR     +   + L T       D  K  +  KL       +++      S+  L
Sbjct: 323 LTTNPRRLSIIAESIRDGLAT------WDNWKHVNCDKLTT----IIES------SLNVL 366

Query: 170 NAAELK--FQDI-INSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEV 226
             AE +  F  + +  PS       I            ++L +   W      +++K +V
Sbjct: 367 EPAEYRKMFDRLSVFPPSA-----HI----------PTILLSLI--WF-----DVIKSDV 404

Query: 227 KDILYHLYMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTL 286
             ++  L+                  KY L  + P+E    +   +          ++  
Sbjct: 405 MVVVNKLH------------------KYSLVEKQPKESTISIPSIY----------LELK 436

Query: 287 YTTPEM--LHALMKTLVDAYNFSRE---GSLLKEAKD----------MMNPNMIEKIEEL 331
                   LH   +++VD YN  +      L+    D          + N    E++   
Sbjct: 437 VKLENEYALH---RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493

Query: 332 RKL 334
           R +
Sbjct: 494 RMV 496

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 53/384 (13%), Positives = 111/384 (28%), Gaps = 122/384 (31%)

Query: 16  DDGKMIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMK 75
           + G+       ++ VF               F   ++         C+D  D        
Sbjct: 10  ETGEHQYQYKDILSVFEDA------------FVDNFD---------CKDVQD-------- 40

Query: 76  HKLLRLGRKLKEIDEDVQSHNE------LLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLH 129
             + +     +EID  + S +       L   + +   E   +V +  ++  +  ++ L 
Sbjct: 41  --MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE---MVQKFVEEVLRINYKFLM 95

Query: 130 TVAESYYNDPAK------------QDDIAKLGKLCVAAVQAYDTTTESIEALN------- 170
           +  ++    P+              +D     K  V+ +Q Y    +++  L        
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI 155

Query: 171 -----------AAEL----KFQDIINSP----SVDAACRKIDSLAEKNQLDSALVLMITK 211
                      A ++    K Q  ++      ++   C   +++ E  Q    L+  I  
Sbjct: 156 DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL-KNCNSPETVLEMLQ---KLLYQIDP 211

Query: 212 AWSAAKESN----MMKEEVKDILYHLYMTARGNLQRLMPKEVRIL--------------- 252
            W++  + +    +    ++  L  L         +     + +L               
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLK------SKPYENCLLVLLNVQNAKAWNAFNLS 265

Query: 253 -KYLLTIEDPEERLCGLKDAFTPGE--EIEGKDVDTLYTTPEMLHALMKTLVDAYNFSRE 309
            K LLT          + D  +      I         T  E+   L+K L       R 
Sbjct: 266 CKILLTTRFK-----QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-----CRP 315

Query: 310 GSLLKEAKDMMNPNMIEKI-EELR 332
             L +E     NP  +  I E +R
Sbjct: 316 QDLPREVLT-TNPRRLSIIAESIR 338

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 36/166 (21%)

Query: 119 DFTQEFFEHLHTVAESYYND--PAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKF 176
           DF  E  EH +      Y D     +D         V      D        L+  E+  
Sbjct: 8   DF--ETGEHQYQ-----YKDILSVFEDAF-------VDNFDCKDVQDMPKSILSKEEID- 52

Query: 177 QDIINSPSVDAACRKI-DSLAEK--NQLDSAL--VLMITKAWSAAKESNMMKEEVKD--I 229
             II S    +   ++  +L  K    +   +  VL I   +  +     +K E +   +
Sbjct: 53  -HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP----IKTEQRQPSM 107

Query: 230 LYHLYMTARGNL----QRLMPKEVRILKYLLTIEDPEERLCGLKDA 271
           +  +Y+  R  L    Q      V  L+  L +    + L  L+ A
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL---RQALLELRPA 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00