Citrus Sinensis ID: 048368


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900----
MHMATVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPESTATAPEFASLPFLPFQNGYYDGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQKKPLRNSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQISPLSESFISWSSSSTTSSVESNISSSKPLNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYEKIPEASEE
cccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEEEEEEEEcccccccccccccccccccccccEEEEEEEEEEEcccccEEEEcccccccccccccccccEEEEccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEEccccccccccccccccEEEEEcEEEcccccEEEEEEEccccccccccccccccccEEEEEEccEEEEEEccEEEEEEEcccccccccccccEEEcccccccccccccEEEEcHHHHccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccccccccEEEEEEEEEEEEEcccccEEEEEccccccccccccccccccEEEEEEEEcccccccccccEEEEEEEccccccccccccEEEEEEEEEEEcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEHHHHHHHHHHHEEEEcccccccccEEcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccEEEHHHHHHHHcEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccEEEEcccccc
ccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccccccccccEEccccHHccccccccccccccEEEEcccccEEcccccEEEEEEEEEEEccccccccccccccccccccccccEEEEEEEEEEEEccccEEEEEEcccccccccccEccccEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHccccEEEccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEEccccccccccccccccEEEEEEEEcccccEEEEEEEEEEEccccccccccccccEEEEEEEcEEEEEEccEEEEEEEEEcccccccccccEEEEEEcccccccccccEEEEEEHHHHHHHccccccccHcccccccccccccccEEEEEEcccccccccccccccccccccHHcccccccccccccccccccccccEEEEEEEEEEEcccccccccccEEEcccccccccEEEEEEEEEEcccccEEEEEEEcEccccccccccccccEEEEEEEEEcccccccccccEEEEEEEccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHHHHccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccEEEEEcccccc
mhmatvpltlHGCCFLISWLIHTFIFLLLSthcngtqisysdhcasvvpestatapefaslpflpfqngyydggdrildpnpseyssnkhnllsfhtqnvyttnaegvfkfegnlhfynsyhfghgrtyghsffsplrtgddsalsfslkgfwskssgklcmvgsgtsyspegnllhhpavlklngvkdssnITSLYTMFSKELENkcsgeisvpaenlSLRLQVSSTICSILKRRVNEFELEYasdcnsstscnpfgdavgylpqvmslntiqcskeGQRLRFlmefpnssdvgyyrsfnpettfvaegswdwkknRLCVAACRILnthdsldnssvedcsirltlrfpaiwsirastsmsgqiwsnralndtgyfgrilfqstdnevlkvpglkyeytEMEKVrnmsclqkkplrnslekypdgfsqeMNFGISVKisggkiawghalpiavddqisplsesfiswssssttssvesnissskplnisykisfrpyyylkLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGcrdaglkyqkssnnsmdceisirlqfpplnamtkggfirGRITSlrnksdslyfeplFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALffqneyphsvllrsggwleVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWrtsktgimaQSFLYNNHQHSLWGNLRSYAGLildgfllpqILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNyvqefdglyiyadpaadiystGWDVAILFVGLLFAAIIHFQQQfggrcllprrfrelevyekipeasee
MHMATVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPESTATAPEFASLPFLPFQNGYYDGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFvaegswdwkKNRLCVAACRILnthdsldnssvedCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILfqstdnevlkvPGLKYEYtemekvrnmsclqkkplrNSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQISPLSESFISWSsssttssvesnissskplnisyKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLrnksdslyfEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELevyekipeasee
MHMATVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPESTATAPEFASLPFLPFQNGYYDGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQKKPLRNSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQIsplsesfiswssssttssvesnisssKPLNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYEKIPEASEE
****TVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPESTATAPEFASLPFLPFQNGYYDGGDRIL***********HNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQ**********YPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQISPL***FI********************LNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYE********
************CCFLISWLIHTFIFLLLSTHCNGTQISYSDHCA*****************FLPFQNGYYDGGDRILDPNPS***SNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYH**********************LSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGE***************STICSILKRRVNEFELEYASD****************LPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTH*******VEDCSIRLTLRFPAIWSIRASTSMSGQIW************************KVPGLKYEYTEMEK********************DGFSQEMNFGISVKISG*****GHALPIAVDDQISPLSESFI*********************NISYKISFRPYYY***************WERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQ**SNNSMDCEISIRLQFPPL**********************LYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHS*******************ALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVY**IP*****
MHMATVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPESTATAPEFASLPFLPFQNGYYDGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQKKPLRNSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQISPLSESF*****************SSKPLNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYEKIPEASEE
****TVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPEST****EFASLPFLPFQNGYYDGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQKKPL*NSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQISPLSESFISWSSSSTTSSVESNISSSKPLNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYEKIPE****
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MHMATVPLTLHGCCFLISWLIHTFIFLLLSTHCNGTQISYSDHCASVVPESTATAPEFASLPFLPFQNGYYDGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPAVLKLNGVKDSSNITSLYTMFSKELENKCSGEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQKKPLRNSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDDQISPLSESFISWSSSSTTSSVESNISSSKPLNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGALIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYEKIPEASEE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query904
224126567935 predicted protein [Populus trichocarpa] 0.946 0.915 0.504 0.0
359493665932 PREDICTED: uncharacterized protein LOC10 0.955 0.927 0.491 0.0
255575730934 conserved hypothetical protein [Ricinus 0.954 0.923 0.479 0.0
359493663946 PREDICTED: uncharacterized protein LOC10 0.955 0.913 0.488 0.0
147822078 1269 hypothetical protein VITISV_027858 [Viti 0.955 0.680 0.488 0.0
302143012 1709 unnamed protein product [Vitis vinifera] 0.945 0.500 0.481 0.0
359493667981 PREDICTED: uncharacterized protein LOC10 0.960 0.884 0.455 0.0
225461435916 PREDICTED: uncharacterized protein LOC10 0.955 0.943 0.463 0.0
359496164708 PREDICTED: uncharacterized protein LOC10 0.766 0.978 0.509 0.0
255556061964 conserved hypothetical protein [Ricinus 0.926 0.869 0.417 1e-179
>gi|224126567|ref|XP_002329586.1| predicted protein [Populus trichocarpa] gi|222870295|gb|EEF07426.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/935 (50%), Positives = 614/935 (65%), Gaps = 79/935 (8%)

Query: 14  CFLISWLIHTFIFLLLST-------HCNGTQI-SYSDHCASVVPESTAT-APEFASLPFL 64
           C+L SWL H  +FL+LST        C+   I +Y+ HCAS+VPEST    PE  ++PF 
Sbjct: 34  CYL-SWL-HVAMFLVLSTTFYTPMVSCSKIDIPNYNKHCASIVPESTPNDVPEITTIPFA 91

Query: 65  PFQNGYYDGGDRILD-PNPSEY---SSNKHNLLSFHTQNVYTTNAEGVFKFEGNLHFYNS 120
             Q GY+ GG+ IL+ PN S Y   +SN+  L   HT +VY+T+ + VFK E +L     
Sbjct: 92  AEQGGYFLGGEDILNHPNSSRYHYPTSNRRELF-IHTHSVYSTDVDDVFKVEASLIL--- 147

Query: 121 YHFGHGRTYGHSFFSPLRTGDDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHHPA 180
                 RT    F+         ALSF +KGFWS S+GKLCMVGSG++YS EG  +   A
Sbjct: 148 ------RTSDMEFYVSDDRSPRGALSFEVKGFWSISTGKLCMVGSGSTYSEEGKHVVLAA 201

Query: 181 VLKLNGVKDSSNITSL-------------------------------YTMFSKELENKCS 209
           +LKL+ V+ SS I+SL                               +T   K L++ C+
Sbjct: 202 LLKLDEVRKSSTISSLVRGILESSSTAGDSGYFKPISLLMFPQNNYEFTEVGKALDHVCT 261

Query: 210 GEISVPAENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMS 269
           G I VP +NLSL L++S+ IC+   R    F+LEY+S C S++SCNPFG+ VG+LPQ+MS
Sbjct: 262 GGIVVP-KNLSLSLKLSTRICNAFSRWHTFFKLEYSSGCKSTSSCNPFGEGVGHLPQIMS 320

Query: 270 LNTIQCSKEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNT 329
           L  IQC ++ +RLRFL+EF NSS  GY   F P TT VAEGSWD  KN+LCV  CRILN+
Sbjct: 321 LKLIQCLEDKRRLRFLIEFHNSSYGGYNHPFTPNTTLVAEGSWDVNKNQLCVVGCRILNS 380

Query: 330 HDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEV 389
            +S + S +EDCS+RL+ RFPA+WSIR ++ M G IWSN+  ND GYF  I+F+S +N V
Sbjct: 381 ANSFNKSHIEDCSVRLSFRFPAVWSIRNTSGMMGHIWSNKRENDPGYFNTIMFRSHENFV 440

Query: 390 LKVPGLKYEYTEMEKVRNMSCLQKKPLRNSLEKYPDGFSQEMNFGISVKISGGK-IAWGH 448
             +PG KY+YT ++K R  SC +K+P +N  +++PD  S +M F + V+ S  + I WG+
Sbjct: 441 AGIPGSKYQYTVVDKARK-SCSEKQPRKNKGKRHPDANSNDMKFNMVVRDSKRRRIGWGY 499

Query: 449 ALPIAVDDQISPLSESFISWSSSSTTSSVESNISSSKPLNISYKISFRPYYYLKLGGLES 508
           + PIAV DQIS  ++  IS S  +  S V+   + S PLN+SY +SF+            
Sbjct: 500 SQPIAVGDQISRRNDFVISSSLRAAYSPVKGKTNHSIPLNMSYSMSFQ------------ 547

Query: 509 LFNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNNSMDCEISIRLQFPPL 568
             N S+     V +++EGIYD+ETG LCMVGCR      + S N+SMDC+I I +QFPP+
Sbjct: 548 -LNEST----YVQVFSEGIYDAETGKLCMVGCRYLDSNNRTSDNDSMDCKILINVQFPPV 602

Query: 569 NAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTL 628
           ++     +I+G I + R KSD L+ EPL  SA S+Y    R SIWRMDLE++M LIS TL
Sbjct: 603 DS---NDYIQGTIENTRKKSDPLFSEPLSFSAASFYSQHSRESIWRMDLEIIMSLISNTL 659

Query: 629 ACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSG 688
            C+FV +Q+ YVKKH  V PFISLLML++LTLGHM  L+LNFEALF   E   + L RSG
Sbjct: 660 VCVFVGYQISYVKKHPAVFPFISLLMLLVLTLGHMIPLMLNFEALFVPKESRTTFLRRSG 719

Query: 689 GWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALWTAEKKALFLTVPVYLAGA 748
           GW+E +EVIVRV+TMV+FLL  RLLQ   S R  D   KA   AEKK L+L++P+Y++G 
Sbjct: 720 GWVEANEVIVRVITMVSFLLQFRLLQLVWSARFADGKRKAFLAAEKKTLYLSLPLYISGG 779

Query: 749 LIALFVNWRTSKTGIMAQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSREN 808
           LIAL+VNWR +K G   +    + +Q SLW +LRSY GL+LDGFL PQILLNIFHNS EN
Sbjct: 780 LIALYVNWRNNKVGEGMEYAYSSTYQSSLWVDLRSYGGLVLDGFLFPQILLNIFHNSTEN 839

Query: 809 ALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYSTGWDVAILFVGLL 868
           ALSRFFYIG T VRL+PHAYD+YRA  YV++FDG Y+YADP  D YST WDV I  VGLL
Sbjct: 840 ALSRFFYIGTTFVRLLPHAYDLYRANYYVEDFDGSYMYADPGGDYYSTAWDVIIPLVGLL 899

Query: 869 FAAIIHFQQQFGGRCLLPRRFRELEVYEKIPEASE 903
           FAAII+ QQ+FGGRC +P+RF+ELE YEK+P AS+
Sbjct: 900 FAAIIYLQQRFGGRCFMPKRFKELEGYEKVPVASD 934




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493665|ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575730|ref|XP_002528764.1| conserved hypothetical protein [Ricinus communis] gi|223531767|gb|EEF33586.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|359493663|ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147822078|emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143012|emb|CBI20307.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493667|ref|XP_002282367.2| PREDICTED: uncharacterized protein LOC100255441 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461435|ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera] gi|302143014|emb|CBI20309.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359496164|ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255556061|ref|XP_002519065.1| conserved hypothetical protein [Ricinus communis] gi|223541728|gb|EEF43276.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query904
TAIR|locus:2119078962 AT4G21700 "AT4G21700" [Arabido 0.734 0.690 0.418 3.2e-149
TAIR|locus:20115661059 AT1G52780 "AT1G52780" [Arabido 0.390 0.333 0.3 1.2e-32
TAIR|locus:2119078 AT4G21700 "AT4G21700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1319 (469.4 bits), Expect = 3.2e-149, Sum P(2) = 3.2e-149
 Identities = 296/707 (41%), Positives = 424/707 (59%)

Query:   217 ENLSLRLQVSSTICSILKRRVNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCS 276
             E+LSL   V   +C + + R + F L Y +DC    SC+PFG  V Y P  MS+ +  C 
Sbjct:   269 ESLSLE-NVLGGMCKVFEGRSHVFGLMYRNDCGVDHSCSPFGSDVEYTPGFMSMLSFLC- 326

Query:   277 KEGQRLRFLMEFPNSSDVGYYRSFNPETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNS 336
              +G+++R L+ F N S       F+P T+ VAEGSWD ++NR C  ACRILN  DSL N+
Sbjct:   327 -DGEKMRMLLSFSNMSGYSSLFPFDPRTSLVAEGSWDVERNRFCGVACRILNFSDSLSNA 385

Query:   337 SVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRALNDTGYFGRILFQSTDNEVLKVPGLK 396
              V+DCS+RL+LRFPAI SI++   + G++WS +A +D  YF RI F S ++++ + P L+
Sbjct:   386 VVDDCSLRLSLRFPAILSIKSMAPVVGELWSAQAESDPSYFRRIEFSSLNDQLWRFPSLR 445

Query:   397 YEYTEMEKVRNMSCLQK-KPLRNSLEKYPDGFSQEMNFGISVKISG-GKIA-WGHALPIA 453
             YEYTE E+V  +    K +P R     YPD  + +M F +SVK SG G +     A P  
Sbjct:   446 YEYTESERVGKLCGAGKSRPKRKG-NHYPDAQTSDMRFVMSVKYSGEGNVLRTARASPYF 504

Query:   454 VDDQIXXXXXXXXXXXXXXXXXXXXXXXXXXKPLNI-SYKISFRPYYYLKLGGLESLFNI 512
             V D++                           P+N+ S   SF    Y     + SL N 
Sbjct:   505 VGDRLYRDLLVRGQGVGLTGI-----------PMNVNSVTKSFTNITYR----IRSL-NP 548

Query:   513 SSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKS-SNNSMDCEISIRLQFPPLNAM 571
             +S  E R  IYAEG YD +TG LCMVGC+   LK   +  N ++DC ++I++ F P+++ 
Sbjct:   549 NS--ESRGDIYAEGTYDRDTGELCMVGCQSVRLKNTVAIQNETVDCSLAIKINFSPIDSR 606

Query:   572 TKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACI 631
             +    ++G I S R K+D LY   + V + S Y    + S+WRMDLE+ MVL+S TL+C+
Sbjct:   607 SDDR-LKGTIKSTREKTDPLYVGRMEVLSRSIYVHQAKESVWRMDLEVAMVLVSNTLSCL 665

Query:   632 FVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWL 691
             F+  QL ++K+H++ LPFIS+ ML+++TLGHM  L+LNFE LF  +    ++   +  WL
Sbjct:   666 FLGMQLYHMKQHQEALPFISVAMLILITLGHMIPLLLNFEELFKGSHNQRNLFFENDRWL 725

Query:   692 EVHEVIVRVVTMVAFLLHCRLLQHS-LSRRMRDNSLKA-LWTAEKKALFLTVPVYLAGAL 749
             E  E++VR+VT++AFLL CRLLQ +  +R+  D+  +  +W AEKK  ++ +P+Y+ G L
Sbjct:   726 EAKEIVVRIVTLIAFLLECRLLQLAWTARKTGDHHHREDVWKAEKKVSYVCLPLYITGGL 785

Query:   750 IALFVNW-RTSKTGI-----MAQSFLYN--NHQHS-----LWGNLRSYAGLILDGFLLPQ 796
             IA  VN  RT K  +      A++ LY   N + S     LW +L+SY GL+LD FLLPQ
Sbjct:   786 IAWLVNRNRTPKRIVYIGKPQARNLLYRPVNLKRSFQRPPLWKDLKSYGGLMLDAFLLPQ 845

Query:   797 ILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDGLYIYADPAADIYST 856
             IL N F NS    L+  FY+G + VRL+PHAYD+YR+ +Y +  D  +IYA+   D YST
Sbjct:   846 ILFNGFSNSDLKPLAALFYVGNSFVRLLPHAYDLYRSHSYGKILDWSFIYANHKMDYYST 905

Query:   857 GWDVAILFVGLLFAAIIHFQQQFGGRCLLPRRFRELEVYEKIPEASE 903
              WD+ IL +G LFA +I  QQ+FGGRC +P+RFRE   YEK+ E  +
Sbjct:   906 AWDIIILCIGFLFAFLIFLQQRFGGRCFIPKRFREYVGYEKVVELQQ 952


GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2011566 AT1G52780 "AT1G52780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.01180056
hypothetical protein (935 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query904
pfam11145871 pfam11145, DUF2921, Protein of unknown function (D 0.0
>gnl|CDD|221000 pfam11145, DUF2921, Protein of unknown function (DUF2921) Back     alignment and domain information
 Score =  609 bits (1571), Expect = 0.0
 Identities = 327/926 (35%), Positives = 450/926 (48%), Gaps = 133/926 (14%)

Query: 40  YSDHCASVVPESTATAPEFASLPF-----LPFQNGYY--DGGDRILDPNPSEYSSNKHNL 92
           YSDHC+S+VPES+    E  + P      L F +G +   GGD +   + S+   +   L
Sbjct: 1   YSDHCSSIVPESSELKDEDPTRPLVRSRQLSFFDGDWFQSGGDPLFPRDGSDAGDSL-RL 59

Query: 93  LSFHTQNVY-TTNAEGVFKFEGNLHFYNSYHFGHGRTYGHSFFSPLRT----GDDSALSF 147
            SF   ++  T  A  + K EG L    S        Y                 + LS 
Sbjct: 60  ASFSVTHIRKTRRAGKIIKVEGVLVLTISRTSASSSYYSGDHGQSSLEFELIPGGTQLSI 119

Query: 148 SLKGFWSKSSGKLCMVGSGTSYSPEGN--LLHHPAVLKLNGVKDSSNITSL--------- 196
             +GF+S+S G LCMVGSG   S +G    L   A+L L   K+S+  T L         
Sbjct: 120 VFQGFYSESEGVLCMVGSGVLKSVDGPPVKLDEDALLMLRYPKESTLTTRLVTGELESTD 179

Query: 197 ------------------------YTMFSKELENKCSGEISVPAENLSLRLQVSSTICSI 232
                                   Y + ++  +     +  V   +    L   +  C +
Sbjct: 180 SLSDLAYFDTISLVSYPGTPDNYEYELVAEACDPFMYKDTGVNGGSSLSDLYKGNGFCDV 239

Query: 233 LKRRVNE-FELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNS 291
           L+R  +  F LEY  DCNS+  C+PFG    Y P  +S+  + C   G  +R  + F   
Sbjct: 240 LERLTSRVFTLEYNWDCNSTDECSPFGGPFEYTPVRISMQDVHCEGNG-AVRVSVVFRAV 298

Query: 292 SDVGYYRSFNP-----ETTFVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLT 346
           S   +   F+P       T VAEG WD    RLC+ ACRI N+  SL N+ V DCS+RL+
Sbjct: 299 SPYEHLYPFDPRTGLRNMTLVAEGVWDASTGRLCMVACRIGNSSASLSNAVVGDCSLRLS 358

Query: 347 LRFPAIWSIRASTSMSGQIWSNRAL--NDTGYFGRI-----LFQSTDNEVLKVPGLKYEY 399
           LRFP  +SIR  + + G+IWS      N    F RI     +F S +  +     +KYEY
Sbjct: 359 LRFPTTFSIRDRSIVVGEIWSANTGPSNFPLSFRRIVPPSDMFNSFNRSLSNPRVVKYEY 418

Query: 400 TEMEKVRNMSCLQKKP--LRNSLEKYPDGFSQ----EMNFGISVKISGGKIAWGHALPIA 453
           T++E+   +   + KP   + SL  YP         ++ F +SVK S G    G A P+ 
Sbjct: 419 TKVERAGKL-LRRNKPSGKKKSLVSYPGNLGMYSLSDLAFDLSVKFSAGPNRTGRASPLF 477

Query: 454 VDDQI---SPLS-ESFISWSSSSTTSSVESNISSSKPLNISYKISFRPYYYLKLGGLESL 509
           V   +    PLS  S  + ++      +  N+  S+ LN+SY IS              L
Sbjct: 478 VGPLLYRFDPLSRNSGSTRTAPYPGIPMVVNMQHSQLLNVSYDISL----------SGPL 527

Query: 510 FNISSSWERRVAIYAEGIYDSETGVLCMVGCRDAGLKYQKSSNN-SMDCEISIRLQFPPL 568
                    R  I AEG+YD ETG LCMVGCRD  L ++ SSN   MDC I +R      
Sbjct: 528 S------GSRSVISAEGVYDRETGRLCMVGCRDVRLPWRISSNEEGMDCSILLRST---- 577

Query: 569 NAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTL 628
                                             YYR   + SIWRMDLE +MV++S TL
Sbjct: 578 --------------------------------PIYYRRQAKDSIWRMDLEGIMVVVSLTL 605

Query: 629 ACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSG 688
           +C+F   QL +VK H DVLPF+SL+ML +  LG+M  LVLNFEALF  +    +  L   
Sbjct: 606 SCVFAGLQLFHVKSHPDVLPFVSLVMLGVQALGYMTPLVLNFEALFKGSHRTQNTPLERD 665

Query: 689 GWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKAL--WTAEKKALFLTVPVYLA 746
           GWLE +EV VRV+T++AFLL  RLLQ     R R  +        AE+K L++ +P+YL 
Sbjct: 666 GWLEANEVTVRVLTLIAFLLTLRLLQLVWRSRARALARSPEEPSPAERKVLYVCLPLYLL 725

Query: 747 GALIALFVNWRTSKTGIM----AQSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIF 802
           G LIAL V+   +  GI+     Q    +    +LW +L SYAGL+LDGFLLPQ++ N F
Sbjct: 726 GGLIALAVHRIRTNKGIVYIEKPQVVRISFQSPTLWADLESYAGLVLDGFLLPQVIFNAF 785

Query: 803 HNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQEFDG-LYIYADPAADIYSTGWDVA 861
            +SR   LS +FY+G+T+VRL+PH YD+ RA NYV  F G  +IYA+P  D +ST WDV 
Sbjct: 786 WSSRCKPLSAWFYVGITLVRLLPHVYDLLRAHNYVPYFRGSSFIYANPKMDFFSTAWDVI 845

Query: 862 ILFVGLLFAAIIHFQQQFGGRCLLPR 887
           I  V +L A +I  QQ++GG C +P+
Sbjct: 846 IPLVAVLLALLIFLQQRWGGACFIPK 871


This eukaryotic family of proteins has no known function. Length = 871

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 904
PF11145909 DUF2921: Protein of unknown function (DUF2921); In 100.0
PF11145 909 DUF2921: Protein of unknown function (DUF2921); In 100.0
KOG0828636 consensus Predicted E3 ubiquitin ligase [Posttrans 99.89
>PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function Back     alignment and domain information
Probab=100.00  E-value=2.9e-217  Score=1919.83  Aligned_cols=826  Identities=44%  Similarity=0.720  Sum_probs=725.5

Q ss_pred             cccCCCCCCCCCCCC-C-----CCCCCCCCCCCcceee-ecCCCCCCCCCCCcccCCcceeEEEecceeecCCCc-EEEE
Q 048368           40 YSDHCASVVPESTAT-A-----PEFASLPFLPFQNGYY-DGGDRILDPNPSEYSSNKHNLLSFHTQNVYTTNAEG-VFKF  111 (904)
Q Consensus        40 Ys~hC~s~vP~s~~t-~-----~~~~~~~~~~~~~GYF-sGGd~if~~~~~~~~~~~~rsfsf~~~~v~rT~~~~-v~~v  111 (904)
                      |++||++++|+++.. +     +...+++++++++||| +|||.||++|++.... .+|+|||+|++|+||++++ |+||
T Consensus         1 Y~~hC~svvp~a~~l~~~~~~~~~~~s~~L~~~~ggyfq~GGd~Lfp~d~s~~~~-~~r~~SF~~~~V~~T~~~~~vv~V   79 (909)
T PF11145_consen    1 YKRHCASVVPSASELKDDDDTRSLLISFELSFFNGGYFQAGGDPLFPFDDSDSPS-SLRSFSFWPTHVDRTTRPGKVVKV   79 (909)
T ss_pred             CcccccCCCCCccccccccCcccccccccccCCCCCeecCCCCCCCCCCcccccc-ccceEEEEeeeeccccCCCcEEEE
Confidence            899999999999933 1     2223333457799999 9999999999765332 3799999999999999999 9999


Q ss_pred             EEEEEEeccccCCCccccccccc--CCCccC--CCceeEEEEeceeecCCCceeeeccCCcccCCCceeec--ceEEEEc
Q 048368          112 EGNLHFYNSYHFGHGRTYGHSFF--SPLRTG--DDSALSFSLKGFWSKSSGKLCMVGSGTSYSPEGNLLHH--PAVLKLN  185 (904)
Q Consensus       112 ~atL~l~~~r~~~~~~~~~~~~~--~~~~~~--~~~s~sF~L~GfwS~ssg~LCMVGsgs~~~~~g~~~~~--~~~l~L~  185 (904)
                      +|+|+|+++|..+.++++..+++  +++...  +.++++|+||||||++||+|||||+||+++.||..+.+  ||+||||
T Consensus        80 sg~LtL~isr~~~~~~~~~~~~~~~~~~~~~~pg~ssLsf~LeG~YSe~sg~LCMVGsgs~~s~~g~~v~~~~~~vL~Lr  159 (909)
T PF11145_consen   80 SGTLTLSISRNSARSSYYYYDHRRRSPEFYRWPGRSSLSFSLEGFYSEGSGVLCMVGSGSGYSNDGPPVKLDDNAVLVLR  159 (909)
T ss_pred             EEEEEEEeecCCCCccccccccccCCcceecCCCceEEEEEEEEEEEcCCCcEEEeccccccCCCCCceeeecceEEEEc
Confidence            99999999887554444333222  222223  45799999999999999999999999999999966544  9999999


Q ss_pred             cCCCCCCcccc-------------------eEeeee-cc-ccc--------cCCCCC---c--ccccccccccccccccc
Q 048368          186 GVKDSSNITSL-------------------YTMFSK-EL-ENK--------CSGEIS---V--PAENLSLRLQVSSTICS  231 (904)
Q Consensus       186 ~p~~~s~~~~~-------------------~tlv~~-e~-~~~--------~~~~~~---~--~~~~l~~~~~~~~~~C~  231 (904)
                      +|+++|+|+++                   ++|+++ |. ++|        |++++.   +  ..++++ .++.++++|+
T Consensus       160 yPk~~sLtsr~V~G~LeS~n~~~d~~YFd~VsLls~~~~~~~Y~Y~lv~~sc~~~~~~d~~~~~~~~~~-~~~~~~~~C~  238 (909)
T PF11145_consen  160 YPKPSSLTSRFVTGELESLNSKSDSAYFDPVSLLSQLEGYSNYEYTLVSKSCDPPPYGDGDVGDGSSLS-DVYSGNFFCS  238 (909)
T ss_pred             CCCcccccccceeEEEEecCCCCCccccceeEEEecCCCccCceEEEccccCCCCcccccccccccccc-cccCCCCCCh
Confidence            99999999999                   677766 32 333        555541   1  134567 7789999999


Q ss_pred             ccccc-ccceeeeecCCCCCCCCCCCCCCCCCCCCccEEEEeEeecCCCceeEEEEEeeCCCCCcc-----cccCCCCeE
Q 048368          232 ILKRR-VNEFELEYASDCNSSTSCNPFGDAVGYLPQVMSLNTIQCSKEGQRLRFLMEFPNSSDVGY-----YRSFNPETT  305 (904)
Q Consensus       232 ~L~~~-~~~f~Ley~~~c~st~~C~Pf~~~~~~l~~~m~~~~~~C~~~~~~~r~~~vF~~~~~~~~-----~~~g~~~~t  305 (904)
                      +|.+. .++|+|||+|+|++++.|+|+++.++.++.+|+||++||+++ +++||++||+|+++.+.     .|+|++++|
T Consensus       239 ~L~~~~~~~f~l~y~~~C~st~~~~~~~gp~~~~~~~m~~~~v~C~~~-g~vrv~~vF~~~~~~e~~~~~~~r~gl~~~t  317 (909)
T PF11145_consen  239 ILRRFLRGSFKLEYNWDCNSTDACCSFGGPFGLLPVRMHMQQVRCEED-GAVRVSAVFRNVSPSEHYYPARPRTGLSNMT  317 (909)
T ss_pred             hhHhcCCCceEeEECCCCCCcccccCCCCCcccCCceEEEEeeEecCC-CcEEEEEEEcCCCchhhcccccccccccCce
Confidence            99555 678999999999999999999988887778999999999997 59999999999999442     556777999


Q ss_pred             EEEEEEEecCCCeeEEEEEeecccCCCCCCCccccCceEEEEEcCCcceeeecceEEEEEEeCCC--CCCCCCcceee--
Q 048368          306 FVAEGSWDWKKNRLCVAACRILNTHDSLDNSSVEDCSIRLTLRFPAIWSIRASTSMSGQIWSNRA--LNDTGYFGRIL--  381 (904)
Q Consensus       306 lvaEG~Wd~ssgqLCMVGC~~l~s~~s~~~~~v~dC~i~L~LrfP~~~SI~~Rs~V~G~I~S~~~--~~ds~yF~~I~--  381 (904)
                      |+|||+||+++||||||||+++++.++.+++.++||+|||+||||++|||||||+|+|+|||+++  .+++++|+.|.  
T Consensus       318 LvAEG~Wd~s~gqLCmvaCrv~~~~~s~~~~~v~dC~ir~sl~FPav~SIr~RS~v~G~I~s~~~~~~~~~~~f~~i~~~  397 (909)
T PF11145_consen  318 LVAEGVWDSSSGQLCMVACRVGNSDDSLANAGVGDCSIRMSLWFPAVWSIRQRSIVVGQIWSNSQGSSNDPLYFSRIVSP  397 (909)
T ss_pred             EEEEeeEcCCCCcEEEEeeeeccccccccccccCCCCceEEEEecCeEEEeecceEEEEEecCCccccCCCcchhheeee
Confidence            99999999999999999999999988888999999999999999999999999999999999998  88999999998  


Q ss_pred             ---ecccCccccccCCCceeecchhhcccccccCCcccccc---cCCCCCC----CccCcceeEEEEecCC-Cccccccc
Q 048368          382 ---FQSTDNEVLKVPGLKYEYTEMEKVRNMSCLQKKPLRNS---LEKYPDG----FSQEMNFGISVKISGG-KIAWGHAL  450 (904)
Q Consensus       382 ---f~s~~~~~~~~sg~~Y~YT~ve~A~k~~c~~~~p~~~k---g~~fP~~----~s~d~~f~~~L~~~~~-~~~~g~a~  450 (904)
                         |++..+....+++++|+|||+|+|+| +|.+++|.++|   +++||++    .++||+|+|+++++++ ++.+|++.
T Consensus       398 s~~~~~~~~~~~~l~~lkY~YTkvd~A~k-~~~~~~~~~~kks~~~~yP~~~~~~s~sDl~fdl~v~~s~~~~~~~g~a~  476 (909)
T PF11145_consen  398 SELFNSFGNSSSNLSGLKYNYTKVDEAKK-HCRRNEPSKFKKSLGLSYPDNLGNYSSSDLRFDLSVRNSAGPDLPSGYAS  476 (909)
T ss_pred             ccccccccccccCccCceeeeeeHHHHHH-HHHhcCCcccccccCCCCCCccccccHhhhcccEEEeccccccCCCCCcc
Confidence               77777888899999999999999999 99998876544   6899988    5899999999998876 57899999


Q ss_pred             ccccccccccCcccccccCcCCC----ccccccccccCCcceeeEEEEeccccccccCCccccccccCcccceeEEEEEe
Q 048368          451 PIAVDDQISPLSESFISWSSSST----TSSVESNISSSKPLNISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEG  526 (904)
Q Consensus       451 P~~~G~~~~~~~~~~~~~~cs~~----~~~v~~~~~~s~llnVSy~i~f~~~~~~~~~~~~~~~~~~~~~~~~~~IsAEG  526 (904)
                      |+++|+.|..+.....+...+.+    ..+..++.+.+.++||||+|+++.+.                ....++|+|||
T Consensus       477 plslG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llNVSy~i~~~~~~----------------~~~~~~isaEG  540 (909)
T PF11145_consen  477 PLSLGSLFGRGDPLSADDSFSRHAASPSSPEVTEMQHSRLLNVSYEISLSGSI----------------SSNSSQISAEG  540 (909)
T ss_pred             eEEECchhcccCccccCcccccccccccccccccccccceeEEEEEEEEcccc----------------cceEEEEEEEe
Confidence            99999999765555544443322    11223444445699999999995422                12367999999


Q ss_pred             eeeCCCCeEEEEeccccccccccCC-CCCCcceEEEEEEeCCCccccccceeEEEEEecCCCCCCCcccccccccchhh-
Q 048368          527 IYDSETGVLCMVGCRDAGLKYQKSS-NNSMDCEISIRLQFPPLNAMTKGGFIRGRITSLRNKSDSLYFEPLFVSATSYY-  604 (904)
Q Consensus       527 VYD~~tG~LCMVGCR~v~s~~~~~~-~~~~DC~I~V~vqFP~~~Sir~~~~i~G~I~S~R~~~DPl~F~~l~~~~~~~Y-  604 (904)
                      ||||+||+|||||||+++++++... |+++||+|+|+|||||+++ +.++++||+|+|+|+++|||||++++++++++| 
T Consensus       541 vYD~~~G~lclVGCR~v~~~~~~~~~~~~~DC~I~V~vq~pp~~~-~~~~~~kg~I~S~R~~~DpL~F~~~~l~~~~~~~  619 (909)
T PF11145_consen  541 VYDPKTGRLCLVGCRDVRLNWNISSNESSMDCEILVTVQFPPLDA-KVNPTIKGSISSTRDKSDPLYFEPLDLSTYPIYY  619 (909)
T ss_pred             eeeCCCCeEEEEeccccccCccccccCCCCCeeEEEEEEcCCCCC-CCCCcEEEEEEeccCCCCCccccceeeeecccee
Confidence            9999999999999999988876443 6999999999999999999 788999999999999999999999999999965 


Q ss_pred             HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCCcchHHHHHHHHHHHhhhcccccchhhhcccCCCCceee
Q 048368          605 RILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPFISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVL  684 (904)
Q Consensus       605 ~~q~~~~i~R~d~E~im~~~s~tl~c~fv~~QL~h~kk~~~~~P~iSlvML~vqaLGy~~pLvl~~EaLF~~~~~~~~~~  684 (904)
                      ++|++|+|||||||+||+++|+||+|+|+++||+|+|||||++|+||||||+|||||||+|||+||||||+.++++|++.
T Consensus       620 ~~q~~~~i~R~d~E~i~~~~s~tl~~~~~~~QL~~~k~~~~~~P~iSlvML~v~aLGy~~pLv~n~EaLf~~~~~~~~~~  699 (909)
T PF11145_consen  620 RKQAEESIWRMDLEGIMRVISLTLSCVFIGLQLFHVKKHPDVLPYISLVMLGVQALGYMIPLVLNFEALFKSSHNRQNIF  699 (909)
T ss_pred             ccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCCccchHhHHHHHHHHHhccchhhcCHHHHcCcCCCCceEE
Confidence            55999999999999999999999999999999999999999999999999999999999999999999999888899999


Q ss_pred             ecCCCcchhhhhHHHHHHHHHHHHHHHHHHHHhccccccCccCccc--cccceEEEEehhHHHhhhheeeeeeccccccc
Q 048368          685 LRSGGWLEVHEVIVRVVTMVAFLLHCRLLQHSLSRRMRDNSLKALW--TAEKKALFLTVPVYLAGALIALFVNWRTSKTG  762 (904)
Q Consensus       685 ~~~~~~~e~ne~~vr~~tlvAflL~lRLlqlvw~aR~~~~~~~~~~--~~e~~vl~~~l~~y~~G~li~l~~h~~~~~~~  762 (904)
                      +++++|+|+||++||++|||||||||||+|||||||+++++++++|  ++||||||+|+|+|++|++|+|++|+.+++.+
T Consensus       700 ~~~~~w~e~~e~~vr~ltmvAflL~lRL~qlvw~aR~~~~~~~~~~~~~sek~vl~~~l~ly~~G~li~l~~h~~~~~~~  779 (909)
T PF11145_consen  700 LDSGGWLEVNEVMVRLLTMVAFLLQLRLLQLVWSARIRDGARKPLEPWPSEKKVLYICLPLYIAGGLIALIVHASKTNSR  779 (909)
T ss_pred             eecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCccceEEEEEeHHHHHHHHHhhhhhhhccccc
Confidence            9999999999999999999999999999999999999999999988  99999999999999999999999999876432


Q ss_pred             ---cch-hccccccccchhhHHHHhhHHHhhccchhhHHHHHhhccCCCCccccceeeecceeeeccceeeeeecccccc
Q 048368          763 ---IMA-QSFLYNNHQHSLWGNLRSYAGLILDGFLLPQILLNIFHNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNYVQ  838 (904)
Q Consensus       763 ---~~~-~~~~~~~~~~~~w~~l~~y~gLv~D~FLLPQIi~N~~~~s~~kpL~~~fYvG~T~vRllph~Yd~~r~~~~~~  838 (904)
                         .+. .......+++++|+||++|+|||||||||||||+|++|++|+|||+++||+|+|++|||||+||++|+++++|
T Consensus       780 ~~~~~~~~~~~~~~~~~~~~~~l~~y~GLv~D~FLLPQii~N~~~~~~~~~Ls~~fY~G~T~~Rllph~Yd~~r~~~~~~  859 (909)
T PF11145_consen  780 RARREESYDSRISHQQHSWWEDLKSYAGLVLDGFLLPQIIGNAFWQSKVKPLSKSFYVGTTLVRLLPHVYDLYRAPNYVP  859 (909)
T ss_pred             ccccccccccccccccccHHHHHHHhhhHHHhhhhHHHHHHHHHhccCCcccccceeehHHHHHHHHHHHhhccccccCc
Confidence               111 2235677789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-cceeeeCCCCCccccccchhhhHHHHHHHHHHHHhhhhCCceecc
Q 048368          839 EFD-GLYIYADPAADIYSTGWDVAILFVGLLFAAIIHFQQQFGGRCLLP  886 (904)
Q Consensus       839 ~~~-~s~~ya~p~~dfys~awdi~Ip~~a~llA~~v~lQQr~g~~~~~p  886 (904)
                      +|+ ++|+||||++||||+||||||||+|++||++||+||||||+||+|
T Consensus       860 ~~~~~~~~ya~~~~dfys~awDi~Ip~~a~llA~~v~~QQr~~~~~~~~  908 (909)
T PF11145_consen  860 YFDDESYVYANPRMDFYSTAWDIVIPCGAVLLAALVYLQQRWGGRCILP  908 (909)
T ss_pred             ccccccccccCccccccccccceeeehHHHHHHHHHHHHhhhCCeeecc
Confidence            999 999999999999999999999999999999999999999999997



>PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function Back     alignment and domain information
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query904
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 78.0 bits (191), Expect = 1e-14
 Identities = 84/592 (14%), Positives = 182/592 (30%), Gaps = 161/592 (27%)

Query: 372 NDTGYFGRILFQSTD-NEVLKVPGLKYEYTEMEKVRNM-SCLQKKPLRNSLEKYPDGFSQ 429
            D     + +    + + ++           +     +   L  K     ++K+ +    
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSK------DAVSGTLRLFWTLLSKQ-EEMVQKFVEE-VL 87

Query: 430 EMNFGISVKISGGKIAWGHALPIAVDD-QISPLSESFISWSSSSTTSSVESNISSSKPLN 488
            +N+            +    PI  +  Q S ++  +I          + ++       N
Sbjct: 88  RINYK-----------F-LMSPIKTEQRQPSMMTRMYIE-----QRDRLYNDNQVFAKYN 130

Query: 489 ISYKISFRPYYYLKLGGLESLFNISSSWERRVAIYAEGIYDSETG----VLCMVGCRDAG 544
           +S     R   YLKL   ++L  +     + V I          G     + +  C    
Sbjct: 131 VS-----RLQPYLKL--RQALLELRP--AKNVLIDGVL------GSGKTWVALDVCLSYK 175

Query: 545 LK--------YQKSSNNSMDCEISIRLQ------FPPLNAMTKGGF-IRGRITSLRNKSD 589
           ++        +    N +    +   LQ       P   + +     I+ RI S++ +  
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 590 SLYFEPLFVSATSYYRILERRSIWRMDLELLMVLISKTLACIFVVFQLLYVKKHRDVLPF 649
            L     + +      +L   ++   + +         L+C     ++L   + + V  F
Sbjct: 236 RLLKSKPYENC---LLVL--LNVQ--NAKAWNAF---NLSC-----KILLTTRFKQVTDF 280

Query: 650 ISLLMLVILTLGHMNLLVLNFEALFFQNEYPHSVLLRSGGWL---------EVHEVIVRV 700
           +S      ++L H ++ +   E          S+LL+   +L         EV     R 
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVK--------SLLLK---YLDCRPQDLPREVLTTNPRR 329

Query: 701 VTMVAFLLH---CRL--LQHSLS---RRMRDNSLKALWTAEKKALFLTVPVYLAGALI-- 750
           ++++A  +          +H        + ++SL  L  AE + +F  + V+   A I  
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT 389

Query: 751 -ALFVNWRTSKT---GIMAQSFLYNNHQHSL---WGNLRSYAGLILDGFLLPQILLNI-F 802
             L + W         ++        H++SL        + +        +P I L +  
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKL----HKYSLVEKQPKESTIS--------IPSIYLELKV 437

Query: 803 HNSRENALSRFFYIGLTVVRLVPHAYDIYRAQNY----VQEFDGLYIY---------ADP 849
               E AL R          +V H Y+I +  +         D  Y Y          + 
Sbjct: 438 KLENEYALHR---------SIVDH-YNIPKTFDSDDLIPPYLDQ-YFYSHIGHHLKNIEH 486

Query: 850 A--ADIYSTGWDVAILFVGLLF--AAIIHFQQQFGGRCLLPRRFRELEVYEK 897
                ++        +F+   F    I H    +     +    ++L+ Y+ 
Sbjct: 487 PERMTLFRM------VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00