Citrus Sinensis ID: 048655


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MTDGYYSSKKTDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH
ccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHEEEEEEEcEEEEEccccccccccccccccccccccccHHHHHHHccccccccccEEEEEEEcccHHHHHHHHHHHHcccccEEEEEEEccccccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHcccccccEEEEEEEEEEEEEEEEcccccccEEEEEEcccccccccccccccccccccc
cccccccccccccccccccccccccHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccccccccHHHHHHHccccccccccEEEEEEEEccHHHHHHHHHHHHHHHccEEEEEEccccccccccccEHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHcccccccEEEEEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEcccccc
mtdgyysskktddiceDVCGQASRVGLTMSRLRCmlrgfdlkTLFFVFVFIPVFIFGIYLHGQKISyflrplwesppkpfikiphyyhenvtMERLCKLhgwgiresprRVFDAVLFSTEEDILTIRWKELYPFITQFVLLesnstftglpkplffasnrhkfkfveprltygmiggrfkkgenpfvEEAYQRVALDQLLRIagiedddllimsdvdeipsahtinllrwcddipsilHLQLRNYLYSFEYFvdnnswrasvhqykrgktryahyrqtdllfsdagwh
mtdgyysskktddicedVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLffasnrhkfkfvEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTdllfsdagwh
MTDGYYSSKKTDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLffvfvfipvfifgiYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH
************DICEDVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFS*****
**********TDDICED****************CMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH
**********TDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH
**********TDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSD*GW*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTDGYYSSKKTDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query288 2.2.26 [Sep-21-2011]
Q02527 538 Beta-1,4-mannosyl-glycopr yes no 0.531 0.284 0.308 1e-11
Q09327 533 Beta-1,4-mannosyl-glycopr yes no 0.531 0.287 0.308 2e-11
Q10470 538 Beta-1,4-mannosyl-glycopr yes no 0.531 0.284 0.302 4e-11
>sp|Q02527|MGAT3_RAT Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat3 PE=1 SV=2 Back     alignment and function desciption
 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 19/172 (11%)

Query: 87  YHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNST 146
           Y    T ERL        RE PRRV +A+  + E D+L +R+ EL   +  FV+ ESN T
Sbjct: 194 YSNLPTKERLVP------REVPRRVINAININHEFDLLDVRFHELGDVVDAFVVCESNFT 247

Query: 147 FTGLPKPLFFAS--NRHKFKFVEPRLTYGMI-----GGRFKKGENPFVEEAYQRVAL--D 197
             G P+PL F        F+++  ++ Y  +     GGR    ++ ++ + Y R  L  D
Sbjct: 248 AYGEPRPLKFREMLTNGTFEYIRHKVLYVFLDHFPPGGR----QDGWIADDYLRTFLTQD 303

Query: 198 QLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSF 249
            + R+  +  DD+ I+ D DEIP+   +  L+  D         +R  LY F
Sbjct: 304 GVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGF 355




It is involved in the regulation of the biosynthesis and biological function of glycoprotein oligosaccharides. Catalyzes the addition of N-acetylglucosamine in beta 1-4 linkage to the beta-linked mannose of the trimannosyl core of N-linked sugar chains. It is one of the most important enzymes involved in the regulation of the biosynthesis of glycoprotein oligosaccharides.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 4
>sp|Q09327|MGAT3_HUMAN Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Homo sapiens GN=MGAT3 PE=2 SV=3 Back     alignment and function description
>sp|Q10470|MGAT3_MOUSE Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Mus musculus GN=Mgat3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
359488819386 PREDICTED: beta-1,4-mannosyl-glycoprotei 1.0 0.746 0.829 1e-143
296087591 412 unnamed protein product [Vitis vinifera] 1.0 0.699 0.826 1e-142
255560942387 acetylglucosaminyltransferase, putative 1.0 0.744 0.826 1e-142
449450064386 PREDICTED: beta-1,4-mannosyl-glycoprotei 1.0 0.746 0.802 1e-140
296081354 671 unnamed protein product [Vitis vinifera] 0.986 0.423 0.823 1e-138
297815018 390 glycosyl transferase family 17 protein [ 1.0 0.738 0.777 1e-138
225424663 393 PREDICTED: beta-1,4-mannosyl-glycoprotei 0.986 0.722 0.823 1e-138
15232194 390 beta-1,4-mannosyl-glycoprotein [Arabidop 1.0 0.738 0.770 1e-137
356570564387 PREDICTED: beta-1,4-mannosyl-glycoprotei 1.0 0.744 0.788 1e-136
15241413387 beta-1,4-mannosyl-glycoprotein [Arabidop 1.0 0.744 0.778 1e-136
>gi|359488819|ref|XP_002272340.2| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 239/288 (82%), Positives = 261/288 (90%)

Query: 1   MTDGYYSSKKTDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYL 60
           M DGYYSSKKTDDICEDVCGQAS   L+M+RLRC+LRG DLKT   + V +P F FG+YL
Sbjct: 1   MADGYYSSKKTDDICEDVCGQASHGALSMTRLRCILRGLDLKTYILLIVIVPTFFFGVYL 60

Query: 61  HGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTE 120
           HGQKISYFLRPLWESPPKPFI+IPHYYHE+V M  LC+LHGWGIRESPRRVFDAVLFS E
Sbjct: 61  HGQKISYFLRPLWESPPKPFIEIPHYYHEDVPMANLCRLHGWGIRESPRRVFDAVLFSNE 120

Query: 121 EDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFK 180
            DILTIRWKELYP++TQ VLLESNSTFTGLPKPL F+ NR KFKF+EPRLTYG IGGRFK
Sbjct: 121 VDILTIRWKELYPYVTQVVLLESNSTFTGLPKPLLFSKNRDKFKFIEPRLTYGTIGGRFK 180

Query: 181 KGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHL 240
           KGENPFVEEAYQRVALDQLL+IAGI+DDDLLIMSDVDEIPS+HTINLLRWCDDIP ILHL
Sbjct: 181 KGENPFVEEAYQRVALDQLLKIAGIDDDDLLIMSDVDEIPSSHTINLLRWCDDIPPILHL 240

Query: 241 QLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH 288
           +LRNYLYSFE+F+DN SWRASVH+Y+ GKTRYAHYRQTD + SDAGWH
Sbjct: 241 RLRNYLYSFEFFLDNKSWRASVHRYQIGKTRYAHYRQTDYVLSDAGWH 288




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087591|emb|CBI34847.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255560942|ref|XP_002521484.1| acetylglucosaminyltransferase, putative [Ricinus communis] gi|223539383|gb|EEF40974.1| acetylglucosaminyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449450064|ref|XP_004142784.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Cucumis sativus] gi|449483790|ref|XP_004156692.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296081354|emb|CBI16787.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297815018|ref|XP_002875392.1| glycosyl transferase family 17 protein [Arabidopsis lyrata subsp. lyrata] gi|297321230|gb|EFH51651.1| glycosyl transferase family 17 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225424663|ref|XP_002285541.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Vitis vinifera] Back     alignment and taxonomy information
>gi|15232194|ref|NP_189391.1| beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] gi|11994181|dbj|BAB01284.1| unnamed protein product [Arabidopsis thaliana] gi|20466726|gb|AAM20680.1| unknown protein [Arabidopsis thaliana] gi|23198206|gb|AAN15630.1| unknown protein [Arabidopsis thaliana] gi|332643814|gb|AEE77335.1| beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356570564|ref|XP_003553455.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|15241413|ref|NP_196952.1| beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] gi|7573473|emb|CAB87787.1| putative protein [Arabidopsis thaliana] gi|53850467|gb|AAU95410.1| At5g14480 [Arabidopsis thaliana] gi|55167912|gb|AAV43788.1| At5g14480 [Arabidopsis thaliana] gi|332004656|gb|AED92039.1| beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
TAIR|locus:2091448 390 AT3G27540 [Arabidopsis thalian 1.0 0.738 0.75 7e-125
TAIR|locus:2145733387 AT5G14480 [Arabidopsis thalian 1.0 0.744 0.754 6.5e-122
TAIR|locus:2084173388 AT3G01620 [Arabidopsis thalian 1.0 0.742 0.727 1.2e-115
TAIR|locus:2031800392 AT1G12990 [Arabidopsis thalian 0.989 0.727 0.715 5e-115
TAIR|locus:2200191390 AT1G67880 [Arabidopsis thalian 0.979 0.723 0.716 5.9e-112
TAIR|locus:2042280361 AT2G13290 [Arabidopsis thalian 0.784 0.626 0.582 3.5e-75
TAIR|locus:504955860118 AT3G26445 [Arabidopsis thalian 0.232 0.567 0.731 3.6e-27
RGD|3084 538 Mgat3 "mannosyl (beta-1,4-)-gl 0.590 0.315 0.301 9e-12
UNIPROTKB|Q09327 533 MGAT3 "Beta-1,4-mannosyl-glyco 0.590 0.318 0.301 1.2e-11
UNIPROTKB|E1BJA5 536 MGAT3 "Uncharacterized protein 0.590 0.317 0.301 1.2e-11
TAIR|locus:2091448 AT3G27540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
 Identities = 216/288 (75%), Positives = 251/288 (87%)

Query:     1 MTDGYYSSKKTDDICEDVCGQASRVGLTMSRLRCMLRGFDLKTLXXXXXXXXXXXXXXYL 60
             M+DGY +SKKTDDICEDVCGQ S+   T+SRL+C+L+GFDL+T               YL
Sbjct:     1 MSDGYINSKKTDDICEDVCGQGSKAAKTISRLKCVLKGFDLRTYLFLFVLMPFGILAIYL 60

Query:    61 HGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTE 120
             HGQK +YF RPLWESPPKPF  IPHYY+ENVTME LC LHGWGIR+SPRRVFDAVLFS E
Sbjct:    61 HGQKFTYFFRPLWESPPKPFQTIPHYYNENVTMESLCSLHGWGIRDSPRRVFDAVLFSNE 120

Query:   121 EDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFK 180
             +D+LT+RW ELYP++TQFV+LESNSTFTGLPKPL F SN+ +FKFVEPRLTYG IGGRF+
Sbjct:   121 KDLLTVRWNELYPYVTQFVILESNSTFTGLPKPLVFKSNKDQFKFVEPRLTYGTIGGRFR 180

Query:   181 KGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHL 240
             KGENPFVEEAYQRVALDQLLRIAGI++DDLLIMSDVDEIPSAHTINLLRWCDDIP +LHL
Sbjct:   181 KGENPFVEEAYQRVALDQLLRIAGIQEDDLLIMSDVDEIPSAHTINLLRWCDDIPPVLHL 240

Query:   241 QLRNYLYSFEYFVDNNSWRASVHQYKRGKTRYAHYRQTDLLFSDAGWH 288
             QL+NYLYSFEY+VD+ SWRAS+H+Y  GKTRYAH+RQ++++ +D+GWH
Sbjct:   241 QLKNYLYSFEYYVDSKSWRASIHRYSPGKTRYAHFRQSNVMLADSGWH 288




GO:0003830 "beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006487 "protein N-linked glycosylation" evidence=IEA
GO:0008375 "acetylglucosaminyltransferase activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
TAIR|locus:2145733 AT5G14480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084173 AT3G01620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031800 AT1G12990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200191 AT1G67880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042280 AT2G13290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955860 AT3G26445 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|3084 Mgat3 "mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q09327 MGAT3 "Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJA5 MGAT3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.144LOW CONFIDENCE prediction!
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00020645001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (387 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00029100001
SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (480 aa)
       0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
pfam04724357 pfam04724, Glyco_transf_17, Glycosyltransferase fa 1e-154
>gnl|CDD|218230 pfam04724, Glyco_transf_17, Glycosyltransferase family 17 Back     alignment and domain information
 Score =  433 bits (1116), Expect = e-154
 Identities = 189/264 (71%), Positives = 212/264 (80%), Gaps = 5/264 (1%)

Query: 26  GLTMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPH 85
            L +SRL+C LRG  L     +FV +P  + GIY HGQKISYF RPLWE PPKPF  IPH
Sbjct: 1   ALGISRLKCRLRGLFL----PLFVLMPTCLLGIYKHGQKISYFCRPLWEGPPKPFCGIPH 56

Query: 86  YYHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNS 145
           YY+ENV+ME LCKLHGWG RE+PRRVFDAVLFS E D+L +RW ELYP++ QFVLLESNS
Sbjct: 57  YYYENVSMENLCKLHGWGPRETPRRVFDAVLFSNEFDLLEVRWHELYPYVDQFVLLESNS 116

Query: 146 TFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGE-NPFVEEAYQRVALDQLLRIAG 204
           TFTGLPKPL+F  NR +FKFVE ++ YG I G  KKG  NPF+EEAYQRVALD LLRIAG
Sbjct: 117 TFTGLPKPLYFLENRGRFKFVESKILYGFIDGFPKKGRKNPFIEEAYQRVALDGLLRIAG 176

Query: 205 IEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQ 264
           I DDD+LIMSD DEIPS HTIN L+WCD IP +LHL LRNYLYSFEY VD  SWRASVH+
Sbjct: 177 IRDDDVLIMSDADEIPSRHTINFLKWCDGIPEVLHLHLRNYLYSFEYPVDGKSWRASVHR 236

Query: 265 YKRGKTRYAHYRQTDLLFSDAGWH 288
           Y  GKTRYAHYRQTD + +DAGWH
Sbjct: 237 YMPGKTRYAHYRQTDHILADAGWH 260


This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression. Length = 357

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 288
PF04724356 Glyco_transf_17: Glycosyltransferase family 17; In 100.0
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 95.73
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 92.97
TIGR01556 281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 85.63
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 85.09
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 80.53
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2 Back     alignment and domain information
Probab=100.00  E-value=2.5e-87  Score=642.31  Aligned_cols=257  Identities=55%  Similarity=1.073  Sum_probs=248.1

Q ss_pred             ccccceeeeecCchhHHHHHHHHhhhheeeeEeeceeEeeecCCCCCCCCCCCCCcceEeccCccHHhHHHhcCccccCC
Q 048655           28 TMSRLRCMLRGFDLKTLFFVFVFIPVFIFGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVTMERLCKLHGWGIRES  107 (288)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~W~~p~~p~~~iP~~y~~~~~~~~~c~~hgw~~r~~  107 (288)
                      +|||++|++|++    ++++++++|+|+++++.++++++|+|||+|||||+|||+|||||+++.+|+++|++|||++|++
T Consensus         2 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~rp~w~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~R~~   77 (356)
T PF04724_consen    2 SMSRRRCILRGL----FLFLFVLLPLCVIGVYQHGQSISCFCRPGWHGPPDPFCGIPHYYWESVSMSNLCQLHGWKPRKT   77 (356)
T ss_pred             cchhHHHHHHHH----HHHHHHHHHHHhheeeecCceeEEeccCccCCCCCCCCCCCcceeecchhhhcccccCCCcCCC
Confidence            688999999986    6779999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEEecCChHHHHHHHHHHhcccccEEEEEEeCCCccCCCccccchhchhcccccCCCEEEEEeCCccCCCC-Cch
Q 048655          108 PRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGE-NPF  186 (288)
Q Consensus       108 pRkIyD~flfs~ElDlLEIRL~EL~dvVD~FVIvESn~TFtG~pKpL~f~~n~~rF~~~~~KIiy~~l~~~~~~~~-~~w  186 (288)
                      ||||||||+||+|+|||||||+||+|+||+|||||||.||||.||||+|.+|+++|+++++||+|+++++.+..+. ++|
T Consensus        78 pRrV~D~~~f~~ElDlLeiRl~eL~~vVD~FVIvEs~~Tf~G~~KpL~f~~~~~~f~~~~~KIiy~~l~~~~~~g~~~~w  157 (356)
T PF04724_consen   78 PRRVYDCFLFNNELDLLEIRLNELYDVVDYFVIVESNRTFTGKPKPLYFAENKERFAFFHDKIIYVTLDDPPEKGRKDPW  157 (356)
T ss_pred             CCeEEEEEEeCChHHHHHHHHHHhhCcceEEEEEEECCCcCCCCCCccHHHHHHHHHhhhcceEEEEecCcCCCCCCchh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998766554 999


Q ss_pred             hhHHHHHHHHHHHHHHcCCCCCcEEEeeCCCcCCCHHHHHHHHhcCCCCcceEEEeeeeeeeEEeeeCCCceeeeEEEee
Q 048655          187 VEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSFEYFVDNNSWRASVHQYK  266 (288)
Q Consensus       187 ~~E~~qRn~l~~~lr~~~~~~dDlIIvSDvDEIP~~~tl~~Lr~cdg~p~~~~l~lr~y~YsF~~~~~~~~W~~~a~~y~  266 (288)
                      ++|++|||+|.++++.+|+++|||||+|||||||+|++|++||+|||+|++++|+||+|||||+|++++++|+++++.|.
T Consensus       158 ~~E~~qR~~l~~l~~~~~~~~dDliivSDvDEIP~p~~l~~Lr~cd~~p~~l~l~lr~y~YsF~~~~~~~~~r~~~~~~~  237 (356)
T PF04724_consen  158 DRENYQRNALNGLLRLAGIQDDDLIIVSDVDEIPSPETLKFLRWCDGFPEPLHLRLRFYYYSFQFQHDGKSWRASVHTYS  237 (356)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCCCEEEEcCcccccCHHHHHHHHhcCCCCCeeEEEeeceEEEEEEecCCcchhhhhhhhc
Confidence            99999999998888889999999999999999999999999999999999999999999999999999999999988887


Q ss_pred             cCccccccccccccccCCCCCC
Q 048655          267 RGKTRYAHYRQTDLLFSDAGWH  288 (288)
Q Consensus       267 ~~~t~y~~~r~~d~~ladaGWH  288 (288)
                      .+.+.|+|+|+++.+|+|||||
T Consensus       238 ~~~~~~~~~r~~~~il~daGWH  259 (356)
T PF04724_consen  238 QGMRRYRHSRQSDHILADAGWH  259 (356)
T ss_pred             cccchhhhhcccCccccCCcee
Confidence            7888999999999999999999



4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 52/321 (16%), Positives = 90/321 (28%), Gaps = 94/321 (29%)

Query: 48  FVFIPVFIFGIY--------------LHGQKISYFLRPLWESPPKPFIKIPHYYHENVTM 93
           +       F I+                 QK+ Y + P W S       I    H     
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS--IQ 231

Query: 94  ERLCKLHGWGIRESPR-----------RVFDAVLFS--TEEDILTIRWKELYPFI----- 135
             L +L     +               + ++A   S      +LT R+K++  F+     
Sbjct: 232 AELRRL--LKSKPYENCLLVLLNVQNAKAWNAFNLSCKI---LLTTRFKQVTDFLSAATT 286

Query: 136 TQFVLLESNSTFTGLPKPL-FFASNRHKFKFVEPR-------LTYGMIGGRFKKGENPFV 187
           T   L   + T T   +                PR           +I    + G   + 
Sbjct: 287 THISLDHHSMTLT-PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW- 344

Query: 188 EEAYQRVALDQLLRI--AGIED----------DDLLIM-SDVDEIPSAHTINLLRWCDDI 234
            + ++ V  D+L  I  + +            D L +       IP+   ++L+ W D I
Sbjct: 345 -DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH-IPTI-LLSLI-WFDVI 400

Query: 235 P-------------SILHLQLRNYLYS-----FEYFVDNNSWRASVH-----QYKRGKTR 271
                         S++  Q +    S      E  V   +   ++H      Y   KT 
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN-EYALHRSIVDHYNIPKTF 459

Query: 272 YAHYRQTDLL----FSDAGWH 288
            +       L    +S  G H
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHH 480


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00