Citrus Sinensis ID: 048760

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVLGFHC
Secondary Structure (PSIPRED)
cccccccccccccccccEEHHHHHHHHHHHHHHHHHHHEEEEEEccccEEEEEEEEEcEEEcccccEEEEEEEEEEEEccccEEEEEEccEEEEEEccEEEEEEEccccEEccccEEEEEEEEEEEEEEEEccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccEEccccEEEEEEEEEEEEEccccccEEEcccEEEEEEcccEEEEEEcccccccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEEEcccEEEcccc
Coil and Loop (DISEMBL)
mskpntnrrpsgsgrtnlASCIVATIFLIFVVIVILIVFFTvfkpkepkisvtsiqlpsfsisnntvnfTFSQYvtiknpnkaafshyDSTIQLIYsgsqvgfmfipagkiaagQTQYMAATFAvqsfpistaagasalvgapvtpsgfpgaglpnngfrvgptmqiesrmdmSGRVRVLHFFTHHvnakagcrveisvndgsvlgfhc
Flexible Loop (DISEMBL)
mskpntnrrpsgsgrtNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHvnakagcrveiSVNDGSVLGFHC
Low Complexity Region (SEG)
MSKPNTNRRPSGSGRTNLASCIVAtiflifvvivilivfftvfKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVLGFHC
Disordered region (IsUnstruct)
****************NLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPT**I***MDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVLG***
Disordered Region (DISOPRED)
*******************SCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGA***************AGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRVEISVNDG*VLGFHC
Disordered Region (DISEMBL)
**************RTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVLGFHC
Disordered Region (DISPRO)
**************RTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVL***C
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVLGFHC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
255537817	205	conserved hypothetical protein [Ricinus	0.980	1.0	0.765	2e-76
449462527	200	PREDICTED: uncharacterized protein LOC10	0.956	1.0	0.669	3e-68
356513281	213	PREDICTED: uncharacterized protein LOC10	0.909	0.892	0.695	4e-67
356527680	209	PREDICTED: uncharacterized protein LOC10	0.909	0.909	0.705	5e-67
224053773	207	predicted protein [Populus trichocarpa]	0.980	0.990	0.715	6e-67
356497331	209	PREDICTED: uncharacterized protein LOC10	0.909	0.909	0.612	1e-66
225426306	194	PREDICTED: uncharacterized protein LOC10	0.928	1.0	0.693	1e-66
356540396	178	PREDICTED: uncharacterized protein LOC10	0.851	1.0	0.578	8e-62
225470908	194	PREDICTED: uncharacterized protein LOC10	0.913	0.984	0.603	1e-58
357481381	187	hypothetical protein MTR_5g009130 [Medic	0.837	0.935	0.582	3e-57

>gi|255537817|ref|XP_002509975.1| conserved hypothetical protein [Ricinus communis] gi|223549874|gb|EEF51362.1| conserved hypothetical protein [Ricinus communis]

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 160/209 (76%), Positives = 183/209 (87%), Gaps = 4/209 (1%)

Query: 1   MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
           MSKP+   RP  SGRTNLASCIVATIFLIFV+I+ILIVFFTVFKPK+PKISV ++QLPSF
Sbjct: 1   MSKPH---RPP-SGRTNLASCIVATIFLIFVIIIILIVFFTVFKPKDPKISVNAVQLPSF 56

Query: 61  SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
           S+SNNTVNFTFSQYV++KNPN+A FSHYDST+QL+YSGSQVGFMFIPAGKI +G+TQYMA
Sbjct: 57  SVSNNTVNFTFSQYVSVKNPNRATFSHYDSTLQLLYSGSQVGFMFIPAGKIESGRTQYMA 116

Query: 121 ATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVL 180
           ATFAVQSFP+S++  A+  VG   T SGFPG    +NGFRVGPTM+IESR+ M GRVRVL
Sbjct: 117 ATFAVQSFPLSSSPDAAVNVGPAFTGSGFPGVPGSSNGFRVGPTMEIESRIQMVGRVRVL 176

Query: 181 HFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
           H FTHHV AKA CRV I+V+DGSVLGFHC
Sbjct: 177 HIFTHHVEAKAECRVAIAVSDGSVLGFHC 205

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462527|ref|XP_004148992.1| PREDICTED: uncharacterized protein LOC101209064 [Cucumis sativus] gi|449506186|ref|XP_004162677.1| PREDICTED: uncharacterized LOC101209064 [Cucumis sativus]

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/209 (66%), Positives = 175/209 (83%), Gaps = 9/209 (4%)

Query: 1   MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
           M  P+ +     SGRTNLASC+VAT+FLIF++IVILIVFFTVFKP++PKI+V+++QLPSF
Sbjct: 1   MGNPHGHGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSF 60

Query: 61  SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
           S++N T+NFTFSQYV++KNPNKA+FSHYDS++QL+YSGSQ+GFMFIPAGKI AGQTQYMA
Sbjct: 61  SVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMA 120

Query: 121 ATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVL 180
           ATF+VQSFP+  AA  +++   P    G        NG+RVGP ++IES+MDM+GRVRVL
Sbjct: 121 ATFSVQSFPL--AAPVASVGAGPTFSEGM-------NGYRVGPILEIESKMDMAGRVRVL 171

Query: 181 HFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
           HFFTHHV A + CRV I+V+DGSVLGFHC
Sbjct: 172 HFFTHHVEATSSCRVAIAVSDGSVLGFHC 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513281|ref|XP_003525342.1| PREDICTED: uncharacterized protein LOC100812014 [Glycine max]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 137/197 (69%), Positives = 168/197 (85%), Gaps = 7/197 (3%)

Query: 13  SGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFS 72
           SGRTNLASC+VATIFLIF++IVILIV++TVFKP++PKI+V ++QLPSFS++N TVNFTFS
Sbjct: 24  SGRTNLASCVVATIFLIFIIIVILIVYYTVFKPQDPKIAVNAVQLPSFSVANGTVNFTFS 83

Query: 73  QYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPIST 132
           QY +++NPN+AAF+HYDS++QLIYSGSQVGFMFIPAG+I AG+TQYMAATF+VQSFP+S 
Sbjct: 84  QYASVRNPNRAAFTHYDSSLQLIYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSV 143

Query: 133 AAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAG 192
                     P   +G  G G  N G RV PTM+IES+++M+GRV+VLHFFTHHV AKAG
Sbjct: 144 PPRM-----GPTLANG-DGVGF-NYGLRVEPTMEIESKLEMAGRVKVLHFFTHHVYAKAG 196

Query: 193 CRVEISVNDGSVLGFHC 209
           CRV I+V DGSVLGFHC
Sbjct: 197 CRVAIAVTDGSVLGFHC 213

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527680|ref|XP_003532436.1| PREDICTED: uncharacterized protein LOC100782341 [Glycine max]

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 139/197 (70%), Positives = 171/197 (86%), Gaps = 7/197 (3%)

Query: 13  SGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFS 72
           SGRTNLASC+VATIFLIF+VIVILIV++T+FKP++PKI+V ++QLPSFS++N TVNFTFS
Sbjct: 20  SGRTNLASCVVATIFLIFIVIVILIVYYTIFKPQDPKIAVNAVQLPSFSVANGTVNFTFS 79

Query: 73  QYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPIST 132
           QY +++NPN+AAFSHYDS++QLIYSGSQVGFMFIPAG+I AG+TQYMAATF+VQSFP+S 
Sbjct: 80  QYASVRNPNRAAFSHYDSSLQLIYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLS- 138

Query: 133 AAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAG 192
              A   +G P   +G  G G  N G RV PT++IES+++M+GRV+VLHFFTHHV AKAG
Sbjct: 139 ---APPRMG-PTLANG-DGVGF-NYGLRVEPTLEIESKLEMAGRVKVLHFFTHHVYAKAG 192

Query: 193 CRVEISVNDGSVLGFHC 209
           CRV I+V DGSVLGFHC
Sbjct: 193 CRVAIAVTDGSVLGFHC 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053773|ref|XP_002297972.1| predicted protein [Populus trichocarpa] gi|222845230|gb|EEE82777.1| predicted protein [Populus trichocarpa]

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 151/211 (71%), Positives = 178/211 (84%), Gaps = 6/211 (2%)

Query: 1   MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
           MSKP+   RP  SGRTN+ASCIVATIFLIFVVI+ILIVFFTVFKPK+PKISV ++QLPSF
Sbjct: 1   MSKPH---RPP-SGRTNIASCIVATIFLIFVVIIILIVFFTVFKPKDPKISVNAVQLPSF 56

Query: 61  SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
           ++SNNTVNFTFSQYV++KNPN+A FSHYDST+QL+YS SQVGFMFIPAGKI AG+TQYMA
Sbjct: 57  AVSNNTVNFTFSQYVSVKNPNRAVFSHYDSTLQLLYSSSQVGFMFIPAGKIDAGRTQYMA 116

Query: 121 ATFAVQSFPISTAAGASALVGAPV--TPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVR 178
           AT++V+SFP+S +  A+  VG+       G  G    NNGFRVGPTM+IESR+ ++GRVR
Sbjct: 117 ATYSVESFPLSASPDAAVNVGSAFHDGGFGGGGQPGFNNGFRVGPTMEIESRIHIAGRVR 176

Query: 179 VLHFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
           VLHFFTHH+  K  CRV ISV+DGSVLGFHC
Sbjct: 177 VLHFFTHHLETKVRCRVTISVSDGSVLGFHC 207

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497331|ref|XP_003517514.1| PREDICTED: uncharacterized protein LOC100820289 [Glycine max]

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 161/209 (77%), Gaps = 19/209 (9%)

Query: 2   SKPNTNRRPSG-SGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
           S  NT R  +    RTNLASC VAT+FLIF++IV+ IV+FTVFKP+ PKI+V++IQ+PSF
Sbjct: 19  SHSNTERAMAKPENRTNLASCFVATVFLIFLLIVVFIVYFTVFKPQYPKIAVSAIQIPSF 78

Query: 61  SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
           S +N TVNFTFSQY +++NPN+  FSHYDS++QL+Y G QVGFMF+PAGKIAAG+TQYMA
Sbjct: 79  SATNGTVNFTFSQYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIAAGRTQYMA 138

Query: 121 ATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVL 180
           ATF VQSFP+    G +++ G    PS             VGPTM++ESR++M+GRVRVL
Sbjct: 139 ATFTVQSFPL--GLGPTSVDG----PSS------------VGPTMEMESRIEMAGRVRVL 180

Query: 181 HFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
           H F+HHV AKA CRV I++NDGSVLGF C
Sbjct: 181 HLFSHHVEAKAQCRVAIAINDGSVLGFRC 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426306|ref|XP_002268138.1| PREDICTED: uncharacterized protein LOC100244412 [Vitis vinifera]

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/209 (69%), Positives = 173/209 (82%), Gaps = 15/209 (7%)

Query: 1   MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
           M KP   +RP  SGRTNLASC+VATIFLIF++IV+LIVFF+VFKPKEP ISV ++QLPSF
Sbjct: 1   MVKP---QRPP-SGRTNLASCVVATIFLIFIIIVVLIVFFSVFKPKEPIISVNAVQLPSF 56

Query: 61  SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
           +ISN TVNFTFSQYV++KNPNKA FSHYDST+QL+Y G+QVGFMFIPAGKI +G+TQYMA
Sbjct: 57  AISNGTVNFTFSQYVSVKNPNKAEFSHYDSTLQLLYGGNQVGFMFIPAGKIGSGRTQYMA 116

Query: 121 ATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVL 180
           ATFAV+SFP+         V   V P+   G G    GFR+GP ++IESRM+M+GRVRVL
Sbjct: 117 ATFAVESFPLGA-------VPESVGPTITDGLG----GFRIGPNLEIESRMEMAGRVRVL 165

Query: 181 HFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
           HFFTHHV+A+A CRV I+V+DGSVLGFHC
Sbjct: 166 HFFTHHVDARAVCRVSIAVSDGSVLGFHC 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540396|ref|XP_003538675.1| PREDICTED: uncharacterized protein LOC100776169 [Glycine max]

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 121/209 (57%), Positives = 153/209 (73%), Gaps = 31/209 (14%)

Query: 1   MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
           M+KP +        RTNLASC VATIFLIF++IV+ IV+FTVFKP++PKI+V+++Q+PSF
Sbjct: 1   MAKPES--------RTNLASCFVATIFLIFLLIVVFIVYFTVFKPQDPKIAVSAVQIPSF 52

Query: 61  SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
           S +N TVNFTFSQY +++NPN+  FSHYDS++QL+Y G QVGFMF+PAG+     TQYMA
Sbjct: 53  SATNGTVNFTFSQYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGR-----TQYMA 107

Query: 121 ATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVL 180
           ATF VQSFP+                 G P    P+N   VGPTM+IESR++M+GRVRVL
Sbjct: 108 ATFTVQSFPLGL---------------GPPFVDGPSN---VGPTMEIESRIEMAGRVRVL 149

Query: 181 HFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
           H F+ HV AKA CRV I++ DGSVLGF C
Sbjct: 150 HLFSRHVEAKAQCRVAIAITDGSVLGFRC 178

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470908|ref|XP_002263581.1| PREDICTED: uncharacterized protein LOC100250204 [Vitis vinifera]

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/207 (60%), Positives = 158/207 (76%), Gaps = 16/207 (7%)

Query: 5   NTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISN 64
           N  RRP   GRTNLASCIVAT+FL+  V VI+IV+  VFKPK+PKI+V +++ P+FSISN
Sbjct: 2   NEPRRP---GRTNLASCIVATVFLVLAVAVIVIVYLCVFKPKDPKIAVHAMRFPTFSISN 58

Query: 65  NTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFA 124
            TV+FTFSQYV +KNPN+ AF+HYDS++QL+YSGS+VGFMFIPAGKI AG+TQYM ATFA
Sbjct: 59  GTVDFTFSQYVAVKNPNRDAFTHYDSSVQLVYSGSEVGFMFIPAGKIDAGRTQYMLATFA 118

Query: 125 VQSFPISTA--AGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHF 182
           V+SFP++ A  +G +AL             G+   G  + PTM+IESRM + GRVRVL F
Sbjct: 119 VKSFPVTQAPLSGVTAL-----------NDGVGGVGMGMEPTMEIESRMKLVGRVRVLWF 167

Query: 183 FTHHVNAKAGCRVEISVNDGSVLGFHC 209
           FTH V+++  C V I V++GSVLGFHC
Sbjct: 168 FTHTVDSRVSCSVAIEVSNGSVLGFHC 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481381|ref|XP_003610976.1| hypothetical protein MTR_5g009130 [Medicago truncatula] gi|355512311|gb|AES93934.1| hypothetical protein MTR_5g009130 [Medicago truncatula]

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 116/199 (58%), Positives = 151/199 (75%), Gaps = 24/199 (12%)

Query: 13  SGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNN--TVNFT 70
           S RTNLASC+VAT+FLIF++I+I  ++FT+FKP++PKISVT++QLPSF+++NN  TVNFT
Sbjct: 11  SNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFT 70

Query: 71  FSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPI 130
           FSQY ++KNPN+  FSHYDS+ QL+  G Q+GFMF+PAGKI A +TQ+MAATF VQS P+
Sbjct: 71  FSQYTSVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQFMAATFTVQSLPL 130

Query: 131 STAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAK 190
           +                      L   G ++GPT++IES ++M GRVRVLH F+HHV AK
Sbjct: 131 N----------------------LEPEGLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAK 168

Query: 191 AGCRVEISVNDGSVLGFHC 209
           A CRV I+V+DGSVLGFHC
Sbjct: 169 ADCRVAIAVSDGSVLGFHC 187

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
TAIR|locus:2014250	342	AT1G64450 [Arabidopsis thalian	0.712	0.435	0.577	4.8e-62
TAIR|locus:2138136	187	AT4G23930 "AT4G23930" [Arabido	0.870	0.973	0.453	1.5e-42
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.397	0.353	0.318	1.7e-08

TAIR|locus:2014250 AT1G64450 [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
 Identities = 89/154 (57%), Positives = 108/154 (70%)

Query:     1 MSKPNTNRRPSGSGRTNLASCIVAXXXXXXXXXXXXXXXXXXXKPKEPKISVTSIQLPSF 60
             M+KP+  RR   SGRTNLASC VA                   KPK+PKISV ++QLPSF
Sbjct:     1 MAKPHDRRR--SSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSF 58

Query:    61 SISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMA 120
             ++SNNT NF+FSQYV ++NPN+A FSHYDS+IQL+YSG+QVGFMFIPAGKI +G+ QYMA
Sbjct:    59 AVSNNTANFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMA 118

Query:   121 ATFAVQSFPIST-AAGASALVGAPVTPSG--FPG 151
             ATF V SFPIS  ++ A + V A V P     PG
Sbjct:   119 ATFTVHSFPISPPSSSAISTVSAAVIPDSPIIPG 152

GO:0005576 "extracellular region" evidence=ISM

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

TAIR|locus:2138136 AT4G23930 "AT4G23930" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 88/194 (45%), Positives = 133/194 (68%)

Query:    16 TNLASCIVAXXXXXXXXXXXXXXXXXXXKPKEPKISVTSIQLPSFSISNNTVNFTFSQYV 75
             +NLASC VA                   +P++P+ISVTS+++PSFS++N++V+FTFSQ+ 
Sbjct:     6 SNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFS 65

Query:    76 TIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAG 135
              ++NPN+AAFSHY++ IQL Y G+++G+ F+PAG+I +G+T+ M ATF+VQSFP+  AA 
Sbjct:    66 AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPL--AAA 123

Query:   136 ASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMSGRVRVLHFFTHHVNAKAGCRV 195
             +S+ + A    + F       N  R G T++IES+++M+GRVRVL  FTH + AK  CR+
Sbjct:   124 SSSQISA----AQF------QNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRI 173

Query:   196 EISVNDGSVLGFHC 209
              IS +DGS++   C
Sbjct:   174 AISSSDGSIVAVRC 187

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 29/91 (31%), Positives = 48/91 (52%)

Query:    44 KPKEPKISVTSIQLPSFSISNNTV------NFTFSQYVTIKNPNKAAFSHYDSTIQLI-Y 96
             KPK P  ++ S+ +     S N +      N T +  +++KNPN+  FS YDS+  L+ Y
Sbjct:    78 KPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFS-YDSSSALLNY 136

Query:    97 SGSQVGFMFIPAGKIAAGQTQYMAATFAVQS 127
              G  +G   +PA +IAA +T  +  T  + +
Sbjct:   137 RGQVIGEAPLPANRIAARKTVPLNITLTLMA 167

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	209
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	1e-14

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score = 69.4 bits (170), Expect = 1e-14
 Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 40/219 (18%)

Query: 1   MSKPNTNRRPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSF 60
            +     RR     R  +  C   T  L+ +   IL++ FTVF+ K+P I +  + +   
Sbjct: 25  TNHLKKTRR-----RNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKL 79

Query: 61  SISNNT-----VNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAGKIAAGQ 115
            + NNT      N T    V++KNPN A+F + ++T  + Y G+ VG    P GK  A +
Sbjct: 80  ELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARR 139

Query: 116 TQYMAATF-----AVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESR 170
           T  M  T       + S P      +S L+                        M   +R
Sbjct: 140 TMRMNVTVDIIPDKILSVPGLLTDISSGLL-----------------------NMNSYTR 176

Query: 171 MDMSGRVRVLHFFTHHVNAKAGCRVEISVNDGSVLGFHC 209
             + G+V++L     HV  K  C + +++   ++ G  C
Sbjct: 177 --IGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKC 213

Length = 219

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	209
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.18
smart00769	100	WHy Water Stress and Hypersensitive response.	98.08
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.42
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.17
COG5608	161	LEA14-like dessication related protein [Defense me	97.07
PLN03160	219	uncharacterized protein; Provisional	96.13
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	94.02
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	87.61
TIGR03602	56	streptolysinS bacteriocin protoxin, streptolysin S	85.02
PRK10893	192	lipopolysaccharide exporter periplasmic protein; P	80.86

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=9.1e-38  Score=259.97  Aligned_cols=168  Identities=27%  Similarity=0.470  Sum_probs=144.9

Q ss_pred             hhHHHHHHHHHHHHHHheeeeEEeeCCCEEEEeeEEEeeEEeeC-----CcEEEEEEEEEEEECCCCeeEEEEcc-EEEE
Q 048760           21 CIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISN-----NTVNFTFSQYVTIKNPNKAAFSHYDS-TIQL   94 (209)
Q Consensus        21 c~~~~l~llll~~~~~li~~lv~rP~~P~~~v~~~~l~~f~~~~-----~~l~~~l~~~v~v~NPN~~~~~yy~~-~~~v   94 (209)
                      |.|.+++++++++++++++|++||||+|+|+|+++++++|++++     ..+|++++++++++|||. .++||+. ++.+
T Consensus        40 ~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~~~~~v  118 (219)
T PLN03160         40 CGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFKYSNTTTTI  118 (219)
T ss_pred             HHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEEEcCeEEEE
Confidence            33333444566888899999999999999999999999999864     268888999999999999 5677775 7999


Q ss_pred             EECCceEeeEEcCCceecCCceEEEEEEEEEeeeeecccccccccccCCCCCCCCCCCCCCCCCcccCCEEEEEEEEEEE
Q 048760           95 IYSGSQVGFMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPGAGLPNNGFRVGPTMQIESRMDMS  174 (209)
Q Consensus        95 ~Y~g~~lg~~~vp~f~q~~~~~~~v~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~g~v~l~v~~~~~  174 (209)
                      +|+|+.+|++.+|+|+|++|+++.+++++.+....+.++   ..|      .+           |.++|.++|+++++++
T Consensus       119 ~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~---~~L------~~-----------D~~~G~v~l~~~~~v~  178 (219)
T PLN03160        119 YYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSV---PGL------LT-----------DISSGLLNMNSYTRIG  178 (219)
T ss_pred             EECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccc---hhH------HH-----------HhhCCeEEEEEEEEEE
Confidence            999999999999999999999999999988777655432   235      22           3568999999999999


Q ss_pred             EEEEEEEEEEeeeeEEEEeEEEEEcCCCeEeeeeC
Q 048760          175 GRVRVLHFFTHHVNAKAGCRVEISVNDGSVLGFHC  209 (209)
Q Consensus       175 ~r~~v~~~~~~~~~~~v~C~~~v~~~~~~v~~~~C  209 (209)
                      ||++++++++++++++++|++.|+.++.++++++|
T Consensus       179 gkVkv~~i~k~~v~~~v~C~v~V~~~~~~i~~~~C  213 (219)
T PLN03160        179 GKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKC  213 (219)
T ss_pred             EEEEEEEEEEEEEEEEEEeEEEEECCCCEEeccEe
Confidence            99999999999999999999999999999999999

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.18  E-value=5.8e-11  Score=86.05  Aligned_cols=96  Identities=20%  Similarity=0.296  Sum_probs=67.8

Q ss_pred             EEEEECCCCeeEEEEcc-EEEEEECCceEe-eEEcCCceecCCceEEEEEEEEEeeeeecccccccccccCCCCCCCCCC
Q 048760           74 YVTIKNPNKAAFSHYDS-TIQLIYSGSQVG-FMFIPAGKIAAGQTQYMAATFAVQSFPISTAAGASALVGAPVTPSGFPG  151 (209)
Q Consensus        74 ~v~v~NPN~~~~~yy~~-~~~v~Y~g~~lg-~~~vp~f~q~~~~~~~v~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~  151 (209)
                      +++++|||. ..++|+. ...++|+|..+| ....++|+|++++++.+.+.+..+...+..     .+      .+    
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l~~-----~l------~~----   64 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDLPR-----LL------KD----   64 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHHHH-----HH------HH----
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHHHH-----HH------Hh----
Confidence            579999999 8888876 799999999999 788999999999999999988877655422     13      11    


Q ss_pred             CCCCCCCcccCCEEEEEEEEEEEEEEEE-EEEEEeeeeEEEEe
Q 048760          152 AGLPNNGFRVGPTMQIESRMDMSGRVRV-LHFFTHHVNAKAGC  193 (209)
Q Consensus       152 ~~~~~~~~~~~g~v~l~v~~~~~~r~~v-~~~~~~~~~~~v~C  193 (209)
                             +. .+..++++..++++++++ +.+...++.+.++|
T Consensus        65 -------~~-~~~~~~~v~~~~~g~~~v~~~~~~~~~~v~~~~   99 (101)
T PF03168_consen   65 -------LL-AGRVPFDVTYRIRGTFKVLGTPIFGSVRVPVSC   99 (101)
T ss_dssp             -------HH-HTTSCEEEEEEEEEEEE-EE-TTTSCEEEEEEE
T ss_pred             -------hh-ccccceEEEEEEEEEEEEcccceeeeEEEeEEe
Confidence                   22 335557777788888985 44444445555555

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.08  E-value=4.8e-05  Score=55.61  Aligned_cols=61  Identities=18%  Similarity=0.305  Sum_probs=55.8

Q ss_pred             cEEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEEcC-CceecCCceEEEEEEEEEe
Q 048760           66 TVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIP-AGKIAAGQTQYMAATFAVQ  126 (209)
Q Consensus        66 ~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~~l~~~  126 (209)
                      .++.++.+.+.++|||....-+.+....++|+|..+|++..+ .+.+++++++.+.++++..
T Consensus        12 ~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~   73 (100)
T smart00769       12 GLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN   73 (100)
T ss_pred             ceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee
Confidence            578999999999999999888888889999999999999996 7999999999999998874

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.42  E-value=0.0042  Score=52.30  Aligned_cols=82  Identities=20%  Similarity=0.230  Sum_probs=60.6

Q ss_pred             eeCCCEEEEeeEEEeeEEeeC--CcEEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEEcCCc-eecCCceEEEE
Q 048760           44 KPKEPKISVTSIQLPSFSISN--NTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIPAG-KIAAGQTQYMA  120 (209)
Q Consensus        44 rP~~P~~~v~~~~l~~f~~~~--~~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~vp~f-~q~~~~~~~v~  120 (209)
                      -||.-.++-.++......++.  +.+..++.-.+.+.|||.....-.+.++++.|....+|.+..... ..++++.+.+.
T Consensus        97 fPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~  176 (238)
T PF07092_consen   97 FPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVN  176 (238)
T ss_pred             eCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEE
Confidence            487766666555544444443  468899999999999997766656667888999999999887754 67888887777


Q ss_pred             EEEEE
Q 048760          121 ATFAV  125 (209)
Q Consensus       121 ~~l~~  125 (209)
                      .++..
T Consensus       177 ~tV~t  181 (238)
T PF07092_consen  177 YTVKT  181 (238)
T ss_pred             EEeeE
Confidence            66554

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.17  E-value=0.0012  Score=59.04  Aligned_cols=80  Identities=23%  Similarity=0.302  Sum_probs=45.8

Q ss_pred             CCCCcceeehhHHHHHHHHHHHHHHheeeeEEeeCCCEEEEeeEEEeeEEeeCCcEEEEEEEEEEEECCCCeeEEEEccE
Q 048760           12 GSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDST   91 (209)
Q Consensus        12 ~~~~~~~~cc~~~~l~llll~~~~~li~~lv~rP~~P~~~v~~~~l~~f~~~~~~l~~~l~~~v~v~NPN~~~~~yy~~~   91 (209)
                      ++.|.+.++|++..++++|++|.++.+++..-+|   --.|+=..+++.-.  +.-..-|++.|.+.|||.....--+..
T Consensus       296 r~~~~r~~~c~~~~i~~lL~ig~~~gFv~AttKp---L~~v~v~~I~NVla--S~qELmfdl~V~A~NPn~~~V~I~d~d  370 (387)
T PF12751_consen  296 RSWFSRFASCIYLSILLLLVIGFAIGFVFATTKP---LTDVQVVSIQNVLA--SEQELMFDLTVEAFNPNWFTVTIDDMD  370 (387)
T ss_pred             ccHHhhhhHHHHHHHHHHHHHHHHHHhhhhcCcc---cccceEEEeeeeee--ccceEEEeeEEEEECCCeEEEEeccce
Confidence            5667788888887665544444333333333343   22222223333322  234578999999999998765555555


Q ss_pred             EEEEE
Q 048760           92 IQLIY   96 (209)
Q Consensus        92 ~~v~Y   96 (209)
                      +.++-
T Consensus       371 ldIFA  375 (387)
T PF12751_consen  371 LDIFA  375 (387)
T ss_pred             eeeEe
Confidence            65543

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.07  E-value=0.075  Score=41.82  Aligned_cols=81  Identities=11%  Similarity=0.117  Sum_probs=61.6

Q ss_pred             CCCEEEEeeEEEeeEEeeCCcEEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEEcC-CceecCCceEEEEEEEE
Q 048760           46 KEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIP-AGKIAAGQTQYMAATFA  124 (209)
Q Consensus        46 ~~P~~~v~~~~l~~f~~~~~~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~~l~  124 (209)
                      ++|.+.--.+..-....    ....+-.++.++|||....---+...+++-+|..+|++..- ++..++++...+++.+.
T Consensus        31 ~~p~ve~~ka~wGkvt~----s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l~  106 (161)
T COG5608          31 KKPGVESMKAKWGKVTN----SETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPLR  106 (161)
T ss_pred             CCCCceEEEEEEEEEec----cceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEEE
Confidence            46666655555544322    24678889999999998776666678888899999987764 69999999999999988


Q ss_pred             Eeeeee
Q 048760          125 VQSFPI  130 (209)
Q Consensus       125 ~~~~~~  130 (209)
                      .+...+
T Consensus       107 ~d~~~~  112 (161)
T COG5608         107 LDNSKI  112 (161)
T ss_pred             EehHHH
Confidence            776554

>PLN03160 uncharacterized protein; Provisional

Probab=96.13  E-value=0.11  Score=43.39  Aligned_cols=49  Identities=16%  Similarity=0.257  Sum_probs=32.0

Q ss_pred             CCCCCCCcceeehhHHHHHHHHHHHHHHheeeeEEeeC--CCEEEEeeEEE
Q 048760            9 RPSGSGRTNLASCIVATIFLIFVVIVILIVFFTVFKPK--EPKISVTSIQL   57 (209)
Q Consensus         9 ~~~~~~~~~~~cc~~~~l~llll~~~~~li~~lv~rP~--~P~~~v~~~~l   57 (209)
                      ++|++|++|++|++..++++++++++++++++-.=.|+  .-.++++++.+
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~   81 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLEL   81 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeee
Confidence            34455666677777777777766667777776666666  56666766665

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=94.02  E-value=0.84  Score=34.65  Aligned_cols=71  Identities=11%  Similarity=0.118  Sum_probs=42.5

Q ss_pred             hHHHHHHHHHHHHHHheeeeEE--eeCCCEEEEeeEEEeeEEeeCCcEEEEEEEEEEEECCCCeeEEEEccEEEEEECC
Q 048760           22 IVATIFLIFVVIVILIVFFTVF--KPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSG   98 (209)
Q Consensus        22 ~~~~l~llll~~~~~li~~lv~--rP~~P~~~v~~~~l~~f~~~~~~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g   98 (209)
                      +...+.++++++++.+++|.++  ++++|.+++......+-      ....+-+-++++|--.....-......+.-.|
T Consensus         6 vt~~Is~~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r~------~~gqyyVpF~V~N~gg~TAasV~V~geL~~~~   78 (122)
T TIGR02588         6 VTFGISTLILAAMFGLVAYDWLRYSNKAAVLEVAPAEVERM------QTGQYYVPFAIHNLGGTTAAAVNIRGELRQAG   78 (122)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEeehheeEE------eCCEEEEEEEEEeCCCcEEEEEEEEEEEccCC
Confidence            3444444566667766666655  66799998888766542      23456777888887755444333333333333

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=87.61  E-value=9.7  Score=28.33  Aligned_cols=30  Identities=27%  Similarity=0.473  Sum_probs=17.1

Q ss_pred             EEEEECCceEee--EEcCCceecCCceEEEEEEEE
Q 048760           92 IQLIYSGSQVGF--MFIPAGKIAAGQTQYMAATFA  124 (209)
Q Consensus        92 ~~v~Y~g~~lg~--~~vp~f~q~~~~~~~v~~~l~  124 (209)
                      -.+.|++.++|.  ..+|+   +..++..+...+.
T Consensus        68 rA~~~d~aeVGrreV~vp~---~~~~~~~~~v~v~   99 (112)
T PF14155_consen   68 RALDYDGAEVGRREVLVPP---SGERTVRVTVTVR   99 (112)
T ss_pred             EEEeCCCCEEEEEEEEECC---CCCcEEEEEEEEE
Confidence            345788889996  45555   3334444444444

>TIGR03602 streptolysinS bacteriocin protoxin, streptolysin S family

Probab=85.02  E-value=0.12  Score=32.70  Aligned_cols=14  Identities=21%  Similarity=0.408  Sum_probs=7.5

Q ss_pred             CCCCCCCcceeehhH
Q 048760            9 RPSGSGRTNLASCIV   23 (209)
Q Consensus         9 ~~~~~~~~~~~cc~~   23 (209)
                      .| ++||||++||.+
T Consensus        22 ap-ggcccccc~cc~   35 (56)
T TIGR03602        22 AP-GGCCCCCCCCCF   35 (56)
T ss_pred             cC-CCeEEEeccEEE
Confidence            45 565555555544

Members of this family are bacteriocin precursors. These small, ribosomally produced polypeptide precursors are extensively processed post-translationally. This family belongs to a class of heterocycle-containing bacteriocins, including streptolysin S from Streptococcus pyogenes, and related bacteriocins from Streptococcus iniae and Clostridium botulinum. Streptolysin S is hemolytic. Bacteriocin genes in general are small and highly diverse, with odd sequence composition, and are easily missed by many gene-finding programs.

>PRK10893 lipopolysaccharide exporter periplasmic protein; Provisional

Probab=80.86  E-value=29  Score=28.29  Aligned_cols=45  Identities=4%  Similarity=0.275  Sum_probs=28.7

Q ss_pred             HHHHHHHHheeeeEE-----------eeCCCEEEEeeEEEeeEEeeCCcEEEEEEEE
Q 048760           29 IFVVIVILIVFFTVF-----------KPKEPKISVTSIQLPSFSISNNTVNFTFSQY   74 (209)
Q Consensus        29 lll~~~~~li~~lv~-----------rP~~P~~~v~~~~l~~f~~~~~~l~~~l~~~   74 (209)
                      ++.+++++++.|...           .++.|.|.+++++...|+.+ +.+++.+...
T Consensus        11 il~~~~l~l~~W~l~~~~~~~~~~~~~~~~Pdy~~~~~~~~~yd~~-G~l~y~l~a~   66 (192)
T PRK10893         11 LLALIALVLIGWNLADKDEDTAPVVVNNNDPTYQSQHTDTVVYNPE-GALSYKLVAQ   66 (192)
T ss_pred             HHHHHHHHHHHhhccCCccccccccCCCCCCCEEEeccEEEEECCC-CCEEEEEEec
Confidence            444555566666532           46789999999999888764 3344444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	209
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.13
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.68
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.26

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.13  E-value=1.7e-05  Score=62.85  Aligned_cols=79  Identities=15%  Similarity=0.250  Sum_probs=66.8

Q ss_pred             CCCEEEEeeEEEeeEEeeCCcEEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEEcC-CceecCCceEEEEEEEE
Q 048760           46 KEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIP-AGKIAAGQTQYMAATFA  124 (209)
Q Consensus        46 ~~P~~~v~~~~l~~f~~~~~~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~~l~  124 (209)
                      ++|++++.++++..++..    ..++.+.++++|||....-+-+....+.-+|..++++..+ ++..++++++.+.+.++
T Consensus        43 ~~PeV~v~~v~~~~~~l~----~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv~  118 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD----GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVK  118 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS----SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc----eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEEE
Confidence            689999999999877653    4889999999999988666656677788899999999988 58999999999999988


Q ss_pred             Eeee
Q 048760          125 VQSF  128 (209)
Q Consensus       125 ~~~~  128 (209)
                      ....
T Consensus       119 v~~~  122 (174)
T 1yyc_A          119 VAYS  122 (174)
T ss_dssp             ESHH
T ss_pred             EEHH
Confidence            7643

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.68  E-value=2.5e-05  Score=60.50  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=63.8

Q ss_pred             CCCEEEEeeEEEeeEEeeCCcEEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEEcC-CceecCCceEEEEEEEE
Q 048760           46 KEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIP-AGKIAAGQTQYMAATFA  124 (209)
Q Consensus        46 ~~P~~~v~~~~l~~f~~~~~~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~~l~  124 (209)
                      ++|++++.++++..++.    ...++.+.++++|||....-+-+....+.-+|..++++..+ ++..++++++.+.+.++
T Consensus        20 ~~P~v~v~~v~~~~~~~----~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv~   95 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVV   95 (151)
T ss_dssp             CSCCCBCSEEEECCCTT----TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCC
T ss_pred             CCCEEEEEEeEEeccCc----ceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEEE
Confidence            67999999888876543    35789999999999987655555566677789999998887 58999999999998888


Q ss_pred             Eeee
Q 048760          125 VQSF  128 (209)
Q Consensus       125 ~~~~  128 (209)
                      ....
T Consensus        96 v~~~   99 (151)
T 1xo8_A           96 VPYS   99 (151)
T ss_dssp             EEHH
T ss_pred             EEHH
Confidence            7643

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.26  E-value=0.0017  Score=49.31  Aligned_cols=66  Identities=5%  Similarity=0.048  Sum_probs=55.2

Q ss_pred             EEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEE-cCCceecCCceEEEEEEEEEeeeeecc
Q 048760           67 VNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMF-IPAGKIAAGQTQYMAATFAVQSFPIST  132 (209)
Q Consensus        67 l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~-vp~f~q~~~~~~~v~~~l~~~~~~~~~  132 (209)
                      -.+.+.+.+.+.|||....-+-.....++..|..+|++. ...+..++.+++.+.+.+..+...+..
T Consensus        16 ~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~   82 (136)
T 3but_A           16 SQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE   82 (136)
T ss_dssp             SEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred             cEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence            367899999999999876666666788899999999977 568999999999999999988765543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	209
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.74

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.74  E-value=8.3e-06  Score=61.34  Aligned_cols=80  Identities=19%  Similarity=0.279  Sum_probs=65.1

Q ss_pred             eeCCCEEEEeeEEEeeEEeeCCcEEEEEEEEEEEECCCCeeEEEEccEEEEEECCceEeeEEcC-CceecCCceEEEEEE
Q 048760           44 KPKEPKISVTSIQLPSFSISNNTVNFTFSQYVTIKNPNKAAFSHYDSTIQLIYSGSQVGFMFIP-AGKIAAGQTQYMAAT  122 (209)
Q Consensus        44 rP~~P~~~v~~~~l~~f~~~~~~l~~~l~~~v~v~NPN~~~~~yy~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~~  122 (209)
                      +-+.|++++.++++..++.    ..+++.+.++++|||....-.-+....++.+|..++++..+ ++..++++++.+.+.
T Consensus        18 ~~~kPev~l~~v~i~~v~~----~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~vp   93 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIP   93 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTT----TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEEC
T ss_pred             CCCCCeEEEEEEEeeeccc----ceEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEEE
Confidence            4568999999998887654    36789999999999987655555566788899999998876 588999999999988


Q ss_pred             EEEee
Q 048760          123 FAVQS  127 (209)
Q Consensus       123 l~~~~  127 (209)
                      ++..-
T Consensus        94 v~v~~   98 (151)
T d1xo8a_          94 VVVPY   98 (151)
T ss_dssp             CCEEH
T ss_pred             EEEEH
Confidence            88653