Psyllid ID: psy10016


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
MVINLPSMEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKPQFDK
cEEccccccccccccEEEEEEEEEEEccccccccccEEEEEEEEEcccccccEEEEEEEEEccccccccEEEEEEEEccccccEEEEEEEEccccccccccccEEEEEEEEEEEEEcccEEEEEEEEEEcccccccccccccccccccc
cEEEccccccccEEEEEEEEEEEEEEEcccccccccEEEEEEEEcHHHHHHHcEEEEEEEcccccHHHccEHcEEEEcccccccEEEEEEccccccccccHHHEEEEEEEEEEEEEcccEEEEEEEEEccccccHHHHHcccccccccc
mvinlpsmeiipikRMAKVQLTNvtvldnsspfsqQFRFELVFECIEELKEDLEWKMIYVgsaeseeyDQVLDtiyvgpipegkhmfvfeadppdvnkipekdvLGVTVVLLTCsyrgnefvrvgffvnneyadpelkenppekpqfdk
mvinlpsmeiipiKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNeyadpelkenppekpqfdk
MVINLPSMEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKPQFDK
*******MEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEY*****************
***N***MEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENP********
MVINLPSMEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP**************
MVINLPSMEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKP****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVINLPSMEIIPIKRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKPQFDK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query149 2.2.26 [Sep-21-2011]
Q9V464218 Histone chaperone asf1 OS yes N/A 0.899 0.614 0.783 6e-60
Q9CQE6204 Histone chaperone ASF1A O yes N/A 0.899 0.656 0.686 3e-53
Q6DIP1200 Histone chaperone asf1b O yes N/A 0.899 0.67 0.679 4e-53
Q6NY34197 Histone chaperone asf1b-B yes N/A 0.899 0.680 0.671 4e-53
Q3C1E9204 Histone chaperone ASF1 OS yes N/A 0.899 0.656 0.686 1e-52
Q9Y294204 Histone chaperone ASF1A O yes N/A 0.899 0.656 0.686 1e-52
Q2KIG1204 Histone chaperone ASF1A O yes N/A 0.899 0.656 0.686 1e-52
Q69DB9201 Histone chaperone asf1a-A N/A N/A 0.899 0.666 0.686 2e-52
Q7T0M6200 Histone chaperone asf1a-B N/A N/A 0.899 0.67 0.664 3e-52
Q6NYY4197 Histone chaperone asf1b-A no N/A 0.899 0.680 0.664 6e-52
>sp|Q9V464|ASF1_DROME Histone chaperone asf1 OS=Drosophila melanogaster GN=asf1 PE=1 SV=1 Back     alignment and function desciption
 Score =  229 bits (583), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 105/134 (78%), Positives = 121/134 (90%)

Query: 16  MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTI 75
           MAKV +TNV VLDN S F   F+FEL FECIEELKEDLEWKMIYVGSAESEE+DQVLDTI
Sbjct: 1   MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTI 60

Query: 76  YVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP 135
           YVGP+PEG+H+FVF+ADPPDV+KIPE D +GVT+VLLTCSYRG EFVRVG++VNN+YADP
Sbjct: 61  YVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADP 120

Query: 136 ELKENPPEKPQFDK 149
           E++ENPP KP F+K
Sbjct: 121 EMRENPPTKPLFEK 134




Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. Cooperates with chromatin assembly factor 1 (CAF-1) to promote replication-dependent chromatin assembly. Plays a role in the formation of silent heterochromatin.
Drosophila melanogaster (taxid: 7227)
>sp|Q9CQE6|ASF1A_MOUSE Histone chaperone ASF1A OS=Mus musculus GN=Asf1a PE=2 SV=1 Back     alignment and function description
>sp|Q6DIP1|ASF1B_XENTR Histone chaperone asf1b OS=Xenopus tropicalis GN=asf1b PE=2 SV=1 Back     alignment and function description
>sp|Q6NY34|AS1BB_DANRE Histone chaperone asf1b-B OS=Danio rerio GN=asf1bb PE=2 SV=1 Back     alignment and function description
>sp|Q3C1E9|ASF1_CHICK Histone chaperone ASF1 OS=Gallus gallus GN=ASF1 PE=1 SV=1 Back     alignment and function description
>sp|Q9Y294|ASF1A_HUMAN Histone chaperone ASF1A OS=Homo sapiens GN=ASF1A PE=1 SV=1 Back     alignment and function description
>sp|Q2KIG1|ASF1A_BOVIN Histone chaperone ASF1A OS=Bos taurus GN=ASF1A PE=2 SV=1 Back     alignment and function description
>sp|Q69DB9|AS1AA_XENLA Histone chaperone asf1a-A OS=Xenopus laevis GN=asf1aa PE=1 SV=1 Back     alignment and function description
>sp|Q7T0M6|AS1AB_XENLA Histone chaperone asf1a-B OS=Xenopus laevis GN=asf1ab PE=2 SV=1 Back     alignment and function description
>sp|Q6NYY4|AS1BA_DANRE Histone chaperone asf1b-A OS=Danio rerio GN=asf1ba PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query149
332374970201 unknown [Dendroctonus ponderosae] 0.899 0.666 0.805 1e-60
322789808199 hypothetical protein SINV_03862 [Solenop 0.899 0.673 0.820 3e-60
307176639198 Histone chaperone asf1 [Camponotus flori 0.899 0.676 0.820 3e-60
332030744199 Histone chaperone asf1 [Acromyrmex echin 0.899 0.673 0.820 4e-60
357622911214 histone chaperone asf1 [Danaus plexippus 0.899 0.626 0.816 9e-60
307197464198 Histone chaperone asf1 [Harpegnathos sal 0.899 0.676 0.813 9e-60
340715785198 PREDICTED: histone chaperone asf1-like [ 0.899 0.676 0.805 1e-59
66554865198 PREDICTED: histone chaperone asf1 [Apis 0.899 0.676 0.805 1e-59
289742289242 histone chaperone [Glossina morsitans mo 0.899 0.553 0.798 2e-59
383862263198 PREDICTED: histone chaperone asf1-like [ 0.899 0.676 0.798 3e-59
>gi|332374970|gb|AEE62626.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/134 (80%), Positives = 122/134 (91%)

Query: 16  MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTI 75
           MAKVQL N+TV+DN SPF   F+FE+ FECIEELKEDLEWKMIYVGSAESEEYDQVLD++
Sbjct: 1   MAKVQLCNITVMDNPSPFLNPFQFEITFECIEELKEDLEWKMIYVGSAESEEYDQVLDSV 60

Query: 76  YVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP 135
           YVGPIPEGKHMFVF+ADPP+V++IPE D LGVTVVLLTCSYR  EF+RVG+F+NNEY+DP
Sbjct: 61  YVGPIPEGKHMFVFQADPPNVSRIPENDALGVTVVLLTCSYRAQEFIRVGYFINNEYSDP 120

Query: 136 ELKENPPEKPQFDK 149
           ELKENPP  PQFDK
Sbjct: 121 ELKENPPSPPQFDK 134




Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322789808|gb|EFZ14965.1| hypothetical protein SINV_03862 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307176639|gb|EFN66107.1| Histone chaperone asf1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332030744|gb|EGI70420.1| Histone chaperone asf1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|357622911|gb|EHJ74269.1| histone chaperone asf1 [Danaus plexippus] Back     alignment and taxonomy information
>gi|307197464|gb|EFN78698.1| Histone chaperone asf1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340715785|ref|XP_003396389.1| PREDICTED: histone chaperone asf1-like [Bombus terrestris] gi|350418085|ref|XP_003491727.1| PREDICTED: histone chaperone asf1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|66554865|ref|XP_624816.1| PREDICTED: histone chaperone asf1 [Apis mellifera] gi|380019385|ref|XP_003693589.1| PREDICTED: histone chaperone asf1-like [Apis florea] Back     alignment and taxonomy information
>gi|289742289|gb|ADD19892.1| histone chaperone [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|383862263|ref|XP_003706603.1| PREDICTED: histone chaperone asf1-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query149
FB|FBgn0029094218 asf1 "anti-silencing factor 1" 0.899 0.614 0.783 5.9e-57
ZFIN|ZDB-GENE-040426-2594197 asf1bb "ASF1 anti-silencing fu 0.885 0.670 0.681 1.1e-50
MGI|MGI:1913653204 Asf1a "ASF1 anti-silencing fun 0.899 0.656 0.686 2.2e-50
RGD|1311941204 Asf1a "ASF1 anti-silencing fun 0.899 0.656 0.686 2.2e-50
UNIPROTKB|Q3C1E9204 ASF1 "Histone chaperone ASF1" 0.899 0.656 0.686 3.6e-50
UNIPROTKB|Q2KIG1204 ASF1A "Histone chaperone ASF1A 0.899 0.656 0.686 3.6e-50
UNIPROTKB|E2RT84204 ASF1A "Uncharacterized protein 0.899 0.656 0.686 3.6e-50
UNIPROTKB|Q9Y294204 ASF1A "Histone chaperone ASF1A 0.899 0.656 0.686 3.6e-50
UNIPROTKB|F1SF37204 ASF1A "Uncharacterized protein 0.899 0.656 0.686 3.6e-50
ZFIN|ZDB-GENE-031118-197197 asf1ba "ASF1 anti-silencing fu 0.885 0.670 0.674 2.5e-49
FB|FBgn0029094 asf1 "anti-silencing factor 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 105/134 (78%), Positives = 121/134 (90%)

Query:    16 MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTI 75
             MAKV +TNV VLDN S F   F+FEL FECIEELKEDLEWKMIYVGSAESEE+DQVLDTI
Sbjct:     1 MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTI 60

Query:    76 YVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP 135
             YVGP+PEG+H+FVF+ADPPDV+KIPE D +GVT+VLLTCSYRG EFVRVG++VNN+YADP
Sbjct:    61 YVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADP 120

Query:   136 ELKENPPEKPQFDK 149
             E++ENPP KP F+K
Sbjct:   121 EMRENPPTKPLFEK 134




GO:0006334 "nucleosome assembly" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0006325 "chromatin organization" evidence=IGI;IDA
GO:0035059 "RCAF complex" evidence=IDA
GO:0048024 "regulation of mRNA splicing, via spliceosome" evidence=IMP
GO:0007517 "muscle organ development" evidence=IMP
GO:0048813 "dendrite morphogenesis" evidence=IMP
ZFIN|ZDB-GENE-040426-2594 asf1bb "ASF1 anti-silencing function 1 homolog Bb" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1913653 Asf1a "ASF1 anti-silencing function 1 homolog A (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311941 Asf1a "ASF1 anti-silencing function 1 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3C1E9 ASF1 "Histone chaperone ASF1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KIG1 ASF1A "Histone chaperone ASF1A" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RT84 ASF1A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y294 ASF1A "Histone chaperone ASF1A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SF37 ASF1A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031118-197 asf1ba "ASF1 anti-silencing function 1 homolog Ba (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6NY34AS1BB_DANRENo assigned EC number0.67160.89930.6802yesN/A
P0CM26ASF1_CRYNJNo assigned EC number0.50.87910.6359yesN/A
Q6BYE5ASF1_DEBHANo assigned EC number0.53380.89260.5037yesN/A
O74515ASF1_SCHPONo assigned EC number0.5760.83220.4732yesN/A
Q9Y294ASF1A_HUMANNo assigned EC number0.68650.89930.6568yesN/A
Q759F6ASF1_ASHGONo assigned EC number0.54130.89260.4818yesN/A
Q6CN69ASF1_KLULANo assigned EC number0.53380.89260.4801yesN/A
Q54N45ASF1_DICDINo assigned EC number0.55970.89930.8701yesN/A
Q6CI62ASF1_YARLINo assigned EC number0.53730.89930.5056yesN/A
Q4WXX5ASF1_ASPFUNo assigned EC number0.57690.87240.4609yesN/A
P32447ASF1_YEASTNo assigned EC number0.54880.89260.4767yesN/A
Q6FL84ASF1_CANGANo assigned EC number0.55630.89260.4360yesN/A
Q6DIP1ASF1B_XENTRNo assigned EC number0.67910.89930.67yesN/A
Q3C1E9ASF1_CHICKNo assigned EC number0.68650.89930.6568yesN/A
Q2UKV7ASF1_ASPORNo assigned EC number0.56150.87240.4561yesN/A
Q4IR08ASF1_GIBZENo assigned EC number0.53730.89930.4802yesN/A
Q9V464ASF1_DROMENo assigned EC number0.78350.89930.6146yesN/A
Q9C9M6ASF1A_ARATHNo assigned EC number0.58200.89930.6836yesN/A
Q17603ASF1L_CAEELNo assigned EC number0.52630.89260.5428yesN/A
Q2KIG1ASF1A_BOVINNo assigned EC number0.68650.89930.6568yesN/A
Q9CQE6ASF1A_MOUSENo assigned EC number0.68650.89930.6568yesN/A
Q5B3I9ASF1_EMENINo assigned EC number0.60.87240.4659yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query149
pfam04729154 pfam04729, ASF1_hist_chap, ASF1 like histone chape 6e-78
COG5137 279 COG5137, COG5137, Histone chaperone involved in ge 5e-45
>gnl|CDD|147073 pfam04729, ASF1_hist_chap, ASF1 like histone chaperone Back     alignment and domain information
 Score =  227 bits (581), Expect = 6e-78
 Identities = 92/134 (68%), Positives = 112/134 (83%)

Query: 16  MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTI 75
           M+ V LTNV VL+N + F+  F+FE+ FEC+E LK+DLEWK+IYVGSAESE+YDQVLD++
Sbjct: 1   MSLVNLTNVEVLNNPASFTDPFQFEITFECLEPLKDDLEWKLIYVGSAESEKYDQVLDSV 60

Query: 76  YVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP 135
            VGPIP G+H F FEADPPD  KIP +D+LGVTV+LLTCSYRG EF+RVG++VNNEY D 
Sbjct: 61  LVGPIPVGRHEFTFEADPPDPEKIPPEDILGVTVLLLTCSYRGQEFIRVGYYVNNEYTDE 120

Query: 136 ELKENPPEKPQFDK 149
           EL+ENPP KP  DK
Sbjct: 121 ELRENPPAKPIIDK 134


This family includes the yeast and human ASF1 protein. These proteins have histone chaperone activity. ASF1 participates in both the replication-dependent and replication-independent pathways. The structure three-dimensional has been determined as a a compact immunoglobulin-like beta sandwich fold topped by three helical linkers. Length = 154

>gnl|CDD|227466 COG5137, COG5137, Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 149
KOG3265|consensus 250 100.0
PF04729154 ASF1_hist_chap: ASF1 like histone chaperone; Inter 100.0
COG5137 279 Histone chaperone involved in gene silencing [Tran 100.0
PF14524142 Wzt_C: Wzt C-terminal domain; PDB: 2R5O_B. 86.37
PF02221134 E1_DerP2_DerF2: ML domain; InterPro: IPR003172 The 81.43
>KOG3265|consensus Back     alignment and domain information
Probab=100.00  E-value=1.5e-71  Score=462.48  Aligned_cols=134  Identities=69%  Similarity=1.235  Sum_probs=133.1

Q ss_pred             eeeeEEeeEEEccCCCcCCCceeEEEEEEEcccccCCeEEEEEEEecCCCCCCCeeeeeEEecccccceEEEEEEeCCCC
Q psy10016         16 MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPD   95 (149)
Q Consensus        16 Ms~V~v~~V~v~~np~~f~~p~~FeI~FEcl~~L~~dlewKiiYVgSa~s~~~DQ~Lds~~VGPi~~G~~kF~~ea~pPd   95 (149)
                      ||+|||+||+||+|||+|.+||+|+|||||++.|++|||||+||||||+|++|||+|||++|||||+|+|||+|+|||||
T Consensus         1 Ms~v~i~~V~Vl~Npa~F~dPfkFEItFEC~E~Lk~DLEWkliYVGSa~See~DQvLdsilVGPVP~G~~~FVf~AD~Pd   80 (250)
T KOG3265|consen    1 MSKVNILNVEVLDNPAKFVDPFKFEITFECLEELKHDLEWKLIYVGSAESEEYDQVLDSILVGPVPVGRHKFVFQADAPD   80 (250)
T ss_pred             CceeeeeeEEEccCccccCCceeEEEEEEEhhhcCCCceEEEEEeeccccchhhhhhhheeeccccccceEEEEecCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceeeEEEEEEEEeCCceeeEEEeeeecccCCcccccCCCCCCCCCC
Q psy10016         96 VNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKPQFDK  149 (149)
Q Consensus        96 ~~kIp~~dilGvTviLlt~sY~~qEFiRIGYYVnneY~d~eL~enpP~~p~~dk  149 (149)
                      ++|||.+|++|||+|||||||++||||||||||||+|++++||||||++|++||
T Consensus        81 ~~kIP~~d~vGVTviLltC~Y~gQEFIRvGYyVnNeY~~~elrEnpP~k~~idK  134 (250)
T KOG3265|consen   81 PSKIPEDDIVGVTVILLTCSYRGQEFIRVGYYVNNEYTEEELRENPPSKPLIDK  134 (250)
T ss_pred             cccCcccceeeeEEEEEEEEEcCceeEEEEEEecCCCCchhhccCCCCchhHHH
Confidence            999999999999999999999999999999999999999999999999999986



>PF04729 ASF1_hist_chap: ASF1 like histone chaperone; InterPro: IPR006818 This family includes the yeast and human ASF1 protein Back     alignment and domain information
>COG5137 Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics] Back     alignment and domain information
>PF14524 Wzt_C: Wzt C-terminal domain; PDB: 2R5O_B Back     alignment and domain information
>PF02221 E1_DerP2_DerF2: ML domain; InterPro: IPR003172 The MD-2-related lipid-recognition (ML) domain is implicated in lipid recognition, particularly in the recognition of pathogen related products Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query149
2io5_A175 Crystal Structure Of The Cia- Histone H3-H4 Complex 2e-53
3aad_B158 Structure Of The Histone Chaperone Cia/asf1-double 2e-53
2i32_A182 Structure Of A Human Asf1a-Hira Complex And Insight 3e-53
1tey_A158 Nmr Structure Of Human Histone Chaperone, Asf1a Len 3e-53
2ygv_A158 Conserved N-Terminal Domain Of The Yeast Histone Ch 4e-40
1wg3_A175 Structural Analysis Of Yeast Nucleosome-Assembly Fa 7e-40
2idc_A179 Structure Of The Histone H3-Asf1 Chaperone Interact 1e-39
1roc_A155 Crystal Structure Of The Histone Deposition Protein 2e-39
4eo5_A169 Yeast Asf1 Bound To H3H4G94P MUTANT Length = 169 3e-39
2hue_A175 Structure Of The H3-h4 Chaperone Asf1 Bound To Hist 3e-39
2cu9_A161 Crystal Structure Of Histone Chaperone Cia1 Length 1e-38
>pdb|2IO5|A Chain A, Crystal Structure Of The Cia- Histone H3-H4 Complex Length = 175 Back     alignment and structure

Iteration: 1

Score = 204 bits (518), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 92/136 (67%), Positives = 112/136 (82%) Query: 14 KRMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLD 73 MAKVQ+ NV VLDN SPF F+FE+ FECIE+L EDLEWK+IYVGSAESEEYDQVLD Sbjct: 2 SHMAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLD 61 Query: 74 TIYVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYA 133 ++ VGP+P G+HMFVF+AD P+ IP+ D +GVTVVL+TC+YRG EF+RVG++VNNEY Sbjct: 62 SVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYT 121 Query: 134 DPELKENPPEKPQFDK 149 + EL+ENPP KP F K Sbjct: 122 ETELRENPPVKPDFSK 137
>pdb|3AAD|B Chain B, Structure Of The Histone Chaperone Cia/asf1-double Bromodomain Complex Linking Histone Modifications And Site-specific Histone Eviction Length = 158 Back     alignment and structure
>pdb|2I32|A Chain A, Structure Of A Human Asf1a-Hira Complex And Insights Into Specificity Of Histone Chaperone Complex Assembly Length = 182 Back     alignment and structure
>pdb|1TEY|A Chain A, Nmr Structure Of Human Histone Chaperone, Asf1a Length = 158 Back     alignment and structure
>pdb|2YGV|A Chain A, Conserved N-Terminal Domain Of The Yeast Histone Chaperone Asf1 In Complex With The C-Terminal Fragment Of Rad53 Length = 158 Back     alignment and structure
>pdb|1WG3|A Chain A, Structural Analysis Of Yeast Nucleosome-Assembly Factor Cia1p Length = 175 Back     alignment and structure
>pdb|2IDC|A Chain A, Structure Of The Histone H3-Asf1 Chaperone Interaction Length = 179 Back     alignment and structure
>pdb|1ROC|A Chain A, Crystal Structure Of The Histone Deposition Protein Asf1 Length = 155 Back     alignment and structure
>pdb|4EO5|A Chain A, Yeast Asf1 Bound To H3H4G94P MUTANT Length = 169 Back     alignment and structure
>pdb|2HUE|A Chain A, Structure Of The H3-h4 Chaperone Asf1 Bound To Histones H3 And H4 Length = 175 Back     alignment and structure
>pdb|2CU9|A Chain A, Crystal Structure Of Histone Chaperone Cia1 Length = 161 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query149
2i32_A182 Anti-silencing factor 1 paralog A; histone deposit 4e-67
2io5_A175 ASF1A protein; chaperone, chaperone-structural pro 6e-65
1roc_A155 Anti-silencing protein 1; beta-sandwich, replicati 2e-64
2hue_A175 Anti-silencing protein 1; mini beta sheet, elongat 4e-63
2idc_A179 Anti-silencing protein 1 and histone H3 chimera; I 4e-62
2cu9_A161 Spcia1, histone chaperone CIA1; immunoglobulin fol 4e-60
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B Length = 182 Back     alignment and structure
 Score =  200 bits (510), Expect = 4e-67
 Identities = 92/134 (68%), Positives = 112/134 (83%)

Query: 16  MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTI 75
           MAKVQ+ NV VLDN SPF   F+FE+ FECIE+L EDLEWK+IYVGSAESEEYDQVLD++
Sbjct: 26  MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 85

Query: 76  YVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP 135
            VGP+P G+HMFVF+AD P+   IP+ D +GVTVVL+TC+YRG EF+RVG++VNNEY + 
Sbjct: 86  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 145

Query: 136 ELKENPPEKPQFDK 149
           EL+ENPP KP F K
Sbjct: 146 ELRENPPVKPDFSK 159


>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1 Length = 175 Back     alignment and structure
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A Length = 155 Back     alignment and structure
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A Length = 175 Back     alignment and structure
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae} Length = 179 Back     alignment and structure
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A Length = 161 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query149
1roc_A155 Anti-silencing protein 1; beta-sandwich, replicati 100.0
2i32_A182 Anti-silencing factor 1 paralog A; histone deposit 100.0
2idc_A179 Anti-silencing protein 1 and histone H3 chimera; I 100.0
2io5_A175 ASF1A protein; chaperone, chaperone-structural pro 100.0
2cu9_A161 Spcia1, histone chaperone CIA1; immunoglobulin fol 100.0
2hue_A175 Anti-silencing protein 1; mini beta sheet, elongat 100.0
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A Back     alignment and structure
Probab=100.00  E-value=1.3e-73  Score=449.53  Aligned_cols=135  Identities=53%  Similarity=0.995  Sum_probs=133.8

Q ss_pred             ceeeeEEeeEEEccCCCcCCCceeEEEEEEEcccccCCeEEEEEEEecCCCCCCCeeeeeEEecccccceEEEEEEeCCC
Q psy10016         15 RMAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPP   94 (149)
Q Consensus        15 ~Ms~V~v~~V~v~~np~~f~~p~~FeI~FEcl~~L~~dlewKiiYVgSa~s~~~DQ~Lds~~VGPi~~G~~kF~~ea~pP   94 (149)
                      +||+|||+||+|+||||+|++||+|||+|||+++|++|||||++|||||+|++|||+||+++|||+++|+|||+|+|+||
T Consensus         1 ~ms~V~i~~V~vl~np~~f~~p~~feI~fEc~e~L~~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpP   80 (155)
T 1roc_A            1 GASIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPP   80 (155)
T ss_dssp             CCCSEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCC
T ss_pred             CCcEEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCceeeEEEEEEEEeCCceeeEEEeeeecccCCcccccCCCCCCCCCC
Q psy10016         95 DVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKPQFDK  149 (149)
Q Consensus        95 d~~kIp~~dilGvTviLlt~sY~~qEFiRIGYYVnneY~d~eL~enpP~~p~~dk  149 (149)
                      |+++||.+|++||||+|||||||+|||+||||||||+|+|+||+||||++|++||
T Consensus        81 d~~~Ip~~dilGvTvillt~sY~~qEFiRVGYYVnn~Y~d~el~enpP~~~~~d~  135 (155)
T 1roc_A           81 SAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKVQVDH  135 (155)
T ss_dssp             CGGGCCTHHHHSCEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGG
T ss_pred             CcccCChhhcceeEEEEEEEEECCcEEEEEEEEEeeeeCChHHccCCCCCcchHH
Confidence            9999999999999999999999999999999999999999999999999999986



>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B Back     alignment and structure
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1 Back     alignment and structure
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A Back     alignment and structure
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 149
d2i32a1154 b.1.22.1 (A:1-154) Anti-silencing protein 1, ASF1 4e-74
d1roca_155 b.1.22.1 (A:) Anti-silencing protein 1, ASF1 {Bake 2e-71
d2cu9a1161 b.1.22.1 (A:1-161) Anti-silencing protein 1, ASF1 4e-69
>d2i32a1 b.1.22.1 (A:1-154) Anti-silencing protein 1, ASF1 {Human (Homo sapiens) [TaxId: 9606]} Length = 154 Back     information, alignment and structure

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: ASF1-like
family: ASF1-like
domain: Anti-silencing protein 1, ASF1
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  216 bits (551), Expect = 4e-74
 Identities = 92/134 (68%), Positives = 112/134 (83%)

Query: 16  MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTI 75
           MAKVQ+ NV VLDN SPF   F+FE+ FECIE+L EDLEWK+IYVGSAESEEYDQVLD++
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60

Query: 76  YVGPIPEGKHMFVFEADPPDVNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADP 135
            VGP+P G+HMFVF+AD P+   IP+ D +GVTVVL+TC+YRG EF+RVG++VNNEY + 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120

Query: 136 ELKENPPEKPQFDK 149
           EL+ENPP KP F K
Sbjct: 121 ELRENPPVKPDFSK 134


>d1roca_ b.1.22.1 (A:) Anti-silencing protein 1, ASF1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 155 Back     information, alignment and structure
>d2cu9a1 b.1.22.1 (A:1-161) Anti-silencing protein 1, ASF1 {Schizosaccharomyces pombe [TaxId: 4896]} Length = 161 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query149
d2i32a1154 Anti-silencing protein 1, ASF1 {Human (Homo sapien 100.0
d2cu9a1161 Anti-silencing protein 1, ASF1 {Schizosaccharomyce 100.0
d1roca_155 Anti-silencing protein 1, ASF1 {Baker's yeast (Sac 100.0
>d2i32a1 b.1.22.1 (A:1-154) Anti-silencing protein 1, ASF1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: ASF1-like
family: ASF1-like
domain: Anti-silencing protein 1, ASF1
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=2.1e-73  Score=446.01  Aligned_cols=134  Identities=69%  Similarity=1.250  Sum_probs=133.1

Q ss_pred             eeeeEEeeEEEccCCCcCCCceeEEEEEEEcccccCCeEEEEEEEecCCCCCCCeeeeeEEecccccceEEEEEEeCCCC
Q psy10016         16 MAKVQLTNVTVLDNSSPFSQQFRFELVFECIEELKEDLEWKMIYVGSAESEEYDQVLDTIYVGPIPEGKHMFVFEADPPD   95 (149)
Q Consensus        16 Ms~V~v~~V~v~~np~~f~~p~~FeI~FEcl~~L~~dlewKiiYVgSa~s~~~DQ~Lds~~VGPi~~G~~kF~~ea~pPd   95 (149)
                      ||+|||+||+|+||||+|++||+|||+|||+++|++|||||+||||||+|++|||+||+++|||+++|+|||+|+|+|||
T Consensus         1 Ms~V~i~~V~vl~np~~f~~p~~feI~fEcle~L~~dleWkliYVgSa~~~~~DQ~LD~~~VGPi~~G~~~F~~~adpPd   80 (154)
T d2i32a1           1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPN   80 (154)
T ss_dssp             CCSEEEEEEEECSCSEETTSCEEEEEEEEESSCCSSCEEEEEEEESCSSCGGGEEEEEEEEECCCCSEEEEEEEEECCCC
T ss_pred             CCeEEEEEEEEcCCCcccCCCEEEEEEEEEcccCCCCcEEEEEEEecCCCccCCeEEEEEEeCCcccceEEEEEEcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceeeEEEEEEEEeCCceeeEEEeeeecccCCcccccCCCCCCCCCC
Q psy10016         96 VNKIPEKDVLGVTVVLLTCSYRGNEFVRVGFFVNNEYADPELKENPPEKPQFDK  149 (149)
Q Consensus        96 ~~kIp~~dilGvTviLlt~sY~~qEFiRIGYYVnneY~d~eL~enpP~~p~~dk  149 (149)
                      +++||.+|++||||+|||||||+|||+||||||||+|+|+||+||||++|++||
T Consensus        81 ~~~Ip~~dilGvTvillt~~Y~~qEFiRVGYYVnn~Y~d~el~e~pP~~~~~dk  134 (154)
T d2i32a1          81 PGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSK  134 (154)
T ss_dssp             GGGSCHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGG
T ss_pred             hhHCCchhcccceEEEEEEEECCeEEEEEEEEEccccCChHhccCCCCcccHHH
Confidence            999999999999999999999999999999999999999999999999999986



>d2cu9a1 b.1.22.1 (A:1-161) Anti-silencing protein 1, ASF1 {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1roca_ b.1.22.1 (A:) Anti-silencing protein 1, ASF1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure