Psyllid ID: psy10073

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MEHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD
Secondary Structure (PSIPRED)
ccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHcccccccccccccccccccccccccccccccHHHHHHHcccccccccccccHHHHcccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccccccccHHHcccccccccccEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccEccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mehweqcllvplstkktclycnkyvpsdiDVFIghcqtcpnmsflnsvipqsckhcknftsSDVNLLMEhsencpcmvrpdpvkyKFICVACDYFTIISQNMRNhtlihlgdkqfkcclcsygayqkEKLQFHVKnkhstkvkd
Flexible Loop (DISEMBL)
mehweqclLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKeklqfhvknkhstkvkd
Low Complexity Region (SEG)
MEHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD
Disordered region (IsUnstruct)
***WEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH***********
Disordered Region (DISOPRED)
*EHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH***********
Disordered Region (DISEMBL)
MEHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV**********
Disordered Region (DISPRO)
*EHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEHWEQCLLVPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
O54963	1069	RE1-silencing transcripti	yes	N/A	0.902	0.121	0.273	1e-08
Q8VIG1	1082	RE1-silencing transcripti	yes	N/A	0.902	0.120	0.273	4e-08
Q13127	1097	RE1-silencing transcripti	yes	N/A	0.361	0.047	0.423	9e-06
Q2EI21	1501	RE1-silencing transcripti	N/A	N/A	0.368	0.035	0.396	1e-05
Q9PVG3	529	RE1-silencing transcripti	N/A	N/A	0.576	0.156	0.3	1e-05
G3V893	1336	Zinc finger protein 335 O	no	N/A	0.263	0.028	0.351	0.0002
Q9H4Z2	1342	Zinc finger protein 335 O	no	N/A	0.263	0.028	0.351	0.0002
A2A5K6	1337	Zinc finger protein 335 O	no	N/A	0.263	0.028	0.351	0.0002
Q2EI20	855	RE1-silencing transcripti	yes	N/A	0.361	0.060	0.365	0.0003
Q08705	728	Transcriptional repressor	no	N/A	0.326	0.064	0.327	0.0004

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y  ++ + ++ H           C+ CP          
Sbjct: 261 HWRKHLRNHFPRKVYTCSKCN-YFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 319

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 320 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 372

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 373 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.
Rattus norvegicus (taxid: 10116)

>sp|Q8VIG1|REST_MOUSE RE1-silencing transcription factor OS=Mus musculus GN=Rest PE=2 SV=2

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Mus musculus (taxid: 10090)

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 89  CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
           C  CDY T    N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 363 CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 414

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Homo sapiens (taxid: 9606)

>sp|Q2EI21|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis GN=rest-a PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 87  FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
             C  CDY T    N + H  +H+  +QF C +C Y A +K  LQ+H+K++HS
Sbjct: 359 LTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRHS 411

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells (By similarity). Plays a role in the early development of the nervous system and is required for proper patterning of the neuroectoderm during gastrulation. This involves the correct speciation of the neuroepithelial domain and adequate development of the non-neural ectoderm.

Xenopus laevis (taxid: 8355)

>sp|Q9PVG3|RESTB_XENLA RE1-silencing transcription factor B (Fragment) OS=Xenopus laevis GN=rest-b PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 50  PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
           P  C+ C ++ +S+ + +  H+       +P        C  CDY T    N + H  +H
Sbjct: 327 PFKCEQC-SYVASNQHEVTRHARQVHNGPKP------LTCPHCDYKTADRSNFKKHVELH 379

Query: 110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
           +  +QF C +C Y A +K  LQ+H+K++HS
Sbjct: 380 VNPRQFLCPVCDYAASKKCNLQYHIKSRHS 409

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells (By similarity). Plays a role in the early development of the nervous system and is required for proper patterning of the neuroectoderm during gastrulation. This involves the correct speciation of the neuroepithelial domain and adequate development of the non-neural ectoderm.

Xenopus laevis (taxid: 8355)

>sp|G3V893|ZN335_RAT Zinc finger protein 335 OS=Rattus norvegicus GN=Znf335 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 86  KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
           +F C  C++     + + NH L H+ DK FKC  C Y  ++++ L  HV  KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673

Enhances ligand-dependent transcriptional activation by nuclear hormone receptors. This effect may be mediated by NCOA6.

Rattus norvegicus (taxid: 10116)

>sp|Q9H4Z2|ZN335_HUMAN Zinc finger protein 335 OS=Homo sapiens GN=ZNF335 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 86  KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
           +F C  C++     + + NH L H+ DK FKC  C Y  ++++ L  HV  KH+
Sbjct: 620 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 673

May regulate transcriptional activation through NCOA6.

Homo sapiens (taxid: 9606)

>sp|A2A5K6|ZN335_MOUSE Zinc finger protein 335 OS=Mus musculus GN=Znf335 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 86  KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS 139
           +F C  C++     + + NH L H+ DK FKC  C Y  ++++ L  HV  KH+
Sbjct: 621 RFKCEFCEFVCEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHT 674

Enhances ligand-dependent transcriptional activation by nuclear hormone receptors. This effect may be mediated by NCOA6.

Mus musculus (taxid: 10090)

>sp|Q2EI20|REST_DANRE RE1-silencing transcription factor OS=Danio rerio GN=rest PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 87  FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
             C  C Y T    N + H  +H+  +QF C +C Y A +K  LQ+H+K++H
Sbjct: 349 LSCPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKSRH 400

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells.

Danio rerio (taxid: 7955)

>sp|Q08705|CTCF_CHICK Transcriptional repressor CTCF OS=Gallus gallus GN=CTCF PE=1 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 87  FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
           F C  CDY ++    ++ H   H G++ F+C LCSY +    KL+ H++     K
Sbjct: 351 FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEK 405

Acts as both a transcriptional activator and repressor of the MYC gene.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
13929116	1069	RE1-silencing transcription factor [Ratt	0.902	0.121	0.273	9e-07
254675343	1082	RE1-silencing transcription factor [Mus	0.902	0.120	0.273	3e-06
18146803	1082	neural-restrictive silencer factor nrsf/	0.902	0.120	0.273	3e-06
148705985	1082	RE1-silencing transcription factor [Mus	0.902	0.120	0.273	3e-06
149035172	1048	RE1-silencing transcription factor [Ratt	0.902	0.124	0.273	3e-06
311262204	1037	PREDICTED: RE1-silencing transcription f	0.902	0.125	0.260	5e-06
74186662	853	unnamed protein product [Mus musculus]	0.902	0.152	0.273	8e-06
390460850	1244	PREDICTED: LOW QUALITY PROTEIN: RE1-sile	0.902	0.104	0.267	9e-06
260803229	284	hypothetical protein BRAFLDRAFT_211690 [	0.645	0.327	0.316	9e-06
444516263	979	RE1-silencing transcription factor [Tupa	0.861	0.126	0.287	9e-06

>gi|13929116|ref|NP_113976.1| RE1-silencing transcription factor [Rattus norvegicus] gi|81908377|sp|O54963.1|REST_RAT RecName: Full=RE1-silencing transcription factor; AltName: Full=Neural-restrictive silencer factor gi|2746326|gb|AAB94893.1| zinc finger transcription factor REST protein [Rattus norvegicus]

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y  ++ + ++ H           C+ CP          
Sbjct: 261 HWRKHLRNHFPRKVYTCSKCN-YFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 319

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 320 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 372

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 373 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|254675343|ref|NP_035393.2| RE1-silencing transcription factor [Mus musculus] gi|341941963|sp|Q8VIG1.2|REST_MOUSE RecName: Full=RE1-silencing transcription factor; AltName: Full=Neural-restrictive silencer factor gi|117558671|gb|AAI27066.1| RE1-silencing transcription factor [Mus musculus]

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|18146803|dbj|BAB82460.1| neural-restrictive silencer factor nrsf/rest [Mus musculus]

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148705985|gb|EDL37932.1| RE1-silencing transcription factor [Mus musculus]

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|149035172|gb|EDL89876.1| RE1-silencing transcription factor [Rattus norvegicus]

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 240 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 298

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 299 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 351

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 352 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 392

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|311262204|ref|XP_003129069.1| PREDICTED: RE1-silencing transcription factor [Sus scrofa] gi|335293561|ref|XP_003356995.1| PREDICTED: RE1-silencing transcription factor-like [Sus scrofa] gi|456753171|gb|JAA74113.1| RE1-silencing transcription factor [Sus scrofa]

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 261 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 319

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C ++ +S+ + +  H+       +P        C  CDY T   
Sbjct: 320 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQVHNGPKP------LSCPHCDYKTADR 372

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 373 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|74186662|dbj|BAB23689.3| unnamed protein product [Mus musculus]

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 257 HWRKHLRNHFPRKVYTCSKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 315

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 316 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 368

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 369 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390460850|ref|XP_002745853.2| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor [Callithrix jacchus]

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGH-----------CQTCP---------- 40
           HW + L      K  TC  CN Y     + ++ H           C+ CP          
Sbjct: 429 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 487

Query: 41  -NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
            +M   +   P  C  C ++ +S+ + +  H+        P P+     C  CDY T   
Sbjct: 488 RHMRTHSGEKPFKCDQC-SYVASNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADR 540

Query: 100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
            N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct: 541 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 581

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260803229|ref|XP_002596493.1| hypothetical protein BRAFLDRAFT_211690 [Branchiostoma floridae] gi|229281750|gb|EEN52505.1| hypothetical protein BRAFLDRAFT_211690 [Branchiostoma floridae]

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 41  NMSFLNSVIPQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQ 100
           +M       P  C HC +++++    L  H      M R   VK  F+C  C Y T    
Sbjct: 177 HMGVHTGRRPYKCPHC-DYSATRTTTLKVH------MARHTGVK-PFLCDECGYKTADKT 228

Query: 101 NMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK 141
           ++  H +IH GD+ +KC LC Y + +K +L+ H++ KH  K
Sbjct: 229 SLVRHIMIHTGDRPYKCELCHYASVRKRELKKHIERKHQKK 269

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|444516263|gb|ELV11094.1| RE1-silencing transcription factor [Tupaia chinensis]

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 15/139 (10%)

Query: 3   HWEQCLLVPLSTK-KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCKNFTS 61
           HW + L      K  TC  CN Y     + ++ H +T           P  C  C ++ +
Sbjct: 238 HWRKHLRNHFPRKVYTCGKCN-YFSDRKNNYVQHVRTHTGEK------PFKCDQC-SYVA 289

Query: 62  SDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS 121
           S+ + +  H+        P P+     C  CDY T    N + H  +H+  +QF C +C 
Sbjct: 290 SNQHEVTRHARQV--HNGPKPLN----CPHCDYKTADRSNFKKHVELHVNPRQFNCPVCD 343

Query: 122 YGAYQKEKLQFHVKNKHST 140
           Y A +K  LQ+H K+KH T
Sbjct: 344 YAASKKCNLQYHFKSKHPT 362

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
RGD|621069	1069	Rest "RE1-silencing transcript	0.902	0.121	0.273	1.4e-08
UNIPROTKB|F1M9A3	1068	Rest "RE1-silencing transcript	0.583	0.078	0.329	2.2e-08
MGI|MGI:104897	1082	Rest "RE1-silencing transcript	0.583	0.077	0.329	2.3e-08
MGI|MGI:107342	643	Zfp64 "zinc finger protein 64"	0.541	0.121	0.329	2.9e-08
UNIPROTKB|F1PT62	651	REST "Uncharacterized protein"	0.583	0.129	0.318	4e-08
RGD|1307999	495	Plagl2 "pleiomorphic adenoma g	0.625	0.181	0.307	5e-08
UNIPROTKB|J9P787	496	PLAGL2 "Uncharacterized protei	0.625	0.181	0.307	5e-08
UNIPROTKB|Q9UPG8	496	PLAGL2 "Zinc finger protein PL	0.625	0.181	0.307	5e-08
UNIPROTKB|F1MFV9	506	PLAGL2 "Uncharacterized protei	0.625	0.177	0.307	5.3e-08
UNIPROTKB|F1S523	506	LOC100624021 "Uncharacterized	0.625	0.177	0.307	5.3e-08

RGD|621069 Rest "RE1-silencing transcription factor" [Rattus norvegicus (taxid:10116)]

 Score = 143 (55.4 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 44/161 (27%), Positives = 68/161 (42%)

Query:     3 HWEQCLLVPLSTKK-TCLYCNKYVPSDIDVFIGH-----------CQTCPNMSFLNSVI- 49
             HW + L      K  TC  CN Y  ++ + ++ H           C+ CP  S   + + 
Sbjct:   261 HWRKHLRNHFPRKVYTCSKCN-YFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLT 319

Query:    50 ----------PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS 99
                       P  C  C N+ +S+ + +  H+        P P+     C  CDY T   
Sbjct:   320 RHMRTHSGEKPFKCDQC-NYVASNQHEVTRHARQVHN--GPKPLN----CPHCDYKTADR 372

Query:   100 QNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
              N + H  +H+  +QF C +C Y A +K  LQ+H K+KH T
Sbjct:   373 SNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;NAS

GO:0000785 "chromatin" evidence=IDA

GO:0001046 "core promoter sequence-specific DNA binding" evidence=ISO

GO:0001047 "core promoter binding" evidence=ISO;ISS

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=ISO;IDA

GO:0003677 "DNA binding" evidence=ISO;IDA

GO:0003682 "chromatin binding" evidence=ISO;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0008134 "transcription factor binding" evidence=ISO;IPI

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISO;ISS

GO:0010629 "negative regulation of gene expression" evidence=ISO;ISS

GO:0015271 "outward rectifier potassium channel activity" evidence=ISO;ISS

GO:0017053 "transcriptional repressor complex" evidence=ISO;IDA

GO:0032348 "negative regulation of aldosterone biosynthetic process" evidence=ISO;IMP

GO:0032403 "protein complex binding" evidence=IDA

GO:0035690 "cellular response to drug" evidence=ISO;ISS

GO:0043065 "positive regulation of apoptotic process" evidence=ISO;ISS

GO:0043234 "protein complex" evidence=IDA

GO:0043280 "positive regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO;ISS

GO:0043922 "negative regulation by host of viral transcription" evidence=ISO;ISS

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO;ISS

GO:0045665 "negative regulation of neuron differentiation" evidence=ISO;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IMP;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045955 "negative regulation of calcium ion-dependent exocytosis" evidence=IMP

GO:0046676 "negative regulation of insulin secretion" evidence=ISO;ISS

GO:0050768 "negative regulation of neurogenesis" evidence=ISO;ISS

GO:0060379 "cardiac muscle cell myoblast differentiation" evidence=ISO;ISS

GO:0070933 "histone H4 deacetylation" evidence=ISO;ISS

GO:0071257 "cellular response to electrical stimulus" evidence=ISO;ISS

GO:0071385 "cellular response to glucocorticoid stimulus" evidence=ISO;ISS

GO:2000065 "negative regulation of cortisol biosynthetic process" evidence=ISO;IMP

GO:2000706 "negative regulation of dense core granule biogenesis" evidence=IMP

GO:2000740 "negative regulation of mesenchymal stem cell differentiation" evidence=ISO

GO:2000798 "negative regulation of amniotic stem cell differentiation" evidence=ISO;ISS

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|F1M9A3 Rest "RE1-silencing transcription factor" [Rattus norvegicus (taxid:10116)]

 Score = 141 (54.7 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 30/91 (32%), Positives = 45/91 (49%)

Query:    50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
             P  C  C N+ +S+ + +  H+        P P+     C  CDY T    N + H  +H
Sbjct:   330 PFKCDQC-NYVASNQHEVTRHARQVHN--GPKPLN----CPHCDYKTADRSNFKKHVELH 382

Query:   110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
             +  +QF C +C Y A +K  LQ+H K+KH T
Sbjct:   383 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:104897 Rest "RE1-silencing transcription factor" [Mus musculus (taxid:10090)]

 Score = 141 (54.7 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 30/91 (32%), Positives = 45/91 (49%)

Query:    50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
             P  C  C N+ +S+ + +  H+        P P+     C  CDY T    N + H  +H
Sbjct:   326 PFKCDQC-NYVASNQHEVTRHARQVHN--GPKPLN----CPHCDYKTADRSNFKKHVELH 378

Query:   110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
             +  +QF C +C Y A +K  LQ+H K+KH T
Sbjct:   379 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 409

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;IDA

GO:0000785 "chromatin" evidence=ISO

GO:0001046 "core promoter sequence-specific DNA binding" evidence=ISO

GO:0001047 "core promoter binding" evidence=ISO

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=ISO;IDA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISO;IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008134 "transcription factor binding" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0010629 "negative regulation of gene expression" evidence=ISO

GO:0015271 "outward rectifier potassium channel activity" evidence=ISO

GO:0017053 "transcriptional repressor complex" evidence=ISO;IDA

GO:0032348 "negative regulation of aldosterone biosynthetic process" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0035690 "cellular response to drug" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0043280 "positive regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0043922 "negative regulation by host of viral transcription" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045665 "negative regulation of neuron differentiation" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045955 "negative regulation of calcium ion-dependent exocytosis" evidence=ISO

GO:0046676 "negative regulation of insulin secretion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0050768 "negative regulation of neurogenesis" evidence=IGI

GO:0060379 "cardiac muscle cell myoblast differentiation" evidence=IDA

GO:0070933 "histone H4 deacetylation" evidence=ISO

GO:0071257 "cellular response to electrical stimulus" evidence=ISO

GO:0071385 "cellular response to glucocorticoid stimulus" evidence=ISO

GO:2000065 "negative regulation of cortisol biosynthetic process" evidence=ISO

GO:2000706 "negative regulation of dense core granule biogenesis" evidence=ISO

GO:2000740 "negative regulation of mesenchymal stem cell differentiation" evidence=ISO

GO:2000798 "negative regulation of amniotic stem cell differentiation" evidence=ISO

MGI|MGI:107342 Zfp64 "zinc finger protein 64" [Mus musculus (taxid:10090)]

 Score = 121 (47.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
 Identities = 29/88 (32%), Positives = 45/88 (51%)

Query:    50 PQSCKHC-KNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI 108
             P  C+ C K F+  D NL M H   C   V+P    +K  C  CDY  + S +++ H  I
Sbjct:   327 PHKCEFCDKCFSRKD-NLTM-HMR-CHTSVKP----HK--CHLCDYAAVDSSSLKKHLRI 377

Query:   109 HLGDKQFKCCLCSYGAYQKEKLQFHVKN 136
             H  ++ +KC LC Y +    +L  H+++
Sbjct:   378 HSDERPYKCQLCPYASRNSSQLTVHLRS 405

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1PT62 REST "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 136 (52.9 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 29/91 (31%), Positives = 45/91 (49%)

Query:    50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH 109
             P  C  C ++ +S+ + +  H+        P P+     C  CDY T    N + H  +H
Sbjct:   330 PFKCDQC-SYVASNQHEVTRHARQVHN--GPKPLN----CPHCDYKTADRSNFKKHVELH 382

Query:   110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHST 140
             +  +QF C +C Y A +K  LQ+H K+KH T
Sbjct:   383 VNPRQFNCPVCDYAASKKCNLQYHFKSKHPT 413

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1307999 Plagl2 "pleiomorphic adenoma gene-like 2" [Rattus norvegicus (taxid:10116)]

 Score = 112 (44.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
 Identities = 28/91 (30%), Positives = 41/91 (45%)

Query:    52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
             SCK C   T      L+EH +     V     + K  C  CD      +++R H ++H G
Sbjct:   156 SCKVCLQ-TFESTQALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTG 214

Query:   112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
              K F C  C+    +K+ L  HVK  HS ++
Sbjct:   215 RKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 245

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P787 PLAGL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 112 (44.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
 Identities = 28/91 (30%), Positives = 41/91 (45%)

Query:    52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
             SCK C   T      L+EH +     V     + K  C  CD      +++R H ++H G
Sbjct:   157 SCKVCLQ-TFESTQALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTG 215

Query:   112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
              K F C  C+    +K+ L  HVK  HS ++
Sbjct:   216 RKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 246

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9UPG8 PLAGL2 "Zinc finger protein PLAGL2" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
 Identities = 28/91 (30%), Positives = 41/91 (45%)

Query:    52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
             SCK C   T      L+EH +     V     + K  C  CD      +++R H ++H G
Sbjct:   157 SCKVCLQ-TFESTQALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTG 215

Query:   112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
              K F C  C+    +K+ L  HVK  HS ++
Sbjct:   216 RKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 246

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0005634 "nucleus" evidence=IBA

GO:0006917 "induction of apoptosis" evidence=IBA

GO:0034378 "chylomicron assembly" evidence=IBA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

UNIPROTKB|F1MFV9 PLAGL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 112 (44.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
 Identities = 28/91 (30%), Positives = 41/91 (45%)

Query:    52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
             SCK C   T      L+EH +     V     + K  C  CD      +++R H ++H G
Sbjct:   167 SCKVCLQ-TFESTQALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTG 225

Query:   112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
              K F C  C+    +K+ L  HVK  HS ++
Sbjct:   226 RKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 256

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0034378 "chylomicron assembly" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1S523 LOC100624021 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 112 (44.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
 Identities = 28/91 (30%), Positives = 41/91 (45%)

Query:    52 SCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG 111
             SCK C   T      L+EH +     V     + K  C  CD      +++R H ++H G
Sbjct:   167 SCKVCLQ-TFESTQALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTG 225

Query:   112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV 142
              K F C  C+    +K+ L  HVK  HS ++
Sbjct:   226 RKDFLCQYCAQRFGRKDHLTRHVKKSHSQEL 256

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
KOG2462|consensus	279		99.96
KOG2462|consensus	279		99.95
KOG1074|consensus	958		99.81
KOG1074|consensus	958		99.77
KOG3576|consensus	267		99.75
KOG3623|consensus	1007		99.63
KOG3576|consensus	267		99.62
KOG3623|consensus	1007		99.6
KOG3608|consensus	467		99.57
KOG3608|consensus	467		99.48
PHA00733	128	hypothetical protein	99.33
PHA02768	55	hypothetical protein; Provisional	99.28
PLN03086	567	PRLI-interacting factor K; Provisional	99.25
PHA00733	128	hypothetical protein	99.12
PLN03086	567	PRLI-interacting factor K; Provisional	99.09
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.05
PHA00616	44	hypothetical protein	98.88
PHA02768	55	hypothetical protein; Provisional	98.77
PHA00616	44	hypothetical protein	98.75
PHA00732	79	hypothetical protein	98.67
KOG3993|consensus	500		98.58
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.47
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.46
KOG3993|consensus	500		98.4
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.31
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.31
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.26
PHA00732	79	hypothetical protein	98.22
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.19
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.09
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.05
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.01
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.99
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.89
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.78
smart00355	26	ZnF_C2H2 zinc finger.	97.76
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.59
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.54
smart00355	26	ZnF_C2H2 zinc finger.	97.48
PRK04860	160	hypothetical protein; Provisional	97.47
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.42
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.35
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.24
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.22
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.11
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.03
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.86
PRK04860	160	hypothetical protein; Provisional	96.77
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.29
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	96.01
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.84
COG5048	467	FOG: Zn-finger [General function prediction only]	95.71
COG5048	467	FOG: Zn-finger [General function prediction only]	95.42
KOG2893|consensus	341		95.25
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.98
COG4049	65	Uncharacterized protein containing archaeal-type C	94.69
KOG1146|consensus	1406		94.15
COG4049	65	Uncharacterized protein containing archaeal-type C	93.66
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	93.32
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.29
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	93.24
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	93.22
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	93.19
KOG2186|consensus	276		93.11
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	92.91
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	92.49
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	92.47
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	92.43
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	92.43
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	91.61
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	91.43
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	91.19
KOG1146|consensus	1406		91.12
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	90.69
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	90.57
PRK06266	178	transcription initiation factor E subunit alpha; V	89.99
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	89.84
smart00531	147	TFIIE Transcription initiation factor IIE.	89.09
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	89.08
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.84
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	88.8
PHA00626	59	hypothetical protein	88.77
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	88.6
PF00301	47	Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubred	88.36
KOG2893|consensus	341		88.03
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	87.88
COG3357	97	Predicted transcriptional regulator containing an	87.79
smart00531	147	TFIIE Transcription initiation factor IIE.	87.52
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	87.3
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	87.17
COG4888	104	Uncharacterized Zn ribbon-containing protein [Gene	86.97
cd00730	50	rubredoxin Rubredoxin; nonheme iron binding domain	86.76
COG1592	166	Rubrerythrin [Energy production and conversion]	86.65
COG1592	166	Rubrerythrin [Energy production and conversion]	86.58
PRK14873	665	primosome assembly protein PriA; Provisional	86.45
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	85.87
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	85.69
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.29
KOG2785|consensus	390		85.09
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	85.04
PRK06266	178	transcription initiation factor E subunit alpha; V	84.97
COG1198	730	PriA Primosomal protein N' (replication factor Y)	83.98
PF14353	128	CpXC: CpXC protein	83.85
KOG2231|consensus	669		83.43
COG1773	55	Rubredoxin [Energy production and conversion]	83.02
PRK09678	72	DNA-binding transcriptional regulator; Provisional	82.89
KOG4173|consensus	253		81.8
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	81.33
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	81.0
COG1198	730	PriA Primosomal protein N' (replication factor Y)	80.24

>KOG2462|consensus

Probab=99.96  E-value=4.3e-29  Score=165.37  Aligned_cols=107  Identities=22%  Similarity=0.439  Sum_probs=65.1

Q ss_pred             ceecCccCCccCCccccccc-------------cCCCCC-----------CccccCCCCCeeCCCCC-CCcch---hhhh
Q psy10073         15 KKTCLYCNKYVPSDIDVFIG-------------HCQTCP-----------NMSFLNSVIPQSCKHCK-NFTSS---DVNL   66 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H-------------~c~~c~-----------h~~~h~~~~~~~C~~C~-~f~~~---~~H~   66 (144)
                      .|.|+.||+.+.+.++|.+|             .|.+|+           |+++|+  .+++|.+|| .|...   +.|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccc
Confidence            47888888888888888774             333333           233333  455555555 55544   5555


Q ss_pred             hhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHH
Q psy10073         67 LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus        67 ~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                       ++|+||||           |.|+.|+++|.+.++|+.||++|.+.++|+|..|+|+|+..+.|.+|+.
T Consensus       208 -RTHTGEKP-----------F~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  208 -RTHTGEKP-----------FSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             -ccccCCCC-----------ccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence             55555555           6666666666666666666666666666666666666666666666654

>KOG2462|consensus

Probab=99.95  E-value=4.9e-29  Score=165.10  Aligned_cols=111  Identities=20%  Similarity=0.290  Sum_probs=90.7

Q ss_pred             eecCccCCccCCccccccccCCCCCCccccC---CCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCcee
Q psy10073         16 KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLN---SVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFI   88 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~---~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~   88 (144)
                      -..-.|++--...+....    .--|..+|-   ..+.+.|++|| .+.+.   ..|+ ++|.  -+           ..
T Consensus       128 ~~r~~c~eCgk~ysT~sn----LsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~--l~-----------c~  189 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSN----LSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHT--LP-----------CE  189 (279)
T ss_pred             CCceeccccccccccccc----cchhhcccccccccccccCCCCCceeeehHHHhhHh-hccC--CC-----------cc
Confidence            345556665555554443    111344552   35669999999 88887   8899 9997  45           99


Q ss_pred             CCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073         89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        89 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |.+||+.|.....|+.|+++|+|||||.|..|+++|+++++|+.||.+|.+.|+|+
T Consensus       190 C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  190 CGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             cccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence            99999999999999999999999999999999999999999999999999999985

>KOG1074|consensus

Probab=99.81  E-value=5.4e-21  Score=142.45  Aligned_cols=58  Identities=21%  Similarity=0.387  Sum_probs=52.5

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      .+-.|.+|.+...-.+.|+.|.++|+||+||+|.+||+.|+++.+|+.|+.+|-..-|
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~  661 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP  661 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcc
Confidence            3578999999999999999999999999999999999999999999999998875433

>KOG1074|consensus

Probab=99.77  E-value=3.8e-19  Score=132.73  Aligned_cols=57  Identities=21%  Similarity=0.372  Sum_probs=54.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ..|..|++.|...+.|..|+++|++++||.|..|++.|..+.+|+.||.+|....|.
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCC
Confidence            689999999999999999999999999999999999999999999999999976653

>KOG3576|consensus

Probab=99.75  E-value=2e-19  Score=114.85  Aligned_cols=112  Identities=20%  Similarity=0.319  Sum_probs=100.2

Q ss_pred             CCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCce
Q psy10073         12 LSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKF   87 (144)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~   87 (144)
                      ....|.|.+|++.|.....|.+       |++-|+..+.|-|..|| .|.+.   ++|+ ++|+|.+|           |
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnr-------h~kch~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrp-----------y  174 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNR-------HLKCHSDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRP-----------Y  174 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHH-------HhhhccHHHHHHHhhccCcccchhhhhhhh-ccccCccc-----------c
Confidence            3456999999999999999999       89999999999999999 99998   9999 99999999           9


Q ss_pred             eCCCCCcccCChhHHHHHHHh-hc----------CCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073         88 ICVACDYFTIISQNMRNHTLI-HL----------GDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~~~-h~----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      +|..|+++|.+.-+|..|++. |.          .++.|.|+.||.+-.....+..|++.|+..-|
T Consensus       175 kc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  175 KCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             chhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            999999999999999999754 32          25679999999999999999999999886543

>KOG3623|consensus

Probab=99.63  E-value=1e-17  Score=123.87  Aligned_cols=113  Identities=19%  Similarity=0.321  Sum_probs=93.3

Q ss_pred             eecCccCCccCCccccccccCCCCCCcccc-CCCCCeeCCCCC-CCcch---hhhhhhcccCCCCc--ccccCCCCCcee
Q psy10073         16 KTCLYCNKYVPSDIDVFIGHCQTCPNMSFL-NSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPC--MVRPDPVKYKFI   88 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h-~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~--~~~~~~~~~~~~   88 (144)
                      ..|++|+..+.....|+.|+      +-.| ..+..|.|..|. +|...   .+|| .+|....+-  ........+.|+
T Consensus       211 ltcpycdrgykrltslkeHi------kyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFK  283 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHI------KYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFK  283 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHH------HHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhcccc
Confidence            68999999999999999953      2233 345669999999 99888   8899 888644331  112234566799


Q ss_pred             CCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHH
Q psy10073         89 CVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus        89 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      |.+|+++|..+..|..|+++|.|+|||.|+.|+|.|+...++..|+.
T Consensus       284 CtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  284 CTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             ccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            99999999999999999999999999999999999999999999975

>KOG3576|consensus

Probab=99.62  E-value=8.6e-17  Score=102.94  Aligned_cols=81  Identities=26%  Similarity=0.456  Sum_probs=74.6

Q ss_pred             CCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         47 SVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        47 ~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      +...|.|.+|+ .|...   .+|+ +-|...+.           +-|..||+.|.+..+|.+|+++|+|.+||+|..|++
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr-----------~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~k  181 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKR-----------HLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEK  181 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHh-hhccHHHH-----------HHHhhccCcccchhhhhhhhccccCccccchhhhhH
Confidence            34569999999 99887   8999 99988888           999999999999999999999999999999999999


Q ss_pred             hccChHHHHHHHHhhcC
Q psy10073        123 GAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       123 ~f~~~~~l~~H~~~h~~  139 (144)
                      +|+++-+|..|++.-+|
T Consensus       182 aftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  182 AFTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHHhhccHHHHHHHHcC
Confidence            99999999999886555

>KOG3623|consensus

Probab=99.60  E-value=1.6e-16  Score=117.62  Aligned_cols=77  Identities=22%  Similarity=0.460  Sum_probs=71.4

Q ss_pred             CCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         47 SVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        47 ~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      .+.+|.|+.|+ .|...   .+|. ..|+|.+|           |.|.+|.++|..+..|..|.+.|.|+|||+|+.|+|
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHK-YEHsGqRP-----------yqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClK  958 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHK-YEHSGQRP-----------YQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLK  958 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhh-hhhcCCCC-----------cccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhh
Confidence            45679999999 88776   8898 89999999           999999999999999999999999999999999999


Q ss_pred             hccChHHHHHHHH
Q psy10073        123 GAYQKEKLQFHVK  135 (144)
Q Consensus       123 ~f~~~~~l~~H~~  135 (144)
                      .|+...++.+||.
T Consensus       959 RFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  959 RFSHSGSYSQHMN  971 (1007)
T ss_pred             hcccccchHhhhc
Confidence            9999999999985

>KOG3608|consensus

Probab=99.57  E-value=6e-16  Score=106.40  Aligned_cols=116  Identities=19%  Similarity=0.292  Sum_probs=73.4

Q ss_pred             eecC--ccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhh-cccCCCCccc----------
Q psy10073         16 KTCL--YCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLM-EHSENCPCMV----------   78 (144)
Q Consensus        16 ~~C~--~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~-~h~~~~~~~~----------   78 (144)
                      +.|.  .|-+.|.++..|++       |.++|++++...|+.|| -|.+.   ..|+++ +-....+|.|          
T Consensus       178 ~~C~W~~Ct~~~~~k~~Lre-------H~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTe  250 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLRE-------HIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATE  250 (467)
T ss_pred             eeccchhhhhhhccHHHHHH-------HHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHH
Confidence            5554  47788888888888       77888888888888888 77666   556521 1122334444          


Q ss_pred             ---c--cCCCCCceeCCCCCcccCChhHHHHHHHh-hcCCcceeCCCcchhccChHHHHHHHHhhc
Q psy10073         79 ---R--PDPVKYKFICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus        79 ---~--~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                         +  +..-..-|+|+.|+......++|..|++. |..++||+|+.|++.|.+.++|.+|..+|+
T Consensus       251 klL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  251 KLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence               0  00111226677776666666777777654 556667777777777777777777766665

>KOG3608|consensus

Probab=99.48  E-value=2.8e-14  Score=98.28  Aligned_cols=105  Identities=21%  Similarity=0.346  Sum_probs=70.1

Q ss_pred             eecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCC
Q psy10073         16 KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVA   91 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~   91 (144)
                      |+|+.|+.+....++|.+|+      +-.|+..+||+|+.|+ .|...   .+|. .+|+ +..           |.|..
T Consensus       264 ykCplCdmtc~~~ssL~~H~------r~rHs~dkpfKCd~Cd~~c~~esdL~kH~-~~HS-~~~-----------y~C~h  324 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHI------RYRHSKDKPFKCDECDTRCVRESDLAKHV-QVHS-KTV-----------YQCEH  324 (467)
T ss_pred             ccccccccCCCChHHHHHHH------HhhhccCCCccccchhhhhccHHHHHHHH-Hhcc-ccc-----------eecCC
Confidence            55666666665555665522      2346667777777777 66555   6676 6665 334           77866


Q ss_pred             --CCcccCChhHHHHHHHhhc-CC--cceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         92 --CDYFTIISQNMRNHTLIHL-GD--KQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        92 --C~~~f~~~~~l~~H~~~h~-~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                        |..+|.+...+++|++.+. |.  .+|.|-.|++.|++..+|..|+...++
T Consensus       325 ~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  325 PDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             CCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence              8888888888888865533 43  348888888888888888888765554

>PHA00733 hypothetical protein

Probab=99.33  E-value=1e-12  Score=80.43  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=63.8

Q ss_pred             CCCCeeCCCCC-CCcch---hhh--h--hhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         47 SVIPQSCKHCK-NFTSS---DVN--L--LMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        47 ~~~~~~C~~C~-~f~~~---~~H--~--~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      ..+++.|.+|+ .|...   ..+  +  ...+.+++|           |.|+.|++.|.+...|..|++.+  +.+|.|.
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kP-----------y~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSP-----------YVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCC-----------ccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            45678899998 77666   222  1  012233566           99999999999999999999876  3579999


Q ss_pred             CcchhccChHHHHHHHHhhcCC
Q psy10073        119 LCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       119 ~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      .|++.|.....|..|+...++.
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcCc
Confidence            9999999999999999887763

>PHA02768 hypothetical protein; Provisional

Probab=99.28  E-value=1.3e-12  Score=67.12  Aligned_cols=43  Identities=19%  Similarity=0.291  Sum_probs=40.3

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQ  131 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  131 (144)
                      |.|++||+.|...++|..|+++|+  ++|+|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            899999999999999999999998  7999999999999887764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.25  E-value=1.1e-11  Score=91.76  Aligned_cols=99  Identities=16%  Similarity=0.303  Sum_probs=76.2

Q ss_pred             CceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeCC
Q psy10073         14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFICV   90 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C~   90 (144)
                      +.+.|+.|++.|. ..+|..       |+.++.  .++.|+ || .+...  ..|+ .+|.+.++           +.|.
T Consensus       452 ~H~~C~~Cgk~f~-~s~Lek-------H~~~~H--kpv~Cp-Cg~~~~R~~L~~H~-~thCp~Kp-----------i~C~  508 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEK-------HMKVFH--EPLQCP-CGVVLEKEQMVQHQ-ASTCPLRL-----------ITCR  508 (567)
T ss_pred             cCccCCCCCCccc-hHHHHH-------HHHhcC--CCccCC-CCCCcchhHHHhhh-hccCCCCc-----------eeCC
Confidence            3467888888775 466777       666663  789999 99 76555  7888 88888888           9999


Q ss_pred             CCCcccCC----------hhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhh
Q psy10073         91 ACDYFTII----------SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus        91 ~C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      .|++.|..          ...|..|.... |.+++.|..||+.+..+ .+..|+..-
T Consensus       509 fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        509 FCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             CCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHh
Confidence            99998852          35788998885 78999999999887655 667786543

>PHA00733 hypothetical protein

Probab=99.12  E-value=5.8e-11  Score=72.75  Aligned_cols=86  Identities=13%  Similarity=0.134  Sum_probs=65.7

Q ss_pred             CCCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCC
Q psy10073         10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKY   85 (144)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~   85 (144)
                      .+..+.+.|.+|+..|.....|..+. ....++.. .+.+||.|+.|| .|...   ..|+ +.+  +.+          
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h--~~~----------   99 (128)
T PHA00733         35 TPEQKRLIRAVVKTLIYNPQLLDESS-YLYKLLTS-KAVSPYVCPLCLMPFSSSVSLKQHI-RYT--EHS----------   99 (128)
T ss_pred             ChhhhhHHHHHHhhhccChhhhcchH-HHHhhccc-CCCCCccCCCCCCcCCCHHHHHHHH-hcC--CcC----------
Confidence            55577899999999999887777630 00002333 458899999999 99988   7788 655  346          


Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                       |.|+.|++.|.....|..|+...++
T Consensus       100 -~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        100 -KVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             -ccCCCCCCccCCHHHHHHHHHHhcC
Confidence             9999999999999999999876543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.09  E-value=2.8e-10  Score=84.41  Aligned_cols=111  Identities=16%  Similarity=0.372  Sum_probs=83.7

Q ss_pred             ceecCccCCccCCccccccc---------cCCC--CCC-ccccCCCCCeeCCCCC-CCcch--hhhhhhcccCCCCcccc
Q psy10073         15 KKTCLYCNKYVPSDIDVFIG---------HCQT--CPN-MSFLNSVIPQSCKHCK-NFTSS--DVNLLMEHSENCPCMVR   79 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H---------~c~~--c~h-~~~h~~~~~~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~   79 (144)
                      .-.|+.|...... .+|..|         .|..  ||. .+....+..+.|+.|+ .|...  ..|+ .+++  ++    
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~~s~LekH~-~~~H--kp----  478 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQQGEMEKHM-KVFH--EP----  478 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccchHHHHHHH-HhcC--CC----
Confidence            3578888877665 456676         2331  553 2334456678999999 88755  8899 7764  67    


Q ss_pred             cCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhcc----------ChHHHHHHHHhhcCCCCC
Q psy10073         80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAY----------QKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        80 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~kp~  143 (144)
                             +.|+ |++.+ ....|..|+.+|...+++.|..|++.|.          ..+.|..|..+. |.+++
T Consensus       479 -------v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~  542 (567)
T PLN03086        479 -------LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTA  542 (567)
T ss_pred             -------ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcce
Confidence                   9999 99765 6689999999999999999999999985          245899998885 66665

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.05  E-value=1.2e-10  Score=51.42  Aligned_cols=26  Identities=35%  Similarity=0.700  Sum_probs=23.2

Q ss_pred             HHHHHHHhhcCCcceeCCCcchhccC
Q psy10073        101 NMRNHTLIHLGDKQFKCCLCSYGAYQ  126 (144)
Q Consensus       101 ~l~~H~~~h~~~~~~~C~~C~~~f~~  126 (144)
                      +|..|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999864

...

>PHA00616 hypothetical protein

Probab=98.88  E-value=1.3e-09  Score=53.45  Aligned_cols=34  Identities=12%  Similarity=0.220  Sum_probs=24.6

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+|+.||+.|...+.|..|++.|++++++.|+.-
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            6777777777777777777777777777776643

>PHA02768 hypothetical protein; Provisional

Probab=98.77  E-value=1.2e-09  Score=56.25  Aligned_cols=39  Identities=13%  Similarity=0.193  Sum_probs=29.8

Q ss_pred             ceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS   62 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~   62 (144)
                      .|.|+.||+.|...++|..       |+++|.  ++|+|..|+ .|...
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~-------H~r~H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          5 GYECPICGEIYIKRKSMIT-------HLRKHN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             ccCcchhCCeeccHHHHHH-------HHHhcC--CcccCCcccceeccc
Confidence            4788888888888888888       777777  577888888 66543

>PHA00616 hypothetical protein

Probab=98.75  E-value=3e-09  Score=52.19  Aligned_cols=30  Identities=17%  Similarity=0.266  Sum_probs=28.5

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ||+|+.||+.|.+.++|.+|++.|+|++|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            689999999999999999999999999886

>PHA00732 hypothetical protein

Probab=98.67  E-value=1.7e-08  Score=56.57  Aligned_cols=46  Identities=24%  Similarity=0.483  Sum_probs=37.0

Q ss_pred             eeCCCCCcccCChhHHHHHHHh-hcCCcceeCCCcchhccChHHHHHHHHhhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLI-HLGDKQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |.|+.|++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|..++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            8899999999999999999874 55   357999999997   4777776544

>KOG3993|consensus

Probab=98.58  E-value=1.2e-08  Score=72.41  Aligned_cols=26  Identities=19%  Similarity=0.339  Sum_probs=23.3

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      -|.|..|++.|.....|+.|+.+|+.
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            48999999999999999999888764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.47  E-value=4e-07  Score=47.42  Aligned_cols=50  Identities=24%  Similarity=0.481  Sum_probs=39.6

Q ss_pred             eeCCCCCcccCChhHHHHHHHh-hcCC-cceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         87 FICVACDYFTIISQNMRNHTLI-HLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      |.||+|++ ..+...|..|... |..+ +.+.|++|...+.  .+|..|+..+++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            89999999 5567889999765 5443 4699999998655  489999988764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.46  E-value=1.4e-07  Score=40.33  Aligned_cols=23  Identities=26%  Similarity=0.629  Sum_probs=14.5

Q ss_pred             eeCCCcchhccChHHHHHHHHhh
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      |.|+.|++.|.+.+.|.+|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=98.40  E-value=8.5e-08  Score=68.19  Aligned_cols=86  Identities=19%  Similarity=0.314  Sum_probs=54.5

Q ss_pred             eecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccC--------CCCccc-----
Q psy10073         16 KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSE--------NCPCMV-----   78 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~--------~~~~~~-----   78 (144)
                      |.|..|...|...-.|.+|.|..       .....|+|++|+ .|.-.   ..|. +.|..        ..|-+-     
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~R-------IV~vEYrCPEC~KVFsCPANLASHR-RWHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPR-------IVHVEYRCPECDKVFSCPANLASHR-RWHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCe-------eEEeeecCCcccccccCchhhhhhh-cccCCchhhhhcCCCChhhhhhhh
Confidence            77888888888888888865431       112347788888 77766   5666 55532        111110     


Q ss_pred             ---------ccCCCCCceeCCCCCcccCChhHHHHHHHhh
Q psy10073         79 ---------RPDPVKYKFICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        79 ---------~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                               -..+.+..|.|.+|++.|.+..-|+.|+.+|
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlth  379 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTH  379 (500)
T ss_pred             hhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhh
Confidence                     0113445688888888888888888886654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.31  E-value=3.3e-07  Score=40.31  Aligned_cols=22  Identities=18%  Similarity=0.392  Sum_probs=13.1

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI   97 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~   97 (144)
                      .|+ ++|++++|           |.|++|++.|.
T Consensus         4 ~H~-~~H~~~k~-----------~~C~~C~k~F~   25 (26)
T PF13465_consen    4 RHM-RTHTGEKP-----------YKCPYCGKSFS   25 (26)
T ss_dssp             HHH-HHHSSSSS-----------EEESSSSEEES
T ss_pred             HHh-hhcCCCCC-----------CCCCCCcCeeC
Confidence            455 55666666           66666666554

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.31  E-value=4.9e-07  Score=38.53  Aligned_cols=23  Identities=22%  Similarity=0.428  Sum_probs=21.3

Q ss_pred             eeCCCCCcccCChhHHHHHHHhh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.26  E-value=9.7e-07  Score=37.81  Aligned_cols=24  Identities=29%  Similarity=0.707  Sum_probs=14.2

Q ss_pred             eeCCCcchhccChHHHHHHHHhhc
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |.|++|++.|.+...|..|+.+|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666553

...

>PHA00732 hypothetical protein

Probab=98.22  E-value=5.7e-07  Score=50.40  Aligned_cols=46  Identities=9%  Similarity=0.183  Sum_probs=34.8

Q ss_pred             ceecCccCCccCCccccccccCCCCCCccc-cCCCCCeeCCCCC-CCcchhhhhhhccc
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPNMSF-LNSVIPQSCKHCK-NFTSSDVNLLMEHS   71 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~-h~~~~~~~C~~C~-~f~~~~~H~~~~h~   71 (144)
                      +|.|+.||+.|.+..+|..       |++. |.   ++.|+.|| .|.....|+ .+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~-------H~r~~H~---~~~C~~CgKsF~~l~~H~-~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQ-------HARRNHT---LTKCPVCNKSYRRLNQHF-YSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHH-------HhhcccC---CCccCCCCCEeCChhhhh-cccC
Confidence            4789999999999999998       6663 54   35799999 887667777 5543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.19  E-value=1e-06  Score=39.09  Aligned_cols=25  Identities=20%  Similarity=0.331  Sum_probs=15.4

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhc
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.09  E-value=3.4e-06  Score=49.34  Aligned_cols=24  Identities=33%  Similarity=0.649  Sum_probs=19.6

Q ss_pred             ceeCCCcchhccChHHHHHHHHhh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            688999999999999999998864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.05  E-value=6.5e-06  Score=42.82  Aligned_cols=46  Identities=22%  Similarity=0.364  Sum_probs=24.1

Q ss_pred             eeCCCCC-CCcch--hhhhhhcccCC-CCcccccCCCCCceeCCCCCcccCChhHHHHHHHhh
Q psy10073         51 QSCKHCK-NFTSS--DVNLLMEHSEN-CPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        51 ~~C~~C~-~f~~~--~~H~~~~h~~~-~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      |.|+.|+ .|...  ..|....|..+ +.           +.|++|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~~~~~~~L~~H~~~~H~~~~~~-----------v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGKGFSESSLVEHCEDEHRSESKN-----------VVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCCccCHHHHHHHHHhHCcCCCCC-----------ccCCCchhhhh--hHHHHHHHHh
Confidence            5566666 55444  55553334332 22           66666665433  3666666544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.01  E-value=6.4e-06  Score=35.14  Aligned_cols=23  Identities=26%  Similarity=0.469  Sum_probs=19.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      |.|++|++.|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.99  E-value=9.3e-06  Score=40.81  Aligned_cols=33  Identities=21%  Similarity=0.360  Sum_probs=21.9

Q ss_pred             cCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073        110 LGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       110 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      ..+.|-.|++|+..+.+..+|.+|+.+.++.||
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            346678888888888888888888888888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.89  E-value=8.5e-06  Score=36.02  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=22.8

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3899999999999999999998775

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.78  E-value=7.2e-06  Score=56.72  Aligned_cols=52  Identities=23%  Similarity=0.471  Sum_probs=43.5

Q ss_pred             CCceeCCC--CCcccCChhHHHHHHHh-h------------------cCCcceeCCCcchhccChHHHHHHHH
Q psy10073         84 KYKFICVA--CDYFTIISQNMRNHTLI-H------------------LGDKQFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus        84 ~~~~~C~~--C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      +++|+|++  |++.|.+...|.-|+.- |                  ...|||.|++|+|.+++...|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            36799987  99999999999999753 2                  12589999999999999999988864

>smart00355 ZnF_C2H2 zinc finger

Probab=97.76  E-value=2.9e-05  Score=33.55  Aligned_cols=24  Identities=21%  Similarity=0.430  Sum_probs=14.7

Q ss_pred             eeCCCcchhccChHHHHHHHHhhc
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |.|..|++.|.+.+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356666666666666666666543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.59  E-value=6.8e-05  Score=32.09  Aligned_cols=23  Identities=43%  Similarity=0.866  Sum_probs=13.6

Q ss_pred             eeCCCcchhccChHHHHHHHHhhc
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |+|+.|+.... ...|.+|+++++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56666766665 666777766654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.54  E-value=6e-05  Score=32.56  Aligned_cols=22  Identities=23%  Similarity=0.594  Sum_probs=15.4

Q ss_pred             eeCCCcchhccChHHHHHHHHh
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5677777777777777777654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.48  E-value=0.00012  Score=31.47  Aligned_cols=24  Identities=17%  Similarity=0.425  Sum_probs=21.5

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998765

>PRK04860 hypothetical protein; Provisional

Probab=97.47  E-value=8e-05  Score=47.44  Aligned_cols=40  Identities=20%  Similarity=0.512  Sum_probs=34.8

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChH
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKE  128 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  128 (144)
                      .+|.|. |+.   ....+++|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            469998 987   6778899999999999999999999887543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.42  E-value=0.00025  Score=35.76  Aligned_cols=28  Identities=29%  Similarity=0.344  Sum_probs=22.0

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      -.|++|+..+.+..+|++|+.+.++.+|
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCcchhhccchhhHHHHHHHHhcccC
Confidence            8999999999999999999988877765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.35  E-value=8.5e-05  Score=51.58  Aligned_cols=23  Identities=17%  Similarity=0.300  Sum_probs=19.2

Q ss_pred             CceeCCCCCcccCChhHHHHHHH
Q psy10073         85 YKFICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      +||+|++|++.|.....|.-|+.
T Consensus       397 KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         397 KPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceeccccchhhccCccceeccc
Confidence            33999999999999988887753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.24  E-value=0.00023  Score=30.67  Aligned_cols=23  Identities=22%  Similarity=0.413  Sum_probs=20.7

Q ss_pred             eeCCCCCcccCChhHHHHHHHhh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999998754

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.22  E-value=0.00033  Score=40.76  Aligned_cols=69  Identities=20%  Similarity=0.307  Sum_probs=21.4

Q ss_pred             ecCccCCccCCccccccccCCCCCCccc-cCCCCCeeCCCCCCCcch---hhhhhhcccCCCCcccccCCCCCceeCCCC
Q psy10073         17 TCLYCNKYVPSDIDVFIGHCQTCPNMSF-LNSVIPQSCKHCKNFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVAC   92 (144)
Q Consensus        17 ~C~~C~~~f~~~~~l~~H~c~~c~h~~~-h~~~~~~~C~~C~~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C   92 (144)
                      .|..|+..|.+...|..       |+.. |.-..+    ....+...   ...+ ..-.. ..           +.|..|
T Consensus         1 ~C~~C~~~f~~~~~l~~-------H~~~~H~~~~~----~~~~l~~~~~~~~~~-~~~~~-~~-----------~~C~~C   56 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQ-------HMKKKHGFDIP----DQKYLVDPNRLLNYL-RKKVK-ES-----------FRCPYC   56 (100)
T ss_dssp             -------------------------------------------------------------SS-----------EEBSSS
T ss_pred             Ccccccccccccccccc-------ccccccccccc----ccccccccccccccc-ccccC-CC-----------CCCCcc
Confidence            48899999999999999       5543 332221    11111111   2222 11111 13           999999


Q ss_pred             CcccCChhHHHHHHHhh
Q psy10073         93 DYFTIISQNMRNHTLIH  109 (144)
Q Consensus        93 ~~~f~~~~~l~~H~~~h  109 (144)
                      ++.|.+...|..|++.+
T Consensus        57 ~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   57 NKTFRSREALQEHMRSK   73 (100)
T ss_dssp             S-EESSHHHHHHHHHHT
T ss_pred             CCCCcCHHHHHHHHcCc
Confidence            99999999999999874

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.11  E-value=0.00055  Score=29.17  Aligned_cols=23  Identities=30%  Similarity=0.635  Sum_probs=18.3

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      |.|+.|+.... ...|.+|++.+.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999999888 889999998764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.03  E-value=0.00013  Score=32.22  Aligned_cols=20  Identities=30%  Similarity=0.732  Sum_probs=10.1

Q ss_pred             eeCCCCCcccCChhHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~  106 (144)
                      |.|..|++.|.+...|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            44555555555555555444

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.86  E-value=0.0004  Score=30.55  Aligned_cols=23  Identities=30%  Similarity=0.505  Sum_probs=19.5

Q ss_pred             ceeCCCcchhccChHHHHHHHHh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      .|.|..|++.|.+...|..|++.
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCCcccCCCCcCCHHHHHHHHcc
Confidence            05799999999999999998875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.77  E-value=0.00047  Score=43.97  Aligned_cols=37  Identities=16%  Similarity=0.373  Sum_probs=26.8

Q ss_pred             CeeCCCCC-CCcchhhhhhhcccCCCCcccccCCCCCceeCCCCCcccCCh
Q psy10073         50 PQSCKHCK-NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIIS   99 (144)
Q Consensus        50 ~~~C~~C~-~f~~~~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~   99 (144)
                      +|.|. |+ ...+..+|. ++|.++++           |.|..|+..|...
T Consensus       119 ~Y~C~-C~~~~~~~rrH~-ri~~g~~~-----------YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQEHQLTVRRHN-RVVRGEAV-----------YRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCCeeCHHHHHH-HHhcCCcc-----------EECCCCCceeEEe
Confidence            58887 87 433337787 88888887           8888888777654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.29  E-value=0.004  Score=26.83  Aligned_cols=18  Identities=17%  Similarity=0.359  Sum_probs=8.8

Q ss_pred             eCCCCCcccCChhHHHHHH
Q psy10073         88 ICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~  106 (144)
                      .|+.||+.| ..+.|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 344444443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=96.01  E-value=0.0054  Score=28.50  Aligned_cols=22  Identities=27%  Similarity=0.520  Sum_probs=15.3

Q ss_pred             ceeCCCcchhccChHHHHHHHH
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      +|.|++|++.|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.84  E-value=0.0089  Score=27.72  Aligned_cols=23  Identities=17%  Similarity=0.242  Sum_probs=20.4

Q ss_pred             ceeCCCCCcccCChhHHHHHHHh
Q psy10073         86 KFICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      +|.|+.|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            38999999999999999999754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.71  E-value=0.0087  Score=43.60  Aligned_cols=119  Identities=18%  Similarity=0.155  Sum_probs=75.4

Q ss_pred             CceecCccCCccCCccccccccCCCCCCcc--ccCCC--CCeeCC--CCC-CCcch---hhhhhhcccCCCCccc-----
Q psy10073         14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMS--FLNSV--IPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMV-----   78 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~--~h~~~--~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~-----   78 (144)
                      .++.|..|...|.....|..       |.+  .|.++  +++.|+  .|+ .|...   ..|. ..|.+..++.+     
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~-------~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  359 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTR-------HLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI-LLHTSISPAKEKLLNS  359 (467)
T ss_pred             cCCCCccccCCccccccccc-------cccccccccccCCceeeeccCCCccccccccccCCc-ccccCCCccccccccC
Confidence            46899999999999999999       777  79999  999999  799 88877   7777 77776655432     


Q ss_pred             -------------------ccCCCCCceeC--CCCCcccCChhHHHHHHHhhcCCc--ceeCCCcchhccChHHHHHHHH
Q psy10073         79 -------------------RPDPVKYKFIC--VACDYFTIISQNMRNHTLIHLGDK--QFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus        79 -------------------~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                                         ........+.+  ..|...+.....+..|...+....  .+.+..|.+.|.....+..|++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (467)
T COG5048         360 SSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKK  439 (467)
T ss_pred             ccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccc
Confidence                               00011111222  113344444444445544444433  3455667777777666666666


Q ss_pred             hhcCC
Q psy10073        136 NKHST  140 (144)
Q Consensus       136 ~h~~~  140 (144)
                      .+...
T Consensus       440 ~~~~~  444 (467)
T COG5048         440 IHTNH  444 (467)
T ss_pred             ccccC
Confidence            65543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.42  E-value=0.0029  Score=46.11  Aligned_cols=59  Identities=22%  Similarity=0.295  Sum_probs=53.4

Q ss_pred             CceeCCCCCcccCChhHHHHHHH--hhcCC--cceeCC--CcchhccChHHHHHHHHhhcCCCCC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTL--IHLGD--KQFKCC--LCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ..+.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|..+|.+.++.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc
Confidence            35899999999999999999999  89999  999999  7999999999999999999887653

>KOG2893|consensus

Probab=95.25  E-value=0.0049  Score=41.45  Aligned_cols=46  Identities=22%  Similarity=0.410  Sum_probs=35.8

Q ss_pred             eCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHH-HHhh
Q psy10073         88 ICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH-VKNK  137 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  137 (144)
                      .|=+|++.|.+..-|.+|++    .+-|+|.+|.+..-+-..|..| +.+|
T Consensus        12 wcwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhh
Confidence            57789999999988988876    4568999998887777777777 3343

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.98  E-value=0.017  Score=26.62  Aligned_cols=24  Identities=21%  Similarity=0.713  Sum_probs=17.0

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      |.|..||..+....            .++.|++||.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            78888887765432            5778888874

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.69  E-value=0.025  Score=29.11  Aligned_cols=25  Identities=12%  Similarity=0.126  Sum_probs=14.3

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHH
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      ++..+.|+.|+..|....++.+|..
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhh
Confidence            3444566666666666666666653

>KOG1146|consensus

Probab=94.15  E-value=0.032  Score=46.05  Aligned_cols=55  Identities=18%  Similarity=0.455  Sum_probs=45.8

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhh-------------------------cCCcceeCCCcchhccChHHHHHHHHh
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIH-------------------------LGDKQFKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      .-.+.+.|+.|+..|.....|..|++.-                         .+.++|.|..|..+++.+.+|.+|+..
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            3346699999999999999999999871                         124579999999999999999999863

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.66  E-value=0.039  Score=28.37  Aligned_cols=31  Identities=19%  Similarity=0.404  Sum_probs=24.9

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      -.||.-+.|+.|+..|....++.+|...-++
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3567788999999999999999999765443

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=93.32  E-value=0.051  Score=25.74  Aligned_cols=14  Identities=14%  Similarity=0.185  Sum_probs=8.3

Q ss_pred             eecCccCCccCCcc
Q psy10073         16 KTCLYCNKYVPSDI   29 (144)
Q Consensus        16 ~~C~~C~~~f~~~~   29 (144)
                      +.|+.|+..|.-..
T Consensus         3 ~~CP~C~~~~~v~~   16 (38)
T TIGR02098         3 IQCPNCKTSFRVVD   16 (38)
T ss_pred             EECCCCCCEEEeCH
Confidence            45667776665443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.29  E-value=0.16  Score=30.37  Aligned_cols=24  Identities=13%  Similarity=0.285  Sum_probs=13.3

Q ss_pred             ceeCCCcchhccChHHHHHHHHhh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      .|.|+.|...|-..-+.-.|...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            456666666665555555555444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=93.24  E-value=0.081  Score=35.56  Aligned_cols=21  Identities=24%  Similarity=0.191  Sum_probs=15.1

Q ss_pred             CCceecCccCCccCCcccccc
Q psy10073         13 STKKTCLYCNKYVPSDIDVFI   33 (144)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~   33 (144)
                      .+.+.|++|++.|.+..-...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~   23 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSG   23 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcC
Confidence            356789999999988654443

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=93.22  E-value=0.079  Score=24.91  Aligned_cols=32  Identities=22%  Similarity=0.349  Sum_probs=17.5

Q ss_pred             eecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CC
Q psy10073         16 KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NF   59 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f   59 (144)
                      ..|+.|+..|.-..+...            ......+|+.|+ .|
T Consensus         3 i~Cp~C~~~y~i~d~~ip------------~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKIP------------PKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHCC------------CCCcEEECCCCCCEe
Confidence            356777766655443222            233456677776 55

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=93.19  E-value=0.11  Score=24.56  Aligned_cols=34  Identities=15%  Similarity=0.398  Sum_probs=24.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhcc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAY  125 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  125 (144)
                      ..|+.|+..|.-...-     +-.+....+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcEEECCCCCcEee
Confidence            6789999888776542     223455788999987774

>KOG2186|consensus

Probab=93.11  E-value=0.052  Score=36.92  Aligned_cols=45  Identities=18%  Similarity=0.368  Sum_probs=31.3

Q ss_pred             eeCCCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhh
Q psy10073         51 QSCKHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        51 ~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      |.|..|| ...-+  .+|+ ..-++. -           |.|..|++.|.. .++..|...-
T Consensus         4 FtCnvCgEsvKKp~vekH~-srCrn~-~-----------fSCIDC~k~F~~-~sYknH~kCI   51 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQVEKHM-SRCRNA-Y-----------FSCIDCGKTFER-VSYKNHTKCI   51 (276)
T ss_pred             EehhhhhhhccccchHHHH-HhccCC-e-----------eEEeeccccccc-chhhhhhhhc
Confidence            6788888 76666  6677 555552 2           888888888877 6677776543

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=92.91  E-value=0.067  Score=26.07  Aligned_cols=13  Identities=15%  Similarity=0.342  Sum_probs=8.9

Q ss_pred             ceecCccCCccCC
Q psy10073         15 KKTCLYCNKYVPS   27 (144)
Q Consensus        15 ~~~C~~C~~~f~~   27 (144)
                      .|.|..||..|..
T Consensus         5 ey~C~~Cg~~fe~   17 (42)
T PF09723_consen    5 EYRCEECGHEFEV   17 (42)
T ss_pred             EEEeCCCCCEEEE
Confidence            3777777777754

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=92.49  E-value=0.086  Score=25.28  Aligned_cols=13  Identities=15%  Similarity=0.360  Sum_probs=9.0

Q ss_pred             ceecCccCCccCC
Q psy10073         15 KKTCLYCNKYVPS   27 (144)
Q Consensus        15 ~~~C~~C~~~f~~   27 (144)
                      .|+|..||..|..
T Consensus         5 ~y~C~~Cg~~fe~   17 (41)
T smart00834        5 EYRCEDCGHTFEV   17 (41)
T ss_pred             EEEcCCCCCEEEE
Confidence            4677778777753

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=92.47  E-value=0.041  Score=37.61  Aligned_cols=89  Identities=15%  Similarity=0.228  Sum_probs=49.8

Q ss_pred             cccCCCCCeeCCCCCCCcch---hhhhhhcc--cCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHh----hcCCc
Q psy10073         43 SFLNSVIPQSCKHCKNFTSS---DVNLLMEH--SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI----HLGDK  113 (144)
Q Consensus        43 ~~h~~~~~~~C~~C~~f~~~---~~H~~~~h--~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~----h~~~~  113 (144)
                      ....|.+.|+|..|..|.-.   -.|+ ..-  .....|+|..-+....|.|..|.-.|-.     .|++.    -...+
T Consensus       135 vw~hGGrif~CsfC~~flCEDDQFEHQ-AsCQvLe~E~~KC~SCNrlGq~sCLRCK~cfCd-----dHvrrKg~ky~k~k  208 (314)
T PF06524_consen  135 VWDHGGRIFKCSFCDNFLCEDDQFEHQ-ASCQVLESETFKCQSCNRLGQYSCLRCKICFCD-----DHVRRKGFKYEKGK  208 (314)
T ss_pred             cccCCCeEEEeecCCCeeeccchhhhh-hhhhhhhcccccccccccccchhhhheeeeehh-----hhhhhcccccccCC
Confidence            34467788999999844443   5565 321  1223444444344444555555555533     34433    12347


Q ss_pred             ceeCCCcchhccChHHHHHHHHhh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      ++.|+.||........|..-.++|
T Consensus       209 ~~PCPKCg~et~eTkdLSmStR~h  232 (314)
T PF06524_consen  209 PIPCPKCGYETQETKDLSMSTRSH  232 (314)
T ss_pred             CCCCCCCCCcccccccceeeeecc
Confidence            889999998777666665444433

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=92.43  E-value=0.21  Score=26.13  Aligned_cols=8  Identities=25%  Similarity=0.821  Sum_probs=5.2

Q ss_pred             CeeCCCCC
Q psy10073         50 PQSCKHCK   57 (144)
Q Consensus        50 ~~~C~~C~   57 (144)
                      .|.|+.||
T Consensus        27 ~F~CPnCG   34 (61)
T COG2888          27 KFPCPNCG   34 (61)
T ss_pred             EeeCCCCC
Confidence            46666666

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=92.43  E-value=0.034  Score=37.35  Aligned_cols=13  Identities=31%  Similarity=0.999  Sum_probs=9.3

Q ss_pred             eeCCCcchhccCh
Q psy10073        115 FKCCLCSYGAYQK  127 (144)
Q Consensus       115 ~~C~~C~~~f~~~  127 (144)
                      ..|+.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5788888776643

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=91.61  E-value=0.12  Score=26.26  Aligned_cols=13  Identities=15%  Similarity=0.416  Sum_probs=9.6

Q ss_pred             ceecCccCCccCC
Q psy10073         15 KKTCLYCNKYVPS   27 (144)
Q Consensus        15 ~~~C~~C~~~f~~   27 (144)
                      .|+|..||..|..
T Consensus         5 ey~C~~Cg~~fe~   17 (52)
T TIGR02605         5 EYRCTACGHRFEV   17 (52)
T ss_pred             EEEeCCCCCEeEE
Confidence            4788888887764

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=91.43  E-value=0.14  Score=23.70  Aligned_cols=24  Identities=25%  Similarity=0.721  Sum_probs=16.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      |.|..||..+...            +.|..|++||.
T Consensus         3 ~~C~~CG~i~~g~------------~~p~~CP~Cg~   26 (34)
T cd00729           3 WVCPVCGYIHEGE------------EAPEKCPICGA   26 (34)
T ss_pred             EECCCCCCEeECC------------cCCCcCcCCCC
Confidence            7888888765432            24568888875

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=91.19  E-value=0.15  Score=32.54  Aligned_cols=31  Identities=23%  Similarity=0.302  Sum_probs=25.2

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhcc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAY  125 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  125 (144)
                      -|.|+.|+..|+....+.         .-|.|+.||....
T Consensus       109 ~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       109 FFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             eEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            399999999998888874         3699999997543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG1146|consensus

Probab=91.12  E-value=0.15  Score=42.37  Aligned_cols=104  Identities=13%  Similarity=0.101  Sum_probs=72.4

Q ss_pred             ceecCccCCccCCccccccccCCCCCCcccc--CCCCCeeCCCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeC
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPNMSFL--NSVIPQSCKHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFIC   89 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h--~~~~~~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C   89 (144)
                      ...|..|...|.....+..+-     -...+  .....+.|..|+ .|...  ..++    ....+           |.|
T Consensus      1228 gl~~~~~e~~f~~~~~~~~~a-----~~~~~~~~~sGe~~c~~~~~~~~~~~~~~~l----~~~~~-----------~~~ 1287 (1406)
T KOG1146|consen 1228 GLLPNALEQPFPQEPEPTATA-----PPKPPELPASGEGECGAVDELLTPSFGISTL----DVTHR-----------YLC 1287 (1406)
T ss_pred             cccHHhhhcCccCcccccccC-----CCCCCcCcCCCcchhhhccccccCccceeec----ccchh-----------HHH
Confidence            367888888888887776621     11111  122347899998 77666  3354    22334           899


Q ss_pred             CCCCcccCChhHHHHHHHhh-----------------cCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         90 VACDYFTIISQNMRNHTLIH-----------------LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        90 ~~C~~~f~~~~~l~~H~~~h-----------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      ..|...|.....|..|.+.-                 ..-..| |..|...|.....|..|+++-++
T Consensus      1288 ~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~~~ 1353 (1406)
T KOG1146|consen 1288 RQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSSAH 1353 (1406)
T ss_pred             HHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHhhh
Confidence            99999999999999887431                 112345 99999999999999999996443

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=90.69  E-value=0.55  Score=24.61  Aligned_cols=9  Identities=22%  Similarity=0.752  Sum_probs=5.7

Q ss_pred             CCeeCCCCC
Q psy10073         49 IPQSCKHCK   57 (144)
Q Consensus        49 ~~~~C~~C~   57 (144)
                      ..|.|+.||
T Consensus        24 ~~F~CPnCG   32 (59)
T PRK14890         24 VKFLCPNCG   32 (59)
T ss_pred             CEeeCCCCC
Confidence            346677776

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=90.57  E-value=0.18  Score=32.04  Aligned_cols=13  Identities=31%  Similarity=0.726  Sum_probs=11.0

Q ss_pred             CeeCCCCC-CCcch
Q psy10073         50 PQSCKHCK-NFTSS   62 (144)
Q Consensus        50 ~~~C~~C~-~f~~~   62 (144)
                      .++|+.|| +|.+.
T Consensus        28 ~~~c~~c~~~f~~~   41 (154)
T PRK00464         28 RRECLACGKRFTTF   41 (154)
T ss_pred             eeeccccCCcceEe
Confidence            38899999 99887

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=89.99  E-value=0.2  Score=32.67  Aligned_cols=31  Identities=23%  Similarity=0.453  Sum_probs=24.8

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhcc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAY  125 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  125 (144)
                      .|.|+.|+..|+....+.         .-|.|+.||....
T Consensus       117 ~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        117 FFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             EEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            399999999998887753         3699999996543

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=89.84  E-value=0.31  Score=22.29  Aligned_cols=11  Identities=27%  Similarity=0.407  Sum_probs=7.4

Q ss_pred             eecCccCCccC
Q psy10073         16 KTCLYCNKYVP   26 (144)
Q Consensus        16 ~~C~~C~~~f~   26 (144)
                      |.|..||..+.
T Consensus         1 Y~C~~Cg~~~~   11 (32)
T PF03604_consen    1 YICGECGAEVE   11 (32)
T ss_dssp             EBESSSSSSE-
T ss_pred             CCCCcCCCeeE
Confidence            56778887766

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>smart00531 TFIIE Transcription initiation factor IIE

Probab=89.09  E-value=0.31  Score=30.69  Aligned_cols=14  Identities=14%  Similarity=0.147  Sum_probs=8.9

Q ss_pred             ceecCccCCccCCc
Q psy10073         15 KKTCLYCNKYVPSD   28 (144)
Q Consensus        15 ~~~C~~C~~~f~~~   28 (144)
                      .|.|+.|+..|...
T Consensus        99 ~Y~Cp~C~~~y~~~  112 (147)
T smart00531       99 YYKCPNCQSKYTFL  112 (147)
T ss_pred             EEECcCCCCEeeHH
Confidence            46677776666643

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=89.08  E-value=0.26  Score=24.84  Aligned_cols=13  Identities=23%  Similarity=0.562  Sum_probs=11.0

Q ss_pred             CceecCccCCccC
Q psy10073         14 TKKTCLYCNKYVP   26 (144)
Q Consensus        14 ~~~~C~~C~~~f~   26 (144)
                      ..|.|..||+.|.
T Consensus         5 ~~Y~C~~Cg~~~~   17 (49)
T COG1996           5 MEYKCARCGREVE   17 (49)
T ss_pred             EEEEhhhcCCeee
Confidence            4699999999993

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.84  E-value=0.31  Score=29.09  Aligned_cols=30  Identities=13%  Similarity=0.178  Sum_probs=20.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccCh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQK  127 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  127 (144)
                      ..|+.||..|-..           +..|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            5788888777542           23577788888777654

The function of members of this family is unknown.

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=88.80  E-value=0.47  Score=20.14  Aligned_cols=7  Identities=43%  Similarity=1.208  Sum_probs=2.9

Q ss_pred             eeCCCCC
Q psy10073         87 FICVACD   93 (144)
Q Consensus        87 ~~C~~C~   93 (144)
                      |.|+.||
T Consensus        17 f~CPnCG   23 (24)
T PF07754_consen   17 FPCPNCG   23 (24)
T ss_pred             EeCCCCC
Confidence            4444443

It is likely to bind zinc via its four well-conserved cysteine residues.

>PHA00626 hypothetical protein

Probab=88.77  E-value=0.43  Score=24.68  Aligned_cols=14  Identities=21%  Similarity=0.328  Sum_probs=8.5

Q ss_pred             CCeeCCCCC-CCcch
Q psy10073         49 IPQSCKHCK-NFTSS   62 (144)
Q Consensus        49 ~~~~C~~C~-~f~~~   62 (144)
                      ..|.|+.|| .|...
T Consensus        22 nrYkCkdCGY~ft~~   36 (59)
T PHA00626         22 DDYVCCDCGYNDSKD   36 (59)
T ss_pred             cceEcCCCCCeechh
Confidence            357777777 66443

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=88.60  E-value=0.35  Score=23.85  Aligned_cols=13  Identities=15%  Similarity=0.181  Sum_probs=9.5

Q ss_pred             ceecCccCCccCC
Q psy10073         15 KKTCLYCNKYVPS   27 (144)
Q Consensus        15 ~~~C~~C~~~f~~   27 (144)
                      .|.|..||..|..
T Consensus         2 ~Y~C~~Cg~~~~~   14 (44)
T smart00659        2 IYICGECGRENEI   14 (44)
T ss_pred             EEECCCCCCEeec
Confidence            3788888887654

present in RNA polymerase I, II and III

>PF00301 Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubredoxin is a low molecular weight iron-containing bacterial protein involved in electron transfer [, ], sometimes replacing ferredoxin as an electron carrier []

Probab=88.36  E-value=0.51  Score=23.63  Aligned_cols=15  Identities=13%  Similarity=0.313  Sum_probs=9.6

Q ss_pred             eecCccCCccCCccc
Q psy10073         16 KTCLYCNKYVPSDID   30 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~   30 (144)
                      |.|..||..+.....
T Consensus         2 y~C~~CgyvYd~~~G   16 (47)
T PF00301_consen    2 YQCPVCGYVYDPEKG   16 (47)
T ss_dssp             EEETTTSBEEETTTB
T ss_pred             cCCCCCCEEEcCCcC
Confidence            667777766665443

The 3-D structures of a number of rubredoxins have been solved [, ]. The fold belongs to the alpha+beta class, with 2 alpha-helices and 2-3 beta-strands. Its active site contains an iron ion which is co-ordinated by the sulphurs of four conserved cysteine residues forming an almost regular tetrahedron. The conserved cysteines reside on two loops, which are the most conserved regions of the protein. In addition, a ring of acidic residues in the proximity of the [Fe(Cys)4] centre is also well-conserved []. ; GO: 0009055 electron carrier activity, 0046872 metal ion binding; PDB: 2RDV_C 1RDV_A 1S24_A 1T9O_B 1B2J_A 1SMW_A 2PVE_B 1BFY_A 1T9P_C 1C09_C ....

>KOG2893|consensus

Probab=88.03  E-value=0.14  Score=34.75  Aligned_cols=19  Identities=21%  Similarity=0.429  Sum_probs=10.7

Q ss_pred             eeCCCCCcccCChhHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNH  105 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H  105 (144)
                      |+|.+|.+.+-+--.|..|
T Consensus        35 fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   35 FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             ceeeeehhhhccCCCceee
Confidence            6676666554444444444

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=87.88  E-value=0.55  Score=22.92  Aligned_cols=22  Identities=27%  Similarity=0.416  Sum_probs=10.2

Q ss_pred             cceeCCCcchhccC----hHHHHHHH
Q psy10073        113 KQFKCCLCSYGAYQ----KEKLQFHV  134 (144)
Q Consensus       113 ~~~~C~~C~~~f~~----~~~l~~H~  134 (144)
                      ....|..|++.+..    .+.|.+|+
T Consensus        15 ~~a~C~~C~~~~~~~~~~ts~l~~HL   40 (45)
T PF02892_consen   15 KKAKCKYCGKVIKYSSGGTSNLKRHL   40 (45)
T ss_dssp             S-EEETTTTEE-----SSTHHHHHHH
T ss_pred             CeEEeCCCCeEEeeCCCcHHHHHHhh
Confidence            34556666655544    25666666

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]

Probab=87.79  E-value=0.34  Score=27.69  Aligned_cols=26  Identities=19%  Similarity=0.206  Sum_probs=16.4

Q ss_pred             hhhhhhhcCCCC----CceecCccCCccCC
Q psy10073          2 EHWEQCLLVPLS----TKKTCLYCNKYVPS   27 (144)
Q Consensus         2 ~~~~~~~~~~~~----~~~~C~~C~~~f~~   27 (144)
                      +|.+.-+..-+.    .|-.|..||..|..
T Consensus        41 ~hiak~lkr~g~~Llv~Pa~CkkCGfef~~   70 (97)
T COG3357          41 EHIAKSLKRKGKRLLVRPARCKKCGFEFRD   70 (97)
T ss_pred             HHHHHHHHhCCceEEecChhhcccCccccc
Confidence            445555544443    25678888888876

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.52  E-value=0.62  Score=29.37  Aligned_cols=36  Identities=17%  Similarity=0.362  Sum_probs=24.6

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhcc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAY  125 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  125 (144)
                      .|.|+.|+..|.....+..   ... ...|.|+.||....
T Consensus        99 ~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~l~  134 (147)
T smart00531       99 YYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEELE  134 (147)
T ss_pred             EEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCEEE
Confidence            3999999999986554432   011 33499999997653

>smart00614 ZnF_BED BED zinc finger

Probab=87.30  E-value=0.56  Score=23.65  Aligned_cols=20  Identities=25%  Similarity=0.549  Sum_probs=10.1

Q ss_pred             eCCCcchhccCh-----HHHHHHHH
Q psy10073        116 KCCLCSYGAYQK-----EKLQFHVK  135 (144)
Q Consensus       116 ~C~~C~~~f~~~-----~~l~~H~~  135 (144)
                      .|..|++.++..     +.|.+|++
T Consensus        20 ~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       20 KCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EecCCCCEeeeCCCCCcHHHHHHHH
Confidence            455555544332     45666655

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=87.17  E-value=0.66  Score=20.03  Aligned_cols=19  Identities=16%  Similarity=0.469  Sum_probs=11.3

Q ss_pred             eCCCcchhccChHHHHHHHH
Q psy10073        116 KCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~  135 (144)
                      .|++|++.+ ....++.|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            466666665 4455666654

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>COG4888 Uncharacterized Zn ribbon-containing protein [General function prediction only]

Probab=86.97  E-value=0.46  Score=27.71  Aligned_cols=40  Identities=23%  Similarity=0.352  Sum_probs=24.4

Q ss_pred             CCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch
Q psy10073         12 LSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS   62 (144)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~   62 (144)
                      ..+.|.|+.||..-...-.++.           -.......|..|| .|...
T Consensus        19 L~k~FtCp~Cghe~vs~ctvkk-----------~~~~g~~~Cg~CGls~e~e   59 (104)
T COG4888          19 LPKTFTCPRCGHEKVSSCTVKK-----------TVNIGTAVCGNCGLSFECE   59 (104)
T ss_pred             CCceEecCccCCeeeeEEEEEe-----------cCceeEEEcccCcceEEEe
Confidence            5567888888876665544444           1222345688888 66543

>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center

Probab=86.76  E-value=0.72  Score=23.41  Aligned_cols=13  Identities=15%  Similarity=0.355  Sum_probs=8.5

Q ss_pred             eecCccCCccCCc
Q psy10073         16 KTCLYCNKYVPSD   28 (144)
Q Consensus        16 ~~C~~C~~~f~~~   28 (144)
                      |.|..||..+.-.
T Consensus         2 y~C~~CgyiYd~~   14 (50)
T cd00730           2 YECRICGYIYDPA   14 (50)
T ss_pred             cCCCCCCeEECCC
Confidence            5677777666643

Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.65  E-value=0.51  Score=30.37  Aligned_cols=24  Identities=25%  Similarity=0.631  Sum_probs=15.8

Q ss_pred             CeeCCCCCCCcchhhhhhhcccCCCCcccccCCCCCceeCCCCCc
Q psy10073         50 PQSCKHCKNFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDY   94 (144)
Q Consensus        50 ~~~C~~C~~f~~~~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~   94 (144)
                      -|.|++||          -++.++.|           -.||+||-
T Consensus       134 ~~vC~vCG----------y~~~ge~P-----------~~CPiCga  157 (166)
T COG1592         134 VWVCPVCG----------YTHEGEAP-----------EVCPICGA  157 (166)
T ss_pred             EEEcCCCC----------CcccCCCC-----------CcCCCCCC
Confidence            57777777          33445666           77777773

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.58  E-value=0.55  Score=30.25  Aligned_cols=23  Identities=26%  Similarity=0.791  Sum_probs=18.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      |.|++||..+             .|+.|-+|++||-
T Consensus       135 ~vC~vCGy~~-------------~ge~P~~CPiCga  157 (166)
T COG1592         135 WVCPVCGYTH-------------EGEAPEVCPICGA  157 (166)
T ss_pred             EEcCCCCCcc-------------cCCCCCcCCCCCC
Confidence            9999999753             4578899999983

>PRK14873 primosome assembly protein PriA; Provisional

Probab=86.45  E-value=0.69  Score=36.51  Aligned_cols=8  Identities=25%  Similarity=0.397  Sum_probs=4.2

Q ss_pred             eeCCCCCc
Q psy10073         87 FICVACDY   94 (144)
Q Consensus        87 ~~C~~C~~   94 (144)
                      ..|..||.
T Consensus       411 l~Ch~CG~  418 (665)
T PRK14873        411 PRCRWCGR  418 (665)
T ss_pred             eECCCCcC
Confidence            55555553

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=85.87  E-value=0.77  Score=27.29  Aligned_cols=25  Identities=24%  Similarity=0.647  Sum_probs=18.6

Q ss_pred             eeC----CCcchhccChHHHHHHHHhhcC
Q psy10073        115 FKC----CLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       115 ~~C----~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      |.|    ..|+..+.+...+.+|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            677    7777777777777777776654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=85.69  E-value=0.74  Score=22.75  Aligned_cols=30  Identities=20%  Similarity=0.358  Sum_probs=19.6

Q ss_pred             CceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCc
Q psy10073         14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFT   60 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~   60 (144)
                      ..|.|+.||..|.....                 .....|+.|| .+.
T Consensus         2 ~~y~C~~CG~~~~~~~~-----------------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          2 AEYKCARCGREVELDEY-----------------GTGVRCPYCGYRIL   32 (46)
T ss_pred             CEEECCCCCCEEEECCC-----------------CCceECCCCCCeEE
Confidence            35889999987754321                 1157888888 554

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.29  E-value=0.45  Score=30.43  Aligned_cols=14  Identities=7%  Similarity=-0.140  Sum_probs=6.9

Q ss_pred             ceecCccCCccCCc
Q psy10073         15 KKTCLYCNKYVPSD   28 (144)
Q Consensus        15 ~~~C~~C~~~f~~~   28 (144)
                      -|.|+.|+..|+..
T Consensus       109 ~Y~Cp~c~~r~tf~  122 (158)
T TIGR00373       109 FFICPNMCVRFTFN  122 (158)
T ss_pred             eEECCCCCcEeeHH
Confidence            35555555544443

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2785|consensus

Probab=85.09  E-value=0.99  Score=32.80  Aligned_cols=52  Identities=19%  Similarity=0.340  Sum_probs=44.2

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcC-----------------------CcceeCCCcc---hhccChHHHHHHHHh
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLG-----------------------DKQFKCCLCS---YGAYQKEKLQFHVKN  136 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~  136 (144)
                      .|-.|..|++.+.+...-..||..++|                       ..-|.|-.|+   +.|.+....+.||..
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            457899999999999999999988765                       2347899998   999999999999874

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=85.04  E-value=0.54  Score=29.11  Aligned_cols=22  Identities=18%  Similarity=0.374  Sum_probs=9.4

Q ss_pred             eeCCCcchhccChHHHHHHHHhhcC
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      ..|-+||+.|...   .+|++.|+|
T Consensus        73 i~clecGk~~k~L---krHL~~~~g   94 (132)
T PF05443_consen   73 IICLECGKKFKTL---KRHLRTHHG   94 (132)
T ss_dssp             EE-TBT--EESBH---HHHHHHTT-
T ss_pred             eEEccCCcccchH---HHHHHHccC
Confidence            4555555555432   555555544

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=84.97  E-value=0.39  Score=31.36  Aligned_cols=14  Identities=21%  Similarity=0.237  Sum_probs=7.3

Q ss_pred             ceecCccCCccCCc
Q psy10073         15 KKTCLYCNKYVPSD   28 (144)
Q Consensus        15 ~~~C~~C~~~f~~~   28 (144)
                      -|.|+.|+..|+..
T Consensus       117 ~Y~Cp~C~~rytf~  130 (178)
T PRK06266        117 FFFCPNCHIRFTFD  130 (178)
T ss_pred             EEECCCCCcEEeHH
Confidence            35555555555443

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=83.98  E-value=0.9  Score=36.19  Aligned_cols=11  Identities=18%  Similarity=0.307  Sum_probs=6.1

Q ss_pred             CcceeCCCcch
Q psy10073        112 DKQFKCCLCSY  122 (144)
Q Consensus       112 ~~~~~C~~C~~  122 (144)
                      ..|..|+.||.
T Consensus       473 ~~p~~Cp~Cgs  483 (730)
T COG1198         473 PIPQSCPECGS  483 (730)
T ss_pred             CCCCCCCCCCC
Confidence            34556666653

>PF14353 CpXC: CpXC protein

Probab=83.85  E-value=0.27  Score=30.13  Aligned_cols=14  Identities=21%  Similarity=0.472  Sum_probs=9.7

Q ss_pred             eecCccCCccCCcc
Q psy10073         16 KTCLYCNKYVPSDI   29 (144)
Q Consensus        16 ~~C~~C~~~f~~~~   29 (144)
                      ..|+.|+..|....
T Consensus         2 itCP~C~~~~~~~v   15 (128)
T PF14353_consen    2 ITCPHCGHEFEFEV   15 (128)
T ss_pred             cCCCCCCCeeEEEE
Confidence            36888888776543

>KOG2231|consensus

Probab=83.43  E-value=1.1  Score=35.11  Aligned_cols=48  Identities=17%  Similarity=0.281  Sum_probs=32.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc------chhccChHHHHHHHHhhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC------SYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~  138 (144)
                      -.|..|...|.....|.+|++.++    |.|..|      +..|.....|..|-+..|
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            578888888888888888877544    233333      455666777777766554

>COG1773 Rubredoxin [Energy production and conversion]

Probab=83.02  E-value=2  Score=22.29  Aligned_cols=15  Identities=13%  Similarity=0.339  Sum_probs=8.8

Q ss_pred             ceecCccCCccCCcc
Q psy10073         15 KKTCLYCNKYVPSDI   29 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~   29 (144)
                      .|+|..||..|.-..
T Consensus         3 ~~~C~~CG~vYd~e~   17 (55)
T COG1773           3 RWRCSVCGYVYDPEK   17 (55)
T ss_pred             ceEecCCceEecccc
Confidence            466666666665433

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=82.89  E-value=0.73  Score=25.33  Aligned_cols=16  Identities=19%  Similarity=0.550  Sum_probs=10.5

Q ss_pred             CCCCeeCC--CCC-CCcch
Q psy10073         47 SVIPQSCK--HCK-NFTSS   62 (144)
Q Consensus        47 ~~~~~~C~--~C~-~f~~~   62 (144)
                      .+.-+.|.  .|| +|...
T Consensus        24 ~~~Y~qC~N~eCg~tF~t~   42 (72)
T PRK09678         24 KERYHQCQNVNCSATFITY   42 (72)
T ss_pred             heeeeecCCCCCCCEEEEE
Confidence            34556776  777 77666

>KOG4173|consensus

Probab=81.80  E-value=0.6  Score=31.00  Aligned_cols=50  Identities=16%  Similarity=0.231  Sum_probs=40.6

Q ss_pred             eeCCCCCcccCChhHHHHHHHhh----------cCCcceeC--CCcchhccChHHHHHHHHh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIH----------LGDKQFKC--CLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~~~C--~~C~~~f~~~~~l~~H~~~  136 (144)
                      -.|..|.+.|.+...|..|+.-.          -|...|+|  +.|+..|.+......|+-.
T Consensus       107 ~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  107 NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            48999999999999999998532          34456899  5699999999999999654

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=81.33  E-value=0.64  Score=31.28  Aligned_cols=28  Identities=18%  Similarity=0.246  Sum_probs=20.6

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ++..|.|+.|+|.|....-.+.|+..-+
T Consensus        74 ~~~K~~C~lc~KlFkg~eFV~KHI~nKH  101 (214)
T PF04959_consen   74 DEDKWRCPLCGKLFKGPEFVRKHIFNKH  101 (214)
T ss_dssp             SSEEEEE-SSS-EESSHHHHHHHHHHH-
T ss_pred             cCCEECCCCCCcccCChHHHHHHHhhcC
Confidence            4445999999999999999999987643

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=81.00  E-value=0.58  Score=25.22  Aligned_cols=27  Identities=26%  Similarity=0.538  Sum_probs=12.0

Q ss_pred             CCceecCccCCccCCccccccccCCCCCC
Q psy10073         13 STKKTCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      ...-.|..|++.|..  -..+|+|..||.
T Consensus         7 ~~~~~C~~C~~~F~~--~~rrhhCr~CG~   33 (69)
T PF01363_consen    7 SEASNCMICGKKFSL--FRRRHHCRNCGR   33 (69)
T ss_dssp             GG-SB-TTT--B-BS--SS-EEE-TTT--
T ss_pred             CCCCcCcCcCCcCCC--ceeeEccCCCCC
Confidence            345679999999953  355677777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=80.24  E-value=2.1  Score=34.21  Aligned_cols=12  Identities=17%  Similarity=0.332  Sum_probs=6.6

Q ss_pred             eecCccCCccCC
Q psy10073         16 KTCLYCNKYVPS   27 (144)
Q Consensus        16 ~~C~~C~~~f~~   27 (144)
                      ..|..||..+..
T Consensus       436 l~C~~Cg~v~~C  447 (730)
T COG1198         436 LLCRDCGYIAEC  447 (730)
T ss_pred             eecccCCCcccC
Confidence            346666665543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	144
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-04

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 87  FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH 138
             C  C Y       +R H  IH  D+ FKC  CS+   Q   L  H+K K 
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KF 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.95
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.95
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.95
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.95
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.9
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.9
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.89
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.88
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.88
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.88
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.81
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.8
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.79
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.75
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.75
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.75
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.74
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.73
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.72
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.72
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.71
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.71
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.63
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.62
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.58
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.57
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.56
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.5
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.5
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.48
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.48
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.47
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.47
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.47
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.47
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.46
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.46
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.45
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.44
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.43
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.41
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.4
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.4
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.4
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.4
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.39
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.39
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.39
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.39
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.38
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.38
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.37
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.36
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.35
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.34
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.34
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.32
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.32
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.31
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.31
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.29
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.28
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.27
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.27
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.26
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.26
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.26
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.25
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.25
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.24
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.23
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.23
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.22
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.19
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.18
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.18
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.17
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.17
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.15
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.14
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.12
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.12
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.09
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.09
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.08
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.08
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.03
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.99
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.98
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.97
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.97
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.96
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.94
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.92
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.92
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.88
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.86
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.86
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.84
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.84
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.84
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.82
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.81
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.79
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.79
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.78
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.27
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.26
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.76
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.74
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.72
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.7
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.69
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.67
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.66
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.66
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.65
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.62
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.62
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.6
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.02
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.59
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.56
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.56
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.56
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.55
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.54
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.53
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.52
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.9
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.49
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.49
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.44
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.67
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.24
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.22
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.59
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.34
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.32
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.96
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.95
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.95
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.57
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.75
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	95.04
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.78
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.43
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	94.35
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	94.17
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.48
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	92.66
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.58
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.54
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	91.34
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.16
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.06
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	90.27
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	90.11
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	89.85
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	89.26
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	88.97
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	88.38
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	88.35
1yk4_A	52	Rubredoxin, RD; electron transport; 0.69A {Pyrococ	87.9
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.85
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	87.71
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.24
2v3b_B	55	Rubredoxin 2, rubredoxin; alkane degradation, iron	86.74
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	86.49
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	86.0
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	85.88
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	85.36
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	85.07
1dx8_A	70	Rubredoxin; electron transport, zinc-substitution;	84.94
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.48
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.42
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	84.13
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.69
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.46
1s24_A	87	Rubredoxin 2; electron transport; NMR {Pseudomonas	83.23
3a43_A	139	HYPD, hydrogenase nickel incorporation protein HYP	82.72
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	82.28
1wil_A	89	KIAA1045 protein; ring finger domain, structural g	82.26
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	80.45

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=7.6e-32  Score=175.55  Aligned_cols=121  Identities=20%  Similarity=0.394  Sum_probs=83.5

Q ss_pred             ceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCccc------------
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMV------------   78 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~------------   78 (144)
                      +|.|+.|++.|.+..+|..       |+++|.++++|.|+.|+ .|.+.   ..|+ ++|.++++|.|            
T Consensus        49 ~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~  120 (190)
T 2i13_A           49 PYKCPECGKSFSDKKDLTR-------HQRTHTGEKPYKCPECGKSFSQRANLRAHQ-RTHTGEKPYACPECGKSFSQLAH  120 (190)
T ss_dssp             CEECTTTCCEESSHHHHHH-------HHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHTCCCEECTTTCCEESSHHH
T ss_pred             CccCCCcCchhCCHHHHHH-------HHHhcCCCCCccCcccCCccCCHHHHHHHH-HhcCCCCCCcCCCCCCccCCHHH
Confidence            4555555555555555555       45566666666666666 66655   6666 66666666655            


Q ss_pred             -----ccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073         79 -----RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        79 -----~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                           ++|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+|++||
T Consensus       121 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence                 44566777888888888888888888888888888888888888888888888888888888886

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=1e-30  Score=170.25  Aligned_cols=126  Identities=19%  Similarity=0.348  Sum_probs=100.5

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCccc--------
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMV--------   78 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~--------   78 (144)
                      ++.++|.|+.|++.|.+..+|..       |+++|.++++|.|+.|+ .|.+.   ..|+ .+|.++++|.|        
T Consensus        17 ~~~~~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~   88 (190)
T 2i13_A           17 PGEKPYACPECGKSFSRSDHLAE-------HQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFS   88 (190)
T ss_dssp             --------------CCSSHHHHH-------GGGCC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEES
T ss_pred             CCCCCCcCCCCccccCCHHHHHH-------HHHHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccC
Confidence            45678999999999999999999       89999999999999999 99888   8999 99999999887        


Q ss_pred             ---------ccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073         79 ---------RPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        79 ---------~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                               +.+.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus        89 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  163 (190)
T 2i13_A           89 QRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK  163 (190)
T ss_dssp             CHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             CHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeE
Confidence                     456778889999999999999999999999999999999999999999999999999999999873

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.95  E-value=3.6e-29  Score=152.54  Aligned_cols=112  Identities=22%  Similarity=0.406  Sum_probs=98.9

Q ss_pred             CCceecC--ccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCc
Q psy10073         13 STKKTCL--YCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYK   86 (144)
Q Consensus        13 ~~~~~C~--~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~   86 (144)
                      .++|.|+  .|++.|.+..+|..       |+++| ++++|.|++|+ .|.+.   ..|+ ++|.++++           
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~-------H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------   62 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRK-------HLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKP-----------   62 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHH-------HHGGG-SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCC-----------
T ss_pred             CCcccCCCCCCcCccCCHHHHHH-------HHHHc-CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCC-----------
Confidence            4679999  89999999999999       78888 88999999999 99888   8999 99999999           


Q ss_pred             eeCCC--CCcccCChhHHHHHHHhhcCCcceeCC--CcchhccChHHHHHHHHhhcCCCCCC
Q psy10073         87 FICVA--CDYFTIISQNMRNHTLIHLGDKQFKCC--LCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        87 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |.|+.  |++.|.....|..|+++|.++++|.|+  .|++.|.+.+.|..|+++|++++|++
T Consensus        63 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             eeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            99986  999999999999999999999999995  59999999999999999999999975

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.4e-28  Score=149.71  Aligned_cols=112  Identities=21%  Similarity=0.317  Sum_probs=102.3

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhc---ccCCCCcccccCCC
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLME---HSENCPCMVRPDPV   83 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~---h~~~~~~~~~~~~~   83 (144)
                      .+.++|.|++|++.|.+...|..       |+++|.++++|.|+.|+ .|.+.   ..|+ ..   +.++++        
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~~~~~~~~~~--------   66 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKV-------HNRKHTGEKPFECPKCGKCYFRKENLLEHE-ARNCMNRSEQV--------   66 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHH-------HHHHHSSCCSCBCTTTCCBCSSHHHHHHHH-HHCCCCSCCCC--------
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHH-------HHHhCCCCCCeECCCCCchhcCHHHHHHHH-hhhhcCCCCCC--------
Confidence            45678999999999999999999       89999999999999999 99888   8888 64   566777        


Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHH-hhcCCC
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK-NKHSTK  141 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k  141 (144)
                         |.|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|++ .|.++.
T Consensus        67 ---~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           67 ---FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             ---EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             ---eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence               9999999999999999999999999999999999999999999999997 566654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.95  E-value=2.3e-28  Score=154.34  Aligned_cols=115  Identities=18%  Similarity=0.320  Sum_probs=105.7

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccc-cCCCCC--------eeCCCCC-CCcch---hhhhhhcccCCCCcc
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSF-LNSVIP--------QSCKHCK-NFTSS---DVNLLMEHSENCPCM   77 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~-h~~~~~--------~~C~~C~-~f~~~---~~H~~~~h~~~~~~~   77 (144)
                      .....|.|..|++.|.+..+|..       |+++ |.+..+        |.|++|+ .|.+.   ..|+ ++|.++++  
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~-------H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~--   90 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVT-------HVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKP--   90 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHH-------HHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHT-HHHHCCCS--
T ss_pred             hhhcccccccCCcccCCHHHHHH-------HHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHH-HhcCCCCc--
Confidence            34557999999999999999999       6776 776654        8999999 99888   8899 99999999  


Q ss_pred             cccCCCCCceeCCC--CCcccCChhHHHHHHHhhcCCcceeCCC--cchhccChHHHHHHHHhhcCCCCCC
Q psy10073         78 VRPDPVKYKFICVA--CDYFTIISQNMRNHTLIHLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        78 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                               |.|.+  |++.|.....|..|+++|+++++|.|++  |++.|.+.+.|..|+++|++++||+
T Consensus        91 ---------~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A           91 ---------FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             ---------EECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             ---------ccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence                     99998  9999999999999999999999999997  9999999999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.95  E-value=4e-28  Score=146.84  Aligned_cols=107  Identities=24%  Similarity=0.416  Sum_probs=101.6

Q ss_pred             CCCceecCc--cCCccCCccccccccCCCCCCccccCCCCCeeCC--CCC-CCcch---hhhhhhcccCCCCcccccCCC
Q psy10073         12 LSTKKTCLY--CNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMVRPDPV   83 (144)
Q Consensus        12 ~~~~~~C~~--C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~   83 (144)
                      +.++|.|++  |++.|.+..+|..       |+++|.++++|.|+  .|+ .|...   ..|+ ++|.++++        
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~--------   66 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQM-------HSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKP--------   66 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHH-------HHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCC--------
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHH-------HHHhhCCCCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCC--------
Confidence            567899997  9999999999999       88999999999999  799 99888   8999 89999999        


Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcCCcceeC--CCcchhccChHHHHHHHHhh
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC--CLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  137 (144)
                         |.|++|++.|.+...|..|+++|+++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        67 ---~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           67 ---FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ---EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ---ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence               9999999999999999999999999999999  89999999999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=2.3e-27  Score=146.21  Aligned_cols=95  Identities=15%  Similarity=0.231  Sum_probs=57.2

Q ss_pred             CCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCce
Q psy10073         12 LSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKF   87 (144)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~   87 (144)
                      +.++|.|++||+.|.+..+|..       |+++|.+++||.|++|+ .|...   ..|+ ++|++++|           |
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~-------H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~-----------~   79 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRR-------HFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERR-----------Y   79 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHH-------HHHHHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCC-----------E
T ss_pred             CCcCeECCCCCCCcCCHHHHHH-------HHHHcCCCCCeeCCccCeecccccchhhhc-cccCCCcc-----------c
Confidence            3445666666666666666666       55666666666666666 66555   5566 56666666           6


Q ss_pred             eCCCCCcccCChhHHHHHHHhhcCCc------ceeCCCcchhcc
Q psy10073         88 ICVACDYFTIISQNMRNHTLIHLGDK------QFKCCLCSYGAY  125 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~~~h~~~~------~~~C~~C~~~f~  125 (144)
                      .|++|++.|.+...|..|+++|++++      +|+|.+|++.|.
T Consensus        80 ~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           80 QCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             EESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             cCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            66666666666666666666655432      355666665554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.93  E-value=2.8e-26  Score=149.18  Aligned_cols=122  Identities=16%  Similarity=0.269  Sum_probs=98.8

Q ss_pred             CCCCCceec--CccCCccCCccccccccCCCCCCccccCCCCCeeC--CCCC-CCcch---hhhhhhcccCCCCccc---
Q psy10073         10 VPLSTKKTC--LYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSC--KHCK-NFTSS---DVNLLMEHSENCPCMV---   78 (144)
Q Consensus        10 ~~~~~~~~C--~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C--~~C~-~f~~~---~~H~~~~h~~~~~~~~---   78 (144)
                      +...++|.|  +.|++.|.+..+|..       |+++|.++++|.|  +.|+ .|.+.   ..|+ ++|.++++|.|   
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~   78 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQA-------HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSD   78 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHH-------HHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSS
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHH-------HHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCC
Confidence            344667999  689999999999999       7888888889999  7899 88887   8888 88888888665   


Q ss_pred             -----------------ccC-CCCCceeC--CCCCcccCChhHHHHHHHhhcCCcceeCCC--cchhccChHHHHHHHHh
Q psy10073         79 -----------------RPD-PVKYKFIC--VACDYFTIISQNMRNHTLIHLGDKQFKCCL--CSYGAYQKEKLQFHVKN  136 (144)
Q Consensus        79 -----------------~~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  136 (144)
                                       +.| .+.++|.|  +.|++.|.+...|..|+++|++++||.|+.  |++.|.+.+.|..|+++
T Consensus        79 ~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A           79 GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV  158 (190)
T ss_dssp             SCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred             CCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH
Confidence                             234 35667888  788888888888888888888888888877  88888888888888888


Q ss_pred             hcC
Q psy10073        137 KHS  139 (144)
Q Consensus       137 h~~  139 (144)
                      |++
T Consensus       159 H~~  161 (190)
T 1tf6_A          159 HAG  161 (190)
T ss_dssp             SCS
T ss_pred             hCC
Confidence            876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=5.5e-26  Score=143.28  Aligned_cols=110  Identities=19%  Similarity=0.401  Sum_probs=92.4

Q ss_pred             CCCCceecCc-----cCCccCCccccccccCCCCCCccccCCCCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccc
Q psy10073         11 PLSTKKTCLY-----CNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVR   79 (144)
Q Consensus        11 ~~~~~~~C~~-----C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~   79 (144)
                      .+.++|.|+.     |++.|.+...|..       |+++|.++++|.|++  |+ .|.+.   ..|+ ++|.++++    
T Consensus        30 ~~~~~~~C~~c~C~~c~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~----   97 (155)
T 2gli_A           30 GERKEFVCHWGGCSRELRPFKAQYMLVV-------HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKP----   97 (155)
T ss_dssp             SCSSCCCCCBTTCTTTTCCCSSHHHHHH-------HTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHH-HHTTTCCC----
T ss_pred             CCCcceeCCCCCccchhhhhhhHHHHHH-------HHHhcCCCCCccCCCCCCCCcccCHHHHHHHH-HHcCCCCC----
Confidence            3455677664     3488888888888       788888888888875  88 88877   7888 88888888    


Q ss_pred             cCCCCCceeCCC--CCcccCChhHHHHHH-HhhcCCcceeCCC--cchhccChHHHHHHHHhhcC
Q psy10073         80 PDPVKYKFICVA--CDYFTIISQNMRNHT-LIHLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        80 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  139 (144)
                             |.|++  |++.|.+...|..|+ ++|.++++|.|++  |++.|.+.+.|..|+++|+|
T Consensus        98 -------~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           98 -------YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             -------EECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             -------eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                   99998  999999999999998 7899999999988  99999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=7e-27  Score=144.08  Aligned_cols=91  Identities=18%  Similarity=0.372  Sum_probs=87.0

Q ss_pred             CccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCccee
Q psy10073         41 NMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK  116 (144)
Q Consensus        41 h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  116 (144)
                      +..+|.|+++|.|++|| .|...   ..|+ ++|.+++|           |.|++|++.|.+...|..|+++|++++||.
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   80 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSWEKK-----------YPCRYCEKVFPLAEYRTKHEIHHTGERRYQ   80 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHH-HHHHCCSC-----------EECSSSSCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCCCCC-----------eeCCccCeecccccchhhhccccCCCcccc
Confidence            57789999999999999 99988   8999 99999999           999999999999999999999999999999


Q ss_pred             CCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        117 CCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       117 C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      |++|++.|.+.+.|..|+++|++++|+
T Consensus        81 C~~C~k~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           81 CLACGKSFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             ESSSCCEESSHHHHHHHHHHHTCCCTT
T ss_pred             CCCCCCCcCCHHHHHHHhHHhcCCCCC
Confidence            999999999999999999999998775

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.92  E-value=2.4e-25  Score=144.80  Aligned_cols=118  Identities=19%  Similarity=0.303  Sum_probs=86.7

Q ss_pred             CCceec--CccCCccCCccccccccCCCCCCccccCCCCCeeCC--CCC-CCcch---hhhhhhcc-cCCCCccc-----
Q psy10073         13 STKKTC--LYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCK--HCK-NFTSS---DVNLLMEH-SENCPCMV-----   78 (144)
Q Consensus        13 ~~~~~C--~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~--~C~-~f~~~---~~H~~~~h-~~~~~~~~-----   78 (144)
                      .++|.|  +.|++.|.+..+|..       |+++|.++++|.|+  .|+ .|.+.   ..|+...| .++++|.|     
T Consensus        40 ~~~~~C~~~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C  112 (190)
T 1tf6_A           40 EKPFPCKEEGCEKGFTSLHHLTR-------HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC  112 (190)
T ss_dssp             CCSSCCSSTTCCCCCSSHHHHHH-------HHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSS
T ss_pred             CCCccCCCCCCChhhCCHHHHHH-------HHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCC
Confidence            456777  667777777777777       55666666666666  566 66555   55553334 23444433     


Q ss_pred             --------------ccCCCCCceeCCC--CCcccCChhHHHHHHHhhcCCcceeCCC---cchhccChHHHHHHHHhhcC
Q psy10073         79 --------------RPDPVKYKFICVA--CDYFTIISQNMRNHTLIHLGDKQFKCCL---CSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        79 --------------~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~~  139 (144)
                                    ++|.++++|.|++  |++.|.+...|..|+++|++   |.|..   |++.|.+...|..|+++|++
T Consensus       113 ~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          113 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             ccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence                          4455666699988  99999999999999999997   89999   99999999999999999987


Q ss_pred             C
Q psy10073        140 T  140 (144)
Q Consensus       140 ~  140 (144)
                      +
T Consensus       190 e  190 (190)
T 1tf6_A          190 D  190 (190)
T ss_dssp             -
T ss_pred             C
Confidence            5

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.9e-25  Score=140.80  Aligned_cols=112  Identities=18%  Similarity=0.243  Sum_probs=101.8

Q ss_pred             CceecCccCCccCCccccccccCCCCCCcc---ccCCCCCeeCCC-----CC-CCcch---hhhhhhcccCCCCcccccC
Q psy10073         14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMS---FLNSVIPQSCKH-----CK-NFTSS---DVNLLMEHSENCPCMVRPD   81 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~---~h~~~~~~~C~~-----C~-~f~~~---~~H~~~~h~~~~~~~~~~~   81 (144)
                      .+|.|+.|++.|.+..+|..       |++   +|.++++|.|+.     |+ .|.+.   ..|+ ++|.++++      
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~-------H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~-~~h~~~~~------   67 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVH-------HINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEKP------   67 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHH-------HHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT-HHHHCCCC------
T ss_pred             CcCCcCCCccccCCHHHHHH-------HHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHH-HhcCCCCC------
Confidence            46899999999999999999       676   788899998864     46 67777   8899 99999999      


Q ss_pred             CCCCceeCCC--CCcccCChhHHHHHHHhhcCCcceeCCC--cchhccChHHHHHHH-HhhcCCCCCC
Q psy10073         82 PVKYKFICVA--CDYFTIISQNMRNHTLIHLGDKQFKCCL--CSYGAYQKEKLQFHV-KNKHSTKVKD  144 (144)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~kp~~  144 (144)
                           |.|++  |++.|.+...|..|+++|.++++|.|++  |++.|.+.+.|..|+ ++|.+++||.
T Consensus        68 -----~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~  130 (155)
T 2gli_A           68 -----HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYV  130 (155)
T ss_dssp             -----CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEE
T ss_pred             -----ccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCee
Confidence                 99985  9999999999999999999999999998  999999999999998 8999999873

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.90  E-value=1.5e-23  Score=124.28  Aligned_cols=88  Identities=27%  Similarity=0.471  Sum_probs=81.9

Q ss_pred             cCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         45 LNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        45 h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      ..++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   79 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERP-----------YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC   79 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCC-----------CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHH-HHcCCCCC-----------cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCc
Confidence            4567889999999 99888   8899 89999888           9999999999999999999999999999999999


Q ss_pred             chhccChHHHHHHHHhhcCCCCCC
Q psy10073        121 SYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       121 ~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++.|.+...|..|+++|++++||.
T Consensus        80 ~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           80 GKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             CCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CCcccCHHHHHHHHHHhCCCCCCc
Confidence            999999999999999999999984

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.5e-23  Score=121.23  Aligned_cols=87  Identities=25%  Similarity=0.580  Sum_probs=80.6

Q ss_pred             cCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         45 LNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        45 h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +.++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|.++++|.|++|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   70 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKP-----------YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC   70 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCS-----------EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSS
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCC-----------EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence            4678899999999 99888   8899 89998888           9999999999999999999999999999999999


Q ss_pred             chhccChHHHHHHHHhhcCCCCC
Q psy10073        121 SYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       121 ~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ++.|.+...|..|+++|+++++.
T Consensus        71 ~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           71 PYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             SCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999998753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.89  E-value=2.3e-23  Score=119.95  Aligned_cols=84  Identities=25%  Similarity=0.445  Sum_probs=75.2

Q ss_pred             CCCCeeCC--CCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         47 SVIPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        47 ~~~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      ++++|.|+  .|+ .|...   ..|+ ++|.++++           |.|+.|++.|.+...|..|+++|.++++|.|++|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKP-----------FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCC-----------EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHH-HHhCCCCC-----------ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            46789998  599 99888   8899 89999999           9999999999999999999999999999999999


Q ss_pred             chhccChHHHHHHHHhhcCCCC
Q psy10073        121 SYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       121 ~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      ++.|.+.+.|..|+++|+++++
T Consensus        69 ~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           69 GRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             CCEESSHHHHHHHHGGGGC---
T ss_pred             CchhCCHHHHHHHHHHhcccCC
Confidence            9999999999999999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.88  E-value=1.1e-23  Score=126.64  Aligned_cols=97  Identities=14%  Similarity=0.123  Sum_probs=86.3

Q ss_pred             CccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhc--ccCCCCcccccCCCCCceeCCCCCccc--CC
Q psy10073         27 SDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLME--HSENCPCMVRPDPVKYKFICVACDYFT--II   98 (144)
Q Consensus        27 ~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~--h~~~~~~~~~~~~~~~~~~C~~C~~~f--~~   98 (144)
                      +..+|..       |+++|.++++|.|++|+ .|...   ..|+ ++  |.+.+++          +.|++|++.|  ..
T Consensus         3 s~~~l~~-------H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~----------~~C~~C~~~f~f~~   64 (115)
T 2dmi_A            3 SGSSGKL-------YGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNH----------ETDNNNPKRWSKPR   64 (115)
T ss_dssp             CCCCCCC-------CCCCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCC----------CCCCCCCSCCSSCC
T ss_pred             cchhhhh-------heeeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCC----------ccCCCCCccccccc
Confidence            4567888       89999999999999999 99988   8899 77  6666652          4599999999  89


Q ss_pred             hhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073         99 SQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus        99 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      ...|..|+++|++++||.|++|++.|.+.+.|..|+++|+...
T Consensus        65 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999987654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.88  E-value=4.6e-23  Score=109.82  Aligned_cols=58  Identities=19%  Similarity=0.329  Sum_probs=54.8

Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      ++||.|.+|++.|...+.|..|+++|++++||.|++||++|.+.+.|.+|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            3459999999999999999999999999999999999999999999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=5.6e-23  Score=122.10  Aligned_cols=89  Identities=12%  Similarity=0.156  Sum_probs=82.1

Q ss_pred             CccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCccee
Q psy10073         41 NMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK  116 (144)
Q Consensus        41 h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  116 (144)
                      ++++|.++++|.|++|+ .|...   ..|+ ++|.  ++           |.|++|++.|.....|..|+. |.++++|.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~--~~-----------~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~   71 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHE-RLCR--NA-----------AVCPYCSLRFFSPELKQEHES-KCEYKKLT   71 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHH-HHHH--HS-----------BCCTTTCCCBSSHHHHHHHHH-HCSTGGGE
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHH-HHCC--CC-----------ccCCCCCCccCCHHHHHHHHH-cCCCCCcc
Confidence            57788999999999999 99888   8899 8883  57           999999999999999999996 99999999


Q ss_pred             CCCcchhccChHHHHHHHH-hhcCCCCCC
Q psy10073        117 CCLCSYGAYQKEKLQFHVK-NKHSTKVKD  144 (144)
Q Consensus       117 C~~C~~~f~~~~~l~~H~~-~h~~~kp~~  144 (144)
                      |++|++.|.+...|..|++ +|.+++||.
T Consensus        72 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           72 CLECMRTFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             EGGGTEECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             CccccchhCCHHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999997 999999984

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.87  E-value=1.5e-22  Score=114.59  Aligned_cols=78  Identities=31%  Similarity=0.594  Sum_probs=72.2

Q ss_pred             CeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhcc
Q psy10073         50 PQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAY  125 (144)
Q Consensus        50 ~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  125 (144)
                      ||.|++|+ .|...   ..|+ ++|.++++           |.|+.|++.|.....|..|+++|.++++|.|+.|++.|.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   68 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRP-----------YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFS   68 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCC-----------EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEES
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCC-----------eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhC
Confidence            58899999 88877   8898 88988888           999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHhhcC
Q psy10073        126 QKEKLQFHVKNKHS  139 (144)
Q Consensus       126 ~~~~l~~H~~~h~~  139 (144)
                      +.+.|..|+++|+|
T Consensus        69 ~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           69 QSSNLITHSRKHTG   82 (82)
T ss_dssp             SHHHHHHHHHHHC-
T ss_pred             ChHHHHHHHHhhCC
Confidence            99999999999975

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=4e-22  Score=120.26  Aligned_cols=87  Identities=21%  Similarity=0.424  Sum_probs=82.1

Q ss_pred             CCCCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCC--CCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         46 NSVIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICV--ACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        46 ~~~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      +++++|.|++  |+ .|.+.   ..|+ ++|.++++           |.|+  .|++.|.+...|..|+++|.++++|.|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   69 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKP-----------YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC   69 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCC-----------EECCSTTCCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCC-----------ccCCCCCCcCccCCHHHHHHHHHHcCCCCCccC
Confidence            5688999997  99 99988   8999 89999999           9999  799999999999999999999999999


Q ss_pred             CCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        118 CLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       118 ~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++|++.|.+...|..|+++|++++||+
T Consensus        70 ~~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (119)
T 2jp9_A           70 KTCQRKFSRSDHLKTHTRTHTGEKPFS   96 (119)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHTCCCEE
T ss_pred             CccCchhCCHHHHHHHHHHhcCCCCee
Confidence            999999999999999999999999873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.8e-21  Score=113.01  Aligned_cols=84  Identities=23%  Similarity=0.423  Sum_probs=75.9

Q ss_pred             CCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCC--cceeCCC
Q psy10073         46 NSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD--KQFKCCL  119 (144)
Q Consensus        46 ~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~  119 (144)
                      +++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|++.|.++  ++|.|++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHK-LSHSGEKP-----------YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS   70 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHH-HHSCSSCS-----------EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHH-HhcCCCCC-----------CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence            567889999999 88877   8899 88999888           99999999999999999999999987  8999999


Q ss_pred             cchhccChHHHHHHHH-hhcCCC
Q psy10073        120 CSYGAYQKEKLQFHVK-NKHSTK  141 (144)
Q Consensus       120 C~~~f~~~~~l~~H~~-~h~~~k  141 (144)
                      |++.|.+...|..|++ +|.++.
T Consensus        71 C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           71 CGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             SCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             ccchhCCHHHHHHHHHHhcCCCC
Confidence            9999999999999986 777653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=6.1e-22  Score=117.31  Aligned_cols=89  Identities=18%  Similarity=0.367  Sum_probs=82.6

Q ss_pred             CCCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCC
Q psy10073         10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKY   85 (144)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~   85 (144)
                      ....++|.|++|++.|.+...|..       |+++|.++++|.|++|+ .|...   ..|+ ++|.++++          
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~----------   73 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLI-------HERTHTDERPYTCDICHKAFRRQDHLRDHR-YIHSKEKP----------   73 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHH-------HHHHHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCT----------
T ss_pred             cCCCcCeECCCCCCccCCHHHHHH-------HHHHcCCCCCcCCCCccchhCCHHHHHHHH-HHhCCCCC----------
Confidence            345568999999999999999999       89999999999999999 99888   8999 99999999          


Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                       |.|++|++.|.....|..|+++|.++++|..
T Consensus        74 -~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           74 -FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             -TSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             -eECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence             9999999999999999999999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.5e-21  Score=116.37  Aligned_cols=84  Identities=23%  Similarity=0.400  Sum_probs=77.6

Q ss_pred             cccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         43 SFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        43 ~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      ..|+++++|.| .|+ .|...   ..|+ +.|.++++           |.|++|++.|.....|..|+++|.++++|.|+
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   69 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRP-----------YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN   69 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCS-----------EECTTTSCEESSSHHHHHHHTTTCCCCCEECS
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcC-----------ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCC
Confidence            35788999999 899 99888   8899 89999888           99999999999999999999999999999999


Q ss_pred             CcchhccChHHHHHHHHhhcC
Q psy10073        119 LCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       119 ~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +|++.|.+...|..|+++|+.
T Consensus        70 ~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           70 ICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             SSCCEESCHHHHHHHHHHHHH
T ss_pred             CCcchhcCHHHHHHHHHHccc
Confidence            999999999999999998874

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.7e-21  Score=118.22  Aligned_cols=87  Identities=20%  Similarity=0.420  Sum_probs=81.3

Q ss_pred             CCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHh---hcCCcceeCC
Q psy10073         46 NSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI---HLGDKQFKCC  118 (144)
Q Consensus        46 ~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~  118 (144)
                      +++++|.|++|+ .|.+.   ..|+ ++|.++++           |.|++|++.|.+...|..|+..   +.++++|.|+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~   70 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKP-----------FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS   70 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHH-HHHSSCCS-----------CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHH-HhCCCCCC-----------eECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC
Confidence            567899999999 99888   8999 99999999           9999999999999999999985   5788999999


Q ss_pred             CcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        119 LCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       119 ~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|++.|.+...|..|+++|++++||+
T Consensus        71 ~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (124)
T 2dlq_A           71 VCQETFRRRMELRLHMVSHTGEMPYK   96 (124)
T ss_dssp             SSCCEESSHHHHHHHHHHHSSSCSEE
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCCcc
Confidence            99999999999999999999999873

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.9e-21  Score=111.82  Aligned_cols=86  Identities=28%  Similarity=0.442  Sum_probs=80.0

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCc
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYK   86 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~   86 (144)
                      ...++|.|++|++.|.+...|..       |+++|.++++|.|++|+ .|...   ..|+ ++|.++++           
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------   64 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKT-------HMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERP-----------   64 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHH-------HGGGCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCCCC-----------
T ss_pred             CCCcCeECCCCCCccCCHHHHHH-------HHHhcCCCCCEeCCCCCCccCCHHHHHHHH-HHhCCCCC-----------
Confidence            45678999999999999999999       89999999999999999 99888   8899 99999999           


Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcce
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQF  115 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  115 (144)
                      |.|++|++.|.....|..|+++|+++++.
T Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           65 FKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999988753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=1.1e-20  Score=114.71  Aligned_cols=85  Identities=22%  Similarity=0.451  Sum_probs=77.6

Q ss_pred             CCCCeeCC--CCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC-
Q psy10073         47 SVIPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL-  119 (144)
Q Consensus        47 ~~~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-  119 (144)
                      ++++|.|+  .|+ .|.+.   ..|+ ++| ++++           |.|++|++.|.+...|..|+++|.++++|.|.. 
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~   68 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHL-HTH-GPRV-----------HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE   68 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHH-GGG-SCCC-----------EECTTTCCEESSHHHHHHHGGGTSCCCCEECCST
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHH-HHc-CCCC-----------eECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCC
Confidence            35789999  899 99888   8899 888 7788           999999999999999999999999999999986 


Q ss_pred             -cchhccChHHHHHHHHhhcCCCCCC
Q psy10073        120 -CSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       120 -C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                       |++.|.+...|..|+++|++++||+
T Consensus        69 ~C~~~f~~~~~l~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           69 GCGKRFSLDFNLRTHVRIHTGDRPYV   94 (124)
T ss_dssp             TCCCEESCHHHHHHHHHHHHCCCCCC
T ss_pred             CCcCccCCHHHHHHHHHHhCCCCceE
Confidence             9999999999999999999999984

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.82  E-value=3.5e-20  Score=102.95  Aligned_cols=62  Identities=19%  Similarity=0.409  Sum_probs=58.7

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      .++++|.|+.|++.|.....|..|+++|.++++|.|.+|++.|.+.+.|.+|+++|++++||
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            44455999999999999999999999999999999999999999999999999999999997

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=4.8e-21  Score=110.14  Aligned_cols=82  Identities=24%  Similarity=0.465  Sum_probs=75.3

Q ss_pred             CCceecC--ccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCc
Q psy10073         13 STKKTCL--YCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYK   86 (144)
Q Consensus        13 ~~~~~C~--~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~   86 (144)
                      .++|.|+  .|++.|.+..+|..       |+++|.++++|.|+.|+ .|...   ..|+ ++|.++++           
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------   62 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTR-------HIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGEKP-----------   62 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHH-------HHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCCCC-----------
T ss_pred             CCceECCCCCCCCccCCHHHHHH-------HHHHhCCCCCccCCCCCcccCCHHHHHHHH-HHcCCCCC-----------
Confidence            4689998  69999999999999       89999999999999999 99888   8999 89999999           


Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      |.|++|++.|.....|..|+++|++++
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           63 FACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             EECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            999999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.82  E-value=4.6e-21  Score=108.32  Aligned_cols=78  Identities=21%  Similarity=0.389  Sum_probs=73.5

Q ss_pred             ceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCC
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICV   90 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~   90 (144)
                      +|.|++|++.|.+..+|..       |+++|.++++|.|+.|+ .|...   ..|+ ++|.++++           |.|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~   61 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLST-------HLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKP-----------HKCQ   61 (82)
T ss_dssp             CEECSSSCCEESSHHHHHH-------HHHHHHTCCCEECSSSCCEESSHHHHHHHH-HHHHTCCC-----------EECT
T ss_pred             CccCCCCcccccCchhHHH-------HHHHcCCCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCC-----------CcCC
Confidence            5899999999999999999       88999999999999999 99888   8999 99999999           9999


Q ss_pred             CCCcccCChhHHHHHHHhhcC
Q psy10073         91 ACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        91 ~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      +|++.|.+...|..|+++|+|
T Consensus        62 ~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           62 VCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TTSCEESSHHHHHHHHHHHC-
T ss_pred             CcchhhCChHHHHHHHHhhCC
Confidence            999999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.81  E-value=6.9e-20  Score=107.21  Aligned_cols=81  Identities=26%  Similarity=0.562  Sum_probs=73.8

Q ss_pred             CCCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCC--CCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         47 SVIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICV--ACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        47 ~~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      ..++|.|+.  |+ .|...   ..|+ ++|.++++           |.|+  .|++.|.....|..|+++|+++++|.|+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   79 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKP-----------YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG   79 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHH-HHHSCCCC-----------EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHH-HHhCCCCC-----------eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence            456799986  99 88877   8899 88998888           9996  6999999999999999999999999999


Q ss_pred             CcchhccChHHHHHHHHhhcC
Q psy10073        119 LCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       119 ~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +|++.|.+...|..|+++|++
T Consensus        80 ~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           80 VCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCcCccCCHHHHHHHHHHhCC
Confidence            999999999999999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.81  E-value=5.6e-20  Score=105.41  Aligned_cols=79  Identities=24%  Similarity=0.563  Sum_probs=71.3

Q ss_pred             CCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCC--CCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         48 VIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICV--ACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        48 ~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      ..+|.|+.  |+ .|...   ..|+ ++|.++++           |.|+  .|++.|.....|..|+++|.++++|.|+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKP-----------YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCC-----------EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCC-----------cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            45788988  99 88877   8888 88888888           9997  59999999999999999999999999999


Q ss_pred             cchhccChHHHHHHHHhhc
Q psy10073        120 CSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       120 C~~~f~~~~~l~~H~~~h~  138 (144)
                      |++.|.+.+.|..|+++|.
T Consensus        71 C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           71 CDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SSCEESSHHHHHHHGGGGC
T ss_pred             CCcccCCHHHHHHHHHhhC
Confidence            9999999999999999884

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.1e-19  Score=101.73  Aligned_cols=62  Identities=21%  Similarity=0.380  Sum_probs=58.4

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.+...|..|+++|++++||+
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            34449999999999999999999999999999999999999999999999999999999985

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=1.9e-20  Score=117.85  Aligned_cols=84  Identities=21%  Similarity=0.361  Sum_probs=80.1

Q ss_pred             eecCccCCccCCccccccccCCCCCCccccCCCCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccccCCCCCceeC
Q psy10073         16 KTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFIC   89 (144)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C   89 (144)
                      |.|++|++.|.+...|..       |+++|.++++|.|+.  |+ .|...   ..|+ ++|.++++           |.|
T Consensus        63 ~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~-----------~~C  123 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVN-------HIRVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKP-----------FKC  123 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHH-------HTHHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCS-----------BCC
T ss_pred             cCCCCcccccCCHHHHHH-------HHHhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCC-----------ccC
Confidence            899999999999999999       899999999999998  99 99888   8999 99999999           999


Q ss_pred             CC--CCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         90 VA--CDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        90 ~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      ++  |++.|.....|..|+++|++++||.|.
T Consensus       124 ~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          124 EFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            97  999999999999999999999999986

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=5.8e-20  Score=106.61  Aligned_cols=84  Identities=20%  Similarity=0.360  Sum_probs=76.4

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCC--CCcccccCCCC
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSEN--CPCMVRPDPVK   84 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~--~~~~~~~~~~~   84 (144)
                      .+.++|.|++|++.|.+...|..       |+++|.++++|.|++|+ .|...   ..|+ +.|.++  ++         
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~---------   65 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNR-------HKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKP---------   65 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHH-------HHHHSCSSCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSS---------
T ss_pred             CCCCCeECCCCCCccCChHHHHH-------HHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCc---------
Confidence            45678999999999999999999       88999999999999999 99888   8999 889886  77         


Q ss_pred             CceeCCCCCcccCChhHHHHHHH-hhcCCc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTL-IHLGDK  113 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  113 (144)
                        |.|++|++.|.....|..|++ .|.++.
T Consensus        66 --~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           66 --YICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             --BCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             --eECCCccchhCCHHHHHHHHHHhcCCCC
Confidence              999999999999999999986 787653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.2e-19  Score=98.66  Aligned_cols=63  Identities=29%  Similarity=0.467  Sum_probs=58.5

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ++++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.+...|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            344455999999999999999999999999999999999999999999999999999999885

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=1.3e-19  Score=105.91  Aligned_cols=69  Identities=20%  Similarity=0.324  Sum_probs=65.8

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCcccC-ChhHHHHHHHhhcC-CcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI-ISQNMRNHTLIHLG-DKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      ..|+ ++|.++++           |.|++|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|+++|+++
T Consensus        13 ~~h~-~~h~~~~~-----------~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A           13 EQWQ-RAIHERGE-----------AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             SHHH-HTTTTTSC-----------CCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             HHHH-HHhccCCC-----------cCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            7888 89999888           99999999999 99999999999998 99999999999999999999999999999


Q ss_pred             CCC
Q psy10073        141 KVK  143 (144)
Q Consensus       141 kp~  143 (144)
                      +|+
T Consensus        81 kp~   83 (98)
T 2gqj_A           81 KPS   83 (98)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            885

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=3.7e-20  Score=109.86  Aligned_cols=85  Identities=16%  Similarity=0.223  Sum_probs=77.7

Q ss_pred             CCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCce
Q psy10073         12 LSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKF   87 (144)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~   87 (144)
                      ..++|.|++|++.|.+..+|..       |+++|  .++|.|++|+ .|...   ..|+ . |.++++           |
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~-------H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~-----------~   70 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGS-------HERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKK-----------L   70 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHH-------HHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGG-----------G
T ss_pred             CCcCeECCCCCCccCCHHHHHH-------HHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCC-----------c
Confidence            4568999999999999999999       78888  4799999999 99888   8898 6 999999           9


Q ss_pred             eCCCCCcccCChhHHHHHHH-hhcCCcceeCC
Q psy10073         88 ICVACDYFTIISQNMRNHTL-IHLGDKQFKCC  118 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  118 (144)
                      .|++|++.|.....|..|++ +|.++++|.+.
T Consensus        71 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           71 TCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             EEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             cCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999999997 99999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=5.8e-19  Score=97.48  Aligned_cols=61  Identities=25%  Similarity=0.353  Sum_probs=56.0

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      +++++|.|++|++.|.....|..|+++|.+++||.|++|++.|.+...|..|+++|+++.+
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            3333499999999999999999999999999999999999999999999999999998754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=3.7e-20  Score=106.18  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=72.4

Q ss_pred             CCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchh
Q psy10073         48 VIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG  123 (144)
Q Consensus        48 ~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  123 (144)
                      ++||.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|++ .+|.|+.|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHI-RTHTGEKP-----------FACDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHCCCC-----------EECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHH-HHcCCCCC-----------ccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHH
Confidence            4789999999 98887   8899 89999999           9999999999999999999999984 88999999999


Q ss_pred             ccChHHHHHHHHhhcC
Q psy10073        124 AYQKEKLQFHVKNKHS  139 (144)
Q Consensus       124 f~~~~~l~~H~~~h~~  139 (144)
                      |.+...|..|++.+++
T Consensus        68 f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           68 LSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHH
Confidence            9999999999987653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=4.1e-19  Score=105.70  Aligned_cols=81  Identities=17%  Similarity=0.261  Sum_probs=75.2

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCc
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYK   86 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~   86 (144)
                      .+.++|.| .|++.|.+...|..       |+++|.++++|.|++|+ .|...   ..|+ ++|.++++           
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------   65 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDR-------HMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKP-----------   65 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHH-------HHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTTCCCCC-----------
T ss_pred             CCCCCEec-cCCCccCCHHHHHH-------HHHHcCCCcCccCCCCCcccCCHHHHHHHH-HHcCCCCC-----------
Confidence            45678999 99999999999999       89999999999999999 99888   8999 99999999           


Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      |.|++|++.|.....|..|++.|..
T Consensus        66 ~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           66 YECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             eeCCCCcchhcCHHHHHHHHHHccc
Confidence            9999999999999999999998764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.75  E-value=1.7e-18  Score=98.34  Aligned_cols=61  Identities=18%  Similarity=0.272  Sum_probs=54.7

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHH-HhhcCCC
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV-KNKHSTK  141 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~k  141 (144)
                      +...++|.|++|++.|.....|..|+++|++++||.|++|++.|.+.+.|.+|+ ++|.+|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            334444999999999999999999999999999999999999999999999997 5687764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.75  E-value=1.6e-18  Score=98.29  Aligned_cols=74  Identities=24%  Similarity=0.544  Sum_probs=68.7

Q ss_pred             CeeC--CCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCC--CCcccCChhHHHHHHHhhcCCcceeCCC--
Q psy10073         50 PQSC--KHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVA--CDYFTIISQNMRNHTLIHLGDKQFKCCL--  119 (144)
Q Consensus        50 ~~~C--~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--  119 (144)
                      ||.|  +.|+ .|...   ..|+ ++|.++++           |.|++  |++.|.....|..|+++|++   |.|+.  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~   65 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLP-----------YECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDD   65 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCC-----------EECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCC-----------eeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCC
Confidence            5889  8899 88877   8899 89999999           99988  99999999999999999998   99999  


Q ss_pred             -cchhccChHHHHHHHHhhc
Q psy10073        120 -CSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       120 -C~~~f~~~~~l~~H~~~h~  138 (144)
                       |++.|.+.+.|..|+++|+
T Consensus        66 ~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           66 SCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             SCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCccCCHHHHHHHHHhcC
Confidence             9999999999999999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.75  E-value=7.1e-19  Score=105.46  Aligned_cols=88  Identities=9%  Similarity=0.033  Sum_probs=75.0

Q ss_pred             CCCceecCccCCccCCccccccccCCCCCCccc--cCCCCCe-eCCCCC-CC--cch---hhhhhhcccCCCCcccccCC
Q psy10073         12 LSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSF--LNSVIPQ-SCKHCK-NF--TSS---DVNLLMEHSENCPCMVRPDP   82 (144)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~--h~~~~~~-~C~~C~-~f--~~~---~~H~~~~h~~~~~~~~~~~~   82 (144)
                      +.++|.|++|++.|.+..+|..       |+++  |.+.+++ .|++|+ .|  ...   ..|+ ++|.++++       
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~-------H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~-------   80 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTV-------HMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKV-------   80 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHH-------HHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSS-------
T ss_pred             CCCCEECCccCchhcCHHHHHH-------HHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcc-------
Confidence            4568999999999999999999       7777  6666665 499999 98  555   8899 89999999       


Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                          |.|++|++.|.....|..|+++|........+
T Consensus        81 ----~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           81 ----LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             ----CBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             ----eECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence                99999999999999999999998766554443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=7.7e-19  Score=103.06  Aligned_cols=61  Identities=18%  Similarity=0.276  Sum_probs=43.1

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHH-hh---cCCcceeCCCcchhccChHHHHHH-HHhhcCCCCC
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTL-IH---LGDKQFKCCLCSYGAYQKEKLQFH-VKNKHSTKVK  143 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~kp~  143 (144)
                      ++++|.|++|++.|...+.|..|++ +|   .+++||.|++||+.|.+.+.|..| +++|+|++||
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy   80 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENF   80 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCe
Confidence            3344777777777777777777775 46   456777777777777777777777 6777777776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.74  E-value=2.5e-18  Score=90.57  Aligned_cols=56  Identities=30%  Similarity=0.592  Sum_probs=51.2

Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            34599999999999999999999999999999999999999999999999999874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=4.4e-18  Score=96.79  Aligned_cols=71  Identities=17%  Similarity=0.302  Sum_probs=38.1

Q ss_pred             CccccCCCCCeeCCCCC-CCcch---hhhhhhcccCC----CCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         41 NMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSEN----CPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        41 h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~----~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      |+++|.++++|.|++|+ .|...   ..|+ +.+...    ++           |.|++|++.|.....|..|+++|+++
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~-~~~~~~~~~~~~-----------~~C~~C~~~f~~~~~L~~H~~~h~~~   73 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDPNFVPAA-----------FVCSKCGKTFTRRNTMARHADNCAGP   73 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHH-HHTTCSSCCCCC-----------EECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCcCCCcc-----------eECCCCCChhCCHHHHHHHHHHccCC
Confidence            45555555555555555 55554   5555 433322    33           55555555555555555555555555


Q ss_pred             cceeCCCcchh
Q psy10073        113 KQFKCCLCSYG  123 (144)
Q Consensus       113 ~~~~C~~C~~~  123 (144)
                      +++.|..|+..
T Consensus        74 ~~~~~~~~~~~   84 (86)
T 1x6h_A           74 DGVEGENSGPS   84 (86)
T ss_dssp             CSCCCCCCCCC
T ss_pred             CCcccCCCCCC
Confidence            55555555543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=1.8e-18  Score=101.08  Aligned_cols=82  Identities=21%  Similarity=0.362  Sum_probs=75.1

Q ss_pred             CCCCceecCc--cCCccCCccccccccCCCCCCccccCCCCCeeCC--CCC-CCcch---hhhhhhcccCCCCcccccCC
Q psy10073         11 PLSTKKTCLY--CNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMVRPDP   82 (144)
Q Consensus        11 ~~~~~~~C~~--C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~   82 (144)
                      ...++|.|..  |++.|.+...|..       |+++|.++++|.|+  .|+ .|...   ..|+ ++|.++++       
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-------   75 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKA-------HLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKP-------   75 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHH-------HHHHHSCCCCEECCSSSCCCEESSHHHHHHHH-HHHTSCCS-------
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHH-------HHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH-HHhCCCCC-------
Confidence            3455799997  9999999999999       89999999999996  699 99888   8899 99999999       


Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                          |.|++|++.|.....|..|+++|++
T Consensus        76 ----~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           76 ----FQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ----CBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             ----eECCCCcCccCCHHHHHHHHHHhCC
Confidence                9999999999999999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=1.3e-18  Score=99.60  Aligned_cols=79  Identities=24%  Similarity=0.457  Sum_probs=73.4

Q ss_pred             CCceecCc--cCCccCCccccccccCCCCCCccccCCCCCeeCC--CCC-CCcch---hhhhhhcccCCCCcccccCCCC
Q psy10073         13 STKKTCLY--CNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMVRPDPVK   84 (144)
Q Consensus        13 ~~~~~C~~--C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~   84 (144)
                      ..+|.|+.  |++.|.+..+|..       |+++|.++++|.|+  .|+ .|...   ..|+ ++|.++++         
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~---------   65 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKA-------HLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRP---------   65 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHH-------HHTTSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCC---------
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHH-------HHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCC---------
Confidence            45799999  9999999999999       88999999999997  699 99888   8899 99999999         


Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                        |.|++|++.|.....|..|+++|.
T Consensus        66 --~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           66 --FQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             --EECSSSSCEESSHHHHHHHGGGGC
T ss_pred             --ccCCCCCcccCCHHHHHHHHHhhC
Confidence              999999999999999999999873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.6e-18  Score=92.07  Aligned_cols=54  Identities=17%  Similarity=0.306  Sum_probs=46.9

Q ss_pred             CCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         48 VIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        48 ~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      |+||.|++|| .|...   ..|+ ++|++++|           |.|++|++.|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp-----------~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRP-----------RSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCC-----------EECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcC-----------eECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6788888888 88877   8888 88999988           999999999999999999999998864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.73  E-value=4.7e-18  Score=89.49  Aligned_cols=56  Identities=25%  Similarity=0.514  Sum_probs=54.1

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +|.|++|++.|.....|..|+++|.++++|.|+.|++.|.+.+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            38999999999999999999999999999999999999999999999999999886

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=7.7e-18  Score=95.77  Aligned_cols=70  Identities=17%  Similarity=0.236  Sum_probs=63.8

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCC----cceeCCCcchhccChHHHHHHHHhhc
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD----KQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      .+|+ ++|.++++           |.|.+|++.|.....|..|++.+.++    ++|.|++|++.|.+...|..|+++|+
T Consensus         4 ~~H~-~~H~~~k~-----------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A            4 GSSG-RTHTGEKP-----------YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             TCCS-TTCCCCCC-----------EECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             cccc-ceecCCCC-----------CcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc
Confidence            4677 88888888           99999999999999999999887665    78999999999999999999999999


Q ss_pred             CCCCCC
Q psy10073        139 STKVKD  144 (144)
Q Consensus       139 ~~kp~~  144 (144)
                      ++++++
T Consensus        72 ~~~~~~   77 (86)
T 1x6h_A           72 GPDGVE   77 (86)
T ss_dssp             CCCSCC
T ss_pred             CCCCcc
Confidence            998874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=7.5e-18  Score=94.42  Aligned_cols=67  Identities=15%  Similarity=0.401  Sum_probs=47.6

Q ss_pred             CCCCCeeCCC--CC-CCcch---hhhhhh-cccCCCCcccccCCCCCceeCCC--CCcccCChhHHHHHHHhhcCCccee
Q psy10073         46 NSVIPQSCKH--CK-NFTSS---DVNLLM-EHSENCPCMVRPDPVKYKFICVA--CDYFTIISQNMRNHTLIHLGDKQFK  116 (144)
Q Consensus        46 ~~~~~~~C~~--C~-~f~~~---~~H~~~-~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~  116 (144)
                      +++++|.|+.  |+ .|...   ..|+ + .|.++++           |.|++  |++.|.....|..|+++|++++||.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~~H~~~~~-----------~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHK-KYQHIHQKS-----------FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHH-HHGGGSCCC-----------EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHH-HHHhCCCCC-----------eECCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            3556677765  77 66666   6676 5 5777777           77777  7777777777777777777777777


Q ss_pred             CCCcchhc
Q psy10073        117 CCLCSYGA  124 (144)
Q Consensus       117 C~~C~~~f  124 (144)
                      |++|++.|
T Consensus        71 C~~C~k~F   78 (79)
T 2dlk_A           71 CEFSGPSS   78 (79)
T ss_dssp             CCSSSCCC
T ss_pred             CCCCCCCC
Confidence            77777766

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.1e-17  Score=97.29  Aligned_cols=66  Identities=15%  Similarity=0.323  Sum_probs=60.9

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCccc-CChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHH-HHhhcCC
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFT-IISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFH-VKNKHST  140 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  140 (144)
                      ..|+ +.+.++++           |.|++|++.| .....|..|+++| ++++|.|.+|++.|.+.+.|..| +++|+++
T Consensus        23 ~~~~-~~~~~~~~-----------~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           23 EQWY-LEIVDKGS-----------VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             HHHH-HHHHHTSC-----------EECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             HHHH-HHhcCCCC-----------cCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            6777 78888888           9999999999 9999999999999 99999999999999999999999 8888764


Q ss_pred             C
Q psy10073        141 K  141 (144)
Q Consensus       141 k  141 (144)
                      .
T Consensus        90 p   90 (96)
T 2ctd_A           90 P   90 (96)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.2e-17  Score=93.33  Aligned_cols=68  Identities=26%  Similarity=0.431  Sum_probs=59.1

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHH-hhcCC-cceeCCCcchhccChHHHHHHHHhhcC-
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-IHLGD-KQFKCCLCSYGAYQKEKLQFHVKNKHS-  139 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~-  139 (144)
                      .+|+ ++|.++++           |.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.+...|..|++++++ 
T Consensus         4 ~~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            4 GSSG-RTHSGEKP-----------YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCC-CCCSCCCS-----------EECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             Cccc-cccCCCCC-----------eECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3577 78888888           999999999999999999997 67764 899999999999999999999998655 


Q ss_pred             CCC
Q psy10073        140 TKV  142 (144)
Q Consensus       140 ~kp  142 (144)
                      +.|
T Consensus        72 ~~p   74 (77)
T 2ct1_A           72 SGP   74 (77)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            455

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=8.5e-18  Score=91.10  Aligned_cols=61  Identities=21%  Similarity=0.376  Sum_probs=55.7

Q ss_pred             hcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHh-h-cCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         68 MEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLI-H-LGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        68 ~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      ++|.++++           |.|+.|++.|.....|..|++. | .+++||.|+.|++.|.+.+.|..|+++|++
T Consensus         3 ~~h~~~k~-----------~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHT-----------YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTE-----------EECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcc-----------eECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45666666           9999999999999999999998 7 589999999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=1.5e-17  Score=93.07  Aligned_cols=63  Identities=14%  Similarity=0.260  Sum_probs=55.1

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcC---CcceeCCCcchhccChHHHHHHH-HhhcCCCCC
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLG---DKQFKCCLCSYGAYQKEKLQFHV-KNKHSTKVK  143 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~kp~  143 (144)
                      |+++++|.|.+|++.|.....|..|+++|.+   +++|.|++|++.|.+...|..|+ ..|.+++|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3444459999999999999999999999986   89999999999999999999999 467666654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.71  E-value=3e-19  Score=109.23  Aligned_cols=111  Identities=14%  Similarity=0.059  Sum_probs=83.1

Q ss_pred             cCCCCCceecCccCCccC--CccccccccCCCCCCccccCCCCCeeCCCCC-CCc-----ch---hhhhhhcccCCCCcc
Q psy10073          9 LVPLSTKKTCLYCNKYVP--SDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFT-----SS---DVNLLMEHSENCPCM   77 (144)
Q Consensus         9 ~~~~~~~~~C~~C~~~f~--~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~-----~~---~~H~~~~h~~~~~~~   77 (144)
                      ..++.++|.|...+....  ....+..        ......++++.|++|+ .|.     ..   ..+. ..|.+++|  
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~--------~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h-~~h~~~~~--   74 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRY--------HQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRL-LASKAISQ--   74 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHH--------TTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHH-HHHHHHCS--
T ss_pred             hcccccccccccCCeeeeecHHhhhcc--------ccCChhhCcccchhhhcccCCCcccCCHHHHHHH-HHhCCCCC--
Confidence            456778898876554332  2211111        1122335668899888 776     22   3333 35778888  


Q ss_pred             cccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073         78 VRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus        78 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                               |.|++|++.|.....|..|+++|  ++||.|+.|++.|.+.+.|..|+++|+++-
T Consensus        75 ---------~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           75 ---------FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             ---------EECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             ---------eECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence                     99999999999999999999999  889999999999999999999999999874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=5.9e-17  Score=90.72  Aligned_cols=62  Identities=23%  Similarity=0.274  Sum_probs=57.8

Q ss_pred             CCCceeCCC--CCcccCChhHHHHHHH-hhcCCcceeCCC--cchhccChHHHHHHHHhhcCCCCCC
Q psy10073         83 VKYKFICVA--CDYFTIISQNMRNHTL-IHLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        83 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+.+.|..|+++|++++||.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            445599987  9999999999999999 799999999999  9999999999999999999999984

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.9e-17  Score=86.41  Aligned_cols=56  Identities=21%  Similarity=0.453  Sum_probs=52.2

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHH-HhhcCCC
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV-KNKHSTK  141 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~k  141 (144)
                      +|.|++|++.|.....|..|+++|++++||.|+.|++.|.+.+.|..|+ ++|.++.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            4999999999999999999999999999999999999999999999997 6777653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.2e-16  Score=89.19  Aligned_cols=64  Identities=19%  Similarity=0.313  Sum_probs=58.6

Q ss_pred             ccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         42 MSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        42 ~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      ...+.++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKP-----------YKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCS-----------EECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcC-----------eeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4456778999999999 99888   8899 89999999           9999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.9e-16  Score=87.39  Aligned_cols=54  Identities=26%  Similarity=0.563  Sum_probs=50.8

Q ss_pred             CceeCC--CCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhc
Q psy10073         85 YKFICV--ACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus        85 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      ++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.+.+.|.+|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            339997  599999999999999999999999999999999999999999999885

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.1e-16  Score=92.66  Aligned_cols=68  Identities=22%  Similarity=0.430  Sum_probs=58.7

Q ss_pred             ccccCCCCCeeCCCCC-CCcch---hhhhhh-cc---cCCCCcccccCCCCCceeCCCCCcccCChhHHHHH-HHhhcCC
Q psy10073         42 MSFLNSVIPQSCKHCK-NFTSS---DVNLLM-EH---SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH-TLIHLGD  112 (144)
Q Consensus        42 ~~~h~~~~~~~C~~C~-~f~~~---~~H~~~-~h---~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  112 (144)
                      +....|++||.|+.|| .|...   ..|+ + +|   .+++|           |.|.+|++.|.....|..| +++|+++
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~-r~~H~~~~~ekp-----------f~C~~Cgk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHV-DSEHPNVVLNSS-----------YVCVECNFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHH-HHHCSSCCCSCC-----------EEETTTTEEESSTHHHHTHHHHTSTTC
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHH-HhhCCCCCCCCC-----------cCCCCCCcccCCHHHHHHHHHHhcCCC
Confidence            3345688999999999 99887   8898 6 58   55778           9999999999999999999 8999999


Q ss_pred             cceeCCCcc
Q psy10073        113 KQFKCCLCS  121 (144)
Q Consensus       113 ~~~~C~~C~  121 (144)
                      +||.|.++.
T Consensus        78 kpy~C~~~~   86 (102)
T 2ghf_A           78 ENFKLTMVK   86 (102)
T ss_dssp             CCEEEEECC
T ss_pred             CCeeCCccc
Confidence            999998754

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=2.9e-16  Score=85.06  Aligned_cols=59  Identities=20%  Similarity=0.308  Sum_probs=54.7

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC-CcchhccChHHHHHHHHhhcCCCCC
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC-LCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ++++|.|++|++.|. ...|..|+++ ++++||.|+ .|++.|...+.|..|+++|.+.+|.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            445599999999999 9999999999 999999999 9999999999999999999988763

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=5.2e-16  Score=89.79  Aligned_cols=58  Identities=19%  Similarity=0.183  Sum_probs=54.9

Q ss_pred             eeCCCCCcccCChhHHHHHHHh-hcCCcc--------eeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLI-HLGDKQ--------FKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +.|..|++.|.....|..|+++ |.++++        |.|++|++.|.+...|..|+++|++++||+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            7899999999999999999998 988887        999999999999999999999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.62  E-value=1.2e-16  Score=90.50  Aligned_cols=74  Identities=16%  Similarity=0.314  Sum_probs=68.1

Q ss_pred             ceec--CccCCccCCccccccccCCCCCCccccCCCCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccccCCCCCc
Q psy10073         15 KKTC--LYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYK   86 (144)
Q Consensus        15 ~~~C--~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~   86 (144)
                      ||.|  +.|++.|.+..+|..       |+++|.++++|.|+.  |+ .|...   ..|+ ++|.+              
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~-------H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--------------   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKV-------HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG--------------   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHH-------HHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHS--------------
T ss_pred             CccCCCCCCCcccCCHHHHHH-------HHHHhCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCC--------------
Confidence            5899  999999999999999       899999999999988  99 99888   8899 88875              


Q ss_pred             eeCCC---CCcccCChhHHHHHHHhhc
Q psy10073         87 FICVA---CDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        87 ~~C~~---C~~~f~~~~~l~~H~~~h~  110 (144)
                      |.|++   |++.|.....|..|+++|+
T Consensus        59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            78999   9999999999999998864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=8.7e-16  Score=84.53  Aligned_cols=62  Identities=21%  Similarity=0.386  Sum_probs=57.3

Q ss_pred             CCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         40 PNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        40 ~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ++.++|.++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|+++.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKP-----------YKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCC-----------EECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCC-----------eECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            367889999999999999 99888   8999 99999999           999999999999999999999998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=8.5e-16  Score=85.00  Aligned_cols=61  Identities=26%  Similarity=0.525  Sum_probs=55.0

Q ss_pred             cccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcce
Q psy10073         43 SFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF  115 (144)
Q Consensus        43 ~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  115 (144)
                      ..+.++++|.|+.|+ .|...   ..|+ ++|.++++           |.|.+|++.|.....|..|+++|++++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKP-----------YRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCS-----------EECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHH-HHcCCCCC-----------EECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            346778899999999 99888   8899 99999999           99999999999999999999999999886

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=1.6e-16  Score=92.76  Aligned_cols=76  Identities=9%  Similarity=0.026  Sum_probs=66.5

Q ss_pred             ccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCc-ch---hhhhhhcccC-CCCcccccCCCCCceeCCCCCcccC
Q psy10073         24 YVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFT-SS---DVNLLMEHSE-NCPCMVRPDPVKYKFICVACDYFTI   97 (144)
Q Consensus        24 ~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~-~~---~~H~~~~h~~-~~~~~~~~~~~~~~~~C~~C~~~f~   97 (144)
                      .+.....+..       |+++|.++++|.|++|+ .|. ..   ..|+ ++|.+ +++           |.|.+|++.|.
T Consensus         5 s~~~~~~~~~-------h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~~~~~~-----------~~C~~C~k~F~   65 (98)
T 2gqj_A            5 SSGPGGPEEQ-------WQRAIHERGEAVCPTCNVVTRKTLVGLKKHM-EVCQKLQDA-----------LKCQHCRKQFK   65 (98)
T ss_dssp             CCCCCCSCSH-------HHHTTTTTSCCCCTTTCCCCSSCSHHHHHHH-HHHHHHHHH-----------HSCSSSCCCCS
T ss_pred             CCCCCCcHHH-------HHHHhccCCCcCCCCCCCChhhhHHHHHHHH-HHHcCCCCC-----------EECCCCCCccC
Confidence            4555566777       78999999999999999 998 76   8999 89988 888           99999999999


Q ss_pred             ChhHHHHHHHhhcCCcceeCC
Q psy10073         98 ISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        98 ~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      ....|..|+++|++++|..-.
T Consensus        66 ~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           66 SKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             CHHHHHHHHHHHSCSCSSCCC
T ss_pred             CHHHHHHHHHHHcCCCCCCCC
Confidence            999999999999999986543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=1.2e-15  Score=87.19  Aligned_cols=55  Identities=24%  Similarity=0.404  Sum_probs=52.6

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      ++|.|++|++.|.....|..|+++|.+++||.|+.|++.|.+.+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            4499999999999999999999999999999999999999999999999999874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=3.9e-17  Score=90.00  Aligned_cols=71  Identities=14%  Similarity=0.075  Sum_probs=57.9

Q ss_pred             CccccccccCCCCCCccccCCCCCeeCCCCC-CCcchhhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHH
Q psy10073         27 SDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH  105 (144)
Q Consensus        27 ~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  105 (144)
                      +..+|..       |+++|.++++|.|++|+ .|... ..+ ..   +++           |.|++|++.|.....|..|
T Consensus         2 ~~~~l~~-------H~~~h~~~~~~~C~~C~k~f~~~-~~l-~~---~~~-----------~~C~~C~~~f~~~~~l~~H   58 (73)
T 2ctu_A            2 SSGSSGK-------RQKIHLGDRSQKCSKCGIIFIRR-STL-SR---RKT-----------PMCEKCRKDSCQEAALNKD   58 (73)
T ss_dssp             CCCSCCC-------CCCCCCCCSEEECSSSCCEEECC-CCC-CC---SSS-----------CCCHHHHHTCSCCCSSCCC
T ss_pred             cchhHHH-------HHHHhCCCCCeeCCcccchhCCH-HHh-Cc---CCC-----------CCCCCCChhhcCHHHHHHH
Confidence            3456777       78899999999999999 88775 112 11   566           9999999999999999999


Q ss_pred             HHhhcCCcceeCCCc
Q psy10073        106 TLIHLGDKQFKCCLC  120 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C  120 (144)
                      +++|++++||.|++|
T Consensus        59 ~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           59 EGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCCCCCSSCCCC
T ss_pred             HHhhcCCCCCCCCCC
Confidence            999999999999887

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=4.1e-15  Score=81.32  Aligned_cols=60  Identities=25%  Similarity=0.405  Sum_probs=53.5

Q ss_pred             ccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcce
Q psy10073         44 FLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQF  115 (144)
Q Consensus        44 ~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  115 (144)
                      .|.++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|++++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~-----------~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRP-----------FKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSCS-----------EECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCC-----------EeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            46788899999999 88887   8899 88999988           99999999999999999999999988764

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.57  E-value=7.2e-16  Score=80.22  Aligned_cols=52  Identities=13%  Similarity=0.101  Sum_probs=48.8

Q ss_pred             CcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073         93 DYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus        93 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++.|.....|..|+++|+++++|.|++|++.|.+.+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4678888999999999999999999999999999999999999999999984

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.3e-15  Score=88.49  Aligned_cols=75  Identities=12%  Similarity=-0.001  Sum_probs=64.5

Q ss_pred             CccCCccccccccCCCCCCccccCCCCCeeCCCCC-CC-cch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccC
Q psy10073         23 KYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NF-TSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTI   97 (144)
Q Consensus        23 ~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f-~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~   97 (144)
                      ..|.....|..       |++.+.++++|.|+.|+ .| ...   ..|+ ++| ++++           |.|.+|++.|.
T Consensus        14 ~~~~~~~~~~~-------~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~-~~h-~~k~-----------~~C~~Cgk~F~   73 (96)
T 2ctd_A           14 PVYAAGSLEEQ-------WYLEIVDKGSVSCPTCQAVGRKTIEGLKKHM-ENC-KQEM-----------FTCHHCGKQLR   73 (96)
T ss_dssp             CSSCTTCHHHH-------HHHHHHHTSCEECTTTCSCEESSHHHHHHHH-HHH-CCCC-----------CCCSSSCCCCS
T ss_pred             CCCCCchHHHH-------HHHHhcCCCCcCCCCCCCCcccCHHHHHHHH-HHH-CCCC-----------eECCCCCCeeC
Confidence            45667777777       78888899999999999 99 777   8999 999 9999           99999999999


Q ss_pred             ChhHHHHH-HHhhcCCcceeC
Q psy10073         98 ISQNMRNH-TLIHLGDKQFKC  117 (144)
Q Consensus        98 ~~~~l~~H-~~~h~~~~~~~C  117 (144)
                      ....|..| +++|+++..|.+
T Consensus        74 ~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           74 SLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             SHHHHHHHHHHHTCCCSSCSC
T ss_pred             CHHHHHHHhHHhcCCCCCCCC
Confidence            99999999 899986554443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=9.1e-15  Score=81.40  Aligned_cols=62  Identities=23%  Similarity=0.424  Sum_probs=54.2

Q ss_pred             CccccCCCCCeeCCCCC-CCcch---hhhhhh-cccCC-CCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcC-Cc
Q psy10073         41 NMSFLNSVIPQSCKHCK-NFTSS---DVNLLM-EHSEN-CPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG-DK  113 (144)
Q Consensus        41 h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~-~h~~~-~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~  113 (144)
                      |+++|.+++||.|++|+ .|...   ..|+ + .|.++ ++           |.|++|++.|.....|..|++.+.+ +.
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~~h~~~~~~-----------~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHI-LQKHTENVAK-----------FHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHH-HHHSSSSCSS-----------EECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHH-HHhcCCCCCc-----------cCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            89999999999999999 99988   8898 5 67764 78           9999999999999999999987544 44


Q ss_pred             c
Q psy10073        114 Q  114 (144)
Q Consensus       114 ~  114 (144)
                      |
T Consensus        74 p   74 (77)
T 2ct1_A           74 P   74 (77)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=1.1e-14  Score=82.61  Aligned_cols=60  Identities=20%  Similarity=0.291  Sum_probs=53.5

Q ss_pred             ccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHH-HhhcCCc
Q psy10073         42 MSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT-LIHLGDK  113 (144)
Q Consensus        42 ~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  113 (144)
                      +.++.+.++|.|++|| .|...   ..|+ ++|++++|           |.|++|++.|.....|.+|+ ++|++|.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHL-RLLHAAQV-----------FPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHH-HTTSCSSS-----------EECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhh-hhccCCCc-----------cCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4567788899999999 99998   9999 99999999           99999999999999999997 5687764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.55  E-value=7.9e-15  Score=80.58  Aligned_cols=56  Identities=25%  Similarity=0.481  Sum_probs=51.0

Q ss_pred             CCCCceeCCC--CCcccCChhHHHHHHHhhcCCcceeCCC--cchhccChHHHHHHHHhh
Q psy10073         82 PVKYKFICVA--CDYFTIISQNMRNHTLIHLGDKQFKCCL--CSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  137 (144)
                      ...++|.|..  |++.|.....|..|+++|++++||.|.+  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3445599998  9999999999999999999999999965  999999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.50  E-value=2.2e-16  Score=96.38  Aligned_cols=81  Identities=11%  Similarity=0.162  Sum_probs=67.4

Q ss_pred             CCCCCceecCccCCccC------CccccccccCCCCCCccccCCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccc
Q psy10073         10 VPLSTKKTCLYCNKYVP------SDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVR   79 (144)
Q Consensus        10 ~~~~~~~~C~~C~~~f~------~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~   79 (144)
                      .+..+.+.|++|++.|.      ....|..       |+ .|.+++||.|++|| .|...   ..|+ ++|  ++|    
T Consensus        36 ~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~-------h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H--~~~----  100 (129)
T 2wbt_A           36 TPEQKRLIRAIVKTLIHNPQLLDESSYLYR-------LL-ASKAISQFVCPLCLMPFSSSVSLKQHI-RYT--EHT----  100 (129)
T ss_dssp             CHHHHHHHHHHHHHHHHCGGGTTTHHHHHH-------HH-HHHHHCSEECTTTCCEESSHHHHHHHH-HHT--CCC----
T ss_pred             ChhhCcccchhhhcccCCCcccCCHHHHHH-------HH-HhCCCCCeECCCCCcccCCHhHHHHHH-HHC--CCC----
Confidence            34445688999888776      3444555       44 68889999999999 99888   8999 888  778    


Q ss_pred             cCCCCCceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        80 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                             |.|++|++.|.....|..|+++|+++
T Consensus       101 -------~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          101 -------KVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -------CBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             -------CCCCCCCcccCCHHHHHHHHHHHCCc
Confidence                   99999999999999999999999875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.5e-14  Score=78.07  Aligned_cols=58  Identities=19%  Similarity=0.165  Sum_probs=51.3

Q ss_pred             ccccCCCCCeeCCCCC-CCcch---hhhhhhc-c-cCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         42 MSFLNSVIPQSCKHCK-NFTSS---DVNLLME-H-SENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        42 ~~~h~~~~~~~C~~C~-~f~~~---~~H~~~~-h-~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      +++|.+++||.|+.|+ .|...   ..|+ +. | .++++           |.|++|++.|...+.|..|++++++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~~H~~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHY-VTSHKRNVKV-----------YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHH-HHHSSSSCCC-----------EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHH-HHHcCCCCcC-----------eECCCCCCccCCHHHHHHHHHHHcC
Confidence            4678899999999999 99888   8898 76 7 57888           9999999999999999999998875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.50  E-value=2.2e-14  Score=74.52  Aligned_cols=45  Identities=20%  Similarity=0.417  Sum_probs=40.9

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHH-hhcCCcceeCCCcchhccC
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTL-IHLGDKQFKCCLCSYGAYQ  126 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  126 (144)
                      +++++|.|++|++.|.....|..|++ +|.+++||.|++|++.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            44445999999999999999999997 8999999999999999986

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.49  E-value=2.3e-14  Score=71.89  Aligned_cols=45  Identities=16%  Similarity=0.220  Sum_probs=39.1

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSG-SSGTGEKP-----------YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSSCS-----------CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCC-CccCCCCc-----------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1e-16  Score=88.31  Aligned_cols=63  Identities=17%  Similarity=0.222  Sum_probs=57.2

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      ..|+ ++|.++++           |.|++|++.|.....|..       +++|.|+.|++.|.+.+.|..|+++|++++|
T Consensus         7 ~~H~-~~h~~~~~-----------~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A            7 GKRQ-KIHLGDRS-----------QKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCCC-CCCCCCSE-----------EECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             HHHH-HHhCCCCC-----------eeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            5677 77777777           999999999999988876       7899999999999999999999999999999


Q ss_pred             CC
Q psy10073        143 KD  144 (144)
Q Consensus       143 ~~  144 (144)
                      |+
T Consensus        68 ~~   69 (73)
T 2ctu_A           68 SG   69 (73)
T ss_dssp             SS
T ss_pred             CC
Confidence            85

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.4e-14  Score=71.82  Aligned_cols=45  Identities=20%  Similarity=0.208  Sum_probs=38.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSG-SSGTGEKP-----------YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCS-----------EECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             Ccc-CCcCCCCC-----------eeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.3e-14  Score=71.91  Aligned_cols=45  Identities=18%  Similarity=0.294  Sum_probs=39.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSG-SSGTGVKP-----------YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSSCCCS-----------EECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             Ccc-cccCCCcC-----------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 77777777           9999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.2e-14  Score=71.92  Aligned_cols=45  Identities=22%  Similarity=0.237  Sum_probs=38.5

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSG-SSGTGERP-----------HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSSCCCS-----------EECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCc-CCcCCCCC-----------eeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.8e-14  Score=72.32  Aligned_cols=45  Identities=16%  Similarity=0.095  Sum_probs=38.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSG-SSGSGERP-----------YGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCCSCCCC-----------EECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCC-CCCCCCCC-----------EEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.3e-14  Score=71.87  Aligned_cols=45  Identities=22%  Similarity=0.282  Sum_probs=38.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSG-SSGTGEKP-----------YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSS-CTTSSCCS-----------EECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             Ccc-cCCCCCcC-----------eECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           8999999999999999999988988889988876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.4e-14  Score=71.82  Aligned_cols=45  Identities=16%  Similarity=0.170  Sum_probs=38.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSG-SSGTGENP-----------YECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSSCC-----------EECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCC-CCCCCCcC-----------cCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3e-14  Score=71.39  Aligned_cols=45  Identities=16%  Similarity=0.221  Sum_probs=39.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSG-SSGTGEKP-----------YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCS-----------CBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCC-CCCCCCCC-----------ccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466 77777777           9999999999999999999999999999999887

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=3.2e-14  Score=74.49  Aligned_cols=52  Identities=25%  Similarity=0.552  Sum_probs=42.5

Q ss_pred             CCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         47 SVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        47 ~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ++++|.|++|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHL-RTHTGEKP-----------YKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHH-HHHHCCCC-----------EECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHH-HHcCCCCC-----------cCCCCCcchhCCHHHHHHHHHHhc
Confidence            45788899999 88887   7888 88888888           999999999999999999998875

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.6e-14  Score=71.68  Aligned_cols=45  Identities=18%  Similarity=0.223  Sum_probs=38.5

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSG-SSGTGEKP-----------YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSS-SCSSCCCS-----------EECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCC-CCCCCCcC-----------cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.1e-14  Score=70.74  Aligned_cols=44  Identities=18%  Similarity=0.156  Sum_probs=37.5

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         1 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GS-SGSSGEKP-----------FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CC-CCCSSCCC-----------EECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CC-CCcCCCcC-----------ccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 56666666           9999999999999999999999999999999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.48  E-value=2.6e-14  Score=71.68  Aligned_cols=45  Identities=16%  Similarity=0.189  Sum_probs=38.3

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSG-SSGTGEKR-----------YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-SSCTTSCC-----------EECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCc-cCCCCCcC-----------cCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.9e-14  Score=72.17  Aligned_cols=45  Identities=18%  Similarity=0.184  Sum_probs=39.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSG-SSGSSTKS-----------HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSCS-----------EECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCc-CCCCCCCC-----------eECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.8e-14  Score=71.53  Aligned_cols=45  Identities=22%  Similarity=0.266  Sum_probs=38.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSG-SSGSGEKP-----------YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CTTCCCCS-----------EECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCC-CCCCCCCC-----------eECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466 77777777           9999999999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.5e-14  Score=71.71  Aligned_cols=45  Identities=13%  Similarity=0.106  Sum_probs=39.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSG-SSGTGEKL-----------YNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCCC-----------CCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCc-ccCCCCCC-----------eECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.7e-14  Score=71.62  Aligned_cols=45  Identities=22%  Similarity=0.270  Sum_probs=39.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSG-SSGSGEKP-----------YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSSSCS-----------EECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCc-ccCCCCCC-----------EeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.48  E-value=3.3e-14  Score=71.30  Aligned_cols=44  Identities=20%  Similarity=0.237  Sum_probs=38.8

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SG-SSGTGEKP-----------FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCCS-----------BCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CC-CCCCCCCC-----------cccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56 67777777           9999999999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.4e-14  Score=71.78  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=38.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSG-SSGTGERP-----------YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCSCCCS-----------EECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCC-CCCCCCCC-----------cCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.47  E-value=2.2e-14  Score=71.93  Aligned_cols=45  Identities=16%  Similarity=0.109  Sum_probs=38.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSG-SSGTGVKP-----------YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCS-----------EECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccc-cCCCCCCc-----------eECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3e-14  Score=71.43  Aligned_cols=45  Identities=16%  Similarity=0.208  Sum_probs=39.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSG-SSGTGEKP-----------FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSSSCS-----------CCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCC-CCCCCCCC-----------cCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.4e-14  Score=71.82  Aligned_cols=45  Identities=18%  Similarity=0.243  Sum_probs=38.5

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSG-SSGTGKKP-----------YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSCCSS-----------CBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCC-cCCCCCcC-----------eECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            356 67777777           9999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.1e-14  Score=71.37  Aligned_cols=45  Identities=18%  Similarity=0.198  Sum_probs=38.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSG-SSGSGEKP-----------YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCS-----------EECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCc-cccCCCcC-----------eECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.6e-14  Score=71.67  Aligned_cols=45  Identities=18%  Similarity=0.230  Sum_probs=38.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSG-SSGTGEKP-----------YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSCCCSSS-----------EECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             Ccc-cCCCCCCC-----------eECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            356 67777777           9999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.47  E-value=2.4e-14  Score=71.81  Aligned_cols=45  Identities=18%  Similarity=0.232  Sum_probs=38.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSG-SSGMGEKT-----------WKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCC-----------CCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCc-CccCCCcC-----------eECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.47  E-value=6.2e-14  Score=73.38  Aligned_cols=52  Identities=17%  Similarity=0.436  Sum_probs=43.3

Q ss_pred             CeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         50 PQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        50 ~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ||.|+.|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRP-----------YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCC-----------EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCC-----------ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888888 88777   7788 88888888           889889998988888989988887764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.6e-14  Score=71.67  Aligned_cols=45  Identities=20%  Similarity=0.246  Sum_probs=38.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSG-SSGTGEKP-----------YKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCS-SCCCCCCS-----------SEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCC-CCCCCCCC-----------eECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3e-14  Score=71.44  Aligned_cols=45  Identities=16%  Similarity=0.158  Sum_probs=38.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSG-SSGTGEKP-----------HECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCCS-----------CBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCc-cccCCCCC-----------eeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.8e-14  Score=71.54  Aligned_cols=45  Identities=20%  Similarity=0.292  Sum_probs=38.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSG-SSGTGEKP-----------YKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCTTCCCC-----------EECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCC-cCCCCCCC-----------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356 66777777           9999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3e-14  Score=71.41  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=39.2

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSG-SSGTGEKP-----------YKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCSSCCT-----------TCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCC-cCCCCCcC-----------cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466 77777777           9999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.6e-14  Score=71.14  Aligned_cols=45  Identities=16%  Similarity=0.138  Sum_probs=38.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSG-SSGTGEKP-----------CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCCS-----------EECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCc-ccCCCCCC-----------eeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3e-14  Score=71.47  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=38.2

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSG-SSGTGGKH-----------FECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSSSSSCC-----------EECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccc-cccCCCCC-----------eECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356 67777777           9999999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.8e-14  Score=71.55  Aligned_cols=45  Identities=20%  Similarity=0.262  Sum_probs=38.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSG-SSGSGEKP-----------FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CST-TCCCCCCS-----------EEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             Ccc-cCCCCCCC-----------eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.2e-14  Score=70.90  Aligned_cols=44  Identities=20%  Similarity=0.251  Sum_probs=37.9

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SG-SSGTGEKP-----------FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSCCCCCS-----------BCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CC-CCcCCCCC-----------eECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56 66777777           9999999999999999999999999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.46  E-value=3.6e-14  Score=71.12  Aligned_cols=45  Identities=16%  Similarity=0.185  Sum_probs=38.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSG-SSGTGEKP-----------YNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSC-CSCCCCCS-----------EECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCC-CCCCCCcC-----------eECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.5e-14  Score=71.76  Aligned_cols=45  Identities=18%  Similarity=0.211  Sum_probs=39.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSG-SSGTGEKP-----------FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCS-----------EECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCC-CCCCCCCC-----------eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 77777777           9999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.3e-14  Score=71.27  Aligned_cols=45  Identities=18%  Similarity=0.155  Sum_probs=38.2

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSG-SSGSGEKS-----------HTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSS-----------EECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             Ccc-ccCCCCCC-----------eECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466 67777777           9999999999999999999999999999999877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.8e-14  Score=71.58  Aligned_cols=45  Identities=16%  Similarity=0.234  Sum_probs=38.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSG-SSGTGEKP-----------YKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSS-----------EECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcC-cCCCCCCC-----------eECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356 67777777           9999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.7e-14  Score=70.75  Aligned_cols=44  Identities=16%  Similarity=0.129  Sum_probs=38.3

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SG-SSGAGEKP-----------YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCSSCCCS-----------CBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CC-cCcCCCCC-----------cCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55 66777777           9999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.6e-14  Score=70.76  Aligned_cols=44  Identities=20%  Similarity=0.221  Sum_probs=37.9

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~-~~h~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SG-SSGSVEKP-----------YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CC-SCCCCCSS-----------CBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CC-CCCCCCCC-----------eeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55 66666666           9999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.2e-14  Score=70.88  Aligned_cols=44  Identities=18%  Similarity=0.308  Sum_probs=37.8

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SG-SSGTGEKP-----------YKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSSSCCCS-----------EECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CC-CCCCCCcC-----------ccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 66777777           9999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.6e-14  Score=71.13  Aligned_cols=45  Identities=18%  Similarity=0.152  Sum_probs=38.3

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSG-SSGSGEKP-----------YGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CCCCSSCC-----------EEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCC-CccCCCcC-----------eECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            356 66777777           9999999999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.45  E-value=5.9e-14  Score=70.36  Aligned_cols=44  Identities=14%  Similarity=0.107  Sum_probs=37.6

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~-~~h~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SG-SSGAGVNP-----------YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SC-CSSCCCCS-----------EECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CC-CCCCCCCC-----------eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45 66666666           9999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=6.3e-14  Score=70.25  Aligned_cols=44  Identities=20%  Similarity=0.180  Sum_probs=37.9

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SG-SSGSGEKP-----------FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCS-----------EECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CC-CCCCCCCC-----------cCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55 66777777           9999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=6.4e-14  Score=70.22  Aligned_cols=44  Identities=16%  Similarity=0.213  Sum_probs=37.7

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SG-SSGSREKS-----------HQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CS-CCSSCCCC-----------EECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cc-cccCCCCC-----------EEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 66777777           9999999999999999999999999999999877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.2e-14  Score=70.61  Aligned_cols=44  Identities=14%  Similarity=0.191  Sum_probs=38.1

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~-~~h~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SG-SSGTGEKP-----------YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SC-CCCSSCCS-----------SSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CC-cCCCCCCC-----------cCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55 66777777           9999999999999999999999999999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.6e-14  Score=70.43  Aligned_cols=45  Identities=20%  Similarity=0.239  Sum_probs=36.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSG-SSGTGEKP-----------YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSSSCCCS-----------EECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCC-CCCCCCCC-----------eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466 66777777           8888888888888888888888888888888765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=7.4e-14  Score=70.01  Aligned_cols=44  Identities=20%  Similarity=0.215  Sum_probs=37.9

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~-~~h~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SG-SSGSGEKP-----------YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CC-CCCCSCCS-----------EECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CC-CCCCCCCC-----------eECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45 66666666           9999999999999999999999999999999887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=7.8e-14  Score=77.72  Aligned_cols=62  Identities=15%  Similarity=0.124  Sum_probs=52.7

Q ss_pred             ccCCCCCeeCCCCC-CCcch---hhhhhhcccC---CCCcccccCCCCCceeCCCCCcccCChhHHHHHH-HhhcCCcce
Q psy10073         44 FLNSVIPQSCKHCK-NFTSS---DVNLLMEHSE---NCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT-LIHLGDKQF  115 (144)
Q Consensus        44 ~h~~~~~~~C~~C~-~f~~~---~~H~~~~h~~---~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~  115 (144)
                      +|+++++|.|++|+ .|...   ..|+ ++|.+   +++           |.|++|++.|.....|..|+ ..|.++++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALR-----------FPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCC-----------EECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcc-----------cCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36789999999999 99888   8899 88885   778           99999999999999999998 567777665


Q ss_pred             eC
Q psy10073        116 KC  117 (144)
Q Consensus       116 ~C  117 (144)
                      ..
T Consensus        69 ~~   70 (78)
T 2d9h_A           69 PQ   70 (78)
T ss_dssp             CS
T ss_pred             cc
Confidence            43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4.7e-14  Score=70.70  Aligned_cols=44  Identities=16%  Similarity=0.187  Sum_probs=37.9

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~-~~h~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SG-SSGTGEKP-----------YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCS-----------EEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CC-cCCCCCCC-----------eECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56 66777777           9999999999999999999999999999999887

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.43  E-value=4.8e-14  Score=69.28  Aligned_cols=32  Identities=16%  Similarity=0.278  Sum_probs=20.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |.|++|++.|...+.|..|+++|++++||.|+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A           11 YECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             ccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            66666666666666666666666666666653

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=9.7e-14  Score=69.81  Aligned_cols=45  Identities=18%  Similarity=0.234  Sum_probs=38.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHH-hhcCCcceeCCCc
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTL-IHLGDKQFKCCLC  120 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  120 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|++ +|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSG-SSGTGKKP-----------YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCC-CCCCCCCS-----------BCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccc-cccCCCCC-----------EECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            356 66777777           999999999999999999998 8999999999887

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.3e-14  Score=69.10  Aligned_cols=31  Identities=13%  Similarity=0.232  Sum_probs=20.3

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|...+.|..|+++|++++||.|
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A           11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             eECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            6666666666666666666666666666665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=6.5e-14  Score=70.19  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=38.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            47888999999999999999999999999999999999985

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=68.62  Aligned_cols=44  Identities=23%  Similarity=0.246  Sum_probs=36.0

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SG-SSGSGEKP-----------FKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSCCCCCS-----------EECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CC-CCCCCCCC-----------EECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55 66666666           8888888888888888888888888888888764

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.41  E-value=5.8e-14  Score=70.37  Aligned_cols=41  Identities=22%  Similarity=0.304  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.2e-14  Score=70.54  Aligned_cols=41  Identities=20%  Similarity=0.321  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=6e-14  Score=70.32  Aligned_cols=41  Identities=17%  Similarity=0.391  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.41  E-value=5.1e-14  Score=70.60  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=6.6e-14  Score=70.13  Aligned_cols=41  Identities=20%  Similarity=0.258  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|.+|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.41  E-value=5.9e-14  Score=70.36  Aligned_cols=44  Identities=25%  Similarity=0.331  Sum_probs=33.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSG-SSGTGEKP-----------FECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCS-----------EECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCC-CCCCCCCC-----------EECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888887764

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=6.7e-14  Score=70.11  Aligned_cols=44  Identities=16%  Similarity=0.192  Sum_probs=32.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSG-SSGTGEKP-----------YKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCCC-----------EECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             Ccc-CCCCCCCC-----------eeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            355 56666666           778778877877777777777777777777763

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=5.7e-14  Score=69.73  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=19.9

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           13 FKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             EECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             eECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            6666666666666666666666666666655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.9e-14  Score=70.34  Aligned_cols=41  Identities=17%  Similarity=0.141  Sum_probs=38.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=6.2e-14  Score=70.25  Aligned_cols=41  Identities=17%  Similarity=0.285  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.7e-14  Score=70.42  Aligned_cols=41  Identities=17%  Similarity=0.276  Sum_probs=38.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG   42 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCC
Confidence            47788999999999999999999999999999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=7.2e-14  Score=70.01  Aligned_cols=44  Identities=16%  Similarity=0.228  Sum_probs=33.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSG-SSGTGEKP-----------YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCS-----------EECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCC-CCCCCCcC-----------eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456 66666666           888888888888888888888888888888764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=8.1e-14  Score=69.86  Aligned_cols=43  Identities=16%  Similarity=0.231  Sum_probs=31.7

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SG-SSGTGQRP-----------YECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SC-CCCCCSSS-----------EECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Cc-cccCCCcC-----------cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            55 56666666           788888888888778888877777777777763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=7.2e-14  Score=69.29  Aligned_cols=31  Identities=19%  Similarity=0.322  Sum_probs=19.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A           13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             eECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            6666666666666666666666666666655

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8e-14  Score=69.84  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG   42 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.7e-14  Score=70.43  Aligned_cols=43  Identities=14%  Similarity=0.261  Sum_probs=30.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSG-SSGTGEKP-----------YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSC-CCCSSCCS-----------EEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             Ccc-ccCCCCCC-----------eECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355 56666666           77777777777777777777777777777775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=6.5e-14  Score=70.21  Aligned_cols=43  Identities=14%  Similarity=0.230  Sum_probs=31.3

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSG-SSGTGEKP-----------YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCC-CCCCSCCC-----------EECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             Ccc-cccCCCCC-----------EECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            355 56666666           77777777777777777777777777777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=6.6e-14  Score=70.18  Aligned_cols=44  Identities=16%  Similarity=0.159  Sum_probs=32.1

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSG-SSGTGERH-----------YECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSCCCCC-----------EECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             Ccc-cCcCCCCC-----------eECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355 56666666           778888888888778888877777777777763

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.40  E-value=9.6e-14  Score=68.15  Aligned_cols=37  Identities=16%  Similarity=0.253  Sum_probs=19.3

Q ss_pred             HhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ++|++++||.|++|++.|.+.+.|..|+++|++++||
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            3444555555555555555555555555555555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=6.4e-14  Score=70.20  Aligned_cols=41  Identities=17%  Similarity=0.304  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=8.5e-14  Score=69.09  Aligned_cols=40  Identities=23%  Similarity=0.313  Sum_probs=37.6

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.40  E-value=2.3e-13  Score=67.81  Aligned_cols=40  Identities=15%  Similarity=0.110  Sum_probs=35.7

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcc
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS  121 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  121 (144)
                      +++++|.|++|++.|.....|..|+++|+++++|.|+.||
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3344499999999999999999999999999999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.6e-14  Score=69.04  Aligned_cols=38  Identities=24%  Similarity=0.287  Sum_probs=21.0

Q ss_pred             HHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      +++|++++||.|+.|++.|.+.+.|..|+++|++++||
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            34455555555555555555555555555555555555

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.1e-14  Score=69.93  Aligned_cols=31  Identities=16%  Similarity=0.246  Sum_probs=16.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|...+.|..|+++|++++||.|
T Consensus        12 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             BCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             eeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            5555555555555555555555555555544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.40  E-value=6.1e-14  Score=70.27  Aligned_cols=41  Identities=20%  Similarity=0.284  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.4e-14  Score=69.97  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.9e-14  Score=69.87  Aligned_cols=41  Identities=20%  Similarity=0.237  Sum_probs=38.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            46788999999999999999999999999999999999985

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=1.8e-13  Score=69.26  Aligned_cols=41  Identities=20%  Similarity=0.303  Sum_probs=37.2

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            44455999999999999999999999999999999999985

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.1e-14  Score=70.01  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.4e-14  Score=70.24  Aligned_cols=41  Identities=24%  Similarity=0.363  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=69.38  Aligned_cols=43  Identities=19%  Similarity=0.221  Sum_probs=32.0

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~-~~H~~~~~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SG-SSGTGERH-----------YECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CC-CSCSSCCC-----------EECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CC-cccCCCCC-----------CCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            55 66666666           788888888888888888887787777777763

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=4.5e-13  Score=70.79  Aligned_cols=52  Identities=21%  Similarity=0.448  Sum_probs=41.6

Q ss_pred             CCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHH-HhhcCC
Q psy10073         49 IPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT-LIHLGD  112 (144)
Q Consensus        49 ~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  112 (144)
                      +||.|+.|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKP-----------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSCS-----------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhCCCCC-----------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            467888888 88777   7788 78888888           88888888888888888886 567654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=9.4e-14  Score=69.59  Aligned_cols=41  Identities=17%  Similarity=0.283  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=8.3e-14  Score=69.77  Aligned_cols=41  Identities=22%  Similarity=0.363  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.39  E-value=6e-14  Score=70.33  Aligned_cols=41  Identities=22%  Similarity=0.344  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcC
Confidence            47788999999999999999999999999999999999985

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=8.2e-14  Score=69.80  Aligned_cols=41  Identities=22%  Similarity=0.268  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.7e-14  Score=70.14  Aligned_cols=44  Identities=18%  Similarity=0.254  Sum_probs=33.6

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSG-SSGTGEKP-----------YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCS-----------CBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCC-cCCCCCcC-----------eECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888888764

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-13  Score=69.27  Aligned_cols=41  Identities=17%  Similarity=0.212  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCS
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.6e-14  Score=70.16  Aligned_cols=41  Identities=22%  Similarity=0.228  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.8e-14  Score=69.90  Aligned_cols=41  Identities=22%  Similarity=0.362  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.4e-14  Score=70.20  Aligned_cols=44  Identities=16%  Similarity=0.248  Sum_probs=33.3

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSG-SSGTGGKP-----------YQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSSSSCS-----------SSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             Ccc-cccCCCCC-----------eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888887764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.5e-14  Score=69.94  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=33.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSG-SSGTGEKP-----------YECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCS-----------SCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccc-cCCCCCCC-----------cCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            456 66666666           888888888888888888888888888888764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=8.6e-14  Score=69.70  Aligned_cols=44  Identities=20%  Similarity=0.229  Sum_probs=31.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSG-SSGTGEKP-----------FECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSCCCCS-----------EECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCC-CCCCCCCC-----------cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355 56666666           778778887877777777877777777777764

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=8.3e-14  Score=69.75  Aligned_cols=41  Identities=22%  Similarity=0.306  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.4e-14  Score=69.99  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=33.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSG-SSGSGEKP-----------FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCCCCSSS-----------BCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             Ccc-cCCCCCcC-----------CCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            455 66666666           888888888888888888888888888887764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.3e-14  Score=69.98  Aligned_cols=41  Identities=22%  Similarity=0.282  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG   42 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.3e-14  Score=69.96  Aligned_cols=41  Identities=15%  Similarity=0.207  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=9.4e-14  Score=68.96  Aligned_cols=39  Identities=18%  Similarity=0.246  Sum_probs=20.9

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            344455555555555555555555555555555555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=8e-14  Score=69.83  Aligned_cols=41  Identities=17%  Similarity=0.232  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=9.6e-14  Score=69.58  Aligned_cols=42  Identities=19%  Similarity=0.312  Sum_probs=31.3

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SG-SSGSGKKP-----------YECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CC-CSCCCSCS-----------CCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CC-CCcCCCCC-----------cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45 55666666           78888888888888888888778777777775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1e-13  Score=69.44  Aligned_cols=44  Identities=20%  Similarity=0.308  Sum_probs=32.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSG-SSGTGEKP-----------YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSS-SSSSCCCS-----------EECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCC-cCcCCCcC-----------ccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            355 66666666           788888888888888888877777777777764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.5e-14  Score=69.46  Aligned_cols=32  Identities=19%  Similarity=0.293  Sum_probs=21.0

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |.|++|++.|.....|..|+++|++++||.|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             eECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            66666666666666666666666666666653

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=8.1e-14  Score=69.84  Aligned_cols=41  Identities=20%  Similarity=0.233  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=6.9e-14  Score=68.74  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=20.4

Q ss_pred             HHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      +++|++++||.|++|++.|.+.+.|..|+++|++++||
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            34455555555555555555555555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.7e-14  Score=69.68  Aligned_cols=44  Identities=20%  Similarity=0.269  Sum_probs=32.4

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~-~~H~~~~~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSG-SSGTGEKP-----------YRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCC-----------EECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCc-cCCCCCCC-----------eECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355 56666666           788888888888888888887787777777763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.3e-14  Score=69.75  Aligned_cols=44  Identities=23%  Similarity=0.341  Sum_probs=33.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSG-SSGTGEKP-----------YICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-CCCCSCCS-----------EECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCC-CCCCCCcC-----------EECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            355 66666666           888888888888888888888888888887764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.5e-14  Score=69.77  Aligned_cols=44  Identities=16%  Similarity=0.157  Sum_probs=33.1

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSG-SSGMGEKC-----------YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCCCCCCC-----------CBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCc-cccCCCCC-----------eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888887763

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=69.48  Aligned_cols=41  Identities=24%  Similarity=0.325  Sum_probs=38.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999999985

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.38  E-value=1e-13  Score=69.46  Aligned_cols=41  Identities=27%  Similarity=0.421  Sum_probs=38.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|.+|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.1e-13  Score=67.65  Aligned_cols=41  Identities=27%  Similarity=0.392  Sum_probs=37.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788999999999999999999999999999999999985

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.7e-14  Score=70.15  Aligned_cols=41  Identities=22%  Similarity=0.273  Sum_probs=38.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.8e-14  Score=69.69  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=33.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSG-SSGTGENP-----------FICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCC-CCCCSCCS-----------CBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCC-CCCCCCCC-----------EECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888888763

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.2e-13  Score=68.23  Aligned_cols=38  Identities=16%  Similarity=0.128  Sum_probs=33.4

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      ++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33339999999999999999999999999999999887

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.5e-13  Score=73.60  Aligned_cols=57  Identities=23%  Similarity=0.423  Sum_probs=51.5

Q ss_pred             ccccCCCCCeeCC--CCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         42 MSFLNSVIPQSCK--HCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        42 ~~~h~~~~~~~C~--~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ..++.++++|.|+  .|+ .|...   ..|+ ++|.++++           |.|++|++.|.....|..|+++|+
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~-----------~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKP-----------FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHHCCCC-----------EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhCCCCC-----------eECCCCCchhCCHHHHHHHHHhcC
Confidence            4567889999997  599 99888   8999 99999999           999999999999999999998874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.38  E-value=3e-13  Score=67.71  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=37.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.38  E-value=1e-13  Score=69.39  Aligned_cols=41  Identities=17%  Similarity=0.196  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.1e-14  Score=69.82  Aligned_cols=44  Identities=20%  Similarity=0.305  Sum_probs=33.1

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSG-SSGTGEKP-----------YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCSCC-----------CCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             Ccc-cccCCCCC-----------eECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888887763

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1e-13  Score=68.76  Aligned_cols=31  Identities=13%  Similarity=0.286  Sum_probs=18.9

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           13 YECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             EECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            6666666666666666666666666666555

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.3e-13  Score=69.09  Aligned_cols=40  Identities=20%  Similarity=0.254  Sum_probs=38.1

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|.+|+++|++++||+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=7.9e-14  Score=69.88  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=33.0

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSG-SSGTGEKP-----------YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSCCCT-----------TCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCC-cCCCCCcC-----------eECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888887763

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.7e-14  Score=69.02  Aligned_cols=32  Identities=16%  Similarity=0.301  Sum_probs=20.7

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |.|++|++.|.....|..|+++|++++||.|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             eeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            66666666666666666666666666666653

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.8e-13  Score=68.56  Aligned_cols=41  Identities=17%  Similarity=0.087  Sum_probs=38.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=69.26  Aligned_cols=43  Identities=21%  Similarity=0.208  Sum_probs=32.8

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SG-SSGAGKKL-----------FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSCCSSCC-----------CBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CC-CCCCCCCC-----------EECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 56666666           888888888888888888888888888888764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.7e-13  Score=68.67  Aligned_cols=41  Identities=24%  Similarity=0.319  Sum_probs=38.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=9e-14  Score=69.63  Aligned_cols=41  Identities=24%  Similarity=0.327  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.37  E-value=4.2e-13  Score=65.81  Aligned_cols=40  Identities=15%  Similarity=0.297  Sum_probs=37.2

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|+++++|.|++|++.|.+.+.|..|+++|++++||.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5678899999999999999999999999999999999985

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.1e-13  Score=69.28  Aligned_cols=41  Identities=22%  Similarity=0.292  Sum_probs=38.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            46788999999999999999999999999999999999985

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.4e-13  Score=68.95  Aligned_cols=41  Identities=22%  Similarity=0.299  Sum_probs=38.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.7e-13  Score=67.34  Aligned_cols=41  Identities=20%  Similarity=0.336  Sum_probs=37.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            46788999999999999999999999999999999999985

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.7e-13  Score=67.36  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=31.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |.|++|++.|.....|..|+++|++++||.|++|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             eeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            9999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=68.92  Aligned_cols=41  Identities=20%  Similarity=0.343  Sum_probs=38.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|.+|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=67.42  Aligned_cols=41  Identities=22%  Similarity=0.235  Sum_probs=36.3

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            46778889999999999999999999999999999999884

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=8e-14  Score=69.84  Aligned_cols=43  Identities=16%  Similarity=0.111  Sum_probs=30.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSG-SSGTGEKP-----------FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCC-CCSCCCCS-----------EECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccc-cccCCCCC-----------eeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355 56666666           77777777777777777777777777777775

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2e-13  Score=68.36  Aligned_cols=40  Identities=25%  Similarity=0.404  Sum_probs=38.0

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            6778999999999999999999999999999999999985

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=68.82  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=38.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCC
Confidence            36778999999999999999999999999999999999985

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.7e-13  Score=67.36  Aligned_cols=41  Identities=17%  Similarity=0.346  Sum_probs=37.1

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46778999999999999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.2e-13  Score=67.11  Aligned_cols=41  Identities=17%  Similarity=0.345  Sum_probs=36.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46778889999999999999999999999999999999984

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=4.8e-13  Score=66.94  Aligned_cols=41  Identities=17%  Similarity=0.306  Sum_probs=37.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.36  E-value=1.9e-13  Score=68.48  Aligned_cols=40  Identities=20%  Similarity=0.267  Sum_probs=37.9

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            6678999999999999999999999999999999999985

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.1e-13  Score=69.35  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=30.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSG-SSGTGEKP-----------YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCC-CSSCCCCS-----------SEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             Ccc-cCCCCCCC-----------eECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355 56666666           77777777777777777777777777777775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.5e-13  Score=67.44  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=36.1

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            46778888999999999999999999999999999999885

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=7.3e-14  Score=69.33  Aligned_cols=31  Identities=16%  Similarity=0.226  Sum_probs=21.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             EEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             eECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            6666666666666666666666666666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.2e-13  Score=67.14  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=37.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=68.70  Aligned_cols=40  Identities=15%  Similarity=0.238  Sum_probs=38.0

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|.+|+++|++++||+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            6778999999999999999999999999999999999985

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.1e-13  Score=65.18  Aligned_cols=40  Identities=18%  Similarity=0.238  Sum_probs=37.1

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5677899999999999999999999999999999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4e-13  Score=67.20  Aligned_cols=41  Identities=22%  Similarity=0.300  Sum_probs=36.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            46778889999999999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.6e-13  Score=67.02  Aligned_cols=41  Identities=20%  Similarity=0.276  Sum_probs=36.1

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36778888999999999999999999999999999999884

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.4e-13  Score=67.03  Aligned_cols=41  Identities=22%  Similarity=0.367  Sum_probs=37.2

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36778899999999999999999999999999999999985

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.1e-13  Score=67.20  Aligned_cols=41  Identities=22%  Similarity=0.304  Sum_probs=36.2

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            46778888999999999999999999999999999999885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.1e-13  Score=69.35  Aligned_cols=44  Identities=18%  Similarity=0.147  Sum_probs=33.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      .|+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSG-SSGSGERP-----------FKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCC-SCSSCCCS-----------CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCC-cCCCCCCC-----------eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355 66666666           888888888888888888888888888888763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.6e-13  Score=66.68  Aligned_cols=41  Identities=20%  Similarity=0.392  Sum_probs=37.1

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            36778999999999999999999999999999999999985

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=7.3e-14  Score=69.99  Aligned_cols=41  Identities=24%  Similarity=0.339  Sum_probs=38.7

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.5e-13  Score=68.92  Aligned_cols=43  Identities=16%  Similarity=0.293  Sum_probs=32.8

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SG-SSGTGEKP-----------YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CS-SSCSSCCS-----------CBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CC-CCCCCCcc-----------cCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            45 56666666           888888888888888888888888888888764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.5e-13  Score=66.72  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=37.0

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36778899999999999999999999999999999999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.9e-13  Score=67.25  Aligned_cols=41  Identities=22%  Similarity=0.246  Sum_probs=36.3

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            36778889999999999999999999999999999999884

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5e-13  Score=66.89  Aligned_cols=41  Identities=24%  Similarity=0.373  Sum_probs=36.1

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36778888999999999999999999999999999999885

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.8e-13  Score=66.89  Aligned_cols=41  Identities=22%  Similarity=0.329  Sum_probs=37.0

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            46778899999999999999999999999999999999985

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=68.70  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=38.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.7e-13  Score=67.24  Aligned_cols=32  Identities=19%  Similarity=0.253  Sum_probs=21.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |.|++|++.|.....|..|+++|++++||.|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           13 SECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            66666666666666666666666666666663

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.3e-13  Score=65.80  Aligned_cols=41  Identities=17%  Similarity=0.304  Sum_probs=38.2

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5e-13  Score=66.88  Aligned_cols=41  Identities=20%  Similarity=0.263  Sum_probs=36.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46778889999999999999999999999999999999884

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3e-13  Score=67.72  Aligned_cols=40  Identities=25%  Similarity=0.478  Sum_probs=37.8

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            5678999999999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.1e-13  Score=66.87  Aligned_cols=41  Identities=15%  Similarity=0.334  Sum_probs=37.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=6.8e-13  Score=65.72  Aligned_cols=41  Identities=20%  Similarity=0.272  Sum_probs=38.0

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.9e-13  Score=66.61  Aligned_cols=41  Identities=20%  Similarity=0.373  Sum_probs=37.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.1e-13  Score=68.32  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=26.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |.|++|++.|.....|..|+++|++++||.|+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A           13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            88888888888888888888888888888775

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.34  E-value=9e-14  Score=74.25  Aligned_cols=52  Identities=15%  Similarity=0.324  Sum_probs=40.1

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHH
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKL  130 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  130 (144)
                      .|+ ++|.+++|           |.|++|++.|.....|.   ++|++++||.|+.|++.|....++
T Consensus         4 ~h~-~~H~~~k~-----------~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDE-RDSTNRAS-----------FKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCS-SSCCSSSE-----------EECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHH-HHcCCCCC-----------ccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            355 56666666           88888888888877775   778888888898888888876554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.9e-13  Score=65.89  Aligned_cols=41  Identities=17%  Similarity=0.223  Sum_probs=37.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            46778999999999999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.9e-13  Score=65.95  Aligned_cols=40  Identities=18%  Similarity=0.239  Sum_probs=36.0

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|.+|+++|++++||+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6778889999999999999999999999999999999885

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.6e-13  Score=67.96  Aligned_cols=42  Identities=19%  Similarity=0.167  Sum_probs=31.1

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcC-CcceeCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG-DKQFKCC  118 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  118 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SG-SSGQKEKC-----------FKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CC-CCCCCSCC-----------EECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             Cc-cccCCCCC-----------EECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 56666666           7888888888888888888777777 7777775

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.4e-13  Score=66.51  Aligned_cols=40  Identities=18%  Similarity=0.275  Sum_probs=34.1

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+...|.+|+++|++++||+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            5667888888889889999988888888988888888874

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.4e-13  Score=67.72  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=38.4

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHH-hhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVK-NKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|++ +|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            36788999999999999999999999999999 999999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=6.1e-13  Score=65.91  Aligned_cols=41  Identities=15%  Similarity=0.201  Sum_probs=37.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|+.|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            47788999999999999999999999999999999999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.7e-13  Score=65.29  Aligned_cols=40  Identities=20%  Similarity=0.337  Sum_probs=37.1

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            6778999999999999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.7e-13  Score=66.42  Aligned_cols=41  Identities=22%  Similarity=0.366  Sum_probs=36.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|.+++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36778899999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7e-13  Score=65.65  Aligned_cols=41  Identities=20%  Similarity=0.375  Sum_probs=37.5

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.32  E-value=1.3e-12  Score=63.91  Aligned_cols=41  Identities=10%  Similarity=0.105  Sum_probs=36.3

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~-~~H~~~~~-----------~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SS-GSSGGETP-----------YLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CC-SCCCSSCC-----------EECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CC-ccCCCCCC-----------eECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            44 56666666           9999999999999999999999999999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=2.2e-12  Score=63.61  Aligned_cols=38  Identities=24%  Similarity=0.266  Sum_probs=28.5

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      +++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            6 SGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            33334888888888888888888888888888887763

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1e-12  Score=65.71  Aligned_cols=40  Identities=20%  Similarity=0.160  Sum_probs=35.8

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcC-CCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS-TKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+.+.|..|+++|++ ++||+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            67788899999999999999999999999999999 89884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=9.9e-13  Score=64.12  Aligned_cols=31  Identities=19%  Similarity=0.278  Sum_probs=15.5

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |.|++|++.|.....|..|+++|++++||.|
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A           11 YECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             EECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             eECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5555555555555555555555554444444

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.3e-13  Score=65.83  Aligned_cols=41  Identities=17%  Similarity=0.268  Sum_probs=36.9

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            46778899999999999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1e-12  Score=64.39  Aligned_cols=41  Identities=22%  Similarity=0.375  Sum_probs=36.5

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |+ ++|.++++           |.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SS-GSSGGEKP-----------YKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSSCS-----------EECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CC-cccCCCCC-----------EeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45 66777777           9999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.1e-13  Score=66.08  Aligned_cols=41  Identities=20%  Similarity=0.276  Sum_probs=37.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.9e-12  Score=64.10  Aligned_cols=40  Identities=10%  Similarity=-0.041  Sum_probs=36.8

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            5677889999999999999999999999999999999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.4e-12  Score=65.17  Aligned_cols=40  Identities=18%  Similarity=0.309  Sum_probs=34.4

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5567888889999999999999999999999999888884

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.8e-13  Score=65.31  Aligned_cols=41  Identities=15%  Similarity=0.121  Sum_probs=37.8

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788999999999999999999999999999999999985

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.29  E-value=2.4e-12  Score=62.06  Aligned_cols=35  Identities=11%  Similarity=0.329  Sum_probs=23.6

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      |++++||.|++|++.|.+.+.|..|+++|++++||
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            34566677777777777777777777777777666

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3.1e-12  Score=63.92  Aligned_cols=33  Identities=27%  Similarity=0.440  Sum_probs=27.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      |.|++|++.|.....|..|+++|++++||.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             cCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            888888888888888888888888888888863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.1e-12  Score=64.23  Aligned_cols=41  Identities=20%  Similarity=0.257  Sum_probs=35.8

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      |+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SS-GSSGGEKP-----------YPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CC-SCCSSSCC-----------BCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CC-cccCCCCC-----------EECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45 66666666           9999999999999999999999999999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.28  E-value=2.3e-12  Score=63.52  Aligned_cols=38  Identities=24%  Similarity=0.301  Sum_probs=35.6

Q ss_pred             HhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++|+++++|.|+.|++.|.+.+.|..|+++|++++||+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            35789999999999999999999999999999999985

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.5e-12  Score=65.14  Aligned_cols=39  Identities=15%  Similarity=0.191  Sum_probs=36.5

Q ss_pred             HHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            456889999999999999999999999999999999985

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.9e-12  Score=69.79  Aligned_cols=55  Identities=16%  Similarity=0.328  Sum_probs=44.6

Q ss_pred             CCCCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCC-CCCcccCChhHHHHHHHhhcCCcc
Q psy10073         46 NSVIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICV-ACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        46 ~~~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      .+++||.|+.|+ .|. .   ..|+ ++ .+++|           |.|+ +|++.|...+.|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p-----------~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLP-----------VACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHH-HH-CSSSE-----------EECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHH-HH-cCCcC-----------ccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            467788888888 888 5   7788 67 77888           8898 899988888889999888876554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.2e-12  Score=62.26  Aligned_cols=38  Identities=18%  Similarity=0.296  Sum_probs=35.5

Q ss_pred             HhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      ++|++++||.|++|++.|.+.+.|..|+++|++++||+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            35789999999999999999999999999999999985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=65.42  Aligned_cols=33  Identities=27%  Similarity=0.362  Sum_probs=25.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCL  119 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  119 (144)
                      |.|++|++.|.....|..|+++|++++||.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A           13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             ccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            777777777777777777777777777777753

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.5e-12  Score=64.24  Aligned_cols=34  Identities=24%  Similarity=0.321  Sum_probs=30.7

Q ss_pred             eeCC--CCCcccCChhHHHHHHHhhcCCcceeCCCc
Q psy10073         87 FICV--ACDYFTIISQNMRNHTLIHLGDKQFKCCLC  120 (144)
Q Consensus        87 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  120 (144)
                      |.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus        13 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             eECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            9997  899999999999999999999999999887

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.5e-12  Score=61.99  Aligned_cols=36  Identities=14%  Similarity=0.338  Sum_probs=27.7

Q ss_pred             HhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073        107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      ++|++++||.|+.|++.|.+.+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            356777788888888888888888888888877775

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.1e-12  Score=62.87  Aligned_cols=43  Identities=19%  Similarity=0.153  Sum_probs=37.9

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      .|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~-~~H~~~k~-----------~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSG-SSGSGEKP-----------YECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCC-CCCCCCCS-----------EECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCC-cccCCCcC-----------eECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            466 77777777           99999999999999999999999999999873

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=64.90  Aligned_cols=39  Identities=21%  Similarity=0.315  Sum_probs=36.5

Q ss_pred             HHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCS
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCC
Confidence            457889999999999999999999999999999999985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=63.43  Aligned_cols=39  Identities=23%  Similarity=0.300  Sum_probs=35.3

Q ss_pred             HHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      .++|+++++|.|++|++.|.+...|..|+++|++++||+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            356888999999999999999999999999999999985

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.25  E-value=5.1e-12  Score=59.23  Aligned_cols=34  Identities=21%  Similarity=0.444  Sum_probs=26.9

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      |+++++|.|+.|++.|.+.+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5677788888888888888888888888887775

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.7e-12  Score=71.86  Aligned_cols=64  Identities=14%  Similarity=0.150  Sum_probs=53.5

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      ..|+ .++.+.++           +.|+.|++.|. ...|..|+ .+.+++|+.|+.|++.|. ...|..|++++.+++
T Consensus         6 ~~H~-~~~c~~r~-----------~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            6 SGHE-ETECPLRL-----------AVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             SCCC-CCCCCCCC-----------EECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HhhC-cccCCCcc-----------cCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4455 66667777           99999999994 88999999 889999999999999877 589999999988764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=2.3e-12  Score=74.22  Aligned_cols=67  Identities=18%  Similarity=0.161  Sum_probs=51.3

Q ss_pred             CCCeeCCCCC-CCcch---hhhhhhc-ccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         48 VIPQSCKHCK-NFTSS---DVNLLME-HSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        48 ~~~~~C~~C~-~f~~~---~~H~~~~-h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      ...|.|+.|+ .|...   ..|+ ++ |.++++...   ..-..|.|++|++.|.....|..|+++|++++||.|+
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~-~~~H~~~~~~~~---~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNN---HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHH-HHTTTCCTTCSC---CCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHH-HHhccCCCCCCc---cceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3457788999 88877   7888 66 776654110   0011278999999999999999999999999999996

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.23  E-value=6.9e-12  Score=58.83  Aligned_cols=34  Identities=24%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      |++++||.|++|++.|.+.+.|.+|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5677788888888888888888888888877765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=64.67  Aligned_cols=39  Identities=18%  Similarity=0.244  Sum_probs=36.4

Q ss_pred             HHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        106 TLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       106 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +++|+++++|.|++|++.|.+.+.|..|+++|++++||+
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            356889999999999999999999999999999999985

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.22  E-value=3.3e-12  Score=60.74  Aligned_cols=36  Identities=25%  Similarity=0.322  Sum_probs=26.5

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            556677777777777777777777777777777664

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=6.3e-12  Score=65.02  Aligned_cols=42  Identities=17%  Similarity=0.197  Sum_probs=24.3

Q ss_pred             CCceecCccCCccCCccccccccCCCCCCcc-ccCCCCCeeCCCCC-CCcc
Q psy10073         13 STKKTCLYCNKYVPSDIDVFIGHCQTCPNMS-FLNSVIPQSCKHCK-NFTS   61 (144)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~-~h~~~~~~~C~~C~-~f~~   61 (144)
                      .++|.|++|++.|.....|.+       |++ +|.+++||.|++|+ .|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~-------H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNG-------HIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHH-------HHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHH-------HHHHhcCCCCCccCCCCCCCCCC
Confidence            345666666666666666666       444 55566666666666 5543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.18  E-value=4.8e-12  Score=67.39  Aligned_cols=50  Identities=16%  Similarity=0.248  Sum_probs=42.4

Q ss_pred             CccccCCCCCeeCCCCC-CCcchhhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHH
Q psy10073         41 NMSFLNSVIPQSCKHCK-NFTSSDVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNM  102 (144)
Q Consensus        41 h~~~h~~~~~~~C~~C~-~f~~~~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l  102 (144)
                      |+++|.+++||.|+.|| .|....... ++|.++++           |.|++|++.|....++
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~-~~H~~~k~-----------~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ-LFDPMTGT-----------FRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH-HEETTTTE-----------EBCSSSCCBCEECTTC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH-hhcCCCCC-----------EECCCCCCccccCccc
Confidence            78899999999999999 998774444 78888888           9999999999877654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.3e-11  Score=61.27  Aligned_cols=37  Identities=22%  Similarity=0.543  Sum_probs=35.1

Q ss_pred             hhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      +|++++||.|++|++.|...+.|..|+++|++++||.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~   40 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKS   40 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCC
Confidence            5789999999999999999999999999999999984

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=2e-11  Score=58.29  Aligned_cols=36  Identities=22%  Similarity=0.287  Sum_probs=29.5

Q ss_pred             hcCCcceeCC--CcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        109 HLGDKQFKCC--LCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       109 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |++++||.|.  .|++.|.+.+.|.+|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4677888888  58888888888888888888888873

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=56.64  Aligned_cols=31  Identities=16%  Similarity=0.278  Sum_probs=21.2

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      +||.|++|++.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3566777777777777777777777776665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.8e-12  Score=62.53  Aligned_cols=40  Identities=20%  Similarity=0.375  Sum_probs=36.8

Q ss_pred             HHHhhcCCcceeCC--CcchhccChHHHHHHHHhhcCCCCCC
Q psy10073        105 HTLIHLGDKQFKCC--LCSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       105 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |.++|+++++|.|.  .|++.|.+.+.|..|+++|++++||+
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            44678999999998  89999999999999999999999985

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=2.3e-11  Score=65.17  Aligned_cols=37  Identities=24%  Similarity=0.239  Sum_probs=24.2

Q ss_pred             CCCCceeCCC--CCcccCChhHHHHHH-HhhcCCcceeCC
Q psy10073         82 PVKYKFICVA--CDYFTIISQNMRNHT-LIHLGDKQFKCC  118 (144)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~  118 (144)
                      ++++||.|..  |+++|...++|..|+ ++|++++|+.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3344477754  777777777777775 467777777664

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.15  E-value=4e-11  Score=65.48  Aligned_cols=56  Identities=21%  Similarity=0.408  Sum_probs=47.0

Q ss_pred             ccccCCCCCeeCCC--CC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCC--CCcccCChhHHHHHHHhh
Q psy10073         42 MSFLNSVIPQSCKH--CK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVA--CDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        42 ~~~h~~~~~~~C~~--C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  109 (144)
                      .......++|.|+.  |+ .|...   ..|+ ++|.++++           |.|.+  |++.|.....|..|+++|
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~-----------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKP-----------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCS-----------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHH-HhcCCCCC-----------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44556778899988  99 88887   8898 89999888           99965  999999999999998765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.14  E-value=3.2e-11  Score=62.28  Aligned_cols=42  Identities=19%  Similarity=0.162  Sum_probs=36.2

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCCccee
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFK  116 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  116 (144)
                      ..|+ ++|.++++           |.|++|++.|...+.|..|+++|++++||.
T Consensus        13 ~~h~-~~H~~~k~-----------~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           13 EKPR-SRSQSEQP-----------ATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCH-HHHTSSCC-----------EECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             hhHH-HhcCCCCC-----------ccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            6677 78888888           999999999999999999999999988873

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.8e-11  Score=57.10  Aligned_cols=32  Identities=31%  Similarity=0.430  Sum_probs=23.6

Q ss_pred             hcCCcceeCCC--cchhccChHHHHHHHHhhcCC
Q psy10073        109 HLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       109 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +++++||+|+.  |+++|.+.+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677777765  777777777777777777765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=1.7e-12  Score=74.02  Aligned_cols=49  Identities=18%  Similarity=0.236  Sum_probs=41.5

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      |.|++|++.|.....|..|+++|++++||.|..|.    ....|..|+++|.+
T Consensus        26 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           26 YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            99999999999999999999999999999998764    45566677777776

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=1.7e-11  Score=61.73  Aligned_cols=40  Identities=13%  Similarity=0.084  Sum_probs=29.7

Q ss_pred             CCCCceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC
Q psy10073         11 PLSTKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK   57 (144)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~   57 (144)
                      ...++|.|++|++.|.....|.+       |+++|.+++||.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~-------H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNR-------HKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHH-------HGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHH-------HHHhcCCCCCccCCCCC
Confidence            34556777777777777777777       67777777777777775

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=7.4e-11  Score=55.50  Aligned_cols=34  Identities=29%  Similarity=0.552  Sum_probs=23.1

Q ss_pred             hhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +|.+++||.|++|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3556667777777777777777777777776653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.8e-11  Score=56.59  Aligned_cols=34  Identities=21%  Similarity=0.373  Sum_probs=22.5

Q ss_pred             hhcCCcceeCCCcchhccCh-HHHHHHHHhhcCCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQK-EKLQFHVKNKHSTK  141 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~k  141 (144)
                      +|++++||.|+.|++.|.+. +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            45566667777777777766 67777776666653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.08  E-value=8.5e-11  Score=56.42  Aligned_cols=36  Identities=17%  Similarity=0.161  Sum_probs=32.0

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeC
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKC  117 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  117 (144)
                      +++++|.|++|++.|...+.|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            344459999999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.1e-11  Score=55.86  Aligned_cols=33  Identities=9%  Similarity=0.113  Sum_probs=23.1

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      |++++||.|.+|++.|.+.+.|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            556677777777777777777777777776653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1e-10  Score=55.09  Aligned_cols=34  Identities=32%  Similarity=0.629  Sum_probs=22.8

Q ss_pred             hhcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      .|++++||.|++|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            3556667777777777777777777777766653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=5e-11  Score=56.61  Aligned_cols=33  Identities=18%  Similarity=0.433  Sum_probs=24.0

Q ss_pred             hhcCCcceeCCCcchhccChHHHHHH-HHhhcCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQKEKLQFH-VKNKHST  140 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  140 (144)
                      +|++++||.|+.|++.|.+.+.|..| +++|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            46677777777777777777777777 6777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.3e-10  Score=54.66  Aligned_cols=33  Identities=18%  Similarity=0.187  Sum_probs=21.7

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      |.++++|.|++|++.|.+...|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            455666666666666666666666666666653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.2e-10  Score=53.89  Aligned_cols=33  Identities=27%  Similarity=0.345  Sum_probs=23.4

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      |.+++||.|+.|++.|...+.|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            456677777777777777777777777777654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.03  E-value=1.4e-10  Score=58.45  Aligned_cols=32  Identities=19%  Similarity=0.414  Sum_probs=16.0

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHH-hhcCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVK-NKHST  140 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  140 (144)
                      |++++||.|.+|++.|.+...|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            444555555555555555555555555 45443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.00  E-value=4.7e-10  Score=52.25  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=29.2

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCcc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      |+++++|.|++|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            3444459999999999999999999999998865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.99  E-value=5.3e-10  Score=52.12  Aligned_cols=34  Identities=21%  Similarity=0.278  Sum_probs=29.3

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCcc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      |+++++|.|.+|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            3444559999999999999999999999998875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.3e-10  Score=53.55  Aligned_cols=33  Identities=9%  Similarity=0.194  Sum_probs=28.6

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcc
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      +++++|.|++|++.|.....|..|+++|++++|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            334449999999999999999999999998875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.98  E-value=1.5e-11  Score=56.62  Aligned_cols=31  Identities=19%  Similarity=0.317  Sum_probs=24.5

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      +||.|+.|++.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4677888888888888888888888888776

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=5.4e-10  Score=59.89  Aligned_cols=35  Identities=14%  Similarity=0.207  Sum_probs=31.9

Q ss_pred             hcCCcceeCCC--cchhccChHHHHHHH-HhhcCCCCC
Q psy10073        109 HLGDKQFKCCL--CSYGAYQKEKLQFHV-KNKHSTKVK  143 (144)
Q Consensus       109 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~kp~  143 (144)
                      .++++||+|..  |+++|.+.+.|.+|+ ++|+++|||
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            56899999975  999999999999997 689999997

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.97  E-value=4e-10  Score=53.38  Aligned_cols=33  Identities=18%  Similarity=0.271  Sum_probs=23.4

Q ss_pred             hcCCcceeCCC--cchhccChHHHHHHHHhhcCCC
Q psy10073        109 HLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       109 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      |++++||.|.+  |++.|.+.+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45667777763  7777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.97  E-value=5.6e-11  Score=59.61  Aligned_cols=38  Identities=16%  Similarity=0.403  Sum_probs=30.5

Q ss_pred             HHHHhhcCCcceeCC--CcchhccChHHHHHHHHhhcCCC
Q psy10073        104 NHTLIHLGDKQFKCC--LCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      .|...|++++||.|+  .|++.|.+.+.|..|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445568888888885  68888888888888888888875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.96  E-value=5.2e-10  Score=51.61  Aligned_cols=31  Identities=23%  Similarity=0.338  Sum_probs=29.3

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCccee
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFK  116 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  116 (144)
                      +|.|++|++.|...+.|..|+++|++++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4999999999999999999999999999885

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.94  E-value=6.2e-10  Score=52.56  Aligned_cols=36  Identities=22%  Similarity=0.239  Sum_probs=30.8

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      |+ ++|.+++|           |.|++|++.|.....|..|+++|+++
T Consensus         2 H~-~~h~~~k~-----------~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 ST-RGSTGIKP-----------FQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CS-STTCCSSS-----------BCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CC-CcCCCCCC-----------ccCCCCCcccCcHHHHHHHHHHhccC
Confidence            55 66777777           99999999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.7e-10  Score=62.85  Aligned_cols=64  Identities=9%  Similarity=0.164  Sum_probs=54.4

Q ss_pred             cccccccCCCCCCccccCCCCCeeCCCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHH
Q psy10073         29 IDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH  105 (144)
Q Consensus        29 ~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  105 (144)
                      .+|..       |+.++.+++++.|+.|+ .|...  ..|+  .+.++++           +.|+.|++.|. ...|..|
T Consensus         3 ~~L~~-------H~~~~c~~r~~~C~~C~~~~~~~~L~~H~--~~c~~~~-----------~~C~~C~~~~~-~~~l~~H   61 (75)
T 2d9k_A            3 SGSSG-------HEETECPLRLAVCQHCDLELSILKLKEHE--DYCGART-----------ELCGNCGRNVL-VKDLKTH   61 (75)
T ss_dssp             CCCSC-------CCCCCCCCCCEECSSSCCEECHHHHHHHH--HHHHHCE-----------EECSSSCCEEE-TTGGGTH
T ss_pred             hHHHh-------hCcccCCCcccCCcccChHhhHHHHHHHH--hHcCCCc-----------eEcccCCCcCc-HHHHHHH
Confidence            56777       88899999999999999 88755  7786  5788888           99999999887 4889999


Q ss_pred             HHhhcCCc
Q psy10073        106 TLIHLGDK  113 (144)
Q Consensus       106 ~~~h~~~~  113 (144)
                      +.++.+++
T Consensus        62 ~~~c~~~~   69 (75)
T 2d9k_A           62 PEVCGREG   69 (75)
T ss_dssp             HHHBTTBS
T ss_pred             HHHccCCc
Confidence            99988754

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.92  E-value=9.7e-10  Score=49.12  Aligned_cols=29  Identities=17%  Similarity=0.385  Sum_probs=20.2

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|..|++.|.+.+.|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            56777777777777777777777776653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.9e-09  Score=50.87  Aligned_cols=33  Identities=21%  Similarity=0.503  Sum_probs=28.0

Q ss_pred             CCCCCceeCCCCCcccCCh-hHHHHHHHhhcCCc
Q psy10073         81 DPVKYKFICVACDYFTIIS-QNMRNHTLIHLGDK  113 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  113 (144)
                      |+++++|.|++|++.|... +.|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3444449999999999999 99999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.88  E-value=1.1e-09  Score=48.63  Aligned_cols=27  Identities=19%  Similarity=0.456  Sum_probs=17.0

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      ||.|+.|++.|.+.+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.7e-09  Score=49.92  Aligned_cols=33  Identities=27%  Similarity=0.532  Sum_probs=28.0

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      |+++++|.|++|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            344444999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.8e-09  Score=49.90  Aligned_cols=33  Identities=27%  Similarity=0.465  Sum_probs=28.0

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      |+++++|.|++|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            344444999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.3e-09  Score=50.21  Aligned_cols=33  Identities=15%  Similarity=0.190  Sum_probs=28.0

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      |+++++|.|.+|++.|...+.|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            344445999999999999999999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.86  E-value=1.7e-09  Score=47.98  Aligned_cols=28  Identities=25%  Similarity=0.540  Sum_probs=18.2

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      ||.|+.|++.|.+.+.|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            5666666666666666666666666553

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.86  E-value=1.4e-09  Score=48.61  Aligned_cols=29  Identities=28%  Similarity=0.684  Sum_probs=19.1

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      ||.|+.|++.|.+.+.|..|+++|++++|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            56666666666666666666666666554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.8e-09  Score=51.20  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=29.4

Q ss_pred             CCCceeCC--CCCcccCChhHHHHHHHhhcCCcce
Q psy10073         83 VKYKFICV--ACDYFTIISQNMRNHTLIHLGDKQF  115 (144)
Q Consensus        83 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  115 (144)
                      ++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            44459999  5999999999999999999999886

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=3.3e-09  Score=50.57  Aligned_cols=31  Identities=23%  Similarity=0.357  Sum_probs=27.0

Q ss_pred             CCCCceeCCC--CCcccCChhHHHHHHHhhcCC
Q psy10073         82 PVKYKFICVA--CDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      ++++||.|++  |++.|...+.|..|+++|+++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3445599986  999999999999999999975

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.84  E-value=2e-09  Score=47.66  Aligned_cols=28  Identities=21%  Similarity=0.360  Sum_probs=18.4

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      ||.|+.|++.|.+...|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5666666666666666666666666653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.84  E-value=2.2e-09  Score=48.85  Aligned_cols=29  Identities=17%  Similarity=0.355  Sum_probs=19.7

Q ss_pred             cceeCC--CcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCC--LCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|+  .|++.|.+.+.|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            566676  67777777777777777776653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=4e-09  Score=49.28  Aligned_cols=33  Identities=18%  Similarity=0.353  Sum_probs=28.4

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ++++++|.|++|++.|.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            344455999999999999999999999998864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=4.1e-11  Score=68.24  Aligned_cols=39  Identities=15%  Similarity=0.227  Sum_probs=35.6

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      +.++|++++||.|+.|++.|.+.+.|..|+++|++++||
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~   54 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQK   54 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCc
Confidence            345689999999999999999999999999999998876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=2.8e-09  Score=57.15  Aligned_cols=39  Identities=13%  Similarity=0.096  Sum_probs=28.8

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcc
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCS  121 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  121 (144)
                      .++++|.|.+|++.|.....|..|+++|+++. ..+.+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            34445899999999999999999988888754 3455444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.81  E-value=2.5e-09  Score=48.36  Aligned_cols=29  Identities=24%  Similarity=0.507  Sum_probs=19.0

Q ss_pred             cceeCC--CcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCC--LCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|+  .|++.|.+.+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            356665  67777777777777776666653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.79  E-value=2.2e-09  Score=47.48  Aligned_cols=27  Identities=26%  Similarity=0.351  Sum_probs=16.3

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      ||.|+.|++.|.+.+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            555666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.79  E-value=2.9e-09  Score=46.87  Aligned_cols=27  Identities=15%  Similarity=0.465  Sum_probs=17.2

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +||.|+.|++.|.+.+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            456666666666666666666666553

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=6.8e-09  Score=48.55  Aligned_cols=32  Identities=22%  Similarity=0.418  Sum_probs=27.7

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      .++++|.|++|++.|.....|..|+++|++++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            34445999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.78  E-value=3.9e-09  Score=46.08  Aligned_cols=25  Identities=24%  Similarity=0.570  Sum_probs=16.5

Q ss_pred             cceeCCCcchhccChHHHHHHHHhh
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      +||.|+.|++.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5666666666666666666666665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=6.6e-10  Score=49.48  Aligned_cols=29  Identities=28%  Similarity=0.496  Sum_probs=19.7

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|+.|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            35677777777777777777777776653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=6.9e-10  Score=49.72  Aligned_cols=29  Identities=28%  Similarity=0.403  Sum_probs=20.4

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|+.|++.|.+.+.|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            56777777777777777777777776653

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.76  E-value=3.1e-09  Score=46.53  Aligned_cols=25  Identities=24%  Similarity=0.606  Sum_probs=16.9

Q ss_pred             cceeCCCcchhccChHHHHHHHHhh
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      +||.|+.|++.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5666666777776666666666665

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.74  E-value=7.3e-09  Score=51.92  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=27.1

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHH-hhcCCcc
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTL-IHLGDKQ  114 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  114 (144)
                      |+++++|.|.+|++.|.....|..|++ +|+++.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            344445999999999999999999999 9988654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.4e-09  Score=49.05  Aligned_cols=32  Identities=19%  Similarity=0.393  Sum_probs=26.9

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHH-HHhhcCC
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNH-TLIHLGD  112 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  112 (144)
                      |+++++|.|++|++.|...+.|..| +++|+++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3344449999999999999999999 8889864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.72  E-value=5.1e-09  Score=45.60  Aligned_cols=26  Identities=27%  Similarity=0.533  Sum_probs=15.8

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      ||.|+.|++.|.+.+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.70  E-value=9.6e-09  Score=48.30  Aligned_cols=23  Identities=17%  Similarity=0.519  Sum_probs=16.1

Q ss_pred             CCceeCCCCCcccCChhHHHHHH
Q psy10073         84 KYKFICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~  106 (144)
                      +++|.|++|+++|.+.++|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            33477777777777777777776

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.69  E-value=5.4e-09  Score=46.67  Aligned_cols=27  Identities=22%  Similarity=0.431  Sum_probs=16.4

Q ss_pred             ceeCCCcchhccChHHHHHH-HHhhcCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFH-VKNKHST  140 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  140 (144)
                      ||.|+.|++.|.+.+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            55666666666666666666 4556554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.67  E-value=2e-08  Score=47.27  Aligned_cols=32  Identities=25%  Similarity=0.423  Sum_probs=27.2

Q ss_pred             CCCCceeCCC--CCcccCChhHHHHHHHhhcCCc
Q psy10073         82 PVKYKFICVA--CDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +++++|.|.+  |++.|...+.|..|+++|++++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            3444499984  9999999999999999999864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.66  E-value=3.9e-09  Score=48.19  Aligned_cols=31  Identities=13%  Similarity=0.061  Sum_probs=28.1

Q ss_pred             CceecCccCCccCCccccccccCCCCCCccccCCCCCe
Q psy10073         14 TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQ   51 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~   51 (144)
                      ++|.|+.||+.|...++|..       |+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~-------H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSK-------HIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSS-------STTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHH-------HHHHHccCCCC
Confidence            47899999999999999999       89999998886

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.66  E-value=2.1e-08  Score=44.25  Aligned_cols=28  Identities=32%  Similarity=0.547  Sum_probs=25.8

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +|.|++|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            4999999999999999999999998764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=2.3e-08  Score=44.38  Aligned_cols=29  Identities=21%  Similarity=0.171  Sum_probs=26.2

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            34999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.65  E-value=1.4e-08  Score=47.73  Aligned_cols=31  Identities=23%  Similarity=0.292  Sum_probs=26.6

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +.+++||.|+.|+++|++.+.|.+|+..+-+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYYCS   33 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHTST
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeECc
Confidence            4689999999999999999999999854433

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.62  E-value=3.4e-08  Score=43.51  Aligned_cols=28  Identities=21%  Similarity=0.500  Sum_probs=25.7

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +|.|++|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            4999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.62  E-value=2.9e-08  Score=43.69  Aligned_cols=28  Identities=32%  Similarity=0.548  Sum_probs=25.8

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +|.|++|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            4999999999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.60  E-value=2.1e-08  Score=49.88  Aligned_cols=39  Identities=23%  Similarity=0.371  Sum_probs=32.6

Q ss_pred             hhhhhhcccCCCCcccccCCCCCceeCC--CCCcccCChhHHHHHHHhhcCCc
Q psy10073         63 DVNLLMEHSENCPCMVRPDPVKYKFICV--ACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        63 ~~H~~~~h~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ..|. ..|.+++|           |.|+  .|++.|...+.|..|+++|++++
T Consensus         7 ~~~~-~~H~~~k~-----------~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKY-VKEMPDKT-----------FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGS-CEEETTTE-----------EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHH-hccCCCCC-----------eECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4455 66778887           9995  79999999999999999998864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=5.4e-09  Score=45.18  Aligned_cols=25  Identities=24%  Similarity=0.493  Sum_probs=16.0

Q ss_pred             cceeCCCcchhccChHHHHHHHHhh
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      +||.|+.|++.|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666666655

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.59  E-value=4.4e-08  Score=43.42  Aligned_cols=29  Identities=17%  Similarity=0.476  Sum_probs=26.3

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      +|.|++|++.|...+.|..|+++|+++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            49999999999999999999999988753

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.56  E-value=4.5e-08  Score=43.01  Aligned_cols=28  Identities=29%  Similarity=0.457  Sum_probs=25.7

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +|.|++|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            4999999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.56  E-value=6.6e-08  Score=43.72  Aligned_cols=29  Identities=17%  Similarity=0.360  Sum_probs=26.1

Q ss_pred             CceeCC--CCCcccCChhHHHHHHHhhcCCc
Q psy10073         85 YKFICV--ACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        85 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ++|.|.  .|++.|...+.|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            349999  89999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=6.6e-08  Score=51.75  Aligned_cols=33  Identities=18%  Similarity=0.216  Sum_probs=29.5

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +.+++||.|..|++.|.+.+.|.+|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            567899999999999999999999999999865

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.55  E-value=5.6e-08  Score=43.67  Aligned_cols=28  Identities=29%  Similarity=0.577  Sum_probs=25.6

Q ss_pred             ceeCC--CCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICV--ACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +|.|+  .|++.|...+.|..|+++|++++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            49998  99999999999999999998864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=5.7e-08  Score=42.49  Aligned_cols=27  Identities=22%  Similarity=0.496  Sum_probs=24.3

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      ++|.|++|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            349999999999999999999998864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=6.5e-08  Score=41.96  Aligned_cols=26  Identities=23%  Similarity=0.239  Sum_probs=23.5

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ++|.|++|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            34999999999999999999998874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.52  E-value=5.6e-08  Score=42.76  Aligned_cols=26  Identities=23%  Similarity=0.386  Sum_probs=17.2

Q ss_pred             ceeCC--CcchhccChHHHHHHHHhhcC
Q psy10073        114 QFKCC--LCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       114 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +|.|+  .|++.|.+.+.|..|+++|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            56666  666666666666666666653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.90  E-value=1.3e-08  Score=45.01  Aligned_cols=28  Identities=25%  Similarity=0.415  Sum_probs=25.4

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +|.|++|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            4999999999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.49  E-value=5.6e-08  Score=42.29  Aligned_cols=26  Identities=19%  Similarity=0.181  Sum_probs=23.3

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ++|.|++|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            34999999999999999999998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.49  E-value=7.8e-08  Score=41.60  Aligned_cols=26  Identities=15%  Similarity=0.416  Sum_probs=23.7

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      |.|++|++.|.....|..|+++|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            89999999999999999999998763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=44.82  Aligned_cols=29  Identities=24%  Similarity=0.566  Sum_probs=25.7

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ++|.|+.|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            34999999999999999999999998753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1e-07  Score=42.31  Aligned_cols=28  Identities=21%  Similarity=0.384  Sum_probs=25.0

Q ss_pred             ceeCCCCCcccCChhHHHHH-HHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNH-TLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  113 (144)
                      +|.|+.|++.|...+.|..| +++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            49999999999999999999 68888764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.5e-08  Score=41.58  Aligned_cols=25  Identities=24%  Similarity=0.454  Sum_probs=22.7

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      +|.|++|++.|...+.|..|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            4999999999999999999998873

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.24  E-value=3.1e-06  Score=44.91  Aligned_cols=49  Identities=14%  Similarity=0.308  Sum_probs=42.4

Q ss_pred             CCCCcccCChhHHHHHH-HhhcCCc------ceeCC--CcchhccChHHHHHHHHhhc
Q psy10073         90 VACDYFTIISQNMRNHT-LIHLGDK------QFKCC--LCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus        90 ~~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h~  138 (144)
                      ..|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++.+
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            45999999999999998 5787665      79996  89999999999999998754

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.22  E-value=7.6e-07  Score=38.90  Aligned_cols=26  Identities=23%  Similarity=0.497  Sum_probs=23.9

Q ss_pred             ceeCC--CCCcccCChhHHHHHHHhhcC
Q psy10073         86 KFICV--ACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        86 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      +|.|.  .|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            49999  999999999999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.59  E-value=1.1e-05  Score=48.08  Aligned_cols=28  Identities=18%  Similarity=0.355  Sum_probs=19.0

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHh
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      |+|+++|.|..|++.|.+.+.|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            5666677777777777777777777553

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.34  E-value=0.0002  Score=43.10  Aligned_cols=26  Identities=15%  Similarity=0.129  Sum_probs=22.4

Q ss_pred             cCCcceeCCCcchhccChHHHHHHHH
Q psy10073        110 LGDKQFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       110 ~~~~~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      .+...|.|.+|++.|.+...|..|..
T Consensus        89 ~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           89 GEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            44567889999999999999999975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.32  E-value=0.00023  Score=44.98  Aligned_cols=57  Identities=18%  Similarity=0.169  Sum_probs=44.2

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      .+..|+.|+..+ ....|..|+...-..++..|+.|+..+. ...|..|..++.|+.++
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            347899999887 5677899998777788899999998775 46789999999998765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.96  E-value=0.0012  Score=32.01  Aligned_cols=26  Identities=19%  Similarity=0.349  Sum_probs=20.3

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      .+|.|+.|+..|.....|+.|++.--
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CceeCCcccccccchHHHHhhhhhcC
Confidence            44888888888888888888887543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.95  E-value=0.00016  Score=43.11  Aligned_cols=27  Identities=30%  Similarity=0.428  Sum_probs=23.0

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHh
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      +++++|.|..|++.|.+...|..|+++
T Consensus        46 tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           46 PGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCcceEcccCcchhCCHHHHHHHHhh
Confidence            344449999999999999999999865

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.95  E-value=0.0015  Score=34.27  Aligned_cols=50  Identities=20%  Similarity=0.313  Sum_probs=31.7

Q ss_pred             CCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCC--CCCcccCChhHHHHHHHhh
Q psy10073         55 HCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICV--ACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        55 ~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h  109 (144)
                      .|+ .|.+.   ..|+...|.+.++     .....+|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~-----~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDF-----KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCC-----CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCccc-----CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            466 66666   5666345655541     0011238886  7888888888888888764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.57  E-value=0.0022  Score=31.17  Aligned_cols=28  Identities=18%  Similarity=0.097  Sum_probs=24.4

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      .+|.|+.|+..|.....|+.||+---++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            5799999999999999999999865444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.75  E-value=0.0079  Score=36.07  Aligned_cols=25  Identities=12%  Similarity=0.162  Sum_probs=21.5

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHH
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      +...|.|..|+..|.+...+..|..
T Consensus        90 ~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           90 EDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3444999999999999999999974

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=95.04  E-value=0.013  Score=33.62  Aligned_cols=24  Identities=8%  Similarity=0.001  Sum_probs=17.7

Q ss_pred             hhhhhhhcCCC----CCceecCccCCcc
Q psy10073          2 EHWEQCLLVPL----STKKTCLYCNKYV   25 (144)
Q Consensus         2 ~~~~~~~~~~~----~~~~~C~~C~~~f   25 (144)
                      +|.+..+...+    ..+|+|..||..|
T Consensus        50 eHIaksl~r~g~~L~v~p~~C~~CG~~F   77 (105)
T 2gmg_A           50 KVISKIAKREGMVLLIKPAQCRKCGFVF   77 (105)
T ss_dssp             HHHHHHHTTTTEEEEECCCBBTTTCCBC
T ss_pred             HHHHHHHhcCCcEEEEECcChhhCcCee
Confidence            56666666544    3479999999999

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.78  E-value=0.032  Score=25.24  Aligned_cols=20  Identities=25%  Similarity=0.361  Sum_probs=10.1

Q ss_pred             eeCCCcchhccChHHHHHHH
Q psy10073        115 FKCCLCSYGAYQKEKLQFHV  134 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~  134 (144)
                      |.|++|.+.|.+...|..|-
T Consensus         6 FiCP~C~~~l~s~~~L~~Hy   25 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHY   25 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHH
Confidence            44555555555555555553

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.43  E-value=0.052  Score=24.52  Aligned_cols=22  Identities=23%  Similarity=0.309  Sum_probs=20.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHh
Q psy10073         87 FICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      |.|++|.+.|.+...|..|-..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHHh
Confidence            9999999999999999999644

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=94.35  E-value=0.034  Score=26.86  Aligned_cols=32  Identities=16%  Similarity=0.319  Sum_probs=20.1

Q ss_pred             ceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcc
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTS   61 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~   61 (144)
                      .|.|..||+.|+.. +|..        +      ..-+|++|| ....
T Consensus         3 iY~C~rCg~~fs~~-el~~--------l------P~IrCpyCGyrii~   35 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE-QLKV--------L------PGVRCPYCGYKIIF   35 (48)
T ss_dssp             --CCCCTTTTCCCC-CSCC--------C------SSSCCTTTCCSCEE
T ss_pred             EEEeeccCCCccHH-HHhh--------C------CCcccCccCcEEEE
Confidence            58899999999863 4444        1      224688998 5433

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=94.17  E-value=0.01  Score=32.88  Aligned_cols=25  Identities=16%  Similarity=0.349  Sum_probs=15.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQ  114 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  114 (144)
                      ..|.+||+.|..   |.+|+..++|..|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             eEecccchhhHH---HHHHHHHccCCCH
Confidence            567777776663   5567766555554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.48  E-value=0.038  Score=34.62  Aligned_cols=79  Identities=11%  Similarity=0.198  Sum_probs=52.7

Q ss_pred             ceec--CccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeC
Q psy10073         15 KKTC--LYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFIC   89 (144)
Q Consensus        15 ~~~C--~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C   89 (144)
                      ...|  .-|+..+. ..+|..|. ..|       .-.+..|+.|+ .+...  ..|+ ...-..+.           ..|
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~-~~C-------~~~~v~C~~C~~~~~r~~l~~H~-~~~C~~r~-----------~~C  140 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQ-AHC-------EFALMDCPQCQRPFQKFHINIHI-LKDCPRRQ-----------VSC  140 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHH-TTC-------TTSEEECTTTCCEEEGGGHHHHH-HHTCTTCE-----------EEC
T ss_pred             ccCCCCCCCCceec-HhHHHHHH-hcC-------CceeeECCCCChHHHHHHHHHHh-hhhCCCCC-----------eEC
Confidence            4667  45776654 34566632 222       33567899999 77666  7787 65666666           899


Q ss_pred             CCCCcccCChhHHHHHHHhhcCCcce
Q psy10073         90 VACDYFTIISQNMRNHTLIHLGDKQF  115 (144)
Q Consensus        90 ~~C~~~f~~~~~l~~H~~~h~~~~~~  115 (144)
                      +.|+..+. ...|..|..++.|+.++
T Consensus       141 ~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          141 DNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             CCCCCccC-HHHHHhHHHhCcChhhh
Confidence            99998875 46789999999988764

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=92.66  E-value=0.33  Score=25.85  Aligned_cols=45  Identities=13%  Similarity=0.276  Sum_probs=24.5

Q ss_pred             CCeeC-CCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHH
Q psy10073         49 IPQSC-KHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        49 ~~~~C-~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  106 (144)
                      .+..| ..|+ .+...  ..|+ ...-..++           ..|..|+..+.. ..|..|.
T Consensus        15 ~~v~C~~~C~~~v~r~~l~~H~-~~~C~~r~-----------v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSRRDLPAHL-QHDCPKRR-----------LKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCCSSSSTTTT-TTSCTTSC-----------CCCSSSCCCCCH-HHHHHTT
T ss_pred             cccCCCccccHHhhHhHHHhhC-HhhCCCcc-----------eECCCCCCccCH-HHHHHHH
Confidence            44556 4677 55555  5565 43333344           667777766643 3455554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.58  E-value=0.049  Score=29.54  Aligned_cols=44  Identities=11%  Similarity=0.289  Sum_probs=21.9

Q ss_pred             CCeeCCCCC-CCcch--hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHH
Q psy10073         49 IPQSCKHCK-NFTSS--DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNH  105 (144)
Q Consensus        49 ~~~~C~~C~-~f~~~--~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  105 (144)
                      ..|.|..|| .+..+  ..|. ..-.+...           |.|..|++.|.. ..++.|
T Consensus         9 V~F~C~~Cgd~lKK~kv~~H~-~~Cr~~~~-----------~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVKKIQVEKHV-SNCRNCEC-----------LSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEETTHHHHHH-HHCTTCCE-----------EEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeeecccchhHH-hhCCCCCc-----------EEecccCCeeCC-CCEeCE
Confidence            345666666 55444  5554 33333223           666666666653 334444

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.54  E-value=0.26  Score=22.36  Aligned_cols=21  Identities=19%  Similarity=0.270  Sum_probs=13.0

Q ss_pred             eeCCCCCcccCChhHHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      +.|..|+-+|....++..|.+
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhe
Confidence            566666666666666666644

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=91.34  E-value=0.14  Score=29.10  Aligned_cols=22  Identities=18%  Similarity=0.542  Sum_probs=16.5

Q ss_pred             eeCC---CCCcccCChhHHHHHHHh
Q psy10073         87 FICV---ACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        87 ~~C~---~C~~~f~~~~~l~~H~~~  108 (144)
                      |.|.   .|.+.|.+..+|+.|+..
T Consensus        59 f~C~~~~~CkrtyLs~rdlqaHI~~   83 (101)
T 3vk6_A           59 FMCSIVQGCKRTYLSQRDLQAHINH   83 (101)
T ss_dssp             CCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred             EECCCCCCHHHHhcCHHHHHHHHHH
Confidence            7776   477888888888888754

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.16  E-value=0.31  Score=22.12  Aligned_cols=26  Identities=12%  Similarity=0.062  Sum_probs=20.9

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhh
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      ...+.|..|+-+|.+...+..|.+--
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            34578999999999999998887643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.06  E-value=0.069  Score=28.97  Aligned_cols=47  Identities=19%  Similarity=0.318  Sum_probs=36.1

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHH
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHV  134 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  134 (144)
                      .|.|..|+..+. +..+..|...-.+...|.|-.|++.|.. .+++.|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            499999998765 5678899776555567999999999985 4455553

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=90.27  E-value=0.28  Score=23.71  Aligned_cols=14  Identities=21%  Similarity=0.339  Sum_probs=10.2

Q ss_pred             CceecCccCCccCC
Q psy10073         14 TKKTCLYCNKYVPS   27 (144)
Q Consensus        14 ~~~~C~~C~~~f~~   27 (144)
                      +.|.|..||..+.-
T Consensus         3 ~~y~C~vCGyvyd~   16 (46)
T 6rxn_A            3 QKYVCNVCGYEYDP   16 (46)
T ss_dssp             CCEEETTTCCEECG
T ss_pred             CEEECCCCCeEEeC
Confidence            46788888877764

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=90.11  E-value=0.29  Score=24.56  Aligned_cols=15  Identities=27%  Similarity=0.516  Sum_probs=10.4

Q ss_pred             CceecCccCCccCCc
Q psy10073         14 TKKTCLYCNKYVPSD   28 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~   28 (144)
                      +.|.|..||..+.-.
T Consensus         2 ~~y~C~vCGyvYd~~   16 (54)
T 4rxn_A            2 KKYTCTVCGYIYDPE   16 (54)
T ss_dssp             CCEEETTTCCEECTT
T ss_pred             CceECCCCCeEECCC
Confidence            457788888777654

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=89.85  E-value=0.52  Score=23.42  Aligned_cols=15  Identities=13%  Similarity=0.231  Sum_probs=9.9

Q ss_pred             CceecCccCCccCCc
Q psy10073         14 TKKTCLYCNKYVPSD   28 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~   28 (144)
                      +.|.|..||..+.-.
T Consensus         2 ~~y~C~~CGyvYd~~   16 (52)
T 1e8j_A            2 DIYVCTVCGYEYDPA   16 (52)
T ss_dssp             CCEECSSSCCCCCTT
T ss_pred             CcEEeCCCCeEEcCC
Confidence            357788888776543

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=89.26  E-value=0.061  Score=29.20  Aligned_cols=15  Identities=33%  Similarity=0.693  Sum_probs=11.5

Q ss_pred             CcceeCCCcchhccC
Q psy10073        112 DKQFKCCLCSYGAYQ  126 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~  126 (144)
                      +-.|+|+.||..|.-
T Consensus        49 ~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A           49 EFVFKCPVCGEEFYG   63 (95)
T ss_dssp             HSEEECTTTCCEEET
T ss_pred             HHhhcCCCccHHHhc
Confidence            346899999988764

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=88.97  E-value=0.29  Score=27.08  Aligned_cols=28  Identities=25%  Similarity=0.408  Sum_probs=20.8

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhhcCCCC
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNKHSTKV  142 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  142 (144)
                      +....|.+||+.|..   |.+|+.+++|..|
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCCH
Confidence            344788888888874   6788888777654

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=88.38  E-value=0.5  Score=25.81  Aligned_cols=13  Identities=15%  Similarity=0.291  Sum_probs=7.2

Q ss_pred             ceecCccCCccCC
Q psy10073         15 KKTCLYCNKYVPS   27 (144)
Q Consensus        15 ~~~C~~C~~~f~~   27 (144)
                      .|.|..||..+.-
T Consensus        27 ~y~C~vCGyvYD~   39 (81)
T 2kn9_A           27 LFRCIQCGFEYDE   39 (81)
T ss_dssp             EEEETTTCCEEET
T ss_pred             eEEeCCCCEEEcC
Confidence            4666666655543

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=88.35  E-value=0.23  Score=32.16  Aligned_cols=27  Identities=26%  Similarity=0.589  Sum_probs=20.4

Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchh
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG  123 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  123 (144)
                      ...|.|..||..+.             |..|+.|++|+..
T Consensus       169 ~~~~~C~~CG~i~~-------------g~~p~~CP~C~~~  195 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------GEDFEKCPICFRP  195 (202)
T ss_dssp             CCEEECSSSCCEEE-------------SSCCSBCTTTCCB
T ss_pred             CcEEEECCCCCEEc-------------CcCCCCCCCCCCC
Confidence            34599999998764             2467899999853

>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...

Probab=87.90  E-value=0.43  Score=23.72  Aligned_cols=14  Identities=29%  Similarity=0.560  Sum_probs=9.4

Q ss_pred             ceecCccCCccCCc
Q psy10073         15 KKTCLYCNKYVPSD   28 (144)
Q Consensus        15 ~~~C~~C~~~f~~~   28 (144)
                      .|.|..||..+.-.
T Consensus         2 ~~~C~~CGyvYd~~   15 (52)
T 1yk4_A            2 KLSCKICGYIYDED   15 (52)
T ss_dssp             EEEESSSSCEEETT
T ss_pred             cEEeCCCCeEECCC
Confidence            47777777776543

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.85  E-value=0.41  Score=20.51  Aligned_cols=20  Identities=45%  Similarity=0.795  Sum_probs=11.8

Q ss_pred             eeCCCcchhccChHHHHHHH
Q psy10073        115 FKCCLCSYGAYQKEKLQFHV  134 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~  134 (144)
                      |.|++|.....+...|..|-
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~   23 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHV   23 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHH
Confidence            55666666666666665553

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=87.71  E-value=0.41  Score=26.16  Aligned_cols=30  Identities=20%  Similarity=0.430  Sum_probs=19.6

Q ss_pred             CCCCCceecCccCCccCCccccccccCCCCCC
Q psy10073         10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      .+....-.|..|+..|..  ...+|+|..||.
T Consensus        14 ~~d~~~~~C~~C~~~Fs~--~~RrHHCR~CG~   43 (82)
T 2yw8_A           14 LKDDEATHCRQCEKEFSI--SRRKHHCRNCGH   43 (82)
T ss_dssp             -CCCCCCBCTTTCCBCBT--TBCCEECTTTCC
T ss_pred             ccCccCCcccCcCCcccC--ccccccCCCCCC
Confidence            345555689999999973  345566666654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.24  E-value=0.38  Score=21.13  Aligned_cols=23  Identities=17%  Similarity=0.083  Sum_probs=19.7

Q ss_pred             eeCCCCCcccCChhHHHHHHHhh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      -.|..|.+.|+...+|..|++--
T Consensus        10 qhcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            57899999999999999998753

>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}

Probab=86.74  E-value=0.5  Score=23.78  Aligned_cols=15  Identities=20%  Similarity=0.395  Sum_probs=10.1

Q ss_pred             CceecCccCCccCCc
Q psy10073         14 TKKTCLYCNKYVPSD   28 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~   28 (144)
                      +.|.|..||..+.-.
T Consensus         2 ~~y~C~~CGyvYd~~   16 (55)
T 2v3b_B            2 RKWQCVVCGFIYDEA   16 (55)
T ss_dssp             CEEEETTTCCEEETT
T ss_pred             CcEEeCCCCeEECCC
Confidence            357788888776543

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=86.49  E-value=0.38  Score=31.15  Aligned_cols=26  Identities=23%  Similarity=0.439  Sum_probs=22.3

Q ss_pred             CcceeCCCcchhccC-hHHHHHHHHhh
Q psy10073        112 DKQFKCCLCSYGAYQ-KEKLQFHVKNK  137 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~-~~~l~~H~~~h  137 (144)
                      ..|.+|..|+..|.+ -..|+.|+..|
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            457899999999987 89999998865

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.00  E-value=0.57  Score=25.68  Aligned_cols=30  Identities=20%  Similarity=0.355  Sum_probs=21.0

Q ss_pred             CCCCCceecCccCCccCCccccccccCCCCCC
Q psy10073         10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      .+....-.|..|+..|..  -.++|+|..||.
T Consensus         9 ~pd~~~~~C~~C~~~F~~--~~RrHHCR~CG~   38 (84)
T 1x4u_A            9 YPTNNFGNCTGCSATFSV--LKKRRSCSNCGN   38 (84)
T ss_dssp             CSCCCCSSCSSSCCCCCS--SSCCEECSSSCC
T ss_pred             ccCCCCCcCcCcCCcccc--chhhhhhcCCCc
Confidence            344556689999999964  346677777765

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=85.88  E-value=0.53  Score=24.97  Aligned_cols=14  Identities=21%  Similarity=0.456  Sum_probs=11.3

Q ss_pred             ceecCccCCccCCc
Q psy10073         15 KKTCLYCNKYVPSD   28 (144)
Q Consensus        15 ~~~C~~C~~~f~~~   28 (144)
                      .|.|..||..|...
T Consensus        28 ~Y~C~~CG~~~e~~   41 (70)
T 1twf_L           28 KYICAECSSKLSLS   41 (70)
T ss_dssp             CEECSSSCCEECCC
T ss_pred             EEECCCCCCcceeC
Confidence            59999999987654

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=85.36  E-value=0.7  Score=25.32  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=20.8

Q ss_pred             CCCCCceecCccCCccCCccccccccCCCCCC
Q psy10073         10 VPLSTKKTCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      .+....-.|..|+..|...  .++|+|..||.
T Consensus        16 ~pd~~~~~C~~C~~~Fs~~--~RrHHCR~CG~   45 (84)
T 1z2q_A           16 QEDEDAPACNGCGCVFTTT--VRRHHCRNCGY   45 (84)
T ss_dssp             CCTTTCCBCTTTCCBCCTT--SCCEECTTTCC
T ss_pred             ccCCCCCCCcCcCCccccc--hhcccccCCCc
Confidence            3444556899999999753  45677776665

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=85.07  E-value=0.65  Score=21.56  Aligned_cols=22  Identities=23%  Similarity=0.446  Sum_probs=11.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHhh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      +.|+.|+..+.. ..+..|.-.|
T Consensus        10 ~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A           10 VPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             EECTTTCCEEEG-GGHHHHHHHH
T ss_pred             cccccccCcCCc-ccccchhhHH
Confidence            566666666554 3345554443

>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A

Probab=84.94  E-value=0.89  Score=24.08  Aligned_cols=17  Identities=18%  Similarity=0.298  Sum_probs=11.6

Q ss_pred             CCceecCccCCccCCcc
Q psy10073         13 STKKTCLYCNKYVPSDI   29 (144)
Q Consensus        13 ~~~~~C~~C~~~f~~~~   29 (144)
                      ...|.|..||..+.-..
T Consensus         5 m~~y~C~vCGyiYd~~~   21 (70)
T 1dx8_A            5 EGKYECEACGYIYEPEK   21 (70)
T ss_dssp             SSCEEETTTCCEECTTT
T ss_pred             CceEEeCCCCEEEcCCC
Confidence            34688888887776443

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.48  E-value=1.4  Score=23.31  Aligned_cols=45  Identities=13%  Similarity=0.288  Sum_probs=32.3

Q ss_pred             Cceec-CccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CCcch--hhhh
Q psy10073         14 TKKTC-LYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NFTSS--DVNL   66 (144)
Q Consensus        14 ~~~~C-~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f~~~--~~H~   66 (144)
                      .+..| ..|+..+.. .+|..       |....-..++..|..|+ .+...  ..|.
T Consensus        15 ~~v~C~~~C~~~v~r-~~l~~-------H~~~~C~~r~v~C~~C~~~~~~~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSR-RDLPA-------HLQHDCPKRRLKCEFCGCDFSGEAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCCS-SSSTT-------TTTTSCTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred             cccCCCccccHHhhH-hHHHh-------hCHhhCCCcceECCCCCCccCHHHHHHHH
Confidence            35788 589988765 57888       55544556778899999 88766  5565

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.42  E-value=0.44  Score=23.75  Aligned_cols=20  Identities=20%  Similarity=0.341  Sum_probs=18.1

Q ss_pred             eeCCCCCcccCChhHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~  106 (144)
                      -.|..|+..|.....++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58999999999999999987

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=84.13  E-value=0.99  Score=26.66  Aligned_cols=28  Identities=14%  Similarity=0.286  Sum_probs=22.6

Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      +.+..|..|...|.+...+..|++..++
T Consensus        13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           13 RQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            3458899999989888888888887665

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.69  E-value=0.47  Score=25.59  Aligned_cols=24  Identities=29%  Similarity=0.438  Sum_probs=13.6

Q ss_pred             eeCCCcchhcc-------ChHHHHHHHHhhc
Q psy10073        115 FKCCLCSYGAY-------QKEKLQFHVKNKH  138 (144)
Q Consensus       115 ~~C~~C~~~f~-------~~~~l~~H~~~h~  138 (144)
                      -.|..|++.++       .-+.|.+|++..+
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H   59 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMH   59 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTT
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHC
Confidence            34555555554       3456777776544

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.46  E-value=0.47  Score=30.70  Aligned_cols=8  Identities=25%  Similarity=0.600  Sum_probs=5.2

Q ss_pred             CeeCCCCC
Q psy10073         50 PQSCKHCK   57 (144)
Q Consensus        50 ~~~C~~C~   57 (144)
                      .|.|+.||
T Consensus       171 ~~~C~~CG  178 (202)
T 1yuz_A          171 FHLCPICG  178 (202)
T ss_dssp             EEECSSSC
T ss_pred             EEEECCCC
Confidence            46666666

>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1

Probab=83.23  E-value=0.82  Score=25.32  Aligned_cols=12  Identities=25%  Similarity=0.598  Sum_probs=6.4

Q ss_pred             ceecCccCCccC
Q psy10073         15 KKTCLYCNKYVP   26 (144)
Q Consensus        15 ~~~C~~C~~~f~   26 (144)
                      .|.|..||..+.
T Consensus        35 ~y~C~vCGyvYD   46 (87)
T 1s24_A           35 KWICITCGHIYD   46 (87)
T ss_dssp             EEEETTTTEEEE
T ss_pred             eEECCCCCeEec
Confidence            355555555544

>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*

Probab=82.72  E-value=0.42  Score=28.97  Aligned_cols=15  Identities=20%  Similarity=0.135  Sum_probs=11.0

Q ss_pred             ceecCccCCccCCcc
Q psy10073         15 KKTCLYCNKYVPSDI   29 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~   29 (144)
                      .+.|..||..|....
T Consensus        70 ~~~C~~CG~~~~~~~   84 (139)
T 3a43_A           70 VFKCRNCNYEWKLKE   84 (139)
T ss_dssp             EEEETTTCCEEEGGG
T ss_pred             cEECCCCCCEEeccc
Confidence            478888888876543

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=82.28  E-value=1.3  Score=22.93  Aligned_cols=14  Identities=14%  Similarity=0.173  Sum_probs=11.2

Q ss_pred             CceecCccCCccCC
Q psy10073         14 TKKTCLYCNKYVPS   27 (144)
Q Consensus        14 ~~~~C~~C~~~f~~   27 (144)
                      -.|.|..||..+.-
T Consensus        20 v~Y~C~~Cg~~~~l   33 (63)
T 3h0g_L           20 MIYLCADCGARNTI   33 (63)
T ss_dssp             CCCBCSSSCCBCCC
T ss_pred             eEEECCCCCCeeec
Confidence            45999999988763

>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3

Probab=82.26  E-value=2.1  Score=23.49  Aligned_cols=25  Identities=20%  Similarity=0.558  Sum_probs=17.0

Q ss_pred             cCCCCCCccccCCCCCeeCCCCC-CCcch
Q psy10073         35 HCQTCPNMSFLNSVIPQSCKHCK-NFTSS   62 (144)
Q Consensus        35 ~c~~c~h~~~h~~~~~~~C~~C~-~f~~~   62 (144)
                      .|.+|.-   ...+..|.|.+|+ .|...
T Consensus        17 ~C~VC~~---~t~~~l~pCRvC~RvfH~~   42 (89)
T 1wil_A           17 MCDVCEV---WTAESLFPCRVCTRVFHDG   42 (89)
T ss_dssp             CCTTTCC---CCSSCCSSCSSSSSCCCHH
T ss_pred             ccCcccc---ccccceeccccccccccHh
Confidence            3444443   2356678899999 88887

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=80.45  E-value=1  Score=23.95  Aligned_cols=23  Identities=26%  Similarity=0.638  Sum_probs=16.5

Q ss_pred             ecCccCCccCCccccccccCCCCCC
Q psy10073         17 TCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        17 ~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      .|..|++.|..  ...+|+|..||.
T Consensus        13 ~C~~C~~~F~~--~~RrHHCR~CG~   35 (73)
T 1vfy_A           13 ACMICSKKFSL--LNRKHHCRSCGG   35 (73)
T ss_dssp             BCTTTCCBCBT--TBCCEECTTTCC
T ss_pred             cccCCCCccCC--ccccccCCCCCE
Confidence            79999999974  245666666665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	144
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.82
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.58
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.57
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.51
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.48
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.45
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.44
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.41
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.41
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.4
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.4
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.37
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.28
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.26
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.25
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.25
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.24
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.23
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.22
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.2
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.2
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.17
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.15
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.09
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.0
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.0
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.99
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.86
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.76
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.75
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.7
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.7
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.6
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.48
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.47
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.4
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.31
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.3
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.27
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.24
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.24
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.21
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.04
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.0
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.99
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.98
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.94
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.93
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.87
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.86
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.85
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.81
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.74
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.73
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.71
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.63
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.62
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.61
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.61
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.56
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.54
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.54
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.36
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.27
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.21
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.16
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.09
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.95
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.9
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.87
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.8
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.73
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.65
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.51
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.38
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.13
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.08
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.98
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.98
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.71
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.59
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.46
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	95.21
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.14
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.1
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.63
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.56
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.55
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.48
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	93.77
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.13
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.0
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.96
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.95
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	92.46
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.42
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	92.21
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.13
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	92.02
d1brfa_	53	Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2	90.97
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.83
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	90.19
d2dsxa1	52	Rubredoxin {Desulfovibrio gigas [TaxId: 879]}	89.68
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	89.61
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	89.6
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	88.74
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.27
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	88.07
d1wila_	89	Hypothetical protein KIAA1045 {Human (Homo sapiens	87.26
d1zina2	35	Microbial and mitochondrial ADK, insert "zinc fing	86.82
d1s3ga2	35	Microbial and mitochondrial ADK, insert "zinc fing	85.94
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.6
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	85.44
d1dx8a_	70	Rubredoxin {Guillardia theta [TaxId: 55529]}	84.83
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	84.59
d1fu9a_	36	U-shaped transcription factor, different fingers {	83.11
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.84
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	81.26
d1e4va2	35	Microbial and mitochondrial ADK, insert "zinc fing	80.28
d2dkta1	74	RING finger and CHY zinc finger domain-containing	80.25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.1e-21  Score=97.84  Aligned_cols=52  Identities=23%  Similarity=0.387  Sum_probs=49.8

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccChHHHHHHHHhh
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      ++|.| .||+.|.....|..|+++|++++||.|.+||++|.+.+.|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            45999 59999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.9e-16  Score=80.78  Aligned_cols=49  Identities=24%  Similarity=0.438  Sum_probs=41.1

Q ss_pred             CCCeeCCCCC-CCcch---hhhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhh
Q psy10073         48 VIPQSCKHCK-NFTSS---DVNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        48 ~~~~~C~~C~-~f~~~---~~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      ++||.|+ || .|...   ..|+ ++|++++|           |.|++||+.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekp-----------y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRP-----------YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHSCCCS-----------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hccccccC-----------CcCCCcCCEecCHHHHHHHHhcC
Confidence            5788884 88 88877   8888 88888888           88888998898888888888776

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.3e-17  Score=75.69  Aligned_cols=37  Identities=14%  Similarity=0.272  Sum_probs=27.6

Q ss_pred             HHHHhhcCCcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        104 NHTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       104 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +|+++|++++||.|++||++|.+.++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3666777777777777777777777777777777775

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=7.9e-16  Score=69.66  Aligned_cols=33  Identities=24%  Similarity=0.448  Sum_probs=26.9

Q ss_pred             hhcCCcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +|++++||+|.+||++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            477888888888888888888888888888875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.6e-15  Score=70.06  Aligned_cols=36  Identities=19%  Similarity=0.473  Sum_probs=26.4

Q ss_pred             CCceeCCCCCcccCChhHHHHHHH-hhcCCcceeCCC
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTL-IHLGDKQFKCCL  119 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  119 (144)
                      ++||.|.+||+.|...++|.+|++ +|++++||+|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            344778888888887778888764 577777777764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.6e-15  Score=68.82  Aligned_cols=34  Identities=32%  Similarity=0.583  Sum_probs=25.9

Q ss_pred             HhhcCCcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        107 LIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       107 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      ++|+|++||+|.+||++|.+.+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            3677777777777777777777777777777765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.1e-14  Score=68.39  Aligned_cols=34  Identities=24%  Similarity=0.395  Sum_probs=31.7

Q ss_pred             CCcceeCCCcchhccChHHHHHHHH-hhcCCCCCC
Q psy10073        111 GDKQFKCCLCSYGAYQKEKLQFHVK-NKHSTKVKD  144 (144)
Q Consensus       111 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~kp~~  144 (144)
                      .++||+|+.||++|...+.|.+|++ +|+|+|||+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~   36 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   36 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcC
Confidence            4799999999999999999999976 799999995

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=4.2e-15  Score=69.43  Aligned_cols=35  Identities=26%  Similarity=0.331  Sum_probs=26.4

Q ss_pred             HHHhhcCCcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        105 HTLIHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       105 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      |.++|+|++||+|++|+++|++++.|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45677777777777777777777777777777754

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=2.9e-14  Score=65.27  Aligned_cols=32  Identities=25%  Similarity=0.415  Sum_probs=23.8

Q ss_pred             hcCCcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        109 HLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       109 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      |+|++||+|++|++.|.+++.|.+|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777777777777777777777777777664

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.44  E-value=3.1e-14  Score=62.57  Aligned_cols=29  Identities=24%  Similarity=0.552  Sum_probs=21.7

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|++|+++|++.+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=5.4e-14  Score=65.04  Aligned_cols=33  Identities=27%  Similarity=0.666  Sum_probs=23.1

Q ss_pred             hhcCCcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        108 IHLGDKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       108 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +|+|++||+|++|++.|+++++|.+|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            577777777777777777777777776554443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.41  E-value=5.3e-14  Score=61.06  Aligned_cols=28  Identities=21%  Similarity=0.580  Sum_probs=20.6

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      |+||+|++|+++|++++.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777765

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=5.5e-14  Score=61.62  Aligned_cols=29  Identities=28%  Similarity=0.550  Sum_probs=20.0

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|++|+++|.+++.|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46677777777777777777777777664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.4e-13  Score=62.14  Aligned_cols=32  Identities=22%  Similarity=0.359  Sum_probs=28.1

Q ss_pred             CCCCCceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         81 DPVKYKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      |++++||.|.+|+++|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            44444499999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=7.2e-14  Score=65.57  Aligned_cols=37  Identities=19%  Similarity=0.323  Sum_probs=33.7

Q ss_pred             hhhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         64 VNLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        64 ~H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      +|+ ++|++++|           |.|++||++|...++|..|+++|+||
T Consensus         2 rH~-~~Ht~ekp-----------y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSE-WQQRERRR-----------YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCC-SCCCCSCS-----------SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccC-cccCCCCC-----------EecCCCCceeeCHHHHHHhCccCCCC
Confidence            467 78888888           99999999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.37  E-value=1.8e-14  Score=70.65  Aligned_cols=41  Identities=15%  Similarity=0.409  Sum_probs=33.9

Q ss_pred             hHHHHHHHhhcCCcceeCCC--cchhccChHHHHHHHHhhcCCC
Q psy10073        100 QNMRNHTLIHLGDKQFKCCL--CSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       100 ~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      ..|..|+. |++++||.|++  |+++|+..+.|..|+++|+|||
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34556664 88999999977  9999999999999999999886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=7.8e-13  Score=61.13  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=28.4

Q ss_pred             cCCCCCceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        80 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      +|++++||.|.+|+++|...+.|..|+++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            444555599999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=7.8e-13  Score=55.91  Aligned_cols=26  Identities=27%  Similarity=0.397  Sum_probs=18.5

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhc
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      +||+|.+||++|.+.+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.26  E-value=1.7e-12  Score=56.82  Aligned_cols=28  Identities=21%  Similarity=0.500  Sum_probs=26.7

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ||.|++|+++|...+.|.+|+++|+||+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            4999999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=3e-12  Score=58.40  Aligned_cols=32  Identities=22%  Similarity=0.288  Sum_probs=27.7

Q ss_pred             CCCCceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         82 PVKYKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ++++||.|++|++.|.+.++|.+|+++|+++.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            44455999999999999999999999998753

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.5e-12  Score=56.19  Aligned_cols=28  Identities=29%  Similarity=0.494  Sum_probs=26.6

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ||.|++|+++|...+.|.+|+++|+|++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            4999999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.5e-12  Score=59.14  Aligned_cols=32  Identities=19%  Similarity=0.542  Sum_probs=25.1

Q ss_pred             eeCCC--CCcccCChhHHHHHHHhhcCCcceeCC
Q psy10073         87 FICVA--CDYFTIISQNMRNHTLIHLGDKQFKCC  118 (144)
Q Consensus        87 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  118 (144)
                      |.|+.  |++.|...+.|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67765  888888888888888888888888776

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=2.8e-12  Score=55.51  Aligned_cols=27  Identities=26%  Similarity=0.367  Sum_probs=25.3

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      +||.|++|++.|...++|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            459999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=3.5e-12  Score=59.28  Aligned_cols=35  Identities=23%  Similarity=0.273  Sum_probs=29.7

Q ss_pred             hhhhcccCCCCcccccCCCCCceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         65 NLLMEHSENCPCMVRPDPVKYKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        65 H~~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      |. ++|++++|           |.|++|++.|.+.++|..|+++|.+
T Consensus         2 h~-R~HTgeKP-----------y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 ST-RGSTGIKP-----------FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CS-STTCCSSS-----------BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CC-CccCCccC-----------eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            44 66666666           9999999999999999999999864

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=8.2e-12  Score=57.51  Aligned_cols=32  Identities=19%  Similarity=0.226  Sum_probs=25.7

Q ss_pred             cCCCCCceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         80 PDPVKYKFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        80 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      +|++++||.|++|++.|...++|..|++.+++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            34444559999999999999999999865443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.4e-12  Score=55.76  Aligned_cols=28  Identities=25%  Similarity=0.521  Sum_probs=19.5

Q ss_pred             cceeCCC--cchhccChHHHHHHHHhhcCC
Q psy10073        113 KQFKCCL--CSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +||.|+.  |+++|++.+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677766  777777777777777777765

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.4e-12  Score=55.84  Aligned_cols=28  Identities=25%  Similarity=0.456  Sum_probs=20.6

Q ss_pred             cceeCCC--cchhccChHHHHHHHHhhcCC
Q psy10073        113 KQFKCCL--CSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +||.|++  |+++|++.+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677765  777777777777777777775

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=8.1e-12  Score=57.39  Aligned_cols=30  Identities=27%  Similarity=0.316  Sum_probs=28.3

Q ss_pred             eeCCC--cchhccChHHHHHHHHhhcCCCCCC
Q psy10073        115 FKCCL--CSYGAYQKEKLQFHVKNKHSTKVKD  144 (144)
Q Consensus       115 ~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~  144 (144)
                      |.|+.  |+++|.+.+.|.+|+++|+|+|||+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEe
Confidence            78876  9999999999999999999999995

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=8.8e-12  Score=55.32  Aligned_cols=29  Identities=24%  Similarity=0.507  Sum_probs=20.8

Q ss_pred             cceeCC--CcchhccChHHHHHHHHhhcCCC
Q psy10073        113 KQFKCC--LCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       113 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +||.|+  .|+++|+..+.|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            467774  47777777777777777777765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3e-11  Score=50.92  Aligned_cols=25  Identities=24%  Similarity=0.470  Sum_probs=23.7

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ||.|.+||+.|...+.|.+|+++|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            4999999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=5.9e-11  Score=51.60  Aligned_cols=27  Identities=15%  Similarity=0.433  Sum_probs=19.4

Q ss_pred             cceeCCC--cchhccChHHHHHHHHhhcC
Q psy10073        113 KQFKCCL--CSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +||+|++  |+++|++.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677755  77777777777777777765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.00  E-value=6e-11  Score=57.81  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=30.8

Q ss_pred             cccCCCCcccccCCCCCceeCCC--CCcccCChhHHHHHHHhhcCCc
Q psy10073         69 EHSENCPCMVRPDPVKYKFICVA--CDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        69 ~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      .|.+++|           |.|++  |++.|...++|..|+++|+|++
T Consensus        12 ~h~gekp-----------y~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKT-----------FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTE-----------EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCC-----------eECCcCCCCccccCchHHHhhcccccCCC
Confidence            4788888           99987  9999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.4e-10  Score=50.80  Aligned_cols=27  Identities=22%  Similarity=0.380  Sum_probs=25.5

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhhcCC
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      ||.|++  |+++|...+.|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            499988  999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.99  E-value=1.4e-10  Score=51.57  Aligned_cols=28  Identities=21%  Similarity=0.457  Sum_probs=17.8

Q ss_pred             CcceeCCC--cchhccChHHHHHHHHhhcC
Q psy10073        112 DKQFKCCL--CSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       112 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  139 (144)
                      |+||.|++  |+++|+..+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45666655  66666666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.8e-10  Score=50.55  Aligned_cols=27  Identities=37%  Similarity=0.646  Sum_probs=25.3

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhhcCC
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      ||.|++  |+++|...+.|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            499987  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=4.6e-10  Score=49.61  Aligned_cols=28  Identities=29%  Similarity=0.577  Sum_probs=25.7

Q ss_pred             ceeCC--CCCcccCChhHHHHHHHhhcCCc
Q psy10073         86 KFICV--ACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        86 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      ||.|+  .|+++|...++|..|+++|+|++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            49995  59999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=2.5e-10  Score=49.02  Aligned_cols=26  Identities=19%  Similarity=0.443  Sum_probs=16.0

Q ss_pred             cceeCCC--cchhccChHHHHHHHHhhc
Q psy10073        113 KQFKCCL--CSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  138 (144)
                      +||.|+.  |+++|++.+.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566655  6666666666666666653

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=1.4e-09  Score=45.04  Aligned_cols=27  Identities=22%  Similarity=0.428  Sum_probs=22.4

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhhc
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      ++||.|++||+.|+.+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888888874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=1.9e-09  Score=46.72  Aligned_cols=26  Identities=31%  Similarity=0.563  Sum_probs=24.3

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhhcC
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  111 (144)
                      ||.|++  |+++|.+.+.|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            499988  99999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.4e-09  Score=46.03  Aligned_cols=29  Identities=17%  Similarity=0.162  Sum_probs=18.2

Q ss_pred             eeCCCcchhccChHHHHHHHHhhcCCCCC
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKHSTKVK  143 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  143 (144)
                      ..|+.||+.|.....|++|.-.|++||||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45666666666666666666666666665

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=4.6e-09  Score=46.55  Aligned_cols=28  Identities=18%  Similarity=0.362  Sum_probs=25.2

Q ss_pred             CceeCCC--CCcccCChhHHHHHHHhhcCC
Q psy10073         85 YKFICVA--CDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        85 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      +||.|++  |++.|...++|.+|+++|+..
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            4499988  999999999999999999853

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3.2e-09  Score=42.58  Aligned_cols=25  Identities=28%  Similarity=0.535  Sum_probs=14.7

Q ss_pred             eeCCCcchhccChHHHHHHHHhhcC
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      .+|++|++.|+.+..|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666665554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.6e-09  Score=42.90  Aligned_cols=29  Identities=24%  Similarity=0.753  Sum_probs=21.6

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      ++||+|..|.....+.+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46777777777777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=6e-09  Score=44.60  Aligned_cols=25  Identities=28%  Similarity=0.592  Sum_probs=23.2

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhhc
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h~  110 (144)
                      ||.|++  |+++|...++|.+|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            499988  9999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.4e-08  Score=43.62  Aligned_cols=31  Identities=23%  Similarity=0.467  Sum_probs=28.8

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCCccee
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGDKQFK  116 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  116 (144)
                      ...|+.||+.|.+...|.+|...|++++||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            3899999999999999999999999999983

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.1e-08  Score=39.27  Aligned_cols=25  Identities=20%  Similarity=0.414  Sum_probs=23.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      .+|+.|++.|+.+..|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            7899999999999999999999975

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5e-08  Score=40.88  Aligned_cols=27  Identities=22%  Similarity=0.710  Sum_probs=13.7

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +||.|++|+..|..+..+.-|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            445555555555555555555555444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=7.3e-08  Score=39.79  Aligned_cols=26  Identities=35%  Similarity=0.489  Sum_probs=23.5

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      +||.|.+||+.|.......+|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            45999999999999999999999885

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=9.9e-08  Score=38.89  Aligned_cols=25  Identities=20%  Similarity=0.304  Sum_probs=13.6

Q ss_pred             eCCCcchhccChHHHHHHHHhhcCC
Q psy10073        116 KCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      .|..||++|...+.|.+|+-+|+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccCC
Confidence            4555555555555555555555543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.7e-07  Score=37.99  Aligned_cols=26  Identities=19%  Similarity=0.439  Sum_probs=12.7

Q ss_pred             eeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      |.|+.||...+-.+-|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            34444554444445555555555444

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=3.2e-07  Score=37.25  Aligned_cols=26  Identities=31%  Similarity=0.641  Sum_probs=21.8

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhc
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.8e-07  Score=38.55  Aligned_cols=27  Identities=33%  Similarity=0.562  Sum_probs=15.8

Q ss_pred             cceeCCC--cchhccChHHHHHHHHhhcC
Q psy10073        113 KQFKCCL--CSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +||.|.+  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            3556644  66666666666666665543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.4e-07  Score=37.26  Aligned_cols=26  Identities=27%  Similarity=0.719  Sum_probs=24.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      ..|.+||++|...+.|.+|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            68999999999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=4.8e-07  Score=37.01  Aligned_cols=28  Identities=32%  Similarity=0.530  Sum_probs=25.4

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      +||+|..|...-.+.+.|..|++.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4499999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=4.8e-07  Score=36.30  Aligned_cols=26  Identities=23%  Similarity=0.378  Sum_probs=19.2

Q ss_pred             eCCCcchhccChHHHHHHHHhhcCCC
Q psy10073        116 KCCLCSYGAYQKEKLQFHVKNKHSTK  141 (144)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~~h~~~k  141 (144)
                      +|+.|.++|.++..|..|.+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=4.3e-07  Score=37.99  Aligned_cols=28  Identities=21%  Similarity=0.325  Sum_probs=25.3

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      +||.|++|+..|..+..+.-|.+.|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            4599999999999999999999999874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=7.7e-07  Score=36.58  Aligned_cols=27  Identities=19%  Similarity=0.429  Sum_probs=25.3

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      |.|++|+..-..++-|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            899999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.04  E-value=1.3e-06  Score=34.43  Aligned_cols=23  Identities=30%  Similarity=0.580  Sum_probs=13.9

Q ss_pred             eeCCCcchhccChHHHHHHHHhh
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h  137 (144)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666655

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.00  E-value=3e-06  Score=38.00  Aligned_cols=27  Identities=15%  Similarity=0.371  Sum_probs=15.3

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      .|.|.+|++.|.+...|-.|++.|..+
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             ccCCCCCCCccCCcccccchHhhhcch
Confidence            455555555555555555555555444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.6e-06  Score=35.08  Aligned_cols=28  Identities=36%  Similarity=0.697  Sum_probs=19.4

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcCC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +||+|+.|.....+.++|..|++.-+++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4677777777777777777777665543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=3.1e-06  Score=35.32  Aligned_cols=26  Identities=19%  Similarity=0.410  Sum_probs=22.7

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhhcC
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  111 (144)
                      ||.|..  |++++..+++|+.|++.++|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            499977  99999999999999997654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.6e-06  Score=38.49  Aligned_cols=26  Identities=23%  Similarity=0.547  Sum_probs=19.9

Q ss_pred             cCCcceeCCCcchhccChHHHHHHHH
Q psy10073        110 LGDKQFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       110 ~~~~~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      +|-+||.|.+|++.|....++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35678888888888888888888753

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=4.1e-06  Score=34.36  Aligned_cols=23  Identities=26%  Similarity=0.661  Sum_probs=13.0

Q ss_pred             ceeCCCcchhccChHHHHHHHHh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      ||.|..|+.+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45555555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.5e-06  Score=36.58  Aligned_cols=27  Identities=19%  Similarity=0.316  Sum_probs=17.8

Q ss_pred             cceeCCC--cchhccChHHHHHHH-HhhcC
Q psy10073        113 KQFKCCL--CSYGAYQKEKLQFHV-KNKHS  139 (144)
Q Consensus       113 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  139 (144)
                      +||.|..  |.+.|++.+....|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4666655  777777777777775 66654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=8.3e-06  Score=32.59  Aligned_cols=26  Identities=23%  Similarity=0.419  Sum_probs=24.1

Q ss_pred             eCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         88 ICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      .|+.|.+.|.++.-|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.86  E-value=7.1e-06  Score=33.55  Aligned_cols=25  Identities=20%  Similarity=0.287  Sum_probs=19.0

Q ss_pred             cceeCC--CcchhccChHHHHHHHHhh
Q psy10073        113 KQFKCC--LCSYGAYQKEKLQFHVKNK  137 (144)
Q Consensus       113 ~~~~C~--~C~~~f~~~~~l~~H~~~h  137 (144)
                      .||.|+  -|++.|+..+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467774  4888888888888888776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.85  E-value=3.5e-06  Score=35.45  Aligned_cols=20  Identities=15%  Similarity=0.316  Sum_probs=9.7

Q ss_pred             eeCCCCCcccCChhHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~  106 (144)
                      |.|.+|++.|...+.|.+|+
T Consensus         2 f~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             cccccccchhhHHHHHHHHH
Confidence            44444554444444444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=1e-05  Score=33.09  Aligned_cols=26  Identities=19%  Similarity=0.529  Sum_probs=13.7

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      .|.|..|...|...-.|+.|+-.|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            35555555555555555555555554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.81  E-value=7.8e-06  Score=32.15  Aligned_cols=24  Identities=17%  Similarity=0.438  Sum_probs=22.0

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.2e-05  Score=33.14  Aligned_cols=22  Identities=23%  Similarity=0.590  Sum_probs=10.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHh
Q psy10073         87 FICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      |.|..|.....+.++|..|+++
T Consensus         3 y~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHH
T ss_pred             ccccccccccccchhhhhhhhc
Confidence            4455555444444555544443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.73  E-value=1.9e-05  Score=35.31  Aligned_cols=29  Identities=21%  Similarity=0.372  Sum_probs=25.8

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhcCCc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHLGDK  113 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  113 (144)
                      +.|.|.+|++.|.+...|--|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            44999999999999999999999997654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=2.4e-05  Score=32.18  Aligned_cols=27  Identities=33%  Similarity=0.779  Sum_probs=24.3

Q ss_pred             cceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        113 KQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      +||.|..|....+..++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999999999999999997554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=2.6e-05  Score=34.64  Aligned_cols=28  Identities=25%  Similarity=0.447  Sum_probs=18.1

Q ss_pred             CCcceeC--CCcchhccChHHHHHHHHhhc
Q psy10073        111 GDKQFKC--CLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       111 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      .++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3566777  456777777777766666553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=4.3e-05  Score=31.21  Aligned_cols=27  Identities=26%  Similarity=0.487  Sum_probs=25.0

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcCC
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      .|.|..|...|.....|+.|+..|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            399999999999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.61  E-value=2e-05  Score=32.30  Aligned_cols=27  Identities=22%  Similarity=0.327  Sum_probs=16.0

Q ss_pred             ceeCC--CcchhccChHHHHHHHHhhcCC
Q psy10073        114 QFKCC--LCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       114 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      ||.|.  -|.+.|.+...|.+|.-+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            55553  3666666666666666666654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.61  E-value=1.5e-05  Score=33.52  Aligned_cols=26  Identities=19%  Similarity=0.437  Sum_probs=22.7

Q ss_pred             ceeCCCcchhccChHHHHHHHH-hhcC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVK-NKHS  139 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~-~h~~  139 (144)
                      ||.|.+|++.|+.+.-|.+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999965 4554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=4.3e-05  Score=30.82  Aligned_cols=26  Identities=31%  Similarity=0.590  Sum_probs=23.4

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      +||+|..|+..-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            34999999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=4.1e-05  Score=31.30  Aligned_cols=24  Identities=17%  Similarity=0.433  Sum_probs=21.9

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhh
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      ||.|..|+.+|.++.+|..|++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            499999999999999999999864

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=4.7e-05  Score=34.27  Aligned_cols=26  Identities=12%  Similarity=0.184  Sum_probs=22.1

Q ss_pred             CCCceeCCCCCcccCChhHHHHHHHh
Q psy10073         83 VKYKFICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      +-+||.|..|++.|...+++.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            34459999999999999999999753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=9.1e-05  Score=29.92  Aligned_cols=25  Identities=32%  Similarity=0.550  Sum_probs=16.8

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhc
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |-+|+.|..+.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3466777777777777777776664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.36  E-value=0.0001  Score=29.98  Aligned_cols=24  Identities=21%  Similarity=0.556  Sum_probs=21.4

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhh
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h  109 (144)
                      ||.|+.  |++.|..++.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            489965  999999999999999887

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=7.1e-05  Score=29.33  Aligned_cols=22  Identities=41%  Similarity=0.653  Sum_probs=18.0

Q ss_pred             ceeCCCcchhccChHHHHHHHH
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      ||+|..|...|.++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6888888888888888888864

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=6.4e-05  Score=31.51  Aligned_cols=26  Identities=15%  Similarity=0.336  Sum_probs=22.2

Q ss_pred             ceeCCC--CCcccCChhHHHHHH-HhhcC
Q psy10073         86 KFICVA--CDYFTIISQNMRNHT-LIHLG  111 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~-~~h~~  111 (144)
                      ||.|..  |.+.|++.+.-..|+ ++|..
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CccccCCChhhhhcchhhhhhhccccccC
Confidence            499977  999999999999997 77764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.21  E-value=0.00017  Score=29.50  Aligned_cols=27  Identities=26%  Similarity=0.544  Sum_probs=23.6

Q ss_pred             ceeCCC--CCcccCChhHHHHHHHhhcCC
Q psy10073         86 KFICVA--CDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        86 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      ||.|.+  |.+.|.+...|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            488855  999999999999999999875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00022  Score=29.14  Aligned_cols=26  Identities=27%  Similarity=0.464  Sum_probs=22.4

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      ||+|..|..-..+.++|..|++.-++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            49999999999999999999875443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00029  Score=32.81  Aligned_cols=25  Identities=20%  Similarity=0.295  Sum_probs=21.2

Q ss_pred             ceeCCCCCcccCChhHHHHHHHhhc
Q psy10073         86 KFICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      .|.|..|++.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999987774

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00048  Score=30.45  Aligned_cols=27  Identities=19%  Similarity=0.328  Sum_probs=23.2

Q ss_pred             CCceeC--CCCCcccCChhHHHHHHHhhc
Q psy10073         84 KYKFIC--VACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        84 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            455999  669999999999999988775

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.90  E-value=0.00048  Score=27.55  Aligned_cols=21  Identities=24%  Similarity=0.490  Sum_probs=14.8

Q ss_pred             eeCCCCCcccCChhHHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      |.|..||+.+-.+.+|..|..
T Consensus         2 f~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHH
Confidence            677777777777777776653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.00037  Score=27.88  Aligned_cols=23  Identities=30%  Similarity=0.531  Sum_probs=20.6

Q ss_pred             ceeCCCcchhccChHHHHHHHHh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      ||+|..||+.+-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00037  Score=32.41  Aligned_cols=25  Identities=20%  Similarity=0.347  Sum_probs=23.0

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhc
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      .|.|..|+|.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999998875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.0007  Score=28.94  Aligned_cols=26  Identities=19%  Similarity=0.397  Sum_probs=16.9

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      .|.|..|++.|..+..+.+|-..-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46677777777777777666554443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.65  E-value=0.00095  Score=26.11  Aligned_cols=22  Identities=27%  Similarity=0.338  Sum_probs=16.1

Q ss_pred             eeCCCCCcccCChhHHHHHHHh
Q psy10073         87 FICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6777777777777777777654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00066  Score=29.31  Aligned_cols=19  Identities=11%  Similarity=0.058  Sum_probs=9.9

Q ss_pred             hhccChHHHHHHHHhhcCC
Q psy10073        122 YGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       122 ~~f~~~~~l~~H~~~h~~~  140 (144)
                      +.|.....|..|+++|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3455555555555555553

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.0011  Score=25.76  Aligned_cols=22  Identities=14%  Similarity=0.566  Sum_probs=19.8

Q ss_pred             ceeCCCCCcccCChhHHHHHHH
Q psy10073         86 KFICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      ||+|..|...|.++..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4999999999999999999964

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0024  Score=25.63  Aligned_cols=25  Identities=28%  Similarity=0.438  Sum_probs=22.6

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      -+|++|..+-+++..|+.|.++|..
T Consensus         3 ekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             ccCcccccccCcHHHHHHhhccccC
Confidence            6899999999999999999998853

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0018  Score=27.88  Aligned_cols=21  Identities=14%  Similarity=-0.124  Sum_probs=18.1

Q ss_pred             CCcccCChhHHHHHHHhhcCC
Q psy10073         92 CDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        92 C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      =++.|.....|..|+++|+||
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            346799999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.08  E-value=0.0034  Score=24.45  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=21.5

Q ss_pred             eeCCCcchhccChHHHHHHHHhhc
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |.|+.|-+.|..+.++..|.++-+
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999988643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.004  Score=24.86  Aligned_cols=21  Identities=29%  Similarity=0.586  Sum_probs=10.9

Q ss_pred             eeCCCcchhccChHHHHHHHH
Q psy10073        115 FKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      |+|+.|+-....++.|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            445555555555555555544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0038  Score=26.59  Aligned_cols=25  Identities=24%  Similarity=0.417  Sum_probs=22.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLG  111 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~  111 (144)
                      |.|..|++.|.....+.+|...-.|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            9999999999999999999876655

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.71  E-value=0.0073  Score=27.83  Aligned_cols=27  Identities=22%  Similarity=0.439  Sum_probs=15.0

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhhc
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      +.|-.|++|+....+..+|.+|+..-+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            445556666555555556655555433

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.59  E-value=0.0054  Score=24.28  Aligned_cols=24  Identities=17%  Similarity=0.380  Sum_probs=16.8

Q ss_pred             eeC--CCcchhccChHHHHHHHHhhc
Q psy10073        115 FKC--CLCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       115 ~~C--~~C~~~f~~~~~l~~H~~~h~  138 (144)
                      |.|  +.|++.|.....|..|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  357778887777777777765

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.56  E-value=0.0048  Score=25.98  Aligned_cols=22  Identities=18%  Similarity=0.567  Sum_probs=17.3

Q ss_pred             ceeCCCCCcccCChhHHHHHHH
Q psy10073         86 KFICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      .|.|+-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            3788888888888888887753

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0082  Score=23.92  Aligned_cols=22  Identities=23%  Similarity=0.407  Sum_probs=20.5

Q ss_pred             eeCCCCCcccCChhHHHHHHHh
Q psy10073         87 FICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      |.|+.|+-....++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            8999999999999999999875

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0074  Score=30.08  Aligned_cols=36  Identities=17%  Similarity=0.360  Sum_probs=23.2

Q ss_pred             CCceeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcch
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSY  122 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  122 (144)
                      ...|.|+.|++.|+....+..   .-...-.|.|..|+-
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            344888888888876555432   333345688888874

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.0061  Score=24.47  Aligned_cols=20  Identities=10%  Similarity=0.160  Sum_probs=14.2

Q ss_pred             CcchhccChHHHHHHHHhhc
Q psy10073        119 LCSYGAYQKEKLQFHVKNKH  138 (144)
Q Consensus       119 ~C~~~f~~~~~l~~H~~~h~  138 (144)
                      -|++.|...+.++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            47777777777777777663

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.10  E-value=0.0034  Score=26.47  Aligned_cols=27  Identities=19%  Similarity=0.321  Sum_probs=22.8

Q ss_pred             ceecCccCCccCCccccccccCCCCCC
Q psy10073         15 KKTCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      .|.|.-||..|++.+.|..|.-..|.|
T Consensus         8 rf~c~pcgirfss~stleahqtyycsh   34 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAYYCSH   34 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTTTTCS
T ss_pred             ceeccccceeecChhHHHhhhheeeec
Confidence            589999999999999999976666655

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.63  E-value=0.015  Score=23.92  Aligned_cols=26  Identities=23%  Similarity=0.491  Sum_probs=14.2

Q ss_pred             eeC--CCCCcccCChhHHHHHHHhhcCC
Q psy10073         87 FIC--VACDYFTIISQNMRNHTLIHLGD  112 (144)
Q Consensus        87 ~~C--~~C~~~f~~~~~l~~H~~~h~~~  112 (144)
                      |.|  +.|+..|.....|..|+-.|+|+
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            555  33555555555566665555543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.0041  Score=31.58  Aligned_cols=25  Identities=28%  Similarity=0.405  Sum_probs=19.6

Q ss_pred             CCceeCCCCCcccCChhHHHHHHHh
Q psy10073         84 KYKFICVACDYFTIISQNMRNHTLI  108 (144)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~H~~~  108 (144)
                      ...|-|..|++.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3448888888888888888888754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.55  E-value=0.02  Score=23.50  Aligned_cols=28  Identities=25%  Similarity=0.439  Sum_probs=24.2

Q ss_pred             cceeCC--CcchhccChHHHHHHHHhhcCC
Q psy10073        113 KQFKCC--LCSYGAYQKEKLQFHVKNKHST  140 (144)
Q Consensus       113 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  140 (144)
                      +.|.|.  .|+..|...-.|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            467885  5999999999999999999986

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.0047  Score=31.37  Aligned_cols=23  Identities=17%  Similarity=0.411  Sum_probs=20.9

Q ss_pred             ceeCCCcchhccChHHHHHHHHh
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKN  136 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~  136 (144)
                      .|.|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            48999999999999999999764

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.77  E-value=0.015  Score=25.52  Aligned_cols=20  Identities=20%  Similarity=0.504  Sum_probs=10.3

Q ss_pred             CCCCCCccccCCCCCeeCCCCC
Q psy10073         36 CQTCPNMSFLNSVIPQSCKHCK   57 (144)
Q Consensus        36 c~~c~h~~~h~~~~~~~C~~C~   57 (144)
                      |.+||+.  +.++.|-.|++|+
T Consensus         8 C~vCGyi--~~g~~Pe~CPvCg   27 (36)
T d1yuza2           8 CPICGYI--HKGEDFEKCPICF   27 (36)
T ss_dssp             CSSSCCE--EESSCCSBCTTTC
T ss_pred             CCCCCCE--eeCCCCCcCCCCC
Confidence            4444443  2234555677776

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.13  E-value=0.077  Score=24.29  Aligned_cols=25  Identities=24%  Similarity=0.348  Sum_probs=21.3

Q ss_pred             CceeCCCCCcccCChhHHHHHHHhh
Q psy10073         85 YKFICVACDYFTIISQNMRNHTLIH  109 (144)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~H~~~h  109 (144)
                      .+-.|++|+....+..+|++|+..-
T Consensus        23 qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH
Confidence            3489999999999999999998653

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.00  E-value=0.067  Score=22.65  Aligned_cols=20  Identities=20%  Similarity=0.404  Sum_probs=10.7

Q ss_pred             eeCCCCCcccCChhHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~  106 (144)
                      |.|..|.+.+...+++-+|.
T Consensus         9 yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHH
Confidence            55555555555555555553

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=0.082  Score=21.24  Aligned_cols=21  Identities=24%  Similarity=0.461  Sum_probs=14.0

Q ss_pred             eeCCCCCcccCChhHHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      |.|..||+...+...+.-|+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            667777777776666666643

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.95  E-value=0.028  Score=24.85  Aligned_cols=20  Identities=25%  Similarity=0.738  Sum_probs=10.7

Q ss_pred             CCCCCCccccCCCCCeeCCCCC
Q psy10073         36 CQTCPNMSFLNSVIPQSCKHCK   57 (144)
Q Consensus        36 c~~c~h~~~h~~~~~~~C~~C~   57 (144)
                      |.+||+.-.  ++.|-.|++|+
T Consensus         8 C~vCG~i~~--g~~P~~CPvCg   27 (37)
T d1nnqa2           8 CPICGYTAV--DEAPEYCPVCG   27 (37)
T ss_dssp             CTTTCCEEE--SCCCSBCTTTC
T ss_pred             CCCCCCEec--CCCCCcCCCCC
Confidence            444444322  34566677777

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=92.46  E-value=0.064  Score=25.67  Aligned_cols=17  Identities=24%  Similarity=0.380  Sum_probs=11.1

Q ss_pred             CceecCccCCccCCccc
Q psy10073         14 TKKTCLYCNKYVPSDID   30 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~   30 (144)
                      +.|.|..||..+.-...
T Consensus         2 ~ky~C~~CgyiYd~~~G   18 (53)
T d1iroa_           2 KKYTCTVCGYIYNPEDG   18 (53)
T ss_dssp             CCEEETTTCCEECTTTC
T ss_pred             CCeEcCCCCcEECcccC
Confidence            35778888777765443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.03  Score=27.70  Aligned_cols=24  Identities=25%  Similarity=0.454  Sum_probs=13.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHL  110 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~  110 (144)
                      |.|..|+..|.+...|..|+..|.
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhcc
Confidence            555555555555555555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.1  Score=20.98  Aligned_cols=26  Identities=23%  Similarity=0.539  Sum_probs=21.7

Q ss_pred             ceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      .|.|..||+...+...+.-|...-+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47899999999999999999765443

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.02  E-value=0.034  Score=30.55  Aligned_cols=40  Identities=18%  Similarity=0.390  Sum_probs=25.0

Q ss_pred             hhhhhhhcCCCC----CceecCccCCccCCccccccccCCCCCCccccCCCCCeeCCCCC-CC
Q psy10073          2 EHWEQCLLVPLS----TKKTCLYCNKYVPSDIDVFIGHCQTCPNMSFLNSVIPQSCKHCK-NF   59 (144)
Q Consensus         2 ~~~~~~~~~~~~----~~~~C~~C~~~f~~~~~l~~H~c~~c~h~~~h~~~~~~~C~~C~-~f   59 (144)
                      +|.+.-+...+.    .|=.|..||.+|..  .+                .+|-.|+.|. .+
T Consensus        50 eHIakslkr~g~~L~v~Pp~CrkCGfvFr~--~~----------------kkPSRCP~CKSE~   94 (105)
T d2gmga1          50 KVISKIAKREGMVLLIKPAQCRKCGFVFKA--EI----------------NIPSRCPKCKSEW   94 (105)
T ss_dssp             HHHHHHHTTTTEEEEECCCBBTTTCCBCCC--CS----------------SCCSSCSSSCCCC
T ss_pred             HHHHHHHhcCCCeEEEeChhhhhcCCeecc--cC----------------CCCCCCCCCCCcc
Confidence            455555544332    25689999999942  22                3477899998 54

>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.97  E-value=0.075  Score=25.39  Aligned_cols=15  Identities=27%  Similarity=0.441  Sum_probs=9.9

Q ss_pred             ceecCccCCccCCcc
Q psy10073         15 KKTCLYCNKYVPSDI   29 (144)
Q Consensus        15 ~~~C~~C~~~f~~~~   29 (144)
                      .|.|..||..+....
T Consensus         2 ky~C~~CgyiYd~~~   16 (53)
T d1brfa_           2 KWVCKICGYIYDEDA   16 (53)
T ss_dssp             EEEETTTCCEEETTT
T ss_pred             ceECCCCCcEECccc
Confidence            477777777765543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.83  E-value=0.083  Score=21.15  Aligned_cols=18  Identities=22%  Similarity=0.168  Sum_probs=14.9

Q ss_pred             CCcchhccChHHHHHHHH
Q psy10073        118 CLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       118 ~~C~~~f~~~~~l~~H~~  135 (144)
                      +-||+.|+++..|+.|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            458999999988888876

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=90.19  E-value=0.094  Score=25.34  Aligned_cols=16  Identities=19%  Similarity=0.478  Sum_probs=10.7

Q ss_pred             CceecCccCCccCCcc
Q psy10073         14 TKKTCLYCNKYVPSDI   29 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~   29 (144)
                      +.|.|..||..+.-..
T Consensus         3 kky~C~~CgyiYdp~~   18 (56)
T d1s24a_           3 LKWICITCGHIYDEAL   18 (56)
T ss_dssp             CEEEETTTTEEEETTS
T ss_pred             ccEECCCCCcEECccc
Confidence            4678888887765443

>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio gigas [TaxId: 879]

Probab=89.68  E-value=0.16  Score=24.10  Aligned_cols=17  Identities=12%  Similarity=0.165  Sum_probs=10.7

Q ss_pred             CceecCccCCccCCccc
Q psy10073         14 TKKTCLYCNKYVPSDID   30 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~~   30 (144)
                      ..|.|..||..+.-...
T Consensus         2 ~~y~C~~CgyiYdp~~G   18 (52)
T d2dsxa1           2 DIYVCTVCGYEYDPAKG   18 (52)
T ss_dssp             CCEEETTTCCEECTTTC
T ss_pred             CeEEeCCCCeEECcccC
Confidence            35777777777655443

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=89.61  E-value=0.17  Score=23.25  Aligned_cols=14  Identities=21%  Similarity=0.339  Sum_probs=9.6

Q ss_pred             CceecCccCCccCC
Q psy10073         14 TKKTCLYCNKYVPS   27 (144)
Q Consensus        14 ~~~~C~~C~~~f~~   27 (144)
                      +.|.|..||..+..
T Consensus         2 ~~y~C~~CgyiYd~   15 (45)
T d6rxna_           2 QKYVCNVCGYEYDP   15 (45)
T ss_dssp             CCEEETTTCCEECG
T ss_pred             CCeEeCCCCeEECc
Confidence            35778888877654

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=89.60  E-value=0.036  Score=24.47  Aligned_cols=32  Identities=9%  Similarity=-0.209  Sum_probs=20.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ  126 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  126 (144)
                      +.|+.||..|.        +........-.|+.||....+
T Consensus         3 ~vc~~cG~~Yh--------~~~~pPk~~g~CD~cg~~L~q   34 (37)
T d2ak3a2           3 WIHPGSGRVYN--------IEFNPPKTMGIDDLTGEPLVQ   34 (37)
T ss_dssp             EEETTTTEEEE--------TTTBCCSSTTBCTTTCCBCBC
T ss_pred             eeeCCcCChhh--------hccCCccccCCccCCCCcCEe
Confidence            67888888774        333344455778888865544

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.74  E-value=0.24  Score=20.94  Aligned_cols=22  Identities=27%  Similarity=0.425  Sum_probs=12.5

Q ss_pred             ceeCCCcchhccChHHHHHHHH
Q psy10073        114 QFKCCLCSYGAYQKEKLQFHVK  135 (144)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~  135 (144)
                      -|.|+.|-+-..+...|.+|+.
T Consensus         7 LyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           7 LYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeehhhhhhhCCHHHHHHHHH
Confidence            3555556555555555555553

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.27  E-value=0.16  Score=25.02  Aligned_cols=28  Identities=14%  Similarity=0.386  Sum_probs=23.5

Q ss_pred             CcceeCCCcchhccChHHHHHHHHhhcC
Q psy10073        112 DKQFKCCLCSYGAYQKEKLQFHVKNKHS  139 (144)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (144)
                      ...|+|..|.-.|.+...|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            4569999999999999999999888763

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.07  E-value=0.062  Score=23.80  Aligned_cols=32  Identities=13%  Similarity=-0.032  Sum_probs=20.8

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhccC
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGAYQ  126 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  126 (144)
                      +.|+.||..|..        .......+-.|+.||..+.+
T Consensus         3 r~C~~cG~~Yh~--------~~~ppk~~g~CD~cg~~L~q   34 (38)
T d1akya2           3 LIHPASGRSYHK--------IFNPPKEDMKDDVTGEALVQ   34 (38)
T ss_dssp             EECTTTCCEEET--------TTBCCSSTTBCTTTCCBCBC
T ss_pred             cCCcCccchhhh--------hccCcCcCCccCCCCCEeee
Confidence            678888888743        33333445678888866544

>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: variant PHD-like domain
domain: Hypothetical protein KIAA1045
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.26  E-value=0.96  Score=23.38  Aligned_cols=17  Identities=18%  Similarity=0.444  Sum_probs=12.8

Q ss_pred             CCCCCeeCCCCC-CCcch
Q psy10073         46 NSVIPQSCKHCK-NFTSS   62 (144)
Q Consensus        46 ~~~~~~~C~~C~-~f~~~   62 (144)
                      .++..|+|.+|+ .|.+.
T Consensus        25 t~~~l~pCRvCtRv~H~~   42 (89)
T d1wila_          25 TAESLFPCRVCTRVFHDG   42 (89)
T ss_dssp             CSSCCSSCSSSSSCCCHH
T ss_pred             cccceecceeecchhhHH
Confidence            345567899999 88777

>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.82  E-value=0.086  Score=22.86  Aligned_cols=29  Identities=24%  Similarity=0.356  Sum_probs=19.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG  123 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  123 (144)
                      +.|+.|+..|..        .......+-.|+.||..
T Consensus         3 r~C~~CG~~Yh~--------~~~pPk~~g~CD~cG~~   31 (35)
T d1zina2           3 RICRNCGATYHL--------IFHPPAKPGVCDKCGGE   31 (35)
T ss_dssp             EEETTTCCEEET--------TTBCCSSTTBCTTTCCB
T ss_pred             cCCcCcCchhcc--------ccCCCCCCCcCCCCCCC
Confidence            678888888743        22334455678888754

>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus globisporus [TaxId: 1459]

Probab=85.94  E-value=0.1  Score=22.62  Aligned_cols=29  Identities=21%  Similarity=0.187  Sum_probs=19.4

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG  123 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  123 (144)
                      +.|+.|+..|..        ........-.|+.||..
T Consensus         3 ~~C~~CG~~Yh~--------~~~pPk~~g~CD~cg~~   31 (35)
T d1s3ga2           3 RICKVCGTSYHL--------LFNPPQVEGKCDKDGGE   31 (35)
T ss_dssp             EEETTTCCEEET--------TTBCCSBTTBCTTTCCB
T ss_pred             cCCcCcCchhcc--------ccCCCCCCCccCCCCCC
Confidence            788889888743        23334455678888754

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.60  E-value=0.61  Score=18.56  Aligned_cols=15  Identities=20%  Similarity=0.399  Sum_probs=7.7

Q ss_pred             cchhccChHHHHHHH
Q psy10073        120 CSYGAYQKEKLQFHV  134 (144)
Q Consensus       120 C~~~f~~~~~l~~H~  134 (144)
                      |+..|..+.++..|.
T Consensus        10 cdl~fttkanmkkhf   24 (31)
T d1tf3a3          10 CDLRFTTKANMKKHF   24 (31)
T ss_dssp             CCCEESSHHHHHHHH
T ss_pred             cceEEeehHHHHHHH
Confidence            555555555555553

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.44  E-value=0.2  Score=24.80  Aligned_cols=27  Identities=30%  Similarity=0.653  Sum_probs=18.2

Q ss_pred             CCceecCccCCccCCccccccccCCCCCC
Q psy10073         13 STKKTCLYCNKYVPSDIDVFIGHCQTCPN   41 (144)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~c~~c~h   41 (144)
                      ...-.|..|+..|..  ...+|+|..||.
T Consensus         6 ~~~~~C~~C~~~F~~--~~rrHHCR~CG~   32 (64)
T d1joca1           6 NEVQNCMACGKGFSV--TVRRHHCRQCGN   32 (64)
T ss_dssp             GGCCBCTTTCCBCCS--SSCCEECTTTCC
T ss_pred             ccCCcCcCcCCcccC--CccccchhhhCC
Confidence            334579999999964  245666666665

>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Guillardia theta [TaxId: 55529]

Probab=84.83  E-value=0.48  Score=23.84  Aligned_cols=16  Identities=19%  Similarity=0.312  Sum_probs=10.7

Q ss_pred             CceecCccCCccCCcc
Q psy10073         14 TKKTCLYCNKYVPSDI   29 (144)
Q Consensus        14 ~~~~C~~C~~~f~~~~   29 (144)
                      ..|.|..||..+.-..
T Consensus         6 ~ky~C~~CgyiYDp~~   21 (70)
T d1dx8a_           6 GKYECEACGYIYEPEK   21 (70)
T ss_dssp             SCEEETTTCCEECTTT
T ss_pred             CeEEcCCCCeEECccc
Confidence            3578888887765443

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=0.2  Score=21.38  Aligned_cols=21  Identities=19%  Similarity=0.360  Sum_probs=16.4

Q ss_pred             eeCCCCCcccCChhHHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~  107 (144)
                      ..|.+|-+.|.+..++.+|+.
T Consensus         4 ltclecmrtfkssfsiwrhqv   24 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQV   24 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhhh
Confidence            678888888888888888864

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.11  E-value=0.61  Score=19.84  Aligned_cols=20  Identities=20%  Similarity=0.338  Sum_probs=11.5

Q ss_pred             eCCCCCcccCChhHHHHHHH
Q psy10073         88 ICVACDYFTIISQNMRNHTL  107 (144)
Q Consensus        88 ~C~~C~~~f~~~~~l~~H~~  107 (144)
                      -|..|+-.|.....++.|.+
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHH
T ss_pred             HHhhCCceehhHHHHHHHHH
Confidence            35566666666666655543

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.26  E-value=0.33  Score=22.23  Aligned_cols=20  Identities=20%  Similarity=0.341  Sum_probs=17.7

Q ss_pred             eeCCCCCcccCChhHHHHHH
Q psy10073         87 FICVACDYFTIISQNMRNHT  106 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~  106 (144)
                      -.|..|+..|+...+++.|+
T Consensus         7 ~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccCcccceeeeeecchHhhh
Confidence            58999999999999998886

>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Escherichia coli [TaxId: 562]

Probab=80.28  E-value=0.2  Score=21.60  Aligned_cols=29  Identities=3%  Similarity=-0.192  Sum_probs=18.0

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchh
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYG  123 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  123 (144)
                      ..|+.||..|..        ......+.-.|+.||..
T Consensus         3 r~c~~cG~~Yh~--------~~~PPk~~g~CD~cg~~   31 (35)
T d1e4va2           3 RVHAPSGRVYHV--------KFNPPKVEGKDDVTGEE   31 (35)
T ss_dssp             EEETTTTEEEET--------TTBCCSSTTBCTTTCCB
T ss_pred             cCCcCcCChhhh--------ccCccccCCcccCCCCE
Confidence            678888887733        33333445678888754

>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: CHY zinc finger-like
superfamily: CHY zinc finger-like
family: CHY zinc finger
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.25  E-value=0.69  Score=23.41  Aligned_cols=23  Identities=26%  Similarity=0.491  Sum_probs=14.7

Q ss_pred             eeCCCCCcccCChhHHHHHHHhhcCCcceeCCCcchhc
Q psy10073         87 FICVACDYFTIISQNMRNHTLIHLGDKQFKCCLCSYGA  124 (144)
Q Consensus        87 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  124 (144)
                      +.|..|+....               .+-.|+.||..|
T Consensus        52 l~CH~Cg~~~~---------------~~~~C~~Cgs~F   74 (74)
T d2dkta1          52 VQCINCEKLQH---------------AQQTCEDCSTLF   74 (74)
T ss_dssp             EEESSSCCEEC---------------SCSBCSSSCCBS
T ss_pred             EEeccCCCccc---------------CCCcCCCCCCCC
Confidence            78888876532               233577777655