Psyllid ID: psy10185


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
SNIACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSAISWTIFE
ccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHEEcHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccHHHHHHHccccHHccccHHHHHHHHHHHHEEEEEcc
ccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHcccHHHHccccHHHHccccEEEEEEEEEc
SNIACPVVWINigdsvhyspprspiLHALLsgsisgtvstilLQPLDVIKTRlqsnhskafhyDSLRQALVHIFRTeglkglwsgtvatlvrdapysglhfmfytqaksfkptglnettpgyVLFQLAcggaagatatlvtqpadIIKTRIQltcqspatsslkyadygvlgfvQGFVPRMLKRTLMSAISWTIFE
SNIACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSaiswtife
SNIACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLacggaagatatLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSAISWTIFE
**IACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSAISWTIF*
****CPVVWI**************ILHALLSGSISGTVSTILLQPLDVIKTRLQSNH******DSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKP******T**YVLFQLACGGAAGATATLVTQPADIIKTRIQL**********KYADYGVLGFVQGFVPRMLKRTLMSAISWTIFE
SNIACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSAISWTIFE
*NIACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSAISWTIFE
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SNIACPVVWINIGDSVHYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTCQSPATSSLKYADYGVLGFVQGFVPRMLKRTLMSAISWTIFE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query196 2.2.26 [Sep-21-2011]
Q6DJ08302 Solute carrier family 25 yes N/A 0.892 0.579 0.413 9e-33
Q6DE75302 Solute carrier family 25 N/A N/A 0.892 0.579 0.413 8e-32
Q499U1326 Solute carrier family 25 yes N/A 0.877 0.527 0.417 2e-31
Q5EAC0306 Solute carrier family 25 yes N/A 0.877 0.562 0.417 3e-31
Q96DW6304 Solute carrier family 25 yes N/A 0.872 0.562 0.419 4e-31
B2MVX9306 Solute carrier family 25 N/A N/A 0.862 0.552 0.416 6e-31
Q91XD8326 Solute carrier family 25 yes N/A 0.862 0.518 0.405 3e-30
P0CAT2287 Solute carrier family 25 yes N/A 0.897 0.613 0.416 5e-30
Q08CI8287 Solute carrier family 25 no N/A 0.897 0.613 0.378 1e-29
B2VSU4318 Solute carrier family 25 N/A N/A 0.826 0.509 0.365 1e-21
>sp|Q6DJ08|S2538_XENTR Solute carrier family 25 member 38 OS=Xenopus tropicalis GN=slc25a38 PE=2 SV=1 Back     alignment and function desciption
 Score =  139 bits (351), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 11/186 (5%)

Query: 17  HYSPPRSPI-LHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFR 75
           H+   R P  L +++ G+ S TV+ + + P  V+KTR +S     + Y S+  AL +I++
Sbjct: 112 HFFSERDPKPLESVMLGAGSRTVAAVCMLPFTVVKTRYESGK---YGYKSVYGALKNIYK 168

Query: 76  TEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYV-LFQLACGGAAG 134
           TEG +GL+SG  ATL+RDAP+SG++ MFYT+AK   P   ++  P +  +    CG  AG
Sbjct: 169 TEGPRGLFSGLTATLMRDAPFSGIYLMFYTRAKKLVPQ--DQIDPLFSPVLNFGCGIVAG 226

Query: 135 ATATLVTQPADIIKTRIQLT---CQSPATSSLK-YADYGVLGFVQGFVPRMLKRTLMSAI 190
             A++ TQPAD+IKT IQL+   C      +L  Y ++G+ GF +G +PR L+RTLM+A+
Sbjct: 227 ILASVATQPADVIKTHIQLSHEKCHWTGQVALNIYQNHGLTGFFRGGLPRALRRTLMAAM 286

Query: 191 SWTIFE 196
           +WT++E
Sbjct: 287 AWTVYE 292




Mitochondrial carrier required during erythropoiesis. Probably involved in the biosynthesis of heme, possibly by facilitating 5-aminolevulinate (ALA) production. May act by importing glycine into mitochondria or by exchanging glycine for ALA across the mitochondrial inner membrane.
Xenopus tropicalis (taxid: 8364)
>sp|Q6DE75|S2538_XENLA Solute carrier family 25 member 38 OS=Xenopus laevis GN=slc25a38 PE=2 SV=1 Back     alignment and function description
>sp|Q499U1|S2538_RAT Solute carrier family 25 member 38 OS=Rattus norvegicus GN=Slc25a38 PE=2 SV=1 Back     alignment and function description
>sp|Q5EAC0|S2538_BOVIN Solute carrier family 25 member 38 OS=Bos taurus GN=SLC25A38 PE=2 SV=2 Back     alignment and function description
>sp|Q96DW6|S2538_HUMAN Solute carrier family 25 member 38 OS=Homo sapiens GN=SLC25A38 PE=1 SV=1 Back     alignment and function description
>sp|B2MVX9|S2538_SHEEP Solute carrier family 25 member 38 OS=Ovis aries GN=SLC25A38 PE=2 SV=1 Back     alignment and function description
>sp|Q91XD8|S2538_MOUSE Solute carrier family 25 member 38 OS=Mus musculus GN=Slc25a38 PE=2 SV=1 Back     alignment and function description
>sp|P0CAT2|S238B_DANRE Solute carrier family 25 member 38-B OS=Danio rerio GN=slc25a38b PE=2 SV=1 Back     alignment and function description
>sp|Q08CI8|S238A_DANRE Solute carrier family 25 member 38-A OS=Danio rerio GN=slc25a38a PE=2 SV=1 Back     alignment and function description
>sp|B2VSU4|S2538_PYRTR Solute carrier family 25 member 38 homolog OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_00728 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
427793753183 Putative mitochondrial carrier protein, 0.887 0.950 0.451 1e-33
449492899281 PREDICTED: solute carrier family 25 memb 0.867 0.604 0.447 4e-33
344288105 703 PREDICTED: hypothetical protein LOC10065 0.846 0.236 0.443 1e-32
449269999280 Solute carrier family 25 member 38, part 0.867 0.607 0.441 1e-32
345482336284 PREDICTED: solute carrier family 25 memb 0.908 0.626 0.435 2e-32
345482338296 PREDICTED: solute carrier family 25 memb 0.903 0.597 0.437 2e-32
307202014284 Solute carrier family 25 member 38 [Harp 0.846 0.584 0.437 6e-32
296399393281 solute carrier family 25, member 38 [Zon 0.862 0.601 0.439 7e-32
383854953 298 PREDICTED: solute carrier family 25 memb 0.908 0.597 0.413 8e-32
332376855 316 unknown [Dendroctonus ponderosae] 0.897 0.556 0.432 1e-31
>gi|427793753|gb|JAA62328.1| Putative mitochondrial carrier protein, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 119/184 (64%), Gaps = 10/184 (5%)

Query: 17  HYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRT 76
           H   P S    A+  G+ +  +  ++L P+ VIKTR +S   + +HY ++ +A   I+RT
Sbjct: 1   HLDNPSSS--EAMFLGASARAICGVVLLPVTVIKTRFES---EVYHYRTMSEATRDIYRT 55

Query: 77  EGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGAT 136
            GL+GL+SG V TLVRDAPYSG++ +FY QAK F P  + E +   V     CG AAG  
Sbjct: 56  SGLRGLYSGLVPTLVRDAPYSGIYLVFYVQAKRFVPERVKEGS-HLVAANFMCGVAAGLL 114

Query: 137 ATLVTQPADIIKTRIQL---TCQSPATSSLKYA-DYGVLGFVQGFVPRMLKRTLMSAISW 192
           A+LVTQPAD+IKT +QL     +S  TS L  A + GV+G+ +G VPRML+RTL++A++W
Sbjct: 115 ASLVTQPADVIKTHMQLQPAKFRSILTSILLIAKEEGVVGYFRGLVPRMLRRTLVTAMAW 174

Query: 193 TIFE 196
           + +E
Sbjct: 175 SFYE 178




Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449492899|ref|XP_002196790.2| PREDICTED: solute carrier family 25 member 38 [Taeniopygia guttata] Back     alignment and taxonomy information
>gi|344288105|ref|XP_003415791.1| PREDICTED: hypothetical protein LOC100655469 [Loxodonta africana] Back     alignment and taxonomy information
>gi|449269999|gb|EMC80728.1| Solute carrier family 25 member 38, partial [Columba livia] Back     alignment and taxonomy information
>gi|345482336|ref|XP_001608024.2| PREDICTED: solute carrier family 25 member 38-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345482338|ref|XP_003424578.1| PREDICTED: solute carrier family 25 member 38-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307202014|gb|EFN81578.1| Solute carrier family 25 member 38 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|296399393|gb|ADH10515.1| solute carrier family 25, member 38 [Zonotrichia albicollis] gi|296399427|gb|ADH10544.1| solute carrier family 25, member 38 [Zonotrichia albicollis] Back     alignment and taxonomy information
>gi|383854953|ref|XP_003702984.1| PREDICTED: solute carrier family 25 member 38-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332376855|gb|AEE63567.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
UNIPROTKB|F1NIF6300 SLC25A38 "Uncharacterized prot 0.867 0.566 0.397 4.4e-29
UNIPROTKB|Q6DJ08302 slc25a38 "Solute carrier famil 0.897 0.582 0.394 9.1e-29
UNIPROTKB|Q6DE75302 slc25a38 "Solute carrier famil 0.897 0.582 0.394 8.2e-28
UNIPROTKB|F1PFC9306 SLC25A38 "Uncharacterized prot 0.877 0.562 0.384 8.2e-28
UNIPROTKB|Q96DW6304 SLC25A38 "Solute carrier famil 0.872 0.562 0.397 1.3e-27
RGD|1311914326 Slc25a38 "solute carrier famil 0.877 0.527 0.390 1.7e-27
UNIPROTKB|Q499U1326 Slc25a38 "Solute carrier famil 0.877 0.527 0.390 1.7e-27
UNIPROTKB|E1B7P9328 SLC25A38 "Solute carrier famil 0.877 0.524 0.390 2.2e-27
UNIPROTKB|E1BA09328 SLC25A38 "Solute carrier famil 0.877 0.524 0.390 2.2e-27
UNIPROTKB|Q5EAC0306 SLC25A38 "Solute carrier famil 0.877 0.562 0.390 2.2e-27
UNIPROTKB|F1NIF6 SLC25A38 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 72/181 (39%), Positives = 111/181 (61%)

Query:    22 RSPI-LHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLK 80
             RSP  L +++ G+ +  +S I + P+ V+KTR +S     F Y S+  AL  I++TEG +
Sbjct:   115 RSPTALESVILGATARAISGICMLPVTVVKTRYESGR---FGYGSVYGALRSIYQTEGAR 171

Query:    81 GLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYV-LFQLXXXXXXXXXXXL 139
             G++SG  ATL+RDAP+SG++ MFYTQ K   P   ++  P  + +              L
Sbjct:   172 GMFSGLTATLLRDAPFSGIYLMFYTQTKKLTPQ--DQLDPVLMPVVNFGCGIFAGILASL 229

Query:   140 VTQPADIIKTRIQLTCQSPATSSLK----YADYGVLGFVQGFVPRMLKRTLMSAISWTIF 195
              TQPAD+IKT +QL+ +    +S      Y D+G++GF +G VPR L+RTLM+A++WT++
Sbjct:   230 ATQPADVIKTHMQLSPEKYRRTSQAIAFIYKDFGLVGFFRGGVPRALRRTLMAAMAWTVY 289

Query:   196 E 196
             E
Sbjct:   290 E 290


GO:0006810 "transport" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0030218 "erythrocyte differentiation" evidence=IEA
UNIPROTKB|Q6DJ08 slc25a38 "Solute carrier family 25 member 38" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DE75 slc25a38 "Solute carrier family 25 member 38" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|F1PFC9 SLC25A38 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q96DW6 SLC25A38 "Solute carrier family 25 member 38" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1311914 Slc25a38 "solute carrier family 25, member 38" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q499U1 Slc25a38 "Solute carrier family 25 member 38" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1B7P9 SLC25A38 "Solute carrier family 25 member 38" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BA09 SLC25A38 "Solute carrier family 25 member 38" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5EAC0 SLC25A38 "Solute carrier family 25 member 38" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6CNY8S2538_KLULANo assigned EC number0.32350.91830.6122yesN/A
P0CAT2S238B_DANRENo assigned EC number0.41620.89790.6132yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-26
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-13
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 9e-09
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-07
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 4e-06
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 96.9 bits (242), Expect = 2e-26
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 22  RSPILHALLSGSISGTVSTILLQPLDVIKTRLQSN-HSKAFHYDSLRQALVHIFRTEGLK 80
               L +LL+G I+G ++  +  PLDV+KTRLQS+    +  Y  +      I++ EG++
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIR 61

Query: 81  GLWSGTVATLVRDAPYSGLHFMFYTQAKSF 110
           GL+ G +  L+R AP + ++F  Y   K  
Sbjct: 62  GLYKGLLPNLLRVAPAAAIYFGTYETLKKL 91


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 196
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
KOG0762|consensus311 100.0
KOG0764|consensus 299 100.0
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0764|consensus299 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0752|consensus 320 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760|consensus 302 100.0
KOG0760|consensus302 100.0
KOG0758|consensus297 100.0
KOG0757|consensus319 100.0
KOG0768|consensus323 100.0
KOG0759|consensus286 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758|consensus 297 100.0
KOG0762|consensus 311 100.0
KOG0753|consensus 317 100.0
KOG0754|consensus 294 99.98
KOG0757|consensus 319 99.98
KOG0754|consensus294 99.98
KOG0761|consensus361 99.97
KOG0763|consensus301 99.97
KOG0759|consensus 286 99.97
KOG0751|consensus 694 99.97
KOG0770|consensus 353 99.97
KOG0750|consensus304 99.97
KOG0756|consensus299 99.97
KOG0761|consensus 361 99.97
KOG0766|consensus 297 99.96
KOG0751|consensus694 99.96
KOG0766|consensus297 99.96
KOG0765|consensus333 99.96
KOG0767|consensus 333 99.96
KOG0769|consensus 308 99.95
KOG0755|consensus320 99.95
KOG0765|consensus 333 99.95
KOG0036|consensus463 99.95
KOG0036|consensus 463 99.94
KOG0749|consensus298 99.94
KOG0768|consensus 323 99.94
KOG0763|consensus 301 99.93
KOG0770|consensus353 99.93
KOG0755|consensus 320 99.93
KOG0749|consensus298 99.92
KOG0750|consensus 304 99.92
KOG0767|consensus333 99.91
KOG0756|consensus 299 99.87
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.68
KOG2745|consensus 321 99.65
KOG1519|consensus297 99.62
KOG2954|consensus427 99.61
KOG0769|consensus308 99.54
KOG1519|consensus 297 99.47
KOG2745|consensus321 99.4
KOG2954|consensus427 98.43
>KOG0752|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-39  Score=254.00  Aligned_cols=173  Identities=31%  Similarity=0.495  Sum_probs=156.8

Q ss_pred             CChHHHHHHHHHHHHHHHhhhcChHHHHHHHHHcCCCCCCCCCcHHHHHHHHHHhhchhhhhcchhhhHHHHhcchhHHH
Q psy10185         22 RSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHF  101 (196)
Q Consensus        22 ~~~~~~~~~~g~~a~~~~~~v~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~  101 (196)
                      ..+...++++|++||+++.++++|+|++|+|+-.+.. ...|++..+++++|+++||++|||||+.|++++-+|+.++.|
T Consensus       123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~-~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F  201 (320)
T KOG0752|consen  123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE-LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINF  201 (320)
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc-cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHH
Confidence            5677888999999999999999999999999988743 337899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCchhHHHHHHHhHHHHhHhhhcchHHHHHHhHhhcc----------CCc-hhhhhHHHhcc
Q psy10185        102 MFYTQAKSF-KPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTC----------QSP-ATSSLKYADYG  169 (196)
Q Consensus       102 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~~~ik~r~~~~~----------~~~-~~~~~i~~~~G  169 (196)
                      .+||.+|+. ..... ..+....+.++++|.+||+++..+++|+|+||.|||...          .|+ +|+++|+++||
T Consensus       202 ~~Yd~lk~~~~~~~~-~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG  280 (320)
T KOG0752|consen  202 FAYDTLKKWQYLKSS-GNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEG  280 (320)
T ss_pred             HHHHHHHHhhccccc-ccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhh
Confidence            999999994 33331 112233889999999999999999999999999999988          378 99999999999


Q ss_pred             ccccccchhHHHHHHHhhhceeeeecC
Q psy10185        170 VLGFVQGFVPRMLKRTLMSAISWTIFE  196 (196)
Q Consensus       170 ~~gly~G~~~~~~~~~~~~~~~~~~ye  196 (196)
                      ++|||||+.|++++.+|+.++.|.+||
T Consensus       281 ~~gLYkGl~p~~lK~~P~~ai~F~~Ye  307 (320)
T KOG0752|consen  281 VKGLYKGLSPNLLKVVPSVAISFTTYE  307 (320)
T ss_pred             hhhhhccccHHHHHhcccceeeeehHH
Confidence            999999999999999999999999998



>KOG0753|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-08
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 17/202 (8%) Query: 8 VWINIGDSVHY----SPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNH--SKAF 61 V I + DSV + I LL+GS +G ++ + QP DV+K R Q+ Sbjct: 83 VRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR 142 Query: 62 HYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKS--FKPTGLNETT 119 Y S +A I R EG++GLW GT + R+A + + Y K K + + Sbjct: 143 RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDL 202 Query: 120 PGYVLFQLXXXXXXXXXXXLVTQPADIIKTRIQLTCQSPATSSLKYA-----DYGVLGFV 174 P + ++ P D++KTR + S+ A G F Sbjct: 203 PCH----FTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFY 258 Query: 175 QGFVPRMLKRTLMSAISWTIFE 196 +GF+P L+ + + + +E Sbjct: 259 KGFMPSFLRLGSWNVVMFVTYE 280
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-37
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-34
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-32
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 4e-29
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-18
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 9e-08
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  128 bits (325), Expect = 7e-37
 Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 18/193 (9%)

Query: 17  HYSPPRSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAF---HYDSLRQALVHI 73
            +          L SG  +G  S   + PLD  +TRL ++  K      +  L   +  I
Sbjct: 104 RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI 163

Query: 74  FRTEGLKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAA 133
           F+++GL+GL+ G   ++     Y   +F  Y  AK      L +    +++         
Sbjct: 164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM----LPDPKNVHIIVSWMIAQTV 219

Query: 134 GATATLVTQPADIIKTRIQLTCQSPA-----TSSLK-----YADYGVLGFVQGFVPRMLK 183
            A A LV+ P D ++ R+ +           T ++        D G   F +G    +L 
Sbjct: 220 TAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL- 278

Query: 184 RTLMSAISWTIFE 196
           R +  A    +++
Sbjct: 279 RGMGGAFVLVLYD 291


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=8.6e-39  Score=253.75  Aligned_cols=173  Identities=26%  Similarity=0.408  Sum_probs=157.6

Q ss_pred             CChHHHHHHHHHHHHHHHhhhcChHHHHHHHHHcCCC--CCCCCCcHHHHHHHHHHhhchhhhhcchhhhHHHHhcchhH
Q psy10185         22 RSPILHALLSGSISGTVSTILLQPLDVIKTRLQSNHS--KAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGL   99 (196)
Q Consensus        22 ~~~~~~~~~~g~~a~~~~~~v~~Pld~vk~~~q~~~~--~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~   99 (196)
                      ..+....+++|++||+++.++++|+|++|+|+|++..  ....|++.++++++|+++||++|||||+.+++++.++..++
T Consensus       101 ~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i  180 (303)
T 2lck_A          101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA  180 (303)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHH
Confidence            3567788999999999999999999999999999753  24468999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCchhHHHHHHHhHHHHhHhhhcchHHHHHHhHhhcc----CCc-hhhhhHHHhccccccc
Q psy10185        100 HFMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTC----QSP-ATSSLKYADYGVLGFV  174 (196)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~~~ik~r~~~~~----~~~-~~~~~i~~~~G~~gly  174 (196)
                      +|.+||.+|+.+.+..  .........+++|++||++++++++|+|+||+|+|.+.    .++ +|+++++++||++|||
T Consensus       181 ~f~~ye~~k~~l~~~~--~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~gly  258 (303)
T 2lck_A          181 ELVTYDLIKDTLLKAN--LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFY  258 (303)
T ss_dssp             HHHHHHHHHHTTTTTT--SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHH
T ss_pred             HHHHHHHHHHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhh
Confidence            9999999999887642  12233678899999999999999999999999999975    688 9999999999999999


Q ss_pred             cchhHHHHHHHhhhceeeeecC
Q psy10185        175 QGFVPRMLKRTLMSAISWTIFE  196 (196)
Q Consensus       175 ~G~~~~~~~~~~~~~~~~~~ye  196 (196)
                      ||+.++++|.+|+++++|.+||
T Consensus       259 rG~~~~~~r~~p~~~i~f~~ye  280 (303)
T 2lck_A          259 KGFMPSFLRLGSWNVVMFVTYE  280 (303)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHhHHHHHHHHHH
Confidence            9999999999999999999997



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 196
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-15
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-13
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-08
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 69.0 bits (167), Expect = 7e-15
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 24  PILHALLSGSISGTVSTILLQPLDVIKTRLQSNHSKAF-----HYDSLRQALVHIFRTEG 78
             L   L+G ++  +S   + P++ +K  LQ  H+         Y  +   +V I + +G
Sbjct: 5   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQG 64

Query: 79  LKGLWSGTVATLVRDAPYSGLHFMFYTQAKSFKPTGLNETTPGYVLF--QLACGGAAGAT 136
               W G +A ++R  P   L+F F  + K     G++     +  F   LA GGAAGAT
Sbjct: 65  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 124

Query: 137 ATLVTQPADIIKTRIQLTCQSP 158
           +     P D  +TR+       
Sbjct: 125 SLCFVYPLDFARTRLAADVGKG 146


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=3e-34  Score=224.12  Aligned_cols=168  Identities=23%  Similarity=0.356  Sum_probs=150.2

Q ss_pred             hHHHHHHHHHHHHHHHhhhcChHHHHHHHHHcCCC---CCCCCCcHHHHHHHHHHhhchhhhhcchhhhHHHHhcchhHH
Q psy10185         24 PILHALLSGSISGTVSTILLQPLDVIKTRLQSNHS---KAFHYDSLRQALVHIFRTEGLKGLWSGTVATLVRDAPYSGLH  100 (196)
Q Consensus        24 ~~~~~~~~g~~a~~~~~~v~~Pld~vk~~~q~~~~---~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~  100 (196)
                      .....+.+|..|++++.++.+|+|++|+|+|.+..   ..+.+.+..+.+++++++||+++||+|+.+++++++++.+++
T Consensus       110 ~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~  189 (292)
T d1okca_         110 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAY  189 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhh
Confidence            35567889999999999999999999999999762   234678999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCCchhHHHHHHHhHHHHhHhhhcchHHHHHHhHhhcc---------CCc-hhhhhHHHhccc
Q psy10185        101 FMFYTQAKSFKPTGLNETTPGYVLFQLACGGAAGATATLVTQPADIIKTRIQLTC---------QSP-ATSSLKYADYGV  170 (196)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~~~ik~r~~~~~---------~~~-~~~~~i~~~~G~  170 (196)
                      |.+||.+|+.+.+.    ........++++.+++.+++++++|+|+||+|+|.+.         .|+ +++++++++||+
T Consensus       190 ~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~  265 (292)
T d1okca_         190 FGVYDTAKGMLPDP----KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGP  265 (292)
T ss_dssp             HHHHHHHHHSSCGG----GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCG
T ss_pred             hhhccchhhhcccc----cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCc
Confidence            99999999876543    3334778899999999999999999999999999876         478 999999999999


Q ss_pred             cccccchhHHHHHHHhhhceeeeecC
Q psy10185        171 LGFVQGFVPRMLKRTLMSAISWTIFE  196 (196)
Q Consensus       171 ~gly~G~~~~~~~~~~~~~~~~~~ye  196 (196)
                      +|||||+.++++|.+| +++.|.+||
T Consensus       266 ~~lyrG~~~~~~r~i~-~~i~~~~ye  290 (292)
T d1okca_         266 KAFFKGAWSNVLRGMG-GAFVLVLYD  290 (292)
T ss_dssp             GGGGTTHHHHHHHHHH-HHHHHHHHH
T ss_pred             CcccccHHHHHHHHHH-HHhhhhHhh
Confidence            9999999999999877 578899887



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure