Psyllid ID: psy10258

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Secondary Structure (PSIPRED)
cccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MHTLKFYYWVVnprlktgvipkgldgprpaqKDILAIRAYILLFLKQLMmlgpgvkedELQSILNYLTT
Flexible Loop (DISEMBL)
MHTLKFYYWVVNprlktgvipkgldgprpAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Low Complexity Region (SEG)
MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Disordered region (IsUnstruct)
***LKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNY***
Disordered Region (DISOPRED)
MHTLKFYYWVVNPRLKTGVI********PAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Disordered Region (DISEMBL)
MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Disordered Region (DISPRO)
*HTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	69	2.2.26 [Sep-21-2011]
Q9W4E2	3578	Neurobeachin OS=Drosophil	yes	N/A	1.0	0.019	0.884	2e-32
Q8NFP9	2946	Neurobeachin OS=Homo sapi	yes	N/A	1.0	0.023	0.695	3e-25
Q9ESE1	2856	Lipopolysaccharide-respon	yes	N/A	1.0	0.024	0.681	3e-25
Q9EPN1	2936	Neurobeachin OS=Mus muscu	no	N/A	1.0	0.023	0.695	3e-25
P50851	2863	Lipopolysaccharide-respon	no	N/A	1.0	0.024	0.666	6e-25

>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3

 Score =  137 bits (345), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 613 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 672

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 673 QSILNYLTT 681

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.
Drosophila melanogaster (taxid: 7227)

>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3

 Score =  113 bits (283), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/69 (69%), Positives = 61/69 (88%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           MHTLK+YYWV+NP   +G+ PKGLDGPRP+QK+I+++RA++LLFLKQL++   GVKEDEL
Sbjct: 644 MHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDEL 703

Query: 61  QSILNYLTT 69
           QSILNYL T
Sbjct: 704 QSILNYLLT 712

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins.

Homo sapiens (taxid: 9606)

>sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus GN=Lrba PE=1 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           MHTLK+YYW VNP+ ++G+ PKGLDGPRP QK+IL++RA++L+F+KQL+M   GVKEDEL
Sbjct: 618 MHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLMFIKQLVMKDSGVKEDEL 677

Query: 61  QSILNYLTT 69
           Q+ILNYL T
Sbjct: 678 QAILNYLLT 686

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

Mus musculus (taxid: 10090)

>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/69 (69%), Positives = 61/69 (88%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           MHTLK+YYWV+NP   +G+ PKGLDGPRP+QK+I+++RA++LLFLKQL++   GVKEDEL
Sbjct: 634 MHTLKYYYWVINPADSSGIAPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDEL 693

Query: 61  QSILNYLTT 69
           QSILNYL T
Sbjct: 694 QSILNYLLT 702

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking.

Mus musculus (taxid: 10090)

>sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4

 Score =  112 bits (280), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/69 (66%), Positives = 61/69 (88%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           MHTLK+YYW VNP+ ++G+ PKGLDGPRP QK++L++RA++L+F+KQL+M   GVKEDEL
Sbjct: 618 MHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEMLSLRAFLLMFIKQLVMKDSGVKEDEL 677

Query: 61  QSILNYLTT 69
           Q+ILNYL T
Sbjct: 678 QAILNYLLT 686

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
198470829	3774	GA19855 [Drosophila pseudoobscura pseudo	1.0	0.018	0.884	7e-31
195425835	3583	GK10290 [Drosophila willistoni] gi|19415	1.0	0.019	0.884	7e-31
195396793	3654	GJ16846 [Drosophila virilis] gi|19414678	1.0	0.018	0.884	7e-31
195162083	2020	GL14282 [Drosophila persimilis] gi|19410	1.0	0.034	0.884	7e-31
195046432	3712	GH24603 [Drosophila grimshawi] gi|193892	1.0	0.018	0.884	7e-31
2393880	2359	A-kinase anchor protein DAKAP550 [Drosop	1.0	0.029	0.884	7e-31
24639818	3522	rugose, isoform B [Drosophila melanogast	1.0	0.019	0.884	7e-31
194888601	3580	GG18745 [Drosophila erecta] gi|190648591	1.0	0.019	0.884	8e-31
11863541	3554	AKAP550 [Drosophila melanogaster]	1.0	0.019	0.884	8e-31
221329705	3722	rugose, isoform D [Drosophila melanogast	1.0	0.018	0.884	9e-31

>gi|198470829|ref|XP_001355415.2| GA19855 [Drosophila pseudoobscura pseudoobscura] gi|198145639|gb|EAL32473.2| GA19855 [Drosophila pseudoobscura pseudoobscura]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 733 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 792

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 793 QSILNYLTT 801

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425835|ref|XP_002061170.1| GK10290 [Drosophila willistoni] gi|194157255|gb|EDW72156.1| GK10290 [Drosophila willistoni]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 659 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 718

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 719 QSILNYLTT 727

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195396793|ref|XP_002057013.1| GJ16846 [Drosophila virilis] gi|194146780|gb|EDW62499.1| GJ16846 [Drosophila virilis]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 671 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 730

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 731 QSILNYLTT 739

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195162083|ref|XP_002021885.1| GL14282 [Drosophila persimilis] gi|194103783|gb|EDW25826.1| GL14282 [Drosophila persimilis]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 203 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 262

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 263 QSILNYLTT 271

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195046432|ref|XP_001992152.1| GH24603 [Drosophila grimshawi] gi|193892993|gb|EDV91859.1| GH24603 [Drosophila grimshawi]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 681 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 740

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 741 QSILNYLTT 749

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|2393880|gb|AAB83959.1| A-kinase anchor protein DAKAP550 [Drosophila melanogaster]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 644 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 703

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 704 QSILNYLTT 712

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24639818|ref|NP_726978.1| rugose, isoform B [Drosophila melanogaster] gi|22831721|gb|AAN09135.1| rugose, isoform B [Drosophila melanogaster]

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 613 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 672

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 673 QSILNYLTT 681

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194888601|ref|XP_001976942.1| GG18745 [Drosophila erecta] gi|190648591|gb|EDV45869.1| GG18745 [Drosophila erecta]

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 673 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 732

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 733 QSILNYLTT 741

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|11863541|emb|CAC18799.1| AKAP550 [Drosophila melanogaster]

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 644 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 703

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 704 QSILNYLTT 712

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221329705|ref|NP_001138157.1| rugose, isoform D [Drosophila melanogaster] gi|220901675|gb|ACL82890.1| rugose, isoform D [Drosophila melanogaster]

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
           +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct: 813 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 872

Query: 61  QSILNYLTT 69
           QSILNYLTT
Sbjct: 873 QSILNYLTT 881

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
FB|FBgn0086911	3578	rg "rugose" [Drosophila melano	1.0	0.019	0.884	1.5e-27
UNIPROTKB|F1P3D0	2855	NBEA "Neurobeachin" [Gallus ga	1.0	0.024	0.710	1.1e-21
MGI|MGI:1347075	2936	Nbea "neurobeachin" [Mus muscu	1.0	0.023	0.695	1.4e-21
UNIPROTKB|Q8NFP9	2946	NBEA "Neurobeachin" [Homo sapi	1.0	0.023	0.695	1.4e-21
RGD|1311428	2709	Lrba "LPS-responsive vesicle t	1.0	0.025	0.681	2.1e-21
MGI|MGI:1933162	2856	Lrba "LPS-responsive beige-lik	1.0	0.024	0.681	2.2e-21
UNIPROTKB|P50851	2863	LRBA "Lipopolysaccharide-respo	1.0	0.024	0.666	4.6e-21
UNIPROTKB|E1BND6	2786	Bt.111067 "Uncharacterized pro	1.0	0.024	0.642	1.4e-19
UNIPROTKB|E1C6E6	2850	LRBA "Uncharacterized protein"	1.0	0.024	0.628	1.4e-19
UNIPROTKB|F1MF64	2809	NBEA "Uncharacterized protein"	0.652	0.016	0.711	7e-11

FB|FBgn0086911 rg "rugose" [Drosophila melanogaster (taxid:7227)]

 Score = 327 (120.2 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             +HTLK+YYWVVNPR K+G+IPKGLDGPRPAQKDILAIRAYILLFLKQL+M+G GVKEDEL
Sbjct:   613 VHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDEL 672

Query:    61 QSILNYLTT 69
             QSILNYLTT
Sbjct:   673 QSILNYLTT 681

GO:0016021 "integral to membrane" evidence=IDA

GO:0008104 "protein localization" evidence=NAS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0051018 "protein kinase A binding" evidence=NAS;IDA

GO:0042675 "compound eye cone cell differentiation" evidence=IMP

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

GO:0016319 "mushroom body development" evidence=IMP

UNIPROTKB|F1P3D0 NBEA "Neurobeachin" [Gallus gallus (taxid:9031)]

 Score = 271 (100.5 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 49/69 (71%), Positives = 61/69 (88%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             MHTLK+YYWVVNP   +G+ PKGLDGPRP+QK+I+++RA++LLFLKQL++   GVKEDEL
Sbjct:   546 MHTLKYYYWVVNPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDEL 605

Query:    61 QSILNYLTT 69
             QSILNYL T
Sbjct:   606 QSILNYLLT 614

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0012505 "endomembrane system" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

MGI|MGI:1347075 Nbea "neurobeachin" [Mus musculus (taxid:10090)]

 Score = 270 (100.1 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 48/69 (69%), Positives = 61/69 (88%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             MHTLK+YYWV+NP   +G+ PKGLDGPRP+QK+I+++RA++LLFLKQL++   GVKEDEL
Sbjct:   634 MHTLKYYYWVINPADSSGIAPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDEL 693

Query:    61 QSILNYLTT 69
             QSILNYL T
Sbjct:   694 QSILNYLLT 702

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006605 "protein targeting" evidence=ISS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=NAS

GO:0008104 "protein localization" evidence=IDA

GO:0012505 "endomembrane system" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=NAS

GO:0051018 "protein kinase A binding" evidence=NAS

UNIPROTKB|Q8NFP9 NBEA "Neurobeachin" [Homo sapiens (taxid:9606)]

 Score = 270 (100.1 bits), Expect = 1.4e-21, P = 1.4e-21
 Identities = 48/69 (69%), Positives = 61/69 (88%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             MHTLK+YYWV+NP   +G+ PKGLDGPRP+QK+I+++RA++LLFLKQL++   GVKEDEL
Sbjct:   644 MHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDEL 703

Query:    61 QSILNYLTT 69
             QSILNYL T
Sbjct:   704 QSILNYLLT 712

GO:0008104 "protein localization" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0012505 "endomembrane system" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005802 "trans-Golgi network" evidence=ISS

RGD|1311428 Lrba "LPS-responsive vesicle trafficking, beach and anchor containing" [Rattus norvegicus (taxid:10116)]

 Score = 268 (99.4 bits), Expect = 2.1e-21, P = 2.1e-21
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             MHTLK+YYW VNP+ ++G+ PKGLDGPRP QK+IL++RA++L+F+KQL+M   GVKEDEL
Sbjct:   470 MHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLMFIKQLVMKDSGVKEDEL 529

Query:    61 QSILNYLTT 69
             Q+ILNYL T
Sbjct:   530 QAILNYLLT 538

GO:0005764 "lysosome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005802 "trans-Golgi network" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=ISO

MGI|MGI:1933162 Lrba "LPS-responsive beige-like anchor" [Mus musculus (taxid:10090)]

 Score = 268 (99.4 bits), Expect = 2.2e-21, P = 2.2e-21
 Identities = 47/69 (68%), Positives = 61/69 (88%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             MHTLK+YYW VNP+ ++G+ PKGLDGPRP QK+IL++RA++L+F+KQL+M   GVKEDEL
Sbjct:   618 MHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLMFIKQLVMKDSGVKEDEL 677

Query:    61 QSILNYLTT 69
             Q+ILNYL T
Sbjct:   678 QAILNYLLT 686

GO:0005764 "lysosome" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007165 "signal transduction" evidence=TAS

GO:0008104 "protein localization" evidence=ISA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0016197 "endosomal transport" evidence=TAS

GO:0051018 "protein kinase A binding" evidence=ISA

UNIPROTKB|P50851 LRBA "Lipopolysaccharide-responsive and beige-like anchor protein" [Homo sapiens (taxid:9606)]

 Score = 265 (98.3 bits), Expect = 4.6e-21, P = 4.6e-21
 Identities = 46/69 (66%), Positives = 61/69 (88%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGLDGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDEL 60
             MHTLK+YYW VNP+ ++G+ PKGLDGPRP QK++L++RA++L+F+KQL+M   GVKEDEL
Sbjct:   618 MHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEMLSLRAFLLMFIKQLVMKDSGVKEDEL 677

Query:    61 QSILNYLTT 69
             Q+ILNYL T
Sbjct:   678 QAILNYLLT 686

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E1BND6 Bt.111067 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 45/70 (64%), Positives = 60/70 (85%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGL-DGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDE 59
             MHTLK+YYW VNP+ ++G+ PKGL DGPRP QK++ ++RA++L+F+KQL+M   GVKEDE
Sbjct:   546 MHTLKYYYWAVNPQDRSGITPKGLEDGPRPNQKEMFSLRAFLLMFIKQLVMKDNGVKEDE 605

Query:    60 LQSILNYLTT 69
             LQ+ILNYL T
Sbjct:   606 LQAILNYLLT 615

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

UNIPROTKB|E1C6E6 LRBA "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 251 (93.4 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 44/70 (62%), Positives = 61/70 (87%)

Query:     1 MHTLKFYYWVVNPRLKTGVIPKGL-DGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDE 59
             MHTLK+YYWVVNP+ ++G+ PKG+ DGPRP QK+ L++RA++L+F+KQL+M   G+KE+E
Sbjct:   619 MHTLKYYYWVVNPQDRSGITPKGIVDGPRPTQKETLSLRAFLLMFIKQLVMKDYGIKEEE 678

Query:    60 LQSILNYLTT 69
             LQ+ILNYL T
Sbjct:   679 LQAILNYLLT 688

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

UNIPROTKB|F1MF64 NBEA "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 169 (64.5 bits), Expect = 7.0e-11, P = 7.0e-11
 Identities = 32/45 (71%), Positives = 41/45 (91%)

Query:    25 DGPRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILNYLTT 69
             DGPRP+QK+I+++RA++LLFLKQL++   GVKEDELQSILNYL T
Sbjct:   532 DGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLT 576


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.144   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        69   0.00091  102 3  11 22  0.44    28
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  466 (50 KB)
  Total size of DFA:  86 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:04
  No. of threads or processors used:  24
  Search cpu time:  8.10u 0.07s 8.17t   Elapsed:  00:00:09
  Total cpu time:  8.10u 0.07s 8.17t   Elapsed:  00:00:16
  Start:  Thu Aug 15 13:47:31 2013   End:  Thu Aug 15 13:47:47 2013

GO:0019901 "protein kinase binding" evidence=IEA

GO:0012505 "endomembrane system" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8NFP9	NBEA_HUMAN	No assigned EC number	0.6956	1.0	0.0234	yes	N/A
Q9W4E2	NBEA_DROME	No assigned EC number	0.8840	1.0	0.0192	yes	N/A
Q9ESE1	LRBA_MOUSE	No assigned EC number	0.6811	1.0	0.0241	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
PF00034	91	Cytochrom_C: Cytochrome c; InterPro: IPR003088 Cyt	83.81
cd04764	67	HTH_MlrA-like_sg1 Helix-Turn-Helix DNA binding dom	81.82

>PF00034 Cytochrom_C: Cytochrome c; InterPro: IPR003088 Cytochromes c (cytC) can be defined as electron-transfer proteins having one or several haem c groups, bound to the protein by one or, more generally, two thioether bonds involving sulphydryl groups of cysteine residues

Probab=83.81  E-value=0.76  Score=25.45  Aligned_cols=16  Identities=19%  Similarity=0.499  Sum_probs=14.3

Q ss_pred             CCChHHHHHHHHhhhC
Q psy10258         54 GVKEDELQSILNYLTT   69 (69)
Q Consensus        54 g~~ddEl~aiLNyL~T   69 (69)
                      .++|+|+++|.+||.|
T Consensus        74 ~ls~~e~~~l~ayl~s   89 (91)
T PF00034_consen   74 ILSDEEIADLAAYLRS   89 (91)
T ss_dssp             TSSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH
Confidence            5899999999999964

The fifth haem iron ligand is always provided by a histidine residue. CytC possess a wide range of properties and function in a large number of different redox processes. Ambler [] recognised four classes of cytC. Class I includes the low-spin soluble cytC of mitochondria and bacteria, with the haem-attachment site towards the N terminus, and the sixth ligand provided by a methionine residue about 40 residues further on towards the C terminus. On the basis of sequence similarity, class I cytC were further subdivided into five classes, IA to IE. Class IB includes the eukaryotic mitochondrial cytC and prokaryotic 'short' cyt c2 exemplified by Rhodopila globiformis cyt c2; class IA includes 'long' cyt c2, such as Rhodospirillum rubrum cyt c2 and Aquaspirillum itersonii cyt c-550, which have several extra loops by comparison with class IB cytC.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0020037 heme binding; PDB: 1YNR_B 2AI5_A 1AYG_A 3O5C_C 1YEA_A 3CXH_W 1YTC_A 1YEB_A 2YBB_Y 2B4Z_A ....

>cd04764 HTH_MlrA-like_sg1 Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators

Probab=81.82  E-value=3  Score=23.75  Aligned_cols=32  Identities=28%  Similarity=0.420  Sum_probs=23.5

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHhhCCCCCChHHHHHHHH
Q psy10258         27 PRPAQKDILAIRAYILLFLKQLMMLGPGVKEDELQSILN   65 (69)
Q Consensus        27 ~rp~~~ei~siRa~iL~flkqLi~~~~g~~ddEl~aiLN   65 (69)
                      -+-+.+||..++     .+++|..  .|.+=+|++.+||
T Consensus        36 R~y~~~~l~~l~-----~i~~l~~--~g~~l~~i~~~l~   67 (67)
T cd04764          36 RYYTDEDIELLK-----KIKTLLE--KGLSIKEIKEILN   67 (67)
T ss_pred             eeeCHHHHHHHH-----HHHHHHH--CCCCHHHHHHHhC
Confidence            457888888665     4555653  7788889998886

Putative helix-turn-helix (HTH) MlrA-like transcription regulators (subgroup 1). The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules. Many MlrA-like proteins in this group appear to lack the long dimerization helix seen in the N-terminal domains of typical MerR-like proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	69
1c75_A	71	Cytochrome C-553; heme, bacillus pasteurii, AB ini	86.55
1f1f_A	89	Cytochrome C6; heme, protein structure, cyanobacte	86.39

>1c75_A Cytochrome C-553; heme, bacillus pasteurii, AB initio, ATOM resolution, electron transport; HET: HEM; 0.97A {Sporosarcina pasteurii} SCOP: a.3.1.1 PDB: 1b7v_A* 1k3g_A* 1k3h_A* 1n9c_A*

Probab=86.55  E-value=1  Score=24.40  Aligned_cols=20  Identities=25%  Similarity=0.336  Sum_probs=15.9

Q ss_pred             hCCCCCChHHHHHHHHhhhC
Q psy10258         50 MLGPGVKEDELQSILNYLTT   69 (69)
Q Consensus        50 ~~~~g~~ddEl~aiLNyL~T   69 (69)
                      |.....+|+|+.+|..||.+
T Consensus        50 Mp~~~ls~~ei~~l~~yl~~   69 (71)
T 1c75_A           50 MPGGIAKGAEAEAVAAWLAE   69 (71)
T ss_dssp             BCSCSSCHHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHHHh
Confidence            44455789999999999974

>1f1f_A Cytochrome C6; heme, protein structure, cyanobacteria, photosynthesis, electron transport; HET: HEM; 2.70A {Arthrospira maxima} SCOP: a.3.1.1 PDB: 1kib_A*

Probab=86.39  E-value=2  Score=23.52  Aligned_cols=44  Identities=11%  Similarity=0.148  Sum_probs=25.9

Q ss_pred             CCCCchHHHHHH--------HHHHHHHHHHH--hhCCC--CCChHHHHHHHHhhhC
Q psy10258         26 GPRPAQKDILAI--------RAYILLFLKQL--MMLGP--GVKEDELQSILNYLTT   69 (69)
Q Consensus        26 g~rp~~~ei~si--------Ra~iL~flkqL--i~~~~--g~~ddEl~aiLNyL~T   69 (69)
                      +|..+...+..-        ++.+..+++.=  .|...  ..+|+|+.+|.+||.+
T Consensus        28 ~P~L~~~~~~~~l~~~~~~~~~~l~~~i~~g~~~Mp~~~~~ls~~ei~~l~~yl~~   83 (89)
T 1f1f_A           28 NKTLSKSDLAKYLKGFDDDAVAAVAYQVTNGKNAMPGFNGRLSPLQIEDVAAYVVD   83 (89)
T ss_dssp             TCCSSHHHHHHHSTTTTTCHHHHHHHHHHHCBTTBCCCTTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHhhccCccCHHHHHHHHHcCCCCCCccccCCCHHHHHHHHHHHHH
Confidence            455555544432        44444444431  24433  3789999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	69
d351ca_	82	Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 28	89.12
d1cora_	82	Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]	88.9
d1ynra1	80	Cytochrome c552 {Hydrogenobacter thermophilus [Tax	86.23
d1cc5a_	83	Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]	81.67
d1mz4a_	131	Cytochrome c550 {Thermosynechococcus elongatus [Ta	80.87

>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}

class: All alpha proteins
fold: Cytochrome c
superfamily: Cytochrome c
family: monodomain cytochrome c
domain: Cytochrome c551
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.12  E-value=0.13  Score=28.09  Aligned_cols=20  Identities=25%  Similarity=0.434  Sum_probs=16.6

Q ss_pred             hCCCCCChHHHHHHHHhhhC
Q psy10258         50 MLGPGVKEDELQSILNYLTT   69 (69)
Q Consensus        50 ~~~~g~~ddEl~aiLNyL~T   69 (69)
                      |....++|+|+.+|.+||.|
T Consensus        61 MP~~~lsd~ei~~la~Yi~S   80 (82)
T d351ca_          61 MPPNAVSDDEAQTLAKWVLS   80 (82)
T ss_dssp             BCCCSCCHHHHHHHHHHHHT
T ss_pred             ccccCCCHHHHHHHHHHHHh
Confidence            44456899999999999975

>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}

class: All alpha proteins
fold: Cytochrome c
superfamily: Cytochrome c
family: monodomain cytochrome c
domain: Cytochrome c551
species: Pseudomonas stutzeri [TaxId: 316]

Probab=88.90  E-value=0.12  Score=28.08  Aligned_cols=20  Identities=20%  Similarity=0.325  Sum_probs=16.4

Q ss_pred             hCCCCCChHHHHHHHHhhhC
Q psy10258         50 MLGPGVKEDELQSILNYLTT   69 (69)
Q Consensus        50 ~~~~g~~ddEl~aiLNyL~T   69 (69)
                      |....++|+|+.+|.+||.+
T Consensus        61 Mp~~~lsdeei~~la~Yi~S   80 (82)
T d1cora_          61 MPPNPVTEEEAKILAEWILS   80 (82)
T ss_dssp             BCCCSCCHHHHHHHHHHHHS
T ss_pred             ccccCCCHHHHHHHHHHHHh
Confidence            44456899999999999975

>d1ynra1 a.3.1.1 (A:1-80) Cytochrome c552 {Hydrogenobacter thermophilus [TaxId: 940]}

class: All alpha proteins
fold: Cytochrome c
superfamily: Cytochrome c
family: monodomain cytochrome c
domain: Cytochrome c552
species: Hydrogenobacter thermophilus [TaxId: 940]

Probab=86.23  E-value=0.24  Score=26.94  Aligned_cols=17  Identities=12%  Similarity=0.386  Sum_probs=15.0

Q ss_pred             CCCChHHHHHHHHhhhC
Q psy10258         53 PGVKEDELQSILNYLTT   69 (69)
Q Consensus        53 ~g~~ddEl~aiLNyL~T   69 (69)
                      ..++|||+.+|..||.|
T Consensus        62 ~~lsd~ei~~l~~yi~s   78 (80)
T d1ynra1          62 QNVTDAEAKQLAQWILS   78 (80)
T ss_dssp             CSCCHHHHHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHHHH
Confidence            55799999999999975

>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Cytochrome c
superfamily: Cytochrome c
family: monodomain cytochrome c
domain: Cytochrome c5
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.67  E-value=0.48  Score=25.76  Aligned_cols=15  Identities=20%  Similarity=0.472  Sum_probs=13.4

Q ss_pred             CChHHHHHHHHhhhC
Q psy10258         55 VKEDELQSILNYLTT   69 (69)
Q Consensus        55 ~~ddEl~aiLNyL~T   69 (69)
                      .+|+|+.+|++||.+
T Consensus        68 Lsd~ei~~vv~Yi~~   82 (83)
T d1cc5a_          68 CSDDELKAAIGKMSG   82 (83)
T ss_dssp             CCHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHhh
Confidence            579999999999964

>d1mz4a_ a.3.1.1 (A:) Cytochrome c550 {Thermosynechococcus elongatus [TaxId: 146786]}

class: All alpha proteins
fold: Cytochrome c
superfamily: Cytochrome c
family: monodomain cytochrome c
domain: Cytochrome c550
species: Thermosynechococcus elongatus [TaxId: 146786]

Probab=80.87  E-value=0.44  Score=27.30  Aligned_cols=15  Identities=20%  Similarity=0.339  Sum_probs=13.5

Q ss_pred             CCChHHHHHHHHhhh
Q psy10258         54 GVKEDELQSILNYLT   68 (69)
Q Consensus        54 g~~ddEl~aiLNyL~   68 (69)
                      +.+|||+.+|.+||.
T Consensus       106 ~Lsdeei~av~aYi~  120 (131)
T d1mz4a_         106 NLTEKDLVAIAGHIL  120 (131)
T ss_dssp             TCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH
Confidence            479999999999985