Psyllid ID: psy10276

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
MFSVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRGVDLPMPGHL
Secondary Structure (PSIPRED)
ccEEEEEHHHHHEEEEEEEEEcEEEEccHHHHHHHHHcccccEEEEEEEcccccHHHHEEEEEEEEcccEEEEEcccHHHcccccccEEEEEEEcccccccEEEEEEEEEEEEEccHHHHHHHHcccccccHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHEEEEHHHHHHHHcEEEEEEEEEEccHHHHHHHcccccEEEEEEEEccccHHHHHHHHEEEEEHHHHHHHccHHHHHHHcccccEEEEEEEccccccHHEEEEEEEEEEEEcccHHHHHHHHccccHHEEEEHHHcccccccHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
MFSVFLVYASVLFFFKnvrvegeleiltrdrfedlynreplyckirahlchpssrlFRFLFLHVRVegeleiltrdrfedlynreplyckirahlchpfwmaSKRVRVEGELEILTQDRfedlynreplyckirahlchqdqatdwdeaKATHDAIYDkckrgvdlpmpghl
Flexible Loop (DISEMBL)
MFSVFLVYASVLfffknvrvegeleiltrdrfedlYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGeleiltrdrfedlYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKckrgvdlpmpghl
Low Complexity Region (SEG)
MFSVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRGVDLPMPGHL
Disordered region (IsUnstruct)
**SVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKR**********
Disordered Region (DISOPRED)
*FSVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKR****P*****
Disordered Region (DISEMBL)
MFSVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRGVDLPMPGHL
Disordered Region (DISPRO)
MFSVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRG*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSVFLVYASVLFFFKNVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRGVDLPMPGHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
328776584	128	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.401	0.539	0.5	8e-14
340723606	254	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.401	0.271	0.528	1e-13
350426260	254	PREDICTED: pyridoxine-5'-phosphate oxida	0.406	0.275	0.507	2e-13
380022627	223	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.389	0.300	0.5	1e-12
350427950	110	PREDICTED: pyridoxine-5'-phosphate oxida	0.389	0.609	0.514	2e-12
345498102	218	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.482	0.380	0.404	3e-12
383857545	128	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.406	0.546	0.507	9e-12
328722061	186	PREDICTED: pyridoxine/pyridoxamine 5'-ph	0.406	0.376	0.422	6e-11
322793755	101	hypothetical protein SINV_06341 [Solenop	0.290	0.495	0.54	6e-09
332016930	185	Pyridoxine/pyridoxamine 5'-phosphate oxi	0.377	0.351	0.417	9e-07

>gi|328776584|ref|XP_623931.2| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase-like [Apis mellifera]

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 104 KRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRG 163
           K++R+EG ++ L ++ F+ LY+REPL+CKIR+H+C Q    DWDE K  HD I+D  ++G
Sbjct: 17  KQIRIEGIMKKLEKENFKHLYDREPLFCKIRSHICKQGHNVDWDELKQRHDKIFDSVRKG 76

Query: 164 -VDLPMPGHL 172
             DLPMP H 
Sbjct: 77  ENDLPMPDHF 86

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723606|ref|XP_003400180.1| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase-like [Bombus terrestris]

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 1/70 (1%)

Query: 104 KRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRG 163
           K+VRVEG ++ L ++ F+ LY+REPL+CKIR+H+C+Q +  DW+E K  HD I D  +RG
Sbjct: 143 KQVRVEGTMKRLERESFKHLYDREPLFCKIRSHVCNQGRDVDWEELKQRHDEILDSVRRG 202

Query: 164 -VDLPMPGHL 172
             DLPMP H 
Sbjct: 203 ENDLPMPDHF 212

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350426260|ref|XP_003494383.1| PREDICTED: pyridoxine-5'-phosphate oxidase-like [Bombus impatiens]

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)

Query: 103 SKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKR 162
           +K+VRVEG ++ L ++ F+ LY+REPL+CKIR+H+C+Q +  +W+E K  HD I D  +R
Sbjct: 142 TKQVRVEGAMKRLEKESFKHLYDREPLFCKIRSHICNQGRDVNWEELKQRHDEILDSVRR 201

Query: 163 G-VDLPMPGHL 172
           G  DLPMP H 
Sbjct: 202 GENDLPMPDHF 212

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022627|ref|XP_003695141.1| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase-like [Apis florea]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 106 VRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRG-V 164
           +R+EG ++ L ++ F+ LY+REPL+CKIR+H+C Q    DWDE K  HD I+D   +G  
Sbjct: 114 IRIEGIMKRLDKENFKHLYDREPLFCKIRSHICKQGHNIDWDELKKRHDEIFDSVHKGEN 173

Query: 165 DLPMPGHL 172
           DLPMP H 
Sbjct: 174 DLPMPDHF 181

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427950|ref|XP_003494937.1| PREDICTED: pyridoxine-5'-phosphate oxidase-like, partial [Bombus impatiens]

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 106 VRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRG-V 164
           VRVEG ++ L ++ F+ LY+REPL+CKIR+H+C+Q +  +W+E K  HD I D  +RG  
Sbjct: 1   VRVEGAMKRLEKESFKHLYDREPLFCKIRSHICNQGRDVNWEELKQRHDEILDSVRRGEN 60

Query: 165 DLPMPGHL 172
           DLPMP H 
Sbjct: 61  DLPMPDHF 68

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345498102|ref|XP_003428149.1| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase-like [Nasonia vitripennis]

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 89  CKIRAHLCHPFWMASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDE 148
           C + A+L       +++VR+EG++ +L +D + DLY ++ L+CKIRA++CHQDQ  DW++
Sbjct: 92  CFLWAYLNDKGQRVARQVRIEGDVVVLGKDSYADLYEKDKLFCKIRAYICHQDQEVDWND 151

Query: 149 AKATHDAIYDKCK-RGVDLPMPGH 171
            KA HD + +  +     LPMP H
Sbjct: 152 LKARHDQLLNDVRLNKKSLPMPDH 175

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857545|ref|XP_003704265.1| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase-like [Megachile rotundata]

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 103 SKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKR 162
           +++VRVEG +  L ++ F+ LY REPLYCK+RAHLCHQ +   W+E K  HD I D  +R
Sbjct: 16  TRQVRVEGTMIRLKKEEFQHLYEREPLYCKVRAHLCHQGREVYWEELKQRHDEILDSVRR 75

Query: 163 G-VDLPMPGHL 172
              DL MP H 
Sbjct: 76  NDNDLRMPDHF 86

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722061|ref|XP_001947706.2| PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase-like [Acyrthosiphon pisum]

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)

Query: 103 SKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKR 162
           +++VR+EG +  LT D  ++LY+ EPL+CKIRA +C Q +  +W++ K  HD ++DK  +
Sbjct: 76  TRQVRIEGTVNKLTTDNMKELYDIEPLFCKIRAQICEQGKVVEWEQLKRDHDQLFDKVSK 135

Query: 163 -GVDLPMPGHL 172
             V LP P H+
Sbjct: 136 YNVQLPKPDHV 146

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322793755|gb|EFZ17139.1| hypothetical protein SINV_06341 [Solenopsis invicta]

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 123 LYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRGVDLPMPGHL 172
           +Y+REPLYCKIRAHLCHQDQ  +WD+    ++ I  +   G DLPMP ++
Sbjct: 12  IYDREPLYCKIRAHLCHQDQPANWDDLNRRYNEILAQANMGEDLPMPDYV 61

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016930|gb|EGI57739.1| Pyridoxine/pyridoxamine 5'-phosphate oxidase [Acromyrmex echinatior]

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 106 VRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDKCKRGVD 165
           VR+EG ++ L +   + +Y REPL+CKIR HLCHQDQ  DWD     ++ I    ++ + 
Sbjct: 81  VRIEGLMKKLDRPACQLIYEREPLHCKIRTHLCHQDQPADWDNLNRRYNEIL--VQKDIV 138

Query: 166 LPMPGHL 172
             MP H+
Sbjct: 139 HTMPDHV 145

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
COG0259	214	PdxH Pyridoxamine-phosphate oxidase [Coenzyme meta	100.0
KOG2586|consensus	228		100.0
PLN02918	544	pyridoxine (pyridoxamine) 5'-phosphate oxidase	100.0
PLN03049	462	pyridoxine (pyridoxamine) 5'-phosphate oxidase; Pr	100.0
PRK05679	195	pyridoxamine 5'-phosphate oxidase; Provisional	99.95
TIGR00558	217	pdxH pyridoxamine-phosphate oxidase. This model is	99.95
KOG2586|consensus	228		99.59
COG0259	214	PdxH Pyridoxamine-phosphate oxidase [Coenzyme meta	99.58
PLN02918	544	pyridoxine (pyridoxamine) 5'-phosphate oxidase	99.17
PF01243	89	Pyridox_oxidase: Pyridoxamine 5'-phosphate oxidase	98.96
PLN03049	462	pyridoxine (pyridoxamine) 5'-phosphate oxidase; Pr	98.89
PF12766	100	Pyridox_oxase_2: Pyridoxamine 5'-phosphate oxidase	98.59
TIGR03618	117	Rv1155_F420 PPOX class probable F420-dependent enz	98.47
TIGR03667	130	Rv3369 PPOX class probable F420-dependent enzyme,	98.24
PRK05679	195	pyridoxamine 5'-phosphate oxidase; Provisional	98.16
TIGR00558	217	pdxH pyridoxamine-phosphate oxidase. This model is	97.86
COG3871	145	Uncharacterized stress protein (general stress pro	97.51
TIGR03666	132	Rv2061_F420 PPOX class probable F420-dependent enz	96.59
PRK03467	144	hypothetical protein; Provisional	95.69
COG5135	245	Uncharacterized conserved protein [Function unknow	95.15
TIGR03668	141	Rv0121_F420 PPOX class probable F420-dependent enz	94.57
PRK06733	151	hypothetical protein; Provisional	90.35
COG5015	132	Uncharacterized conserved protein [Function unknow	85.97

>COG0259 PdxH Pyridoxamine-phosphate oxidase [Coenzyme metabolism]

Probab=100.00  E-value=1.8e-50  Score=338.14  Aligned_cols=128  Identities=22%  Similarity=0.260  Sum_probs=116.9

Q ss_pred             cccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCCCceEEEEEeeEEc
Q psy10276         38 REPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEIL  115 (172)
Q Consensus        38 ~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG~vekl  115 (172)
                      ++|..--+.+.  +|+|++|   |||||++|++||+|||||+|+||+||++||   +|||||+|-.|+|||||+|.||+|
T Consensus        44 ~ePnAm~lATvd~~G~P~~R---~VLLK~~DerGfvFyTN~~S~Kg~eLa~np---~Aal~F~W~~L~RQVrv~G~ve~v  117 (214)
T COG0259          44 NEPNAMTLATVDEQGRPSSR---IVLLKELDERGFVFYTNYGSRKGRELAANP---YAALLFPWKELERQVRVEGRVERV  117 (214)
T ss_pred             CCCceeEEEeecCCCCceee---EEEecccCCCcEEEEeccCCcchhhHhhCc---ceeEEecchhccceEEEeeeeeeC
Confidence            46666555544  5778887   799999999999999999999999999999   999994444599999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++|||+||+|||++||||||||+||.+| ||.+|+++++++.++|+++ +||+|+||
T Consensus       118 s~eesd~Yf~sRPr~S~iGAWAS~QS~~i~~r~~Le~~~ae~~~kf~~~-~iP~P~~W  174 (214)
T COG0259         118 SDEESDAYFASRPRGSQIGAWASKQSRPIASRAALEAKVAELTAKFADG-EIPRPPHW  174 (214)
T ss_pred             CHHHHHHHHhcCCCcCccchhhccCccccCCHHHHHHHHHHHHHhcCCC-CCCCCCCc
Confidence            99999999999999999999999999999 9999999999999999976 59999998

>KOG2586|consensus

Probab=100.00  E-value=1.7e-43  Score=296.77  Aligned_cols=119  Identities=20%  Similarity=0.249  Sum_probs=113.4

Q ss_pred             cccCCCCceeeEEEEeeeecCCceEEEecC-CCchhhccccccccccceeeccCCC-CCceEEEEEeeEEcCHHHHHHHH
Q psy10276         47 AHLCHPSSRLFRFLFLHVRVEGELEILTRD-RFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEILTQDRFEDLY  124 (172)
Q Consensus        47 a~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~-~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl~~eesd~YF  124 (172)
                      ..++.||+|   |||||++|.+||+||||| .|+||+||++||   +|||+ |||+ |.|||||||.||+|+++|+++||
T Consensus        65 ~~d~rvssR---mvLlKgl~~~gf~fytn~~~srk~kdL~~NP---~Aal~-Fyw~~l~rQVRveG~ve~l~~ee~e~yf  137 (228)
T KOG2586|consen   65 DKDGRVSSR---MVLLKGLDHDGFVFYTNYGTSRKGKDLQENP---NAALL-FYWEDLNRQVRVEGIVEKLPREEAEAYF  137 (228)
T ss_pred             cccCCccee---eeeeecccCCCeEEEeeccccccccccccCC---cceEE-EeehhccceeEEEeccccCCHHHHHHHH
Confidence            347788887   799999999999999999 999999999999   99999 7776 99999999999999999999999


Q ss_pred             hhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        125 NREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       125 ~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++||++||||||+|+||.+| +|++|+++.+++.++|.+++.||+|++|
T Consensus       138 ~srp~~SqIga~~s~qs~vI~~re~l~k~~e~l~~~~~~~~~IpkP~sw  186 (228)
T KOG2586|consen  138 KSRPRASQIGAWASPQSEVIPDREELEKKDEELTELFGDEQSIPKPDSW  186 (228)
T ss_pred             hcCcchhhccceecCCCCccCCHHHHHHHHHHHHHHhcccccccCCCcc
Confidence            99999999999999999999 9999999999999999987789999987

>PLN02918 pyridoxine (pyridoxamine) 5'-phosphate oxidase

Probab=100.00  E-value=1.3e-39  Score=302.44  Aligned_cols=136  Identities=21%  Similarity=0.290  Sum_probs=122.0

Q ss_pred             hhHhhhhh-------cccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCC
Q psy10276         30 DRFEDLYN-------REPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFW  100 (172)
Q Consensus        30 ~~~~~~~~-------~~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w  100 (172)
                      +.+.+.|+       .+|..--+++  .+|.|++|   |||||++|++||+||||+.|+|++||++||   +|||+ |||
T Consensus       354 ~~F~~W~~eA~~~~~~eP~Am~LATv~~~G~P~~R---tVlLk~~d~~g~~F~Tn~~S~K~~el~~Np---~aal~-F~w  426 (544)
T PLN02918        354 DQFRKWFDEAVAAGLREPNAMALSTANKDGKPSSR---MVLLKGVDKNGFVWYTNYESQKGSDLSENP---SAALL-FYW  426 (544)
T ss_pred             HHHHHHHHHHHhcCCCCCccceEEeeCCCCCeeeE---EEEEeEEcCCceEEEECCCChhHHHHHhCC---cEEEE-eee
Confidence            34556665       3666666666  46888887   799999999999999999999999999999   99999 667


Q ss_pred             C-CCceEEEEEeeEEcCHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        101 M-ASKRVRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       101 ~-l~RQVRIeG~vekl~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      + +.|||||+|.|++++++|||+||++||++||||||||+||++| ||++|++++++++++|.++.+||+|+||
T Consensus       427 ~~l~rQVRi~G~v~~~~~~es~~yf~sRp~~Sqi~A~aS~QS~~i~~r~~L~~~~~~~~~~~~~~~~vp~P~~W  500 (544)
T PLN02918        427 EELNRQVRVEGSVQKVPESESENYFHSRPRGSQIGAIVSKQSSVVPGRHVLYQEYKELEKKYSDGSVIPKPKNW  500 (544)
T ss_pred             ccccEEEEEEEEEEECCHHHHHHHHHhCCccccceEEecCCCCcCCCHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            6 9999999999999999999999999999999999999999998 9999999999999999754339999998

>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional

Probab=100.00  E-value=1.4e-37  Score=283.31  Aligned_cols=128  Identities=20%  Similarity=0.267  Sum_probs=118.8

Q ss_pred             cccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEE
Q psy10276         38 REPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEI  114 (172)
Q Consensus        38 ~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vek  114 (172)
                      .+|+..-+++.  +|.|++|   +||||++|++||+|||||+|+|++||++||   +|||| |||+ +.|||||+|.|++
T Consensus       287 ~ep~am~LATvd~~G~P~~R---~VlLk~~d~~g~~F~Tn~~S~K~~eL~~Np---~aal~-F~w~~~~rQvRv~G~a~~  359 (462)
T PLN03049        287 REPNAMTLATAGEDGRPSAR---IVLLKGVDKRGFVWYTNYDSRKAHELSANP---KASLV-FYWDGLHRQVRVEGSVEK  359 (462)
T ss_pred             CCCCeeEEEEECCCCCeeEE---EEEEeEEcCCcEEEEECCCCHHHHHHhhCC---cEEEE-eecCCCCEEEEEEEEEEE
Confidence            47887777774  5888887   799999999999999999999999999999   99999 6676 9999999999999


Q ss_pred             cCHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        115 LTQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       115 l~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++||+||++||++||||||||+||+++ +|++|++++++++++|.++.++|+|+||
T Consensus       360 ~~~~~s~~yf~~rp~~sq~~a~as~qs~~i~~~~~l~~~~~~~~~~~~~~~~~p~p~~w  418 (462)
T PLN03049        360 VSEEESDQYFHSRPRGSQIGALVSKQSTVIPGRHILDQSYKELEAKYADSSAIPKPKHW  418 (462)
T ss_pred             CCHHHHHHHHHhCChhhhhhheeCCCCCcCCCHHHHHHHHHHHHHhhccCCCCCCCCce
Confidence            999999999999999999999999999998 9999999999999999754579999998

>PRK05679 pyridoxamine 5'-phosphate oxidase; Provisional

Probab=99.95  E-value=3.7e-28  Score=198.54  Aligned_cols=127  Identities=20%  Similarity=0.241  Sum_probs=114.7

Q ss_pred             cccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEE
Q psy10276         38 REPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEI  114 (172)
Q Consensus        38 ~~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vek  114 (172)
                      ..|+..-+++  .+|.|++|   +|+|++++++||.||||..|+|+++|+.||   +|||| |||+ +.|||||+|.|++
T Consensus        25 ~~~~~~~lATv~~dG~P~~R---~V~lr~~~~~~l~f~T~~~S~K~~~l~~np---~val~-~~~~~~~~qvrv~G~a~~   97 (195)
T PRK05679         25 NDPNAMTLATVDEDGRPSQR---IVLLKGFDERGFVFYTNYESRKGRQLAANP---KAALL-FPWKSLERQVRVEGRVEK   97 (195)
T ss_pred             CCCceEEEEeeCCCCCEEEE---EEEEEEECCCeEEEEeCCCCHHHHHHhhCC---cEEEE-EecCCCCEEEEEEEEEEE
Confidence            3556555655  36778887   799999999999999999999999999999   99999 6665 9999999999999


Q ss_pred             cCHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        115 LTQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       115 l~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++++++||.++|+++|+++|+|+||+++ ++++|+++++++.+++.+ .++|+|++|
T Consensus        98 ~~~~~~~~~w~~~p~~~r~~~~~~~qg~~i~~~~~~~~~~~~~~~~~~~-~~~~~p~~f  155 (195)
T PRK05679         98 VSAEESDAYFASRPRGSQIGAWASKQSRPISSRAALEAKFAEVKAKFAQ-GEVPRPPHW  155 (195)
T ss_pred             eCHHHHHHHHHhCCHhhhceeeeCCCCCccCCHHHHHHHHHHHHhhccC-CCCCCCCcc
Confidence            999999999999999999999999999998 899999999999999964 468999987

>TIGR00558 pdxH pyridoxamine-phosphate oxidase

Probab=99.95  E-value=3.4e-28  Score=202.77  Aligned_cols=126  Identities=23%  Similarity=0.290  Sum_probs=112.8

Q ss_pred             ccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         39 EPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        39 ~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      +|+-.-+++-  +|.|++|   ||+||+++++||.||||..|+|+.+|++||   +|+|| |||+ +.+||||+|+|+.+
T Consensus        48 ~~~~~~LaTvd~~G~P~~R---~v~lr~~~~~~l~F~T~~~S~K~~eL~~np---~v~l~-f~~~~~~~qvrv~G~a~~~  120 (217)
T TIGR00558        48 EPNAMTLSTVDESGRPSSR---MVLLKELDERGFVFYTNYGSRKGHQIETNP---NAALV-FFWPDLERQVRVEGKVEKL  120 (217)
T ss_pred             CCceEEEEEECCCCCEEEE---EEEEEEECCCcEEEEECCCChHHHHHHhCC---cEEEE-EEeCCCCEEEEEEEEEEEC
Confidence            4554444443  5778777   799999999999999999999999999999   99999 6666 89999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++++||++||..||+.+|+|+||+++ ++++|++++.++.+++.+ .++|+|++|
T Consensus       121 ~~~~~~~~w~~~~~~sr~~~~~~~q~~~~~~~~~l~~~~~~~~~~~~~-~~~p~p~~f  177 (217)
T TIGR00558       121 PREESDAYFKSRPRGSRIGAWASRQSDVISNREELESKALKNTEKFED-AEIPRPDYW  177 (217)
T ss_pred             CHHHHHHHHHhCChhhcceEEcCCCCcccCCHHHHHHHHHHHHhhccC-CCCCCCCce
Confidence            99999999999999999999999999998 899999999999988864 358999997

This model is similar to Pyridox_oxidase from PFAM but is designed to find only true pyridoxamine-phosphate oxidase and to ignore the related protein PhzG involved in phenazine biosynthesis. This protein from E. coli was characterized as a homodimer with two FMN per dimer.

>KOG2586|consensus

Probab=99.59  E-value=1.6e-16  Score=134.33  Aligned_cols=49  Identities=33%  Similarity=0.525  Sum_probs=47.3

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|||+|+|+    ||||||++|+|++|++|.||++|||+|+||||.|++|..|
T Consensus       105 ~Aal~Fyw~~l~rQVRveG~ve~l~~ee~e~yf~srp~~SqIga~~s~qs~vI  157 (228)
T KOG2586|consen  105 NAALLFYWEDLNRQVRVEGIVEKLPREEAEAYFKSRPRASQIGAWASPQSEVI  157 (228)
T ss_pred             cceEEEeehhccceeEEEeccccCCHHHHHHHHhcCcchhhccceecCCCCcc
Confidence            599999996    9999999999999999999999999999999999999985

>COG0259 PdxH Pyridoxamine-phosphate oxidase [Coenzyme metabolism]

Probab=99.58  E-value=2e-16  Score=133.42  Aligned_cols=78  Identities=26%  Similarity=0.375  Sum_probs=64.1

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee-eEEEEeeeecCCceEEEecCCCchhh
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL-FRFLFLHVRVEGELEILTRDRFEDLY   82 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi-~R~VLLK~~de~Gf~F~Tn~~S~Kg~   82 (172)
                      |||++|+|+    ||||+|..|+|+.+++..||.+|||||+||||+++||..| .|.+|.|.+-+         .-.|..
T Consensus        94 ~Aal~F~W~~L~RQVrv~G~ve~vs~eesd~Yf~sRPr~S~iGAWAS~QS~~i~~r~~Le~~~ae---------~~~kf~  164 (214)
T COG0259          94 YAALLFPWKELERQVRVEGRVERVSDEESDAYFASRPRGSQIGAWASKQSRPIASRAALEAKVAE---------LTAKFA  164 (214)
T ss_pred             ceeEEecchhccceEEEeeeeeeCCHHHHHHHHhcCCCcCccchhhccCccccCCHHHHHHHHHH---------HHHhcC
Confidence            799999997    9999999999999999999999999999999999999985 45555444322         234555


Q ss_pred             ccccccccccceeeccCCCC
Q psy10276         83 NREPLYCKIRAHLCHPFWMA  102 (172)
Q Consensus        83 eL~~nP~~~~AAL~F~~w~l  102 (172)
                      +-+ +|||       .+|..
T Consensus       165 ~~~-iP~P-------~~WgG  176 (214)
T COG0259         165 DGE-IPRP-------PHWGG  176 (214)
T ss_pred             CCC-CCCC-------CCccc
Confidence            544 8999       99963

>PLN02918 pyridoxine (pyridoxamine) 5'-phosphate oxidase

Probab=99.17  E-value=5e-12  Score=118.68  Aligned_cols=49  Identities=29%  Similarity=0.502  Sum_probs=47.1

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|||+|+|+    ||||+|..|.++++.++.||.+|||+|+||||.++||..+
T Consensus       419 ~aal~F~w~~l~rQVRi~G~v~~~~~~es~~yf~sRp~~Sqi~A~aS~QS~~i  471 (544)
T PLN02918        419 SAALLFYWEELNRQVRVEGSVQKVPESESENYFHSRPRGSQIGAIVSKQSSVV  471 (544)
T ss_pred             cEEEEeeeccccEEEEEEEEEEECCHHHHHHHHHhCCccccceEEecCCCCcC
Confidence            689999996    9999999999999999999999999999999999999974

>PF01243 Pyridox_oxidase: Pyridoxamine 5'-phosphate oxidase; InterPro: IPR011576 Pyridoxamine 5'-phosphate oxidase (PNPOx; 1

Probab=98.96  E-value=2e-09  Score=74.48  Aligned_cols=83  Identities=19%  Similarity=0.247  Sum_probs=64.4

Q ss_pred             hhHhhhhhcccCcccccc--ccCCCCceeeEEEEeeeecC-CceEEEecCCCchhhccccccccccceeeccCCC-CCce
Q psy10276         30 DRFEDLYNREPLYCKIRA--HLCHPSSRLFRFLFLHVRVE-GELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKR  105 (172)
Q Consensus        30 ~~~~~~~~~~~~~~ki~a--~~g~PSsRi~R~VLLK~~de-~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQ  105 (172)
                      |....+++ ++..+-+++  .+|.|.++.   |.....++ ..+.|+|+..|+|.++|.+||   +|+|+|.... ..++
T Consensus         3 ~~~~~~l~-~~~~~~laTv~~dG~P~~~~---v~~~~~~~~~~i~~~t~~~~~k~~nl~~np---~v~l~~~~~~~~~~~   75 (89)
T PF01243_consen    3 EEIREFLE-ESKYCVLATVDEDGRPHASP---VWFVYDDDDNTIYFATNPGSRKVRNLRRNP---RVSLLFCDPEGTRRG   75 (89)
T ss_dssp             HHHHHHHH-STSEEEEEEEETTSEEEEEE---EEEEEECTTTEEEEEEETTSHHHHHHHHST---EEEEEEEETTTTTEE
T ss_pred             HHHHHHhc-CCCEEEEEEECCCCCEEEEE---EeeecCCceeEEEEeecCCCCchhhCccCC---eEEEEEEEcCcCceE
Confidence            34445555 556666776  567777774   44443333 479999999999999999999   9999966666 7899


Q ss_pred             EEEEEeeEEcCHHH
Q psy10276        106 VRVEGELEILTQDR  119 (172)
Q Consensus       106 VRIeG~vekl~~ee  119 (172)
                      |+|.|.|+.++++|
T Consensus        76 v~~~G~a~~~~d~E   89 (89)
T PF01243_consen   76 VRVSGTAEILTDEE   89 (89)
T ss_dssp             EEEEEEEEEESHHH
T ss_pred             EEEEEEEEEEcCCC
Confidence            99999999999987

4.3.5 from EC) is a FMN flavoprotein that catalyses the oxidation of pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P (PLP). This reaction serves as the terminal step in the de novo biosynthesis of PLP in Escherichia coli and as a part of the salvage pathway of this coenzyme in both E. coli and mammalian cells [, ]. The binding sites for FMN and for substrate have been highly conserved throughout evolution. This entry represents the FMN-binding domain present in pyridoxamine 5'-phosphate oxidases, as well as in a number of proteins that have not been demonstrated to have enzymatic activity. The FMN-binding domain has a structure consisting of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. PNPOx has a different dimerisation mode than that found in flavin reductases, which also carry an FMN-binding domain with a similar topology. ; GO: 0004733 pyridoxamine-phosphate oxidase activity, 0010181 FMN binding, 0055114 oxidation-reduction process; PDB: 2IG6_A 1CI0_A 2HQ7_B 2HTD_B 3EC6_A 1WV4_B 1DNL_A 1G76_A 1G79_A 1G77_A ....

>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional

Probab=98.89  E-value=2.2e-10  Score=105.36  Aligned_cols=49  Identities=27%  Similarity=0.515  Sum_probs=46.7

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|||+|+|+    ||||+|..|+++.+.++.||.+||++|+||||++.+|..+
T Consensus       337 ~aal~F~w~~~~rQvRv~G~a~~~~~~~s~~yf~~rp~~sq~~a~as~qs~~i  389 (462)
T PLN03049        337 KASLVFYWDGLHRQVRVEGSVEKVSEEESDQYFHSRPRGSQIGALVSKQSTVI  389 (462)
T ss_pred             cEEEEeecCCCCEEEEEEEEEEECCHHHHHHHHHhCChhhhhhheeCCCCCcC
Confidence            689999997    9999999999999999999999999999999999999863

>PF12766 Pyridox_oxase_2: Pyridoxamine 5'-phosphate oxidase; InterPro: IPR024624 Pyridoxamine 5'-phosphate oxidase catalyses the oxidation of pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P (PLP), the terminal step in the de novo biosynthesis of PLP in Escherichia coli and part of the salvage pathway of this coenzyme in both E

Probab=98.59  E-value=5.1e-08  Score=73.51  Aligned_cols=57  Identities=19%  Similarity=0.135  Sum_probs=46.7

Q ss_pred             eEEEEeeeecCC------ceEEEecCCCchhhccc-cccccccceeeccCCCCCceEEEEEeeEEcC
Q psy10276         57 FRFLFLHVRVEG------ELEILTRDRFEDLYNRE-PLYCKIRAHLCHPFWMASKRVRVEGELEILT  116 (172)
Q Consensus        57 ~R~VLLK~~de~------Gf~F~Tn~~S~Kg~eL~-~nP~~~~AAL~F~~w~l~RQVRIeG~vekl~  116 (172)
                      +|+|.|.+++++      -+.|+|+-.|.|..+|. .||   .++++|+.-...-|+||.|.+..++
T Consensus        37 ~RTvVlRgf~~~~~~~~~~L~f~TD~RS~Kv~~l~~~~p---~~e~~~~~~~~~~Q~Ri~G~a~ii~  100 (100)
T PF12766_consen   37 VRTVVLRGFDPDLKPESDLLTFHTDARSPKVAQLASANP---RVELVFWFPETREQFRIRGRASIIG  100 (100)
T ss_dssp             EEEEEEEEEETT----TTEEEEEEETTSHHHHHHH-H-----EEEEEEEECCCTEEEEEEEEEEEE-
T ss_pred             eeEEEEcCcccccccccCeEEEEecCCchhHHHHhccCC---CEEEEEEeCCccEEEEEEEEEEEEC
Confidence            468999999986      49999999999999999 999   9999933334889999999998763

coli and mammalian cells. This entry represents the FMN-binding domain of pyridoxamine 5'-phosphate oxidases that belong to the Alr4036 family.; GO: 0010181 FMN binding; PDB: 2I51_B 2OU5_B.

>TIGR03618 Rv1155_F420 PPOX class probable F420-dependent enzyme

Probab=98.47  E-value=2.4e-07  Score=67.62  Aligned_cols=65  Identities=17%  Similarity=0.049  Sum_probs=50.8

Q ss_pred             ccCCCCceeeEEEEe-eeecCCceEEEecCCCchhhccccccccccceeeccCCC-CC-ceEEEEEeeEEcCHHH
Q psy10276         48 HLCHPSSRLFRFLFL-HVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-AS-KRVRVEGELEILTQDR  119 (172)
Q Consensus        48 ~~g~PSsRi~R~VLL-K~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~-RQVRIeG~vekl~~ee  119 (172)
                      .+|.|..+.   |.. ...+++.+.|+|+..|+|.++|+.||   +|+|+ +++. .. ++|+|+|.++.+++++
T Consensus         7 ~~G~P~~~p---v~~~~~~~~~~l~f~t~~~s~k~~~l~~np---~v~l~-~~~~~~~~~~v~i~G~a~~v~d~~   74 (117)
T TIGR03618         7 ADGRPQLSP---VWFGVDPDGDILVVSTTAGRAKARNLRRDP---RVSLS-VLDPDFPYRYVEVEGTAELVEDPD   74 (117)
T ss_pred             CCCCEEEEE---EEEEEcCCCCEEEEEecCCcHhhHhhhhCC---eEEEE-EECCCCCccEEEEEEEEEEecCCc
Confidence            467787773   222 22244458899999999999999999   99999 6665 44 8999999999998754

A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes.

>TIGR03667 Rv3369 PPOX class probable F420-dependent enzyme, Rv3369 family

Probab=98.24  E-value=4.5e-06  Score=64.03  Aligned_cols=77  Identities=17%  Similarity=0.100  Sum_probs=56.4

Q ss_pred             Ccccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCC-C-CCceEEEEEeeEEcC
Q psy10276         41 LYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFW-M-ASKRVRVEGELEILT  116 (172)
Q Consensus        41 ~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w-~-l~RQVRIeG~vekl~  116 (172)
                      +.+-+++  .+|.|..+-  |.+.  .+++.+.|+|+..|+|.++|..||   +|+|+ ++. . ..++|+|+|+++.++
T Consensus        15 ~~~~LaT~~~dG~P~~~P--~~~~--~~d~~l~~~t~~~s~K~~~l~~np---~Vsl~-~~~~~~~~~~v~v~G~a~i~~   86 (130)
T TIGR03667        15 SIVWLTTVRRSGQPQPVP--VWFL--WDGTEFLIYSRPQAAKLRNIRRNP---RVSLH-LNSDGRGGDVVVFTGTAEVVA   86 (130)
T ss_pred             CeEEEEEECCCCceEEEE--EEEE--EECCEEEEEeCCcCHHHHHHhhCC---cEEEE-EEcCCCCceEEEEEEEEEEeC
Confidence            3344444  477888873  2332  356778899999999999999999   99999 444 3 348999999999987


Q ss_pred             HH----HHHHHHh
Q psy10276        117 QD----RFEDLYN  125 (172)
Q Consensus       117 ~e----esd~YF~  125 (172)
                      +.    +.++|++
T Consensus        87 d~~~~~~~~~~~~   99 (130)
T TIGR03667        87 DAPPAREIPAYLA   99 (130)
T ss_pred             CchhHHHHHHHHH
Confidence            55    4445554

A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN.

>PRK05679 pyridoxamine 5'-phosphate oxidase; Provisional

Probab=98.16  E-value=1e-06  Score=72.37  Aligned_cols=49  Identities=29%  Similarity=0.440  Sum_probs=46.2

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +++|+|+|+    ||||+|.++.++.+.++.||..+|+++++++|.++|+..+
T Consensus        75 ~val~~~~~~~~~qvrv~G~a~~~~~~~~~~~w~~~p~~~r~~~~~~~qg~~i  127 (195)
T PRK05679         75 KAALLFPWKSLERQVRVEGRVEKVSAEESDAYFASRPRGSQIGAWASKQSRPI  127 (195)
T ss_pred             cEEEEEecCCCCEEEEEEEEEEEeCHHHHHHHHHhCCHhhhceeeeCCCCCcc
Confidence            578999996    9999999999999999999999999999999999999984

>TIGR00558 pdxH pyridoxamine-phosphate oxidase

Probab=97.86  E-value=8.7e-06  Score=68.34  Aligned_cols=49  Identities=31%  Similarity=0.537  Sum_probs=46.1

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +++|+|+|+    ||||+|..+.++.+.+..||.++|+++++.+|.++|+..+
T Consensus        97 ~v~l~f~~~~~~~qvrv~G~a~~~~~~~~~~~w~~~~~~sr~~~~~~~q~~~~  149 (217)
T TIGR00558        97 NAALVFFWPDLERQVRVEGKVEKLPREESDAYFKSRPRGSRIGAWASRQSDVI  149 (217)
T ss_pred             cEEEEEEeCCCCEEEEEEEEEEECCHHHHHHHHHhCChhhcceEEcCCCCccc
Confidence            478999995    9999999999999999999999999999999999999973

This model is similar to Pyridox_oxidase from PFAM but is designed to find only true pyridoxamine-phosphate oxidase and to ignore the related protein PhzG involved in phenazine biosynthesis. This protein from E. coli was characterized as a homodimer with two FMN per dimer.

>COG3871 Uncharacterized stress protein (general stress protein 26) [General function prediction only]

Probab=97.51  E-value=0.00017  Score=58.49  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=59.6

Q ss_pred             Ccccccc-----ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCCCceEEEEEeeEEc
Q psy10276         41 LYCKIRA-----HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEIL  115 (172)
Q Consensus        41 ~~~ki~a-----~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG~vekl  115 (172)
                      .++|+|.     .+|+|.+|.  |.+..+-...-+-|+||.+|+|.++|+.||   +|+++|-+-.-.-=|-|+|++|.+
T Consensus        15 e~~kv~~l~tv~~~g~phsRp--M~f~hdg~~~tiwf~T~kds~~v~eik~n~---~v~v~~~~~~~~~fv~v~Gtael~   89 (145)
T COG3871          15 EGSKVGMLATVQENGHPHSRP--MTFNHDGPKGTIWFFTNKDSRKVEEIKKNP---KVCVLFGYDDHDAFVEVSGTAELV   89 (145)
T ss_pred             hhCceEEEEEecCCCCccccc--eeccCCCCcccEEeeccCchHHHHHHhhCC---cEEEEEecCCCcceEEEEEEEEee
Confidence            3555553     578999995  454433223668899999999999999999   999997777666679999999999


Q ss_pred             CHHHH-HHHH
Q psy10276        116 TQDRF-EDLY  124 (172)
Q Consensus       116 ~~ees-d~YF  124 (172)
                      .+... |.+|
T Consensus        90 ~dra~~d~~W   99 (145)
T COG3871          90 EDRAKIDELW   99 (145)
T ss_pred             ccHHHHHHhh
Confidence            76543 4444

>TIGR03666 Rv2061_F420 PPOX class probable F420-dependent enzyme, Rv2061 family

Probab=96.59  E-value=0.0065  Score=47.19  Aligned_cols=70  Identities=13%  Similarity=-0.013  Sum_probs=50.3

Q ss_pred             cccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEcCHHHHHHH
Q psy10276         47 AHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEILTQDRFEDL  123 (172)
Q Consensus        47 a~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl~~eesd~Y  123 (172)
                      ..+|.|..+-   |.. ..+++.+.|+|..+++|.++|..||   +|++++.=-. -.+-|.|+|+++.++++|.++-
T Consensus        21 ~~dG~P~~~P---v~~-~~d~g~l~f~t~~~~~K~~nl~~np---~Vsl~v~~~~~~~~~v~v~G~A~~v~~~e~~~~   91 (132)
T TIGR03666        21 RKDGTPVPTP---VWA-AVDGDKLLVRTKEDSWKVKRIRNNP---RVTLAPCDRRGRPTGPVVPGRARILDGAETARA   91 (132)
T ss_pred             CCCCcEEEEE---EEE-EEECCEEEEEECCcCHHHHHHHhCC---CEEEEEECCCCCEeEEEEEEEEEEEcchhHHHH
Confidence            3455555552   222 3567889999999999999999999   9999842111 1135999999999987777643

A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN.

>PRK03467 hypothetical protein; Provisional

Probab=95.69  E-value=0.032  Score=45.11  Aligned_cols=63  Identities=14%  Similarity=0.052  Sum_probs=52.6

Q ss_pred             ecCCce--EEEecCCCchhhccccccccccceeeccCC----CCCceEEEEEeeEEcCHHH----HHHHHhhCCCC
Q psy10276         65 RVEGEL--EILTRDRFEDLYNREPLYCKIRAHLCHPFW----MASKRVRVEGELEILTQDR----FEDLYNREPLY  130 (172)
Q Consensus        65 ~de~Gf--~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w----~l~RQVRIeG~vekl~~ee----sd~YF~sRPr~  130 (172)
                      +|++++  .|.|+.+|+.++.+.+||   ++|.+-.--    ..-+-|-++|.+..|+.+|    -+.|+..=|..
T Consensus        39 fd~~~~~l~~~S~~~TrH~~~~~~np---~VAgTI~~~~~~v~~I~GvQ~~G~~~~l~~~e~~~Ar~~Y~~rFP~A  111 (144)
T PRK03467         39 FDAQKVAFYLLTEEKTRHGQMMGPNA---QVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDAARKRYNRRFPVA  111 (144)
T ss_pred             EcCCCeEEEEEcCCCCHHHHHHhhCC---CEEEEEcCCCcchhhceEEEEEEEEEecChhHHHHHHHHHHHhCcch
Confidence            577666  688999999999999999   999984332    2556777999999999999    88999998865

>COG5135 Uncharacterized conserved protein [Function unknown]

Probab=95.15  E-value=0.015  Score=50.27  Aligned_cols=85  Identities=14%  Similarity=0.136  Sum_probs=61.9

Q ss_pred             cCCCCceeeEEEEeeeec-----CCceEEEecCCCchhhcccccc--------ccccceeeccCCCCCceEEEEEeeEEc
Q psy10276         49 LCHPSSRLFRFLFLHVRV-----EGELEILTRDRFEDLYNREPLY--------CKIRAHLCHPFWMASKRVRVEGELEIL  115 (172)
Q Consensus        49 ~g~PSsRi~R~VLLK~~d-----e~Gf~F~Tn~~S~Kg~eL~~nP--------~~~~AAL~F~~w~l~RQVRIeG~vekl  115 (172)
                      .+.|..|   +|.+.++-     .+-++|-|+..|.|..||..-|        -|-.+-+||++...-.|+||.|.+-.+
T Consensus        35 ~~~PrnR---TVvfRgFl~~D~~tn~L~F~TD~rS~Ki~ei~~qp~~~~~s~~~~~~fEaC~yfP~T~eQ~RisGQ~~l~  111 (245)
T COG5135          35 TNKPRNR---TVVFRGFLFHDKRTNVLTFNTDMRSSKITEIFIQPNSNNSSDSKTPFFEACFYFPETWEQYRISGQCFLI  111 (245)
T ss_pred             CCCCccc---eEEEeeeeecccccceEEEecchhhhhhhHHhhccccCCCCCCCccHHHHHhcccchhhheEeeeeEEEE
Confidence            3778887   45555543     4578999999999999997665        111677884444488999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeec
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLC  138 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS  138 (172)
                      +.+.++.-|  -|..+-+--..+
T Consensus       112 s~~~~~~~~--~Pa~~~t~d~l~  132 (245)
T COG5135         112 SKQFKYDIF--SPAFSETNDDLT  132 (245)
T ss_pred             chhhcCccc--Cchhhhhhhhhc
Confidence            999997766  466555544444

>TIGR03668 Rv0121_F420 PPOX class probable F420-dependent enzyme, Rv0121 family

Probab=94.57  E-value=0.11  Score=41.03  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=49.5

Q ss_pred             hhhhcccCcccccc--ccCCCCceeeEEEEeeeec-------CCceEEEe------cCCCchhhccccccccccceeecc
Q psy10276         34 DLYNREPLYCKIRA--HLCHPSSRLFRFLFLHVRV-------EGELEILT------RDRFEDLYNREPLYCKIRAHLCHP   98 (172)
Q Consensus        34 ~~~~~~~~~~ki~a--~~g~PSsRi~R~VLLK~~d-------e~Gf~F~T------n~~S~Kg~eL~~nP~~~~AAL~F~   98 (172)
                      .++. .++.+.+++  .+|.|...=+-++    ++       ++.+.|.+      --+++|.++|..||   ++||++.
T Consensus         7 ~~L~-~~~~~~LaTv~~dG~P~vvPv~f~----~d~~~~~~~~~~i~~~~~~~~~t~~~~~K~~ni~~nP---rVs~~v~   78 (141)
T TIGR03668         7 TRFA-QARVARLATVSPDGEPHLVPVVFA----VGAGAVAAGDAVIYTAVDAKPKTTPRLRRLRNIEENP---RVSLLVD   78 (141)
T ss_pred             HHHc-cCCEEEEEEECCCCCeEEEeEEEE----EccccccCCCCEEEEEecCCCCcccccHHHHHHhhCC---CEEEEEe
Confidence            3444 456666764  4567776632233    23       33333332      23578999999999   9999842


Q ss_pred             ----CCCCCceEEEEEeeEEcCHHH
Q psy10276         99 ----FWMASKRVRVEGELEILTQDR  119 (172)
Q Consensus        99 ----~w~l~RQVRIeG~vekl~~ee  119 (172)
                          -|.-.+.|.|+|+++.+++++
T Consensus        79 ~~~~~~~~~~~v~v~G~a~~~~d~~  103 (141)
T TIGR03668        79 RYDDDWTRLWWVRADGRAEILRPGE  103 (141)
T ss_pred             cCCCCccceEEEEEEEEEEEecCCc
Confidence                122224699999999998886

A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN.

>PRK06733 hypothetical protein; Provisional

Probab=90.35  E-value=0.95  Score=36.93  Aligned_cols=79  Identities=14%  Similarity=0.079  Sum_probs=57.4

Q ss_pred             hhhhhcccCc-ccccc-ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCCCceEEEEE
Q psy10276         33 EDLYNREPLY-CKIRA-HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEG  110 (172)
Q Consensus        33 ~~~~~~~~~~-~ki~a-~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG  110 (172)
                      .++++..|.. .-..+ .+|-|..--+-.  .+-.|++-+.|--|+.|+=..+|.+||   +|+|+ +|++ +.-..|.|
T Consensus        14 ~~~L~~~~~~~laTv~kedG~Pnv~~Isw--v~a~d~~tIr~A~~~~skT~~NLk~Np---~v~I~-~~~~-~~~yqIkG   86 (151)
T PRK06733         14 VQLLRKERIVTLATTDFEKQVPNVSAISW--VYAVSKTSIRFAVDQRSRIVENIRHNP---GVVLT-IIAN-ESVYSISG   86 (151)
T ss_pred             HHHHcCCceEEEEEEccCCCceeEEEEEE--EEEcCCCEEEEEEccCcHhHHHHhhCC---cEEEE-EEeC-CcEEEEEE
Confidence            3455555543 33344 378998774333  455788999999999999999999999   99999 6665 33377888


Q ss_pred             eeEEcCHH
Q psy10276        111 ELEILTQD  118 (172)
Q Consensus       111 ~vekl~~e  118 (172)
                      .++.+++.
T Consensus        87 ~a~i~~e~   94 (151)
T PRK06733         87 AAEILTDR   94 (151)
T ss_pred             EEEEEeee
Confidence            88877744

>COG5015 Uncharacterized conserved protein [Function unknown]

Probab=85.97  E-value=2.8  Score=33.81  Aligned_cols=73  Identities=16%  Similarity=0.185  Sum_probs=55.4

Q ss_pred             cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCCCceEEEEEeeEEcCHHHHHH-HHhhC
Q psy10276         49 LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQDRFED-LYNRE  127 (172)
Q Consensus        49 ~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG~vekl~~eesd~-YF~sR  127 (172)
                      +|.|.+|.+-.+|+   +.+-+-|.|+-+-.=.++|.+||   .+++| -.-.=.--||++|.|+-+++-+-.. -|..-
T Consensus        21 ~gkPrvRpfq~~f~---~g~KlYfcTantK~~yKqik~np---~vefc-g~~kdg~~vrlrg~a~f~~nielkk~ale~y   93 (132)
T COG5015          21 DGKPRVRPFQVMFV---EGEKLYFCTANTKPYYKQIKKNP---EVEFC-GMDKDGVMVRLRGRAEFVENIELKKLALEIY   93 (132)
T ss_pred             CCCcceeeccceee---eCCEEEEEeCCChHHHHHHhhCC---CeEEE-EecCCceEEEEeeeEEeccchHHHHHHhhhc
Confidence            67777775445553   55788899999988899999999   99999 4444455699999999998877665 44444


Q ss_pred             C
Q psy10276        128 P  128 (172)
Q Consensus       128 P  128 (172)
                      |
T Consensus        94 P   94 (132)
T COG5015          94 P   94 (132)
T ss_pred             h
Confidence            4

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	172
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 6e-05
 Identities = 31/174 (17%), Positives = 52/174 (29%), Gaps = 38/174 (21%)

Query: 16  KNVRVEGELEILTRD------------RFEDLYNRE-----PLYCKIRAHLCHPSSRLFR 58
            ++ ++     LT D            R +DL  RE     P    I A         + 
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWD 345

Query: 59  FLFLHVR-------VEGELEILT----RDRFEDL--YNREPLYCKIRAHLCHPFWMASKR 105
             + HV        +E  L +L     R  F+ L  +   P    I   L    W    +
Sbjct: 346 N-WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF---PPSAHIPTILLSLIWFDVIK 401

Query: 106 VRVEGELEILTQDRFEDLYNREPLYCKIRAHLCHQDQATDWDEAKATHDAIYDK 159
             V     ++ +     L  ++P    I     + +     +   A H +I D 
Sbjct: 402 SDVM---VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	172
1ci0_A	228	Protein (PNP oxidase); B6 metabolism, structural g	100.0
2a2j_A	246	Pyridoxamine 5'-phosphate oxidase; beta barrel, st	100.0
1nrg_A	261	Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidore	100.0
1dnl_A	199	Pyridoxine 5'-phosphate oxidase; beta barrel, prot	99.98
1ty9_A	222	Phenazine biosynthesis protein PHZG; chorismate, o	99.97
2i51_A	195	Uncharacterized conserved protein of COG5135; pyri	99.91
2ou5_A	175	Pyridoxamine 5'-phosphate oxidase-related, FMN-BI;	99.85
2qea_A	160	Putative general stress protein 26; structural gen	99.35
2ig6_A	150	NIMC/NIMA family protein; structural genomics, joi	99.3
3dmb_A	147	Putative general stress protein 26 with A PNP-OXI	99.18
2hhz_A	150	Pyridoxamine 5'-phosphate oxidase-related; structu	99.17
3u35_A	182	General stress protein; PNP-oxidase like fold, FMN	98.95
1ci0_A	228	Protein (PNP oxidase); B6 metabolism, structural g	98.92
2iab_A	155	Hypothetical protein; NP_828636.1, structural geno	98.91
2re7_A	134	Uncharacterized protein; general stress protein CO	98.85
2a2j_A	246	Pyridoxamine 5'-phosphate oxidase; beta barrel, st	98.82
2i02_A	148	General stress protein of COG3871; pyridoxamine 5'	98.79
1vl7_A	157	Hypothetical protein ALR5027; structural genomics,	98.68
3ec6_A	139	General stress protein 26; alpha-beta structure, s	98.66
1dnl_A	199	Pyridoxine 5'-phosphate oxidase; beta barrel, prot	98.6
2htd_A	140	Predicted flavin-nucleotide-binding protein from f	98.6
1ty9_A	222	Phenazine biosynthesis protein PHZG; chorismate, o	98.6
3db0_A	128	LIN2891 protein; putative pyridoxamine 5'-phosphat	98.59
1nrg_A	261	Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidore	98.57
2hq7_A	146	Protein, related to general stress protein 26(GS2	98.45
3ba3_A	145	Protein LP_0091, pyridoxamine 5'-phosphate oxidase	98.24
2fhq_A	141	Putative general stress protein; alpha-beta struct	98.18
3f7e_A	131	Pyridoxamine 5'-phosphate oxidase-related, FMN- bi	98.15
2asf_A	137	Hypothetical protein RV2074; H37RV, structural gen	97.96
1rfe_A	162	Hypothetical protein RV2991; structural genomics,	97.83
2ou5_A	175	Pyridoxamine 5'-phosphate oxidase-related, FMN-BI;	97.8
2aq6_A	147	Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phos	97.61
2i51_A	195	Uncharacterized conserved protein of COG5135; pyri	97.58
3tgv_A	148	Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}	97.27
2q9k_A	151	Uncharacterized protein; split barrel-like fold, s	97.22
2arz_A	247	Hypothetical protein PA4388; hypothetical protein,	96.88
3u5w_A	148	Putative uncharacterized protein; ssgcid, seattle	96.8
3cp3_A	148	Uncharacterized protein; alpha-beta fold, structur	96.69
2hq9_A	149	MLL6688 protein; structural genomics, joint center	96.68
1xhn_A	184	CREG, cellular repressor of E1A-stimulated genes;	96.15
3dnh_A	258	Uncharacterized protein ATU2129; APC6114, agrobact	95.8
2fg9_A	178	5-nitroimidazole antibiotic resistance protein; ST	95.79
2ig6_A	150	NIMC/NIMA family protein; structural genomics, joi	95.73
2fur_A	209	Hypothetical protein; structural genomics, joint c	95.24
2hti_A	185	BH0577 protein; structural genomics, joint center	95.21
2vpa_A	216	NIMA-related protein; cofactor, atomic resolution,	94.81
3swj_A	251	CHUZ, putative uncharacterized protein; heme oxyge	94.37
3fkh_A	138	Putative pyridoxamine 5'-phosphate oxidase; NP_601	92.79
2hhz_A	150	Pyridoxamine 5'-phosphate oxidase-related; structu	91.45
3in6_A	148	FMN-binding protein; structural genomics, joint ce	90.78
3dmb_A	147	Putative general stress protein 26 with A PNP-OXI	88.91
3gas_A	259	Heme oxygenase; FMN-binding split barrel, oxidored	85.94
3a6r_A	122	FMN-binding protein; electron transport, flavoprot	83.6

>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1

Probab=100.00  E-value=2.7e-37  Score=257.75  Aligned_cols=127  Identities=20%  Similarity=0.234  Sum_probs=115.1

Q ss_pred             ccCcccccc---ccCCCCceeeEEEEeeeecCCceEEEecCC-CchhhccccccccccceeeccCCC-CCceEEEEEeeE
Q psy10276         39 EPLYCKIRA---HLCHPSSRLFRFLFLHVRVEGELEILTRDR-FEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELE  113 (172)
Q Consensus        39 ~~~~~ki~a---~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~-S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~ve  113 (172)
                      +|.-+-+++   .+|.|++|   +|+||++|++||+||||++ |+|+++|++||   +|||| |+|+ +.|||||+|.|+
T Consensus        54 ~~~~~~LATvd~~dG~P~~R---~V~lk~~d~~g~~F~Tn~~~S~K~~eL~~NP---~val~-f~~~~~~rqVrI~G~ae  126 (228)
T 1ci0_A           54 LPEAITFSSAELPSGRVSSR---ILLFKELDHRGFTIYSNWGTSRKAHDIATNP---NAAIV-FFWKDLQRQVRVEGITE  126 (228)
T ss_dssp             CTTEEEEEEEETTTTEEEEE---EEECCEECSSSEEEEEECSSSHHHHHHHHCC---EEEEE-EEETTTTEEEEEEEEEE
T ss_pred             CCCEEEEEEeeCCCCCeEEE---EEEEEEECCCEEEEEeCCCCCcchHHHhhCC---eEEEE-EEeCCCCEEEEEEEEEE
Confidence            466666765   35667776   7999999999999999999 99999999999   99999 5565 999999999999


Q ss_pred             EcCHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        114 ILTQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       114 kl~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++++++||++||++||||||+|+||++| ||+.|+++++++.++|.++.++|+|+||
T Consensus       127 ~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~~~~~p~p~~w  186 (228)
T 1ci0_A          127 HVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYW  186 (228)
T ss_dssp             ECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTTE
T ss_pred             EcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcCCCCCCCCCcE
Confidence            9999999999999999999999999999998 9999999999999999765449999997

>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=100.00  E-value=2.6e-36  Score=255.55  Aligned_cols=127  Identities=12%  Similarity=0.137  Sum_probs=114.3

Q ss_pred             ccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEcC
Q psy10276         39 EPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEILT  116 (172)
Q Consensus        39 ~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl~  116 (172)
                      +|.-+-+++. +|.|++|   +|+||++|++||+||||++|+|++||++||   +|+|| |+|+ +.|||||+|.|++++
T Consensus        79 e~~~~~LATvddG~P~~R---~Vllk~~d~~gl~F~Tn~~S~K~~eL~~NP---~vaL~-f~~~~~~rqVrI~G~ae~v~  151 (246)
T 2a2j_A           79 EPNAMVLATVADGKPVTR---SVLCKILDESGVAFFTSYTSAKGEQLAVTP---YASAT-FPWYQLGRQAHVQGPVSKVS  151 (246)
T ss_dssp             STTEEEEEEEETTEEEEE---EEEEEEEETTEEEEEEETTSHHHHHHHHSC---EEEEE-EEEGGGTEEEEEEEEEEECC
T ss_pred             CCceEEEEEcCCCceEEE---EEEEEEEcCCEEEEEEcCCChhhHHHhhCC---eEEEE-EEeCCCCEEEEEEEEEEEec
Confidence            4555555554 5666666   799999999999999999999999999999   99999 6665 999999999999999


Q ss_pred             HHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        117 QDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       117 ~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++++||++||++||||||+|+||++| ||+.|+++++++.++|.++.++|+|++|
T Consensus       152 ~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~~vp~pp~w  208 (246)
T 2a2j_A          152 TEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGW  208 (246)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTE
T ss_pred             cHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCCCCCCCCcE
Confidence            9999999999999999999999999999 9999999999999999754369999987

>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*

Probab=100.00  E-value=1e-33  Score=240.97  Aligned_cols=126  Identities=20%  Similarity=0.265  Sum_probs=114.5

Q ss_pred             ccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         39 EPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        39 ~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      +|.-+-+++.  +|.|++|   +|+||++|++||+||||++|+|+++|++||   +|||| |+|+ +.|||||+|.|+++
T Consensus        77 e~~~~~LATvd~dG~P~~R---~V~lk~~d~~gl~F~Tn~~S~K~~eL~~NP---~vaL~-f~~~~~~rqVrI~G~ae~v  149 (261)
T 1nrg_A           77 EANAMCLATCTRDGKPSAR---MLLLKGFGKDGFRFFTNFESRKGKELDSNP---FASLV-FYWEPLNRQVRVEGPVKKL  149 (261)
T ss_dssp             CTTEEEEEEECTTSCEEEE---EEECCCEETTEEEEEEETTSHHHHHHHHSC---EEEEE-EEEGGGTEEEEEEEEEEEC
T ss_pred             CCcEEEEEEECCCCCeeEE---EEEEEEEcCCEEEEEECCCChhHHHHhhCC---eEEEE-EEeCCCCEEEEEEEEEEEe
Confidence            4566666654  4677776   799999999999999999999999999999   99999 5554 99999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++++||++||++|||+||+|+||++| +|++|+++++++.++|+++ ++|+|++|
T Consensus       150 ~d~e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~-~vp~p~~w  206 (261)
T 1nrg_A          150 PEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQ-EVPKPKSW  206 (261)
T ss_dssp             CHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTS-CCCCCTTE
T ss_pred             cCcchHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccC-CCCCCCcE
Confidence            99999999999999999999999999998 8999999999999999864 69999987

>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*

Probab=99.98  E-value=1.8e-33  Score=227.90  Aligned_cols=126  Identities=18%  Similarity=0.217  Sum_probs=114.5

Q ss_pred             ccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         39 EPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        39 ~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      .|..+-+++.  +|.|++|   +|++|+++++||.||||++|+|+++|++||   +|+|| |+|+ +.|||||+|+|+++
T Consensus        30 ~~~~~~LATv~~dG~P~~R---~v~~~~~d~~gl~F~T~~~S~K~~~L~~np---~v~l~-f~~~~~~~qvri~G~a~~v  102 (199)
T 1dnl_A           30 DPTAMVVATVDEHGQPYQR---IVLLKHYDEKGMVFYTNLGSRKAHQIENNP---RVSLL-FPWHTLERQVMVIGKAERL  102 (199)
T ss_dssp             CTTEEEEEEECTTSCEEEE---EEECCEEETTEEEEEEETTSHHHHHHHHCC---EEEEE-ECCGGGTEEEEEEEEEEEC
T ss_pred             CCcEEEEEEECCCCCEEEE---EEEEEEEcCCEEEEEECCCCHHHHHHhhCC---eEEEE-EEcCCCCEEEEEEEEEEEe
Confidence            5666666664  5777776   799999999999999999999999999999   99999 6665 89999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++++||++||++|||+||+|+||+++ +|++|+++++++.++|+++ ++|+|++|
T Consensus       103 ~d~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~-~~p~p~~~  159 (199)
T 1dnl_A          103 STLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQG-EVPLPSFW  159 (199)
T ss_dssp             CHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTS-SCCCCTTE
T ss_pred             CCccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCC-CCCCCCce
Confidence            99999999999999999999999999998 8999999999999999754 59999987

>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*

Probab=99.97  E-value=3e-32  Score=225.79  Aligned_cols=124  Identities=15%  Similarity=0.183  Sum_probs=111.2

Q ss_pred             ccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         39 EPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        39 ~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      .|+.+-+++.  +|.|++|   +|+||++|++||+||||++|+|++||++||   +|||| |+|+ +.|||||+|+|+++
T Consensus        55 ~~~~~~LATvd~dG~P~~R---~v~l~~~d~~gl~F~T~~~S~K~~eL~~nP---~val~-f~~~~~~rqvrI~G~ae~v  127 (222)
T 1ty9_A           55 EPRALALATADSQGRPSTR---IVVISEISDAGVVFSTHAGSQKGRELLHNP---WASGV-LYWRETSQQIILNGQAVRL  127 (222)
T ss_dssp             STTEEEEEEECTTCCEEEE---EEECCEECSSEEEEEEETTSHHHHHHHHCC---EEEEE-EEETTTTEEEEEEEEEEEC
T ss_pred             CCCEEEEEEECCCCCEEEE---EEEEEEEcCCEEEEEECCCCcchHHHhhCC---eEEEE-EEcCCCCeEEEEEEEEEEE
Confidence            5677777764  4677776   799999999999999999999999999999   99999 5555 99999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++++||++||++|||+||+|+||+++ +|++|+++++++.++   +.++|+|++|
T Consensus       128 ~~~~~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~---~~~~p~p~~w  182 (222)
T 1ty9_A          128 PNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAEL---QGPLPRPEGY  182 (222)
T ss_dssp             CHHHHHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTS---CSCCCCCTTE
T ss_pred             ccHHhHHHHHhCccccccceeeccCCCcCCChHHHHHHHHHHhhc---cCCCCCCCCE
Confidence            99999999999999999999999999998 999999998887765   2358999987

>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}

Probab=99.91  E-value=4.5e-26  Score=183.76  Aligned_cols=116  Identities=13%  Similarity=0.180  Sum_probs=96.7

Q ss_pred             Cccccccc--cCCCCceeeEEEEeeeecCC--ceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         41 LYCKIRAH--LCHPSSRLFRFLFLHVRVEG--ELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        41 ~~~ki~a~--~g~PSsRi~R~VLLK~~de~--Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      +.+-+++.  +|.|++|   +|+||++|++  ||+||||+.|+|+++|++||   +|+|| |+|+ +.|||||+|+|+++
T Consensus        25 ~~~~LATv~~dG~P~~R---~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np---~v~l~-f~~~~~~~qvri~G~a~~v   97 (195)
T 2i51_A           25 RYLQLATVQPNGRPANR---TLVFRGFLEDTNQLRFITDTRSAKADQIQQQP---WAEIC-WYFPNTREQFRMAGDLTLI   97 (195)
T ss_dssp             GEEEEEEECTTSCEEEE---EEECCCBCTTSSCEEEEEETTSHHHHHHHHCC---EEEEE-EEETTTTEEEEEEEEEEEE
T ss_pred             CEEEEEEECCCCCeeEE---EEEEEEEcCCCCeEEEEEcCCccHHHHHhhCC---eEEEE-EEeCCCCEEEEEEEEEEEE
Confidence            35666654  5777776   7999999986  99999999999999999999   99999 5665 99999999999999


Q ss_pred             CHHHHH--------HHHhhCCCCCcc-eeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFE--------DLYNREPLYCKI-RAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd--------~YF~sRPr~SQI-gAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++++        +||+++|.+||+ ++|+|+| +++ +.+      +++.++|.  +++|+|+||
T Consensus        98 ~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg-~~~~~~~------~~~~~~~~--~~~p~p~~w  155 (195)
T 2i51_A           98 SSDDSHQDLQPARIAMWQELSDAARLQFGWPYPG-KPRIKES------GAFEPSPP--DPIEPVPNF  155 (195)
T ss_dssp             CSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTT-SBCCCCG------GGGCCCCC--CSSSCCTTE
T ss_pred             ChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCC-CCccchh------HHhhhhcc--CCCCCCCce
Confidence            999997        999999999999 5999987 666 332      23455665  358999987

>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}

Probab=99.85  E-value=5.9e-23  Score=163.36  Aligned_cols=94  Identities=18%  Similarity=0.128  Sum_probs=82.4

Q ss_pred             Cccccccc--cCCCCceeeEEEEeeeecC--CceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         41 LYCKIRAH--LCHPSSRLFRFLFLHVRVE--GELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        41 ~~~ki~a~--~g~PSsRi~R~VLLK~~de--~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      +.+-+++.  +| |++|   +|++|++++  +||.|+||+.|+|+++|++||   +|+|+ |||+ +.+||||+|+|+++
T Consensus        30 ~~~~LATv~~dG-P~~R---~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP---~v~l~-f~~~~~~~qvri~G~a~~~  101 (175)
T 2ou5_A           30 RHPTLATIGTDG-PDLR---TLVLRAASHAEATLEFHTDAASPKVAHIRRDA---RVAIH-IWIPKASLQVRAKAIAKIL  101 (175)
T ss_dssp             GSCEEEEEETTE-EEEE---ECCCCEEETTTTEEEEEEETTSHHHHHHHHCC---EEEEE-EEEGGGTEEEEEEEEEEEE
T ss_pred             ceEEEEEeCCCC-Ccee---EEEEEEEEcCCCEEEEEECCCChHHHHHhhCC---cEEEE-EEeCCCCEEEEEEEEEEEe
Confidence            44555543  57 8776   789999864  899999999999999999999   99999 5665 99999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecC-CCCcc-C
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCH-QDQAT-D  145 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~-QS~~i-~  145 (172)
                      +++  ++||+++|++||++ |+|+ ||+++ +
T Consensus       102 ~d~--~~~w~~~~~~~~~~-~~~~~~~~~~~~  130 (175)
T 2ou5_A          102 PGD--PNLFAQLPEAARMN-YQGPVPGTPLPA  130 (175)
T ss_dssp             ECC--HHHHHHSCHHHHGG-GSSSCTTCBSSC
T ss_pred             CcH--HHHHHHCCHhHHhc-ccCCCCCCcccc
Confidence            998  99999999999999 8985 99998 6

>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}

Probab=99.35  E-value=1.6e-12  Score=100.16  Aligned_cols=83  Identities=10%  Similarity=-0.074  Sum_probs=67.3

Q ss_pred             hhhHhhhhhcccCccccccccCCCCceeeEEEEeeeecCCc--eEEEecCCCchhhcccccccccc-ceeeccCCCCCce
Q psy10276         29 RDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGE--LEILTRDRFEDLYNREPLYCKIR-AHLCHPFWMASKR  105 (172)
Q Consensus        29 ~~~~~~~~~~~~~~~ki~a~~g~PSsRi~R~VLLK~~de~G--f~F~Tn~~S~Kg~eL~~nP~~~~-AAL~F~~w~l~RQ  105 (172)
                      .+....+.+ +++.+-+++ +|.|++|   .|+++..+++|  |.|+||+.|+|+++|+.||   + |||+|.+....||
T Consensus         6 ~~~~~~~L~-~~~~~~LaT-dG~P~~r---pv~~~~~~~~g~~l~f~t~~~s~K~~~l~~np---~~v~l~~~~~~~~~~   77 (160)
T 2qea_A            6 THEFWDRLE-DVRSGMLGI-KGQGRLI---PMSPQTDDDAPGAIWFITAKGTDLAKGVAAGP---QPAQFVVSDDGEGLY   77 (160)
T ss_dssp             HHHHHHHHT-TCCCEEEEE-TTSSCCE---EECCBCCTTSCSCEEEEEETTSHHHHHTSSSC---EEEEEEEEETTTTEE
T ss_pred             HHHHHHHHh-cCCEEEEEe-CCCeeEE---EeeeeEecCCCCEEEEEECCCCHHHHHHHhCC---ceEEEEEECCCCCeE
Confidence            455555555 455566999 9999998   58888777777  9999999999999999999   9 9999444448899


Q ss_pred             EEEEEeeEEcCHHH
Q psy10276        106 VRVEGELEILTQDR  119 (172)
Q Consensus       106 VRIeG~vekl~~ee  119 (172)
                      |+|+|+|+.+++.+
T Consensus        78 v~v~G~a~~v~d~~   91 (160)
T 2qea_A           78 ADLDGTLERSTDRE   91 (160)
T ss_dssp             EEEEEEEEEECCHH
T ss_pred             EEEEEEEEEEcCHH
Confidence            99999999986543

>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}

Probab=99.30  E-value=1.2e-12  Score=100.47  Aligned_cols=99  Identities=13%  Similarity=0.044  Sum_probs=79.2

Q ss_pred             chhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCCCceE
Q psy10276         28 TRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRV  106 (172)
Q Consensus        28 ~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQV  106 (172)
                      +.+....+.+ +++.+-+++. +|.|.+|   .|.+...++++|.|+||..|+|.++|..||   +|+|+ ++|+-.+||
T Consensus        19 ~~~~~~~~l~-~~~~~~LaTv~dG~P~~r---pv~~~~~~~~~l~f~t~~~s~K~~~l~~np---~V~l~-~~~~~~~~v   90 (150)
T 2ig6_A           19 GMKRALEFLK-ECGVFYLATNEGDQPRVR---PFGAVFEYEGKLYIVSNNTKKCFKQMIQNP---KVEIS-GMNKKGQWI   90 (150)
T ss_dssp             HHHHHHHHHH-HHCSEEEEEEETTEEEEE---EECCCEEETTEEEEEEETTSHHHHHHHHCC---EEEEE-EECTTSCEE
T ss_pred             CHHHHHHHHH-hCCeEEEEEccCCceEEE---EeEEEEEcCCEEEEEeCCCcHHHHHHHHCC---CEEEE-EEcCCCeEE
Confidence            3455555554 4666667765 5667776   566665677899999999999999999999   99999 566558999


Q ss_pred             EEEEeeEEcCHH-HHHHHHhhCCCCCcce
Q psy10276        107 RVEGELEILTQD-RFEDLYNREPLYCKIR  134 (172)
Q Consensus       107 RIeG~vekl~~e-esd~YF~sRPr~SQIg  134 (172)
                      +|+|+|+.++++ +.++||..+|..+++.
T Consensus        91 ~i~G~a~~v~d~e~~~~~~~~~p~~~~~~  119 (150)
T 2ig6_A           91 RLTGEVANDDRREVKELALEAVPSLKNMY  119 (150)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHSGGGGGTC
T ss_pred             EEEEEEEEECCHHHHHHHHHhChHHHHhh
Confidence            999999999886 4799999999988765

>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}

Probab=99.18  E-value=3.2e-11  Score=91.85  Aligned_cols=79  Identities=10%  Similarity=-0.097  Sum_probs=58.8

Q ss_pred             cCccccccccC-CCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEcC
Q psy10276         40 PLYCKIRAHLC-HPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEILT  116 (172)
Q Consensus        40 ~~~~ki~a~~g-~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl~  116 (172)
                      ++.+-+++... .|.+|  .|.+.++.+++| |.|+||++|+|+++|+.||   +|+|+ ++|+ ..+||+|+|+++.++
T Consensus        19 ~~~~~LaT~~~d~~~~~--pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np---~v~l~-~~~~~~~~~v~v~G~a~~~~   92 (147)
T 3dmb_A           19 DRTVMLGLDGVEDGHAR--PMTAQIEGDSGGPIWFFTSKDNALIAMLGQGR---RVIGA-FSSKGHDLFASISGSLREDT   92 (147)
T ss_dssp             HCEEEEEETTSSSCCCE--EEEEECSSSSCCCEEEEECTTCTTHHHHTTCE---EEEEE-EECTTSSEEEEEEEEEEECC
T ss_pred             CCEEEEEEEcCCCCceE--eCccccccCCCceEEEEecCCcHHHHHHhhCC---eEEEE-EEcCCCCeEEEEEEEEEEec
Confidence            34445554321 34444  356666666667 9999999999999999999   99999 5565 889999999999997


Q ss_pred             HHH-HHHHH
Q psy10276        117 QDR-FEDLY  124 (172)
Q Consensus       117 ~ee-sd~YF  124 (172)
                      +.+ -+++|
T Consensus        93 d~~~~~~~~  101 (147)
T 3dmb_A           93 DPAVVDRLW  101 (147)
T ss_dssp             CHHHHHHHC
T ss_pred             CHHHHHHHh
Confidence            653 55554

>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}

Probab=99.17  E-value=4e-11  Score=90.21  Aligned_cols=98  Identities=14%  Similarity=0.143  Sum_probs=76.3

Q ss_pred             chhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC---C
Q psy10276         28 TRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM---A  102 (172)
Q Consensus        28 ~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~---l  102 (172)
                      +.+...++.+ +++.+-+++.  +|.|.+|   .+.+...++++|.|+|+..|+|.++|.+||   +|||+ ++++   .
T Consensus         3 ~~~~~~~~l~-~~~~~~LaTv~~dG~P~~~---p~~~~~~~~~~l~f~t~~~s~k~~~l~~np---~V~l~-~~~~~~~~   74 (150)
T 2hhz_A            3 ELKDIMHILE-DMKVGVFATLDEYGNPHAR---HAHITAANEEGIFFMTSPETHFYDQLMGDQ---RVAMT-AISEEGYL   74 (150)
T ss_dssp             CHHHHHHHHH-HTCEEEEEEECTTCCEEEE---EEEEEEEETTEEEEEECTTSHHHHHHHHCC---EEEEE-EEECSTTC
T ss_pred             CHHHHHHHHh-cCCeEEEEEECCCCCEEEE---EEEEEEEcCCEEEEEecCCCHHHHHHhhCC---eEEEE-EEcCCcce
Confidence            4555666663 4556777765  4778777   455544456789999999999999999999   99999 5554   2


Q ss_pred             CceEEEEEeeEEcCHHHHHHHHhhCCCCCcc
Q psy10276        103 SKRVRVEGELEILTQDRFEDLYNREPLYCKI  133 (172)
Q Consensus       103 ~RQVRIeG~vekl~~eesd~YF~sRPr~SQI  133 (172)
                      .+||+|+|+|+.+++++.+++|+.+|...++
T Consensus        75 ~~~v~i~G~a~~v~d~~~~~~~~~~p~~~~~  105 (150)
T 2hhz_A           75 IQVVRVEGTARPVENDYLKTVFADNPYYQHI  105 (150)
T ss_dssp             CEEEEEEEEEEEECHHHHHHHHTTCGGGGGG
T ss_pred             eEEEEEEEEEEECCcHHHHHHHHhChhhhhc
Confidence            4999999999999999999999888875543

>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*

Probab=98.95  E-value=7.6e-10  Score=88.62  Aligned_cols=101  Identities=11%  Similarity=-0.020  Sum_probs=65.6

Q ss_pred             eeeeecc-ceec--chhhHhhhhhcccCccccccccC-CCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccc
Q psy10276         17 NVRVEGE-LEIL--TRDRFEDLYNREPLYCKIRAHLC-HPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKI   91 (172)
Q Consensus        17 ~vrveg~-~e~~--~~~~~~~~~~~~~~~~ki~a~~g-~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~   91 (172)
                      --|-||+ |-.-  -.+....+.+. ++.+-+++... .|.+|  .|.++++.+++| |.|+||..|+|.++|+.||   
T Consensus        13 ~~~~~~~~m~~~~el~e~i~~~L~~-~~~~~LaTv~~dgp~~r--pm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np---   86 (182)
T 3u35_A           13 TTRMSGIEMADTKELQEKFWKALKS-DRTVMLGLDGVEDGHAR--PMTAQIEGDSGGPIWFFTSKDNALIAMLGQGR---   86 (182)
T ss_dssp             -----------CHHHHHHHHHHHHH-HCEEEECCTTSGGGCCE--EEECBCSSSSCSCEEEEEETTCGGGGGCTTCE---
T ss_pred             hhhhhHHhccChHHHHHHHHHHHcc-CCEEEEEEecCCCCcEE--EEEEEEeecCCCEEEEEECCCCHHHHHHHHCC---
Confidence            3456777 4221  13444455543 44555555432 24444  367777666667 9999999999999999999   


Q ss_pred             cceeeccCCC-CCceEEEEEeeEEcCHHH-HHHHH
Q psy10276         92 RAHLCHPFWM-ASKRVRVEGELEILTQDR-FEDLY  124 (172)
Q Consensus        92 ~AAL~F~~w~-l~RQVRIeG~vekl~~ee-sd~YF  124 (172)
                      +|+|| +.|+ ..+||+|+|+|+.+++.+ .+++|
T Consensus        87 ~v~l~-~~~~~~~~~V~v~G~a~vv~D~e~~~~lw  120 (182)
T 3u35_A           87 RVIGA-FSSKGHDLFASISGSLREDTDPAMVDRLW  120 (182)
T ss_dssp             EEEEE-EECTTSSEEEEEEEEEEECCCHHHHHHHC
T ss_pred             cEEEE-EECCCCCeEEEEEEEEEEEcCHHHHHHHH
Confidence            99999 5555 889999999999998764 56665

>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1

Probab=98.92  E-value=2e-10  Score=95.64  Aligned_cols=49  Identities=35%  Similarity=0.516  Sum_probs=46.6

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +++|+|+|+    ||||+|.+|+++.+.++.||.+||++|+||||.++||..+
T Consensus       105 ~val~f~~~~~~rqVrI~G~ae~v~~~~~~~yf~~rp~~s~i~awas~qs~~i  157 (228)
T 1ci0_A          105 NAAIVFFWKDLQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVI  157 (228)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEE
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEcCchhhHHHHHhCCHHHhhceeeCCCCccc
Confidence            689999995    9999999999999999999999999999999999999984

>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}

Probab=98.91  E-value=1.2e-09  Score=83.65  Aligned_cols=78  Identities=14%  Similarity=-0.142  Sum_probs=62.0

Q ss_pred             HhhhhhcccCccccccc--c-CCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCCCceEEE
Q psy10276         32 FEDLYNREPLYCKIRAH--L-CHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRV  108 (172)
Q Consensus        32 ~~~~~~~~~~~~ki~a~--~-g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRI  108 (172)
                      ...+.+ +++.+-+++.  + |.|.++   .|.++ +++++|.|+|+..|+|.++|..||   +|||+ +.|. .++|+|
T Consensus        17 ~~~~L~-~~~~~~LaT~~~d~G~P~~~---pv~~~-~d~~~l~f~t~~~s~K~~~l~~np---~Vsl~-v~~~-~~~v~v   86 (155)
T 2iab_A           17 TLNRLE-LDVDAWVSTAGADGGAPYLV---PLSYL-WDGETFLVATPAASPTGRNLSETG---RVRLG-IGPT-RDLVLV   86 (155)
T ss_dssp             HHHHHH-HCCEEEEEEECTTSSCEEEE---EEECE-ECSSCEEEEEETTSHHHHHHHHHC---EEEEE-ESST-TCEEEE
T ss_pred             HHHHHh-CCCeEEEEEecCCCCCceEE---EEEEE-EECCEEEEEECCCCHHHHHHhhCC---cEEEE-EEcC-CCEEEE
Confidence            344444 4556667765  4 678777   56666 688899999999999999999999   99999 5555 599999


Q ss_pred             EEeeEEcCHHH
Q psy10276        109 EGELEILTQDR  119 (172)
Q Consensus       109 eG~vekl~~ee  119 (172)
                      +|+|+.+++++
T Consensus        87 ~G~a~~v~d~~   97 (155)
T 2iab_A           87 EGTALPLEPAG   97 (155)
T ss_dssp             EEEEEEECGGG
T ss_pred             EEEEEEecCch
Confidence            99999998654

>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}

Probab=98.85  E-value=2.8e-09  Score=77.89  Aligned_cols=82  Identities=11%  Similarity=0.053  Sum_probs=63.1

Q ss_pred             hhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeec--CCceEEEecCCCchhhccccccccccceeeccCCC-CC
Q psy10276         29 RDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRV--EGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-AS  103 (172)
Q Consensus        29 ~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~d--e~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~  103 (172)
                      ++....+.+ +++.+-+++.  +|.|.+|   .|.+...+  ++.+.|+|+..|+|.++|.+||   +|+|+ ++|+ ..
T Consensus         8 ~~~~~~~l~-~~~~~~LaT~~~dG~P~~~---pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np---~v~l~-~~~~~~~   79 (134)
T 2re7_A            8 IDKIQAVIK-DVKFAMISTSNKKGDIHAW---PMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDA---RIGLT-YATQDEK   79 (134)
T ss_dssp             HHHHHHHHH-HCSCEEEEEECTTSCEEEE---EECCSEEETTTTEEEEEEETTSHHHHHHHHCC---EEEEE-EECTTSS
T ss_pred             HHHHHHHHh-cCCEEEEEEEcCCCCEEEE---ecEeeeecCCCceEEEEECCCCHHHHHHhhCC---cEEEE-EEcCCCC
Confidence            455555554 4566667764  5777776   56666555  5669999999999999999999   99999 5555 78


Q ss_pred             ceEEEEEeeEEcCHH
Q psy10276        104 KRVRVEGELEILTQD  118 (172)
Q Consensus       104 RQVRIeG~vekl~~e  118 (172)
                      +||+|+|+|+.+++.
T Consensus        80 ~~v~v~G~a~~~~d~   94 (134)
T 2re7_A           80 NYVSISGDAELPTDK   94 (134)
T ss_dssp             CEEEEEEEEECCCCH
T ss_pred             eEEEEEEEEEEECCH
Confidence            999999999988653

>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=98.82  E-value=6.8e-10  Score=93.90  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=46.6

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|+|+|+|+    ||||+|..|+++.+.++.||.+||++|+||||.++||..+
T Consensus       127 ~vaL~f~~~~~~rqVrI~G~ae~v~~~es~~yf~srp~~sqi~awas~QS~~i  179 (246)
T 2a2j_A          127 YASATFPWYQLGRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPV  179 (246)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCC
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEeccHhHHHHHHhCCHhhhceEEeCCCCccc
Confidence            689999995    9999999999999999999999999999999999999884

>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1

Probab=98.79  E-value=4.3e-09  Score=78.28  Aligned_cols=87  Identities=11%  Similarity=0.046  Sum_probs=63.3

Q ss_pred             hHhhhhhcccCccccccc--cCCCCceeeEEEEe-eeec-CCceEEEecCCCchhhccccccccccceeeccCCCCCceE
Q psy10276         31 RFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFL-HVRV-EGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRV  106 (172)
Q Consensus        31 ~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLL-K~~d-e~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQV  106 (172)
                      ....+. .+++.+-+++.  +|.|.++   .|.+ ...+ ++.+.|+|+..|+|.++|.+||   +|||+|.+....+||
T Consensus        14 ~~~~~l-~~~~~~~LaT~~~dG~P~~~---pv~~~~~~~~~~~l~f~t~~~s~k~~~l~~np---~v~l~~~~~~~~~~v   86 (148)
T 2i02_A           14 KLHELI-KNIDYGMFTTVDDDGSLHSY---PMSKSGDINSEATLWFFTYAGSHKVTEIEHHE---QVNVSFSSPEQQRYV   86 (148)
T ss_dssp             HHHHHH-TTCCEEEEEEECTTSCEEEE---EEECBCC---CCEEEEEEETTSHHHHHHHHCC---EEEEEEEETTTTEEE
T ss_pred             HHHHHH-hcCCEEEEEEEcCCCCEEEE---EeEeeEEEcCCCeEEEEEcCCCHHHHHHHhCC---cEEEEEEcCCCCeEE
Confidence            344444 35666777764  5777777   4666 5555 4459999999999999999999   999994443478999


Q ss_pred             EEEEeeEEcCHHHH-HHHH
Q psy10276        107 RVEGELEILTQDRF-EDLY  124 (172)
Q Consensus       107 RIeG~vekl~~ees-d~YF  124 (172)
                      +|+|+++.+++++. ++.|
T Consensus        87 ~v~G~a~~v~d~~~~~~~~  105 (148)
T 2i02_A           87 SISGTSQLVKDRNKMRELW  105 (148)
T ss_dssp             EEEEEEEEECCHHHHHHHC
T ss_pred             EEEEEEEEEcCHHHHHHHH
Confidence            99999999977554 4544

>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1

Probab=98.68  E-value=1.8e-08  Score=76.63  Aligned_cols=75  Identities=11%  Similarity=0.007  Sum_probs=58.7

Q ss_pred             cccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-------CCceEEE
Q psy10276         38 REPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-------ASKRVRV  108 (172)
Q Consensus        38 ~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-------l~RQVRI  108 (172)
                      .+++.+-+++.  +|.|.++   .|.+...+++++.|+|+..|+|+++|..||   +|||+|.+..       ..++|+|
T Consensus        28 ~~~~~~~LaTv~~dG~P~~~---~v~~~~~~~g~~~f~t~~~s~k~~nl~~np---~vsl~v~~~~~~~~~~~~~~~v~i  101 (157)
T 1vl7_A           28 QEFQSAIISTISEQGIPNGS---YAPFVIDDAKNIYIYVSGLAVHTKNIEANP---LVNVLFVDDEAKTNQIFARRRLSF  101 (157)
T ss_dssp             TTCSEEEEEEECTTSCEEEE---EEEEEECTTCCEEEEECTTSHHHHHHHHCC---EEEEEEECCGGGCSSGGGCCEEEE
T ss_pred             HhCCEEEEEEECCCCCEEEE---EEEEEEcCCCCEEEEEeCccHHHHHHHhCC---cEEEEEEcCccccCCcccCceEEE
Confidence            35556666654  5778777   466665455889999999999999999999   9999965432       1689999


Q ss_pred             EEeeEEcCHH
Q psy10276        109 EGELEILTQD  118 (172)
Q Consensus       109 eG~vekl~~e  118 (172)
                      +|+|+.++++
T Consensus       102 ~G~a~~v~~~  111 (157)
T 1vl7_A          102 DCTATLIERE  111 (157)
T ss_dssp             EEEEEEECTT
T ss_pred             EEEEEEcCCC
Confidence            9999999975

>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0

Probab=98.66  E-value=2.7e-08  Score=73.75  Aligned_cols=88  Identities=14%  Similarity=0.116  Sum_probs=66.1

Q ss_pred             hhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCC---CCCce
Q psy10276         30 DRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFW---MASKR  105 (172)
Q Consensus        30 ~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w---~l~RQ  105 (172)
                      +....+.+. .+.+-+++. +|.|.+|   .|.... +++.+.|+|+..|+|.++|..||   +|+|++.|.   ...++
T Consensus         6 ~~~~~~L~~-~~~~~LaT~~dg~P~~~---pv~~~~-~~~~l~f~t~~~s~k~~~l~~np---~v~l~v~~~~d~~~~~~   77 (139)
T 3ec6_A            6 EKITTIIQG-QRTGVLSTVRNDKPHSA---FMMFFH-EDFVLYVATDRQSKKITDIENNP---NVHVLLGREGKKLDEDY   77 (139)
T ss_dssp             HHHHHHHHS-CCEEEEEEEETTEEEEE---EEECEE-ETTEEEEEEETTCHHHHHHHHCC---EEEEEECC---CTTCCE
T ss_pred             HHHHHHHhc-CCEEEEEEecCCCEEEE---EEEEEE-eCCEEEEEECCCCHHHHHHHhCC---cEEEEEEecCCCCCccE
Confidence            445555543 444555554 4667776   344443 77899999999999999999999   999996455   25799


Q ss_pred             EEEEEeeEEcC-HHHHHHHHh
Q psy10276        106 VRVEGELEILT-QDRFEDLYN  125 (172)
Q Consensus       106 VRIeG~vekl~-~eesd~YF~  125 (172)
                      |+|+|+++.++ +++.+++|+
T Consensus        78 v~v~G~a~~~~d~~~~~~~~~   98 (139)
T 3ec6_A           78 IEVEGLASIEEDSTLKNKFWN   98 (139)
T ss_dssp             EEEEEEEEEECCHHHHHHHCC
T ss_pred             EEEEEEEEEEcCHHHHHHHHH
Confidence            99999999996 577788885

>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*

Probab=98.60  E-value=8.2e-09  Score=83.24  Aligned_cols=49  Identities=29%  Similarity=0.371  Sum_probs=46.2

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +++|+|+|+    ||||+|..|+++.+.++.||+++|++|+||||.++||..+
T Consensus        79 ~v~l~f~~~~~~~qvri~G~a~~v~d~~~~~~w~~~p~~s~~~aw~s~qs~~i  131 (199)
T 1dnl_A           79 RVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRI  131 (199)
T ss_dssp             EEEEEECCGGGTEEEEEEEEEEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCC
T ss_pred             eEEEEEEcCCCCEEEEEEEEEEEeCCccHHHHHHhCChhhhcccccCCCCccc
Confidence            578999995    9999999999999999999999999999999999999884

>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}

Probab=98.60  E-value=2.4e-08  Score=75.46  Aligned_cols=92  Identities=16%  Similarity=0.093  Sum_probs=70.3

Q ss_pred             eecchhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCC
Q psy10276         25 EILTRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMA  102 (172)
Q Consensus        25 e~~~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l  102 (172)
                      ..++.+ ...+.+. + .+-+++.  +|.|.++.  +..++..|++.+.|.|+..++|.++|.+||   +|+|+|.++..
T Consensus        26 ~~l~~~-~~~~l~~-~-~~~LATv~~dG~P~~~p--~~f~~~~d~~~l~f~~~~~~~k~~nL~~np---~V~l~~~~~~~   97 (140)
T 2htd_A           26 NKLTEE-QVNLFKN-N-LVYLATVDADGNPQVGP--KGSMTVLDPSHLQYLEKTKGEAYENIKRGS---KVALVAADVPS   97 (140)
T ss_dssp             SCCCHH-HHHHHHH-S-CEEEEEECTTCCEEEEE--ETTCEEEETTEEEEEESSCCHHHHHHHTTC---CEEEEEEETTT
T ss_pred             ccCCHH-HHHHHhC-C-CEEEEEECCCCCEEEec--ceeEEecCCCEEEEeccCCchHHHHhhcCC---eEEEEEEecCC
Confidence            456644 5567777 5 6778875  57787763  344455678899999999999999999999   99999555557


Q ss_pred             CceEEEEEeeEEcCHHHHHHHH
Q psy10276        103 SKRVRVEGELEILTQDRFEDLY  124 (172)
Q Consensus       103 ~RQVRIeG~vekl~~eesd~YF  124 (172)
                      .+++||.|+++.+++++--+-+
T Consensus        98 ~~~v~i~G~a~~v~d~~~~~~l  119 (140)
T 2htd_A           98 HTAVRVLATAEVHEDDDYAKKV  119 (140)
T ss_dssp             TEEEEEEEEEEEESSSHHHHHH
T ss_pred             CCEEEEEEEEEEecChHHHHHH
Confidence            8999999999998876543333

>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*

Probab=98.60  E-value=1.2e-08  Score=84.17  Aligned_cols=48  Identities=15%  Similarity=0.346  Sum_probs=45.7

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCce
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSR   55 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsR   55 (172)
                      +++|+|+|+    ||||+|..|.++++.++.||+.||++|+||||.+++|..
T Consensus       104 ~val~f~~~~~~rqvrI~G~ae~v~~~~~~~~w~~rp~~s~i~A~as~qs~~  155 (222)
T 1ty9_A          104 WASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEE  155 (222)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHTSCGGGHHHHHHCCTTSB
T ss_pred             eEEEEEEcCCCCeEEEEEEEEEEEccHHhHHHHHhCccccccceeeccCCCc
Confidence            688999995    999999999999999999999999999999999999986

>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}

Probab=98.59  E-value=1e-07  Score=69.23  Aligned_cols=91  Identities=8%  Similarity=0.034  Sum_probs=64.7

Q ss_pred             chhhHhhhhhcccCcccccc-ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCce
Q psy10276         28 TRDRFEDLYNREPLYCKIRA-HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKR  105 (172)
Q Consensus        28 ~~~~~~~~~~~~~~~~ki~a-~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQ  105 (172)
                      .++....+.+. .+.+-+++ .+|.|.++   .|.... +++.+.|+|+..|+|.++|..||   +|||++.+.+ ..++
T Consensus         6 ~~~~~~~~l~~-~~~~~LaT~~~g~P~~~---pv~~~~-~~~~l~f~t~~~s~k~~~l~~np---~v~l~v~~~~~~~~~   77 (128)
T 3db0_A            6 LEDKILAILEQ-HQVGVLTSVQGDFPHAR---YMTFLH-DGLTLYTPSGKELPKTEEVRRNP---HVCVLIGYDSPGSAF   77 (128)
T ss_dssp             HHHHHHHHHHT-CCEEEEEEEETTEEEEE---EEECEE-ETTEEEEEC----CTTCCCCCCC---EEEEEECCCSTTCCE
T ss_pred             HHHHHHHHHhh-CCEEEEEEecCCCEEEE---EEEEEe-cCCEEEEEECCCCHHHHHHHhCC---ceEEEEEEcCCCCcE
Confidence            55666677654 44555665 35667666   344443 77889999999999999999999   9999954423 7789


Q ss_pred             EEEEEeeEEcC-HHHHHHHHhh
Q psy10276        106 VRVEGELEILT-QDRFEDLYNR  126 (172)
Q Consensus       106 VRIeG~vekl~-~eesd~YF~s  126 (172)
                      |+|.|+++.++ +++.+++|+.
T Consensus        78 v~v~G~a~~v~d~~~~~~~~~~   99 (128)
T 3db0_A           78 LEINGLASLEEDESIKERIWEN   99 (128)
T ss_dssp             EEEEEEEEECCCHHHHHHHHHH
T ss_pred             EEEEEEEEEEcCHHHHHHHHHH
Confidence            99999999994 6778888853

>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*

Probab=98.57  E-value=1e-08  Score=87.12  Aligned_cols=49  Identities=33%  Similarity=0.590  Sum_probs=46.3

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +++|+|+|+    ||||+|..|+++.+.++.||++||++|+||||.++||..+
T Consensus       126 ~vaL~f~~~~~~rqVrI~G~ae~v~d~e~~~~w~srp~~s~i~awas~Qs~~i  178 (261)
T 1nrg_A          126 FASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVI  178 (261)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTSCC
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEecCcchHHHHhcCChhhhhhhhcCCCCCcc
Confidence            589999995    9999999999999999999999999999999999999874

>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1

Probab=98.45  E-value=2e-07  Score=68.49  Aligned_cols=84  Identities=10%  Similarity=-0.044  Sum_probs=62.0

Q ss_pred             hhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeec-CCceEEEecCCCchhhccccccccccceeeccCCCCCce
Q psy10276         29 RDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRV-EGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKR  105 (172)
Q Consensus        29 ~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~d-e~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQ  105 (172)
                      ++....+.+. ++.+-+++.  +|.|.++   .|.+...+ ++.|.|+|+..|+|.++|.+||   +|+|+|......++
T Consensus         8 ~~~~~~~l~~-~~~~~LaT~~~~G~P~~~---pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np---~v~l~~~~~~~~~~   80 (146)
T 2hq7_A            8 LIESNELVES-SKIVMVGTNGENGYPNIK---AMMRLKHDGLKKFWLSTNTSTRMVERLKKNN---KICLYFVDDNKFAG   80 (146)
T ss_dssp             HHHHHHHHHH-CSEEEEEEECGGGCEEEE---EEEEEEEETTTEEEEEEECCHHHHHHHHHCC---EEEEEEECSSSSEE
T ss_pred             HHHHHHHHhc-CCEEEEEEECCCCCEEEE---EEEEEEEcCCCEEEEEecCCCHHHHHHhhCC---eEEEEEECCCCceE
Confidence            4555555554 445567765  4678776   44554434 3669999999999999999999   99999443337799


Q ss_pred             EEEEEeeEEcCHHH
Q psy10276        106 VRVEGELEILTQDR  119 (172)
Q Consensus       106 VRIeG~vekl~~ee  119 (172)
                      |+|.|+++.+++++
T Consensus        81 v~v~G~a~~v~d~~   94 (146)
T 2hq7_A           81 LMLVGTIEILHDRA   94 (146)
T ss_dssp             EEEEEEEEEECCHH
T ss_pred             EEEEEEEEEEcCHH
Confidence            99999999997653

>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}

Probab=98.24  E-value=1.5e-06  Score=67.85  Aligned_cols=77  Identities=10%  Similarity=-0.021  Sum_probs=60.3

Q ss_pred             ccCCCCceeeEEEEee--eecCCceEEEecCCCchhhccccccccccceeeccCCCC---CceEEEE-EeeEEcC---HH
Q psy10276         48 HLCHPSSRLFRFLFLH--VRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMA---SKRVRVE-GELEILT---QD  118 (172)
Q Consensus        48 ~~g~PSsRi~R~VLLK--~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l---~RQVRIe-G~vekl~---~e  118 (172)
                      .+|.|.+|+   |-+-  ..+++.|-|.|+.+|.|.++|.+||   ++|+|..-...   ..|||++ |.|+..+   .+
T Consensus        23 ~~g~P~vR~---v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np---~V~i~~~~~d~~~~~~~IRi~~G~a~~~~~~~~~   96 (145)
T 3ba3_A           23 VNNEADVKI---VNFVWYEAQPDTLYFSSVKTSPALKVYDQNP---DIAFITIPNDGTAGNPYLRAQHVKLQRSTKTMTD   96 (145)
T ss_dssp             ETTEEEEEE---EECEECTTSTTEEEEEEETTCTHHHHHTTCC---EEEEEEEECTTCTTCCEEEEEEEEEEECSCCHHH
T ss_pred             CCCCEEEEE---EEEEEEecCCCEEEEEECCCCHHHHHHHhCC---CEEEEEECCCCCccceEEEEEeEEEEEcCCchHH
Confidence            366777774   4444  2457889999999999999999999   99998333333   5899999 9999998   47


Q ss_pred             HHHHHHhhCCCC
Q psy10276        119 RFEDLYNREPLY  130 (172)
Q Consensus       119 esd~YF~sRPr~  130 (172)
                      -.+.+|+.-|..
T Consensus        97 ~k~~~~e~~P~~  108 (145)
T 3ba3_A           97 LLPQYLETVPNY  108 (145)
T ss_dssp             HHHHHHHHSTTH
T ss_pred             HHHHHHHhChhh
Confidence            778888877743

>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1

Probab=98.18  E-value=1.8e-06  Score=63.03  Aligned_cols=88  Identities=14%  Similarity=0.109  Sum_probs=63.3

Q ss_pred             chhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecC-CceEEEecCCCchhhccccccccccceeeccCCCCCc
Q psy10276         28 TRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVE-GELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASK  104 (172)
Q Consensus        28 ~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de-~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~R  104 (172)
                      .++...++.+.. +.+-+++.  +|.|.++.   |.....++ +.+.|+|+..|+|.++|.+||   +|+|+| .++ .+
T Consensus         9 ~~~~~~~~l~~~-~~~~LaT~~~~G~P~~~p---v~~~~~~~~~~l~f~t~~~s~k~~~l~~np---~v~l~~-~~~-~~   79 (141)
T 2fhq_A            9 MKEKAVELLQKC-EVVTLASVNKEGYPRPVP---MSKIAAEGISTIWMSTGADSLKTIDFLSNP---KAGLCF-QEK-GD   79 (141)
T ss_dssp             HHHHHHHHHHTC-SEEEEEEECTTSCEEEEE---EECCEEETTTEEEEEEETTSHHHHHHHHCC---EEEEEE-EET-TE
T ss_pred             HHHHHHHHHhcC-CEEEEEEECCCCCEEEEe---eEEEEeCCCCeEEEEeCCCCHHHHHHHhCC---cEEEEE-EeC-CC
Confidence            356666666654 44556654  57777773   44333343 689999999999999999999   999994 443 37


Q ss_pred             eEEEEEeeEEcCHH-HHHHHH
Q psy10276        105 RVRVEGELEILTQD-RFEDLY  124 (172)
Q Consensus       105 QVRIeG~vekl~~e-esd~YF  124 (172)
                      +|+|.|+++.++++ +-++.+
T Consensus        80 ~v~v~G~a~~v~d~~~~~~~~  100 (141)
T 2fhq_A           80 SVALMGEVEVVTDEKLKQELW  100 (141)
T ss_dssp             EEEEEEEEEEECCHHHHHHSC
T ss_pred             EEEEEEEEEEECCHHHHHHHH
Confidence            99999999999874 445544

>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}

Probab=98.15  E-value=1.1e-06  Score=64.34  Aligned_cols=79  Identities=15%  Similarity=0.151  Sum_probs=58.9

Q ss_pred             HhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEE
Q psy10276         32 FEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRV  108 (172)
Q Consensus        32 ~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRI  108 (172)
                      ...+.+ +++.+-+++.  +|.|..+-   |... +|++.|.|.|+..|+|.++|..||   +|+|++..-. ..++|+|
T Consensus         8 ~~~~l~-~~~~~~LaT~~~dG~P~~~p---v~~~-~d~~~l~f~t~~~s~k~~~l~~np---~v~l~v~~~~~~~~~v~v   79 (131)
T 3f7e_A            8 YESLLE-RPLYGHLATVRPDGTPQVNA---MWFA-WDGEVLRFTHTTKRQKYRNIKANP---AVAMSVIDPDNPYRYLEV   79 (131)
T ss_dssp             CHHHHH-SCCCEEEEEECTTSCEEEEE---ECCE-ECSSCEEEEEETTSHHHHHHHHCC---EEEEEEECSSCTTCEEEE
T ss_pred             HHHHHh-CCCcEEEEEECCCCCEEEEE---EEEE-EECCEEEEEECCCCHHHHHHhhCC---cEEEEEEcCCCCeeEEEE
Confidence            334444 4566777764  67788773   2222 577889999999999999999999   9999944332 3589999


Q ss_pred             EEeeEEcCHH
Q psy10276        109 EGELEILTQD  118 (172)
Q Consensus       109 eG~vekl~~e  118 (172)
                      +|+++.|+++
T Consensus        80 ~G~a~~v~~~   89 (131)
T 3f7e_A           80 RGLVEDIVPD   89 (131)
T ss_dssp             EEEEEEEEEC
T ss_pred             EEEEEEeccC
Confidence            9999988753

>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=97.96  E-value=6e-06  Score=60.88  Aligned_cols=80  Identities=11%  Similarity=-0.008  Sum_probs=59.8

Q ss_pred             hhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecC--CceEEEecCCCchhhccccccccccceeeccCCCCCc
Q psy10276         29 RDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVE--GELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASK  104 (172)
Q Consensus        29 ~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de--~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~R  104 (172)
                      .+....+.+ +.+.+-+++.  +|.|.++-   |... +++  +.+.|.|+..|+|.++|..||   +++|+ ++++ .+
T Consensus        11 ~~~~~~~L~-~~~~~~LaT~~~dG~P~~~p---v~~~-~~~~~~~l~f~t~~~s~k~~~l~~np---~V~l~-~~~~-~~   80 (137)
T 2asf_A           11 SDDALAFLS-ERHLAMLTTLRADNSPHVVA---VGFT-FDPKTHIARVITTGGSQKAVNADRSG---LAVLS-QVDG-AR   80 (137)
T ss_dssp             CHHHHHHTT-SSCCEEEEEECTTSCEEEEE---ECCE-EETTTTEEEEEEETTCHHHHHHHHHC---EEEEE-EEET-TE
T ss_pred             cHHHHHHHh-CCCeEEEEEECCCCCEEEEE---EEEE-EECCCCEEEEEeCCCCHHHHHHhhCC---eEEEE-EECC-CC
Confidence            345555555 4667777765  57888874   3332 333  579999999999999999999   99999 4443 58


Q ss_pred             eEEEEEeeEEcCHH
Q psy10276        105 RVRVEGELEILTQD  118 (172)
Q Consensus       105 QVRIeG~vekl~~e  118 (172)
                      .|+|+|+++.+++.
T Consensus        81 ~v~v~G~a~~~~d~   94 (137)
T 2asf_A           81 WLSLEGRAAVNSDI   94 (137)
T ss_dssp             EEEEEEEEEEECCH
T ss_pred             EEEEEEEEEEecCH
Confidence            99999999999753

>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1

Probab=97.83  E-value=1.9e-05  Score=58.91  Aligned_cols=85  Identities=15%  Similarity=0.191  Sum_probs=62.2

Q ss_pred             cchhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccC---CC
Q psy10276         27 LTRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPF---WM  101 (172)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~---w~  101 (172)
                      +|.+....+.+..+- +-+++.  +|.|.++.   |-.. ++++.+.|+|+..++|.++|.+||   +|+++|.-   |.
T Consensus        10 ~~~~~~~~~l~~~~~-~~LaT~~~~G~P~~~p---v~~~-~~~~~l~~~t~~~~~k~~~l~~np---~v~l~~~~~~~~~   81 (162)
T 1rfe_A           10 MSEAEIADFVNSSRT-GTLATIGPDGQPHLTA---MWYA-VIDGEIWLETKAKSQKAVNLRRDP---RVSFLLEDGDTYD   81 (162)
T ss_dssp             CCHHHHHHHHHHCCC-EEEEEECTTSCEEEEE---ECCE-EETTEEEEEEETTSHHHHHHHHCC---EEEEEEEECSSGG
T ss_pred             CCHHHHHHHHhcCcE-EEEEEECCCCCEEEEE---EEEE-EECCEEEEEecCccHHHHHHhhCC---eEEEEEEcCCCcc
Confidence            566777788876554 445554  56777773   2222 466789999999999999999999   99999531   11


Q ss_pred             CCceEEEEEeeEEcCHHH
Q psy10276        102 ASKRVRVEGELEILTQDR  119 (172)
Q Consensus       102 l~RQVRIeG~vekl~~ee  119 (172)
                      -.+.|+|.|+++.+++++
T Consensus        82 ~~~~v~~~G~a~~v~d~~   99 (162)
T 1rfe_A           82 TLRGVSFEGVAEIVEEPE   99 (162)
T ss_dssp             GCEEEEEEEEEEEECCHH
T ss_pred             cccEEEEEEEEEEeCChH
Confidence            126899999999998653

>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}

Probab=97.80  E-value=7.9e-06  Score=64.52  Aligned_cols=45  Identities=18%  Similarity=0.327  Sum_probs=39.4

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccC-CCCce
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLC-HPSSR   55 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g-~PSsR   55 (172)
                      +++|+|+|+    ||||+|..|+++.+  +.||+.+|++++++ |.+ .|+..
T Consensus        78 ~v~l~f~~~~~~~qvri~G~a~~~~d~--~~~w~~~~~~~~~~-~~~~~~~~~  127 (175)
T 2ou5_A           78 RVAIHIWIPKASLQVRAKAIAKILPGD--PNLFAQLPEAARMN-YQGPVPGTP  127 (175)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEEEECC--HHHHHHSCHHHHGG-GSSSCTTCB
T ss_pred             cEEEEEEeCCCCEEEEEEEEEEEeCcH--HHHHHHCCHhHHhc-ccCCCCCCc
Confidence            578999996    99999999999998  99999999999999 665 36664

>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*

Probab=97.61  E-value=7.9e-05  Score=54.56  Aligned_cols=84  Identities=10%  Similarity=-0.051  Sum_probs=59.1

Q ss_pred             cchhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCC--ceEEEecCCCchhhccccccccccceeeccCCCC
Q psy10276         27 LTRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEG--ELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMA  102 (172)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~--Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l  102 (172)
                      ++.+....+.+. .+.+-+++.  +|.|.++-   |.+. ++++  -+.|.|+..++|.++|.+||   +|+|+|.--.-
T Consensus         5 ~~~~~~~~~l~~-~~~~~LaT~~~~G~P~~~p---v~~~-~~~~~~~l~~~t~~~~~k~~~l~~np---~v~l~~~~~~~   76 (147)
T 2aq6_A            5 VFDDKLLAVISG-NSIGVLATIKHDGRPQLSN---VQYH-FDPRKLLIQVSIAEPRAKTRNLRRDP---RASILVDADDG   76 (147)
T ss_dssp             CHHHHHHHHHHT-CSEEEEEEECTTSCEEEEE---EECE-EETTTTEEEEEEETTSHHHHHHHHCC---EEEEEEECTTS
T ss_pred             cChHHHHHHHhc-CCeEEEEEECCCCCEEEEE---EEEE-EcCCCCEEEEEecCCCHHHHHHhhCC---cEEEEEEcCCC
Confidence            445666666654 445556654  57777773   3332 3444  47799999999999999999   99999543123


Q ss_pred             CceEEEEEeeEEcCHH
Q psy10276        103 SKRVRVEGELEILTQD  118 (172)
Q Consensus       103 ~RQVRIeG~vekl~~e  118 (172)
                      .++|+|.|+++.++++
T Consensus        77 ~~~v~v~G~a~~~~d~   92 (147)
T 2aq6_A           77 WSYAVAEGTAQLTPPA   92 (147)
T ss_dssp             SCEEEEEEECEECCCC
T ss_pred             cEEEEEEEEEEEcCCC
Confidence            3789999999999873

>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}

Probab=97.58  E-value=1.4e-05  Score=63.93  Aligned_cols=47  Identities=15%  Similarity=0.417  Sum_probs=40.5

Q ss_pred             ehheeccee----eeeeeccceecchhhHh--------hhhhcccCcccc-ccccCCCCce
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFE--------DLYNREPLYCKI-RAHLCHPSSR   55 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~--------~~~~~~~~~~ki-~a~~g~PSsR   55 (172)
                      +++|+|+|+    ||||+|..|+++.+.+.        .||+.+|+++++ ++|.+ |++.
T Consensus        74 ~v~l~f~~~~~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~s-pg~~  133 (195)
T 2i51_A           74 WAEICWYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPY-PGKP  133 (195)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCC-TTSB
T ss_pred             eEEEEEEeCCCCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCC-CCCC
Confidence            578999995    99999999999999885        999999999999 58864 4554

>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}

Probab=97.27  E-value=0.00026  Score=53.88  Aligned_cols=73  Identities=14%  Similarity=0.078  Sum_probs=55.2

Q ss_pred             ccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccC-----CC--CCceEEEE
Q psy10276         39 EPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPF-----WM--ASKRVRVE  109 (172)
Q Consensus        39 ~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~-----w~--l~RQVRIe  109 (172)
                      +.+.+-+++  .+|.|.+..+-++    .|++++.|+|...|+|.++|..||   +|||++.-     +.  ....+.+.
T Consensus        13 ~~~~~~LaT~~~~G~P~~s~v~~~----~~~~~~~~~~s~~~~~~~nl~~~p---rvsl~v~~~~~~~~~~~~~~rltl~   85 (148)
T 3tgv_A           13 ERKTLQLATVDAQGRPNVSYAPFV----QNQEGYFVLISHIARHARNLEVNP---QVSIMMIEDETEAKQLFARKRLTFD   85 (148)
T ss_dssp             HCCEEEEEEECTTCCEEEEEEEEE----EETTEEEEEEETTSHHHHHHHHSC---EEEEEEECCGGGCSCGGGCCEEEEE
T ss_pred             hCCEEEEEEECCCCCEEEEEEEEE----EECCEEEEEECCccHHHHHHHhCC---CeEEEEecCcccccCcccceEEEEe
Confidence            345566665  4678887754444    477899999999999999999999   99998531     22  23569999


Q ss_pred             EeeEEcCHH
Q psy10276        110 GELEILTQD  118 (172)
Q Consensus       110 G~vekl~~e  118 (172)
                      |.++.++++
T Consensus        86 G~a~~v~~~   94 (148)
T 3tgv_A           86 AVASMVERD   94 (148)
T ss_dssp             EEEEEECTT
T ss_pred             eeEEEcCCC
Confidence            999999753

>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}

Probab=97.22  E-value=0.00029  Score=54.28  Aligned_cols=85  Identities=7%  Similarity=-0.073  Sum_probs=60.4

Q ss_pred             ecchhhHhhhhhcccCccccccc--c-CCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCCC
Q psy10276         26 ILTRDRFEDLYNREPLYCKIRAH--L-CHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWMA  102 (172)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ki~a~--~-g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l  102 (172)
                      .|+. ...++.+.. +.+-+++.  + |.|..+-  +-.....|++.+.|.|+..++|.++|..||   +|+|+ ++ .-
T Consensus         9 ~L~~-e~~elL~~~-~~~~LATv~~d~G~P~~sp--~~~~~~~d~~~l~f~~~~~~~k~~nl~~np---~Vsl~-v~-~~   79 (151)
T 2q9k_A            9 RLSE-QQMKALTDL-PLVFLITHDQSKSWPITHA--ISWVYAKDETTIRFAIEADSLLVKTLADHP---VFTLI-FF-AD   79 (151)
T ss_dssp             SCCH-HHHHHTSSC-CCEEEEECCTTSSSCEEEE--ECCEEEEETTEEEEEEETTCTHHHHHHHSC---CEEEE-EE-ET
T ss_pred             HHHH-HHHHHHhcC-CEEEEEEEcCCCCcEeEee--eEEEEEeCCCEEEEEECCCcHHHHHHHhCC---cEEEE-EE-CC
Confidence            3444 455566543 44445543  4 7777663  223334578899999999999999999999   99999 43 33


Q ss_pred             CceEEEEEeeEEcCHHH
Q psy10276        103 SKRVRVEGELEILTQDR  119 (172)
Q Consensus       103 ~RQVRIeG~vekl~~ee  119 (172)
                      ..-++|.|+++.+.+++
T Consensus        80 ~~~~~i~G~A~~v~d~~   96 (151)
T 2q9k_A           80 QSTYSLTCTDVAAWETT   96 (151)
T ss_dssp             TEEEEEEEEEEEEECCS
T ss_pred             CCEEEEEEEEEEEeCcc
Confidence            45699999999888754

>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1

Probab=96.88  E-value=0.0021  Score=51.80  Aligned_cols=92  Identities=16%  Similarity=0.089  Sum_probs=62.0

Q ss_pred             hhHhhhhhcccCccccccc----cCCCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccCCC---
Q psy10276         30 DRFEDLYNREPLYCKIRAH----LCHPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPFWM---  101 (172)
Q Consensus        30 ~~~~~~~~~~~~~~ki~a~----~g~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~---  101 (172)
                      +....+.+.. +..-+++.    +|.|.+..+-++    ++++| +.|+|...++|.++|..||   +++|++.-..   
T Consensus        10 ~~~r~ll~~~-~~~~LaT~~~~~dG~P~~s~v~~~----~d~~g~~~f~~s~~s~k~~nl~~np---rvsl~v~~~~~~~   81 (247)
T 2arz_A           10 KNARELLLKE-YRAVLSTHSKKWPGFPFGSVVPYC----LDAEGRPLILISRIAQHTHNLQADP---RCSMLVGERGAED   81 (247)
T ss_dssp             HHHHHHHHHC-SEEEEEEECSSSTTCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCC---EEEEEEECTTCSS
T ss_pred             HHHHHHHHhC-CEEEEEEcCCCCCCcceEEEEEEE----ECCCCCEEEEEeChhHHHHHHHhCC---CeEEEEecCCCCC
Confidence            3444454433 33344443    577877642233    45555 9999999999999999999   9999953221   


Q ss_pred             --CCceEEEEEeeEEcCHHH----HHHHHhhCCC
Q psy10276        102 --ASKRVRVEGELEILTQDR----FEDLYNREPL  129 (172)
Q Consensus       102 --l~RQVRIeG~vekl~~ee----sd~YF~sRPr  129 (172)
                        ..+.|.|.|+++.+++++    .+.|...-|.
T Consensus        82 ~~~~~~v~l~G~a~~v~d~e~~~~~~~~~~~~P~  115 (247)
T 2arz_A           82 IQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPE  115 (247)
T ss_dssp             TTSSCEEEEEEEEEECCHHHHHHHHHHHHHHCGG
T ss_pred             hhhCceEEEEEEEEECCcHHHHHHHHHHHHHCcC
Confidence              124799999999999753    4556665564

>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A

Probab=96.80  E-value=0.0011  Score=50.34  Aligned_cols=86  Identities=8%  Similarity=0.018  Sum_probs=63.2

Q ss_pred             ceecchhhHhhhhhcccCcccccc-ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccC--C
Q psy10276         24 LEILTRDRFEDLYNREPLYCKIRA-HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPF--W  100 (172)
Q Consensus        24 ~e~~~~~~~~~~~~~~~~~~ki~a-~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~--w  100 (172)
                      +..++++....+.+..+.| .++. .+|.|...-+-+    .++++.+.|.|. .++|..+|..||   +||+++.-  +
T Consensus         7 ~~~l~~~e~~~lL~~~~~~-~Lat~~dg~P~~~Pv~~----~~~~~~ly~~~~-~g~K~~~l~~np---~V~~~v~~~~~   77 (148)
T 3u5w_A            7 ITEMSDYDIREMIQHKHVG-RLGYVVDDRPIIVPMTF----RFSGGSFYSFTT-DGQKTNAMRKND---AICILFDQIES   77 (148)
T ss_dssp             EEECCHHHHHHHHHHCCEE-EEEEEETTEEEEEEEEC----EEETTEEEEEEC-CHHHHHHHHHCC---EEEEEEEEESS
T ss_pred             cccCCHHHHHHHHhcCCEE-EEEEccCCcEEEEEEEE----EEECCEEEEEEC-CchhHHHHhcCC---cEEEEEEecCC
Confidence            4578999999999887654 4444 356666652222    246677888884 799999999999   99999642  2


Q ss_pred             C-CCceEEEEEeeEEcCHH
Q psy10276        101 M-ASKRVRVEGELEILTQD  118 (172)
Q Consensus       101 ~-l~RQVRIeG~vekl~~e  118 (172)
                      . --|.|.|.|+++.++++
T Consensus        78 ~~~y~sV~v~G~a~~v~d~   96 (148)
T 3u5w_A           78 QTKWRTVLVQGRYREIARE   96 (148)
T ss_dssp             SSSEEEEEEEEEEEECCGG
T ss_pred             CCcEEEEEEEEEEEEeCCH
Confidence            2 33689999999999874

>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}

Probab=96.69  E-value=0.0032  Score=46.99  Aligned_cols=97  Identities=9%  Similarity=0.002  Sum_probs=63.8

Q ss_pred             ceecchhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-
Q psy10276         24 LEILTRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-  101 (172)
Q Consensus        24 ~e~~~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-  101 (172)
                      .+.++.+....+.+..+- +.+++. +|.|..+-+-+++-.+-+++-+.|.|. .++|..+|..||   +|+++..-.. 
T Consensus        12 ~~~~~~~e~~~~L~~~~~-~~Lat~~dg~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~K~~~l~~np---~V~~~v~~~~~   86 (148)
T 3cp3_A           12 ITILDSSDSLSRLSSESV-GRLVVHRKDDLDIFPVNFVLDYSAEQPRVYFRTA-EGTKLFSVNLNS---DVLFEVDRFDD   86 (148)
T ss_dssp             EEEECHHHHHHHHHTCSE-EEEEEEETTEEEEEEEEEEEECSSSSCEEEEEEC---CCSSCTTSCS---EEEEEEEECC-
T ss_pred             cccCCHHHHHHHHhcCCE-EEEEEEeCCEEEEEEEEEEEEecCCCCEEEEEcC-CCchHHHHhcCC---cEEEEEEECCC
Confidence            456788888888876554 555543 566777632333211101455778888 999999999999   9999854322 


Q ss_pred             -CCceEEEEEeeEEcCHHH-HHHHHh
Q psy10276        102 -ASKRVRVEGELEILTQDR-FEDLYN  125 (172)
Q Consensus       102 -l~RQVRIeG~vekl~~ee-sd~YF~  125 (172)
                       -.+.|.|.|+++.+++++ -.+.++
T Consensus        87 ~~~~sV~v~G~a~~v~d~~e~~~~l~  112 (148)
T 3cp3_A           87 AEGWSVVLKGNAYVVRDTEEARHADT  112 (148)
T ss_dssp             -CEEEEEEEEEEEECCCHHHHHHHTT
T ss_pred             CCCeEEEEEEEEEEECCHHHHHHHHh
Confidence             345899999999998754 445443

>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1

Probab=96.68  E-value=0.0012  Score=48.96  Aligned_cols=86  Identities=12%  Similarity=-0.003  Sum_probs=61.5

Q ss_pred             eecchhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCC--C
Q psy10276         25 EILTRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFW--M  101 (172)
Q Consensus        25 e~~~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w--~  101 (172)
                      ..++++....+.+..+.+ -+++. +|.|..+-+-++    ++++.+.|.| ..++|.++|..||   +|++++.-.  .
T Consensus         5 ~~~~~~~~~~~L~~~~~~-~Lat~~~g~P~~~pv~~~----~~~~~l~~~t-~~~~k~~~l~~~p---~V~~~v~~~~~~   75 (149)
T 2hq9_A            5 RTLSALECTKVLTANRVG-RLACAKDGQPYVVPLYYA----YSDAHLYAFS-MPGKKIEWMRANP---RVSVQVDEHGQG   75 (149)
T ss_dssp             EECCHHHHHHHHHHCCEE-EEEEEETTEEEEEEEECE----EETTEEEEEE-CSSHHHHHHHHCC---EEEEEEEEECST
T ss_pred             hhcCHHHHHHHHHhCCEE-EEEEccCCeEEEEEEEEE----EECCEEEEEe-CccHHHHHHhcCC---cEEEEEEecCCC
Confidence            457888888888876654 44443 666776632222    4556688888 5899999999999   999995421  1


Q ss_pred             -CCceEEEEEeeEEcCHHH
Q psy10276        102 -ASKRVRVEGELEILTQDR  119 (172)
Q Consensus       102 -l~RQVRIeG~vekl~~ee  119 (172)
                       --+.|.|.|+++.+++++
T Consensus        76 ~~y~sV~v~G~a~~v~d~~   94 (149)
T 2hq9_A           76 RGWKSVVVDGRYEELPDLI   94 (149)
T ss_dssp             TCEEEEEEEEEEEECCSCG
T ss_pred             CcEEEEEEEEEEEEEcCcc
Confidence             236799999999998653

>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1

Probab=96.15  E-value=0.007  Score=47.11  Aligned_cols=77  Identities=12%  Similarity=0.046  Sum_probs=55.1

Q ss_pred             cCCCCceeeEEEEeeee-c-CCceEEEecCCCchhhccccccccccceeeccCCC------------C--CceEEEEEee
Q psy10276         49 LCHPSSRLFRFLFLHVR-V-EGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM------------A--SKRVRVEGEL  112 (172)
Q Consensus        49 ~g~PSsRi~R~VLLK~~-d-e~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~------------l--~RQVRIeG~v  112 (172)
                      +|.|.+-.+-++.. -. + ++.+.|++...++|.++|..||   +|+|++..+.            -  ..-|.+.|.+
T Consensus        45 dG~P~~s~v~~~~~-~~~d~~g~~~f~~s~~~~~~~nl~~np---rvSl~v~~~~~~~~~~~~~dp~~~~~~rvtl~G~a  120 (184)
T 1xhn_A           45 RGRPFADVLSLSDG-PPGAGSGVPYFYLSPLQLSVSNLQENP---YATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSGTV  120 (184)
T ss_dssp             TTCEEEEEEECBSC-STTCCCSCCEEEECTTSHHHHHHHHCC---EEEEEEEGGGTTHHHHHTCCTTSTTSCEEEEEEEE
T ss_pred             CCcceEEEEEEEec-cCcCCCCCEEEEEeCccHhHHHHhhCC---CEEEEEecCCCccccccCCCCccccCceEEEEEEE
Confidence            57777653222210 00 3 3568899999999999999999   9999976532            1  5679999999


Q ss_pred             EEcCHHH----HHHHHhhCCC
Q psy10276        113 EILTQDR----FEDLYNREPL  129 (172)
Q Consensus       113 ekl~~ee----sd~YF~sRPr  129 (172)
                      +.++++|    .+.|+..-|.
T Consensus       121 ~~v~d~e~~~~~~~~~~~hP~  141 (184)
T 1xhn_A          121 TKVNETEMDIAKHSLFIRHPE  141 (184)
T ss_dssp             EECCGGGHHHHHHHHHHHCGG
T ss_pred             EECChHHHHHHHHHHHHHCcC
Confidence            9999743    4578876664

>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}

Probab=95.80  E-value=0.016  Score=47.92  Aligned_cols=75  Identities=13%  Similarity=0.048  Sum_probs=56.6

Q ss_pred             ccCCCCceeeEEEEeeeec-CCceEEEecCCCchhhccccccccccceeeccCC----C-CCceEEEEEeeEEcCHHH--
Q psy10276         48 HLCHPSSRLFRFLFLHVRV-EGELEILTRDRFEDLYNREPLYCKIRAHLCHPFW----M-ASKRVRVEGELEILTQDR--  119 (172)
Q Consensus        48 ~~g~PSsRi~R~VLLK~~d-e~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w----~-l~RQVRIeG~vekl~~ee--  119 (172)
                      .+|.|.+-.+-++    .| ++...|++...+.|.++|..||   +|||++..-    + ..+.|.+.|.++.+++++  
T Consensus        50 ~dG~P~~s~v~y~----~d~~g~~~~~~s~~~~h~~NL~~dp---rvSl~V~~~~~~d~~~~~rvtl~G~a~~v~~~e~~  122 (258)
T 3dnh_A           50 VSGYPYTTATNIG----IEPDGTPFFFAAGLTLHARNMETDA---RISVTLAPFGKGDALTLPRLTLVGRADRIGPDEVP  122 (258)
T ss_dssp             TTCCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCC---EEEEEECCGGGSCGGGSCEEEEEEEEEECCGGGHH
T ss_pred             CCCceEEEEEEEE----ECCCCCEEEEEeCCcHHHHHHhhCC---CEEEEEecCCCCChhhCCeEEEEEEEEEcCchHHH
Confidence            4688877643343    35 4557789999999999999999   999995421    1 346799999999999763  


Q ss_pred             --HHHHHhhCCC
Q psy10276        120 --FEDLYNREPL  129 (172)
Q Consensus       120 --sd~YF~sRPr  129 (172)
                        .+.|+..-|.
T Consensus       123 ~l~~~y~~rhP~  134 (258)
T 3dnh_A          123 LAIARYIARYPK  134 (258)
T ss_dssp             HHHHHHHHHCTT
T ss_pred             HHHHHHHHHCcC
Confidence              4668887774

>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1

Probab=95.79  E-value=0.018  Score=44.52  Aligned_cols=83  Identities=10%  Similarity=0.046  Sum_probs=60.5

Q ss_pred             chhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-C--
Q psy10276         28 TRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-A--  102 (172)
Q Consensus        28 ~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l--  102 (172)
                      +++...++.+..+.+ -+++.  +|.|.++-+-++    ++++-+.|.|...++|.++|.+||   +|+++|.--. +  
T Consensus        27 d~~ei~~~L~~~~~~-~Lat~~~dg~P~v~Pv~f~----~~~~~lyfhta~~~~k~~~l~~np---~V~~~v~~~~~~is   98 (178)
T 2fg9_A           27 DKQRIESIILQADAC-FVGITDLEGNPYVVPMNFG----YENDTLYLHSGPEGGKIEMLQRNN---NVCITFSLGHKLVY   98 (178)
T ss_dssp             CHHHHHHHHHHCSCE-EEEEECTTSCEEEEEECCE----EETTEEEEEECSCSHHHHHHHHCC---EEEEEEECCCEEEE
T ss_pred             CHHHHHHHHHhCCEE-EEEEECCCCcEEEEEEEEE----EECCEEEEEcCCcchHHHHhhcCC---cEEEEEEeCCceee
Confidence            347888888876665 45554  577777632222    355678899999999999999999   9999953221 1  


Q ss_pred             ------------CceEEEEEeeEEcCHH
Q psy10276        103 ------------SKRVRVEGELEILTQD  118 (172)
Q Consensus       103 ------------~RQVRIeG~vekl~~e  118 (172)
                                  -+.|.|.|+++.++++
T Consensus        99 ~~~~~~~~~t~~y~sV~v~G~a~~v~d~  126 (178)
T 2fg9_A           99 QHKQVACSYSMRSESAMCRGKVEFIEDM  126 (178)
T ss_dssp             EC----CEEEEEEEEEEEEEECEEECSH
T ss_pred             ccCCCCCCCcccEEEEEEEEEEEEECCH
Confidence                        3679999999999765

>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}

Probab=95.73  E-value=0.01  Score=44.87  Aligned_cols=64  Identities=19%  Similarity=0.058  Sum_probs=44.8

Q ss_pred             ehheeccee---eeeeeccceecchh-hHhhhhhcccCccccccccCCCCceeeEEEEeeeecCCceEEEecCCC
Q psy10276          8 YASVLFFFK---NVRVEGELEILTRD-RFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRF   78 (172)
Q Consensus         8 ~~~~~f~~~---~vrveg~~e~~~~~-~~~~~~~~~~~~~ki~a~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S   78 (172)
                      .++++|.|+   +|+|+|..+.++.+ ..+.+++.+|..+.+.   +.-+.+   ++||+ ++.....++.+..+
T Consensus        77 ~V~l~~~~~~~~~v~i~G~a~~v~d~e~~~~~~~~~p~~~~~~---~~~dp~---~~l~~-v~~~~a~~wd~~~~  144 (150)
T 2ig6_A           77 KVEISGMNKKGQWIRLTGEVANDDRREVKELALEAVPSLKNMY---SVDDGI---FAVLY-FTKGEGTICSFKGE  144 (150)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEECCCHHHHHHHHHHSGGGGGTC---CTTSSC---EEEEE-EEEEEEEEECSSSC
T ss_pred             CEEEEEEcCCCeEEEEEEEEEEECCHHHHHHHHHhChHHHHhh---cCCCCc---EEEEE-EECCEEEEEeCCCC
Confidence            356777774   89999999999986 5789999999988887   332333   45565 35555666665433

>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1

Probab=95.24  E-value=0.011  Score=47.08  Aligned_cols=87  Identities=3%  Similarity=-0.168  Sum_probs=62.8

Q ss_pred             ceecchhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-
Q psy10276         24 LEILTRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-  101 (172)
Q Consensus        24 ~e~~~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-  101 (172)
                      .+..+++....+.+..+.+ .+++. +|.|.++-+=++    ++++-|.|.|...++|.++|..||   +|+++|.--. 
T Consensus        17 ~~~~d~~ei~~~L~~~~~~-~Lat~~dg~P~v~Pv~f~----~~~~~lyfhta~~~~k~~~l~~np---~V~~~v~~~~~   88 (209)
T 2fur_A           17 RASYSDEDLVAMLDRNFTC-TVSFIDGGIPYAIPMMLA----SEGKTIYLHGSMKSRIYGILKTGQ---LIAISLLEING   88 (209)
T ss_dssp             CEECCHHHHHHHHHHCSEE-EEEEEETTEEEEEEEECE----EETTEEEEEEETTSHHHHHHHTTC---CEEEEEEEEEE
T ss_pred             hccCCHHHHHHHHHhCCEE-EEEEccCCEEEEEEEEEE----EECCEEEEEeCCcCHHHHHhhcCC---eEEEEEEcCCe
Confidence            4667888888888876654 44444 566766621122    345678888989999999999999   9999952211 


Q ss_pred             ------------CCceEEEEEeeEEcCHH
Q psy10276        102 ------------ASKRVRVEGELEILTQD  118 (172)
Q Consensus       102 ------------l~RQVRIeG~vekl~~e  118 (172)
                                  --+-|.|.|+++.++++
T Consensus        89 ~v~~~~~~~~t~~y~sV~v~G~a~~v~d~  117 (209)
T 2fur_A           89 IVLAKEIKNNSINYVSALIFGRPYEIDDT  117 (209)
T ss_dssp             EEECSBGGGCEEEEEEEEEEECCEECCCH
T ss_pred             eecCCCCCCCccEEEEEEEEEEEEEECCH
Confidence                        13779999999999764

>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1

Probab=95.21  E-value=0.025  Score=43.65  Aligned_cols=82  Identities=11%  Similarity=-0.063  Sum_probs=57.6

Q ss_pred             hhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCC-------
Q psy10276         29 RDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFW-------  100 (172)
Q Consensus        29 ~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w-------  100 (172)
                      .|....+.+..+.+ -+++. ++.|...-   |-. .++++-+.|.|...++|.+.|..||   +|++++.-.       
T Consensus        15 ~e~i~~~L~~~~~~-~Lat~~~g~P~~~P---v~f-~~~~~~ly~hta~~~~k~~~l~~np---~V~~~v~~~~~~~~~~   86 (185)
T 2hti_A           15 EKKITEFLNKARTG-FLGLSTNDQPYVIP---LNF-VWHNHAIYFHGASEGRKIKMIEANP---EVCFTICEDLGTIVSP   86 (185)
T ss_dssp             HHHHHHHHHHCCCE-EEEEEETTEEEEEE---ECC-EEETTEEEEEEESSSHHHHHHHHCC---EEEEEEEECC------
T ss_pred             HHHHHHHHhcCCEE-EEEEeeCCEEEEEE---EEE-EEECCEEEEEeCCcCHHHHHhhcCC---eEEEEEEecccccccc
Confidence            34478888876654 45554 45565552   211 2455678889999999999999999   999985322       


Q ss_pred             -----C-CCceEEEEEeeEEcCHH
Q psy10276        101 -----M-ASKRVRVEGELEILTQD  118 (172)
Q Consensus       101 -----~-l~RQVRIeG~vekl~~e  118 (172)
                           . --+.|.|.|+++.++++
T Consensus        87 v~~~~t~~y~sV~v~G~a~~v~d~  110 (185)
T 2hti_A           87 VPAHTDTAYMSVIIFGTIEPVSAI  110 (185)
T ss_dssp             -------CEEEEEEEEEEEECCCH
T ss_pred             ccccCcceEEEEEEEEEEEEECCH
Confidence                 1 23679999999999764

>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A

Probab=94.81  E-value=0.031  Score=45.04  Aligned_cols=86  Identities=14%  Similarity=0.018  Sum_probs=59.5

Q ss_pred             cchhhHhhhhhcccCccccccc------cCCCCceeeEEEEeeeecCCc--eEEEecCCCchhhccccccccccceeecc
Q psy10276         27 LTRDRFEDLYNREPLYCKIRAH------LCHPSSRLFRFLFLHVRVEGE--LEILTRDRFEDLYNREPLYCKIRAHLCHP   98 (172)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ki~a~------~g~PSsRi~R~VLLK~~de~G--f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~   98 (172)
                      ++++....+.+..+. +.+++.      +|.|.++-+=++    ++++.  |.|.|...++|.+.|..||   .|+++|.
T Consensus        43 ~d~~ei~~~L~~~~~-~~Lat~~~~~~~dg~P~v~Pv~f~----~d~~~~~Lyfhta~~~~K~~~l~~np---~V~~~v~  114 (216)
T 2vpa_A           43 QSDEWIRELLLRGTI-ARVATLWQGEDGAAFPFITPLAYA----YRPEQGDLVYHTNVVGRLRANAGQGH---PATLEVS  114 (216)
T ss_dssp             CCHHHHHHHHHHCCE-EEEEEEEECTTSCEEEEEEEEECE----EETTTTEEEEECCCCCSSBSSCSSEE---EEEEEEE
T ss_pred             CCHHHHHHHHHhCCE-EEEEEccCCCCCCCceEEEEEEEE----EECCeeEEEEEecCcCHHHHHhccCC---cEEEEEE
Confidence            666777888876555 455554      456666522222    34445  7888988999999999999   9999952


Q ss_pred             CCC-------------CCceEEEEEeeEEcCHHHH
Q psy10276         99 FWM-------------ASKRVRVEGELEILTQDRF  120 (172)
Q Consensus        99 ~w~-------------l~RQVRIeG~vekl~~ees  120 (172)
                      --.             --+.|.|.|+++.+++++-
T Consensus       115 ~~~~~v~~~~~~~~t~~y~sV~v~G~a~~vd~~e~  149 (216)
T 2vpa_A          115 EIGQFLPSNSPLELSVQYRSVMVFGTARVLAGEDA  149 (216)
T ss_dssp             EEEEEECCSSGGGCEEEEEEEEEEEEEEECCHHHH
T ss_pred             eCCeeccCccCCCCcccEEEEEEEEEEEEECHHHH
Confidence            211             1378999999999954443

>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}

Probab=94.37  E-value=0.058  Score=44.73  Aligned_cols=73  Identities=11%  Similarity=-0.050  Sum_probs=52.8

Q ss_pred             ccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhcccccccccc-ceeeccC-----CC--CCceEEE
Q psy10276         39 EPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIR-AHLCHPF-----WM--ASKRVRV  108 (172)
Q Consensus        39 ~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~-AAL~F~~-----w~--l~RQVRI  108 (172)
                      +.+.+-+++  .+|.|.+-.+=++    .+++.+.|+++..++|.++|..||   . |||++.-     ..  ..+-|.|
T Consensus        97 ~~~~~~LAT~~~dG~P~~s~v~~~----~~~g~~~~~~s~~a~h~~NL~~nP---~rvSl~v~e~e~~~~~~~~~~rltl  169 (251)
T 3swj_A           97 SFNSVALATLNANGEVVCSYAPFV----STQWGNYIYISEVSEHFNNIKVNP---NNIEIMFLEDESKAASVILRKRLRY  169 (251)
T ss_dssp             TCSEEEEEEECTTSCEEEEEEEEE----EETTEEEEEEETTSHHHHHHHHST---TCEEEEEECCTTTSSCTTCCCEEEE
T ss_pred             hCCEEEEEEECCCCCEEEEEEEEE----EECCEEEEEEeCchHHHHHHHhCC---CeEEEEEEcCcccccCccccceEEE
Confidence            444444544  3677877643344    346789999999999999999999   5 8998421     11  3477999


Q ss_pred             EEeeEEcCHH
Q psy10276        109 EGELEILTQD  118 (172)
Q Consensus       109 eG~vekl~~e  118 (172)
                      .|+++.++++
T Consensus       170 ~G~a~~v~~~  179 (251)
T 3swj_A          170 RVNASFLERG  179 (251)
T ss_dssp             EEEEEECCSS
T ss_pred             EEEEEEecCh
Confidence            9999999874

>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}

Probab=92.79  E-value=0.16  Score=38.48  Aligned_cols=92  Identities=12%  Similarity=0.014  Sum_probs=56.8

Q ss_pred             cceecchhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC
Q psy10276         23 ELEILTRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM  101 (172)
Q Consensus        23 ~~e~~~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~  101 (172)
                      .++.++++....+.++. +.+.++.. +|.|...=+-++    ++++-+.|.|.. .+|...|..||   ++|++..--.
T Consensus         5 ~~~~l~~~e~~~lL~~~-~~g~La~~~dg~P~vvPv~f~----~~~~~iyfh~a~-g~K~~~i~~~~---~V~f~vd~~~   75 (138)
T 3fkh_A            5 PVNILNEQEALERLQSV-SLGRVVVRRSDEMDIFPVNFI----VDKGAIYIRTAE-GNKLFSMNLNH---DVLFEADEVK   75 (138)
T ss_dssp             SEEEECHHHHHHHHTTC-SEEEEEEEETTEEEEEEEEEE----EETTEEEEEEEC---------CCS---EEEEEEEEEE
T ss_pred             ccccCCHHHHHHHHccC-CEEEEEEeeCCEEEEEEEEEE----EECCEEEEEeCC-ChHHHHhhcCC---CEEEEEEECC
Confidence            56789999999999764 45667654 445555422333    456667777776 56999999999   9999854211


Q ss_pred             --CCceEEEEEeeEEcCHH-HHHHH
Q psy10276        102 --ASKRVRVEGELEILTQD-RFEDL  123 (172)
Q Consensus       102 --l~RQVRIeG~vekl~~e-esd~Y  123 (172)
                        -...|.|.|+++.|+++ |-.+.
T Consensus        76 ~~~~~SV~v~G~a~~v~d~~e~~~a  100 (138)
T 3fkh_A           76 DGKAWSVVVRATAEIVRKLDEIAYA  100 (138)
T ss_dssp             TTEEEEEEEEEEEEECCSHHHHHHH
T ss_pred             CCCCEEEEEEEEEEEECCHHHHHHH
Confidence              12279999999999764 43333

>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}

Probab=91.45  E-value=0.21  Score=36.77  Aligned_cols=38  Identities=24%  Similarity=0.405  Sum_probs=29.6

Q ss_pred             hheecce------eeeeeeccceecchhhHhhhhhcccCccccc
Q psy10276          9 ASVLFFF------KNVRVEGELEILTRDRFEDLYNREPLYCKIR   46 (172)
Q Consensus         9 ~~~~f~~------~~vrveg~~e~~~~~~~~~~~~~~~~~~ki~   46 (172)
                      ++++|.+      ++|+|+|..+.++.+....+++.+|....+.
T Consensus        63 V~l~~~~~~~~~~~~v~i~G~a~~v~d~~~~~~~~~~p~~~~~~  106 (150)
T 2hhz_A           63 VAMTAISEEGYLIQVVRVEGTARPVENDYLKTVFADNPYYQHIY  106 (150)
T ss_dssp             EEEEEEECSTTCCEEEEEEEEEEEECHHHHHHHHTTCGGGGGGC
T ss_pred             EEEEEEcCCcceeEEEEEEEEEEECCcHHHHHHHHhChhhhhcc
Confidence            4555554      4799999999999988889998888765554

>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}

Probab=90.78  E-value=0.16  Score=40.06  Aligned_cols=85  Identities=15%  Similarity=0.074  Sum_probs=59.0

Q ss_pred             ceecchhhHh---hhhhcc--cCccccccccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeecc
Q psy10276         24 LEILTRDRFE---DLYNRE--PLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHP   98 (172)
Q Consensus        24 ~e~~~~~~~~---~~~~~~--~~~~ki~a~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~   98 (172)
                      +|+..||-.|   ++||.-  |=-.-+.+.+|.|..-+  +--.+-+|++-+.+-.|+..+=.++|.+||   +||++ +
T Consensus        11 ~~~~~~~~~~~~r~l~~~~v~~~~LATAdkdG~PNVa~--~~~~~~~Dd~tI~iad~f~~kT~~NL~eNP---~aav~-~   84 (148)
T 3in6_A           11 LEIMDRELLEKARSLINANYISTTLSTVDRNYEVNIAV--ISVLEMIGDDTIICARFGADKTYANLKETG---KGVFM-V   84 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSEEEEEECTTCCEEEEE--CCCEEEETTTEEEEEESSCHHHHHHHHHHC---EEEEE-E
T ss_pred             HHHHHHHHHHHHHHHHhCCcceEEEEEcCCCCCccEEE--EeeeEEecCCEEEEEeccchhHHHHHHhCC---cEEEE-E
Confidence            5667777655   577776  44455677788888764  222344687777777788888899999999   99999 4


Q ss_pred             C----CCCCceEEEEEeeEE
Q psy10276         99 F----WMASKRVRVEGELEI  114 (172)
Q Consensus        99 ~----w~l~RQVRIeG~vek  114 (172)
                      |    +.-.++.|+.+....
T Consensus        85 ~~~~~~~~~KG~Rl~l~~~e  104 (148)
T 3in6_A           85 LLTDNDKSKDGIRVYVELSA  104 (148)
T ss_dssp             EEESSSCEEEEEEEEEEEEE
T ss_pred             EEcCCCCccceEEEEEEEEE
Confidence            4    223577777764433

>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}

Probab=88.91  E-value=0.19  Score=37.48  Aligned_cols=65  Identities=15%  Similarity=0.056  Sum_probs=40.2

Q ss_pred             ehheeccee----eeeeeccceecch-hhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCch
Q psy10276          8 YASVLFFFK----NVRVEGELEILTR-DRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFED   80 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~-~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~K   80 (172)
                      +++|+|.|+    +|+|+|..+.++. +..+.+++.  .   ..+|  .++....   +++|+ +..+...|+.+..+-.
T Consensus        68 ~v~l~~~~~~~~~~v~v~G~a~~~~d~~~~~~~~~~--~---~~~~~~~g~~dp~---~~vl~-v~p~~~e~W~~~~~~~  138 (147)
T 3dmb_A           68 RVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNP--Y---VAAWYEGGKDDPK---LALLR-LDADHAQIWLNGSSLL  138 (147)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEECCCHHHHHHHCCH--H---HHHHCTTGGGCTT---CEEEE-EEEEEEEEEECCCCCC
T ss_pred             eEEEEEEcCCCCeEEEEEEEEEEecCHHHHHHHhhH--H---HHHHccCCCCCCC---EEEEE-EEcCEEEEEECCCCce
Confidence            578899885    8999999999975 456666642  1   1122  1222222   24454 3556778888876655


Q ss_pred             h
Q psy10276         81 L   81 (172)
Q Consensus        81 g   81 (172)
                      +
T Consensus       139 ~  139 (147)
T 3dmb_A          139 A  139 (147)
T ss_dssp             C
T ss_pred             e
Confidence            4

>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}

Probab=85.94  E-value=0.93  Score=37.87  Aligned_cols=73  Identities=8%  Similarity=-0.050  Sum_probs=53.8

Q ss_pred             ccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhcccccccccc-ceeeccC-----C-C-CCceEEE
Q psy10276         39 EPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIR-AHLCHPF-----W-M-ASKRVRV  108 (172)
Q Consensus        39 ~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~-AAL~F~~-----w-~-l~RQVRI  108 (172)
                      +-+.+-+++-  +|.|.+-.+=++    .+++++.+++..-++|.++|..||   . |+|++.=     . + ..+-+.+
T Consensus        97 ~~~~~~LAT~~~~G~P~~S~v~f~----~~~g~~~iliS~lA~Ht~NL~~np---~rvSllviede~~~~~~~a~~Rlt~  169 (259)
T 3gas_A           97 GFDSVCLATLHPNGHVVCSYAPLM----SDGKQYYIYVSEVAEHFAGLKNNP---HNVEVMFLEDESKAKSAILRKRLRY  169 (259)
T ss_dssp             TCSEEEEEEECTTSCEEEEEEEEE----EETTEEEEEEETTSHHHHHHHHST---TSEEEEEECCTTTSSBTTBCCEEEE
T ss_pred             hCCEEEEEeeCcCCCEEEEEEEEE----EECCEEEEEEeCchHHHHHHHhCC---CeEEEEEEeCccccCChhhcCeEEE
Confidence            4456666665  477877654444    345789999999999999999999   7 8888411     1 1 3478999


Q ss_pred             EEeeEEcCHH
Q psy10276        109 EGELEILTQD  118 (172)
Q Consensus       109 eG~vekl~~e  118 (172)
                      .|.++.|+++
T Consensus       170 ~g~A~~v~~~  179 (259)
T 3gas_A          170 KTNTRFIERG  179 (259)
T ss_dssp             EEEEEEECSS
T ss_pred             EEEEEECCCc
Confidence            9999999874

>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*

Probab=83.60  E-value=0.58  Score=35.50  Aligned_cols=70  Identities=11%  Similarity=-0.013  Sum_probs=50.8

Q ss_pred             ccccc-cCCCCcee--eEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC------CCceEEEEEeeEE
Q psy10276         44 KIRAH-LCHPSSRL--FRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM------ASKRVRVEGELEI  114 (172)
Q Consensus        44 ki~a~-~g~PSsRi--~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~------l~RQVRIeG~vek  114 (172)
                      -|.++ +|.|...-  .+.  ++-.||+-+.+-.|+-.+--++|.+||   ++|+++.=|.      ..+-.+|+|+++-
T Consensus        17 ~iaT~~~g~Pnvvptw~~~--~~v~dD~~ili~~~~~~kT~~Nl~~N~---kvai~v~~~e~~g~~g~~~gf~ikGta~~   91 (122)
T 3a6r_A           17 AIATQGEDGPHLVNTWNSY--LKVLDGNRIVVPVGGMHKTEANVARDE---RVLMTLGSRKVAGRNGPGTGFLIRGSAAF   91 (122)
T ss_dssp             EEEEECSSSEEEEEEEGGG--CEEETTTEEEEEESSCHHHHHHHHHCC---EEEEEEEEEEEECSSSEEEEEEEEEEEEE
T ss_pred             EEEEcCCCCCcEEeeeceE--EEEecCCEEEEEccccHHHHHHHhhCC---eEEEEEEecccccccCCCceEEEEEEEEE
Confidence            35533 66777421  111  333677889999999999999999999   9999933243      3467999999999


Q ss_pred             cCHH
Q psy10276        115 LTQD  118 (172)
Q Consensus       115 l~~e  118 (172)
                      +++-
T Consensus        92 ~~~G   95 (122)
T 3a6r_A           92 RTDG   95 (122)
T ss_dssp             ESSS
T ss_pred             Eecc
Confidence            8864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	172
d1nrga_	213	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Huma	100.0
d2a2ja1	201	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Myco	100.0
d1ci0a_	205	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Bake	100.0
d1dnla_	199	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Esch	100.0
d1t9ma_	204	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseu	100.0
d1ci0a_	205	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Bake	99.13
d1nrga_	213	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Huma	99.11
d2a2ja1	201	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Myco	99.02
d1dnla_	199	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Esch	98.95
d2i02a1	143	General stress protein 26 {Nostoc punctiforme pcc	98.88
d2hq7a1	141	Hypotheical protein CAC3491 {Clostridium acetobuty	98.86
d1t9ma_	204	Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseu	98.84
d2fhqa1	135	Putative general stress protein BT1439 {Bacteroide	98.45
d1w9aa_	142	Hypothetical protein Rv1155 {Mycobacterium tubercu	98.13
d1rfea_	160	Hypothetical protein Rv2991 {Mycobacterium tubercu	98.1
d2asfa1	125	Hypothetical protein Rv2074 {Mycobacterium tubercu	97.96
d1flma_	122	FMN-binding protein {Desulfovibrio vulgaris, strai	97.34
d1vl7a_	135	Hypothetical protein Alr5027 {Cyanobacterium (Nost	97.28
d2fg9a1	157	5-nitroimidazole resistance protein BT3078 {Bacter	97.13
d2htia1	156	Hypothetical protein BH0577 {Bacillus halodurans [	96.32
d2hq9a1	148	Hypothetical protein Mll6688 {Mesorhizobium loti [	96.25
d2arza1	238	Hypothetical protein PA4388 {Pseudomonas aeruginos	95.57
d2fura1	193	Hypothetical protein Ta1372 {Thermoplasma acidophi	91.2
d1xhna1	170	Cellular repressor of E1A-stimulated genes CREG1 {	88.06
d2vpaa1	194	NimA-related protein DR0842 {Deinococcus radiodura	87.52
d2hq7a1	141	Hypotheical protein CAC3491 {Clostridium acetobuty	81.9

>d1nrga_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-42  Score=283.15  Aligned_cols=126  Identities=20%  Similarity=0.264  Sum_probs=115.8

Q ss_pred             ccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         39 EPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        39 ~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      +|.-+-+.+.  +|.|++|   |||||+++++||+|||||.|+||+||++||   +|||+ |||+ |+|||||+|.|+++
T Consensus        29 ep~am~LATvd~~G~P~~R---~Vllk~i~~~g~~FfTn~~S~K~~el~~Np---~aal~-f~W~~l~RQvRi~G~~~~l  101 (213)
T d1nrga_          29 EANAMCLATCTRDGKPSAR---MLLLKGFGKDGFRFFTNFESRKGKELDSNP---FASLV-FYWEPLNRQVRVEGPVKKL  101 (213)
T ss_dssp             CTTEEEEEEECTTSCEEEE---EEECCCEETTEEEEEEETTSHHHHHHHHSC---EEEEE-EEEGGGTEEEEEEEEEEEC
T ss_pred             CccEEEEEEECCCCCEEEE---EEeeehhhccceEEEeccCchhhhhhhcCC---ceEEE-EechhhheeeeeeEeeeec
Confidence            4555555554  5778776   799999999999999999999999999999   99999 7776 99999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++||+||++||++|||+||+|+||+++ |++.|++++++++++|.+ ++||||+||
T Consensus       102 ~~~~~~~yf~~Rp~~sqi~a~~s~QS~~i~~~~~l~~~~~~~~~~~~~-~~vp~P~~w  158 (213)
T d1nrga_         102 PEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQD-QEVPKPKSW  158 (213)
T ss_dssp             CHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTT-SCCCCCTTE
T ss_pred             ccHhhhHHHhcCCcccccceeeccccCCCCCHHHHHHHHHHHHHHccC-CCCCCCCcc
Confidence            99999999999999999999999999998 899999999999999985 579999997

>d2a2ja1 b.45.1.1 (A:24-224) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.3e-41  Score=274.94  Aligned_cols=128  Identities=12%  Similarity=0.135  Sum_probs=115.4

Q ss_pred             cccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         38 REPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        38 ~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      .+|..+-+.+. +|.|++|   |||||+++++||+|||||.|+|++||++||   +|||+ |||+ +.|||||+|.|+++
T Consensus        35 ~ep~a~~LaTv~~g~P~~R---~VlLk~i~~~g~~F~Tn~~S~K~~~l~~Np---~vsl~-f~w~~~~rQvRI~G~a~~l  107 (201)
T d2a2ja1          35 SEPNAMVLATVADGKPVTR---SVLCKILDESGVAFFTSYTSAKGEQLAVTP---YASAT-FPWYQLGRQAHVQGPVSKV  107 (201)
T ss_dssp             SSTTEEEEEEEETTEEEEE---EEEEEEEETTEEEEEEETTSHHHHHHHHSC---EEEEE-EEEGGGTEEEEEEEEEEEC
T ss_pred             CCccEEEEEEecCCceeee---EEEhhheeccceEEEecCCchhhhhhccCC---ceEEE-EechhHhhHHHHHHHHhhc
Confidence            45665555554 3456555   899999999999999999999999999999   99999 6665 99999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++|++||++||++|||+||+|+||+++ +++.|+++++++.++|++..+||||+||
T Consensus       108 ~~~~s~~yf~~Rp~~sqi~a~~s~QS~~i~~~~~l~~~~~~~~~~~~~~~~ip~P~~w  165 (201)
T d2a2ja1         108 STEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGW  165 (201)
T ss_dssp             CHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTE
T ss_pred             chHHHHHHHhccCcccccceeeccccccccchhhhhhhhhhHHHhhcCCCCCCCCCce
Confidence            99999999999999999999999999999 8999999999999999865569999997

>d1ci0a_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-40  Score=269.43  Aligned_cols=127  Identities=20%  Similarity=0.236  Sum_probs=116.1

Q ss_pred             ccCcccccc---ccCCCCceeeEEEEeeeecCCceEEEecC-CCchhhccccccccccceeeccCCC-CCceEEEEEeeE
Q psy10276         39 EPLYCKIRA---HLCHPSSRLFRFLFLHVRVEGELEILTRD-RFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELE  113 (172)
Q Consensus        39 ~~~~~ki~a---~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~-~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~ve  113 (172)
                      .|.-+-+++   .+|.|++|   |||||++|++||+||||| .|+|++||++||   +|||| |||+ +.|||||+|.|+
T Consensus        31 ~p~a~~LATvd~~~G~P~~R---tVllr~~~~~g~~fftn~~~S~K~~el~~Np---~asl~-f~w~~~~rQvRI~G~~~  103 (205)
T d1ci0a_          31 LPEAITFSSAELPSGRVSSR---ILLFKELDHRGFTIYSNWGTSRKAHDIATNP---NAAIV-FFWKDLQRQVRVEGITE  103 (205)
T ss_dssp             CTTEEEEEEEETTTTEEEEE---EEECCEECSSSEEEEEECSSSHHHHHHHHCC---EEEEE-EEETTTTEEEEEEEEEE
T ss_pred             CcceEEEEEeecCCCccchh---hHHHHhhccceEEEEEccccChhhhhhhcCC---ceEEE-EechhheeeeeEEEeee
Confidence            366555555   45778876   799999999999999998 699999999999   99999 6776 999999999999


Q ss_pred             EcCHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        114 ILTQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       114 kl~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++++||+||++||++|||+||+|+||+++ ++++|+++.+++.+++.+++++|+|+||
T Consensus       104 ~~~~~~sd~yf~~rp~~sqi~a~~s~qs~~~~~~~~l~~~~~~~~~~~~~~~~~p~P~~w  163 (205)
T d1ci0a_         104 HVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYW  163 (205)
T ss_dssp             ECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTTE
T ss_pred             cCCHHHHHHHHhcCChhhccceecccccccccchhhHHHHHHHHHHHhccccCCCCCCce
Confidence            9999999999999999999999999999998 8999999999999999866679999997

>d1dnla_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.9e-40  Score=266.08  Aligned_cols=126  Identities=17%  Similarity=0.198  Sum_probs=115.0

Q ss_pred             ccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         39 EPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        39 ~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      .|--+-+++  .+|.|++|   |||||+++++||+|||||+|+|++||++||   +|||| |||+ +.|||||+|.|+++
T Consensus        30 ~p~A~~LATvd~~g~P~~R---tV~lr~~~~~g~~F~Tn~~S~K~~el~~Np---~asl~-f~w~~~~rQiRi~G~~~~~  102 (199)
T d1dnla_          30 DPTAMVVATVDEHGQPYQR---IVLLKHYDEKGMVFYTNLGSRKAHQIENNP---RVSLL-FPWHTLERQVMVIGKAERL  102 (199)
T ss_dssp             CTTEEEEEEECTTSCEEEE---EEECCEEETTEEEEEEETTSHHHHHHHHCC---EEEEE-ECCGGGTEEEEEEEEEEEC
T ss_pred             CCCEEEEEEECCCCCEecc---eeehhhcccCceEEEecccchhhhhhhcCC---ceEEE-EeecchheeeEEEEEeeec
Confidence            455555554  45677776   899999999999999999999999999999   99999 7776 99999999999999


Q ss_pred             CHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        116 TQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       116 ~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      +++++|+||++||++|||+||+|+||+++ |+++|+++++++.+++.+ .++|+|+||
T Consensus       103 ~~~~sd~~f~~rp~~sqi~a~~s~Qs~~i~~~~~l~~~~~~~~~~~~~-~~~p~p~~w  159 (199)
T d1dnla_         103 STLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQ-GEVPLPSFW  159 (199)
T ss_dssp             CHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTT-SSCCCCTTE
T ss_pred             ccHHHHhHhhccCccceeeeeccccccccccHHHHHHHHHHHHhhccc-CCCCCCCce
Confidence            99999999999999999999999999998 899999999999999975 469999997

>d1t9ma_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.2e-36  Score=245.52  Aligned_cols=125  Identities=18%  Similarity=0.202  Sum_probs=113.8

Q ss_pred             cccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEE
Q psy10276         38 REPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEI  114 (172)
Q Consensus        38 ~~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vek  114 (172)
                      ..|..+-+++  .+|.|++|   +|+||++|++||+||||++|+|+++|+.||   +|||| |||+ +.|||||+|.|++
T Consensus        36 ~~p~a~~LATv~~dG~P~~R---tVvLr~~~~~~~~f~T~~~S~K~~~l~~np---~~sl~-f~w~~~~rQvRi~G~~~~  108 (204)
T d1t9ma_          36 REPRALALATVDGQGRPSTR---IVVIAELGERGVVFATHADSQKGRELAQNP---WASGV-LYWRESSQQIILNGRAER  108 (204)
T ss_dssp             SSTTEEEEEEECTTSCEEEE---EEECCEECSSEEEEEEETTSHHHHHHHHCC---EEEEE-EEETTTTEEEEEEEEEEE
T ss_pred             CCCCEEEEEEECCCCCEeee---hhhHHHhhhhceEEEEecchhhhhhhhccc---ccEEE-EecccceEEEEEEEEEee
Confidence            4688888877  45888887   799999999999999999999999999999   99999 6776 9999999999999


Q ss_pred             cCHHHHHHHHhhCCCCCcceeeecCCCCcc-CHHHHHHHHHHHHhHhcCCCCCCCCCCC
Q psy10276        115 LTQDRFEDLYNREPLYCKIRAHLCHQDQAT-DWDEAKATHDAIYDKCKRGVDLPMPGHL  172 (172)
Q Consensus       115 l~~eesd~YF~sRPr~SQIgAwaS~QS~~i-~R~~Le~r~~~~~~kf~~~~~VPrP~~~  172 (172)
                      ++++++++||++||++|||+||+|+||+++ |++.|+.+++++.+.   +.+||+|+||
T Consensus       109 l~~~~~~~~~~~rp~~s~~~a~~s~qs~~i~~~~~l~~~~~~~~~~---~~~~p~p~~~  164 (204)
T d1t9ma_         109 LPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAET---DGPLPRPPGY  164 (204)
T ss_dssp             CCHHHHHHHHHHSCGGGHHHHHHCCTTSBCSCHHHHHHHHHHHTTS---CSCCCCCTTE
T ss_pred             ccHHHHHHHHhcCchhcccceeecCcccccchhhhHHHHHHhhhhc---cCCCCCCCce
Confidence            999999999999999999999999999999 999999999887542   2469999987

>d1ci0a_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.13  E-value=1.4e-12  Score=104.88  Aligned_cols=75  Identities=32%  Similarity=0.483  Sum_probs=57.9

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCceeeEEEEeeeecCCceEEEecCCCchhhc
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYN   83 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~e   83 (172)
                      +|||+|+|+    ||||+|..++++.+.++.||++||++|+||||.+.+|..+        .+.+.+.--......+..+
T Consensus        82 ~asl~f~w~~~~rQvRI~G~~~~~~~~~sd~yf~~rp~~sqi~a~~s~qs~~~--------~~~~~l~~~~~~~~~~~~~  153 (205)
T d1ci0a_          82 NAAIVFFWKDLQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVI--------KNREELDELTQKNTERFKD  153 (205)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEE--------SCHHHHHHHHHHHHHHTTS
T ss_pred             ceEEEEechhheeeeeEEEeeecCCHHHHHHHHhcCChhhccceecccccccc--------cchhhHHHHHHHHHHHhcc
Confidence            689999996    9999999999999999999999999999999999999984        2223332111122333444


Q ss_pred             ccccccc
Q psy10276         84 REPLYCK   90 (172)
Q Consensus        84 L~~nP~~   90 (172)
                      -.+.|||
T Consensus       154 ~~~~p~P  160 (205)
T d1ci0a_         154 AEDIPCP  160 (205)
T ss_dssp             CSSCCCC
T ss_pred             ccCCCCC
Confidence            4678999

>d1nrga_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.1e-12  Score=106.97  Aligned_cols=49  Identities=33%  Similarity=0.590  Sum_probs=47.1

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|||+|+|+    ||||+|..+.++++.++.||.+||++|+|+||.+++|..+
T Consensus        78 ~aal~f~W~~l~RQvRi~G~~~~l~~~~~~~yf~~Rp~~sqi~a~~s~QS~~i  130 (213)
T d1nrga_          78 FASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVI  130 (213)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTSCC
T ss_pred             ceEEEEechhhheeeeeeEeeeecccHhhhHHHhcCCcccccceeeccccCCC
Confidence            689999996    9999999999999999999999999999999999999984

>d2a2ja1 b.45.1.1 (A:24-224) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.02  E-value=5.1e-12  Score=102.09  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=46.9

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +||++|+|+    ||||+|..++++.+.+..||++||++|+||||.+++|..+
T Consensus        84 ~vsl~f~w~~~~rQvRI~G~a~~l~~~~s~~yf~~Rp~~sqi~a~~s~QS~~i  136 (201)
T d2a2ja1          84 YASATFPWYQLGRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPV  136 (201)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCC
T ss_pred             ceEEEEechhHhhHHHHHHHHhhcchHHHHHHHhccCcccccceeeccccccc
Confidence            689999996    9999999999999999999999999999999999999874

>d1dnla_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Escherichia coli [TaxId: 562]

Probab=98.95  E-value=6.3e-11  Score=94.79  Aligned_cols=49  Identities=29%  Similarity=0.371  Sum_probs=47.0

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|||+|+|+    ||||+|..++++.+.++.||++||++|+|+||.+.||+.+
T Consensus        79 ~asl~f~w~~~~rQiRi~G~~~~~~~~~sd~~f~~rp~~sqi~a~~s~Qs~~i  131 (199)
T d1dnla_          79 RVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRI  131 (199)
T ss_dssp             EEEEEECCGGGTEEEEEEEEEEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCC
T ss_pred             ceEEEEeecchheeeEEEEEeeecccHHHHhHhhccCccceeeeecccccccc
Confidence            689999996    9999999999999999999999999999999999999973

>d2i02a1 b.45.1.1 (A:5-147) General stress protein 26 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: General stress protein 26
species: Nostoc punctiforme pcc 73102 [TaxId: 63737]

Probab=98.88  E-value=9.2e-10  Score=81.08  Aligned_cols=79  Identities=10%  Similarity=-0.000  Sum_probs=58.5

Q ss_pred             cCcccccc--ccCCCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         40 PLYCKIRA--HLCHPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        40 ~~~~ki~a--~~g~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      .+.+-+++  .+|.|.+|.  |.++...+++| +.|+|+..|+|.++|..||   +|||+ ++++ ..++|+|+|.++.+
T Consensus        17 ~~~~~laT~~~dG~P~~~p--m~~~~~~~~~~~i~f~t~~~s~K~~~l~~np---~vsl~-~~~~~~~~~v~i~G~A~iv   90 (143)
T d2i02a1          17 IDYGMFTTVDDDGSLHSYP--MSKSGDINSEATLWFFTYAGSHKVTEIEHHE---QVNVS-FSSPEQQRYVSISGTSQLV   90 (143)
T ss_dssp             CCEEEEEEECTTSCEEEEE--EECBCC---CCEEEEEEETTSHHHHHHHHCC---EEEEE-EEETTTTEEEEEEEEEEEE
T ss_pred             CCEEEEEEECCCCCEEEEE--EEEEEecCCCcEEEEEcCCcchhhhhhccCc---eEEEE-EEeCCCCeEEEEEEEEEEE
Confidence            44445555  567888884  45555555554 7799999999999999999   99999 4554 88999999999998


Q ss_pred             CH-HHHHHHH
Q psy10276        116 TQ-DRFEDLY  124 (172)
Q Consensus       116 ~~-eesd~YF  124 (172)
                      .+ +..++||
T Consensus        91 ~d~~~~~~~w  100 (143)
T d2i02a1          91 KDRNKMRELW  100 (143)
T ss_dssp             CCHHHHHHHC
T ss_pred             cCHHHHHHHH
Confidence            74 4456665

>d2hq7a1 b.45.1.1 (A:2-142) Hypotheical protein CAC3491 {Clostridium acetobutylicum [TaxId: 1488]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypotheical protein CAC3491
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.86  E-value=1e-09  Score=81.20  Aligned_cols=78  Identities=13%  Similarity=0.017  Sum_probs=58.9

Q ss_pred             cCccccc--cccCCCCceeeEEEEeeeecCC-ceEEEecCCCchhhccccccccccceeeccCCC-CCceEEEEEeeEEc
Q psy10276         40 PLYCKIR--AHLCHPSSRLFRFLFLHVRVEG-ELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-ASKRVRVEGELEIL  115 (172)
Q Consensus        40 ~~~~ki~--a~~g~PSsRi~R~VLLK~~de~-Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-l~RQVRIeG~vekl  115 (172)
                      ++-+-++  ..+|.|.+|.  |..++ .+++ -|.|+|+..|+|.++|..||   +|+|+ ++++ ..+||+|+|.++.+
T Consensus        16 ~~~~~LaT~~~dG~P~~~p--~~~~~-~~~~~~l~f~T~~~s~K~~~l~~np---~vsl~-~~~~~~~~~v~i~G~a~i~   88 (141)
T d2hq7a1          16 SKIVMVGTNGENGYPNIKA--MMRLK-HDGLKKFWLSTNTSTRMVERLKKNN---KICLY-FVDDNKFAGLMLVGTIEIL   88 (141)
T ss_dssp             CSEEEEEEECGGGCEEEEE--EEEEE-EETTTEEEEEEECCHHHHHHHHHCC---EEEEE-EECSSSSEEEEEEEEEEEE
T ss_pred             CCEEEEEEECCCCCEeEEE--EEEEE-eccCCEEEEEecCCChHHHHHHhCC---ccEEE-EecCCCceEEEEEEEEEEE
Confidence            3344444  3567888884  34444 4444 49999999999999999999   99999 5555 88999999999999


Q ss_pred             CHHHH-HHHH
Q psy10276        116 TQDRF-EDLY  124 (172)
Q Consensus       116 ~~ees-d~YF  124 (172)
                      ++.+. .++|
T Consensus        89 ~d~~~~~~~w   98 (141)
T d2hq7a1          89 HDRASKEMLW   98 (141)
T ss_dssp             CCHHHHHHHC
T ss_pred             cCHHHHHHHH
Confidence            86665 4554

>d1t9ma_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Pyridoxine 5'-phoshate oxidase (PNP oxidase)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.84  E-value=3.1e-10  Score=91.02  Aligned_cols=49  Identities=18%  Similarity=0.333  Sum_probs=46.9

Q ss_pred             ehheeccee----eeeeeccceecchhhHhhhhhcccCccccccccCCCCcee
Q psy10276          8 YASVLFFFK----NVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPSSRL   56 (172)
Q Consensus         8 ~~~~~f~~~----~vrveg~~e~~~~~~~~~~~~~~~~~~ki~a~~g~PSsRi   56 (172)
                      +|||+|+|+    ||||+|.++.++.+.++.||++||++|||+||.+.||+-+
T Consensus        86 ~~sl~f~w~~~~rQvRi~G~~~~l~~~~~~~~~~~rp~~s~~~a~~s~qs~~i  138 (204)
T d1t9ma_          86 WASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETL  138 (204)
T ss_dssp             EEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHHSCGGGHHHHHHCCTTSBC
T ss_pred             ccEEEEecccceEEEEEEEEEeeccHHHHHHHHhcCchhcccceeecCccccc
Confidence            689999996    9999999999999999999999999999999999999873

>d2fhqa1 b.45.1.1 (A:3-137) Putative general stress protein BT1439 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Putative general stress protein BT1439
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.45  E-value=6.5e-08  Score=70.56  Aligned_cols=76  Identities=14%  Similarity=0.115  Sum_probs=55.6

Q ss_pred             Ccccccc--ccCCCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccCCCCCceEEEEEeeEEcCH
Q psy10276         41 LYCKIRA--HLCHPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEILTQ  117 (172)
Q Consensus        41 ~~~ki~a--~~g~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG~vekl~~  117 (172)
                      +.+-+++  .+|.|.+|.  |..+. .+++| +.|.|+..|+|.++|..||   +|||+ ++. -.++|+|+|+++.+++
T Consensus        16 ~~~~laT~~~dG~P~~~p--~~~~~-~~~~~~i~f~t~~~s~k~~~i~~np---~vsl~-~~~-~~~~v~i~G~a~i~~d   87 (135)
T d2fhqa1          16 EVVTLASVNKEGYPRPVP--MSKIA-AEGISTIWMSTGADSLKTIDFLSNP---KAGLC-FQE-KGDSVALMGEVEVVTD   87 (135)
T ss_dssp             SEEEEEEECTTSCEEEEE--EECCE-EETTTEEEEEEETTSHHHHHHHHCC---EEEEE-EEE-TTEEEEEEEEEEEECC
T ss_pred             CEEEEEEECCCCCEEEEE--EEEEE-ECCCCEEEEEEcCCChHHHHHhcCC---eEEEE-EEe-CCCEEEEEEEEEEEeC
Confidence            3444554  466777773  22333 34444 8899999999999999999   99999 444 4789999999999987


Q ss_pred             HHH-HHHH
Q psy10276        118 DRF-EDLY  124 (172)
Q Consensus       118 ees-d~YF  124 (172)
                      .+. +++|
T Consensus        88 ~~~~~~~w   95 (135)
T d2fhqa1          88 EKLKQELW   95 (135)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHHHHH
Confidence            654 4554

>d1w9aa_ b.45.1.1 (A:) Hypothetical protein Rv1155 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Rv1155
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.13  E-value=1.1e-06  Score=64.41  Aligned_cols=73  Identities=11%  Similarity=-0.037  Sum_probs=52.2

Q ss_pred             cCcccccc--ccCCCCceeeEEEEeeeecCCc--eEEEecCCCchhhccccccccccceeeccCCCCCceEEEEEeeEEc
Q psy10276         40 PLYCKIRA--HLCHPSSRLFRFLFLHVRVEGE--LEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEIL  115 (172)
Q Consensus        40 ~~~~ki~a--~~g~PSsRi~R~VLLK~~de~G--f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG~vekl  115 (172)
                      ++.+-+++  .+|.|.++.   |..- .++++  +.|.|+..|+|.++|+.||   +|||++..-...++|+|+|+++.+
T Consensus        12 ~~~~~LaTv~~dG~P~~~p---v~~~-~~~~~~~~~~~t~~~s~K~~nl~~nP---rvsl~v~~~~~~~~v~i~G~a~~~   84 (142)
T d1w9aa_          12 NSIGVLATIKHDGRPQLSN---VQYH-FDPRKLLIQVSIAEPRAKTRNLRRDP---RASILVDADDGWSYAVAEGTAQLT   84 (142)
T ss_dssp             CSEEEEEEECTTSCEEEEE---EECE-EETTTTEEEEEEECCCGGGGGGGTCC---EEEEEEECSSSSCEEEEEEECEEC
T ss_pred             CCeEEEEEECCCCCeEEEe---eeee-eeccCceEEeccccHHHHHHHhccCC---eEEEEEEcCCCceEEEEEEEEEEE
Confidence            44444544  378888873   3322 34334  4456899999999999999   999994333377899999999998


Q ss_pred             CHHH
Q psy10276        116 TQDR  119 (172)
Q Consensus       116 ~~ee  119 (172)
                      ++++
T Consensus        85 ~~~~   88 (142)
T d1w9aa_          85 PPAA   88 (142)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7654

>d1rfea_ b.45.1.1 (A:) Hypothetical protein Rv2991 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Rv2991
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.10  E-value=2e-06  Score=63.24  Aligned_cols=86  Identities=15%  Similarity=0.176  Sum_probs=66.6

Q ss_pred             cchhhHhhhhhcccCccccccc--cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccC---CC
Q psy10276         27 LTRDRFEDLYNREPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPF---WM  101 (172)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~---w~  101 (172)
                      +|.+..+.|.+.. +.+-+++.  +|.|.++-   |.. ..+++.|.|+|...++|.++|..||   +++|++.-   +.
T Consensus         9 m~~~ei~~~L~~~-~~~~LaT~~~dG~P~~~p---v~~-~~~~~~l~~~t~~~s~k~~~l~~np---~v~l~i~~~~~~~   80 (160)
T d1rfea_           9 MSEAEIADFVNSS-RTGTLATIGPDGQPHLTA---MWY-AVIDGEIWLETKAKSQKAVNLRRDP---RVSFLLEDGDTYD   80 (160)
T ss_dssp             CCHHHHHHHHHHC-CCEEEEEECTTSCEEEEE---ECC-EEETTEEEEEEETTSHHHHHHHHCC---EEEEEEEECSSGG
T ss_pred             CCHHHHHHHHccC-CEEEEEEECCCCCEEEEE---EEE-EEcCCEEEEEecCCceEEeeecCCC---eEEEEEEcCCccc
Confidence            4778888888775 56888864  66777762   332 3567889999999999999999999   99999531   23


Q ss_pred             CCceEEEEEeeEEcCHHHH
Q psy10276        102 ASKRVRVEGELEILTQDRF  120 (172)
Q Consensus       102 l~RQVRIeG~vekl~~ees  120 (172)
                      -.+.|.|.|.++.+++.+.
T Consensus        81 ~~~~V~v~G~A~iv~d~~~   99 (160)
T d1rfea_          81 TLRGVSFEGVAEIVEEPEA   99 (160)
T ss_dssp             GCEEEEEEEEEEEECCHHH
T ss_pred             ceeEEEEEEEEEEeCCHHH
Confidence            4578999999999976654

>d2asfa1 b.45.1.1 (A:11-135) Hypothetical protein Rv2074 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Rv2074
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=3.1e-06  Score=61.36  Aligned_cols=74  Identities=11%  Similarity=0.039  Sum_probs=55.2

Q ss_pred             cccCccccccc--cCCCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccCCCCCceEEEEEeeEE
Q psy10276         38 REPLYCKIRAH--LCHPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPFWMASKRVRVEGELEI  114 (172)
Q Consensus        38 ~~~~~~ki~a~--~g~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l~RQVRIeG~vek  114 (172)
                      .+|+-+-+++.  +|.|..+   .|...-..++| +.|.|+..|+|.++|+.||   +|+|++  ..-.+-|.|+|+++.
T Consensus         9 ~~~~~~~LaT~~~dG~P~~~---pv~~~~~~~~~~i~~~t~~~s~K~~~l~~~p---rvsl~v--~d~~~~v~i~G~a~i   80 (125)
T d2asfa1           9 SERHLAMLTTLRADNSPHVV---AVGFTFDPKTHIARVITTGGSQKAVNADRSG---LAVLSQ--VDGARWLSLEGRAAV   80 (125)
T ss_dssp             TSSCCEEEEEECTTSCEEEE---EECCEEETTTTEEEEEEETTCHHHHHHHHHC---EEEEEE--EETTEEEEEEEEEEE
T ss_pred             hcCCEEEEEEECCCCCEEEE---EEEEeeecCCcEEEEEeCCCCeeeeeeecCC---cEEEEE--ECCCcEEEEEEEEEE
Confidence            56777777765  4667665   33333233444 6799999999999999999   999994  345689999999999


Q ss_pred             cCHHH
Q psy10276        115 LTQDR  119 (172)
Q Consensus       115 l~~ee  119 (172)
                      +++.+
T Consensus        81 ~~D~~   85 (125)
T d2asfa1          81 NSDID   85 (125)
T ss_dssp             ECCHH
T ss_pred             eCCHH
Confidence            97544

>d1flma_ b.45.1.1 (A:) FMN-binding protein {Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: FMN-binding protein
species: Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]

Probab=97.34  E-value=4.9e-05  Score=55.05  Aligned_cols=53  Identities=9%  Similarity=-0.074  Sum_probs=45.5

Q ss_pred             eecCCceEEEecCCCchhhccccccccccceeeccC------CCCCceEEEEEeeEEcCHHH
Q psy10276         64 VRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPF------WMASKRVRVEGELEILTQDR  119 (172)
Q Consensus        64 ~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~------w~l~RQVRIeG~vekl~~ee  119 (172)
                      -.|++.+.|.|+..++|.++|.+||   +++|+|.=      |...+.++|.|+++.+++.+
T Consensus        38 v~dd~~i~~~~~~~~~k~~Ni~~np---~V~l~~~~~~~~~~~~~~~~~~v~G~A~i~~dg~   96 (122)
T d1flma_          38 VLDGNRIVVPVGGMHKTEANVARDE---RVLMTLGSRKVAGRNGPGTGFLIRGSAAFRTDGP   96 (122)
T ss_dssp             EETTTEEEEEESSCHHHHHHHHHCC---EEEEEEEEEEEECSSSEEEEEEEEEEEEEESSSH
T ss_pred             EcCCCEEEEEecCCChHHHHHhhCC---cEEEEEEccccccccCCceEEEEEEEEEEecCHH
Confidence            3688999999999999999999999   99999532      23568899999999998765

>d1vl7a_ b.45.1.1 (A:) Hypothetical protein Alr5027 {Cyanobacterium (Nostoc sp. PCC 7120) [TaxId: 103690]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Alr5027
species: Cyanobacterium (Nostoc sp. PCC 7120) [TaxId: 103690]

Probab=97.28  E-value=0.00015  Score=51.65  Aligned_cols=65  Identities=11%  Similarity=0.062  Sum_probs=49.3

Q ss_pred             cccCCCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccC-----CC--CCceEEEEEeeEEcCHH
Q psy10276         47 AHLCHPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPF-----WM--ASKRVRVEGELEILTQD  118 (172)
Q Consensus        47 a~~g~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~-----w~--l~RQVRIeG~vekl~~e  118 (172)
                      ..+|.|.+-.+-+|    .|++| +.|+|...|+|.++|..||   +|+|++.-     +.  ...+|.++|.++.++++
T Consensus        17 ~~dG~P~~s~v~y~----~~~~~~~~~~~s~~s~h~~Ni~~np---~vSl~i~~~~~~~~~~~~~~~v~~~g~~~~i~~~   89 (135)
T d1vl7a_          17 SEQGIPNGSYAPFV----IDDAKNIYIYVSGLAVHTKNIEANP---LVNVLFVDDEAKTNQIFARRRLSFDCTATLIERE   89 (135)
T ss_dssp             CTTSCEEEEEEEEE----ECTTCCEEEEECTTSHHHHHHHHCC---EEEEEEECCGGGCSSGGGCCEEEEEEEEEEECTT
T ss_pred             CCCCCEEEEEEEEE----EcCCCCEEEEecchHHHHHHHHhCC---ceEEEEecCcccccccccceeEEEEEEEEEccCc
Confidence            34677887643344    46555 8899999999999999999   99999521     21  23679999999999754

>d2fg9a1 b.45.1.1 (A:1-157) 5-nitroimidazole resistance protein BT3078 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: 5-nitroimidazole resistance protein BT3078
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.13  E-value=0.00029  Score=51.28  Aligned_cols=83  Identities=10%  Similarity=0.049  Sum_probs=62.9

Q ss_pred             cchhhHhhhhhcccCcccccc--ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC---
Q psy10276         27 LTRDRFEDLYNREPLYCKIRA--HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM---  101 (172)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ki~a--~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~---  101 (172)
                      -++|+.+.+-+..+ -|.++.  .+|.|...    -+.-.++++.+.|.|...++|.+.|..||   +|++++.--.   
T Consensus         7 ~D~~~i~~~L~~~~-~~~Lat~~~dG~P~~~----Pv~f~~~~~~iy~h~~~~~~K~~~l~~np---~V~~~v~~~~~~~   78 (157)
T d2fg9a1           7 EDKQRIESIILQAD-ACFVGITDLEGNPYVV----PMNFGYENDTLYLHSGPEGGKIEMLQRNN---NVCITFSLGHKLV   78 (157)
T ss_dssp             CCHHHHHHHHHHCS-CEEEEEECTTSCEEEE----EECCEEETTEEEEEECSCSHHHHHHHHCC---EEEEEEECCCEEE
T ss_pred             CCHHHHHHHHhcCC-EEEEEEECCCCCEEEE----EEEeeeeCCEEEEEcCCccHHHHHHhcCC---eEEEEEEcCCccc
Confidence            35788888888765 467775  46788765    22334678889999999999999999999   9999842110   


Q ss_pred             ------------CCceEEEEEeeEEcCH
Q psy10276        102 ------------ASKRVRVEGELEILTQ  117 (172)
Q Consensus       102 ------------l~RQVRIeG~vekl~~  117 (172)
                                  .-+.|.|.|+++.+++
T Consensus        79 ~~~~~~~~~~~~~y~sV~v~G~a~~v~d  106 (157)
T d2fg9a1          79 YQHKQVACSYSMRSESAMCRGKVEFIED  106 (157)
T ss_dssp             EEC----CEEEEEEEEEEEEEECEEECS
T ss_pred             cccccccccccccEEEEEEEEEEEEEcC
Confidence                        1267999999999875

>d2htia1 b.45.1.1 (A:10-165) Hypothetical protein BH0577 {Bacillus halodurans [TaxId: 86665]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein BH0577
species: Bacillus halodurans [TaxId: 86665]

Probab=96.32  E-value=0.0023  Score=45.90  Aligned_cols=85  Identities=11%  Similarity=-0.050  Sum_probs=59.7

Q ss_pred             cchhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC----
Q psy10276         27 LTRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM----  101 (172)
Q Consensus        27 ~~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~----  101 (172)
                      -+++..+.+.+.. +-+.++.. +|.|...   -|.. .++++-+.|.|...++|.++|..||   ++++++.-..    
T Consensus         3 ~D~~~i~~~L~~~-~~~~Lat~~~g~P~vv---Pv~f-~~~~~~l~~~~~~~~~k~~~l~~np---~v~~~v~~~~~~~~   74 (156)
T d2htia1           3 KDEKKITEFLNKA-RTGFLGLSTNDQPYVI---PLNF-VWHNHAIYFHGASEGRKIKMIEANP---EVCFTICEDLGTIV   74 (156)
T ss_dssp             CCHHHHHHHHHHC-CCEEEEEEETTEEEEE---EECC-EEETTEEEEEEESSSHHHHHHHHCC---EEEEEEEECC----
T ss_pred             CCHHHHHHHHhcC-CEEEEEEecCCcEEEE---EEEE-EEeCCEEEEecCcchhHHHHHhcCC---eEEEEEEccccccc
Confidence            3566667777644 44666665 3444443   2333 3577889999999999999999999   9999963211    


Q ss_pred             ---------CCceEEEEEeeEEcCHHH
Q psy10276        102 ---------ASKRVRVEGELEILTQDR  119 (172)
Q Consensus       102 ---------l~RQVRIeG~vekl~~ee  119 (172)
                               .-+-|.|.|+++.+++.+
T Consensus        75 ~~~~~~~t~~y~SV~v~G~a~~v~d~e  101 (156)
T d2htia1          75 SPVPAHTDTAYMSVIIFGTIEPVSAIE  101 (156)
T ss_dssp             ---------CEEEEEEEEEEEECCCHH
T ss_pred             ccCcccccccEEEEEEEEEEEEeCCHH
Confidence                     125699999999998754

>d2hq9a1 b.45.1.1 (A:1-148) Hypothetical protein Mll6688 {Mesorhizobium loti [TaxId: 381]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Mll6688
species: Mesorhizobium loti [TaxId: 381]

Probab=96.25  E-value=0.0017  Score=46.70  Aligned_cols=85  Identities=12%  Similarity=0.036  Sum_probs=60.9

Q ss_pred             ceecchhhHhhhhhcccCcccccc-ccCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC-
Q psy10276         24 LEILTRDRFEDLYNREPLYCKIRA-HLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-  101 (172)
Q Consensus        24 ~e~~~~~~~~~~~~~~~~~~ki~a-~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-  101 (172)
                      +..+|.+..+.+.+.. .-+.|+. .+|.|...-+-+    .++++-+.|.|. .++|..+|+.||   +||++..-.. 
T Consensus         3 ~r~ls~~E~~~~L~~~-~~g~Lat~~~g~P~v~Pv~f----~~~~~~iy~~t~-~~~K~~~l~~np---~Vs~~v~~~~~   73 (148)
T d2hq9a1           3 VRTLSALECTKVLTAN-RVGRLACAKDGQPYVVPLYY----AYSDAHLYAFSM-PGKKIEWMRANP---RVSVQVDEHGQ   73 (148)
T ss_dssp             EEECCHHHHHHHHHHC-CEEEEEEEETTEEEEEEEEC----EEETTEEEEEEC-SSHHHHHHHHCC---EEEEEEEEECS
T ss_pred             cccCCHHHHHHHHhcC-CEEEEEEEeCCcEEEEEEEE----EEECCEEEEEeC-chHHHHHHhCCC---eEEEEEEeccc
Confidence            3568888999998875 4566776 345555552222    256667777785 578999999999   9999953222 


Q ss_pred             --CCceEEEEEeeEEcCH
Q psy10276        102 --ASKRVRVEGELEILTQ  117 (172)
Q Consensus       102 --l~RQVRIeG~vekl~~  117 (172)
                        --|-|.|.|+++.+++
T Consensus        74 ~~~~~sV~v~G~a~~v~d   91 (148)
T d2hq9a1          74 GRGWKSVVVDGRYEELPD   91 (148)
T ss_dssp             TTCEEEEEEEEEEEECCS
T ss_pred             cceeEEEEEEEEEEEEeC
Confidence              3467999999999975

>d2arza1 b.45.1.1 (A:2-239) Hypothetical protein PA4388 {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein PA4388
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.57  E-value=0.013  Score=45.73  Aligned_cols=75  Identities=15%  Similarity=0.041  Sum_probs=57.9

Q ss_pred             CCCCceeeEEEEeeeecCCc-eEEEecCCCchhhccccccccccceeeccCCC-----CCceEEEEEeeEEcCHHHHH--
Q psy10276         50 CHPSSRLFRFLFLHVRVEGE-LEILTRDRFEDLYNREPLYCKIRAHLCHPFWM-----ASKRVRVEGELEILTQDRFE--  121 (172)
Q Consensus        50 g~PSsRi~R~VLLK~~de~G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~-----l~RQVRIeG~vekl~~eesd--  121 (172)
                      |.|.+-++-++    .|++| +.||...-|.+.++|..||   +++|++...+     ....+.+.|.++++++++-+  
T Consensus        29 G~P~~S~v~~a----~d~~G~p~~~~S~la~Ht~NL~~d~---rvSL~v~~~~~~~~~~~~R~tl~g~~~~~~~~e~~~~  101 (238)
T d2arza1          29 GFPFGSVVPYC----LDAEGRPLILISRIAQHTHNLQADP---RCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAA  101 (238)
T ss_dssp             TCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCC---EEEEEEECTTCSSTTSSCEEEEEEEEEECCHHHHHHH
T ss_pred             CCceEEEEEEE----ECCCCCEEEEEecchHhhHhhhcCC---cEEEEEEcCCccccccccceeeeeeeEecCchHHHHH
Confidence            77876654454    35544 8899999999999999999   9999964332     33579999999999998654  


Q ss_pred             --HHHhhCCCCC
Q psy10276        122 --DLYNREPLYC  131 (172)
Q Consensus       122 --~YF~sRPr~S  131 (172)
                        .|++..|...
T Consensus       102 ~~~~~~rhP~~~  113 (238)
T d2arza1         102 AERYYRYFPESA  113 (238)
T ss_dssp             HHHHHHHCGGGT
T ss_pred             HHHHHHhccchh
Confidence              7888888553

>d2fura1 b.45.1.1 (A:16-208) Hypothetical protein Ta1372 {Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypothetical protein Ta1372
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=91.20  E-value=0.062  Score=41.26  Aligned_cols=86  Identities=5%  Similarity=-0.093  Sum_probs=60.9

Q ss_pred             ecchhhHhhhhhcccCccccccc-cCCCCceeeEEEEeeeecCCceEEEecCCCchhhccccccccccceeeccCCC---
Q psy10276         26 ILTRDRFEDLYNREPLYCKIRAH-LCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLYNREPLYCKIRAHLCHPFWM---  101 (172)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ki~a~-~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~---  101 (172)
                      ..++|..+.+-+. ..-+.||.. ++.|-..    -+.=.++++-+-|.+...++|...|..||   ++++++.--.   
T Consensus         3 ~~d~eei~~iL~~-~~~~~la~~~~g~Pyvv----P~~f~~~~~~ly~H~a~~g~k~~~l~~np---~V~~~v~~~~~~v   74 (193)
T d2fura1           3 SYSDEDLVAMLDR-NFTCTVSFIDGGIPYAI----PMMLASEGKTIYLHGSMKSRIYGILKTGQ---LIAISLLEINGIV   74 (193)
T ss_dssp             ECCHHHHHHHHHH-CSEEEEEEEETTEEEEE----EEECEEETTEEEEEEETTSHHHHHHHTTC---CEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHhh-CCEEEEEEeeCCeEEEE----EEEEEEeCCEEEEEecCcchHHHHhhcCC---cEEEEEEecceee
Confidence            4567777777776 445666644 3445443    23334677788889999999999999999   9999853211   


Q ss_pred             ----------CCceEEEEEeeEEcCHHH
Q psy10276        102 ----------ASKRVRVEGELEILTQDR  119 (172)
Q Consensus       102 ----------l~RQVRIeG~vekl~~ee  119 (172)
                                --|.|.+.|+++.+++++
T Consensus        75 ~~~~~~~~t~~YrSViv~G~a~~v~d~e  102 (193)
T d2fura1          75 LAKEIKNNSINYVSALIFGRPYEIDDTE  102 (193)
T ss_dssp             ECSBGGGCEEEEEEEEEEECCEECCCHH
T ss_pred             cCCCcCccceEEEEEEEEEEEEEecCHH
Confidence                      238999999999887654

>d1xhna1 b.45.1.1 (A:13-182) Cellular repressor of E1A-stimulated genes CREG1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Cellular repressor of E1A-stimulated genes CREG1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.06  E-value=0.27  Score=36.68  Aligned_cols=61  Identities=11%  Similarity=0.102  Sum_probs=46.5

Q ss_pred             CCce-EEEecCCCchhhccccccccccceeeccCCCC--------------CceEEEEEeeEEcCHHHH----HHHHhhC
Q psy10276         67 EGEL-EILTRDRFEDLYNREPLYCKIRAHLCHPFWMA--------------SKRVRVEGELEILTQDRF----EDLYNRE  127 (172)
Q Consensus        67 e~Gf-~F~Tn~~S~Kg~eL~~nP~~~~AAL~F~~w~l--------------~RQVRIeG~vekl~~ees----d~YF~sR  127 (172)
                      ..|. .||-..-+.-.++|..||   +++|++.....              .-.|.+.|.+++++++|.    ++|+..-
T Consensus        51 ~~G~P~~llS~la~ht~Nl~~~~---~vSL~v~~~~~~~~~~~~~dp~~p~~aRlTl~G~~~~v~~~e~~~a~~~yl~rH  127 (170)
T d1xhna1          51 GSGVPYFYLSPLQLSVSNLQENP---YATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEMDIAKHSLFIRH  127 (170)
T ss_dssp             CCSCCEEEECTTSHHHHHHHHCC---EEEEEEEGGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCGGGHHHHHHHHHHHC
T ss_pred             CCCCEEEEEcChhHhHHHHhhCC---CeEEEEEecCCCcccccCCCccCCCCcEEEEEEEEEECCcHHHHHHHHHHHHHH
Confidence            3454 688888889999999999   99999532211              124999999999998875    4688888


Q ss_pred             CCC
Q psy10276        128 PLY  130 (172)
Q Consensus       128 Pr~  130 (172)
                      |..
T Consensus       128 P~a  130 (170)
T d1xhna1         128 PEM  130 (170)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            764

>d2vpaa1 b.45.1.1 (A:2-195) NimA-related protein DR0842 {Deinococcus radiodurans [TaxId: 1299]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: NimA-related protein DR0842
species: Deinococcus radiodurans [TaxId: 1299]

Probab=87.52  E-value=0.36  Score=36.34  Aligned_cols=89  Identities=13%  Similarity=-0.036  Sum_probs=55.9

Q ss_pred             ecchhhHhhhhhcccCcccccc-ccCC-----CCceeeEEEEeeeecCC-c-eEEEecCCCchhhccccccccccceeec
Q psy10276         26 ILTRDRFEDLYNREPLYCKIRA-HLCH-----PSSRLFRFLFLHVRVEG-E-LEILTRDRFEDLYNREPLYCKIRAHLCH   97 (172)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~ki~a-~~g~-----PSsRi~R~VLLK~~de~-G-f~F~Tn~~S~Kg~eL~~nP~~~~AAL~F   97 (172)
                      .+|+|+...+.++-. .+.++. .+|.     |-..    =+.=.++.+ | |-|-+...++|.+.|..||   ++++++
T Consensus        20 ~~~de~i~~~L~~~~-~~~la~~~~g~~~~~~Py~v----Pl~f~~~~~~~~ly~H~a~~g~k~~~l~~~~---~v~~~v   91 (194)
T d2vpaa1          20 RQSDEWIRELLLRGT-IARVATLWQGEDGAAFPFIT----PLAYAYRPEQGDLVYHTNVVGRLRANAGQGH---PATLEV   91 (194)
T ss_dssp             BCCHHHHHHHHHHCC-EEEEEEEEECTTSCEEEEEE----EEECEEETTTTEEEEECCCCCSSBSSCSSEE---EEEEEE
T ss_pred             ccCHHHHHHHHhhCC-EEEEEEecCCCCCCCCCEEE----eEEeEEecCCCEEEEEecCccHHHHHHhcCC---ceEEEE
Confidence            356666666666543 233443 2332     3332    111124433 3 5566667899999999999   999985


Q ss_pred             cCC------------C-CCceEEEEEeeEEcCHHHHHH
Q psy10276         98 PFW------------M-ASKRVRVEGELEILTQDRFED  122 (172)
Q Consensus        98 ~~w------------~-l~RQVRIeG~vekl~~eesd~  122 (172)
                      ..-            . --|.|.+.|+++.|+++|-..
T Consensus        92 ~~~~~~v~~~~~~~~t~~Y~SVi~~G~a~~v~d~e~~~  129 (194)
T d2vpaa1          92 SEIGQFLPSNSPLELSVQYRSVMVFGTARVLAGEDARA  129 (194)
T ss_dssp             EEEEEEECCSSGGGCEEEEEEEEEEEEEEECCHHHHHH
T ss_pred             EeccEEecCCCcCccCceEEEEEEEEEEEEcCCHHHHH
Confidence            421            1 257999999999999887543

>d2hq7a1 b.45.1.1 (A:2-142) Hypotheical protein CAC3491 {Clostridium acetobutylicum [TaxId: 1488]}

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: Hypotheical protein CAC3491
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=81.90  E-value=0.38  Score=33.76  Aligned_cols=67  Identities=16%  Similarity=0.128  Sum_probs=40.0

Q ss_pred             hheeccee----eeeeeccceecch-hhHhhhhhcccCccccccccCCCCceeeEEEEeeeecCCceEEEecCCCchhh
Q psy10276          9 ASVLFFFK----NVRVEGELEILTR-DRFEDLYNREPLYCKIRAHLCHPSSRLFRFLFLHVRVEGELEILTRDRFEDLY   82 (172)
Q Consensus         9 ~~~~f~~~----~vrveg~~e~~~~-~~~~~~~~~~~~~~ki~a~~g~PSsRi~R~VLLK~~de~Gf~F~Tn~~S~Kg~   82 (172)
                      ++|.|.+.    +|+|+|..++++. +..+++++.-   .+-=-..|+.+..   ++||+ ++..-..++.|..|..++
T Consensus        66 vsl~~~~~~~~~~v~i~G~a~i~~d~~~~~~~w~~~---~~~~~p~g~~dp~---~~llr-i~P~~~~~w~~~~~~~f~  137 (141)
T d2hq7a1          66 ICLYFVDDNKFAGLMLVGTIEILHDRASKEMLWTDG---CEIYYPLGIDDPD---YTALC-FTAEWGNYYRHLKNITFK  137 (141)
T ss_dssp             EEEEEECSSSSEEEEEEEEEEEECCHHHHHHHCCTT---HHHHCTTGGGCTT---EEEEE-EEEEEEEEEETTEEEEEE
T ss_pred             cEEEEecCCCceEEEEEEEEEEEcCHHHHHHHHHHH---HHHhccCCCCCCC---EEEEE-EEEeEEEEEcccCccceE
Confidence            45666553    8999999999984 4445555421   1110012222333   35666 466788899999887664