Psyllid ID: psy10302

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKY
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHccHHHHHHHHHccccHHHHHHHcccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccc
Coil and Loop (DISEMBL)
matidgrptqyGITLRQLRELMEVRGREGIAkineyggvpEICKKLytspneglggsqtdlehrrevfgsniippkpskTFLQLVWEALQDVTLIILEIAALVSLGlsfyhpggesehdneetky
Flexible Loop (DISEMBL)
matidgrptqygitlrqLRELMEVRGREGIakineyggvpEICKKLYTSPNEGLGGSQTDLEHRREVFgsniippkpSKTFLQLVWEALQDVTLIILEIAALVSLGLSFyhpggesehdneetky
Low Complexity Region (SEG)
MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKY
Disordered region (IsUnstruct)
**********YGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYT******************VFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYH**************
Disordered Region (DISOPRED)
******RPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGG***********
Disordered Region (DISEMBL)
MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP*************
Disordered Region (DISPRO)
*********QYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHDNEETKY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
P58165	1112	Plasma membrane calcium-t	N/A	N/A	0.848	0.095	0.691	2e-38
Q64568	1258	Plasma membrane calcium-t	yes	N/A	0.84	0.083	0.650	4e-34
P20020	1258	Plasma membrane calcium-t	yes	N/A	0.816	0.081	0.699	5e-34
P11505	1258	Plasma membrane calcium-t	yes	N/A	0.816	0.081	0.699	5e-34
Q16720	1220	Plasma membrane calcium-t	no	N/A	0.84	0.086	0.650	6e-34
Q00804	1249	Plasma membrane calcium-t	no	N/A	0.816	0.081	0.689	1e-32
P23220	1220	Plasma membrane calcium-t	no	N/A	0.816	0.083	0.660	7e-32
Q9R0K7	1198	Plasma membrane calcium-t	no	N/A	0.856	0.089	0.657	3e-30
P11506	1243	Plasma membrane calcium-t	no	N/A	0.856	0.086	0.648	6e-30
Q01814	1243	Plasma membrane calcium-t	no	N/A	0.848	0.085	0.654	8e-30

>sp|P58165|AT2B2_OREMO Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 89/107 (83%), Gaps = 1/107 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +G +L +LR LME+RG E + K+ E YGGV  +CK+L TSP EGL G+QTDL+ R+E+FG
Sbjct: 24  FGCSLMELRSLMELRGTEAVVKLQEDYGGVEGLCKRLKTSPTEGLAGAQTDLDKRKEIFG 83

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
            N+IPPK  KTFLQLVWEALQDVTLIILEIAAL+SLGLSFYHP GE+
Sbjct: 84  KNLIPPKKPKTFLQLVWEALQDVTLIILEIAALISLGLSFYHPPGET 130

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.
Oreochromis mossambicus (taxid: 8127)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8

>sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +G TL +LR LME+RG E + KI E YG V  +C++L TSP EGL  +  DLE RR+++G
Sbjct: 27  FGCTLAELRSLMELRGAEALQKIQEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG 86

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115
            N IPPK  KTFLQLVWEALQDVTLIILE+AA+VSLGLSFY P GE
Sbjct: 87  QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGE 132

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3

 Score =  142 bits (359), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +GITL +LR LME+R  + + KI E YG V  IC KL TSPNEGL G+  DLE R  VFG
Sbjct: 27  FGITLAELRALMELRSTDALRKIQESYGDVYGICTKLKTSPNEGLSGNPADLERREAVFG 86

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP 112
            N IPPK  KTFLQLVWEALQDVTLIILEIAA+VSLGLSFY P
Sbjct: 87  KNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP 129

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2

 Score =  142 bits (359), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +GITL +LR LME+R  + + KI E YG V  IC KL TSPNEGL G+  DLE R  VFG
Sbjct: 27  FGITLAELRALMELRSTDALRKIQESYGDVYGICTKLKTSPNEGLSGNPADLERREAVFG 86

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP 112
            N IPPK  KTFLQLVWEALQDVTLIILEIAA+VSLGLSFY P
Sbjct: 87  KNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP 129

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3

 Score =  142 bits (358), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +G TL +LR LME+RG E + KI E YG V  +C++L TSP EGL  +  DLE RR+++G
Sbjct: 27  FGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGLADNTNDLEKRRQIYG 86

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115
            N IPPK  KTFLQLVWEALQDVTLIILE+AA+VSLGLSFY P GE
Sbjct: 87  QNFIPPKQPKTFLQLVWEALQDVTLIILEVAAIVSLGLSFYAPPGE 132

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q00804|AT2B1_RABIT Plasma membrane calcium-transporting ATPase 1 OS=Oryctolagus cuniculus GN=ATP2B1 PE=2 SV=2

 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/103 (68%), Positives = 78/103 (75%), Gaps = 1/103 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +GITL  +R LME+R  + + KI E YG V  IC KL TSPNEGL G+  DLE R  VFG
Sbjct: 27  FGITLAAVRALMELRSTDALRKILESYGDVYGICTKLKTSPNEGLRGNPADLERREAVFG 86

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP 112
            N IPPK  KTFLQLVWEALQDVTLIILEIAA+VSLGLSFY P
Sbjct: 87  KNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP 129

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Oryctolagus cuniculus (taxid: 9986)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P23220|AT2B1_PIG Plasma membrane calcium-transporting ATPase 1 OS=Sus scrofa GN=ATP2B1 PE=2 SV=1

 Score =  135 bits (340), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 77/103 (74%), Gaps = 1/103 (0%)

Query: 11  YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
           +GITL  +R LME+R  + + KI E YG V  IC +L TSP EGL G+  D+E R  VFG
Sbjct: 27  FGITLADVRALMELRSTDALRKIQESYGDVYGICTRLKTSPVEGLSGNPADIERREAVFG 86

Query: 70  SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP 112
            N IPPK  KTFLQLVWEALQDVTLIILEIAA+VSLGLSFY P
Sbjct: 87  KNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYQP 129

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/108 (65%), Positives = 85/108 (78%), Gaps = 1/108 (0%)

Query: 10  QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
           ++G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct: 23  EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query: 69  GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
           G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct: 83  GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Plays a role in maintaining balance and hearing.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2

 Score =  129 bits (324), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/108 (64%), Positives = 85/108 (78%), Gaps = 1/108 (0%)

Query: 10  QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
           ++G ++ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct: 23  EFGCSMEELRSLMELRGTEAVVKIKETYGDTESICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query: 69  GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
           G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct: 83  GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2

 Score =  128 bits (322), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 84/107 (78%), Gaps = 1/107 (0%)

Query: 10  QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
           ++G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct: 23  EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query: 69  GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115
           G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GE
Sbjct: 83  GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGE 129

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
383859188	1172	PREDICTED: plasma membrane calcium-trans	1.0	0.106	0.789	3e-54
383859192	1176	PREDICTED: plasma membrane calcium-trans	1.0	0.106	0.789	3e-54
383859186	1194	PREDICTED: plasma membrane calcium-trans	1.0	0.104	0.789	3e-54
383859194	1199	PREDICTED: plasma membrane calcium-trans	1.0	0.104	0.789	3e-54
383859190	1108	PREDICTED: plasma membrane calcium-trans	1.0	0.112	0.789	4e-54
380018752	1189	PREDICTED: plasma membrane calcium-trans	1.0	0.105	0.765	3e-53
328783833	1186	PREDICTED: plasma membrane calcium-trans	1.0	0.105	0.765	3e-53
307174641	1270	Plasma membrane calcium-transporting ATP	1.0	0.098	0.771	1e-52
332020943	1174	Plasma membrane calcium-transporting ATP	1.0	0.106	0.753	6e-52
350411677	1193	PREDICTED: plasma membrane calcium-trans	1.0	0.104	0.765	1e-51

>gi|383859188|ref|XP_003705078.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 2 [Megachile rotundata]

 Score =  215 bits (547), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  E E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120

Query: 119 -DNEETKY 125
            D++E KY
Sbjct: 121 IDDDEAKY 128

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859192|ref|XP_003705080.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 4 [Megachile rotundata]

 Score =  215 bits (547), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  E E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120

Query: 119 -DNEETKY 125
            D++E KY
Sbjct: 121 IDDDEAKY 128

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859186|ref|XP_003705077.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 1 [Megachile rotundata]

 Score =  215 bits (547), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  E E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120

Query: 119 -DNEETKY 125
            D++E KY
Sbjct: 121 IDDDEAKY 128

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859194|ref|XP_003705081.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 5 [Megachile rotundata]

 Score =  215 bits (547), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  E E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120

Query: 119 -DNEETKY 125
            D++E KY
Sbjct: 121 IDDDEAKY 128

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859190|ref|XP_003705079.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 3 [Megachile rotundata]

 Score =  215 bits (547), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYGITL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGITLKQLRELMELRGREGVNKINSYGGVQEICKKLYTSPNEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  E E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPSDEEEQPS 120

Query: 119 -DNEETKY 125
            D++E KY
Sbjct: 121 IDDDEAKY 128

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380018752|ref|XP_003693287.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis florea]

 Score =  211 bits (538), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 98/128 (76%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRPTQYGI+L+QLRELME+RGREG+ K+N YGGV EICKKLYTSP+EGL GS  D
Sbjct: 1   MATIDGRPTQYGISLKQLRELMELRGREGVTKVNSYGGVQEICKKLYTSPSEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  + E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPADDEEKPL 120

Query: 119 -DNEETKY 125
            D +E KY
Sbjct: 121 IDEDEAKY 128

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783833|ref|XP_003250350.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis mellifera]

 Score =  211 bits (538), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 98/128 (76%), Positives = 111/128 (86%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRPTQYGI+L+QLRELME+RGREG+ K+N YGGV EICKKLYTSP+EGL GS  D
Sbjct: 1   MATIDGRPTQYGISLKQLRELMELRGREGVTKVNSYGGVQEICKKLYTSPSEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  + E   
Sbjct: 61  IQHRRDTFGSNLIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPADDEEKPL 120

Query: 119 -DNEETKY 125
            D +E KY
Sbjct: 121 IDEDEAKY 128

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307174641|gb|EFN65040.1| Plasma membrane calcium-transporting ATPase 3 [Camponotus floridanus]

 Score =  209 bits (533), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/127 (77%), Positives = 111/127 (87%), Gaps = 2/127 (1%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYG+TL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGVTLKQLRELMELRGREGVNKINGYGGVQEICKKLYTSPNEGLSGSVAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESE--H 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFYHP  + +   
Sbjct: 61  IQHRRDTFGSNMIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYHPADDEKPLV 120

Query: 119 DNEETKY 125
           D++E KY
Sbjct: 121 DDDEAKY 127

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020943|gb|EGI61337.1| Plasma membrane calcium-transporting ATPase 3 [Acromyrmex echinatior]

 Score =  207 bits (527), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 98/130 (75%), Positives = 109/130 (83%), Gaps = 5/130 (3%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRP QYG+TL+QLRELME+RGREG+ KIN YGGV EICKKLYTSPNEGL GS  D
Sbjct: 1   MATIDGRPAQYGVTLKQLRELMELRGREGVNKINGYGGVQEICKKLYTSPNEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN+IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFY P  + E   
Sbjct: 61  IQHRRDTFGSNMIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYQPADDEEKEV 120

Query: 119 ---DNEETKY 125
              D +E KY
Sbjct: 121 VSVDEDEAKY 130

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411677|ref|XP_003489420.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus impatiens]

 Score =  206 bits (524), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 98/128 (76%), Positives = 110/128 (85%), Gaps = 3/128 (2%)

Query: 1   MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
           MATIDGRPTQYGITL+QLRELME+RGREG+ KI+ YGGV EICKKLYTSP+EGL GS  D
Sbjct: 1   MATIDGRPTQYGITLKQLRELMELRGREGVNKISSYGGVQEICKKLYTSPSEGLSGSAAD 60

Query: 61  LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEH-- 118
           ++HRR+ FGSN IPPKP KTFLQLVWEALQDVTLIILE+AALVSLGLSFY P  + E   
Sbjct: 61  IQHRRDTFGSNQIPPKPPKTFLQLVWEALQDVTLIILEVAALVSLGLSFYQPADDEERPL 120

Query: 119 -DNEETKY 125
            D +E+KY
Sbjct: 121 IDEDESKY 128

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
FB|FBgn0259214	1255	PMCA "plasma membrane calcium	0.92	0.091	0.8	2.3e-44
UNIPROTKB|E1C784	1208	ATP2B4 "Uncharacterized protei	0.856	0.088	0.669	1.4e-33
UNIPROTKB|E1C785	1247	ATP2B4 "Uncharacterized protei	0.856	0.085	0.669	1.4e-33
UNIPROTKB|F1SQA7	334	ATP2B2 "Uncharacterized protei	0.848	0.317	0.654	2e-33
UNIPROTKB|J9PB54	954	ATP2B2 "Uncharacterized protei	0.856	0.112	0.657	7.9e-33
ZFIN|ZDB-GENE-061016-1	1253	atp2b2 "ATPase, Ca++ transport	0.872	0.086	0.663	8.1e-33
UNIPROTKB|F1MN60	1198	ATP2B2 "Uncharacterized protei	0.856	0.089	0.657	1.2e-32
MGI|MGI:105368	1198	Atp2b2 "ATPase, Ca++ transport	0.856	0.089	0.657	1.2e-32
UNIPROTKB|E2RF35	1243	ATP2B2 "Uncharacterized protei	0.856	0.086	0.657	1.3e-32
UNIPROTKB|D4AEN5	1189	Atp2b2 "Plasma membrane calciu	0.856	0.089	0.648	2.5e-32

FB|FBgn0259214 PMCA "plasma membrane calcium ATPase" [Drosophila melanogaster (taxid:7227)]

 Score = 479 (173.7 bits), Expect = 2.3e-44, P = 2.3e-44
 Identities = 92/115 (80%), Positives = 100/115 (86%)

Query:     1 MATIDGRPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTD 60
             MATIDGRP QYGI+L+QLRELME RGREG+ KI E GG+ E+CKKLYTSPNEGL GS+ D
Sbjct:     1 MATIDGRPAQYGISLKQLRELMEHRGREGVMKIAENGGIHELCKKLYTSPNEGLSGSKAD 60

Query:    61 LEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGE 115
              EHRRE FGSN+IPPKP KTFL LVWEALQDVTLIILE+AALVSLGLSFY P  E
Sbjct:    61 EEHRRETFGSNVIPPKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADE 115

GO:0005388 "calcium-transporting ATPase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

UNIPROTKB|E1C784 ATP2B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 378 (138.1 bits), Expect = 1.4e-33, P = 1.4e-33
 Identities = 73/109 (66%), Positives = 91/109 (83%)

Query:    11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
             +G ++ +LR LME+R  E +A+I++ YGGV  +CK+L TSP EGL G+ TDLE RR+VFG
Sbjct:    23 FGCSMVELRNLMELRSAEAVARISDSYGGVQTVCKRLKTSPVEGLSGNPTDLEKRRQVFG 82

Query:    70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP-GGESE 117
              N IPPK +KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GG++E
Sbjct:    83 QNFIPPKKAKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGGDNE 131

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1C785 ATP2B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 378 (138.1 bits), Expect = 1.4e-33, P = 1.4e-33
 Identities = 73/109 (66%), Positives = 91/109 (83%)

Query:    11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
             +G ++ +LR LME+R  E +A+I++ YGGV  +CK+L TSP EGL G+ TDLE RR+VFG
Sbjct:    23 FGCSMVELRNLMELRSAEAVARISDSYGGVQTVCKRLKTSPVEGLSGNPTDLEKRRQVFG 82

Query:    70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP-GGESE 117
              N IPPK +KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GG++E
Sbjct:    83 QNFIPPKKAKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGGDNE 131

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SQA7 ATP2B2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 70/107 (65%), Positives = 84/107 (78%)

Query:    11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
             +G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++FG
Sbjct:    24 FGCTMEELRSLMELRGTEAVVKIKETYGDTDAICRRLKTSPVEGLPGTAPDLEKRKQIFG 83

Query:    70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
              N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GE+
Sbjct:    84 QNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGEN 130

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

UNIPROTKB|J9PB54 ATP2B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 369 (135.0 bits), Expect = 7.9e-33, P = 7.9e-33
 Identities = 71/108 (65%), Positives = 85/108 (78%)

Query:    10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
             ++G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct:    23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query:    69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
             G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct:    83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

ZFIN|ZDB-GENE-061016-1 atp2b2 "ATPase, Ca++ transporting, plasma membrane 2" [Danio rerio (taxid:7955)]

 Score = 371 (135.7 bits), Expect = 8.1e-33, P = 8.1e-33
 Identities = 73/110 (66%), Positives = 85/110 (77%)

Query:    11 YGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFG 69
             +G +L +LR LME+RG E + KI E YGG   +C++L TSP EGL G  TDL+ R+EVFG
Sbjct:    21 FGCSLMELRSLMELRGTEAVVKIQEDYGGTEGLCQRLKTSPTEGLAGLATDLDKRKEVFG 80

Query:    70 SNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGESEHD 119
              N+IPPK  KTFLQLVWEALQDVTLIILEIAAL+SLGLSFY P GE   D
Sbjct:    81 RNLIPPKKPKTFLQLVWEALQDVTLIILEIAALISLGLSFYQPPGEGNTD 130

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030182 "neuron differentiation" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

UNIPROTKB|F1MN60 ATP2B2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 369 (135.0 bits), Expect = 1.2e-32, P = 1.2e-32
 Identities = 71/108 (65%), Positives = 85/108 (78%)

Query:    10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
             ++G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct:    23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTDAICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query:    69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
             G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct:    83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

GO:0090102 "cochlea development" evidence=IEA

GO:0060088 "auditory receptor cell stereocilium organization" evidence=IEA

GO:0051928 "positive regulation of calcium ion transport" evidence=IEA

GO:0051480 "cytosolic calcium ion homeostasis" evidence=IEA

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=IEA

GO:0050885 "neuromuscular process controlling balance" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0048167 "regulation of synaptic plasticity" evidence=IEA

GO:0046068 "cGMP metabolic process" evidence=IEA

GO:0045299 "otolith mineralization" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0042428 "serotonin metabolic process" evidence=IEA

GO:0040011 "locomotion" evidence=IEA

GO:0030899 "calcium-dependent ATPase activity" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IEA

GO:0021707 "cerebellar granule cell differentiation" evidence=IEA

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0008361 "regulation of cell size" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0007595 "lactation" evidence=IEA

GO:0006996 "organelle organization" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

MGI|MGI:105368 Atp2b2 "ATPase, Ca++ transporting, plasma membrane 2" [Mus musculus (taxid:10090)]

 Score = 369 (135.0 bits), Expect = 1.2e-32, P = 1.2e-32
 Identities = 71/108 (65%), Positives = 85/108 (78%)

Query:    10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
             ++G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct:    23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query:    69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
             G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct:    83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0005388 "calcium-transporting ATPase activity" evidence=ISO

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005516 "calmodulin binding" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005929 "cilium" evidence=IDA

GO:0006200 "ATP catabolic process" evidence=IMP

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=ISO;IMP

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0006996 "organelle organization" evidence=IMP

GO:0007595 "lactation" evidence=IMP

GO:0007605 "sensory perception of sound" evidence=ISO;IGI;IMP

GO:0007626 "locomotory behavior" evidence=IMP

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0008361 "regulation of cell size" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO;IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0021549 "cerebellum development" evidence=IMP

GO:0021692 "cerebellar Purkinje cell layer morphogenesis" evidence=IMP

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IMP

GO:0021707 "cerebellar granule cell differentiation" evidence=IMP

GO:0030165 "PDZ domain binding" evidence=ISO

GO:0030182 "neuron differentiation" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0030899 "calcium-dependent ATPase activity" evidence=IMP

GO:0032809 "neuronal cell body membrane" evidence=ISO

GO:0033130 "acetylcholine receptor binding" evidence=ISO

GO:0034220 "ion transmembrane transport" evidence=IEA

GO:0035254 "glutamate receptor binding" evidence=ISO

GO:0040011 "locomotion" evidence=IMP

GO:0042428 "serotonin metabolic process" evidence=IMP

GO:0042472 "inner ear morphogenesis" evidence=IMP

GO:0043025 "neuronal cell body" evidence=ISO;IDA

GO:0045121 "membrane raft" evidence=ISO

GO:0045299 "otolith mineralization" evidence=IMP

GO:0046068 "cGMP metabolic process" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048167 "regulation of synaptic plasticity" evidence=IMP

GO:0048839 "inner ear development" evidence=IMP

GO:0050808 "synapse organization" evidence=IMP

GO:0050885 "neuromuscular process controlling balance" evidence=IMP

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=IMP

GO:0051480 "cytosolic calcium ion homeostasis" evidence=ISO;IMP

GO:0051928 "positive regulation of calcium ion transport" evidence=IMP

GO:0055085 "transmembrane transport" evidence=IEA

GO:0060088 "auditory receptor cell stereocilium organization" evidence=IMP

GO:0060113 "inner ear receptor cell differentiation" evidence=IMP

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0090102 "cochlea development" evidence=IMP

GO:1901660 "calcium ion export" evidence=ISO

UNIPROTKB|E2RF35 ATP2B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 369 (135.0 bits), Expect = 1.3e-32, P = 1.3e-32
 Identities = 71/108 (65%), Positives = 85/108 (78%)

Query:    10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
             ++G T+ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct:    23 EFGCTMEELRSLMELRGTEAVVKIKETYGDTEAICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query:    69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
             G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct:    83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

GO:0090102 "cochlea development" evidence=IEA

GO:0060088 "auditory receptor cell stereocilium organization" evidence=IEA

GO:0051928 "positive regulation of calcium ion transport" evidence=IEA

GO:0051480 "cytosolic calcium ion homeostasis" evidence=IEA

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=IEA

GO:0050885 "neuromuscular process controlling balance" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0048167 "regulation of synaptic plasticity" evidence=IEA

GO:0046068 "cGMP metabolic process" evidence=IEA

GO:0045299 "otolith mineralization" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0042428 "serotonin metabolic process" evidence=IEA

GO:0040011 "locomotion" evidence=IEA

GO:0030899 "calcium-dependent ATPase activity" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IEA

GO:0021707 "cerebellar granule cell differentiation" evidence=IEA

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0008361 "regulation of cell size" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0007595 "lactation" evidence=IEA

GO:0006996 "organelle organization" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

UNIPROTKB|D4AEN5 Atp2b2 "Plasma membrane calcium-transporting ATPase 2" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 2.5e-32, P = 2.5e-32
 Identities = 70/108 (64%), Positives = 85/108 (78%)

Query:    10 QYGITLRQLRELMEVRGREGIAKINE-YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVF 68
             ++G ++ +LR LME+RG E + KI E YG    IC++L TSP EGL G+  DLE R+++F
Sbjct:    23 EFGCSMEELRSLMELRGTEAVVKIKETYGDTESICRRLKTSPVEGLPGTAPDLEKRKQIF 82

Query:    69 GSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
             G N IPPK  KTFLQLVWEALQDVTLIILEIAA++SLGLSFYHP GES
Sbjct:    83 GQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYHPPGES 130

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q64568	AT2B3_RAT	3, ., 6, ., 3, ., 8	0.6509	0.84	0.0834	yes	N/A
P11505	AT2B1_RAT	3, ., 6, ., 3, ., 8	0.6990	0.816	0.0810	yes	N/A
P20020	AT2B1_HUMAN	3, ., 6, ., 3, ., 8	0.6990	0.816	0.0810	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	125
TIGR01517	944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	2e-30
pfam00690	69	pfam00690, Cation_ATPase_N, Cation transporter/ATP	2e-17
smart00831	75	smart00831, Cation_ATPase_N, Cation transporter/AT	8e-13
COG0474	917	COG0474, MgtA, Cation transport ATPase [Inorganic	9e-08

>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase

 Score =  113 bits (285), Expect = 2e-30
 Identities = 40/84 (47%), Positives = 51/84 (60%)

Query: 35  EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTL 94
           + GG   I  KL T  NEG+  S + LE R +V+G N +P KP K+FLQ+VW AL D TL
Sbjct: 41  KLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTL 100

Query: 95  IILEIAALVSLGLSFYHPGGESEH 118
           I+L +AA+VSL L    PG     
Sbjct: 101 ILLSVAAVVSLVLGLPEPGEGKAD 124

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944

>gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus

 Score = 70.6 bits (174), Expect = 2e-17
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 36  YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLI 95
              V E+  +L T   +GL  ++ + E R E +G N +P K  K+  ++     +D  +I
Sbjct: 3   TLSVEEVLARLGTDLEKGL--TEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60

Query: 96  ILEIAALVS 104
           IL IAA+VS
Sbjct: 61  ILLIAAIVS 69

Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69

>gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus

 Score = 58.7 bits (143), Expect = 8e-13
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 41  EICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIA 100
           E+ ++L T   +GL  S  +   R E +G N +PP    + L        +  + IL  A
Sbjct: 11  EVLERLQTDLEKGL--SSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILLAA 68

Query: 101 ALVSLGL 107
           A++S  L
Sbjct: 69  AVLSALL 75

This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75

>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 16  RQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPP 75
                                    E+  +L+TSP  GL  S+ +++ R + +G N +P 
Sbjct: 7   NFSVNKSSSTPVTSETWHPLSVERNELLLELFTSPTTGL--SEEEVKRRLKKYGPNELPE 64

Query: 76  KPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPGGES 116
           +  ++ L+      +D  +I+L +AAL+S  +  +   G  
Sbjct: 65  EKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVD 105

Length = 917

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
PF00690	69	Cation_ATPase_N: Cation transporter/ATPase, N-term	99.84
smart00831	64	Cation_ATPase_N Cation transporter/ATPase, N-termi	99.8
KOG0204|consensus	1034		99.72
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	99.66
KOG0202|consensus	972		99.57
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	99.55
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	99.49
PRK15122	903	magnesium-transporting ATPase; Provisional	99.49
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	99.46
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	99.45
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	99.45
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	99.16
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	99.06
KOG0203|consensus	1019		99.04
KOG0205|consensus	942		98.71
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	98.52
KOG0208|consensus	1140		87.03
PRK01122	679	potassium-transporting ATPase subunit B; Provision	84.42
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	84.12
PRK14010	673	potassium-transporting ATPase subunit B; Provision	82.0
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	80.26

>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.84  E-value=5e-21  Score=121.89  Aligned_cols=68  Identities=31%  Similarity=0.529  Sum_probs=65.5

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHH
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVS  104 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS  104 (125)
                      +..+++++++.|+|+..+||+++|  |++||++||+|++++++++++|++|+++|.|||++||+++|+||
T Consensus         2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS   69 (69)
T PF00690_consen    2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS   69 (69)
T ss_dssp             TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence            567899999999999999999998  99999999999999999999999999999999999999999997

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....

>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus

Probab=99.80  E-value=1.3e-19  Score=113.38  Aligned_cols=62  Identities=29%  Similarity=0.398  Sum_probs=58.6

Q ss_pred             HhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q psy10302         45 KLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLS  108 (125)
Q Consensus        45 ~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg  108 (125)
                      .++++.++||++++  |++||++||+|++++++++++|++|+++|.|||+++|+++|++|+++|
T Consensus         2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~   63 (64)
T smart00831        2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG   63 (64)
T ss_pred             CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            46788888999988  999999999999999999999999999999999999999999999986

This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.

>KOG0204|consensus

Probab=99.72  E-value=4.3e-17  Score=142.59  Aligned_cols=103  Identities=54%  Similarity=0.929  Sum_probs=96.7

Q ss_pred             CCCHHHHHHHHHhcChhhHHHHHhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhh
Q psy10302         12 GITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQD   91 (125)
Q Consensus        12 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~d   91 (125)
                      ++++++|.++++.++.   ..++++++++++++.|+||+..||+.++++..+||+.||.|.+|++++++||+++|++|+|
T Consensus        79 ~i~~e~l~~i~~~~~~---~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD  155 (1034)
T KOG0204|consen   79 GIGAEELVKIVKEHDL---KALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQD  155 (1034)
T ss_pred             ccCHHHHHHHhhccch---hhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhcc
Confidence            7888999999999875   5778999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCc
Q psy10302         92 VTLIILEIAALVSLGLSFYHPGGESE  117 (125)
Q Consensus        92 p~i~iLl~aaiiS~ilg~~~~~~~~~  117 (125)
                      ..++||++||++|+.+|.+.+++.++
T Consensus       156 ~TLiIL~vaAvvSl~lgi~~~g~~~G  181 (1034)
T KOG0204|consen  156 VTLIILMVAAVVSLGLGIYTPGIEDG  181 (1034)
T ss_pred             chHHHHHHHHHHHHhhhhccCCCCcc
Confidence            99999999999999999998887664

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=99.66  E-value=4.4e-16  Score=139.22  Aligned_cols=100  Identities=41%  Similarity=0.650  Sum_probs=90.6

Q ss_pred             CCCccCCCHHHHHHHHHhcChhhHHHHHhhCCHHHHHHHhCCCCCCCCC--ccHHHHHHHHHhhCCCCCCCCCCchHHHH
Q psy10302          7 RPTQYGITLRQLRELMEVRGREGIAKINEYGGVPEICKKLYTSPNEGLG--GSQTDLEHRREVFGSNIIPPKPSKTFLQL   84 (125)
Q Consensus         7 ~~~~f~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~t~~~~GLs--~~e~~~~~R~~~yG~N~l~~~k~~s~~~~   84 (125)
                      .+.+|++...++.++++..++  .+.++++++++++++.|+++.++|||  ++|  |++||++||+|++++++++++|++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~e--v~~r~~~yG~N~l~~~~~~s~~~~   89 (941)
T TIGR01517        14 FTDGFDVGVSILTDLTDIFKR--APIYEKLGGAEGIATKLKTDLNEGVRLSSST--LERREKVYGKNELPEKPPKSFLQI   89 (941)
T ss_pred             cCCCCCCCHHHHHHhcCchhh--HHHHHHhCCHHHHHHHhCcCcccCCCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHH
Confidence            467899999999998866432  25678899999999999999989999  777  999999999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHhhhc
Q psy10302         85 VWEALQDVTLIILEIAALVSLGLSFY  110 (125)
Q Consensus        85 ~l~~f~dp~i~iLl~aaiiS~ilg~~  110 (125)
                      |++||++|++++|++++++|++++.+
T Consensus        90 ~~~~f~~~~~~~l~~~ails~~~~~~  115 (941)
T TIGR01517        90 VWAALSDQTLILLSVAAVVSLVLGLP  115 (941)
T ss_pred             HHHHHhCHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999855

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>KOG0202|consensus

Probab=99.57  E-value=7.8e-15  Score=128.48  Aligned_cols=76  Identities=25%  Similarity=0.438  Sum_probs=72.6

Q ss_pred             hCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q psy10302         36 YGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG  113 (125)
Q Consensus        36 ~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~~  113 (125)
                      ..++++++..|.+++.+|||.+|  +.+||+.||+|+++....+++|+++++||.||++.||+++|+|||+++.|.++
T Consensus         6 ~~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~   81 (972)
T KOG0202|consen    6 AKSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEP   81 (972)
T ss_pred             cCcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccc
Confidence            36899999999999999999999  99999999999999999999999999999999999999999999999998754

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=99.55  E-value=9.7e-15  Score=132.03  Aligned_cols=77  Identities=21%  Similarity=0.219  Sum_probs=72.7

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG  113 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~~  113 (125)
                      +..+++++++.|+|+..+|||++|  |++||++||+|++++++++++|++|++||+||++++|++||++|++++.|.++
T Consensus         8 ~~~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~   84 (1053)
T TIGR01523         8 FSDIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEG   84 (1053)
T ss_pred             hhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHH
Confidence            677899999999999878999999  99999999999999999999999999999999999999999999999988653

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=99.49  E-value=5.9e-14  Score=124.98  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=72.1

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCC-ccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHH-hhHHHHHHHHHHHHHHHhhhcc
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLG-GSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEAL-QDVTLIILEIAALVSLGLSFYH  111 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs-~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f-~dp~i~iLl~aaiiS~ilg~~~  111 (125)
                      ++..+++++++.|+++..+||| ++|  +++||++||+|+++.++++++|++|++|| +||++++|++++++|+++|.|.
T Consensus         4 ~~~~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~   81 (884)
T TIGR01522         4 YCELSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNID   81 (884)
T ss_pred             hhhCCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchh
Confidence            3567899999999999988999 777  99999999999999999999999999999 9999999999999999999886


Q ss_pred             CC
Q psy10302        112 PG  113 (125)
Q Consensus       112 ~~  113 (125)
                      ++
T Consensus        82 ~~   83 (884)
T TIGR01522        82 DA   83 (884)
T ss_pred             hH
Confidence            53

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=99.49  E-value=1e-13  Score=123.78  Aligned_cols=75  Identities=19%  Similarity=0.293  Sum_probs=70.0

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccC
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP  112 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~  112 (125)
                      +-.+++++++.|+++. +|||++|  |++||++||+|++++++++++|++|++||+||++++|++++++|++++.|..
T Consensus        28 ~~~~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~  102 (903)
T PRK15122         28 AANSLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLP  102 (903)
T ss_pred             HhCCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence            5668999999999996 5999999  9999999999999999999999999999999999999999999999987754

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=99.46  E-value=1.3e-13  Score=123.21  Aligned_cols=75  Identities=23%  Similarity=0.340  Sum_probs=69.5

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccC
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP  112 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~  112 (125)
                      +..+++++++.|+++.+ |||++|  |++||++||+|+++.++++++|++|+++|+||++++|++++++|++++.|.+
T Consensus        50 ~~~~~~~v~~~l~~~~~-GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~  124 (902)
T PRK10517         50 AVMPEEELWKTFDTHPE-GLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFA  124 (902)
T ss_pred             HcCCHHHHHHHhCCCCC-CCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHH
Confidence            35589999999999975 999998  9999999999999999999999999999999999999999999999987754

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=99.45  E-value=2.4e-13  Score=122.42  Aligned_cols=76  Identities=17%  Similarity=0.127  Sum_probs=70.5

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYH  111 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~  111 (125)
                      ++..+.+++++.|+|+..+|||++|  |++||++||+|++++++++++|++|+++|++|++++|++++++|+++..+.
T Consensus        17 ~~~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~   92 (997)
T TIGR01106        17 DHKLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ   92 (997)
T ss_pred             chhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999888999998  999999999999999999999999999999999999999999998875543

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=99.45  E-value=2.2e-13  Score=121.21  Aligned_cols=76  Identities=21%  Similarity=0.193  Sum_probs=69.9

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG  113 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~~  113 (125)
                      +..+++++++.|+++.+ |||++|  |++||++||+|++++++++++|++|+++|++|++++|++++++|++++.|.++
T Consensus        16 ~~~~~~~~~~~l~~~~~-GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~   91 (867)
T TIGR01524        16 SQMGKETLLRKLGVHET-GLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEAT   91 (867)
T ss_pred             HhCCHHHHHHHhCCCCC-CCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHH
Confidence            45688999999999875 999999  99999999999999999999999999999999999999999999999877643

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=99.16  E-value=4.1e-11  Score=105.46  Aligned_cols=58  Identities=21%  Similarity=0.277  Sum_probs=53.0

Q ss_pred             CCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q psy10302         53 GLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG  113 (125)
Q Consensus        53 GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~~  113 (125)
                      |||++|  |++||++||+|++++++ +++|++|+++|++|++++|++++++|+++|.|.++
T Consensus         1 GLs~~e--a~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~   58 (755)
T TIGR01647         1 GLTSAE--AKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALENWVDF   58 (755)
T ss_pred             CcCHHH--HHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhcchhhh
Confidence            899999  99999999999999854 56789999999999999999999999999988654

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.06  E-value=3.8e-10  Score=101.28  Aligned_cols=78  Identities=27%  Similarity=0.443  Sum_probs=71.0

Q ss_pred             hhCCHH--HHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccC
Q psy10302         35 EYGGVP--EICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP  112 (125)
Q Consensus        35 ~~~~~~--~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~  112 (125)
                      +..+++  ++...+.++..+||+++|  +.+|+++||+|++++.+..++|..|+.||++|++++|++++++|++++.|.+
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~  101 (917)
T COG0474          24 HPLSVERNELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVD  101 (917)
T ss_pred             cccccchhhHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            344455  888889898889999988  9999999999999999999999999999999999999999999999999976


Q ss_pred             CC
Q psy10302        113 GG  114 (125)
Q Consensus       113 ~~  114 (125)
                      .+
T Consensus       102 ~~  103 (917)
T COG0474         102 AG  103 (917)
T ss_pred             cC
Confidence            54

>KOG0203|consensus

Probab=99.04  E-value=9.8e-10  Score=96.99  Aligned_cols=82  Identities=20%  Similarity=0.200  Sum_probs=75.3

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG  113 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~~  113 (125)
                      .|..+.+++++++.+|..+|||..+  +.+++.+.|||.+++||+.+-|.+|++|+++.+-++|+++|++|++...+...
T Consensus        39 ~H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s  116 (1019)
T KOG0203|consen   39 DHKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAS  116 (1019)
T ss_pred             cccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcc
Confidence            5788999999999999999999999  99999999999999999999999999999999999999999999998776554


Q ss_pred             CCCc
Q psy10302        114 GESE  117 (125)
Q Consensus       114 ~~~~  117 (125)
                      -.+.
T Consensus       117 ~~~~  120 (1019)
T KOG0203|consen  117 TEDD  120 (1019)
T ss_pred             cCCC
Confidence            4433

>KOG0205|consensus

Probab=98.71  E-value=2.4e-08  Score=86.79  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=66.5

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhh------
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLS------  108 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg------  108 (125)
                      .-.+++++.+.|..+.. |||.+|  +++|++.||+|++.+++. +.+.+|+.-|.+|+.+++-+||++.+.+.      
T Consensus        19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkke-n~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~   94 (942)
T KOG0205|consen   19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRP   94 (942)
T ss_pred             ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhh-hHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCC
Confidence            44678999999988866 999999  999999999999997765 45667899999999999999999999987      


Q ss_pred             -hccCCCC
Q psy10302        109 -FYHPGGE  115 (125)
Q Consensus       109 -~~~~~~~  115 (125)
                       +|.|+++
T Consensus        95 ~DW~DF~g  102 (942)
T KOG0205|consen   95 PDWQDFVG  102 (942)
T ss_pred             cchhhhhh
Confidence             7776653

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=98.52  E-value=1.4e-07  Score=85.84  Aligned_cols=57  Identities=21%  Similarity=0.361  Sum_probs=49.3

Q ss_pred             CCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhc
Q psy10302         51 NEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFY  110 (125)
Q Consensus        51 ~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~  110 (125)
                      ..|||++|  +++|+++||+|+++.++ +++|++|++++.+||.+++++++++.++-+.|
T Consensus       137 ~~GLs~~e--~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~~~  193 (1054)
T TIGR01657       137 SNGLTTGD--IAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDEYY  193 (1054)
T ss_pred             ccCCCHHH--HHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhhhH
Confidence            35999998  99999999999999864 79999999999999999999987776654433

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>KOG0208|consensus

Probab=87.03  E-value=0.78  Score=42.55  Aligned_cols=41  Identities=22%  Similarity=0.398  Sum_probs=35.3

Q ss_pred             CCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHH
Q psy10302         51 NEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTL   94 (125)
Q Consensus        51 ~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i   94 (125)
                      ..||+..+  +.+||.-||+|.+.-+ -++.+.+++++.-+||-
T Consensus       158 ~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfY  198 (1140)
T KOG0208|consen  158 SNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFY  198 (1140)
T ss_pred             cCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHH
Confidence            45999988  9999999999999976 44789999999888875

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=84.42  E-value=1.2  Score=39.68  Aligned_cols=26  Identities=8%  Similarity=0.268  Sum_probs=23.2

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhhccC
Q psy10302         87 EALQDVTLIILEIAALVSLGLSFYHP  112 (125)
Q Consensus        87 ~~f~dp~i~iLl~aaiiS~ilg~~~~  112 (125)
                      .||+||++++|++++++|++++.+..
T Consensus        29 ~~~~~p~~~vl~~~a~ls~~~~~~~~   54 (679)
T PRK01122         29 VQIRNPVMFVVEVGSILTTILTIAPL   54 (679)
T ss_pred             HHhhChHHHHHHHHHHHHHHHHhhhh
Confidence            48999999999999999999987644

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=84.12  E-value=1.4  Score=40.88  Aligned_cols=41  Identities=17%  Similarity=0.188  Sum_probs=35.4

Q ss_pred             hCCCCCCCCCCchH---HHHHHHHHhhHHHHHHHHHHHHHHHhh
Q psy10302         68 FGSNIIPPKPSKTF---LQLVWEALQDVTLIILEIAALVSLGLS  108 (125)
Q Consensus        68 yG~N~l~~~k~~s~---~~~~l~~f~dp~i~iLl~aaiiS~ilg  108 (125)
                      |..|.+...|-..|   ++.+++||+.|.++.++++++++++..
T Consensus         1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~   44 (1057)
T TIGR01652         1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPI   44 (1057)
T ss_pred             CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCC
Confidence            56799988877666   799999999999999999999998743

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=82.00  E-value=1.5  Score=39.00  Aligned_cols=26  Identities=23%  Similarity=0.589  Sum_probs=23.6

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhhccC
Q psy10302         87 EALQDVTLIILEIAALVSLGLSFYHP  112 (125)
Q Consensus        87 ~~f~dp~i~iLl~aaiiS~ilg~~~~  112 (125)
                      .+|+||++++|++++++|++++.|.+
T Consensus        28 ~~~~~p~~~il~~aa~ls~~~~~~~~   53 (673)
T PRK14010         28 YMIKNPIMFVVEVGMLLALGLTIYPD   53 (673)
T ss_pred             HHHHChHHHHHHHHHHHHHHHHHHhh
Confidence            37899999999999999999999865

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=80.26  E-value=1.7  Score=38.75  Aligned_cols=24  Identities=8%  Similarity=0.253  Sum_probs=22.0

Q ss_pred             HHHhhHHHHHHHHHHHHHHHhhhc
Q psy10302         87 EALQDVTLIILEIAALVSLGLSFY  110 (125)
Q Consensus        87 ~~f~dp~i~iLl~aaiiS~ilg~~  110 (125)
                      .||+||++++|++++++|++++.+
T Consensus        28 ~~~~~p~~~il~~~a~is~~l~~~   51 (675)
T TIGR01497        28 AQWRNPVMFIVWVGSLLTTCITIA   51 (675)
T ss_pred             HHhhChHHHHHHHHHHHHHHHHHh
Confidence            479999999999999999999865

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	125
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	5e-12
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	6e-10
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	7e-10
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	7e-09
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	3e-08

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 39  VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
             E       S   GL  +   ++   E +G N +P +  K+  +LV E  +D+ + IL 
Sbjct: 10  TEECLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67

Query: 99  IAALVSLGLSFYHPGGESEHDNEET 123
           +AA +S  L+++  G E+     E 
Sbjct: 68  LAACISFVLAWFEEGEETITAFVEP 92

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 2/84 (2%)

Query: 39  VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
           + E+  K  T    GL  +    +      G N + P P+          L     I+L 
Sbjct: 53  LDELHNKYGTDLTRGL--TNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110

Query: 99  IAALVSLGLSFYHPGGESEHDNEE 122
           I A++           E E  N+ 
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDN 134

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034

 Score = 54.2 bits (131), Expect = 7e-10
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 2/82 (2%)

Query: 41  EICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIA 100
           E+ +K  TS  +GL  S +         G N + P             L      ++ +A
Sbjct: 60  ELEQKYQTSATKGL--SASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVA 117

Query: 101 ALVSLGLSFYHPGGESEHDNEE 122
           A + L              ++ 
Sbjct: 118 AAICLIAFAIQASEGDLTTDDN 139

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920

 Score = 51.2 bits (123), Expect = 7e-09
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 39  VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
           VPE    L T    GL  +  ++  RR  +G N +  +    FL+            ++E
Sbjct: 75  VPE--DMLQTDTRVGL--TSEEVVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVME 129

Query: 99  IAALVSLGL 107
            AA+++ GL
Sbjct: 130 GAAVLAAGL 138

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 39  VPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILE 98
           + E+ ++L  S  EGL  +  + E R ++FG N +  K     L+     + +    ++E
Sbjct: 19  IEEVFQQLKCSR-EGL--TTQEGEDRIQIFGPNKLEEKKESKLLKF-LGFMWNPLSWVME 74

Query: 99  IAALVSLGL 107
           +AA++++ L
Sbjct: 75  MAAIMAIAL 83

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	99.46
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	99.42
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	99.41
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	99.08
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	99.08

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=99.46  E-value=1.1e-13  Score=123.36  Aligned_cols=75  Identities=20%  Similarity=0.088  Sum_probs=70.6

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhc
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFY  110 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~  110 (125)
                      +|..+++++++.|+|++.+|||++|  |++|+++||+|++++++++++|++|++||++|++++|+++|++|++++.+
T Consensus        53 ~~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~  127 (1034)
T 3ixz_A           53 DHQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAI  127 (1034)
T ss_pred             hhhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999988999999  99999999999999999999999999999999999999999999987644

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=99.42  E-value=1.6e-13  Score=122.38  Aligned_cols=76  Identities=18%  Similarity=0.120  Sum_probs=70.6

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYH  111 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~  111 (125)
                      +|..+++++++.|+++..+|||++|  +++|+++||+|++++++++++|++|++||++||+++|++++++|++++.+.
T Consensus        48 ~~~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~  123 (1028)
T 2zxe_A           48 DHKLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQ  123 (1028)
T ss_dssp             CSSSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence            3578999999999999878999998  999999999999999999999999999999999999999999999987553

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=99.41  E-value=3.6e-13  Score=119.57  Aligned_cols=76  Identities=26%  Similarity=0.394  Sum_probs=71.0

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYH  111 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~  111 (125)
                      +|..+++++++.|+++..+|||++|  +++|+++||+|+++.++++++|++|++||++|++++|++++++|++++.+.
T Consensus         5 ~~~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~   80 (995)
T 3ar4_A            5 AHSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFE   80 (995)
T ss_dssp             GGGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             hhhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3678999999999999888999988  999999999999999999999999999999999999999999999987653

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=99.08  E-value=1.2e-12  Score=115.62  Aligned_cols=70  Identities=26%  Similarity=0.351  Sum_probs=63.7

Q ss_pred             hhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q psy10302         35 EYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLS  108 (125)
Q Consensus        35 ~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg  108 (125)
                      +..+.+++++.|+++ .+|||++|  +++|+++||+|++++++ .++|+.|++||+||++++|++++++|++++
T Consensus        15 ~~~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~   84 (885)
T 3b8c_A           15 EKIPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALA   84 (885)
T ss_dssp             SSSSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSS
T ss_pred             HhCCHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            557888999999998 46999998  99999999999999877 678889999999999999999999999887

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=99.08  E-value=4.6e-11  Score=105.87  Aligned_cols=67  Identities=19%  Similarity=0.246  Sum_probs=59.4

Q ss_pred             HHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccC
Q psy10302         43 CKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHP  112 (125)
Q Consensus        43 ~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~  112 (125)
                      .+.|+++..+|||++|  +++|+++||+|++++++ .++|..|+.+|++|+.++|++++++++++|.|.+
T Consensus        77 ~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~  143 (920)
T 1mhs_A           77 EDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVD  143 (920)
T ss_dssp             STTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSH
T ss_pred             HHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            4568888778999998  99999999999999765 6788999999999999999999999998887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	125
d1wpga4	472	f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP	4e-19

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 79.3 bits (195), Expect = 4e-19
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 38  GVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIIL 97
              E       S   GL  +   ++   E +G N +P +  K+  +LV E  +D+ + IL
Sbjct: 8   STEECLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65

Query: 98  EIAALVSLGLSFYHPGGESEHD 119
            +AA +S  L+++  G E+   
Sbjct: 66  LLAACISFVLAWFEEGEETITA 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	125
d1wpga4	472	Calcium ATPase, transmembrane domain M {Rabbit (Or	99.74

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.74  E-value=2.2e-18  Score=140.09  Aligned_cols=78  Identities=27%  Similarity=0.410  Sum_probs=74.1

Q ss_pred             HhhCCHHHHHHHhCCCCCCCCCccHHHHHHHHHhhCCCCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q psy10302         34 NEYGGVPEICKKLYTSPNEGLGGSQTDLEHRREVFGSNIIPPKPSKTFLQLVWEALQDVTLIILEIAALVSLGLSFYHPG  113 (125)
Q Consensus        34 ~~~~~~~~l~~~l~t~~~~GLs~~e~~~~~R~~~yG~N~l~~~k~~s~~~~~l~~f~dp~i~iLl~aaiiS~ilg~~~~~  113 (125)
                      .|..+++++++.|+||+++|||++|  |++||++||+|++++++++|+|++|+++|+||++++|++||++|+++|.+.++
T Consensus         4 ~h~~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~   81 (472)
T d1wpga4           4 AHSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG   81 (472)
T ss_dssp             GGGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT
T ss_pred             hhhCCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcc
Confidence            4678999999999999999999999  99999999999999999999999999999999999999999999999987654