Psyllid ID: psy10316

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPCSSGAGTGAKPSPSEEDGNWPISSPKDLNFPETIPEESSSVEEEHVVSLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQELMREQESRELNRSMGDEQVDPL
cHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccc
cHHHHHHHHHHccccEHcccccHHHHHcccccEEEEcHHHHHHHHHcccccccccccHHHHHHHHHHHccHHEEEEcHHHHHHHHHHHHHcccHcccccccHHHHHHHHHHHHHHHccccHHHccccHHHHHHHccccccEEEcHHHHHHHccccccccccccEccEEEEEcccccccccccHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccccccccccc
MKQALRSLIQYHGftglwkglmptllrdvpfsAIYWVSYEQLKASYIRRhqyskqpslvhNFLFGSLAGSVAALVTTPFDIVKTLRQIdvaeneimkspptrsqsTKTILNQLLTskgyralftgkhsdghegfagpssppsqsyydpcssgagtgakpspseedgnwpisspkdlnfpetipeesssveeeHVVSLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQELMREQESRELnrsmgdeqvdpl
MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVaeneimkspptrsqstkTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPCSSGAGTGAKPSPSEEDGNWPISSPKDLNFPETIPEESSSVEEEHVVSLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQELMREQesrelnrsmgdeqvdpl
MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGpssppsqsyydpcssGAGTGAKPSPSEEDGNWPISSPKDLNFPETIPeesssveeehvvsLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQELMREQESRELNRSMGDEQVDPL
*****RSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVA*****************ILNQLLTSKGYRALF**********************************************************************VVSLAPRLIKVAPSCAIMITSYELGKRYFVSKNT***************************
*KQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIR*****KQ*SLVHNFLFGSLAGSVAALVTTPFDIVKTLRQ****************QSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPCSSGAGTGAKPSPSEEDGNWPISSPKDLNF*ETIPEESSSVEEEHVVSLAPRLIKVAPSCAIMITSYELGKRYFVS******************************
MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMK*********KTILNQLLTSKGYRALFTGKHSDG************************************NWPISSPKDLNFPET*************VSLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQELMRE******************
MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPCSSGAGTGAKPSPSEEDGNWPISSPKDLNFPETIPEESSSVEEEHVVSLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQEL*********************
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPCSSGAGTGAKPSPSEEDGNWPISSPKDLNFPETIPEESSSVEEEHVVSLAPRLIKVAPSCAIMITSYELGKRYFVSKNTATLQELMREQESRELNRSMGDEQVDPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query254 2.2.26 [Sep-21-2011]
Q6P316341 Solute carrier family 25 yes N/A 0.488 0.363 0.424 3e-24
Q6DHC3353 Solute carrier family 25 yes N/A 0.488 0.351 0.408 2e-23
Q6DFK2341 Solute carrier family 25 N/A N/A 0.476 0.354 0.426 5e-23
Q8BGP6337 Solute carrier family 25 yes N/A 0.440 0.332 0.460 1e-22
Q7SXW0359 Solute carrier family 25 no N/A 0.476 0.337 0.398 3e-20
Q498U3337 Solute carrier family 25 no N/A 0.440 0.332 0.415 5e-20
Q17QI7359 Solute carrier family 25 yes N/A 0.488 0.345 0.392 2e-19
Q0VCH6338 Solute carrier family 25 no N/A 0.440 0.331 0.433 3e-19
Q9BZJ4359 Solute carrier family 25 yes N/A 0.488 0.345 0.376 7e-19
Q4V8K4359 Solute carrier family 25 no N/A 0.440 0.311 0.433 2e-18
>sp|Q6P316|S2540_XENTR Solute carrier family 25 member 40 OS=Xenopus tropicalis GN=slc25a40 PE=2 SV=1 Back     alignment and function desciption
 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 1/125 (0%)

Query: 1   MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVH 60
           ++Q ++S +   G+  LWKG  PT+LRDVPFSA+YW +YE +K S  +R+  + QP+   
Sbjct: 180 LRQCIQSSVAKDGWLALWKGWGPTVLRDVPFSALYWHNYELVKQSLCQRYN-TLQPTFAI 238

Query: 61  NFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYR 120
           +F  G+++GS+AA+VT PFD+VKT RQ++V E E+      RS ST  ++  ++   G+ 
Sbjct: 239 SFTAGAVSGSIAAIVTLPFDVVKTRRQVEVGELEMFTYSQKRSSSTWKLMRAIVIENGFG 298

Query: 121 ALFTG 125
            LF G
Sbjct: 299 GLFAG 303

Xenopus tropicalis (taxid: 8364)
>sp|Q6DHC3|S2540_DANRE Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q6DFK2|S2540_XENLA Solute carrier family 25 member 40 OS=Xenopus laevis GN=slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q8BGP6|S2540_MOUSE Solute carrier family 25 member 40 OS=Mus musculus GN=Slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q7SXW0|S2539_DANRE Solute carrier family 25 member 39 OS=Danio rerio GN=slc25a39 PE=2 SV=1 Back     alignment and function description
>sp|Q498U3|S2540_RAT Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2 Back     alignment and function description
>sp|Q17QI7|S2539_BOVIN Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2 Back     alignment and function description
>sp|Q0VCH6|S2540_BOVIN Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|Q9BZJ4|S2539_HUMAN Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=2 Back     alignment and function description
>sp|Q4V8K4|S2539_RAT Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
242006336 373 mitochondrial carrier protein, putative 0.488 0.332 0.5 6e-28
307181255 369 Solute carrier family 25 member 40 [Camp 0.472 0.325 0.472 7e-27
307203937 369 Solute carrier family 25 member 40 [Harp 0.472 0.325 0.48 1e-26
332030333332 Solute carrier family 25 member 40 [Acro 0.468 0.358 0.472 8e-26
345490362 370 PREDICTED: solute carrier family 25 memb 0.472 0.324 0.472 5e-25
345490364 360 PREDICTED: solute carrier family 25 memb 0.472 0.333 0.472 5e-25
193620187 366 PREDICTED: solute carrier family 25 memb 0.464 0.322 0.480 8e-25
239792327 365 ACYPI003858 [Acyrthosiphon pisum] 0.460 0.320 0.515 2e-23
193641193 365 PREDICTED: solute carrier family 25 memb 0.460 0.320 0.515 3e-23
442758237346 Putative mitochondrial carrier protein c 0.456 0.335 0.487 6e-23
>gi|242006336|ref|XP_002424007.1| mitochondrial carrier protein, putative [Pediculus humanus corporis] gi|212507299|gb|EEB11269.1| mitochondrial carrier protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 92/130 (70%), Gaps = 6/130 (4%)

Query: 1   MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVH 60
           + QAL+SL+QYHG TGLWKGL  TLLRDVPFSAIYWV YE  K+ +I  ++  + P++  
Sbjct: 201 IGQALKSLLQYHGVTGLWKGLGSTLLRDVPFSAIYWVHYEWFKSKFIPLNEV-QAPNVAF 259

Query: 61  NFLFGSLAGSVAALVTTPFDIVKTLRQIDVAENEI----MKSPPTRSQSTK-TILNQLLT 115
           +FL G+L+G VAA +TTPFD+ KT +QI++ E EI     K+PP + +ST  +IL ++ +
Sbjct: 260 SFLGGALSGCVAAFITTPFDVAKTHQQIELGEMEIYRGKCKNPPGKIKSTTYSILKKIYS 319

Query: 116 SKGYRALFTG 125
             G+  +F G
Sbjct: 320 QNGFSGIFAG 329

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307181255|gb|EFN68945.1| Solute carrier family 25 member 40 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307203937|gb|EFN82844.1| Solute carrier family 25 member 40 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332030333|gb|EGI70076.1| Solute carrier family 25 member 40 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|345490362|ref|XP_001606469.2| PREDICTED: solute carrier family 25 member 40-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345490364|ref|XP_003426358.1| PREDICTED: solute carrier family 25 member 40-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|193620187|ref|XP_001944308.1| PREDICTED: solute carrier family 25 member 40-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|239792327|dbj|BAH72517.1| ACYPI003858 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|193641193|ref|XP_001950306.1| PREDICTED: solute carrier family 25 member 40-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|442758237|gb|JAA71277.1| Putative mitochondrial carrier protein cgi-69 [Ixodes ricinus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
MGI|MGI:2442486337 Slc25a40 "solute carrier famil 0.440 0.332 0.460 1.3e-32
ZFIN|ZDB-GENE-040718-52353 slc25a40 "solute carrier famil 0.488 0.351 0.408 4.3e-32
UNIPROTKB|F1NFV0339 SLC25A40 "Uncharacterized prot 0.476 0.356 0.401 1.1e-31
FB|FBgn0031039387 Shawn "Shawn" [Drosophila mela 0.456 0.299 0.427 1.2e-30
FB|FBgn0037512449 CG2616 [Drosophila melanogaste 0.476 0.269 0.468 1.3e-30
RGD|1308774337 Slc25a40 "solute carrier famil 0.480 0.362 0.390 1.6e-30
UNIPROTKB|Q498U3337 Slc25a40 "Solute carrier famil 0.480 0.362 0.390 1.6e-30
UNIPROTKB|F1LNM8248 Slc25a40 "Solute carrier famil 0.480 0.491 0.390 1.6e-30
ZFIN|ZDB-GENE-040426-1250359 slc25a39 "solute carrier famil 0.472 0.334 0.401 3.3e-30
UNIPROTKB|Q0VCH6338 SLC25A40 "Solute carrier famil 0.440 0.331 0.433 1.1e-29
MGI|MGI:2442486 Slc25a40 "solute carrier family 25, member 40" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
 Score = 263 (97.6 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 52/113 (46%), Positives = 71/113 (62%)

Query:    13 GFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVA 72
             G+  LWKG  PT+LRDVPFSA+YW +YE LK  ++       +P+ + NF  G+L+GS A
Sbjct:   192 GWISLWKGWAPTILRDVPFSAMYWYNYENLKR-WLCEKSGLYEPTFMINFTSGALSGSFA 250

Query:    73 ALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTG 125
             A+ T PFD+VKT +Q  +  NE  K P     ST TI+  ++  KG+  LFTG
Sbjct:   251 AVATLPFDVVKTQKQTQLWTNEYCKFPAPLDMSTWTIMKNIVADKGFSGLFTG 303
GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
ZFIN|ZDB-GENE-040718-52 slc25a40 "solute carrier family 25, member 40" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFV0 SLC25A40 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0031039 Shawn "Shawn" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037512 CG2616 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1308774 Slc25a40 "solute carrier family 25, member 40" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q498U3 Slc25a40 "Solute carrier family 25 member 40" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LNM8 Slc25a40 "Solute carrier family 25 member 40" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1250 slc25a39 "solute carrier family 25, member 39" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCH6 SLC25A40 "Solute carrier family 25 member 40" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-13
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-09
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 62.3 bits (152), Expect = 7e-13
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 1  MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRH 50
          +    + + +  G  GL+KGL+P LLR  P +AIY+ +YE LK   +++ 
Sbjct: 47 ILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96

Length = 96
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 254
KOG0764|consensus299 100.0
KOG0753|consensus317 100.0
KOG0752|consensus320 100.0
KOG0757|consensus319 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.98
KOG0758|consensus297 99.97
KOG0759|consensus286 99.97
KOG0760|consensus302 99.97
KOG0762|consensus311 99.96
KOG0754|consensus294 99.95
KOG0755|consensus320 99.95
PTZ00168259 mitochondrial carrier protein; Provisional 99.95
KOG0761|consensus361 99.95
KOG0751|consensus694 99.94
KOG0768|consensus323 99.94
KOG0752|consensus320 99.94
KOG0765|consensus333 99.94
KOG0763|consensus301 99.94
KOG0036|consensus463 99.93
KOG0770|consensus353 99.93
KOG0769|consensus308 99.92
KOG0767|consensus333 99.92
KOG0766|consensus297 99.91
KOG0753|consensus317 99.91
KOG0756|consensus299 99.91
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.91
KOG0764|consensus299 99.91
KOG0749|consensus298 99.9
KOG0757|consensus319 99.89
KOG0758|consensus297 99.88
KOG0762|consensus311 99.88
PTZ00168259 mitochondrial carrier protein; Provisional 99.87
KOG0759|consensus286 99.87
KOG0750|consensus304 99.86
KOG0768|consensus323 99.85
KOG0749|consensus298 99.83
KOG0760|consensus302 99.82
KOG0754|consensus294 99.81
KOG0765|consensus333 99.81
KOG0751|consensus694 99.79
KOG0761|consensus361 99.78
KOG0763|consensus301 99.77
KOG0766|consensus297 99.76
KOG0755|consensus320 99.76
KOG0036|consensus463 99.74
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG0756|consensus299 99.64
KOG0750|consensus304 99.62
KOG0767|consensus333 99.59
KOG0770|consensus353 99.58
KOG1519|consensus297 99.38
KOG0769|consensus308 99.37
KOG1519|consensus297 99.17
KOG2745|consensus321 99.08
KOG2745|consensus321 98.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 98.6
KOG2954|consensus427 98.48
KOG2954|consensus427 94.44
>KOG0764|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.2e-39  Score=269.92  Aligned_cols=217  Identities=20%  Similarity=0.302  Sum_probs=177.0

Q ss_pred             HHHHHHHHHhhchhhhcccchHHHHhHhHHHHHHHHHHHHHHHHHhhhccCCCCCchHHHHHHHHHHHHHHHHHhccHHH
Q psy10316          2 KQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDI   81 (254)
Q Consensus         2 ~~~~~~i~~~eGi~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~l~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~   81 (254)
                      .+++++|++.||++|||||++|.+++..+++++||.+||.+|.++.+... +...++..++.+++.||++..++++|+|+
T Consensus        50 ~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~-~~~l~~~~~l~sa~~AGa~t~~lTNPIWV  128 (299)
T KOG0764|consen   50 FGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFN-SGLLSVLANLSSAAEAGAATTILTNPIWV  128 (299)
T ss_pred             HHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCC-cccchHHHHHHHHHhhhHHHHHhcCCeEE
Confidence            57899999999999999999999999999999999999999999976554 33458999999999999999999999999


Q ss_pred             HHHHhhhccccccccCCCCCCCCCHHHHHHHHHHhhcccccccccccccccCCCCCCCChhhHhHhhhh-----------
Q psy10316         82 VKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPCS-----------  150 (254)
Q Consensus        82 vk~r~q~~~~~~~~~~~~~~~y~~~~~~~~~i~r~eG~~glyrG~~~~~~r~~~~~~~~~~~~~y~~~~-----------  150 (254)
                      +|||++.|....     ....|++++|++++|+++||++|||||+-|.++-   .+..+++++.||..+           
T Consensus       129 vKTRL~~Q~~~~-----~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~G---vshgAiQF~~YE~lK~~~~~~~~~~~  200 (299)
T KOG0764|consen  129 VKTRLMLQSKNV-----QSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLG---VSHGAIQFPAYEELKLRKNRKQGRST  200 (299)
T ss_pred             Eeehhhhhcccc-----cccccccHHHHHHHHHHHHhHHHHHhhhhhHhhh---hchhhhhhhhHHHHHHHHHHhcCCCc
Confidence            999999997543     2468999999999999999999999999777543   345567777777511           


Q ss_pred             -------hhhccccccccCcccCccccc--------CCCCCCCCCchhhhHHHHHhh----cccccchhhhhhhhhhhHH
Q psy10316        151 -------SGAGTGAKPSPSEEDGNWPIS--------SPKDLNFPETIPEESSSVEEE----HVVSLAPRLIKVAPSCAIM  211 (254)
Q Consensus       151 -------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~----lyrGl~~~~~r~~~~~~i~  211 (254)
                             .-+.+.+.+.+++.+.+||+.        .+....|.+.+++.+++|+.|    ||||+.++++|.+|++.|+
T Consensus       201 d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~IT  280 (299)
T KOG0764|consen  201 DNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSDNPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACIT  280 (299)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceee
Confidence                   011111233344444444433        333667888999999998754    9999999999999999999


Q ss_pred             HHHHHHHHHHHhccCc
Q psy10316        212 ITSYELGKRYFVSKNT  227 (254)
Q Consensus       212 ~~~ye~~~~~~~~~~~  227 (254)
                      |.+||.+++++.....
T Consensus       281 F~vyEnv~~~L~~~~~  296 (299)
T KOG0764|consen  281 FLVYENVKHFLVTHRT  296 (299)
T ss_pred             eehHHHHHHHHhcccc
Confidence            9999999999986543

>KOG0753|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 8e-04
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 3   QALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNF 62
           +A +++ +  G  GLWKG  P + R+   +    V+Y+ +K + ++ +  +         
Sbjct: 149 EAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTS 208
Query: 63  LFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRAL 122
            FG  AG    ++ +P D+VKT           M S   +  S       +L  +G RA 
Sbjct: 209 AFG--AGFCTTVIASPVDVVKT---------RYMNSALGQYHSAGHCALTMLRKEGPRAF 257
Query: 123 FTG 125
           + G
Sbjct: 258 YKG 260

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-22
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-19
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-09
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 6e-06
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-20
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-18
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 91.2 bits (227), Expect = 7e-22
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 11/123 (8%)

Query: 3   QALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNF 62
           +A +++ +  G  GLWKG  P + R+   +    V+Y+ +K   + +          H F
Sbjct: 149 EAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIK-DTLLKANLMTDDLPCH-F 206

Query: 63  LFGSLAGSVAALVTTPFDIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRAL 122
                AG    ++ +P D+VKT R         M S   +  S       +L  +G RA 
Sbjct: 207 TSAFGAGFCTTVIASPVDVVKT-R--------YMNSALGQYHSAGHCALTMLRKEGPRAF 257

Query: 123 FTG 125
           + G
Sbjct: 258 YKG 260
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.92
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.91
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=2.5e-35  Score=258.32  Aligned_cols=212  Identities=21%  Similarity=0.297  Sum_probs=166.7

Q ss_pred             HHHHHHHHHhhchhhhcccchHHHHhHhHHHHHHHHHHHHHHHHHhhhccCCCCCchHHHHHHHHHHHHHHHHHhccHHH
Q psy10316          2 KQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQPSLVHNFLFGSLAGSVAALVTTPFDI   81 (254)
Q Consensus         2 ~~~~~~i~~~eGi~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~l~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~   81 (254)
                      ++++++|+++||++|||||+.+++++.++..+++|.+||.+|+.+.+..   +..+....+++|++||+++.++++|+|+
T Consensus        51 ~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~---~~~~~~~~~~ag~~ag~~~~~~~~Pld~  127 (303)
T 2lck_A           51 LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS---EHAGIGSRLLAGSTTGALAVAVAQPTDV  127 (303)
T ss_dssp             HHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCC---SSCCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---cCCcHHHHHHHHHHHHHHHHHHcCcHHH
Confidence            5889999999999999999999999999999999999999999886531   2467788999999999999999999999


Q ss_pred             HHHHhhhccccccccCCCCCCCCCHHHHHHHHHHhhcccccccccccccccCCCCCCCChhhHhHhhh------------
Q psy10316         82 VKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPC------------  149 (254)
Q Consensus        82 vk~r~q~~~~~~~~~~~~~~~y~~~~~~~~~i~r~eG~~glyrG~~~~~~r~~~~~~~~~~~~~y~~~------------  149 (254)
                      ||+|||++...     .....|++.++++++|+++||++|||||+.|+++|..  +...+++..|+.+            
T Consensus       128 vktrlq~~~~~-----~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~--~~~~i~f~~ye~~k~~l~~~~~~~~  200 (303)
T 2lck_A          128 VKVRFQAQARA-----GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNA--IVNCAELVTYDLIKDTLLKANLMTD  200 (303)
T ss_dssp             HHHHHHHSCSC-----CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTTTTTTSCCS
T ss_pred             HHHHHhccccc-----CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHH--HHHHHHHHHHHHHHHHHHhccCCCC
Confidence            99999998642     1245789999999999999999999999999988842  2333444444432            


Q ss_pred             --------hhhhccccc--cccCcccCcccccCCCCCCCCCchhhhHHHHHhh----cccccchhhhhhhhhhhHHHHHH
Q psy10316        150 --------SSGAGTGAK--PSPSEEDGNWPISSPKDLNFPETIPEESSSVEEE----HVVSLAPRLIKVAPSCAIMITSY  215 (254)
Q Consensus       150 --------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----lyrGl~~~~~r~~~~~~i~~~~y  215 (254)
                              +..+++.+.  +.|++..++...... ...|++++++.++++++|    ||||+.|+++|.+|++++.|.+|
T Consensus       201 ~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~-~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~y  279 (303)
T 2lck_A          201 DLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTY  279 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc-ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHH
Confidence                    222222222  223332222111111 124889999999999865    99999999999999999999999


Q ss_pred             HHHHHHHhc
Q psy10316        216 ELGKRYFVS  224 (254)
Q Consensus       216 e~~~~~~~~  224 (254)
                      |.+|+.+..
T Consensus       280 e~~k~~l~~  288 (303)
T 2lck_A          280 EQLKRALMA  288 (303)
T ss_dssp             HHHHSCCCC
T ss_pred             HHHHHHHHH
Confidence            999987764
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 254
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-09
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-07
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 53.6 bits (127), Expect = 4e-09
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 1   MKQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQL 42
                R + +  G    +KG    +LR +   A   V Y+++
Sbjct: 252 TVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI 292
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.95
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.87
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.95  E-value=6.7e-29  Score=213.25  Aligned_cols=210  Identities=16%  Similarity=0.231  Sum_probs=161.5

Q ss_pred             HHHHHHHHHhhchhhhcccchHHHHhHhHHHHHHHHHHHHHHHHHhhhccCCCC--CchHHHHHHHHHHHHHHHHHhccH
Q psy10316          2 KQALRSLIQYHGFTGLWKGLMPTLLRDVPFSAIYWVSYEQLKASYIRRHQYSKQ--PSLVHNFLFGSLAGSVAALVTTPF   79 (254)
Q Consensus         2 ~~~~~~i~~~eGi~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~l~~~~~~~~~--~~~~~~~~ag~~ag~~~~~i~~P~   79 (254)
                      ++++++++++||+++||+|+.+.+++..+..+++|.+||.+++.+.+.......  .....++.+|++||+++.++++|+
T Consensus        53 ~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~  132 (292)
T d1okca_          53 IDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPL  132 (292)
T ss_dssp             HHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhh
Confidence            578999999999999999999999999999999999999999999875432222  235677889999999999999999


Q ss_pred             HHHHHHhhhccccccccCCCCCCCCCHHHHHHHHHHhhcccccccccccccccCCCCCCCChhhHhHhhh----------
Q psy10316         80 DIVKTLRQIDVAENEIMKSPPTRSQSTKTILNQLLTSKGYRALFTGKHSDGHEGFAGPSSPPSQSYYDPC----------  149 (254)
Q Consensus        80 ~~vk~r~q~~~~~~~~~~~~~~~y~~~~~~~~~i~r~eG~~glyrG~~~~~~r~~~~~~~~~~~~~y~~~----------  149 (254)
                      |++|+|||++....    ..+.+|.+..+++++++++||+++||+|+.++++|.  .+....++..|+.+          
T Consensus       133 ~~ik~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~--~~~~~~~~~~~~~~k~~~~~~~~~  206 (292)
T d1okca_         133 DFARTRLAADVGKG----AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI--IIYRAAYFGVYDTAKGMLPDPKNV  206 (292)
T ss_dssp             HHHHHHHHHCCCSS----TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHH--HHHHHHHHHHHHHHHHSSCGGGCS
T ss_pred             hhhheeeecccccc----ccccccccHHHHHHHhhhccchhhhhccccccccce--ehHhhhhhhhccchhhhccccccc
Confidence            99999999986532    235578999999999999999999999999999884  33334444444431          


Q ss_pred             --------hhhh--ccccccccCcc--cCccccc--CCCCCCCCCchhhhHHHHHhh----cccccchhhhhhhhhhhHH
Q psy10316        150 --------SSGA--GTGAKPSPSEE--DGNWPIS--SPKDLNFPETIPEESSSVEEE----HVVSLAPRLIKVAPSCAIM  211 (254)
Q Consensus       150 --------~~~~--~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----lyrGl~~~~~r~~~~~~i~  211 (254)
                              +..+  .+.+.+.|++.  ++++...  ...+..|++++++.++++++|    ||||+.++++|.+| +++.
T Consensus       207 ~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~  285 (292)
T d1okca_         207 HIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFV  285 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHH
T ss_pred             chHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhh
Confidence                    1111  22222334432  2333222  223356889999999999875    99999999999876 5788


Q ss_pred             HHHHHHH
Q psy10316        212 ITSYELG  218 (254)
Q Consensus       212 ~~~ye~~  218 (254)
                      |++||++
T Consensus       286 ~~~ye~l  292 (292)
T d1okca_         286 LVLYDEI  292 (292)
T ss_dssp             HHHHHTC
T ss_pred             hhHhhcC
Confidence            9999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure