Psyllid ID: psy1041

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090-----
MGMRWTPLNQWLTVVALLLPTVILTSDDIGRSSSLRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGTSLKPRLL
ccccccccEEEEEEEEEEcEEEEEEEEEccccccccccccEEEEEEEcccccccEEEEcEEEEccccccccEEEEEEEEccccccEEEEEEEEccEEEEEEEcccccccccccccccEEEEEEEEEEEcccccccccEEEEEEEEEEEEEcccccccccccEEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEcccccEEEEcccEEEEEccccccccccEEEEEEEEEEcccccccccccEEEEEEEEEEEccccccEEEEEEEccccccccccEEEEEEEEEcccccccEEEEEEEEcccccccEEEccccccccccccEEEEEEcccccccccccEEEEEEEEEEccccccEEEEEEEEEEcccccccccccccEEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEEccccccEEEEccccEEEEccccccccccEEEEEEEEEEccccccccEEEEEEEEEEEEccccccEEccccEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEEcccccEEEEccccEEEEcccccccccccEEEEEEEEEEcccccccEEEEEEEEEEEEccccccEEEcccEEEEEccccccccEEEEEEEEEcccccEEEEEEEEccccccEEEEccEEEEEEccccccccccEEEEEEEEEcccccccEEEEEEEEEEcccccccccccccccccEEEEEcccccEEEEEEEEEEcccccccccEEEEEEEEEEEEEcccccccccccEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEEccccccEEEEcccEEEEEccccccccccEEEEEEEEEEccccccEEEEEEEEEEEEccccccccccccEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEcccccEEEEcccEEEEEccccccccccEEEEEEEEEEcccccccccEEEEEEEEEEEEEccccccEEEccccEEEEccccccccEEEEEEEEEccccccEEEEEEEEEcccccccEEEEccccEEEEccccccccccEEEEEEEEEEcccccEEEEEEEEEEEEEEcccccccEEEccEEEEEEEcccccccEEEcccc
cccccccccEEEEEEEEEEEEEEEEEEEcccccccccccccEEEEEEcccccccEEEEEEEEcccccccccEEEEEEEccccccEEEEEcccccccEEEEEccccEEEEEcccccccEEEEEEEEEEccccccccccccEEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEccccEEEEccccEEEEEEcccccccccEEEEEEEEEcccccccccccEEEEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEEccccccccEEEEEEEEccccccEEEEcccccEEEEccccEEEEEEccccccccccEEEEEEEEEcccccccccEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEccccccEEEEcccccEEEEEcccccccccEEEEEEEEEccccccccccEEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccccEEEEcccccEEEEEEcccccccccEEEEEEEEEcccccccccEEEEEEEEEEEccccccccccccEEEEEEcccccccEEEEEEEEccccccEEEEEEEccccccEEEEcccccEEEEEEccccccccEEEEEEEEEccccccccEEEEEEEEEEcccccccccccccccEEEEcccccccEEEEEEEEEEcccccccccccEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccccccEEEcccccEEEEccccccccccEEEEEEEEEcccccccccEEEEEEEEEcccccccEEcccEEEEEEEcccccccEEEEccEEccccccccEEEEEEEccccEEEEcccccEEEEEcccccccccEEEEEEEEEcccccccccccccEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccccccEEEEccccEEEEEEEccccccccEEEEEEEEEcccccccEEEEEEEEEEEEccccccccccccccEEEEEccccccccEEEEEEc
mgmrwtplnQWLTVVALLLPTViltsddigrssslrftqkdynvsisensnsktyvtpeekmgiyrgtsevdirfkissgdrdkffKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATIthrdgkkasyeeTTCKVHVNvldtndlnplfypteyeetvpedlplhTSILRvsaedadlgrngeiyysfrdmneqfsihptsgvvtltrplkytdrsvhDLVVLgqdrgsvfkgggkpssaKLKIKVEQINlygpeiyvqslpdiveQSYADIYAIVRVVdrdagihgeiasldivdgdpdghfrivptkidpgtkkkeYNIVVLKLLDreiaplgynltlravdkgtppretykATQVHLvdlndnkpvfdreiyevdvpettpvntpiirlkvsdaddgkNAQVFLEIVggneggefninpetgmLYTAVTLDAEDKAFYTLTVSAIdqgnagtrkqsAAKVKVNIvdtndndplfdspemevsinenepagtsVIKVTAkdkdsgenayISYSianlkpvpfeidhfsgvikttQVLDYESMRREYILRVRasdwglpyrrQTEMQLKIKLLdvndnrpqfekvdclghvprnlpigreiitlsaidfdagnIISYRIVsgnedgcfaldITSGVLsiacdltdvrvnereinvtatdsahfsDVVRIRINLVsarripepgktlendsggfeckdtGVARRLTEVLAAAEKNNLRSQSYQEEFAmmpsrygenvhvpeffsfpielqvnesvplkSTLTKIIArdrdlgyngklvfgissgdndsvfridpdsgelkvvgyldrertseytlnitvydlgkpqkstskmlpitildvndnppkfekSLASFRVTENALNGTVIFkvnatdldlgdnAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRasdcdgrndmytLHADALVRVTIddindnapnfalpnysvkvredipvGTVVAILSasdpdlgqggvVRYTIvsdneaddvfsidrltgtirvakpldfekRQVHSLVVRakdngspplyseaTLIVEVsdvnenmnapvfsDFVYQATvkenqpigtslkprll
MGMRWTPLNQWLTVVALLLPTVILtsddigrssslrftqkdynvsisensnsktyvtpeekmgiyrgtsevdIRFKISSGDRDKFFKAEERLVGDFWFLlirtrtgntdvlnrerkdkyilhikatithrdgkkasyEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRvsaedadlGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVlgqdrgsvfkgggkpssaklKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIAsldivdgdpdGHFRivptkidpgtkkkeyNIVVLKLLDREIAPLGYNLtlravdkgtppretykatqvhlvdlndnkpVFDREIyevdvpettpvntpiirlkvsdaddgkNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAidqgnagtrkqsaakvkVNIVDTNDNDPLFDSPEMEVsinenepagtsvIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRvrasdwglpyrRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREInvtatdsahfsdvVRIRINlvsarripepgktlendsggfeCKDTGVARRLTEVLAAAeknnlrsqsYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIardrdlgyNGKLVfgissgdndsvfridpdsgelkvvgyldrertseytlnitvydlgkpqkstsKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFkvnatdldlgDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRasdcdgrnDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILsasdpdlgqggVVRYTIvsdneaddvfsidrLTGTirvakpldfekrQVHSlvvrakdngspplYSEATLIVEVSDVNENMNAPVFSDFVYQATVkenqpigtslkprll
MGMRWTPLNQWLTVVALLLPTVILTSDDIGRSSSLRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGTSLKPRLL
****WTPLNQWLTVVALLLPTVILTSDDIGR******************************MGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKG******AKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQ**********************************************************NAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRI**************ECKDTGVARRLTEVLA********************SRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGK******KMLPITILDVNDN**KFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDN**PPLYSEATLIVEVSDVNENMNAPVFSDFVYQATV***************
MGMRWTPLNQWLTVVALLLPTVILTSDDIGRSSSLRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFK*GGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEK*****QSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGTSLKPRLL
MGMRWTPLNQWLTVVALLLPTVILTSDDIGRSSSLRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQG*********AKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGTSLKPRLL
******PLNQWLTVVALLLPTVILTSDDIGRSSSLRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGTSLKPRLL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGMRWTPLNQWLTVVALLLPTVILTSDDIGRSSSLRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGTSLKPRLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1095 2.2.26 [Sep-21-2011]
Q9VW71 4705 Fat-like cadherin-related yes N/A 0.969 0.225 0.524 0.0
Q14517 4588 Protocadherin Fat 1 OS=Ho yes N/A 0.924 0.220 0.431 0.0
Q8TDW7 4589 Protocadherin Fat 3 OS=Ho no N/A 0.926 0.220 0.419 0.0
Q8BNA6 4555 Protocadherin Fat 3 OS=Mu no N/A 0.945 0.227 0.412 0.0
Q8R508 4555 Protocadherin Fat 3 OS=Ra no N/A 0.925 0.222 0.414 0.0
O88277 4351 Protocadherin Fat 2 OS=Ra no N/A 0.923 0.232 0.385 0.0
Q9NYQ8 4349 Protocadherin Fat 2 OS=Ho no N/A 0.930 0.234 0.380 0.0
Q5F226 4351 Protocadherin Fat 2 OS=Mu no N/A 0.925 0.232 0.376 0.0
Q24292 3503 Protein dachsous OS=Droso no N/A 0.824 0.257 0.291 6e-89
P33450 5147 Cadherin-related tumor su no N/A 0.884 0.188 0.295 2e-88
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila melanogaster GN=kug PE=2 SV=2 Back     alignment and function desciption
 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1101 (52%), Positives = 763/1101 (69%), Gaps = 39/1101 (3%)

Query: 10   QWLTVVA--LLLPTVILTSDDIGRSSSL------------RFTQKDYNVSISENSNSKTY 55
            QW++++    L+PTV   +D+   +++L            RF+   YNV+I ENS  KTY
Sbjct: 19   QWISLLCSLWLIPTVQSKADE-KHTATLEYRLENQLQDLYRFSHSVYNVTIPENSLGKTY 77

Query: 56   VTP--EEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERLVGDFWFLLIRTRTGNTDVLNR 113
                  E++   R     +++++I SGD++K FKAEE+LVGDF FL IRTRT N  VLNR
Sbjct: 78   AKGVLHERLAGLRVGLNAEVKYRIISGDKEKLFKAEEKLVGDFAFLAIRTRTNNV-VLNR 136

Query: 114  ERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTNDLNPLFYPTEYEETVPEDLPL 173
            E+ ++Y++ +KA +   D   +SYE T   +H+ VLD NDL+PLFYPT+Y   +PED P 
Sbjct: 137  EKTEEYVIRVKAHVHLHDRNVSSYE-TEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPK 195

Query: 174  HTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGVVTLTRPLKYTDRSVHDLVVLG 233
            + SIL+V+A+DADLG NGEIYYS    +E F+IHPT+G +TL + L+Y + S  +L V+ 
Sbjct: 196  YQSILKVTADDADLGINGEIYYSLLMDSEYFAIHPTTGEITLLQQLQYAENSHFELTVVA 255

Query: 234  QDRGS-VFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYADIYAIVRVVDRDA 292
             DRGS V     + S  K+ I V+Q+N Y PEI+ ++   +   S   IY IVRV D+D 
Sbjct: 256  YDRGSWVNHQNHQASKTKVSISVKQVNFYAPEIFTKTFSSVTPTSNPLIYGIVRVNDKDT 315

Query: 293  GIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAV 352
            GI+G I  L+IVDG+PDG F +          K EY I + +          YNLTL A 
Sbjct: 316  GINGNIGRLEIVDGNPDGTFLL-----KAAETKDEYYIELNQFAHLNQQHFIYNLTLLAE 370

Query: 353  DKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPETTPVNTPIIRLKVSDADDGKNA 412
            D GTP R  YK+  + +   + N P+F +EIYEV +PET P+N P+IRLKVSD D GKNA
Sbjct: 371  DLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVSDPDLGKNA 430

Query: 413  QVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGTRKQSAAKV 472
             V+LEIVGGNEG EF INP++GMLYTA  LDAE K+ YTLTVSAIDQ N G+RKQS+AKV
Sbjct: 431  LVYLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKV 490

Query: 473  KVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVP 532
            K+++ D NDNDP+F++    +SINEN  AG+ V+K+TAKD+DSGEN+YISYSIANL  VP
Sbjct: 491  KISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIANLNAVP 550

Query: 533  FEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQF 592
            FEIDHFSG++KTT +LD+E+M+R Y L +RASDWGLPYRRQTE++L I + D+NDNRPQF
Sbjct: 551  FEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQF 610

Query: 593  EKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVSGNEDGCFALDITSGVLSIACD 652
            E+V+C G V ++ P+G E+   SAIDFDAG+IISYR+  GNEDGCF LD TSG LSI+CD
Sbjct: 611  ERVNCYGKVTKSAPMGTEVFVTSAIDFDAGDIISYRLSDGNEDGCFNLDPTSGSLSISCD 670

Query: 653  LTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPE---PGKTLENDSGGFECKDTG 709
            L    +  R + V+ATD  HFSD + I ++L     +PE      ++ +  G FEC++TG
Sbjct: 671  LKKTTLTNRILKVSATDGTHFSDDLIINVHL-----MPEDLGGDSSILHGFGSFECRETG 725

Query: 710  VARRLTEVLAAAEKNNLRSQSYQ--EEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLK 767
            VARRL E L+ AEKNN++S S     + ++ PSRYG+NVH PEF +FP EL +NESV L 
Sbjct: 726  VARRLAETLSLAEKNNVKSASPSVFSDLSLTPSRYGQNVHRPEFVNFPQELSINESVQLG 785

Query: 768  STLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNIT 827
             T+  I A+DRDLGYNGKLVF IS GD DSVFRIDPD GEL+++GYLDRER +EY LNIT
Sbjct: 786  ETVAWIEAKDRDLGYNGKLVFAISDGDYDSVFRIDPDRGELQIIGYLDRERQNEYVLNIT 845

Query: 828  VYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLDLGD 887
            VYDLG P KSTSKMLPITILDVNDN P  +K+LA+FR+TE+A  GTV+  ++ATD D G 
Sbjct: 846  VYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSGI 905

Query: 888  NAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRNDMYTLHADA 947
            NA+V Y+L  +  DF V++ TG L ++  LDRE+QD Y L I A D         L ++A
Sbjct: 906  NAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNYALHITAKDGGSP----VLSSEA 961

Query: 948  LVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNE 1007
            LV V +DD+NDNAP F +  Y  KVRED+P GTV+A++ A D D+G    +++++  + +
Sbjct: 962  LVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQ 1021

Query: 1008 ADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMN 1067
             +++F ID+ TG IR    LD+E +QVH+L+V A D G P L S+ ++++ + DVNEN  
Sbjct: 1022 DEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRF 1081

Query: 1068 APVFSDFVYQATVKENQPIGT 1088
            AP F DFVY+  VKEN+P GT
Sbjct: 1082 APEFDDFVYEGKVKENKPKGT 1102
Required for the planar polarity of actin filament orientation at the basal side of ovarian follicle cells. Required for proper egg chamber shape; elongation of the egg chamber during oogenesis.
Drosophila melanogaster (taxid: 7227)
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2 Back     alignment and function description
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2 Back     alignment and function description
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1 Back     alignment and function description
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1 Back     alignment and function description
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2 Back     alignment and function description
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1 Back     alignment and function description
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3 Back     alignment and function description
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1095
350417212 4739 PREDICTED: fat-like cadherin-related tum 0.957 0.221 0.680 0.0
189234730 4676 PREDICTED: similar to fat2 CG7749-PA [Tr 0.981 0.229 0.670 0.0
270002748 4637 cadherin [Tribolium castaneum] 0.981 0.231 0.670 0.0
3320252721179 Putative fat-like cadherin-related tumor 0.956 0.888 0.676 0.0
383855810 4739 PREDICTED: fat-like cadherin-related tum 0.956 0.220 0.666 0.0
345497484 4817 PREDICTED: fat-like cadherin-related tum 0.956 0.217 0.660 0.0
380020280 4753 PREDICTED: LOW QUALITY PROTEIN: fat-like 0.971 0.223 0.654 0.0
3072106861079 Putative fat-like cadherin-related tumor 0.933 0.947 0.672 0.0
3287901191065 PREDICTED: fat-like cadherin-related tum 0.926 0.953 0.666 0.0
242006694 4716 protocadherin fat 2 precursor, putative 0.951 0.220 0.655 0.0
>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog, partial [Bombus impatiens] Back     alignment and taxonomy information
 Score = 1482 bits (3837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/1061 (68%), Positives = 862/1061 (81%), Gaps = 12/1061 (1%)

Query: 35   LRFTQKDYNVSISENSNSKTYVTPEEKMGIYRGT--SEVDIRFKISSGDRDKFFKAEERL 92
             RFT   YNVSI ENS  KTYV PEE+MGI   +  S +DIRF+I SGDRDKFFKAEER 
Sbjct: 56   FRFTLPLYNVSIPENSIGKTYVVPEERMGIKLASPDSNLDIRFRIMSGDRDKFFKAEERT 115

Query: 93   VGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGK-KASYEETTCKVHVNVLDT 151
            VGDF FLLIRTRTGN DVLNRERKD+Y+L ++AT+   DGK + +  E    V V +LDT
Sbjct: 116  VGDFCFLLIRTRTGNVDVLNRERKDRYVLEVRATLNKGDGKNRVTIMEADTTVVVTILDT 175

Query: 152  NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSG 211
            NDLNPLFYPTEYE T+ ED PLH SILRV AEDADLGRNGEIYYSF +  +QF++HP SG
Sbjct: 176  NDLNPLFYPTEYEATITEDTPLHRSILRVIAEDADLGRNGEIYYSFAEETDQFAVHPVSG 235

Query: 212  VVTLTRPLKYTDRSVHDLVVLGQDRGSVFKGGG--KPSSAKLKIKVEQINLYGPEIYVQS 269
            V+TLTRPL+Y++R++H+LVVL +DRG++++ GG  + S+AK+ I+V Q+NL+ PEIYV  
Sbjct: 236  VITLTRPLRYSERALHELVVLAKDRGALYRSGGTRRASTAKVTIRVRQVNLHSPEIYVHH 295

Query: 270  LPDIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYN 329
            LPDIVEQS ADIYAIVRVVD D GIHG+IASLDIV GDP GHFR+ P     G    EYN
Sbjct: 296  LPDIVEQSNADIYAIVRVVDNDEGIHGQIASLDIVGGDPAGHFRVRPAG---GPHSGEYN 352

Query: 330  IVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVP 389
            I VL LLDRE A  GYNLTLRA D+G P R +YK   VHL DLNDN PVF REIYEV VP
Sbjct: 353  IEVLHLLDRETAVQGYNLTLRATDRGVPQRYSYKFVPVHLADLNDNAPVFSREIYEVKVP 412

Query: 390  ETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAF 449
            ET P+NTP+IRLKV+DAD+GKNA VFLEIVGGNEGGEF +N ETGMLYTAV LDAE KAF
Sbjct: 413  ETAPINTPVIRLKVTDADEGKNALVFLEIVGGNEGGEFYVNAETGMLYTAVNLDAEKKAF 472

Query: 450  YTLTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVT 509
            YTLTVSA+DQGNAGTRKQS+AKVK+N+VDTNDNDP F+  EMEV I+ENEPAGTSV+K+T
Sbjct: 473  YTLTVSAVDQGNAGTRKQSSAKVKINVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKIT 532

Query: 510  AKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLP 569
            AKD+DSGENAYISYSI N++ VPFEIDHFSG++KT QVLDYE+M+REY+L VR SDWGLP
Sbjct: 533  AKDRDSGENAYISYSIDNIQKVPFEIDHFSGIVKTKQVLDYETMKREYLLHVRVSDWGLP 592

Query: 570  YRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRI 629
            YRRQ EMQL +K+ DVNDNRPQFE++DC GHVPR +PIG EIIT+SAIDFDAGNIISYRI
Sbjct: 593  YRRQAEMQLHVKVRDVNDNRPQFERIDCTGHVPRYVPIGSEIITVSAIDFDAGNIISYRI 652

Query: 630  VSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARR- 688
            VSGNEDGCFALD  SGVLS+ACDL+DV+V ER +NVTATD +HF+DV  + ++LV+A+R 
Sbjct: 653  VSGNEDGCFALDSASGVLSVACDLSDVKVTERMVNVTATDGSHFADVNPVHMHLVNAKRN 712

Query: 689  IPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHV 748
            +   G+ L + SG FEC+DTGVARRLTE +AAAE+NN+ S+   +E+A+ PSRYGEN+H 
Sbjct: 713  LGSQGRILTDQSGAFECRDTGVARRLTEAIAAAERNNMPSK--DDEYALTPSRYGENIHA 770

Query: 749  PEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSGEL 808
            PEF  FP E++ NESV + +TL KI ARDRDL YNGKLVF ISSGD DSVF IDPD+G+L
Sbjct: 771  PEFVDFPSEIKANESVKIGTTLVKIRARDRDLDYNGKLVFCISSGDRDSVFGIDPDTGDL 830

Query: 809  KVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTEN 868
             V+GYLDRER SEY LNI+VYDLGKPQKS SKMLP+TILDVNDN PKFEKSLASFR++E 
Sbjct: 831  NVIGYLDRERESEYFLNISVYDLGKPQKSASKMLPVTILDVNDNAPKFEKSLASFRISET 890

Query: 869  ALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYELK 928
            ALNGT +++ NATD DLG+NA+V YSL+T+T DF VD  TG L V   LDRERQ++YEL+
Sbjct: 891  ALNGTNVWRANATDADLGENARVTYSLVTETNDFRVDPVTGVLTVFGRLDRERQEIYELR 950

Query: 929  IRASDCDGRN-DMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSA 987
            IRA D  G+  D   L++DALVRVT+DD+NDNAP+FAL  Y+VK+RED+P+ TVVA+  A
Sbjct: 951  IRAQDNGGKGTDSPPLYSDALVRVTVDDVNDNAPSFALSTYTVKIREDVPIWTVVAVXXA 1010

Query: 988  SDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSP 1047
            +DPD   GG + Y +    E++  F +D+++GTIR  + LDFE+RQVH+L + AKD G P
Sbjct: 1011 TDPDEASGGDIEYFLSDAMESEGYFKVDKMSGTIRTTQSLDFEERQVHTLTIVAKDRGEP 1070

Query: 1048 PLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGT 1088
             L SE  +I+E+ DVNEN++APVF DFV  A+V ENQPIGT
Sbjct: 1071 SLSSETMVIIEMVDVNENLHAPVFDDFVVSASVFENQPIGT 1111

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Megachile rotundata] Back     alignment and taxonomy information
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor suppressor homolog [Apis florea] Back     alignment and taxonomy information
>gi|307210686|gb|EFN87109.1| Putative fat-like cadherin-related tumor suppressor-like protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328790119|ref|XP_624967.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform 2, partial [Apis mellifera] Back     alignment and taxonomy information
>gi|242006694|ref|XP_002424182.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis] gi|212507523|gb|EEB11444.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1095
FB|FBgn0261574 4705 kug "kugelei" [Drosophila mela 0.946 0.220 0.539 2e-296
UNIPROTKB|F1NWT2 4366 FAT2 "Uncharacterized protein" 0.693 0.173 0.395 1.4e-202
UNIPROTKB|F1NWW5 4592 FAT1 "Uncharacterized protein" 0.845 0.201 0.437 4.3e-194
UNIPROTKB|Q14517 4588 FAT1 "Protocadherin Fat 1" [Ho 0.839 0.200 0.429 1.3e-192
ZFIN|ZDB-GENE-050425-1 4611 fat1 "FAT tumor suppressor hom 0.847 0.201 0.425 3.2e-191
UNIPROTKB|E1BKL9 4587 FAT1 "Uncharacterized protein" 0.841 0.200 0.426 1.2e-189
UNIPROTKB|E2R353 4591 FAT1 "Uncharacterized protein" 0.842 0.200 0.424 1.2e-189
UNIPROTKB|F6XXM1 5056 FAT1 "Uncharacterized protein" 0.842 0.182 0.424 1.5e-189
UNIPROTKB|F1SER9 4587 FAT1 "Uncharacterized protein" 0.841 0.200 0.430 2.3e-188
UNIPROTKB|F1LP84 4586 Fat1 "Protein Fat1" [Rattus no 0.847 0.202 0.416 1e-187
FB|FBgn0261574 kug "kugelei" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 2859 (1011.5 bits), Expect = 2.0e-296, P = 2.0e-296
 Identities = 573/1062 (53%), Positives = 752/1062 (70%)

Query:    36 RFTQKDYNVSISENSNSKTY---VTPEEKMGIYRGTSEVDIRFKISSGDRDKFFKAEERL 92
             RF+   YNV+I ENS  KTY   V  E   G+  G +  +++++I SGD++K FKAEE+L
Sbjct:    58 RFSHSVYNVTIPENSLGKTYAKGVLHERLAGLRVGLN-AEVKYRIISGDKEKLFKAEEKL 116

Query:    93 VGDFWFLLIRTRTGNTDVLNRERKDKYILHIKATITHRDGKKASYEETTCKVHVNVLDTN 152
             VGDF FL IRTRT N  VLNRE+ ++Y++ +KA +   D   +SYE T   +H+ VLD N
Sbjct:   117 VGDFAFLAIRTRTNNV-VLNREKTEEYVIRVKAHVHLHDRNVSSYE-TEANIHIKVLDRN 174

Query:   153 DLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRDMNEQFSIHPTSGV 212
             DL+PLFYPT+Y   +PED P + SIL+V+A+DADLG NGEIYYS    +E F+IHPT+G 
Sbjct:   175 DLSPLFYPTQYTVVIPEDTPKYQSILKVTADDADLGINGEIYYSLLMDSEYFAIHPTTGE 234

Query:   213 VTLTRPLKYTDRSVHDLVVLGQDRGS-VFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLP 271
             +TL + L+Y + S  +L V+  DRGS V     + S  K+ I V+Q+N Y PEI+ ++  
Sbjct:   235 ITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAPEIFTKTFS 294

Query:   272 DIVEQSYADIYAIVRVVDRDAGIHGEIASLDIVDGDPDGHFRIVPTKIDPGTKKKEYNIV 331
              +   S   IY IVRV D+D GI+G I  L+IVDG+PDG F +   +      K EY I 
Sbjct:   295 SVTPTSNPLIYGIVRVNDKDTGINGNIGRLEIVDGNPDGTFLLKAAET-----KDEYYIE 349

Query:   332 VLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIYEVDVPET 391
             + +          YNLTL A D GTP R  YK+  + +   + N P+F +EIYEV +PET
Sbjct:   350 LNQFAHLNQQHFIYNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPET 409

Query:   392 TPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYT 451
              P+N P+IRLKVSD D GKNA V+LEIVGGNEG EF INP++GMLYTA  LDAE K+ YT
Sbjct:   410 APINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYT 469

Query:   452 LTVSAIDQGNAGTRKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAK 511
             LTVSAIDQ N G+RKQS+AKVK+++ D NDNDP+F++    +SINEN  AG+ V+K+TAK
Sbjct:   470 LTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAK 529

Query:   512 DKDSGENAYISYSIANLKPVPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYR 571
             D+DSGEN+YISYSIANL  VPFEIDHFSG++KTT +LD+E+M+R Y L +RASDWGLPYR
Sbjct:   530 DRDSGENSYISYSIANLNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYR 589

Query:   572 RQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNIISYRIVS 631
             RQTE++L I + D+NDNRPQFE+V+C G V ++ P+G E+   SAIDFDAG+IISYR+  
Sbjct:   590 RQTEIKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFVTSAIDFDAGDIISYRLSD 649

Query:   632 GNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPE 691
             GNEDGCF LD TSG LSI+CDL    +  R + V+ATD  HFSD + I ++L+     PE
Sbjct:   650 GNEDGCFNLDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDLIINVHLM-----PE 704

Query:   692 P-G--KTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQ--EEFAMMPSRYGENV 746
               G   ++ +  G FEC++TGVARRL E L+ AEKNN++S S     + ++ PSRYG+NV
Sbjct:   705 DLGGDSSILHGFGSFECRETGVARRLAETLSLAEKNNVKSASPSVFSDLSLTPSRYGQNV 764

Query:   747 HVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDSVFRIDPDSG 806
             H PEF +FP EL +NESV L  T+  I A+DRDLGYNGKLVF IS GD DSVFRIDPD G
Sbjct:   765 HRPEFVNFPQELSINESVQLGETVAWIEAKDRDLGYNGKLVFAISDGDYDSVFRIDPDRG 824

Query:   807 ELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLASFRVT 866
             EL+++GYLDRER +EY LNITVYDLG P KSTSKMLPITILDVNDN P  +K+LA+FR+T
Sbjct:   825 ELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT 884

Query:   867 ENALNGTVIFKVNATDLDLGDNAKVVYSLMTDTQDFAVDSATGSLYVSASLDRERQDLYE 926
             E+A  GTV+  ++ATD D G NA+V Y+L  +  DF V++ TG L ++  LDRE+QD Y 
Sbjct:   885 ESARIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNYA 944

Query:   927 LKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILS 986
             L I A D  G + +  L ++ALV V +DD+NDNAP F +  Y  KVRED+P GTV+A++ 
Sbjct:   945 LHITAKD--GGSPV--LSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIE 1000

Query:   987 ASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGS 1046
             A D D+G    +++++  + + +++F ID+ TG IR    LD+E +QVH+L+V A D G 
Sbjct:  1001 AVDEDIGPNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGD 1060

Query:  1047 PPLYSEATLIVEVSDVNENMNAPVFSDFVYQATVKENQPIGT 1088
             P L S+ ++++ + DVNEN  AP F DFVY+  VKEN+P GT
Sbjct:  1061 PSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGT 1102
GO:0048477 "oogenesis" evidence=IMP
GO:0016339 "calcium-dependent cell-cell adhesion" evidence=ISS
GO:0050839 "cell adhesion molecule binding" evidence=ISS
GO:0004872 "receptor activity" evidence=ISS
GO:0007156 "homophilic cell adhesion" evidence=IEA;ISS
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0045571 "negative regulation of imaginal disc growth" evidence=TAS
GO:0005509 "calcium ion binding" evidence=IEA
GO:0007424 "open tracheal system development" evidence=IMP
GO:0007431 "salivary gland development" evidence=IMP
GO:0007440 "foregut morphogenesis" evidence=IMP
GO:0007442 "hindgut morphogenesis" evidence=IMP
GO:0005925 "focal adhesion" evidence=IDA
GO:0042247 "establishment of planar polarity of follicular epithelium" evidence=IMP
GO:0009925 "basal plasma membrane" evidence=IDA
GO:0030950 "establishment or maintenance of actin cytoskeleton polarity" evidence=IMP
UNIPROTKB|F1NWT2 FAT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWW5 FAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q14517 FAT1 "Protocadherin Fat 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050425-1 fat1 "FAT tumor suppressor homolog 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BKL9 FAT1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R353 FAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6XXM1 FAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SER9 FAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1LP84 Fat1 "Protein Fat1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VW71FAT2_DROMENo assigned EC number0.52400.96980.2257yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1095
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 2e-33
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 9e-28
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 3e-27
pfam0002892 pfam00028, Cadherin, Cadherin domain 2e-26
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 4e-25
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 5e-25
smart0011281 smart00112, CA, Cadherin repeats 5e-25
smart0011281 smart00112, CA, Cadherin repeats 1e-23
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 2e-20
smart0011281 smart00112, CA, Cadherin repeats 5e-20
pfam0002892 pfam00028, Cadherin, Cadherin domain 2e-19
smart0011281 smart00112, CA, Cadherin repeats 4e-19
pfam0002892 pfam00028, Cadherin, Cadherin domain 8e-19
pfam0002892 pfam00028, Cadherin, Cadherin domain 5e-18
pfam0002892 pfam00028, Cadherin, Cadherin domain 6e-18
smart0011281 smart00112, CA, Cadherin repeats 1e-17
pfam0002892 pfam00028, Cadherin, Cadherin domain 2e-14
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 1e-12
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 2e-11
smart0011281 smart00112, CA, Cadherin repeats 4e-11
smart0011281 smart00112, CA, Cadherin repeats 6e-11
pfam0002892 pfam00028, Cadherin, Cadherin domain 2e-07
pfam0002892 pfam00028, Cadherin, Cadherin domain 5e-07
cd1130498 cd11304, Cadherin_repeat, Cadherin tandem repeat d 5e-06
smart0011281 smart00112, CA, Cadherin repeats 4e-04
cd0003198 cd00031, CA_like, Cadherin repeat-like domain 0.002
smart0011281 smart00112, CA, Cadherin repeats 0.004
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information 
 Score =  123 bits (312), Expect = 2e-33
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)

Query: 968  YSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTGTIRVAKPL 1027
            Y V V E+ P GTVV  +SA+DPD G+ G V Y+IVS NE D +FSID  TG I  AKPL
Sbjct: 2    YEVSVPENAPPGTVVLTVSATDPDSGENGEVTYSIVSGNE-DGLFSIDPSTGEITTAKPL 60

Query: 1028 DFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNEN 1065
            D E++  ++L V A D G PPL S AT+ + V DVN+N
Sbjct: 61   DREEQSSYTLTVTATDGGGPPLSSTATVTITVLDVNDN 98

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Length = 98
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain Back     alignment and domain information
>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information
>gnl|CDD|206635 cd00031, CA_like, Cadherin repeat-like domain Back     alignment and domain information
>gnl|CDD|214520 smart00112, CA, Cadherin repeats Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1095
KOG4289|consensus 2531 100.0
KOG1219|consensus 4289 100.0
KOG4289|consensus 2531 100.0
KOG1219|consensus 4289 100.0
cd00031199 CA Cadherin repeat domain; Cadherins are glycoprot 99.97
cd00031199 CA Cadherin repeat domain; Cadherins are glycoprot 99.96
KOG1834|consensus 952 99.67
PF0002893 Cadherin: Cadherin domain; InterPro: IPR002126 Cad 99.65
PF0002893 Cadherin: Cadherin domain; InterPro: IPR002126 Cad 99.63
KOG1834|consensus 952 99.56
smart0011279 CA Cadherin repeats. Cadherins are glycoproteins i 99.54
smart0011279 CA Cadherin repeats. Cadherins are glycoproteins i 99.51
PF0875890 Cadherin_pro: Cadherin prodomain like; InterPro: I 96.32
PF0826684 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cad 96.23
PF0875890 Cadherin_pro: Cadherin prodomain like; InterPro: I 96.1
TIGR0196599 VCBS_repeat VCBS repeat. This domain of about 100 95.94
PF0826684 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cad 95.8
TIGR0196599 VCBS_repeat VCBS repeat. This domain of about 100 95.33
smart0073697 CADG Dystroglycan-type cadherin-like domains. Cadh 94.97
smart0073697 CADG Dystroglycan-type cadherin-like domains. Cadh 94.75
PF13750158 Big_3_3: Bacterial Ig-like domain (group 3) 94.7
TIGR00864 2740 PCC polycystin cation channel protein. Note: this 93.96
PF13750158 Big_3_3: Bacterial Ig-like domain (group 3) 93.42
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 89.52
TIGR00845 928 caca sodium/calcium exchanger 1. This model is spe 83.96
PF0534549 He_PIG: Putative Ig domain; InterPro: IPR008009 Th 83.83
PF0534549 He_PIG: Putative Ig domain; InterPro: IPR008009 Th 83.5
PF05895 624 DUF859: Siphovirus protein of unknown function (DU 80.02
>KOG4289|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.3e-130  Score=1131.12  Aligned_cols=824  Identities=34%  Similarity=0.523  Sum_probs=770.3

Q ss_pred             CCCCCCCCCCceEEEeeCCCCCCcEEEEEEeeeCCCCCCeEEEEEEec-----CCccEEEEccccEEEEccCCCcCCCcE
Q psy1041         152 NDLNPLFYPTEYEETVPEDLPLHTSILRVSAEDADLGRNGEIYYSFRD-----MNEQFSIHPTSGVVTLTRPLKYTDRSV  226 (1095)
Q Consensus       152 NDn~P~F~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~l~~-----~~~~F~id~~tG~i~~~~~ld~e~~~~  226 (1095)
                      .-|+|.|.+..|...++||.|.||.|++|+|.|+|.   +++.|++..     ..+.|+||+.+|.|++.+.||||....
T Consensus       158 ~~~~~~Fqq~~Yq~~lpEn~pagT~iasv~A~~~~a---~rl~Ysm~al~dsRS~~lFslD~~sG~irta~~lDREt~e~  234 (2531)
T KOG4289|consen  158 AANAVQFQQPNYQKELPENEPAGTIIASVKASDPDA---GRLYYSMVALFDSRSQNLFSLDPMSGAIRTAKSLDRETKET  234 (2531)
T ss_pred             CCCCccCCCcchhccCcCCCCCCceeEEEEecCCCc---CceEEEeeeccchhccccEeeccccccchhhhhhhhhhhhe
Confidence            457899999999999999999999999999999995   469999974     357899999999999999999999999


Q ss_pred             EEEEEEEeecCccccCCCCcceEEEEEEEEeccCCcCeeEEeecCcccccCCcc--EEEEEEEEeCCCCCCCeEEEEEee
Q psy1041         227 HDLVVLGQDRGSVFKGGGKPSSAKLKIKVEQINLYGPEIYVQSLPDIVEQSYAD--IYAIVRVVDRDAGIHGEIASLDIV  304 (1095)
Q Consensus       227 ~~l~V~A~D~g~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~~~~~~~~--~~~~v~a~D~D~g~n~~v~~~~i~  304 (1095)
                      |.|+|+|.|.|.|    .+|++++|+|.|.|.|||.|+|.+..|.....|..+.  .+-.++|+|.|++.|+.+. |+++
T Consensus       235 HvlrVtA~d~~~P----~~SAtttv~V~V~D~nDhsPvFEq~~Y~e~lREn~evGy~vLtvrAtD~Dsp~Nani~-Yrl~  309 (2531)
T KOG4289|consen  235 HVLRVTAQDHGDP----RRSATTTVTVLVLDTNDHSPVFEQDEYREELRENLEVGYEVLTVRATDGDSPPNANIR-YRLL  309 (2531)
T ss_pred             eEEEEEeeecCCC----cccceeEEEEEEeecCCCCcccchhHHHHHHhhccccCceEEEEEeccCCCCCCCceE-EEec
Confidence            9999999999988    7899999999999999999999998887766665543  5678899999999999997 6899


Q ss_pred             cCCCCCCeEEeeeccCCCCcCceEEEEECccccccCCCCceEEEEEEEECCCCCeeeEEEEEEEeccCCCCCCCccCCcE
Q psy1041         305 DGDPDGHFRIVPTKIDPGTKKKEYNIVVLKLLDREIAPLGYNLTLRAVDKGTPPRETYKATQVHLVDLNDNKPVFDREIY  384 (1095)
Q Consensus       305 ~g~~~~~F~i~~~~~~~~~~~g~~~i~~~~~lD~E~~~~~y~l~v~a~D~g~p~~~s~~~~~i~v~d~Nd~~P~F~~~~~  384 (1095)
                      .|+....|+|++.       +|  .|.+..+||||.... |+|.|.|+|.|.|+.-.++.+.|+|.|.|||+|+|....|
T Consensus       310 eg~~~~~f~in~r-------SG--vI~T~a~lDRE~~~~-y~L~VeAsDqG~~pgp~Ta~V~itV~D~NDNaPqFse~~Y  379 (2531)
T KOG4289|consen  310 EGNAKNVFEINPR-------SG--VISTRAPLDREELES-YQLDVEASDQGRPPGPRTAMVEITVEDENDNAPQFSEKRY  379 (2531)
T ss_pred             CCCccceeEEcCc-------cc--eeeccCccCHHhhhh-eEEEEEeccCCCCCCCceEEEEEEEEecCCCCccccccce
Confidence            9988899999987       67  699999999999876 9999999999999877788999999999999999999999


Q ss_pred             EEEEeCCCCCCceEEEEEEeeCCCCCCceEEEEEEeCCCCCcEEEECCccEEEEceecCcccccEEEEEEEEEeCCCCCC
Q psy1041         385 EVDVPETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVTLDAEDKAFYTLTVSAIDQGNAGT  464 (1095)
Q Consensus       385 ~~~v~E~~~~g~~v~~v~a~D~D~g~n~~i~ysi~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~  464 (1095)
                      .+.|.|+..+++.|++|+|+|.|.|.|+.+.|+|.+|+..|.|.||..||+|.+..+||+|.. .|++.|+|.|+|.|+ 
T Consensus       380 vvqv~Edvt~~avvlrV~AtDrD~g~Ng~VHYsi~Sgn~~G~f~id~~tGel~vv~plD~e~~-~ytl~IrAqDggrPp-  457 (2531)
T KOG4289|consen  380 VVQVREDVTPPAVVLRVTATDRDKGTNGKVHYSIASGNGRGQFYIDSLTGELDVVEPLDFENS-EYTLRIRAQDGGRPP-  457 (2531)
T ss_pred             EEEecccCCCCceEEEEEecccCCCcCceEEEEeeccCccccEEEecccceEEEeccccccCC-eeEEEEEcccCCCCC-
Confidence            999999999999999999999999999999999999999999999999999999999999998 999999999999875 


Q ss_pred             ceeeeEEEEEEEeecCCCCCcccCCccEEEEeecCCCCcEEEEEEEeeCCCCCCceEEEEEecCCCCCcEEecccceEEE
Q psy1041         465 RKQSAAKVKVNIVDTNDNDPLFDSPEMEVSINENEPAGTSVIKVTAKDKDSGENAYISYSIANLKPVPFEIDHFSGVIKT  544 (1095)
Q Consensus       465 ~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~V~E~~~~gt~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~  544 (1095)
                       ++.+.-+.|.|+|+|||+|.|...++.++|-||.+.|..++.++|.|+|+|.|+.+.|++.+.  ++|.|+..+|+|++
T Consensus       458 -Lsn~sgl~iqVlDINDhaPifvstpfq~tvlEnv~lg~~v~~vqaidadsg~na~l~y~laG~--~pf~I~~~SG~Itv  534 (2531)
T KOG4289|consen  458 -LSNTSGLVIQVLDINDHAPIFVSTPFQATVLENVPLGYLVCHVQAIDADSGENARLHYSLAGV--GPFQINNGSGWITV  534 (2531)
T ss_pred             -ccCCCceEEEEEecCCCCceeEechhhhhhhhcccccceEEEEecccCCCCcccceeeeeccC--CCeeEecCCceEEE
Confidence             677777889999999999999999999999999999999999999999999999999999974  58999999999999


Q ss_pred             ceeccccccccEEEEEEEEEECCcCCceeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCCCe
Q psy1041         545 TQVLDYESMRREYILRVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAGNI  624 (1095)
Q Consensus       545 ~~~lD~E~~~~~~~l~V~a~D~g~p~~~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~~~  624 (1095)
                      ++.||||+. ..|.|.|+|+|+|.|+. ++.+.|.|+++|+|||.|.|++..|...+.|+++.|+.|++|+|+|.|....
T Consensus       535 tk~ldrEt~-~~ysl~V~ard~gtp~l-~tstsI~Vtv~dvndndP~Ft~~eytl~inED~pvgsSI~tvtAvD~d~~s~  612 (2531)
T KOG4289|consen  535 TKELDRETV-EHYSLGVEARDHGTPPL-STSTSISVTVLDVNDNDPTFTQKEYTLRINEDAPVGSSIVTVTAVDRDANSV  612 (2531)
T ss_pred             eeccccccc-ceEEEEEEEcCCCCCcc-cccceEEEEecccCCCCCccccCceEEEecCCccccceEEEEEEeccccccc
Confidence            999999994 78999999999999875 5779999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCcEEEeCCC--cEEEEeeccCcccccEEEEEEEEecCCCccceEEEEEEEeecccCCCCCccccCCCCC
Q psy1041         625 ISYRIVSGNEDGCFALDITS--GVLSIACDLTDVRVNEREINVTATDSAHFSDVVRIRINLVSARRIPEPGKTLENDSGG  702 (1095)
Q Consensus       625 i~y~i~~~~~~~~F~Id~~t--G~i~~~~~ld~~~~~~~~l~V~atD~~~~s~~~~v~I~v~~~~~~~~~~~~~~~~~~~  702 (1095)
                      ++|.|.+++....|.|+...  |.|+++.++++....+|.+.|+|+| |...+...++|.                    
T Consensus       613 ityqi~g~ntrn~Fsi~si~g~Glitlalp~dkKqe~~~vl~vtAtD-g~l~d~~~V~v~--------------------  671 (2531)
T KOG4289|consen  613 ITYQITGGNTRNRFSISSIGGGGLITLALPLDKKQERQYVLAVTATD-GTLQDTCSVNVN--------------------  671 (2531)
T ss_pred             eEEEecCCcccccceeeccCCcceEEeecchhhcccceEEEEEEecC-CccccceEEEEE--------------------
Confidence            99999999988999999876  7899999999999999999999999 445566666553                    


Q ss_pred             eEEeeccceeeeehhhhhhhhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCCCCC
Q psy1041         703 FECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGY  782 (1095)
Q Consensus       703 ~~~~~t~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D~g~  782 (1095)
                                                            |.|.|-++|.|...+|.++|+|..|.|+.|.+++|+|.|.|.
T Consensus       672 --------------------------------------I~danThrpvFqs~pfTvsI~e~rP~G~tvvtlsasd~D~ge  713 (2531)
T KOG4289|consen  672 --------------------------------------ITDANTHRPVFQSSPFTVSINEDRPLGTTVVTLSASDEDTGE  713 (2531)
T ss_pred             --------------------------------------eeecccCCcccccCCeeEeeccCCcCCceeEEEecccCCCCc
Confidence                                                  467888999999999999999999999999999999999999


Q ss_pred             CcEEEEEEEeCCCCCcEEEeCCceEEEEcccCCccCCCEEEEEEEEEECCCCCCceeEEEEEEEEecCCCCCcccccceE
Q psy1041         783 NGKLVFGISSGDNDSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPPKFEKSLAS  862 (1095)
Q Consensus       783 n~~v~y~i~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~  862 (1095)
                      |++|+|-+ .   +..|+||+++|.+++...||||.+-.|.+.++|.|.|.|+++.+++|.|.|.|+|||+|+|..+.|.
T Consensus       714 NARI~y~l-e---d~~Frid~dsg~i~t~~~ld~edqvtytl~itA~D~~~pq~adtttveV~v~diNDnaPqf~assyt  789 (2531)
T KOG4289|consen  714 NARITYIL-E---DEAFRIDPDSGAIYTQAELDYEDQVTYTLAITARDNGIPQKADTTTVEVLVNDINDNAPQFLASSYT  789 (2531)
T ss_pred             cceEEEEe-c---ccceeecCCCCceEEeeeeecccceeeEeeeeecCCCCCCcCccEEEEEEeecccccCcccchhhce
Confidence            99999944 3   3459999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC---cceEEeCCcceEEEcccccccccCeeEEEEEEEeCCCCCC
Q psy1041         863 FRVTENALNGTVIFKVNATDLDLGDNAKVVYSLMTDT---QDFAVDSATGSLYVSASLDRERQDLYELKIRASDCDGRND  939 (1095)
Q Consensus       863 ~~V~En~~~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~---~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~A~D~~g~~~  939 (1095)
                      ++|.|++|++|.|++|+|+|+|.|.|+.+.|.+.++.   +.|.|++.+|.|++...||||....|.|.+.|+|.+    
T Consensus       790 ~sV~Ed~Pv~TsvlQVSatDaD~g~Ng~v~y~~qg~~d~p~~F~IEptSGviRtl~rLdRE~~avy~L~a~avDrg----  865 (2531)
T KOG4289|consen  790 GSVFEDAPVFTSVLQVSATDADSGPNGRVYYTFQGGDDGPGDFYIEPTSGVIRTLRRLDRENVAVYVLAAYAVDRG----  865 (2531)
T ss_pred             eEeecCCCCcceEEEEEEeccCCCCCceEEEEecCCCCCCCceEEccCcceeehhhhhcchheeEEEEEEEEeeCC----
Confidence            9999999999999999999999999999999997653   899999999999999999999999999999999999    


Q ss_pred             CcceeEEEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCceEEEEEEeCCCCCCCEEEeCCce
Q psy1041         940 MYTLHADALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRLTG 1019 (1095)
Q Consensus       940 ~~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~v~Y~i~~~~~~~~~F~Id~~tG 1019 (1095)
                      .|++++.+.|+|+|.|+|||||+|.+..|...|.||.++|..+++++|.|+|+|+|+.|+|+|.+++ ....|.++...|
T Consensus       866 ~p~ls~~~eItvtvldvNDnaPvfe~~e~e~~I~enspvgs~va~i~a~dpdEG~NA~IsYqIvgg~-d~~~fq~de~~~  944 (2531)
T KOG4289|consen  866 NPPLSAPVEITVTVLDVNDNAPVFEQDELELFIEENSPVGSVVALITADDPDEGPNAHISYQIVGGN-DPELFQLDEFSG  944 (2531)
T ss_pred             CCCcCCceEEEEEEEecCCCCCCCCCcceeeEEeecCccceeeEEEEccCCCcCCcceEEEeeccCc-cHHHHHHHHhhh
Confidence            7789999999999999999999999999999999999999999999999999999999999999965 478999999999


Q ss_pred             EEEEcccCCCC-CCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCeeec
Q psy1041        1020 TIRVAKPLDFE-KRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSD 1073 (1095)
Q Consensus      1020 ~i~~~~~ld~E-~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P~F~~ 1073 (1095)
                      +|.....|||| ....|.+.++|+-   -|+.+.+++.|+|.|.|||  +|....
T Consensus       945 ~lla~~efdyef~~~eyv~~~qats---~plvS~atv~i~vsd~ndn--~pvl~~  994 (2531)
T KOG4289|consen  945 ELLALVEFDYEFTRVEYVLVVQATS---APLVSRATVHIRVSDQNDN--PPVLED  994 (2531)
T ss_pred             hhhhheeehhhhccceeeEEeeccc---cccccceeEEEEecccCCC--chhhcc
Confidence            99999999999 7889999999864   3589999999999999999  777543

>KOG1219|consensus Back     alignment and domain information
>KOG4289|consensus Back     alignment and domain information
>KOG1219|consensus Back     alignment and domain information
>cd00031 CA Cadherin repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion; these domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium; plays a role in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-,CNR-,proto-,and FAT-family cadherin, desmocollin, and desmoglein, exists as monomers or dimers (hetero- and homo-); two copies of the repeat are present here Back     alignment and domain information
>cd00031 CA Cadherin repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion; these domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium; plays a role in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-,CNR-,proto-,and FAT-family cadherin, desmocollin, and desmoglein, exists as monomers or dimers (hetero- and homo-); two copies of the repeat are present here Back     alignment and domain information
>KOG1834|consensus Back     alignment and domain information
>PF00028 Cadherin: Cadherin domain; InterPro: IPR002126 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>PF00028 Cadherin: Cadherin domain; InterPro: IPR002126 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>KOG1834|consensus Back     alignment and domain information
>smart00112 CA Cadherin repeats Back     alignment and domain information
>smart00112 CA Cadherin repeats Back     alignment and domain information
>PF08758 Cadherin_pro: Cadherin prodomain like; InterPro: IPR014868 Cadherins are a group of proteins that mediate calcium dependent cell-cell adhesion Back     alignment and domain information
>PF08266 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>PF08758 Cadherin_pro: Cadherin prodomain like; InterPro: IPR014868 Cadherins are a group of proteins that mediate calcium dependent cell-cell adhesion Back     alignment and domain information
>TIGR01965 VCBS_repeat VCBS repeat Back     alignment and domain information
>PF08266 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,] Back     alignment and domain information
>TIGR01965 VCBS_repeat VCBS repeat Back     alignment and domain information
>smart00736 CADG Dystroglycan-type cadherin-like domains Back     alignment and domain information
>smart00736 CADG Dystroglycan-type cadherin-like domains Back     alignment and domain information
>PF13750 Big_3_3: Bacterial Ig-like domain (group 3) Back     alignment and domain information
>TIGR00864 PCC polycystin cation channel protein Back     alignment and domain information
>PF13750 Big_3_3: Bacterial Ig-like domain (group 3) Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins Back     alignment and domain information
>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins Back     alignment and domain information
>PF05895 DUF859: Siphovirus protein of unknown function (DUF859); InterPro: IPR008577 This entry is represented by Streptococcus phage 7201, Orf39 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1095
2a62_A322 Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length 6e-28
2a62_A322 Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length 3e-13
3mvs_A210 Structure Of The N-Terminus Of Cadherin 23 Length = 1e-27
3mvs_A210 Structure Of The N-Terminus Of Cadherin 23 Length = 2e-19
3mvs_A210 Structure Of The N-Terminus Of Cadherin 23 Length = 2e-04
2wcp_A214 Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length 3e-27
2wcp_A214 Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length 2e-19
2wcp_A214 Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length 2e-04
4aqe_A214 Crystal Structure Of Deafness Associated Mutant Mou 8e-27
4aqe_A214 Crystal Structure Of Deafness Associated Mutant Mou 2e-19
4aqe_A214 Crystal Structure Of Deafness Associated Mutant Mou 6e-04
2wd0_A214 Crystal Structure Of Nonsyndromic Deafness (Dfnb12) 1e-26
2wd0_A214 Crystal Structure Of Nonsyndromic Deafness (Dfnb12) 1e-18
3q2w_A 559 Crystal Structure Of Mouse N-Cadherin Ectodomain Le 5e-25
3q2v_A550 Crystal Structure Of Mouse E-Cadherin Ectodomain Le 9e-23
3ubh_A419 Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le 6e-18
3ubh_A419 Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le 4e-15
3ubh_A419 Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le 3e-14
1l3w_A546 C-Cadherin Ectodomain Length = 546 1e-17
1q55_A 880 W-Shaped Trans Interactions Of Cadherins Model Base 1e-17
1edh_A226 E-Cadherin Domains 1 And 2 In Complex With Calcium 9e-16
1edh_A226 E-Cadherin Domains 1 And 2 In Complex With Calcium 3e-11
3lnd_A207 Crystal Structure Of Cadherin-6 Ec12 W4a Length = 2 1e-15
3lnd_A207 Crystal Structure Of Cadherin-6 Ec12 W4a Length = 2 6e-10
3lnd_A207 Crystal Structure Of Cadherin-6 Ec12 W4a Length = 2 4e-07
2a4e_A215 Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length 3e-15
2a4e_A215 Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length 1e-13
2a4e_A215 Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length 4e-07
1ff5_A219 Structure Of E-Cadherin Double Domain Length = 219 2e-14
1ff5_A219 Structure Of E-Cadherin Double Domain Length = 219 4e-10
2o72_A213 Crystal Structure Analysis Of Human E-Cadherin (1-2 3e-14
2o72_A213 Crystal Structure Analysis Of Human E-Cadherin (1-2 1e-08
2qvi_A215 Crystal Structure Of N-Cadherin Domains Ec12 Length 4e-14
2qvi_A215 Crystal Structure Of N-Cadherin Domains Ec12 Length 9e-10
1ncj_A215 N-Cadherin, Two-Domain Fragment Length = 215 5e-14
1ncj_A215 N-Cadherin, Two-Domain Fragment Length = 215 4e-10
3k5s_A217 Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Len 1e-12
3k5s_A217 Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Len 6e-06
3q2n_A213 Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 1e-11
3q2n_A213 Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 3e-08
3lni_A213 Crystal Structure Of E-Cadherin Ec12 E89a Length = 1e-11
3lni_A213 Crystal Structure Of E-Cadherin Ec12 E89a Length = 2e-08
1q1p_A212 E-Cadherin Activation Length = 212 1e-11
1q1p_A212 E-Cadherin Activation Length = 212 2e-08
2qvf_B213 Mouse E-cadherin Domains 1,2 Length = 213 1e-11
2qvf_B213 Mouse E-cadherin Domains 1,2 Length = 213 2e-08
3lne_A213 Crystal Structure Of E-Cadherin Ec12 K14e Length = 1e-11
3lne_A213 Crystal Structure Of E-Cadherin Ec12 K14e Length = 2e-08
3lng_A215 Crystal Structure Of E-Cadherin Ec12 Aa Extension L 1e-11
3lng_A215 Crystal Structure Of E-Cadherin Ec12 Aa Extension L 3e-08
3lnf_A213 Crystal Structure Of E-Cadherin Ec12 K14ew2a Length 2e-11
3lnf_A213 Crystal Structure Of E-Cadherin Ec12 K14ew2a Length 3e-08
3lnh_A213 Crystal Structure Of E-Cadherin Ec12 W2a Length = 2 2e-11
3lnh_A213 Crystal Structure Of E-Cadherin Ec12 W2a Length = 2 3e-08
3ubf_A316 Crystal Structure Of Drosophila N-Cadherin Ec1-3, I 2e-11
3ppe_A203 Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Leng 2e-11
3ppe_A203 Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Leng 2e-09
3k5r_A218 Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Lengt 3e-11
3k5r_A218 Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Lengt 3e-07
3q2l_A213 Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 4e-11
3q2l_A213 Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 2e-08
2ee0_A114 Solution Structures Of The Ca Domain Of Human Proto 7e-11
2ee0_A114 Solution Structures Of The Ca Domain Of Human Proto 1e-09
3qrb_A213 Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Lengt 9e-11
3qrb_A213 Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Lengt 3e-08
2yst_A119 Solution Structure Of The Third Cadherin Domain Fro 7e-08
2yst_A119 Solution Structure Of The Third Cadherin Domain Fro 2e-07
2wbx_A102 Crystal Structure Of Mouse Cadherin-23 Ec1 Length = 3e-07
1suh_A146 Amino-Terminal Domain Of Epithelial Cadherin In The 4e-07
4apx_B242 Crystal Structure Of Mouse Cadherin-23 Ec1-2 And Pr 1e-05
1nch_A110 Structural Basis Of Cell-Cell Adhesion By Cadherins 3e-04
>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322 Back     alignment and structure 
Iteration: 1

 Score =  123 bits (308), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 149/284 (52%), Gaps = 15/284 (5%)
Query: 779  DLGYNGKLVFGISSGDN-DSVFRIDPDSGELKVVGYLDRERTSEYTLNITVYDL--GKPQ 835
            DL    K +  I SGD   ++F+I+  +G++  +  LDRE  +EYTL     D    KP 
Sbjct: 27   DLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPL 86
Query: 836  KSTSKMLPITILDVNDNPPKFEKSLASFRVTENALNGTVIFKVNATDLD---LGDNAKVV 892
            +  S+ + I + D+NDN P+F        V E ++ GT +  V ATD D    G++AK+V
Sbjct: 87   EPPSEFI-IKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLV 145
Query: 893  YSLMTDTQDFAVDSATGSLYVS-ASLDRERQDLYELKIRASDCDGRNDMYTLHADALVRV 951
            YS++     F+++  T  +  +  ++DRE ++ Y + I+A D  G +    L     + V
Sbjct: 146  YSILEGQPYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSG--GLSGTTTLTV 203
Query: 952  TIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDV 1011
            T+ D+NDN P FA   Y   V ED+ +GT +  + A+D D+G+     Y I+ D +   +
Sbjct: 204  TLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDII-DGDGTAL 262
Query: 1012 FSI----DRLTGTIRVAKPLDFEKRQVHSLVVRAKDNGSPPLYS 1051
            F I        G IR+ KPLDFE ++ ++L V A +    P +S
Sbjct: 263  FEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFS 306
>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322 Back     alignment and structure
>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210 Back     alignment and structure
>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210 Back     alignment and structure
>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210 Back     alignment and structure
>pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I Length = 214 Back     alignment and structure
>pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I Length = 214 Back     alignment and structure
>pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I Length = 214 Back     alignment and structure
>pdb|2WD0|A Chain A, Crystal Structure Of Nonsyndromic Deafness (Dfnb12) Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|2WD0|A Chain A, Crystal Structure Of Nonsyndromic Deafness (Dfnb12) Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2 Length = 214 Back     alignment and structure
>pdb|3Q2W|A Chain A, Crystal Structure Of Mouse N-Cadherin Ectodomain Length = 559 Back     alignment and structure
>pdb|3Q2V|A Chain A, Crystal Structure Of Mouse E-Cadherin Ectodomain Length = 550 Back     alignment and structure
>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419 Back     alignment and structure
>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419 Back     alignment and structure
>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419 Back     alignment and structure
>pdb|1L3W|A Chain A, C-Cadherin Ectodomain Length = 546 Back     alignment and structure
>pdb|1Q55|A Chain A, W-Shaped Trans Interactions Of Cadherins Model Based On Fitting C- Cadherin (1l3w) To 3d Map Of Desmosomes Obtained By Electron Tomography Length = 880 Back     alignment and structure
>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium Length = 226 Back     alignment and structure
>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium Length = 226 Back     alignment and structure
>pdb|3LND|A Chain A, Crystal Structure Of Cadherin-6 Ec12 W4a Length = 207 Back     alignment and structure
>pdb|3LND|A Chain A, Crystal Structure Of Cadherin-6 Ec12 W4a Length = 207 Back     alignment and structure
>pdb|3LND|A Chain A, Crystal Structure Of Cadherin-6 Ec12 W4a Length = 207 Back     alignment and structure
>pdb|2A4E|A Chain A, Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length = 215 Back     alignment and structure
>pdb|2A4E|A Chain A, Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length = 215 Back     alignment and structure
>pdb|2A4E|A Chain A, Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length = 215 Back     alignment and structure
>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain Length = 219 Back     alignment and structure
>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain Length = 219 Back     alignment and structure
>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213 Back     alignment and structure
>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213 Back     alignment and structure
>pdb|2QVI|A Chain A, Crystal Structure Of N-Cadherin Domains Ec12 Length = 215 Back     alignment and structure
>pdb|2QVI|A Chain A, Crystal Structure Of N-Cadherin Domains Ec12 Length = 215 Back     alignment and structure
>pdb|1NCJ|A Chain A, N-Cadherin, Two-Domain Fragment Length = 215 Back     alignment and structure
>pdb|1NCJ|A Chain A, N-Cadherin, Two-Domain Fragment Length = 215 Back     alignment and structure
>pdb|3K5S|A Chain A, Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Length = 217 Back     alignment and structure
>pdb|3K5S|A Chain A, Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Length = 217 Back     alignment and structure
>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 Back     alignment and structure
>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213 Back     alignment and structure
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213 Back     alignment and structure
>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213 Back     alignment and structure
>pdb|1Q1P|A Chain A, E-Cadherin Activation Length = 212 Back     alignment and structure
>pdb|1Q1P|A Chain A, E-Cadherin Activation Length = 212 Back     alignment and structure
>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2 Length = 213 Back     alignment and structure
>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2 Length = 213 Back     alignment and structure
>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e Length = 213 Back     alignment and structure
>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e Length = 213 Back     alignment and structure
>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension Length = 215 Back     alignment and structure
>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension Length = 215 Back     alignment and structure
>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a Length = 213 Back     alignment and structure
>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a Length = 213 Back     alignment and structure
>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a Length = 213 Back     alignment and structure
>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a Length = 213 Back     alignment and structure
>pdb|3UBF|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-3, I Length = 316 Back     alignment and structure
>pdb|3PPE|A Chain A, Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Length = 203 Back     alignment and structure
>pdb|3PPE|A Chain A, Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Length = 203 Back     alignment and structure
>pdb|3K5R|A Chain A, Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Length = 218 Back     alignment and structure
>pdb|3K5R|A Chain A, Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Length = 218 Back     alignment and structure
>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 Back     alignment and structure
>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213 Back     alignment and structure
>pdb|2EE0|A Chain A, Solution Structures Of The Ca Domain Of Human Protocadherin 9 Length = 114 Back     alignment and structure
>pdb|2EE0|A Chain A, Solution Structures Of The Ca Domain Of Human Protocadherin 9 Length = 114 Back     alignment and structure
>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Length = 213 Back     alignment and structure
>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Length = 213 Back     alignment and structure
>pdb|2YST|A Chain A, Solution Structure Of The Third Cadherin Domain From Human Protocadherin 7 Length = 119 Back     alignment and structure
>pdb|2YST|A Chain A, Solution Structure Of The Third Cadherin Domain From Human Protocadherin 7 Length = 119 Back     alignment and structure
>pdb|2WBX|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1 Length = 102 Back     alignment and structure
>pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The Calcium Bound State, Nmr, 20 Structures Length = 146 Back     alignment and structure
>pdb|4APX|B Chain B, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And Protocadherin-15 Ec1-2 Form I Length = 242 Back     alignment and structure
>pdb|1NCH|A Chain A, Structural Basis Of Cell-Cell Adhesion By Cadherins Length = 110 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1095
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 1e-103
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 3e-87
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 1e-86
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 6e-84
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 5e-65
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 2e-48
1l3w_A 546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 1e-95
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 1e-90
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 1e-89
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 9e-87
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 2e-81
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 2e-69
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 3e-12
3q2w_A 559 Cadherin-2; cell adhesion, calcium binding; HET: M 2e-94
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 4e-93
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 2e-82
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 5e-74
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 2e-73
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 2e-58
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 9e-44
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 4e-94
3q2v_A 550 Cadherin-1; cell adhesion, calcium binding; HET: M 1e-93
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 8e-85
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 3e-83
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 5e-72
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 2e-56
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 2e-42
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 2e-92
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 4e-81
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 3e-80
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 9e-80
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 3e-71
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 9e-65
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 2e-54
3ubh_A 419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 1e-52
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 8e-28
3ubh_A 419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 5e-25
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 6e-89
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 2e-61
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 8e-61
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 1e-60
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 3e-54
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 2e-46
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 2e-37
2a62_A 322 Cadherin-8; extracellular domain, homodimer, calci 5e-31
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 1e-27
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 7e-85
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 4e-69
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 3e-55
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 6e-55
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 3e-50
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 2e-49
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 2e-31
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 2e-30
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 7e-27
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 1e-18
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 6e-68
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 2e-66
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 2e-65
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 2e-43
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 5e-40
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 1e-38
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 1e-34
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 2e-04
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 2e-58
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 2e-54
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 2e-52
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-43
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-35
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 2e-33
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-29
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 5e-22
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 1e-06
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 7e-56
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 6e-54
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 1e-48
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 1e-32
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 1e-31
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 2e-31
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 3e-27
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 5e-24
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 1e-22
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 4e-06
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 3e-55
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 2e-50
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 1e-44
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 8e-41
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 7e-35
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 3e-34
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 5e-26
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 6e-16
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 2e-04
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 2e-54
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 6e-51
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 2e-45
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 3e-38
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 4e-32
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 5e-32
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 1e-30
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 7e-17
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 1e-04
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 2e-54
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 1e-49
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 9e-47
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 2e-42
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 4e-37
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 1e-34
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 3e-25
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 9e-13
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 3e-54
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 1e-50
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 2e-45
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 6e-39
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 3e-36
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 3e-33
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 2e-24
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 8e-20
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 5e-15
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 5e-04
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 2e-53
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 1e-52
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 2e-48
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 5e-40
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 2e-34
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 2e-33
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 3e-30
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 1e-15
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 7e-05
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 1e-38
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 2e-35
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 1e-31
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 1e-30
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 2e-26
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 5e-23
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 4e-09
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 2e-08
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 7e-07
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 1e-35
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 1e-29
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 2e-27
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 2e-27
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 5e-26
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 4e-17
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 2e-09
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 8e-07
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 7e-28
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 3e-24
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 3e-24
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 4e-24
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 9e-21
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 2e-13
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 1e-12
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 5e-04
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 2e-27
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 2e-25
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 6e-24
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 3e-22
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 8e-22
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 8e-14
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 2e-11
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 8e-04
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 1e-24
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 2e-22
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 7e-19
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 5e-18
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 3e-15
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 2e-12
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 2e-09
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 1e-05
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 1e-22
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 2e-20
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 3e-18
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 5e-18
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 3e-16
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 1e-11
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 1e-09
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 3e-05
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 9e-22
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 5e-18
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 2e-17
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 2e-17
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 2e-15
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 8e-10
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 3e-06
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 2e-20
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 3e-20
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 3e-17
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 3e-16
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 2e-14
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 1e-10
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 6e-09
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 1e-04
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 2e-20
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 6e-18
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 2e-15
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 1e-14
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 4e-14
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 6e-11
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 2e-18
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 1e-15
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 1e-14
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 1e-13
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 2e-12
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 2e-08
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 8e-09
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 4e-06
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1wuz_A103 Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p 3e-06
1op4_A159 Neural-cadherin; beta sandwich, cadherin-like doma 1e-04
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
 Score =  343 bits (881), Expect = e-103
 Identities = 124/554 (22%), Positives = 206/554 (37%), Gaps = 75/554 (13%)

Query: 560  RVRASDWGLPYRRQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPR-NLPIGREIITLSAID 618
            R+R +   L         +     DV+  +P F   + +  V R  L  GR++  ++  D
Sbjct: 5    RLRNASVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSD 64

Query: 619  FDAGNIISYRIVSGNEDGCFALDITSGVLSIACDLTDVRVNEREINVTATDSAHFSDVVR 678
                    Y +        F +    G + +   +   +  +  I+         S  + 
Sbjct: 65   CTTRKHGLYDVGDSR----FRVL-PDGTVLVKRHVKLHKDTKFTISTWDARGIKHSTNIA 119

Query: 679  IRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLAAAEKNNLRSQSYQEEFAMM 738
            +        R  E   +  +                  VL   E +    +         
Sbjct: 120  V---ASKRHRSGEEAHSRSSK---------------LPVLTFPETHTGLKRKK------- 154

Query: 739  PSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRDLGYNGKLVFGISSGDNDS- 797
                       ++   PI++  NE  P    L +I     +     K+ + I+    D+ 
Sbjct: 155  ----------RDWVIPPIKVSENERGPFPKRLVQI---KSNKDRFNKVYYSITGQGADNP 201

Query: 798  ---VFRIDPDSGELKVVGYLDRERTSEYTLNITVYDLGKPQKSTSKMLPITILDVNDNPP 854
               VFRI+ ++G + V   LDRE   +Y L+                + I ++D NDN P
Sbjct: 202  PQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRP 261

Query: 855  KFEKSLASFRVTENALNGTVIFKVNATDLD---LGDNAKVVYSLMTDTQD------FAVD 905
            KF + +    V E    GT +  V+ATD D      N  + YS++    +      F ++
Sbjct: 262  KFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTIN 321

Query: 906  SATGSLYVSAS-LDRERQDLYELKIRASDCDGRNDMYTLHADALVRVTIDDINDNAPNFA 964
              TG + +  + LDRE+   Y L ++A+D +G      L  +    + I D NDNAP F 
Sbjct: 322  RETGVISLIGTGLDREKFPEYTLTVQATDLEGA----GLSVEGKAIIQITDANDNAPIFD 377

Query: 965  LPNYSVKVREDIPVGTVVAILSASDPDLGQ-GGVVRYTIVSDNEADDVFSI----DRLTG 1019
               Y+  V E+  +G  V  LS +D D+           +  NE    F+I    +   G
Sbjct: 378  PKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNE-GGFFNITTDPESNQG 435

Query: 1020 TIRVAKPLDFEKRQVHSLVVRAKD---NGSPPLYSEATLIVEVSDVNENMNAPVFSDFVY 1076
             +  AK LDFE R+ + L +  ++      P   S AT+ V V DVNE    P F   V 
Sbjct: 436  ILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNEA---PFFVPAVS 492

Query: 1077 QATVKENQPIGTSL 1090
            +  V E+   G  +
Sbjct: 493  RVDVSEDLSRGEKI 506
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98 Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Length = 125 Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Length = 125 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus} Length = 103 Back     alignment and structure
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1 Length = 159 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1095
1q55_A 880 EP-cadherin, C-cadherin; trans interaction, desmos 100.0
1q55_A880 EP-cadherin, C-cadherin; trans interaction, desmos 100.0
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 100.0
3q2w_A559 Cadherin-2; cell adhesion, calcium binding; HET: M 100.0
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 100.0
3q2v_A550 Cadherin-1; cell adhesion, calcium binding; HET: M 100.0
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 100.0
1l3w_A546 EP-cadherin, C-cadherin; cell adhesion, calcium bi 100.0
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 100.0
3ubh_A419 Neural-cadherin; cell adhesion; 2.70A {Drosophila 100.0
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 100.0
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 100.0
2a62_A322 Cadherin-8; extracellular domain, homodimer, calci 100.0
3ubf_A316 Neural-cadherin; cell adhesion; 2.50A {Drosophila 100.0
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 100.0
3mvs_A210 Cadherin-23, otocadherin; adhesion, extracellular 100.0
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 100.0
2a4e_A215 Cadherin-11; dimer, calcium binding, cell adhesion 100.0
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 100.0
2x2u_A246 Proto-oncogene tyrosine-protein kinase receptor RE 100.0
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 100.0
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 100.0
2qvi_A215 Cadherin-2; beta barrel, strand SWAP, domain SWAP, 100.0
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 100.0
3ppe_A203 Vascular endothelial cadherin; extracellular cadhe 100.0
3qrb_A213 Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu 100.0
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 100.0
3lnd_A207 CDH6 protein, cadherin 6; cell adhesion, cell memb 100.0
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 100.0
3k5r_A218 Cadherin 13; mouse, structural protein; 2.00A {Mus 100.0
4apx_B242 Protocadherin-15, otocadherin; cell adhesion, hear 99.97
4apx_B242 Protocadherin-15, otocadherin; cell adhesion, hear 99.96
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 99.92
2yst_A119 Protocadherin-7; BH-PCDH, beta-sandwich, structura 99.92
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 99.89
2ee0_A114 Protocadherin-9; Ca domain, structural genomics, N 99.89
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 99.83
2yqg_A123 Desmoglein-2, HDGC; cadherin, structural genomics, 99.82
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 99.77
1ncg_A110 N-cadherin; cell adhesion protein; 2.10A {Mus musc 99.76
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 99.68
1zvn_A99 Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal 99.68
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 99.67
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 99.67
1zxk_A98 Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu 99.67
1wyj_A125 Protocadherin beta 14; SS bond, structural genomic 99.66
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 99.63
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 99.61
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 99.61
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 99.61
3k6d_A99 T-cadherin; cell adhesion; 1.80A {Xenopus laevis} 99.59
2omz_B105 Epithelial-cadherin; leucine-rich-repeat, nvasion 99.58
3k6i_A99 T-cadherin; cell adhesion, alternative splicing, c 99.57
3k6f_A100 T-cadherin; cell adhesion, calcium, cell membrane, 99.57
1wuz_A103 Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p 99.29
1wuz_A103 Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p 99.26
3pdd_A190 Glycoside hydrolase, family 9; CBHA, beta-sandwich 95.09
3pdd_A190 Glycoside hydrolase, family 9; CBHA, beta-sandwich 94.19
3rb5_A298 Na/Ca exchange protein; CBD12, calcium binding and 93.59
2yhg_A437 SDE_182CT, cellulose-binding protein; hydrolase, g 91.87
3rb5_A298 Na/Ca exchange protein; CBD12, calcium binding and 85.21
1op4_A159 Neural-cadherin; beta sandwich, cadherin-like doma 84.37
2kpn_A103 Bacillolysin; solution structure, BIG_3 domain, PF 83.32
1op4_A159 Neural-cadherin; beta sandwich, cadherin-like doma 80.42
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Back     alignment and structure
Probab=100.00  E-value=6.1e-89  Score=859.29  Aligned_cols=617  Identities=21%  Similarity=0.280  Sum_probs=444.9

Q ss_pred             EEEEEEeccCCCCCCCccCCcEEEEEe-CCCCCCceEEEEEEeeCCCCCCceEEEEEEeCCCCCcEEEECCccEEEEcee
Q psy1041         363 KATQVHLVDLNDNKPVFDREIYEVDVP-ETTPVNTPIIRLKVSDADDGKNAQVFLEIVGGNEGGEFNINPETGMLYTAVT  441 (1095)
Q Consensus       363 ~~~~i~v~d~Nd~~P~F~~~~~~~~v~-E~~~~g~~v~~v~a~D~D~g~n~~i~ysi~~~~~~~~F~Id~~tG~i~~~~~  441 (1095)
                      +...+.+.|+|||+|+|.+..|.+.|+ |+.++|+.|++|+|+|.|.  |+.++|++.    .+.|.|++ +|.|+++++
T Consensus        21 q~~~~~~~d~ndn~P~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D~--n~~i~Y~~~----~~~F~Id~-~G~i~~~~~   93 (880)
T 1q55_A           21 QVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCTT--RKHGLYDVG----DSRFRVLP-DGTVLVKRH   93 (880)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hheeeecccccCCCCccCCCeEEEEechhhCCCCCEEEEEEEEeCCC--CceEEEEeC----CCCEEECC-CceEEECCc
Confidence            456677899999999999999999999 9999999999999999983  778999984    34899998 799999999


Q ss_pred             cCcccccEEEEEEEEEeCCCCCCceeeeEEEEEE-Eeec----------CCCCCcccCCcc------------EEEEeec
Q psy1041         442 LDAEDKAFYTLTVSAIDQGNAGTRKQSAAKVKVN-IVDT----------NDNDPLFDSPEM------------EVSINEN  498 (1095)
Q Consensus       442 LD~E~~~~y~l~V~a~D~g~~~~~~~~~~~v~I~-V~Dv----------NDn~P~f~~~~~------------~~~V~E~  498 (1095)
                      ||||..  |.|+|+|+|++.+    ...+.|.|. |.+.          |+++|.|....|            .++|+||
T Consensus        94 Ld~e~~--~~l~V~A~D~~~~----~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En  167 (880)
T 1q55_A           94 VKLHKD--TKFTISTWDARGI----KHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSEN  167 (880)
T ss_dssp             --------------------------------------------------------------------CCCCCCEEEESS
T ss_pred             cccccc--eEEEEEEEcCCCC----eEEEEEEEEEecccccccccccccccCcccccccccccceeeccccccceEEeCC
Confidence            999987  9999999998632    344556666 3332          556789987643            5899999


Q ss_pred             CC--CCcEEEEEEEeeCCCCCCceEEEEEecCCC-----CCcEEecccceEEEceeccccccccEEEEEEEEEECCcCCc
Q psy1041         499 EP--AGTSVIKVTAKDKDSGENAYISYSIANLKP-----VPFEIDHFSGVIKTTQVLDYESMRREYILRVRASDWGLPYR  571 (1095)
Q Consensus       499 ~~--~gt~v~~v~A~D~D~g~n~~i~ysi~~~~~-----~~F~Id~~tG~i~~~~~lD~E~~~~~~~l~V~a~D~g~p~~  571 (1095)
                      .+  .+..++++.+ |.|  .++.++|+|.+...     +.|.|++.+|.|++.+.||||. ...|.|+|+|+|+|+|. 
T Consensus       168 ~~~~~~~~v~~v~~-d~d--~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~-~~~y~l~v~A~D~g~~~-  242 (880)
T 1q55_A          168 ERGPFPKRLVQIKS-NKD--RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE-YDKYVLSSHAVSENGSP-  242 (880)
T ss_dssp             CCSSSCEEEEECCC-SGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTT-CCEEEEEEEEEESSSCB-
T ss_pred             CCCCCCeEEEEEee-CCC--CCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccc-cCccEEEEEEEECCCCc-
Confidence            97  4667777764 444  68899999987542     4799999999999999999998 57999999999998765 


Q ss_pred             eeeEEEEEEEEEeCCCCCCcccccceEEEecCCCCCCcEEEEEEEEeCCCC-----CeEEEEEEeCC----CCCcEEEeC
Q psy1041         572 RQTEMQLKIKLLDVNDNRPQFEKVDCLGHVPRNLPIGREIITLSAIDFDAG-----NIISYRIVSGN----EDGCFALDI  642 (1095)
Q Consensus       572 ~s~~~~v~I~V~dvNDn~P~f~~~~~~~~V~E~~~~g~~v~~v~A~D~D~~-----~~i~y~i~~~~----~~~~F~Id~  642 (1095)
                      ++..+.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.+     ..++|+|.+++    ..+.|.|++
T Consensus       243 ~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~  322 (880)
T 1q55_A          243 VEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINR  322 (880)
T ss_dssp             CSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECT
T ss_pred             eeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEcc
Confidence            356689999999999999999999999999999999999999999999998     37999999876    457999999


Q ss_pred             CCcEEEEe-eccCcccccEEEEEEEEecCCCcc--ceEEEEEEEeecccCCCCCccccCCCCCeEEeeccceeeeehhhh
Q psy1041         643 TSGVLSIA-CDLTDVRVNEREINVTATDSAHFS--DVVRIRINLVSARRIPEPGKTLENDSGGFECKDTGVARRLTEVLA  719 (1095)
Q Consensus       643 ~tG~i~~~-~~ld~~~~~~~~l~V~atD~~~~s--~~~~v~I~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~l~  719 (1095)
                      .||.|++. +.||+|....|.|+|.|+|++++.  ..+.++|                                      
T Consensus       323 ~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I--------------------------------------  364 (880)
T 1q55_A          323 ETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII--------------------------------------  364 (880)
T ss_dssp             TTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEE--------------------------------------
T ss_pred             CCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEE--------------------------------------
Confidence            99999995 789999999999999999987543  3333333                                      


Q ss_pred             hhhhcccccccccceeeeccccccccCCCCccccCcEEEEEecCCCCCcEEEEEEEEeCC--CCCCcEEEEEEEeCCCCC
Q psy1041         720 AAEKNNLRSQSYQEEFAMMPSRYGENVHVPEFFSFPIELQVNESVPLKSTLTKIIARDRD--LGYNGKLVFGISSGDNDS  797 (1095)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~v~dvNd~~P~f~~~~~~~~v~E~~~~g~~v~~v~A~D~D--~g~n~~v~y~i~~g~~~~  797 (1095)
                                          .|.|+|||+|.|....|.+.|+|+ +.|+.|++|.|+|+|  .|.|+.++|+|.+ +..+
T Consensus       365 --------------------~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~  422 (880)
T 1q55_A          365 --------------------QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGG  422 (880)
T ss_dssp             --------------------EEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTS
T ss_pred             --------------------EEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCc
Confidence                                468999999999999999999999 999999999999999  7889999999988 7778


Q ss_pred             cEEEe--C--CceEEEEcccCCccCCCEEEEEEEEEECC---CCCCceeEEEEEEEEecCCCCCcccccceEEEEecCCC
Q psy1041         798 VFRID--P--DSGELKVVGYLDRERTSEYTLNITVYDLG---KPQKSTSKMLPITILDVNDNPPKFEKSLASFRVTENAL  870 (1095)
Q Consensus       798 ~F~Id--~--~tG~i~~~~~LD~E~~~~y~l~V~a~D~g---~p~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~  870 (1095)
                      +|.|+  +  .+|.|++.++||||....|.|+|+|+|++   .|.++++++|+|+|.|+|| +|+|.+..|.+.|+||.+
T Consensus       423 ~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~  501 (880)
T 1q55_A          423 FFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLS  501 (880)
T ss_dssp             CEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCC
T ss_pred             eEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCC
Confidence            99995  3  57999999999999999999999999987   3567899999999999999 999999999999999999


Q ss_pred             CCeEEEEEEEEeCCCCCCceEEEEecCCC-cceEEeCCcceEEEccccccccc----CeeEEEEEEEeCCCCCCCcceeE
Q psy1041         871 NGTVIFKVNATDLDLGDNAKVVYSLMTDT-QDFAVDSATGSLYVSASLDRERQ----DLYELKIRASDCDGRNDMYTLHA  945 (1095)
Q Consensus       871 ~gt~v~~v~A~D~D~g~n~~v~Ysl~~~~-~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~A~D~~g~~~~~~~~~  945 (1095)
                      +|+.|++|+|+|+|.|.|+.++|+|.++. ++|.||+.+|.|++.++||||..    ..|+|+|.|+|++    .+++++
T Consensus       502 ~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g----~p~~ss  577 (880)
T 1q55_A          502 RGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDG----VSVGTG  577 (880)
T ss_dssp             SSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECS----SSCCCC
T ss_pred             CCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEECC----CCCcEe
Confidence            99999999999999999999999998764 89999999999999999999997    8999999999998    567899


Q ss_pred             EEEEEEEEeccCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCCCCce-EEEEEEeCCCCCCCEEE--eCCceEEE
Q psy1041         946 DALVRVTIDDINDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGV-VRYTIVSDNEADDVFSI--DRLTGTIR 1022 (1095)
Q Consensus       946 ~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-v~Y~i~~~~~~~~~F~I--d~~tG~i~ 1022 (1095)
                      +++|+|+|.|+|||+|+|...  ...|.|+.+.|+ +  |.|+|+|.|.|+. ++|+|..+.  ...|.|  +..+|.|+
T Consensus       578 t~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~-v--v~A~D~D~~~n~~~~~ysl~~~~--~~~f~i~~~g~~~~l~  650 (880)
T 1q55_A          578 TGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS--DLTWKAELDSKGTSML  650 (880)
T ss_dssp             CEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS--SSSCBCCBCTTSSEEE
T ss_pred             EEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCe-E--EEEecCCCCCCCceEEEEECCCC--CCCeEEEcccceeEEE
Confidence            999999999999999999844  678999999997 3  9999999999986 899998732  457887  44455776


Q ss_pred             EcccCCCCCCCEEEEEEEEEECCCCCceeEEEEEEEEEecCCCCCCCeeecc
Q psy1041        1023 VAKPLDFEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSDVNENMNAPVFSDF 1074 (1095)
Q Consensus      1023 ~~~~ld~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~dvNdn~~~P~F~~~ 1074 (1095)
                      +. .+|+|..+.|.|.|.|+|+|.  ++++++|+|+|.|+|||  +|.|...
T Consensus       651 ~~-~~d~~~~~~y~l~V~a~D~g~--lsst~tv~V~V~d~nd~--~~~~~~~  697 (880)
T 1q55_A          651 LS-PTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVCSCEGK--AIKCQEK  697 (880)
T ss_dssp             EB-CSSCCCSSCBCCEEECCSSSC--CCEEEECCEEECSCSSS--CCCCC--
T ss_pred             ec-cCccccCCEEEEEEEEEECCc--ceeeEEEEEEEEecCCC--ccccccc
Confidence            54 558999999999999999998  89999999999999997  7888654
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Back     alignment and structure
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Back     alignment and structure
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Back     alignment and structure
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Back     alignment and structure
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Back     alignment and structure
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Back     alignment and structure
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A Back     alignment and structure
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Back     alignment and structure
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Back     alignment and structure
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Back     alignment and structure
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Back     alignment and structure
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Back     alignment and structure
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Back     alignment and structure
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Back     alignment and structure
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Back     alignment and structure
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B* Back     alignment and structure
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B* Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Back     alignment and structure
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Back     alignment and structure
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Back     alignment and structure
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Back     alignment and structure
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Back     alignment and structure
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Back     alignment and structure
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Back     alignment and structure
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Back     alignment and structure
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus} Back     alignment and structure
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus} Back     alignment and structure
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A Back     alignment and structure
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A Back     alignment and structure
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A Back     alignment and structure
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans} Back     alignment and structure
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A Back     alignment and structure
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1 Back     alignment and structure
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579} Back     alignment and structure
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1095
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 8e-21
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 3e-15
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 6e-15
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 3e-13
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 7e-12
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 4e-09
d1l3wa4107 b.1.6.1 (A:327-433) C-cadherin ectodomain {African 1e-04
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 5e-18
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 2e-12
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 1e-10
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 4e-10
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 2e-09
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 1e-05
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 2e-05
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 4e-05
d1l3wa2113 b.1.6.1 (A:101-213) C-cadherin ectodomain {African 3e-04
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 6e-18
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 2e-12
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 3e-12
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 3e-10
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 3e-08
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 3e-06
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 5e-06
d1edha2112 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse 2e-05
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 3e-16
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 2e-12
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 1e-11
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 5e-10
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 9e-07
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 1e-06
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 2e-04
d1l3wa3113 b.1.6.1 (A:214-326) C-cadherin ectodomain {African 0.003
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 5e-16
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 1e-12
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 6e-12
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 6e-12
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 1e-06
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 2e-06
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 2e-04
d1ncja2114 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu 3e-04
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 6e-16
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 2e-11
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 7e-11
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 2e-10
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 5e-10
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 1e-08
d2omzb1104 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human 5e-04
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 1e-15
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 5e-12
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 1e-10
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 1e-10
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 1e-09
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 2e-08
d1l3wa1100 b.1.6.1 (A:1-100) C-cadherin ectodomain {African c 4e-05
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 7e-15
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 3e-10
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 2e-09
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 2e-09
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 7e-09
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 4e-07
d1ncia_102 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 0.003
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 1e-14
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 3e-12
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 6e-11
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 2e-10
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 4e-07
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 9e-07
d1op4a_136 b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu 0.002
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 4e-10
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 5e-10
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 3e-08
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 1e-07
d1l3wa5107 b.1.6.1 (A:434-540) C-cadherin ectodomain {African 2e-05
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 86.6 bits (213), Expect = 8e-21
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 958  DNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLGQGGVVRYTIVSDNEADDVFSIDRL 1017
            + AP F      V V ED+  G  +  L A DPD  Q   + Y I +D       ++++ 
Sbjct: 1    NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPA--RWLTVNKD 58

Query: 1018 TGTIRVAKPLDFE----KRQVHSLVVRAKDNGSPPLYSEATLIVEVSDV 1062
             G +     LD E    K   +++++   D+G        TLI+ V DV
Sbjct: 59   NGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1095
d1l3wa2113 C-cadherin ectodomain {African clawed frog (Xenopu 99.78
d1edha2112 E-cadherin (epithelial) {Mouse (Mus musculus) [Tax 99.78
d1l3wa4107 C-cadherin ectodomain {African clawed frog (Xenopu 99.77
d1edha2112 E-cadherin (epithelial) {Mouse (Mus musculus) [Tax 99.75
d1l3wa4107 C-cadherin ectodomain {African clawed frog (Xenopu 99.74
d1l3wa2113 C-cadherin ectodomain {African clawed frog (Xenopu 99.74
d1ncja2114 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.72
d1ncja2114 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.71
d1op4a_136 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.7
d1op4a_136 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.69
d1l3wa3113 C-cadherin ectodomain {African clawed frog (Xenopu 99.66
d1l3wa3113 C-cadherin ectodomain {African clawed frog (Xenopu 99.61
d1l3wa5107 C-cadherin ectodomain {African clawed frog (Xenopu 99.54
d1l3wa5107 C-cadherin ectodomain {African clawed frog (Xenopu 99.49
d2omzb1104 E-cadherin (epithelial) {Human (Homo sapiens) [Tax 99.46
d1l3wa1100 C-cadherin ectodomain {African clawed frog (Xenopu 99.46
d1ncia_102 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.44
d1l3wa1100 C-cadherin ectodomain {African clawed frog (Xenopu 99.44
d1ncia_102 N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 99.43
d2omzb1104 E-cadherin (epithelial) {Human (Homo sapiens) [Tax 99.41
d1u2ca1103 Dystroglycan, N-terminal domain {Mouse (Mus muscul 90.23
d1u2ca1103 Dystroglycan, N-terminal domain {Mouse (Mus muscul 90.1
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.78  E-value=1.8e-19  Score=167.30  Aligned_cols=106  Identities=35%  Similarity=0.498  Sum_probs=96.9

Q ss_pred             cCCCCCeeecCceEEEEeCCCCCCcEEEEEEEEcCCCC---CCceEEEEEEeCCC---CCCCEEEeCCceEEEEc-ccCC
Q psy1041         956 INDNAPNFALPNYSVKVREDIPVGTVVAILSASDPDLG---QGGVVRYTIVSDNE---ADDVFSIDRLTGTIRVA-KPLD 1028 (1095)
Q Consensus       956 vNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~v~Y~i~~~~~---~~~~F~Id~~tG~i~~~-~~ld 1028 (1095)
                      .|||+|+|.+..|.+.|+|++++|+.|+++.|+|+|.|   .|+.++|+|..+..   ...+|.|++.||.|++. ++||
T Consensus         1 eNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~~n~~i~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~LD   80 (113)
T d1l3wa2           1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLD   80 (113)
T ss_dssp             CSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCC
T ss_pred             CCCCCCccCCCeEEEEEECCCCCCCEEEEEEeecccccccccceEEEEEEecCCCCccccceeeeeecceeEEEeccccC
Confidence            49999999999999999999999999999999999976   57889999987532   24689999999999985 5799


Q ss_pred             CCCCCEEEEEEEEEECCCCCceeEEEEEEEEEe
Q psy1041        1029 FEKRQVHSLVVRAKDNGSPPLYSEATLIVEVSD 1061 (1095)
Q Consensus      1029 ~E~~~~~~l~V~A~D~g~p~ls~~~~v~I~V~d 1061 (1095)
                      ||....|.|+|+|+|.|+|+++++++|.|+|.|
T Consensus        81 ~E~~~~y~l~V~a~D~~~~~~~~~~~v~I~V~D  113 (113)
T d1l3wa2          81 REKFPEYTLTVQATDLEGAGLSVEGKAIIQITD  113 (113)
T ss_dssp             TTTCCEEEEEEEEEHHHHTSCEEECCEEEEEEC
T ss_pred             cccCCEEEEEEEEEECCCCCcEEEEEEEEEEEC
Confidence            999999999999999999999999999999987
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Back     information, alignment and structure
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u2ca1 b.1.6.2 (A:58-160) Dystroglycan, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u2ca1 b.1.6.2 (A:58-160) Dystroglycan, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure