Psyllid ID: psy10432

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Protein Sequence
MNSERGEKTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEKDLQMSQKDESFIT
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHcccccccccc
Coil and Loop (DISEMBL)
mnsergektnmEFKRLQVRYFIPFFLatfsdwiqgpyvykvykdygydekNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADilnlgpiapfavaIPFLLGSTLFIYFcweehydpktakssllpnsmfsslkflftnpclltLGIVQSIYEGIMYTFIFVWTpvlevlspplglvFSCFMISIMIGSKIYSILILkyfkpetmLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVgmycpvtgylrgriipekARATITNWLRVPTNFITCFTLIFIKnedaeggkliAIHSVFVVCTACLLVALLASCVFKRLYlsrkyscesekdlqmsqkdesfit
Flexible Loop (DISEMBL)
mnsergektnmefKRLQVRYFIPFFLAtfsdwiqgPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKyscesekdlqmsqkdesfit
Low Complexity Region (SEG)
MNSERGEKTNMEFKRLQVRYFIPFFLATFSDWIQgpyvykvykdygydEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLAtfsitvstvltsslfDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFvvctacllvallascvFKRLYLSRKYSCESEKDLQMSQKDESFIT
Disordered region (IsUnstruct)
************FKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYS******************
Disordered Region (DISOPRED)
*************KRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYF**********************SLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF****************************
Disordered Region (DISEMBL)
*********NMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSC*****************
Disordered Region (DISPRO)
********TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYL***********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSERGEKTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEKDLQMSQKDESFIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	440	2.2.26 [Sep-21-2011]
Q6N075	450	Major facilitator superfa	no	N/A	0.879	0.86	0.385	4e-77
Q921Y4	450	Major facilitator superfa	yes	N/A	0.879	0.86	0.375	8e-76
Q0VC03	450	Major facilitator superfa	yes	N/A	0.879	0.86	0.385	4e-75
Q5R542	450	Major facilitator superfa	yes	N/A	0.879	0.86	0.388	3e-74
Q1KKV8	480	Major facilitator superfa	N/A	N/A	0.9	0.825	0.352	1e-67
Q6DG19	481	Major facilitator superfa	yes	N/A	0.888	0.812	0.340	4e-63
Q08B29	451	Major facilitator superfa	N/A	N/A	0.931	0.909	0.337	6e-62
Q28E13	452	Major facilitator superfa	yes	N/A	0.931	0.907	0.337	1e-59

>sp|Q6N075|MFSD5_HUMAN Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5 PE=2 SV=2

 Score =  289 bits (739), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 155/402 (38%), Positives = 251/402 (62%), Gaps = 15/402 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F R Q+ ++  +FLA  +DW+Q PY+YK+Y+ Y + E  IA+LY+ G AS+++FG+
Sbjct: 34  SNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGL 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           V  S+ D  GRK  C+ + + Y+LCCLTK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct: 94  VASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EW+  TFARA F + + A+V+G  A   A  + LGP+APF  AIP L  
Sbjct: 154 HEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLAL 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           +       W E+YD + A S     +    L+ L ++  +L LG +Q+++E +++ F+F+
Sbjct: 214 AGALALRNWGENYDRQRAFS----RTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFL 269

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVS 306
           WTPVL+    PLG++FS FM + ++GS +Y I   K  + +P  +L+L V +  FS+ + 
Sbjct: 270 WTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFML 329

Query: 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
           T  TS   +     S    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RVP
Sbjct: 330 TFSTSPGQE-----SPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVP 384

Query: 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408
            + + C  L+ + + D + G      ++F +C+A +++ALLA
Sbjct: 385 LHSLACLGLLVLHDSDRKTGT----RNMFSICSAVMVMALLA 422

Homo sapiens (taxid: 9606)

>sp|Q921Y4|MFSD5_MOUSE Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1

 Score =  284 bits (727), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 151/402 (37%), Positives = 249/402 (61%), Gaps = 15/402 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F + Q+ ++  +FLA  +DW+Q PY+YK+Y+ Y + E  IA+LY+ G AS+++FG+
Sbjct: 34  SNPSFLQFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGL 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           V  S+ D  GRK  C+ + + Y+LCC+TK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct: 94  VASSLVDWLGRKKSCVLFSLTYSLCCITKLSQDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EW+  TFARA F + + A+ +G  A   A  + LGP+APF  AIP L  
Sbjct: 154 HEHVERHDFPAEWIPATFARAAFWNHVLAVAAGVAAEAVASWIGLGPVAPFVAAIPLLAL 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           +       W E+YD + A S     +    L+ L ++  +L LG++Q+++E +++ F+F+
Sbjct: 214 TGALALRNWGENYDRQRAFS----KTCAGGLRCLLSDRRVLLLGVIQALFESVIFIFVFL 269

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVS 306
           WTPVL+    PLG+VFS FM + ++GS +Y I   K  + +P  +L+L V +  FS+ + 
Sbjct: 270 WTPVLDPHGAPLGIVFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFML 329

Query: 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
           T  TS   +     +    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RVP
Sbjct: 330 TFSTSPGQE-----NPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVP 384

Query: 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408
            + + C  L+ + + D + G      ++F +C+A ++  LLA
Sbjct: 385 LHLLACLGLLVLHDSDRKTGT----RNMFSICSAVMVTTLLA 422

Mus musculus (taxid: 10090)

>sp|Q0VC03|MFSD5_BOVIN Major facilitator superfamily domain-containing protein 5 OS=Bos taurus GN=MFSD5 PE=2 SV=1

 Score =  282 bits (721), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 155/402 (38%), Positives = 250/402 (62%), Gaps = 15/402 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F R Q+ ++  +FLA  +DW+Q PY+YK+Y+ Y + E  IA+LY+ G AS+++FG+
Sbjct: 34  SNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEAQIAILYVCGLASTVLFGL 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           V  S+ D  GRK  C+ + + Y+LCCLTK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct: 94  VASSLVDWLGRKKSCVLFSLTYSLCCLTKLSRDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EHL  + FP EW+  TFARA F + + A+ +G  A   A  + LGP+APF  AIP L  
Sbjct: 154 HEHLERHDFPTEWIPATFARAAFWNHVLAVAAGVAAEAVACWMGLGPVAPFVAAIPLLAL 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           +       W E+YD + A S     +    L+ L ++  +L LG +Q+++E +++ F+F+
Sbjct: 214 AGALALHNWGENYDRQRAFS----RTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFL 269

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVS 306
           WTPVL+    PLG++FS FM + ++GS +Y I   K  + +P  +L+L V +  FS+ + 
Sbjct: 270 WTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFML 329

Query: 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
           T  TS   +     S    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RVP
Sbjct: 330 TFSTSPGQE-----SPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVP 384

Query: 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408
            + + C  L+ + + D + G      ++F +C+A +++ALLA
Sbjct: 385 LHLLACLGLLVLHDSDRKTGT----RNMFSICSAVMVMALLA 422

Bos taurus (taxid: 9913)

>sp|Q5R542|MFSD5_PONAB Major facilitator superfamily domain-containing protein 5 OS=Pongo abelii GN=MFSD5 PE=2 SV=1

 Score =  279 bits (713), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 156/402 (38%), Positives = 251/402 (62%), Gaps = 15/402 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F R Q+ ++  +FLA  +DW+Q PY+YK+Y+ Y + E  IA+LY+ G AS+++FG+
Sbjct: 34  SNPSFLRSQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGL 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           V  S+ D  GRK  C+ + + Y+LCCLTK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct: 94  VASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EW+  TFARA F + + A+V+G  A   A  + LGP+APF  AIP L  
Sbjct: 154 HEHVERHDFPTEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLAL 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           +       W E+YD + A S     +    L+ L ++  +L LG +Q+++E +++ F+F+
Sbjct: 214 AGALALRNWGENYDRQRAFS----RTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFL 269

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVS 306
           WTPVL+    PLG+VFS FM + ++GS +Y I   K  + +P  +L+L V +  FS+ + 
Sbjct: 270 WTPVLDPHGAPLGIVFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFML 329

Query: 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
           T  TS   +     S    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RVP
Sbjct: 330 TFSTSPGQE-----SPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVP 384

Query: 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408
            + + C  L+ + + D + G      ++F +C+A +++ALLA
Sbjct: 385 LHLLACLGLLVLHDSDRKTGT----RNMFSICSAVMVMALLA 422

Pongo abelii (taxid: 9601)

>sp|Q1KKV8|MFSD5_TAKRU Major facilitator superfamily domain-containing protein 5 OS=Takifugu rubripes GN=mfsd5 PE=3 SV=1

 Score =  257 bits (656), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/434 (35%), Positives = 243/434 (55%), Gaps = 38/434 (8%)

Query: 4   ERGEKTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASS 63
           E     N  F+R Q  +   + LA ++DW+QGPY+YK+Y+ Y + E  IA+LY+ G AS 
Sbjct: 30  ESSAAVNPAFRRFQATFLRAYLLALWADWLQGPYLYKLYRHYSFLESQIAILYVCGLASC 89

Query: 64  MIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGF 123
           ++F    G ++   GR+ +CI + + Y  CCLTK S D+++L+ GR+ GG++TS+L + F
Sbjct: 90  VLFAPFSGWLSQALGRRHMCIFFCLSYATCCLTKLSRDYFVLIVGRILGGLSTSLLTTTF 149

Query: 124 ESWYVNEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVA 182
           ESWYV+ H+  + FP EW+  TF + AT+  GL A+ +G  A+  A+ L+LGP+APF +A
Sbjct: 150 ESWYVHHHVEIHDFPKEWIPTTFTKAATWNHGL-AVGAGLVANLLAEWLHLGPVAPFLLA 208

Query: 183 IPFLLGSTLFIYFCW---EEHYDPKTAKSSL-----------------LPNSMFSSLKFL 222
           +PFL     F+   W   E    P+  K +L                    S    L+ +
Sbjct: 209 VPFLACCAWFVLTDWAKEEAEKSPEGIKQTLPLGTLNGGVTHLSARARFSRSCSDGLRCM 268

Query: 223 FTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILI 282
            ++  ++ LG VQ+++E ++Y FIF+WTPVL+    PLG+VFSCFM + M+GS ++ +  
Sbjct: 269 LSDKRVMLLGGVQALFESVLYIFIFLWTPVLDPHGSPLGIVFSCFMAASMVGSLLFRVAT 328

Query: 283 LK--YFKPETMLTLTVYLATFS---ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG 337
               + +P  +L + V +A FS   +T STV              +  F+AFL+ E++ G
Sbjct: 329 STRYHLQPGHVLCVAVLMAFFSFFMLTFSTVPGQP--------RPHESFLAFLLLELACG 380

Query: 338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE---DAEGGKLIAIHSV 394
           +Y P   +L+GRIIPE+ RA++  W R+P + + C  L+ +  E      G        +
Sbjct: 381 LYFPALNFLQGRIIPEEKRASVLAWFRLPLHLLACLGLLALHGEVSGTGAGETGSGTRHM 440

Query: 395 FVVCTACLLVALLA 408
           F  C   +L AL+A
Sbjct: 441 FGGCAVMMLAALMA 454

Takifugu rubripes (taxid: 31033)

>sp|Q6DG19|MFSD5_DANRE Major facilitator superfamily domain-containing protein 5 OS=Danio rerio GN=mfsd5 PE=2 SV=1

 Score =  242 bits (618), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/429 (34%), Positives = 239/429 (55%), Gaps = 38/429 (8%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
            N  F+R Q  +   + LA ++DW+QGPY+YK+Y+ Y + E  IA+LY+ G AS ++F  
Sbjct: 37  ANPAFQRFQKLFLKAYLLALWADWLQGPYLYKLYRHYNFLESQIAILYVCGLASCVLFAP 96

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           V G +    GR+  C+ + + Y++CC+TK S D+++L+ GR+ GG++TS+L + FE+WYV
Sbjct: 97  VAGWLPQFLGRRQTCLLFCLAYSVCCITKLSQDYFMLILGRVLGGLSTSLLTTTFEAWYV 156

Query: 129 NEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187
           + H++ + FP EW+ +TF + A +  GL A+ +G  A+ FA+ L LGP+APF +AIP L 
Sbjct: 157 HGHVDIHDFPKEWIPVTFGKVANWNYGL-AVGAGLVANLFAEWLGLGPVAPFLLAIPSLA 215

Query: 188 GSTLFIYFCW---EEHYDPKTAKSSLLPNSM-----------------FSSLKFLFTNPC 227
               F+   W   ++       K++ L NS+                    L+ L ++  
Sbjct: 216 ACAWFVLSEWGQEDKQEGMNGDKNAPLLNSLNTPKLQLSARARFWRSCVDGLRCLLSDRR 275

Query: 228 LLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFK 287
           ++ LG VQ+++E ++Y F+F+WTPVL+   PPLG+VFS  M + M GS ++ +     ++
Sbjct: 276 VMLLGGVQALFESVLYIFVFLWTPVLDPHGPPLGIVFSSLMAATMAGSTLFRLATSAPYR 335

Query: 288 --PETMLTLTVYLATFS---ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV 342
             P  +L L + LA FS   +T STV                  +AFL+ E++ G+Y P 
Sbjct: 336 LQPGHLLCLAILLAFFSFFMLTFSTVPGQP--------RPRESLLAFLLLELACGLYFPA 387

Query: 343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE---DAEGGKLIAIHSVFVVCT 399
             +L+GR++P + RA +  W R+P + + C  L+ +  E      G        +F  C 
Sbjct: 388 VSFLQGRVVPVERRAAVLAWFRLPLHLLACLGLLALHGEVSGSGAGEAGSGTRHMFAGCA 447

Query: 400 ACLLVALLA 408
             +L ALLA
Sbjct: 448 GMMLAALLA 456

Danio rerio (taxid: 7955)

>sp|Q08B29|MFSD5_XENLA Major facilitator superfamily domain-containing protein 5 OS=Xenopus laevis GN=mfsd5 PE=2 SV=1

 Score =  238 bits (607), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/430 (33%), Positives = 248/430 (57%), Gaps = 20/430 (4%)

Query: 10  NMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIV 69
           N  F++ Q  ++  +F A  +DW+QGPY+YK+Y+ Y + E  IA++Y+ GF +S+  G+V
Sbjct: 37  NPAFRQFQYDFYRTYFPALAADWLQGPYLYKLYQHYHFLEGQIAIIYVCGFGASVFAGLV 96

Query: 70  VGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVN 129
              +  + GR+  CI + ++ +   L K S ++++L+ GR+ GG ++S+LFS FE+WY +
Sbjct: 97  SVPLTSRLGRRKSCILFCLLLSASYLCKLSQEYFVLMTGRVLGGFSSSLLFSCFEAWYTH 156

Query: 130 EHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189
           EH   + FP EWL  TF RA   +G  AI +G TA+  A+ L LGP +P  +A+P L+ S
Sbjct: 157 EHAEQHDFPAEWLPHTFTRAAAWNGGIAIAAGITANVCAEWLGLGPASPSVLAVPLLVLS 216

Query: 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW 249
            + +   W+E+Y   ++   +  + +   L+        L LG +Q+++E ++Y FIF+W
Sbjct: 217 VVLVIREWDENYGQTSSFRRVCGDGLRCLLRDRRV----LLLGTIQALFESVVYIFIFLW 272

Query: 250 TPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVST 307
           TPVL+  + PLG+ FS FM +  +GS +Y +   K  + +P  +L L++ +  FS+    
Sbjct: 273 TPVLDPHNAPLGIAFSSFMAASAVGSSLYHLATSKKYHLQPMHVLCLSILMVFFSL---F 329

Query: 308 VLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367
           +LT S    +   + +L  +AFL+ E++ G+Y P   +LR R+IPEK +  + NW RVP 
Sbjct: 330 MLTFSTAPGQEHPTESL--LAFLLIELACGLYFPAMRFLRRRLIPEKEQTGVLNWFRVPL 387

Query: 368 NFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEK 427
           N +    L+ + + D + G      ++F +C   +L+ALL  CV     + R    +SE 
Sbjct: 388 NLLAGLGLLVLHDSDYQSG----TRNMFSLCAVTMLLALL--CVVSLFTMVRN---DSEL 438

Query: 428 DLQMSQKDES 437
            L  S+ + +
Sbjct: 439 RLPASEPEPN 448

Xenopus laevis (taxid: 8355)

>sp|Q28E13|MFSD5_XENTR Major facilitator superfamily domain-containing protein 5 OS=Xenopus tropicalis GN=mfsd5 PE=2 SV=1

 Score =  231 bits (588), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/430 (33%), Positives = 246/430 (57%), Gaps = 20/430 (4%)

Query: 10  NMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIV 69
           N  F++ Q  ++  +F A  +DW+QGPY+YK+Y+ Y + E  IA++Y+ GF +S+  G+V
Sbjct: 37  NPAFRQFQYDFYRTYFPALAADWLQGPYLYKLYQHYHFLEGQIAIIYVCGFGASVFAGLV 96

Query: 70  VGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVN 129
              +  + GR+  CI + ++ +   L K S ++++L+ GR+ GG ++S+LFS FE+WY +
Sbjct: 97  SAPLTSRLGRRKSCILFCLLLSASYLCKLSQEYFVLITGRVLGGFSSSLLFSSFEAWYTH 156

Query: 130 EHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189
           EH   + FP EWL  TF RA   +G  AI +G  A+  A+ L LGP +P  +A+P L+ S
Sbjct: 157 EHAEQHDFPAEWLPHTFTRAAAWNGGIAIAAGVIANACAEWLGLGPASPSVLAVPLLVLS 216

Query: 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW 249
              +   W+E+Y   ++   +  + +   L+        L LG +Q+++E ++Y FIF+W
Sbjct: 217 VALVIREWDENYGQTSSFRRVCGDGLRCLLRDRRV----LLLGTIQALFESVVYIFIFLW 272

Query: 250 TPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVST 307
           TPVL+  + PLG+ FS FM +   GS +Y +   K  + +P  +L L++ +  FS+    
Sbjct: 273 TPVLDPHNTPLGIAFSSFMAASAAGSSLYRLATSKKYHLQPMHVLCLSILMVFFSL---F 329

Query: 308 VLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367
           +LT S    +   + +L  +AFL+ E++ G+Y P  G+LR R+IPEK +  + NW RVP 
Sbjct: 330 MLTFSTAPGQEHPTESL--LAFLLIELACGLYFPAMGFLRCRLIPEKEQIGVLNWFRVPL 387

Query: 368 NFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEK 427
           N +    L+ + + D + G      ++F +C   +L+ALL  CV     + R    +SE 
Sbjct: 388 NLLAGLGLLVLHDSDYQSGT----RNMFSLCAITMLLALL--CVVSLFTMVRN---DSEL 438

Query: 428 DLQMSQKDES 437
            L  S+ + +
Sbjct: 439 RLPTSETEPN 448

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	440
328717496	473	PREDICTED: major facilitator superfamily	0.956	0.890	0.427	1e-103
321465946	454	hypothetical protein DAPPUDRAFT_321809 [	0.940	0.911	0.431	2e-96
260807583	475	hypothetical protein BRAFLDRAFT_118340 [	0.886	0.821	0.437	4e-93
291238424	449	PREDICTED: major facilitator superfamily	0.931	0.913	0.421	2e-89
405953146	453	Major facilitator superfamily domain-con	0.938	0.911	0.398	2e-88
405963450	453	Major facilitator superfamily domain-con	0.938	0.911	0.395	6e-88
390341804	453	PREDICTED: major facilitator superfamily	0.897	0.871	0.385	2e-86
327263808	452	PREDICTED: major facilitator superfamily	0.879	0.856	0.410	3e-86
443694957	453	hypothetical protein CAPTEDRAFT_167222 [	0.938	0.911	0.384	5e-82
156402909	445	predicted protein [Nematostella vectensi	0.872	0.862	0.378	9e-82

>gi|328717496|ref|XP_001943101.2| PREDICTED: major facilitator superfamily domain-containing protein 5-like isoform 1 [Acyrthosiphon pisum] gi|328717498|ref|XP_003246224.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like isoform 2 [Acyrthosiphon pisum]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/449 (42%), Positives = 290/449 (64%), Gaps = 28/449 (6%)

Query: 7   EKTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIF 66
           ++TN +F++LQ RY I + LA F+DW+QGPYVYK+YK YGY+E  IA+L+I G  S+ +F
Sbjct: 33  QETNTDFQKLQKRYLIVYCLACFADWLQGPYVYKLYKQYGYNEGEIAVLFITGTISNSLF 92

Query: 67  GIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESW 126
           G + G++AD +GRK++CISYGI+Y+ CC+TK   +F +LL GR+ GGI+TSIL+S F+SW
Sbjct: 93  GTITGALADIYGRKMLCISYGILYSGCCMTKMFGNFQLLLVGRMLGGISTSILYSAFDSW 152

Query: 127 YVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL 186
           Y+NEH+NYY  P EWLN TFA+ATF +   AI++G  ++F   +L  GP+APF +AIPFL
Sbjct: 153 YINEHINYYKLPEEWLNNTFAKATFFNATLAILAGLLSYFLVSVLEYGPVAPFIMAIPFL 212

Query: 187 LGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI 246
           + S++++     EHY   T  +S    S+  ++    TN  + TL +VQS+YEG+MY FI
Sbjct: 213 ITSSIYVISVINEHYIHNTKSAS---ASVKKAVILWITNKNIFTLSVVQSLYEGVMYLFI 269

Query: 247 FVWTPVLEVL---SPPLGLVFSCFMISIMIGSKIYSILI-LKYFKPETMLTLTVYLATFS 302
           ++WTP  +VL    PPLGLVFS FM+++MIGSKIYSIL+       +  L L  + A+FS
Sbjct: 270 YIWTPTFDVLKDSKPPLGLVFSSFMLALMIGSKIYSILLGNSSLDSKKQLQLATFTASFS 329

Query: 303 ITVSTVLTSSLF----DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARAT 358
             +  +  S++F      ++      C+  FL++EIS+GMY P   YL+ ++IPEK R T
Sbjct: 330 FLICALTISNIFFDYNGQQKYYKVMTCYFCFLLFEISIGMYLPSMTYLKSQVIPEKIRVT 389

Query: 359 ITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIH-----------SVFVVCTACLLVALL 407
           I+N +++P+N   C  L++I  ++     +I I            ++FVVC     +A L
Sbjct: 390 ISNVIKIPSNLFICLALLWIYFKEPNEKNIIKIEENQEPDVDFILTIFVVC----FIATL 445

Query: 408 ASCVFKRLYLSRKYSCESEKDLQMSQKDE 436
            + +F +++   K+  E+ KD+    + E
Sbjct: 446 ITFIFSKIF--SKFHTETYKDIIKRHEIE 472

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321465946|gb|EFX76944.1| hypothetical protein DAPPUDRAFT_321809 [Daphnia pulex]

 Score =  358 bits (920), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 188/436 (43%), Positives = 270/436 (61%), Gaps = 22/436 (5%)

Query: 10  NMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIV 69
           N EF++ Q  +F P+ LA FSDW+QGPYVY++Y  YGY  K IALLYI GFA+S   G  
Sbjct: 35  NPEFQKFQRIFFAPYLLALFSDWLQGPYVYRLYSQYGYAPKEIALLYIVGFAASSTVGTF 94

Query: 70  VGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVN 129
            G +AD FGR+ +C+++  +YT CCLTK S +F+ L  GRLFGG+ATSILFS FE+WYV 
Sbjct: 95  TGPLADMFGRRRLCLAFCFIYTFCCLTKMSPNFWWLFAGRLFGGVATSILFSTFEAWYVC 154

Query: 130 EHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS 189
           EH    +FP +W++ TF+ +TF +G+ AI+SG  A   AD LN GP+APF  AIPFL+ S
Sbjct: 155 EHTERNVFPADWISSTFSISTFWNGILAILSGVVADIGADWLNFGPVAPFMTAIPFLIAS 214

Query: 190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW 249
            + I   W E++  +      L  S    L+ +F +  +L LG+VQS++E IMY F+F+W
Sbjct: 215 AVLISLSWPENHGSRQFG---LGRSFVEGLRTIFNDYTILLLGLVQSMFESIMYIFVFLW 271

Query: 250 TPVLEVLSP----PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITV 305
           TP+L+        PLGLVFSCFM+ IMIGS + ++L+ +  +P T+L ++V  +  S+ +
Sbjct: 272 TPILDSSQSANAWPLGLVFSCFMVCIMIGSSLNTLLLNRNIRPSTILLISVTCSAVSM-I 330

Query: 306 STVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRV 365
           +   ++++     +LS    F+AFL+ E+SVGMY P  GYLR ++IPE  RA+I N  RV
Sbjct: 331 TCAWSTNIQHRLPILS----FLAFLLLEVSVGMYFPAIGYLRSQVIPESQRASINNVFRV 386

Query: 366 PTNFITCFTLIFIKNEDAEGGKLIA--IHSVFVVCTACLLVALLASCVFKRLYLSRKYSC 423
           P N ITC  L  +   D  GG   +    + F+   A  LV  +++  F + +       
Sbjct: 387 PLNLITCTVLYCLHRNDDAGGNHASGGDQNAFLFNVALSLVGFISALAFSKRF------- 439

Query: 424 ESEKDLQMSQKDESFI 439
             EK   + +K+E  I
Sbjct: 440 -EEKTKTIDEKNEPLI 454

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260807583|ref|XP_002598588.1| hypothetical protein BRAFLDRAFT_118340 [Branchiostoma floridae] gi|229283861|gb|EEN54600.1| hypothetical protein BRAFLDRAFT_118340 [Branchiostoma floridae]

 Score =  348 bits (892), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 178/407 (43%), Positives = 266/407 (65%), Gaps = 17/407 (4%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F++ Q  YF  +FLA  +DW+QGPY+YK+Y  YG++E  IA+LY+ GFASS+IFG 
Sbjct: 46  SNPIFRKFQTDYFKVYFLALLADWLQGPYLYKLYSHYGFEESQIAVLYVCGFASSVIFGT 105

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
             G +AD++GRK +C+ + +VY++ CLTK S  + +L+ GR+ GGI+TS+LF+ FESWYV
Sbjct: 106 GTGVLADRYGRKKLCVCFAVVYSISCLTKLSRHYGVLILGRVLGGISTSLLFTAFESWYV 165

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
            EH+  + FP EWL +TF+RATF +G+ AI +G  A+ FA + N GP+APF +AIP L+ 
Sbjct: 166 YEHIETHDFPPEWLPVTFSRATFWNGILAIGAGIAANIFAGLFNFGPVAPFIMAIPLLIA 225

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           S + +   W E+Y  +  + S L       L+ +  +  +L +G +QS++E  MY F+F+
Sbjct: 226 SGVLVSTKWNENYGTRQMRFSKL---CIEGLREIVRSKRILLIGAIQSLFESCMYIFVFI 282

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPET--MLTLTVYLATFSITVS 306
           WTPVL+   PPLG++FS FMI IMIGS ++ IL  K+ + +   +L ++V LA  S+   
Sbjct: 283 WTPVLDPSGPPLGVIFSSFMICIMIGSSLFHILTTKHARLQAVHVLAISVLLALTSMVAC 342

Query: 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
              T    ++  V      F+AFL+ E++ GMY P  GYLR RIIPEK RA++ NW RVP
Sbjct: 343 IKSTHPHHENPTV-----SFLAFLLLELACGMYFPCMGYLRSRIIPEKNRASVINWFRVP 397

Query: 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK 413
            N I C  L+++ N+D  G      H +F++C+  L++A+L  CV +
Sbjct: 398 LNSIACIGLMYLHNDDVLG-----THKIFIICSLLLMIAML--CVLQ 437

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291238424|ref|XP_002739131.1| PREDICTED: major facilitator superfamily domain containing 5-like [Saccoglossus kowalevskii]

 Score =  335 bits (860), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/432 (42%), Positives = 272/432 (62%), Gaps = 22/432 (5%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F + Q  YF+ +FLA  +DW+QGPY+YK+Y  YG+ E  IA+LY+ GFASS++FG 
Sbjct: 34  SNPTFTQFQRGYFLVYFLALAADWLQGPYLYKLYSYYGFIESQIAVLYVCGFASSVVFGT 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
             G +ADK GRK +C+++ +VY++ CLTK S D+ IL+ GR+  GI+TS+LF+ FE+WYV
Sbjct: 94  YAGILADKLGRKKLCMTFAVVYSVSCLTKLSRDYAILIVGRVLSGISTSLLFTAFEAWYV 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EWL  TF++ATF +G+ AI++G  A+  A  L+LGP++PF  AIPFL+ 
Sbjct: 154 HEHVETHDFPAEWLPATFSKATFWNGILAIIAGIIANILAGGLDLGPVSPFIFAIPFLMA 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           S   +YF W E+Y  K AK   L    F  L+ +  +  +L +GI+QS+YE +MY F+F+
Sbjct: 214 SGTIVYFTWTENYGTKQAK---LCKGCFDGLRDIVQSRRVLLIGIIQSLYESVMYIFVFL 270

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTV 308
           WTP+L+   PPLG++FS FMI IM+GS ++ IL  K +   T+L +++ L   S+ +   
Sbjct: 271 WTPILDSEGPPLGVIFSSFMICIMLGSSVFKILNAKRYPMFTILNISLALGLISMII--C 328

Query: 309 LTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTN 368
           + SS     +  S +  ++AFLI E   GMY P  G+LR  I+PE  RA I NW RVP N
Sbjct: 329 VGSS---HPKYFSPSCSYIAFLILEFGCGMYFPAMGFLRSLILPEAHRAGIMNWFRVPLN 385

Query: 369 FITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEKD 428
            I C  L+ +  + +  G+     ++F++C   + VA++    F  L        + + D
Sbjct: 386 LIACILLMVLHGDPSRLGE----KNIFLICAILMSVAMMCGINFAVL-------VKDDDD 434

Query: 429 LQMS---QKDES 437
           L+ S    KDES
Sbjct: 435 LKTSTENDKDES 446

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|405953146|gb|EKC20862.1| Major facilitator superfamily domain-containing protein 5 [Crassostrea gigas]

 Score =  332 bits (851), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/427 (39%), Positives = 259/427 (60%), Gaps = 14/427 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
            N  F R Q  YF  + +A F+DW+QGPY+YK+Y  YG+ E+ IA+LY+ GFAS+++ G 
Sbjct: 35  NNPMFVRFQRGYFAAYLMAMFADWLQGPYLYKLYHHYGFQEEQIAILYVFGFASTVLLGT 94

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
                AD+FGRK +C+S+ ++Y++ C+ K S+ + +LL GR+ GGIATS+LFS FE+WYV
Sbjct: 95  WTPIAADQFGRKKLCMSFTVLYSVSCILKLSTSYGVLLIGRILGGIATSVLFSAFEAWYV 154

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EW+ +TFA+A+F +GL AI++GFT +   D +  GP+AP+ +AIPFL+ 
Sbjct: 155 HEHVETHDFPKEWIAVTFAKASFWNGLMAILAGFTTNVLCDWMGFGPVAPYILAIPFLVA 214

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           + + + + W E+Y   T K   L    F S   + T   +  LG ++S++E ++Y  IF+
Sbjct: 215 AGVIVMYTWNENYSGHTIKFRKLCGEGFKS---IVTEEKIFMLGAIESLFESVIYIIIFL 271

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILIL-KYFKPETMLTLTVYLATFSITVST 307
           WTP+LE   P LG+VFS FMISI+ G   + +L L K      +L +++ +A F+   + 
Sbjct: 272 WTPILEPAKPMLGVVFSTFMISILTGQAFFQVLNLRKKLSTTVLLIISIAIALFA---NL 328

Query: 308 VLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367
           +L  S           L F AF+++EI+VG+Y P  G+LR RIIP+  R +I NW RVP 
Sbjct: 329 LLVYSTHPGAH--DYALSFSAFVVFEIAVGIYFPAMGFLRSRIIPDTHRWSIMNWFRVPI 386

Query: 368 NFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEK 427
           N I C  L+ +  +    G       +FV+C   L +A+L+   FK L  +   S + E 
Sbjct: 387 NLIACAVLLLLHEDVFRHGN----QMIFVICVVLLFLAILSGVRFKTL-TNDDESLKQEA 441

Query: 428 DLQMSQK 434
             Q S  
Sbjct: 442 GWQESDH 448

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|405963450|gb|EKC29020.1| Major facilitator superfamily domain-containing protein 5 [Crassostrea gigas]

 Score =  331 bits (848), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 169/427 (39%), Positives = 259/427 (60%), Gaps = 14/427 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
            N  F R Q  YF  + +A F+DW+QGPY+YK+Y  YG+ E+ IA+LY+ GFAS+++ G 
Sbjct: 35  NNPMFVRFQRGYFAAYLMAMFADWLQGPYLYKLYHHYGFQEEQIAILYVFGFASTVLLGT 94

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
                AD+FGRK +C+S+ ++Y++ C+ K S+ + +LL GR+ GGIATS+LFS FE+WYV
Sbjct: 95  WTPIAADQFGRKKLCMSFTVLYSVSCILKLSTSYGVLLIGRILGGIATSVLFSAFEAWYV 154

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EW+ +TFA+A+F +GL AI++GFT +   D +  GP+AP+ +AIPFL+ 
Sbjct: 155 HEHVETHDFPKEWIAVTFAKASFWNGLMAILAGFTTNVLCDWMGFGPVAPYILAIPFLVA 214

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           + + + + W E+Y   T K   L    F S   + T   +  LG ++S++E ++Y  IF+
Sbjct: 215 AGVIVMYTWNENYSGHTIKFRKLCGEGFKS---IVTEEKIFMLGAIESLFESVIYIIIFL 271

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILIL-KYFKPETMLTLTVYLATFSITVST 307
           WTP+LE   P LG+VFS FM+SI+ G   + +L L K      +L +++ +A F+   + 
Sbjct: 272 WTPILEPAKPMLGVVFSTFMMSILTGQAFFQVLNLRKKLSTTVLLIISIAIALFA---NL 328

Query: 308 VLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367
           +L  S           L F AF+++EI+VG+Y P  G+LR RIIP+  R +I NW RVP 
Sbjct: 329 LLVYSTHPGAH--DYALSFSAFVVFEIAVGIYFPAMGFLRSRIIPDTHRWSIMNWFRVPI 386

Query: 368 NFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEK 427
           N I C  L+ +  +    G       +FV+C   L +A+L+   FK L  +   S + E 
Sbjct: 387 NLIACAVLLLLHEDVFRHGN----QMIFVICVVLLFLAILSGVRFKTL-TNDDESLKQEA 441

Query: 428 DLQMSQK 434
             Q S  
Sbjct: 442 GWQESDH 448

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|390341804|ref|XP_003725529.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Strongylocentrotus purpuratus]

 Score =  325 bits (834), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/407 (38%), Positives = 250/407 (61%), Gaps = 12/407 (2%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
            N  F + Q +YF+ +FLA  +DW+QGPY+YK+Y  YG+ E  I +LY+ GFA+S++FG 
Sbjct: 41  NNPTFVKFQRKYFLAYFLALAADWLQGPYLYKLYSYYGFLESQITVLYVCGFAASVVFGS 100

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           +  S+AD+FGRK +CI++ IVY++ C  K S  + +L+ GR+ GG++TS+LF+ FE+WY 
Sbjct: 101 LTSSLADRFGRKKLCITFCIVYSVSCFMKLSRSYGLLIIGRILGGVSTSLLFTAFEAWYA 160

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EHL  + FP EWL++TF++AT  +G  A+ +G  A+  A    LGP++PF ++IP L+ 
Sbjct: 161 HEHLETHDFPKEWLSVTFSKATVWNGALAVGAGIVANIIAGPFGLGPVSPFLLSIPLLVA 220

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           S + +   W+E+Y  +    S    +    ++ + ++  ++ +G +QS+YE +MY FIF+
Sbjct: 221 SGVIVATSWKENYSQQRVSCS---KTCGEGMRHILSSRRMMLIGAMQSLYESVMYIFIFI 277

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTV 308
           WTPVL+    PLGL+FS FM+ IMIGS +Y IL      P  ++   + +A  S  +   
Sbjct: 278 WTPVLDPYELPLGLIFSNFMLCIMIGSAVYQILTTIRHSPVVLVNAAIIVALVSTLICVG 337

Query: 309 LTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTN 368
            T  L +   V      + AFL+ E++ G+Y P  G+LR +I+PE  R  I NW RVP N
Sbjct: 338 STKPLQEHPTV-----SYFAFLLLELACGIYFPAMGFLRSKILPESHRTGIMNWFRVPLN 392

Query: 369 FITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRL 415
            I C  L+ + +E  + G       +F++C+A L++AL     F  +
Sbjct: 393 LIACIMLMVLHDEPTKAGT----RHIFIICSALLVLALCCGVQFSSI 435

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|327263808|ref|XP_003216709.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Anolis carolinensis]

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 165/402 (41%), Positives = 266/402 (66%), Gaps = 15/402 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           +N  F R Q+ Y+  +FLA  +DW+QGPY+YK+Y+ Y + E  IA++Y+ GFASS++FG+
Sbjct: 34  SNPAFLRFQLDYYQVYFLALAADWLQGPYLYKLYQHYHFLEAQIAIIYVCGFASSVLFGL 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           V  S+ D+ GRK  CI + + Y++CCLTK S D+++L+ GR+ GG++T++LFS FE+WYV
Sbjct: 94  VSNSLVDRLGRKKSCILFSLTYSICCLTKLSWDYFVLVVGRILGGLSTALLFSAFEAWYV 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  Y FP EW+  TF++A+F + + A+ +G  A+ FA+ L LGP+APF V+IPFL+ 
Sbjct: 154 HEHVERYDFPAEWIPATFSKASFWNSVIAVGAGVVANVFAEWLGLGPVAPFMVSIPFLML 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
             +     W+E+Y  K A    L  +    LK L ++  +L LG +Q+++E ++Y FIF+
Sbjct: 214 VGVLAIKNWDENYGKKRA----LSRTCTDGLKCLLSDRRVLLLGTIQALFESVIYIFIFL 269

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVS 306
           WTPVL+  +PPLG+VFS FM + M+GS +Y I   K  + +P  +L+L+V +  FS+ + 
Sbjct: 270 WTPVLDPYNPPLGIVFSSFMAASMVGSSLYRIATSKKYHLQPMHILSLSVLMVFFSLFML 329

Query: 307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
           T  T+   +     + +  F+AFL+ E+S G+Y P  G+LR ++IPEK +A + +W RVP
Sbjct: 330 TFSTNPGQE-----NPSESFLAFLLIELSCGLYFPSMGFLRQKVIPEKDQAGVMHWFRVP 384

Query: 367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA 408
            N + C  L+ + + D + G      ++F +C+  +++ALLA
Sbjct: 385 LNLLACLGLLILHDSDYKTGT----RNMFTICSVMMVMALLA 422

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443694957|gb|ELT95975.1| hypothetical protein CAPTEDRAFT_167222 [Capitella teleta]

 Score =  311 bits (796), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 164/427 (38%), Positives = 262/427 (61%), Gaps = 14/427 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
            N  F + Q  YF+ +F A  +DW+QGPY+YK+Y  YG++E+ IA+LY+ GFAS++I G 
Sbjct: 34  NNPLFLKFQRSYFLAYFPALLADWLQGPYLYKLYSHYGFEEQQIAVLYVCGFASTVILGT 93

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
                AD+FGRK +C+ + +VY+L C  K S  + +LL GRL GG+ATS+LFS FE+WYV
Sbjct: 94  WAPLAADRFGRKKLCMFFTVVYSLACFFKLSLGYGLLLLGRLLGGVATSLLFSAFEAWYV 153

Query: 129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
           +EH+  + FP EW+ +TF +A+  +G+ AI+ GF A+  A+ ++ GP+APF +A+P LL 
Sbjct: 154 HEHIETHDFPREWIGVTFNKASVSNGVLAIIGGFIANIVAEWMDFGPVAPFMLAVPCLLI 213

Query: 189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
           S + +   W E+Y   +A+ +    +    L+ +FT+P +  +GI+ +++E +MY F+F+
Sbjct: 214 SGILVSSQWNENY---SAQKAPFKKTCMDGLQTIFTDPKIFLIGIITALFESVMYIFVFI 270

Query: 249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTV 308
           WTPVL+   P LG++FS +M+ IMIGS I+ +++ +      +LT  +  A F   V  +
Sbjct: 271 WTPVLDPGHPSLGIIFSSYMVCIMIGSAIFQLMVTRKVPVRNLLTFAIVTA-FIANVMCI 329

Query: 309 LTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTN 368
             +      R    NL FV+FLI EISVG+Y P   YLR +++PE  R ++ NW RVP N
Sbjct: 330 FATHHSSPNR----NLAFVSFLIIEISVGIYFPSMSYLRAKLVPEATRRSVMNWFRVPMN 385

Query: 369 FITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKRLYLSRKYSCESEKD 428
            I C  L+ + ++    G  +    +FV C+  L  AL    +F  L +  + + ++   
Sbjct: 386 LIACVVLMLLHHDSFRHGNRL----IFVTCSGLLAFALAGIVMF--LAIVSRENTQTVDK 439

Query: 429 LQMSQKD 435
           L +S+ +
Sbjct: 440 LIVSEAE 446

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|156402909|ref|XP_001639832.1| predicted protein [Nematostella vectensis] gi|156226963|gb|EDO47769.1| predicted protein [Nematostella vectensis]

 Score =  310 bits (794), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 252/404 (62%), Gaps = 20/404 (4%)

Query: 5   RGEKT---NMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFA 61
           R E+T   N +F   Q  YF  +FLA  ++W+QGPY+YK+Y  YG+ +  IA++Y+ GFA
Sbjct: 24  RKEETTLANPKFITFQATYFRVYFLALMAEWLQGPYLYKLYSHYGFIDTQIAIIYVCGFA 83

Query: 62  SSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFS 121
           SS+IFG   G +A+ FGRK  C+ + I+Y++CCLTK S ++ IL++GR+ GGI+TS+LF+
Sbjct: 84  SSVIFGTSSGYLANAFGRKKACVLFTILYSVCCLTKLSRNYGILIFGRVLGGISTSLLFT 143

Query: 122 GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV 181
            F++WYV EH     FPVEW++ TF++AT  + L ++V+GF A+  A+ LN GP+AP+ +
Sbjct: 144 AFDAWYVYEHTQSNDFPVEWVSETFSKATLFNSLISVVAGFLANCAAEWLNFGPVAPYVM 203

Query: 182 AIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGI 241
           AIPFL+ + + I F WEE+Y  +++K   L       L+ +  N  ++ +GI+ S++E  
Sbjct: 204 AIPFLVLAGVLIIFTWEENYGGRSSK---LVGPCMDCLRHIIQNRRIMLIGIINSLFESA 260

Query: 242 MYTFIFVWTPVLEVLS--PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLA 299
           MY F+F+WTPVL+     PPLG+VF+CFM+ +++G   ++  + +   P   +  T+ +A
Sbjct: 261 MYIFVFLWTPVLDRHQQYPPLGIVFACFMLCVLLGGIFFNFTLTQRISPLKTVVATITMA 320

Query: 300 TFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATI 359
           + +   + V +++             F+ F++ E++ G+Y P  G+LR RI+PE     I
Sbjct: 321 SLANIGAAVASAN--------HPKTSFMMFIVLELTCGVYFPAMGWLRQRILPEAHHTGI 372

Query: 360 TNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL 403
            NW R+P N I    L+ + +  +  G    I ++F +C+  L+
Sbjct: 373 INWFRIPLNTIAAIVLMALHDTHSSHG----ISAIFAMCSVLLV 412

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	440
UNIPROTKB|Q0VC03	450	MFSD5 "Major facilitator super	0.836	0.817	0.370	1.3e-70
UNIPROTKB|Q6N075	450	MFSD5 "Major facilitator super	0.838	0.82	0.365	2.6e-70
MGI|MGI:2145901	450	Mfsd5 "major facilitator super	0.838	0.82	0.357	8.9e-70
TAIR|locus:2137707	460	AT4G27720 [Arabidopsis thalian	0.840	0.804	0.364	1.2e-60
TAIR|locus:2082971	460	AT3G49310 [Arabidopsis thalian	0.838	0.802	0.361	1.5e-60
ZFIN|ZDB-GENE-040718-468	481	mfsd5 "major facilitator super	0.465	0.426	0.361	2.9e-60
TAIR|locus:2019429	462	AT1G64650 [Arabidopsis thalian	0.840	0.800	0.364	4.5e-59
WB|WBGene00021870	432	Y54G2A.4 [Caenorhabditis elega	0.790	0.805	0.366	4.2e-56
TAIR|locus:1005716655	449	AT2G23093 "AT2G23093" [Arabido	0.788	0.772	0.229	2e-11
TIGR_CMR|BA_3518	399	BA_3518 "drug resistance trans	0.493	0.543	0.241	0.00011

UNIPROTKB|Q0VC03 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Bos taurus (taxid:9913)]

 Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
 Identities = 141/381 (37%), Positives = 224/381 (58%)

Query:     9 TNMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFASSMIFGI 68
             +N  F R Q+ ++  +FLA  +DW+Q              E  IA+LY+ G AS+++FG+
Sbjct:    34 SNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEAQIAILYVCGLASTVLFGL 93

Query:    69 VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
             V  S+ D  GRK  C+ + + Y+LCCLTK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct:    94 VASSLVDWLGRKKSCVLFSLTYSLCCLTKLSRDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query:   129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL-L 187
             +EHL  + FP EW+  TFARA F + + A+ +G  A   A  + LGP+APF  AIP L L
Sbjct:   154 HEHLERHDFPTEWIPATFARAAFWNHVLAVAAGVAAEAVACWMGLGPVAPFVAAIPLLAL 213

Query:   188 GSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF 247
                L ++  W E+YD + A S     +    L+ L ++  +L LG +Q+++E +++ F+F
Sbjct:   214 AGALALHN-WGENYDRQRAFS----RTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVF 268

Query:   248 VWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLAXXXXXX 305
             +WTPVL+    PLG++FS FM + ++GS +Y I   K  + +P  +L+L V +       
Sbjct:   269 LWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFM 328

Query:   306 XXXXXXXXXDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRV 365
                      +S  V S    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RV
Sbjct:   329 LTFSTSPGQESP-VES----FIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRV 383

Query:   366 PTNFITCFTLIFIKNEDAEGG 386
             P + + C  L+ + + D + G
Sbjct:   384 PLHLLACLGLLVLHDSDRKTG 404

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q6N075 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Homo sapiens (taxid:9606)]

 Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
 Identities = 139/380 (36%), Positives = 222/380 (58%)

Query:     9 TNMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFASSMIFGI 68
             +N  F R Q+ ++  +FLA  +DW+Q              E  IA+LY+ G AS+++FG+
Sbjct:    34 SNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGL 93

Query:    69 VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
             V  S+ D  GRK  C+ + + Y+LCCLTK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct:    94 VASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query:   129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
             +EH+  + FP EW+  TFARA F + + A+V+G  A   A  + LGP+APF  AIP L  
Sbjct:   154 HEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLAL 213

Query:   189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
             +       W E+YD + A S     +    L+ L ++  +L LG +Q+++E +++ F+F+
Sbjct:   214 AGALALRNWGENYDRQRAFS----RTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFL 269

Query:   249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLAXXXXXXX 306
             WTPVL+    PLG++FS FM + ++GS +Y I   K  + +P  +L+L V +        
Sbjct:   270 WTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFML 329

Query:   307 XXXXXXXXDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
                     +S  V S    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RVP
Sbjct:   330 TFSTSPGQESP-VES----FIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVP 384

Query:   367 TNFITCFTLIFIKNEDAEGG 386
              + + C  L+ + + D + G
Sbjct:   385 LHSLACLGLLVLHDSDRKTG 404

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2145901 Mfsd5 "major facilitator superfamily domain containing 5" [Mus musculus (taxid:10090)]

 Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
 Identities = 136/380 (35%), Positives = 222/380 (58%)

Query:     9 TNMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFASSMIFGI 68
             +N  F + Q+ ++  +FLA  +DW+Q              E  IA+LY+ G AS+++FG+
Sbjct:    34 SNPSFLQFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGL 93

Query:    69 VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
             V  S+ D  GRK  C+ + + Y+LCC+TK S D+++LL GR  GG++T++LFS FE+WY+
Sbjct:    94 VASSLVDWLGRKKSCVLFSLTYSLCCITKLSQDYFVLLVGRALGGLSTALLFSAFEAWYI 153

Query:   129 NEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
             +EH+  + FP EW+  TFARA F + + A+ +G  A   A  + LGP+APF  AIP L  
Sbjct:   154 HEHVERHDFPAEWIPATFARAAFWNHVLAVAAGVAAEAVASWIGLGPVAPFVAAIPLLAL 213

Query:   189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV 248
             +       W E+YD + A S     +    L+ L ++  +L LG++Q+++E +++ F+F+
Sbjct:   214 TGALALRNWGENYDRQRAFSK----TCAGGLRCLLSDRRVLLLGVIQALFESVIFIFVFL 269

Query:   249 WTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILK--YFKPETMLTLTVYLAXXXXXXX 306
             WTPVL+    PLG+VFS FM + ++GS +Y I   K  + +P  +L+L V +        
Sbjct:   270 WTPVLDPHGAPLGIVFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFML 329

Query:   307 XXXXXXXXDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP 366
                     ++  V S    F+AFL+ E++ G+Y P   +LR ++IPE  +A + NW RVP
Sbjct:   330 TFSTSPGQENP-VES----FIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVP 384

Query:   367 TNFITCFTLIFIKNEDAEGG 386
              + + C  L+ + + D + G
Sbjct:   385 LHLLACLGLLVLHDSDRKTG 404

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2137707 AT4G27720 [Arabidopsis thaliana (taxid:3702)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 140/384 (36%), Positives = 210/384 (54%)

Query:     2 NSERGEKTNMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFA 61
             N +R   T+  F   +  Y + + L    DW+Q              + +I  L+IAGF 
Sbjct:    25 NKDR-INTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFG 83

Query:    62 SSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFS 121
             SSM+FG +VGS+ADK GRK  C++Y I Y L C+TK S  + +L+ GR+ GGIATS+LFS
Sbjct:    84 SSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFS 143

Query:   122 GFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPIAPFA 180
              FESW V EH N   F  +WL++TF++A F G+GL AI++G   +   D  +LGP+APF 
Sbjct:   144 SFESWLVAEH-NKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFD 202

Query:   181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEG 240
              A  FL      I   W E+Y   +    LL     +++  + ++  +  LG +QS++EG
Sbjct:   203 AAACFLTIGMAVILSSWTENYGDPSENKDLLTQFRGAAVA-IASDEKIALLGAIQSLFEG 261

Query:   241 IMYTFIFVWTPVLEVLSP--PLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLTVY 297
              MYTF+F+WTP L       P G +F+ FM++ M+GS + S L+ +   K E+ + + V+
Sbjct:   262 SMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSTPKVESYMQI-VF 320

Query:   298 LAXXXXXXXXXXXXXXXDSRRV----LSTNLCF--VAFLIYEISVGMYCPVTGYLRGRII 351
             L                   +V    +S + CF  + F I+E  VG++ P    +R + I
Sbjct:   321 LVSGAALLLPILMTLFIAPSKVKGGGISFSGCFQLLGFCIFEACVGLFWPSIMKMRSQYI 380

Query:   352 PEKARATITNWLRVPTNFITCFTL 375
             PE+AR+TI N+ R+P N   C  L
Sbjct:   381 PEEARSTIMNFFRIPLNIFVCVVL 404

GO:0005886 "plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2082971 AT3G49310 [Arabidopsis thaliana (taxid:3702)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 139/385 (36%), Positives = 211/385 (54%)

Query:     2 NSERGEKTNMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFA 61
             N +R   T+  F   +  Y + F +    DW+Q              + +I  L+IAGF 
Sbjct:    25 NKDR-INTSSSFNSFKNNYLLVFSIMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFG 83

Query:    62 SSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFS 121
             SSM+FG +VGS+ADK GRK  C++Y IVY L C+TK S  + +L+ GR+ GGIATS+LFS
Sbjct:    84 SSMLFGTIVGSLADKQGRKRACVTYCIVYILSCITKHSPQYKVLMVGRILGGIATSLLFS 143

Query:   122 GFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPIAPFA 180
              FESW + EH N   F  +WL+LTF++A F G+GL AI+SG   +   D  + GP+APF 
Sbjct:   144 AFESWLIAEH-NKRNFEQQWLSLTFSKAVFLGNGLVAILSGLFGNLLVDTFSFGPVAPFD 202

Query:   181 VAIPFLLGSTLFIYFCWEEHY-DPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYE 239
              A  FL      I   W E++ DP  +K  LL     +++  + ++  +  LG +QS++E
Sbjct:   203 AAACFLAIGMAIILGTWSENFGDPSDSKD-LLTQFKVAAIA-IASDEKIALLGAIQSLFE 260

Query:   240 GIMYTFIFVWTPVLEVLSP--PLGLVFSCFMISIMIGSKIYSILILKY-FKPETMLTLTV 296
               MYTF+F+WTP L       P G VF+ FM++ M+GS + + L+ +   + E  + + V
Sbjct:   261 ASMYTFVFLWTPALSPNDEEIPHGFVFATFMLASMLGSSLAARLMSRSSLRVENYMQI-V 319

Query:   297 YLAXXXXXXXXXXXXXXXDSRRV------LSTNLCFVAFLIYEISVGMYCPVTGYLRGRI 350
             +L                   +V      L++++  + F ++E  VG++ P    +R + 
Sbjct:   320 FLVSAASLLLPITTSVLVTPSKVKDEGLSLTSSIQLLGFCVFESCVGIFWPSIMKMRSQY 379

Query:   351 IPEKARATITNWLRVPTNFITCFTL 375
             IPE+AR+TI N+ RVP N   C  L
Sbjct:   380 IPEEARSTIMNFFRVPLNIFVCIVL 404

GO:0005794 "Golgi apparatus" evidence=IDA

ZFIN|ZDB-GENE-040718-468 mfsd5 "major facilitator superfamily domain containing 5" [Danio rerio (taxid:7955)]

 Score = 379 (138.5 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
 Identities = 76/210 (36%), Positives = 124/210 (59%)

Query:    10 NMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFASSMIFGIV 69
             N  F+R Q  +   + LA ++DW+Q              E  IA+LY+ G AS ++F  V
Sbjct:    38 NPAFQRFQKLFLKAYLLALWADWLQGPYLYKLYRHYNFLESQIAILYVCGLASCVLFAPV 97

Query:    70 VGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVN 129
              G +    GR+  C+ + + Y++CC+TK S D+++L+ GR+ GG++TS+L + FE+WYV+
Sbjct:    98 AGWLPQFLGRRQTCLLFCLAYSVCCITKLSQDYFMLILGRVLGGLSTSLLTTTFEAWYVH 157

Query:   130 EHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG 188
              H++ + FP EW+ +TF + A +  GL A+ +G  A+ FA+ L LGP+APF +AIP L  
Sbjct:   158 GHVDIHDFPKEWIPVTFGKVANWNYGL-AVGAGLVANLFAEWLGLGPVAPFLLAIPSLAA 216

Query:   189 STLFIYFCW--EEHYDPKTA-KSSLLPNSM 215
                F+   W  E+  +     K++ L NS+
Sbjct:   217 CAWFVLSEWGQEDKQEGMNGDKNAPLLNSL 246

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2019429 AT1G64650 [Arabidopsis thaliana (taxid:3702)]

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 140/384 (36%), Positives = 205/384 (53%)

Query:     2 NSERGEKTNMEFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFA 61
             N +R   T+  F   +  Y + + L    DW+Q              +  I  L+IAGF 
Sbjct:    25 NKDR-INTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG 83

Query:    62 SSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFS 121
             SSM+FG +VGS+ADK GRK   I+Y I Y L C+TK S  + +L+ GR+ GGIATS+LFS
Sbjct:    84 SSMLFGTIVGSLADKQGRKRASITYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFS 143

Query:   122 GFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPIAPFA 180
              FESW V EH N   F  +WL++TF++A F G+GL AI++G   ++  D L+LGP+APF 
Sbjct:   144 AFESWLVAEH-NKRGFEQQWLSVTFSKAIFLGNGLVAIIAGLFGNYLVDSLSLGPVAPFD 202

Query:   181 VAIPFLLGSTLFIYFCWEEHY-DPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYE 239
              A  FL      I   W E+Y DP   K  L      ++   + ++  +  LG +QS++E
Sbjct:   203 AAACFLAIGMAVIISSWSENYGDPSENKDLL--TQFKNAASAIASDEKIALLGAIQSLFE 260

Query:   240 GIMYTFIFVWTPVLEVLSP--PLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLTV 296
             G MYTF+F+WTP L       P G +F+ FM++ M+GS I S L+     K E+ + +  
Sbjct:   261 GSMYTFVFLWTPALSPNEEDIPHGFIFATFMLASMLGSSIASRLLAHSSPKVESYMQIVF 320

Query:   297 YLAXXXXXXXXXXXXXXXDSR---RVLSTNLCF--VAFLIYEISVGMYCPVTGYLRGRII 351
              ++                S      +S + C   + F  +E  VG++ P    +R + I
Sbjct:   321 VISSAALMLPVVTSFLVAPSGVKGGSISFSGCIQLMGFCTFEACVGIFWPSIMKMRSQYI 380

Query:   352 PEKARATITNWLRVPTNFITCFTL 375
             PE+AR+TI N+ R+P N   C  L
Sbjct:   381 PEEARSTIMNFFRIPLNIFVCLVL 404

GO:0009507 "chloroplast" evidence=ISM

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

WB|WBGene00021870 Y54G2A.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 135/368 (36%), Positives = 197/368 (53%)

Query:    12 EFKRLQVRYFIPFFLATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFASSMIFGIVVG 71
             +FK  Q  Y I + +A   DW+Q              +  I +L+IAGF SS++FG  +G
Sbjct:    31 KFKSFQRTYLIVYMMAVAGDWLQGPHVYALYESYGMSKHQIEILFIAGFGSSLLFGTFIG 90

Query:    72 SIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEH 131
             SIADKFGR+  C+ Y I+Y   C+TK   +  +L+ GR  GGIATSIL+S FESW + EH
Sbjct:    91 SIADKFGRRNNCLMYAILYGGACITKHFGNMPVLMIGRFLGGIATSILYSAFESWLIFEH 150

Query:   132 LNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191
              N   F    L   F+ A  G+ L AI+SG  A F A+    G +APF +A+  LL   +
Sbjct:   151 -NTRGFSDSLLGTVFSNAALGNSLIAIISGVAAQFVAE--RFGFVAPFDLALSVLLIMAV 207

Query:   192 FIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP 251
              I   W E+Y  + A    +  S   + + +  +P +  LG+VQS++EG MYTF+  WTP
Sbjct:   208 IIMNTWPENYGNEKAP---VKESFQKATQAIREDPNVFCLGLVQSLFEGSMYTFVLEWTP 264

Query:   252 VLEVLSP----PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLAXXXXXXXX 307
              L   +     P G +F+ FM++ MIGS ++ +L  ++ +PE+ +   + LA        
Sbjct:   265 ALSRAAGDVGIPHGYIFAAFMVATMIGSSVFKLL-QQHERPESFMRYVLLLAAVCLSMPI 323

Query:   308 XXXXXXXDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT 367
                    DS   L+  L F  FL++E+  G++ P  G LRG  + E+ R+T  N  RVP 
Sbjct:   324 VAP----DS---LA--LVFGGFLVFEMCCGIFWPSMGCLRGTYVSEETRSTTLNLFRVPL 374

Query:   368 NFITCFTL 375
             N I  F L
Sbjct:   375 NLIVIFIL 382

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:1005716655 AT2G23093 "AT2G23093" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 85/371 (22%), Positives = 155/371 (41%)

Query:    13 FKRLQVRYFIPFF-LATFSDWIQXXXXXXXXXXXXXXEKNIALLYIAGFASSMIFGIVVG 71
             F R Q R+F+  + L++  + +               ++++      G++++++ G V+G
Sbjct:    51 FARFQ-RWFLAIYTLSSVMEGLLSVYGELELTTYGLSKESMVFYLCVGYSTALVLGPVLG 109

Query:    72 SIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEH 131
              ++D  G+K IC+ Y +++ +  + K  +      +  +F  +A  +   GFE+W V EH
Sbjct:   110 VVSDLIGQKKICLLYCVLHLIVGVWKRITMSPSAWFANVFLSLAGLVYSFGFETWLVVEH 169

Query:   132 LNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL 191
                     + LN TF   TF      I     A++         IA  A A   LL S +
Sbjct:   170 EKQSQRN-DSLNETFWLMTFLESASLIGGQVLANWLVGENVQDGIALSATAS--LLLSVV 226

Query:   192 FIYFCWEEHYDPKTAKSSL--LPNSMFSSLKFLFT--NPCLLTLGIVQSIYEGIMYTFIF 247
              I  C  +     TAK  L  LP   +S+  + +   +  +  LG  Q+  +     F  
Sbjct:   227 TI-ICIVQ-----TAKEPLKTLPFRDYSTAFYAYVLGDKRIWFLGTSQACLQFSTAVFWI 280

Query:   248 VWTP--VLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLAXXXXXX 305
             +W P  V +     LGL++ CF+ S M+GS ++  L+      +++L L   L       
Sbjct:   281 LWAPTIVADGREVNLGLIYPCFLGSRMLGSTVFPWLM----SGQSLLRLEDCLVYIYALL 336

Query:   306 XXXXXXXXXDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRV 365
                      D + +    +  V F ++    G+  P+   LR   +P + R  + +  +V
Sbjct:   337 GIVFSIVAYDYQEI---RILVVLFCLFHGFAGLALPLLARLRTMYVPNELRGGMISLSQV 393

Query:   366 PTNFITCFTLI 376
             P N    F LI
Sbjct:   394 PANAAILFFLI 404

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_3518 BA_3518 "drug resistance transporter, Bcr/CflA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
 Identities = 60/248 (24%), Positives = 111/248 (44%)

Query:    55 LYIAGFASSMIFGIVVGSIADKFGRK--LI--CISYGIVYTLCCLTKFSSDFYILLYGRL 110
             +Y AGFA  + F   +G ++D  GR+  ++   + YGI   LC +        +  + + 
Sbjct:    50 VYFAGFALGVFF---IGWLSDIIGRRPAMLFGIVVYGIGSFLCFIANSIEVLLVSRFIQA 106

Query:   111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI 170
             FG  A S++        V  H  + +F    ++   A   F   +  ++ GF    F   
Sbjct:   107 FGASAGSVVTQTILRESVEGHKRHVMFAQ--ISAVIA---FTPAIGPLIGGFLDQMFGFK 161

Query:   171 LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPN-SMFSSLKFLFTNPCLL 229
             +    +   +V I FL     F+         P+T  SS+    ++FS LK L TNP ++
Sbjct:   162 IVFLSLVVMSVGI-FLY---TFVSL-------PETKTSSVTNKINVFSVLKRLITNPKVV 210

Query:   230 TLGIVQSIYEGIMYTFIFVWTPVLEV----LSPPL-GLVFSCFMISIMIGSKIYSILILK 284
             T G++     G+++++ +   P + +    LSP + G +      + +IG+K+   L+  
Sbjct:   211 TYGLLIGGANGVLFSY-YAEAPFIFIEYFRLSPSMYGFLGIVVASASIIGAKVSKRLLAT 269

Query:   285 YFKPETML 292
             Y KPE ++
Sbjct:   270 Y-KPEKII 276

GO:0006855 "drug transmembrane transport" evidence=ISS

GO:0042493 "response to drug" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q921Y4	MFSD5_MOUSE	No assigned EC number	0.3756	0.8795	0.86	yes	N/A
Q0VC03	MFSD5_BOVIN	No assigned EC number	0.3855	0.8795	0.86	yes	N/A
Q28E13	MFSD5_XENTR	No assigned EC number	0.3372	0.9318	0.9070	yes	N/A
Q5R542	MFSD5_PONAB	No assigned EC number	0.3880	0.8795	0.86	yes	N/A
Q6DG19	MFSD5_DANRE	No assigned EC number	0.3403	0.8886	0.8128	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	440
pfam05631	354	pfam05631, DUF791, Protein of unknown function (DU	2e-79
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	4e-10
TIGR00900	365	TIGR00900, 2A0121, H+ Antiporter protein	4e-07
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-05
TIGR00891	405	TIGR00891, 2A0112, putative sialic acid transporte	0.004

>gnl|CDD|114359 pfam05631, DUF791, Protein of unknown function (DUF791)

 Score =  249 bits (638), Expect = 2e-79
 Identities = 129/325 (39%), Positives = 197/325 (60%), Gaps = 12/325 (3%)

Query: 9   TNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGI 68
           T+ +F   +  Y + + +    DW+QGPYVY +Y  YG+ + +I +L+IAGF SSM+FG 
Sbjct: 28  TDPKFNSFKNNYLLVYSMMMAGDWLQGPYVYYLYSSYGFSKGDIGILFIAGFGSSMLFGT 87

Query: 69  VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV 128
           +VGS+ADK GRK  C++Y I+Y L C+TK S ++ +L+ GR  GGIATS+LFS FESW +
Sbjct: 88  IVGSLADKQGRKRACLTYCILYILSCITKHSPNYKVLMIGRFLGGIATSLLFSAFESWLI 147

Query: 129 NEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL 187
            EH N   F  +WL+ TF++A F G+GL AI+SG  A+  AD    GP+APF  A  FL 
Sbjct: 148 AEH-NKRGFSDQWLSTTFSKAAFLGNGLVAIISGLFANLLADRFGFGPVAPFDAAACFLA 206

Query: 188 GSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF 247
                I   W E+Y   + K  L       + + + ++P +  LG+VQS++EG MYTF+F
Sbjct: 207 IGMAIILNTWSENYGDPSDKKDLK-EQFKVAAQAIASDPNVFCLGLVQSLFEGSMYTFVF 265

Query: 248 VWTPVLEVLSP-----PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS 302
           +WTP    LSP     P G +F+ FM++ M+GS + + L+ ++ + E+ + +   L+   
Sbjct: 266 LWTP---ALSPNDEEIPHGFIFATFMLASMLGSSVAARLLQRHLRVESYMQIVFLLSAVC 322

Query: 303 ITVSTVLTSSLFDSRRVLSTNLCFV 327
           +++  ++TS L    +V    L  V
Sbjct: 323 LSLP-IVTSVLVTPSKVKDDGLSLV 346

This family consists of several eukaryotic proteins of unknown function. Length = 354

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 60.5 bits (147), Expect = 4e-10
 Identities = 65/346 (18%), Positives = 125/346 (36%), Gaps = 22/346 (6%)

Query: 21  FIPFFLATFSDWIQGP-YVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG- 78
           F+  FLA     + GP     + +D G     I LL  A      +   + G ++D+FG 
Sbjct: 2   FLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGR 61

Query: 79  RKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP 138
           R+++ I   +      L  F+S  ++LL  R+  G+    LF    +   +       FP
Sbjct: 62  RRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALIAD------WFP 115

Query: 139 VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCW- 197
            E         + G GL A +        A +   G  A F +     L + +       
Sbjct: 116 PEERGRALGLLSAGFGLGAALGPLLGGLLASL--FGWRAAFLILAILALLAAVLAALLLP 173

Query: 198 -EEHYDPKTAKSSLLPNSMFSSLKFLFTNP--CLLTLGIVQSIYEGIMYTFIFVWTPVLE 254
                  +   +   P  +  + K L  +P   LL   ++       + T++ ++  VL 
Sbjct: 174 RPPPESKRPKPAEEAPAPLVPAWKLLLRDPVLWLLLALLLFGFAFFALLTYLPLYQEVLG 233

Query: 255 VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF 314
           + +   GL+     +   IG  +   L  +  +   +L   + L   ++ ++ +  +   
Sbjct: 234 LSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLTE-- 291

Query: 315 DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATIT 360
                 S+    VA L+     G+  P    L   + P++ R T +
Sbjct: 292 ------SSLWLLVALLLLGFGAGLVFPALNALVSDLAPKEERGTAS 331

Length = 346

>gnl|CDD|162098 TIGR00900, 2A0121, H+ Antiporter protein

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 60/323 (18%), Positives = 122/323 (37%), Gaps = 41/323 (12%)

Query: 53  ALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIV--YTLCCLTKFSSDFYI---LLY 107
           +L  +AG    ++   + G++AD++ RK + I   ++    +  L   +    +    +Y
Sbjct: 37  SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVY 96

Query: 108 GRLF-GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSG--LFAIVSGFTA 164
                  IA +     +++   +      L P E   LT A +   +   LF IV     
Sbjct: 97  VLAGILAIAQAFFTPAYQAMLPD------LVPEE--QLTQANSLSQAVRSLFYIVGPGIG 148

Query: 165 HFFADILNLGPI--APFAVAIPFLLGSTLFIYFC---WEEHYDPKTAKSSLLPNSMFSSL 219
                +     I  A +  A+ F + + L I           + +   +++L       +
Sbjct: 149 GL---MYATLGIKWAIWVDAVGFAISA-LLIVSVRIPELAASEIQALSNAVL-RDTREGI 203

Query: 220 KFLFTNPCLLTLGIVQSIY-----EGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIG 274
           KF+  NP L TL ++  ++       I+  F +V +  L   S   G V + F +  ++G
Sbjct: 204 KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLG 263

Query: 275 SKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEI 334
           + +   L+ +YFK   ++T  +++   +I V  +   +           L  V +    +
Sbjct: 264 ALLLG-LLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFP---------LFLVLWFAIGV 313

Query: 335 SVGMYCPVTGYLRGRIIPEKARA 357
             G      G L  R +P +   
Sbjct: 314 GYGPINVPQGTLLQRRVPAELLG 336

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 52/292 (17%), Positives = 104/292 (35%), Gaps = 33/292 (11%)

Query: 24  FFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRK-LI 82
           FFL+     +  P +  + +D G       L+  A      +  ++ G ++D+FGR+ ++
Sbjct: 8   FFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL 67

Query: 83  CISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL 142
            +   +      L  F+S  ++LL GR   G+    L+    +           FP +  
Sbjct: 68  LLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAE------WFPPKER 121

Query: 143 NLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYD 202
                  + G GL A++        A+   LG    F +     L   L + F       
Sbjct: 122 GRALGLFSAGFGLGALLGPLLGGLLAES--LGWRWLFLILAILGLLLALLLLFL------ 173

Query: 203 PKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGL 262
                           L+ L      L   ++   Y G++         VL + +   GL
Sbjct: 174 ----------------LRLLLL--LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGL 215

Query: 263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF 314
           + S F +  ++G+ +  +L  +  +   +L + + LA   + +  +  S   
Sbjct: 216 LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLAL 267

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter

 Score = 39.1 bits (91), Expect = 0.004
 Identities = 37/183 (20%), Positives = 57/183 (31%), Gaps = 38/183 (20%)

Query: 11  MEFKRL---QVRYFIPFFLATFSDWIQGPYVYKVYKD----YGYDEKNIALLYIAGFASS 63
             ++ L   Q   F   +L    D      V  V  +    +G    + A L  A   S 
Sbjct: 1   PWYRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISR 60

Query: 64  MIFGIVVGSIADKFGRKL---ICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIA----- 115
               ++ G   D++GR+L     I      TL C   F+  +  +   RL  GI      
Sbjct: 61  WFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC--GFAPGYITMFIARLVIGIGMGGEY 118

Query: 116 -------------------TSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLF 156
                              + +L SG+    V     Y L  V      + RA F   + 
Sbjct: 119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV-VPVWGDGW-RALFFISIL 176

Query: 157 AIV 159
            I+
Sbjct: 177 PII 179

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 405

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	440
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
PRK05122	399	major facilitator superfamily transporter; Provisi	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
PRK12382	392	putative transporter; Provisional	100.0
PRK09874	408	drug efflux system protein MdtG; Provisional	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
TIGR00897	402	2A0118 polyol permease family. This family of prot	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
PRK15403	413	multidrug efflux system protein MdtM; Provisional	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
PRK10504	471	putative transporter; Provisional	100.0
PRK11195	393	lysophospholipid transporter LplT; Provisional	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
PRK11646	400	multidrug resistance protein MdtH; Provisional	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
PRK03633	381	putative MFS family transporter protein; Provision	100.0
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	100.0
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	100.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	100.0
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	100.0
PRK11043	401	putative transporter; Provisional	100.0
PRK15075	434	citrate-proton symporter; Provisional	100.0
PRK03699	394	putative transporter; Provisional	99.98
PRK10642	490	proline/glycine betaine transporter; Provisional	99.98
PLN00028	476	nitrate transmembrane transporter; Provisional	99.98
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.98
PRK10054	395	putative transporter; Provisional	99.98
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.97
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.97
PRK11010	491	ampG muropeptide transporter; Validated	99.97
PRK09952	438	shikimate transporter; Provisional	99.97
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.97
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.97
PRK10133	438	L-fucose transporter; Provisional	99.97
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.97
PRK15011	393	sugar efflux transporter B; Provisional	99.97
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.97
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.97
PRK03893	496	putative sialic acid transporter; Provisional	99.97
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.97
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.97
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.97
TIGR00898	505	2A0119 cation transport protein.	99.97
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.97
TIGR00895	398	2A0115 benzoate transport.	99.97
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.97
PRK11902	402	ampG muropeptide transporter; Reviewed	99.97
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.97
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.97
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.96
KOG4332|consensus	454		99.96
PRK09528	420	lacY galactoside permease; Reviewed	99.96
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.96
TIGR00901	356	2A0125 AmpG-related permease.	99.96
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.96
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.96
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.96
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.96
KOG1330|consensus	493		99.96
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.96
KOG2532|consensus	466		99.96
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.95
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.95
KOG3764|consensus	464		99.95
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.95
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.95
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.94
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.93
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.93
KOG2533|consensus	495		99.93
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.93
KOG2504|consensus	509		99.93
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.93
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.92
KOG0569|consensus	485		99.92
KOG2615|consensus	451		99.92
PRK10429	473	melibiose:sodium symporter; Provisional	99.92
PRK09669	444	putative symporter YagG; Provisional	99.92
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.9
KOG0254|consensus	513		99.89
PRK09848	448	glucuronide transporter; Provisional	99.89
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.89
PF13347	428	MFS_2: MFS/sugar transport protein	99.89
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.88
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.88
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.88
COG2211	467	MelB Na+/melibiose symporter and related transport	99.88
KOG0255|consensus	521		99.88
PRK11462	460	putative transporter; Provisional	99.88
PTZ00207	591	hypothetical protein; Provisional	99.87
TIGR00805	633	oat sodium-independent organic anion transporter.	99.87
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.85
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.85
KOG0253|consensus	528		99.84
KOG0252|consensus	538		99.84
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.83
KOG2563|consensus	480		99.82
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.82
KOG4686|consensus	459		99.81
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.81
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.71
KOG2325|consensus	488		99.66
KOG2816|consensus	463		99.65
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.61
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.52
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.51
PRK05122	399	major facilitator superfamily transporter; Provisi	99.47
PRK10489	417	enterobactin exporter EntS; Provisional	99.44
PRK15011	393	sugar efflux transporter B; Provisional	99.42
PRK12382	392	putative transporter; Provisional	99.42
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.42
PRK09874	408	drug efflux system protein MdtG; Provisional	99.42
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.41
PRK03633	381	putative MFS family transporter protein; Provision	99.4
PRK09528	420	lacY galactoside permease; Reviewed	99.39
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.39
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.38
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.38
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.38
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.37
PRK10642	490	proline/glycine betaine transporter; Provisional	99.37
PRK09705	393	cynX putative cyanate transporter; Provisional	99.35
PRK03545	390	putative arabinose transporter; Provisional	99.34
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.32
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.31
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.28
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.26
PRK11663	434	regulatory protein UhpC; Provisional	99.26
PRK03893	496	putative sialic acid transporter; Provisional	99.25
PRK03699	394	putative transporter; Provisional	99.25
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.25
KOG3098|consensus	461		99.24
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.24
PRK10054	395	putative transporter; Provisional	99.24
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.21
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.21
TIGR00900	365	2A0121 H+ Antiporter protein.	99.2
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.19
PRK09952	438	shikimate transporter; Provisional	99.19
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.19
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.18
PRK11010	491	ampG muropeptide transporter; Validated	99.18
TIGR00893	399	2A0114 d-galactonate transporter.	99.17
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.17
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.17
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.15
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.14
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.14
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.13
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.13
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.13
PRK10091	382	MFS transport protein AraJ; Provisional	99.12
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.12
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.11
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.11
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.1
TIGR00891	405	2A0112 putative sialic acid transporter.	99.1
PRK10504	471	putative transporter; Provisional	99.1
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.09
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	99.09
TIGR00895	398	2A0115 benzoate transport.	99.09
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.09
PRK15075	434	citrate-proton symporter; Provisional	99.09
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.09
KOG4686|consensus	459		99.08
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.08
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.07
KOG0637|consensus	498		99.05
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.05
TIGR00898	505	2A0119 cation transport protein.	99.04
PRK11902	402	ampG muropeptide transporter; Reviewed	99.04
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.03
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.02
PRK12307	426	putative sialic acid transporter; Provisional	99.01
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.0
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.0
KOG1330|consensus	493		99.0
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.0
KOG3626|consensus	735		99.0
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.0
PLN00028	476	nitrate transmembrane transporter; Provisional	99.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.0
PRK11043	401	putative transporter; Provisional	98.99
PRK10406	432	alpha-ketoglutarate transporter; Provisional	98.98
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.96
PRK11652	394	emrD multidrug resistance protein D; Provisional	98.96
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.96
KOG3762|consensus	618		98.94
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.94
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	98.93
PRK15403	413	multidrug efflux system protein MdtM; Provisional	98.93
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.92
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.92
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	98.91
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	98.91
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.91
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	98.9
KOG3574|consensus	510		98.88
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	98.87
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	98.86
KOG0569|consensus	485		98.84
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.83
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	98.8
TIGR00901	356	2A0125 AmpG-related permease.	98.8
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.79
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.78
KOG3764|consensus	464		98.75
KOG2504|consensus	509		98.75
TIGR00805	633	oat sodium-independent organic anion transporter.	98.74
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.74
PRK09848	448	glucuronide transporter; Provisional	98.73
PRK10133	438	L-fucose transporter; Provisional	98.71
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.7
KOG3810|consensus	433		98.7
PF13347	428	MFS_2: MFS/sugar transport protein	98.68
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.66
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.66
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.64
COG0477	338	ProP Permeases of the major facilitator superfamil	98.63
PRK09669	444	putative symporter YagG; Provisional	98.6
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.58
KOG2532|consensus	466		98.54
PTZ00207	591	hypothetical protein; Provisional	98.51
KOG0253|consensus	528		98.49
KOG2615|consensus	451		98.46
PRK10429	473	melibiose:sodium symporter; Provisional	98.43
KOG3762|consensus	618		98.32
PF12832	77	MFS_1_like: MFS_1 like family	98.32
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	98.27
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.26
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.2
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	98.19
KOG0254|consensus	513		98.16
PRK11462	460	putative transporter; Provisional	98.14
KOG2533|consensus	495		98.1
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	98.1
KOG0255|consensus	521		98.05
COG2211	467	MelB Na+/melibiose symporter and related transport	98.01
KOG2325|consensus	488		97.94
KOG0252|consensus	538		97.93
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	97.81
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	97.76
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	97.7
COG3202	509	ATP/ADP translocase [Energy production and convers	97.69
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	97.58
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.54
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.48
KOG3880|consensus	409		97.37
KOG2816|consensus	463		97.33
KOG1237|consensus	571		97.3
KOG2563|consensus	480		97.28
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	97.18
KOG3097|consensus	390		97.16
KOG2601|consensus	503		97.07
PF12832	77	MFS_1_like: MFS_1 like family	96.84
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.71
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	96.65
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	96.54
KOG1479|consensus	406		96.53
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	96.49
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	96.21
KOG0637|consensus	498		96.15
PRK03612	521	spermidine synthase; Provisional	96.04
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	95.95
PRK03612	521	spermidine synthase; Provisional	95.58
KOG3098|consensus	461		95.21
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	94.89
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	94.73
KOG3626|consensus	735		94.31
COG0477	338	ProP Permeases of the major facilitator superfamil	93.29
KOG1479|consensus	406		92.86
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	91.41
KOG3574|consensus	510		91.31
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	90.35
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	89.97
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	89.38
COG3202	509	ATP/ADP translocase [Energy production and convers	87.87
KOG4830|consensus	412		82.1
KOG1237|consensus	571		80.69

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-35  Score=265.66  Aligned_cols=355  Identities=16%  Similarity=0.178  Sum_probs=286.2

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      .+.+..+.+|++.+|+|+|..+.|++.++......+.+|+...+.||+.||++++..+.++.++ +++++++||+.++++
T Consensus        28 tEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~a  107 (394)
T COG2814          28 TEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLA  107 (394)
T ss_pred             HHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence            4778889999999999999999999666666666666689999999999999999999999999 899999999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      |++.|+..|.+.+...+...      |..|++||++++++...+.+++.++|.++|.++.+.+||  |..|++...+.++
T Consensus       108 R~~~g~a~G~f~~i~~~~a~------~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW--R~~F~~ia~l~ll  179 (394)
T COG2814         108 RALAGLAHGVFWSIAAALAA------RLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW--RATFLAIAVLALL  179 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------HHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH--HHHHHHHHHHHHH
Confidence            99999999999776666666      999999999999999999999999999999999999999  9999999999988


Q ss_pred             HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh-ccC---CchhhHH
Q psy10432        189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE-VLS---PPLGLVF  264 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~g~~~  264 (440)
                      ..+..+..+|  +++.+++   ...+ .++..+++|+|+++...+...+.+.+.+..+++..|+++ ..+   ...++.+
T Consensus       180 ~~~~~~~~lP--~~~~~~~---~~~~-~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~L  253 (394)
T COG2814         180 ALLLLWKLLP--PSEISGS---LPGP-LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVL  253 (394)
T ss_pred             HHHHHHHhCC--CccCCCC---CCcc-hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHH
Confidence            8888888888  2111111   1111 223457788999999999999999999999899999993 333   7889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432        265 SCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG  344 (440)
Q Consensus       265 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  344 (440)
                      ..++++.++|+.+.|++.||  +.++.+.....+..+..+.+... ...  .+      .......+.++..+...+...
T Consensus       254 l~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~-~~~--~~------~~~~~~~~wg~a~~~~~~~~~  322 (394)
T COG2814         254 LAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFT-GAS--PA------LALALLFLWGFAFSPALQGLQ  322 (394)
T ss_pred             HHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHh-cch--HH------HHHHHHHHHHHHhhhhhhHHH
Confidence            99999999999999999995  77777777666666655554221 111  12      233333334444444444444


Q ss_pred             hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ....+. -+|.+..+.+++....|+|..+|..  .+ |...| +.++....+.++...+++..+.....+
T Consensus       323 ~~~a~~-~p~~~~~a~sl~~aa~nlgia~GA~--lG-G~v~~-~~g~~~~~~~~a~l~~~a~~~~~~~~~  387 (394)
T COG2814         323 TRLARL-APDAADLAGSLNVAAFNLGIALGAA--LG-GLVLD-ALGYAATGWVGAALLLLALLLALLSAR  387 (394)
T ss_pred             HHhccc-CCCchHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            555553 3588899999999999999999999  56 88888 799999999999999888887776655

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=6.3e-34  Score=267.09  Aligned_cols=351  Identities=14%  Similarity=0.110  Sum_probs=259.4

Q ss_pred             HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432         32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL  110 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~  110 (440)
                      ....+.+|.+.+|+|.|++++++..+.......+.+++.|+++||+||||++..+..+.+++ ..+.+++|++.+++.|+
T Consensus        26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~  105 (390)
T PRK03545         26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI  105 (390)
T ss_pred             HHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            34556678888999999999999766666666666679999999999999999999999998 78889999999999999


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      ++|++.+...+...+++.      |++|+|||++++++...+.++|..+||++++.+.+++||  |+.|...+...++..
T Consensus       106 ~~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~l~~  177 (390)
T PRK03545        106 GIAFAHAIFWSITASLAI------RVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW--RTTFLAIGGGALITL  177 (390)
T ss_pred             HHHHHHHHHHHHHHHHHH------HhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH--HHHHHHHHHHHHHHH
Confidence            999999988777777777      999999999999999999999999999999999999999  888888777666555


Q ss_pred             HHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHH
Q psy10432        191 LFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSC  266 (440)
Q Consensus       191 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~  266 (440)
                      +......||++++++       + ..++.++.+|||.++......++.....+......+|++ +..+   ...+.....
T Consensus       178 ~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~  249 (390)
T PRK03545        178 LLLIKLLPLLPSEHS-------G-SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLL  249 (390)
T ss_pred             HHHHHhCCCCCCCCc-------c-hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence            555555565432211       1 123456788888887655555444444444334445555 3233   567888888


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432        267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL  346 (440)
Q Consensus       267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  346 (440)
                      ..++.++++++.+++.|| ++++.. ..+......+...+...   .+..+      .......+.+++.+...+.....
T Consensus       250 ~~~~~~~g~~~~g~l~dr-~~~~~~-~~~~~~~~~~~~~l~~~---~~~~~------~~~~~~~l~g~~~~~~~~~~~~~  318 (390)
T PRK03545        250 FGGAGIIGSVLFSRLGNR-HPSGFL-LIAIALLLVCLLLLLPA---ANSEW------HLSVLSIFWGIAIMCIGLAMQVK  318 (390)
T ss_pred             HHHHHHHHHHHHHHHhhc-cchhHH-HHHHHHHHHHHHHHHHH---hchHH------HHHHHHHHHHHHHhcchHHHHHH
Confidence            899999999999999997 886654 33333333333222111   11111      22333334444555555666677


Q ss_pred             hccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        347 RGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +.+..| +.+++++|..+...++|..+||.+.   |.+.| ..+++..|...+.+.+++.+......+
T Consensus       319 ~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~---G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~  381 (390)
T PRK03545        319 VLKLAP-DATDVAMALFSGIFNIGIGAGALLG---NQVSL-HLGLSSIGYVGAALALAALVWSILIFR  381 (390)
T ss_pred             HHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence            777755 6889999999999999999999944   78888 889999999998888887776655544

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.2e-34  Score=252.51  Aligned_cols=374  Identities=15%  Similarity=0.157  Sum_probs=281.2

Q ss_pred             HHHHHHHHHHHHHHH----HHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhH
Q psy10432         16 LQVRYFIPFFLATFS----DWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGI   88 (440)
Q Consensus        16 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~   88 (440)
                      .+.+.+...++...+    .-.+....|.+.+|.++|.+|+|.   .+.+.|.++-+   +.|.++||.+.|+.+..+++
T Consensus        26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf---~~G~~sDr~npr~fm~~gLi  102 (448)
T COG2271          26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKF---VMGVLSDRSNPRYFMAFGLI  102 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---HhhhhcccCCCceeehHHHH
Confidence            333344444444443    444667788889999999999997   56667777766   99999999999999999999


Q ss_pred             HHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH--H
Q psy10432         89 VYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTA--H  165 (440)
Q Consensus        89 ~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~  165 (440)
                      +.++. ++++++++.+.+.+..+++|..+|...|.+...+.      +|++++|||+..++++...++|..+.|++.  +
T Consensus       103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~------~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la  176 (448)
T COG2271         103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTIT------HWFSRKERGTWWSIWNTSHNIGGALAPLVALLA  176 (448)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHH------HHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence            99999 89999999999999999999999999998887777      999999999999999999999999999988  8


Q ss_pred             HHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCC---------c--c--CCCCcc----chhhhhhhhccCcch
Q psy10432        166 FFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKT---------A--K--SSLLPN----SMFSSLKFLFTNPCL  228 (440)
Q Consensus       166 ~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---------~--~--~~~~~~----~~~~~~~~~~~~~~~  228 (440)
                      ++..+.+|  |..|+..+++.++..++.++..+|+|++..         +  +  ++++..    ....-++.+++||.+
T Consensus       177 ~~~~~~~w--~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~i  254 (448)
T COG2271         177 FFAFHGGW--RAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLI  254 (448)
T ss_pred             HHHhccch--hHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHH
Confidence            88888889  999999999999888888888888775210         0  0  000000    112245678999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHhhhhhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHHHHHHHHHH
Q psy10432        229 LTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLTVYLATFS  302 (440)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~~~~~~~~~  302 (440)
                      |.+.+...+.+..-+.... |.|+|  +..+   ..++...+.+-.+++.|+++.|+++||.+ |||....+.+.+....
T Consensus       255 W~la~a~vfvYivR~gi~d-W~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~  333 (448)
T COG2271         255 WLLALANVFVYVVRYGIND-WGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITA  333 (448)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence            9999999999999998865 99988  4443   77888899999999999999999999822 3333333322222222


Q ss_pred             HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhh--hHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhh
Q psy10432        303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP--VTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIK  379 (440)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~  379 (440)
                      .+..  +...++.+...     ....+  +..++-++.|  .......|..|++..|++.|+...+.++ |...+...+ 
T Consensus       334 ~~~~--~w~~~~~~~~l-----~~~~l--~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~-  403 (448)
T COG2271         334 SLVL--YWLAPNGSYLL-----DAILL--FIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL-  403 (448)
T ss_pred             HHHH--HHcCCCccHHH-----HHHHH--HHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc-
Confidence            2222  22222222211     22222  2222333444  5556778999999999999999999999 666766633 


Q ss_pred             ccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        380 NEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                        +.+.| ..||...|.+..+..+++.++.....+
T Consensus       404 --g~i~d-~~gW~g~Fi~~~~~a~l~~lll~~~~~  435 (448)
T COG2271         404 --GYIAD-TWGWDGGFIVLSIAALLAILLLLPVWN  435 (448)
T ss_pred             --eeeEe-cCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence              78888 689999999988888887777665554

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=1.1e-32  Score=258.13  Aligned_cols=344  Identities=14%  Similarity=0.129  Sum_probs=253.9

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      +....+.+|++.+++|.+++++++..++......+.+|+.|+++||+|||++++.+.++.+++ +++.+++|++.+++.|
T Consensus        36 ~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r  115 (394)
T PRK10213         36 EFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR  115 (394)
T ss_pred             HHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence            334456788888999999999999777777777777789999999999999999999999998 6778889999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      +++|++.+...|...+++.      |++|+|+|++++++.....++|..+||.+++.+.+++||  |+.|++...+.++.
T Consensus       116 ~l~G~~~g~~~~~~~~~i~------~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~l~~~~  187 (394)
T PRK10213        116 ACLGLALGGFWAMSASLTM------RLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW--RNVFNAAAVMGVLC  187 (394)
T ss_pred             HHHHHhhHHHHHHHHHHHH------HHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH--HHHHHHHHHHHHHH
Confidence            9999999998887777776      999999999999999999999999999999999999999  88887776655544


Q ss_pred             HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHH
Q psy10432        190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFS  265 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~  265 (440)
                      .+......||+++++++    .    .+..++.+++|.++...+..++.....+......+|.+ +..+   ...+..+.
T Consensus       188 ~l~~~~~~p~~~~~~~~----~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~  259 (394)
T PRK10213        188 IFWIIKSLPSLPGEPSH----Q----KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLL  259 (394)
T ss_pred             HHHHHHHCCCCCccccc----c----hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHH
Confidence            44444455665322111    1    12345677888888766655555555555545455666 4333   55788888


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHh
Q psy10432        266 CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGY  345 (440)
Q Consensus       266 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  345 (440)
                      ..+++.++++.+.+++.|| .++ +.+..+..........+...   ....+      .......+.+++.+...+...+
T Consensus       260 ~~~~~~iig~~~~~~l~~r-~~~-~~l~~~~~~~~~~~~~l~~~---~~~~~------~~~~~~~l~G~~~~~~~~~~~~  328 (394)
T PRK10213        260 SFGIASFVGTSLSSFILKR-SVK-LALAGAPLVLAVSALVLTLW---GSDKI------VATGVAIIWGLTFALVPVGWST  328 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhc-cch-hHHHHHHHHHHHHHHHHHHH---hhhHH------HHHHHHHHHHHHHHhhhHHHHH
Confidence            8999999999999999997 543 43333333322222222111   11112      2334445566677788888888


Q ss_pred             HhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432        346 LRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL  406 (440)
Q Consensus       346 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (440)
                      .+++..| +++++..+......+++..+|+.+.   |.+.| ..++...+..+++..++..
T Consensus       329 ~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~---G~l~~-~~g~~~~~~~~~~~~~~~~  384 (394)
T PRK10213        329 WITRSLA-DQAEKAGSIQVAVIQLANTCGAAIG---GYALD-NIGLTSPLMLSGTLMLLTA  384 (394)
T ss_pred             HHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccChhhHHHHHHHHHHHHH
Confidence            8888877 5566777877788889999999944   77888 7888888888776555443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=6.2e-33  Score=262.16  Aligned_cols=356  Identities=18%  Similarity=0.094  Sum_probs=252.5

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ....+...|.+.+++|.|+++++++.+...+...+..++.|+++||+|||+++..+.++..++ .++.++++++.+++.|
T Consensus        31 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (406)
T PRK11551         31 LQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVAR  110 (406)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            344667778888999999999999888777777777789999999999999999999888887 6788889999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      ++.|++.+...+...+++.      |++|+++|++++++.+.+..+|..+++.+++.+.+..+|  +..+++.....++.
T Consensus       111 ~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  182 (406)
T PRK11551        111 LLTGVGLGGALPNLIALTS------EAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW--RHIFYVGGVGPLLL  182 (406)
T ss_pred             HHHHhhHHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH--HHHHHHHHHHHHHH
Confidence            9999999998787777777      999999999999999999999999999999988888888  88887766555544


Q ss_pred             HHHHHHhccccCCCCCccCC-CCccchhhhhhhhccC---cchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cchh
Q psy10432        190 TLFIYFCWEEHYDPKTAKSS-LLPNSMFSSLKFLFTN---PCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLG  261 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g  261 (440)
                      .++....+||+++.++++++ ...++   ..+..+++   +..+.......+.....+.... +.|.+ +..+   .+.+
T Consensus       183 ~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~g~s~~~~~  258 (406)
T PRK11551        183 VPLLMRWLPESRAFAQAAGAGKQRAP---VLRALFGEGRATATLLLWISYFFTLIVLYFLLN-WLPSLLVGQGLSRSQAG  258 (406)
T ss_pred             HHHHHHhCCCChhHHhccCcchhhhh---hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCChhhhh
Confidence            55555567886543222111 01111   11222222   2233333333333333333333 44444 3333   6678


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhh
Q psy10432        262 LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP  341 (440)
Q Consensus       262 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  341 (440)
                      .......++.++++++.|++.|| +++++.+..+.....++.+.+ ...  ++ .+      ...+...+.+++.+...+
T Consensus       259 ~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~--~~-~~------~~~~~~~~~g~~~~~~~~  327 (406)
T PRK11551        259 LVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAAL-AAA--PS-FA------GMLLAGFAAGLFVVGGQS  327 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHH-Hhc--Cc-HH------HHHHHHHHHHHHHHhHHH
Confidence            88889999999999999999998 998888776555554444333 111  11 11      122333344444555677


Q ss_pred             hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ...++..+..|+++|+++.|+.+...+++..++|.+.   |.+.+...++...+.....+.+++.+..+..
T Consensus       328 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~---g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        328 VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA---GQLLALGRSTVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhH---hhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            7888899999999999999999999999999999954   6666633455666666665655555554443

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=1.2e-32  Score=258.13  Aligned_cols=351  Identities=11%  Similarity=0.060  Sum_probs=252.8

Q ss_pred             HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432         32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL  110 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~  110 (440)
                      ....+.+|.+.+|+|+|.++.+++.+.......+.+++.|+++||+|||+++..+..+.+++ .++++++|++.+++.|+
T Consensus        26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~  105 (393)
T PRK09705         26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL  105 (393)
T ss_pred             hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence            45778899999999999999999888777777777789999999999999999999999999 78999999999999999


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~~  189 (440)
                      ++|++.+...+...+.+.      |++| ++|+++++....+...|..+|+.+++.+.++. +|  |..+.......++.
T Consensus       106 l~Gig~~~~~~~~~~~~~------~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w--~~~~~~~~~~~~~~  176 (393)
T PRK09705        106 LGGVGIGIIQAVMPSVIK------RRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW--YQTLAWWALPAVVA  176 (393)
T ss_pred             HHHhHHHHHhhhhhHHHH------HHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHH
Confidence            999999998776555555      8886 78999999999999999999999999998875 78  66554433333322


Q ss_pred             HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHH
Q psy10432        190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSC  266 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~  266 (440)
                      . +.++...+++++++++   ++.    ..++.+++|+.+...+...+.....+......++++++++   .+.+...+.
T Consensus       177 ~-~~~~~~~~~~~~~~~~---~~~----~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~  248 (393)
T PRK09705        177 L-FAWWWQSAREVASSHK---TTT----TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLAL  248 (393)
T ss_pred             H-HHHHHHhcCCCccccC---CCc----CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHH
Confidence            2 2222222221111111   111    1234556777777666665555555555554555554444   667888999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432        267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL  346 (440)
Q Consensus       267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  346 (440)
                      ..++.++++++.+++.|| .++++....+..+..++...+...   +....      ...  ..+.+++.+...|.....
T Consensus       249 ~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~------~~~--~~l~g~g~g~~~~~~~~~  316 (393)
T PRK09705        249 MTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWL---PLQLP------VLW--AMVCGLGLGGAFPLCLLL  316 (393)
T ss_pred             HHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHc---cchHH------HHH--HHHHHHhccchHHHHHHH
Confidence            999999999999999997 999988887776666655443211   11111      111  123344566666766555


Q ss_pred             hccCC-cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        347 RGRII-PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       347 ~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ..+.. |++++++.+|+.+...+++..++|.+.   +.+.|...++...|.+.+++++...+.......
T Consensus       317 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~---G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  382 (393)
T PRK09705        317 ALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFS---GVLRSISGNYLMDWAFHALCVVGLMIITLRFAP  382 (393)
T ss_pred             HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence            55555 467899999999999999999999955   777773334788888887777766665555444

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=1e-32  Score=264.51  Aligned_cols=362  Identities=13%  Similarity=0.056  Sum_probs=247.3

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh-----hcccchhHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL-----TKFSSDFYI  104 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~-----~~~~~~~~~  104 (440)
                      ....++..|++.+|+|.|.++.|++.+.......+.+++.|+++||+|||+++..+.++.++. ..     +..+++++.
T Consensus        45 r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (467)
T PRK09556         45 RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGL  124 (467)
T ss_pred             hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence            445667788888999999999999776666666666679999999999999998887776665 33     334789999


Q ss_pred             HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCchhhHHH
Q psy10432        105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL---NLGPIAPFAV  181 (440)
Q Consensus       105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---gw~~~~~~~~  181 (440)
                      +++.|+++|++.+...|...+.+.      |++|+++|++++|+.+.+.++|.++++.+..++.+..   +|  +..|.+
T Consensus       125 l~~~r~l~G~~~~~~~~~~~~~i~------~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~--~~~f~~  196 (467)
T PRK09556        125 MIALWALSGFFQSTGGPCSYSTIT------RWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV--IGMFIF  196 (467)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHH------HHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc--hhHHHH
Confidence            999999999999998887666666      9999999999999999999999999999988777653   46  767766


Q ss_pred             HHHHHHHHHHHHHHhccccCCCCC---------cc--CCC---Ccc--chhhhh-hhhccCcchHHHHHHHHHHHhHHHH
Q psy10432        182 AIPFLLGSTLFIYFCWEEHYDPKT---------AK--SSL---LPN--SMFSSL-KFLFTNPCLLTLGIVQSIYEGIMYT  244 (440)
Q Consensus       182 ~~~~~~~~~~~~~~~~~e~~~~~~---------~~--~~~---~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  244 (440)
                      .+.+.++..++.++..+|++++.+         ++  ++.   +.+  +..+.+ +..++||.+|...+..++.+...+.
T Consensus       197 ~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  276 (467)
T PRK09556        197 PSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIG  276 (467)
T ss_pred             HHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence            665555444544555555432110         00  000   000  111112 2367889999888877777766665


Q ss_pred             HHHhhhhhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhh
Q psy10432        245 FIFVWTPVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRV  319 (440)
Q Consensus       245 ~~~~~~~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (440)
                      .. .|.|.|  +.++   .+.+.......++.+++.++.|+++|| +++|+...............+ .... ... .. 
T Consensus       277 ~~-~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~~~~~-~~~~-~~~-~~-  350 (467)
T PRK09556        277 ID-NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALIIFTLG-VYQH-ATS-EY-  350 (467)
T ss_pred             HH-HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHHHHH-HHHh-cCc-HH-
Confidence            53 456654  4444   566777888889999999999999998 998877655443333322111 1111 111 11 


Q ss_pred             cchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhhccccccCc-----------
Q psy10432        320 LSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIKNEDAEGGK-----------  387 (440)
Q Consensus       320 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~-----------  387 (440)
                          .......+.+++.............|..|++.+|++.|+.+...++ |..++|.++   |.+.|.           
T Consensus       351 ----~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~---G~i~~~~~~g~~~~~~~  423 (467)
T PRK09556        351 ----MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGL---GMIADPTKNGTPIFGYT  423 (467)
T ss_pred             ----HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhH---HHHhccccccccccccc
Confidence                1222222222211111112235566889999999999999999997 668888855   555551           


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        388 LIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      ..+|+..|.+..++.+++.+..+.++
T Consensus       424 ~~~~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        424 LTGWAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHHHHH
Confidence            35689999888888887766665553

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=100.00  E-value=4.1e-32  Score=255.88  Aligned_cols=362  Identities=12%  Similarity=0.071  Sum_probs=252.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhhHhhh-HhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh
Q psy10432         18 VRYFIPFFLATFSDWIQGPYVYKV-YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL   95 (440)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~   95 (440)
                      .......++..++.++..|.+|.. .+++|.|+.++|++.++......+.+|+.|+++||+||||+++.+.++.+++ ..
T Consensus        18 ~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~   97 (399)
T PRK05122         18 VSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL   97 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH
Confidence            334455566666778888888763 4789999999999888888888888899999999999999999999888775 43


Q ss_pred             hcc---c-----chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         96 TKF---S-----SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFF  167 (440)
Q Consensus        96 ~~~---~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l  167 (440)
                      +.+   .     .+++.+++.|+++|++.+...+...+++.      |+.|+|+|++++++.+....+|.++||.+++.+
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l  171 (399)
T PRK05122         98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGI------GRVGALHTGRVISWNGIATYGALAIGAPLGVLL  171 (399)
T ss_pred             HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHH------hhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence            322   2     25678899999999999999887777777      999999999999999999999999999999999


Q ss_pred             HhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432        168 ADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF  247 (440)
Q Consensus       168 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (440)
                      .+.+||  +..+.+.....++..+ .....||++++  ++   ++++    +++.++  +.+.......+..........
T Consensus       172 ~~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~---~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~  237 (399)
T PRK05122        172 YHWGGL--AGLGLLIMLLALLGLL-LARPRPAVPPV--KG---ERLP----FRRVLG--RVWPYGMGLALASIGFGTIAT  237 (399)
T ss_pred             HHcccH--HHHHHHHHHHHHHHHH-HHhcCCCCCCC--Cc---cchh----HHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence            999999  7666655544332222 22222222111  11   1111    222222  112211111122222222222


Q ss_pred             hhhhhhhccC-CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432        248 VWTPVLEVLS-PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF  326 (440)
Q Consensus       248 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (440)
                      ..+.++.+.+ ...+.......++.+++.++.+++.|| +++++.+..+.....++...+ ...   ...+      ...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~  306 (399)
T PRK05122        238 FITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLL-WLA---PSPW------MAL  306 (399)
T ss_pred             HHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH-HHh---ccHH------HHH
Confidence            2233333333 455677778888899999999999997 999888777766666655443 211   1111      233


Q ss_pred             HHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432        327 VAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL  406 (440)
Q Consensus       327 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (440)
                      ....+.+++.+...|.......+..|+++||++.|+.+...++|..+++.+.   +.+.+ ..+++..+...+++.+++.
T Consensus       307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~~~~~~~~~~~~~  382 (399)
T PRK05122        307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLA---GLVAS-WFGYPSIFLAAALAALLGL  382 (399)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HcCHHHHHHHHHHHHHHHH
Confidence            4444566667777777777777888999999999999999999999988844   66777 7789999998888877777


Q ss_pred             HHHHHhhh
Q psy10432        407 LASCVFKR  414 (440)
Q Consensus       407 ~~~~~~~~  414 (440)
                      +.....++
T Consensus       383 ~~~~~~~~  390 (399)
T PRK05122        383 ALTWLLYR  390 (399)
T ss_pred             HHHHHhcc
Confidence            66655544

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=2.9e-32  Score=258.89  Aligned_cols=361  Identities=12%  Similarity=0.010  Sum_probs=250.0

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF  111 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l  111 (440)
                      .....+|.+.+++|.|+++.+++.+...+...+.+++.|+++||+|||+++..+.++.+++ .+..++++++.+++.|++
T Consensus        41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  120 (434)
T PRK11663         41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVL  120 (434)
T ss_pred             hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            4567788888999999999999777777777777789999999999999999999999998 678889999999999999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      .|++.+...+...+++.      |++|+++|++++++.+.+.++|..++|.+++.+.+.+||  |+.|.+.++..++..+
T Consensus       121 ~g~~~g~~~~~~~~~~~------~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw--~~~f~~~~i~~~~~~~  192 (434)
T PRK11663        121 NAFFQGWGWPVCAKLLT------AWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW--RYGMMIAGIIAIVVGL  192 (434)
T ss_pred             HHHHHHccchHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH--HHHHHHHHHHHHHHHH
Confidence            99999988776666666      999999999999999999999999999999999998899  8888777665554444


Q ss_pred             HHHHhccccCCCCC---------c--cCCCC----ccchhhhhh-hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-h
Q psy10432        192 FIYFCWEEHYDPKT---------A--KSSLL----PNSMFSSLK-FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-E  254 (440)
Q Consensus       192 ~~~~~~~e~~~~~~---------~--~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  254 (440)
                      +..+.+||++++.+         +  +.+++    ..+.++.++ ..+++|.++...+...+.+..........++++ +
T Consensus       193 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  272 (434)
T PRK11663        193 FLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSE  272 (434)
T ss_pred             HHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44555666543210         0  00000    001111122 356778888776666555555544444334444 3


Q ss_pred             ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc--CCchhHH-HHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432        255 VLS---PPLGLVFSCFMISIMIGSKIYSILILKYF--KPETMLT-LTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       255 ~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                      ..+   .+.+...+...++.++++++.|++.|| +  ++|+... .......+....+ ......  ....     ....
T Consensus       273 ~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-----~~~~  343 (434)
T PRK11663        273 TLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGILLSVGSL-WLMPFA--SYVM-----QAAC  343 (434)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHHHHHHHHH-HHcccc--cHHH-----HHHH
Confidence            333   567778888889999999999999998 7  2333322 2222222222122 111111  1111     1111


Q ss_pred             HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      ....++..............|..|+++||++.|+.++..++|..++|.++   +.+.| ..+++..|...+++.+++.+.
T Consensus       344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~---g~l~~-~~g~~~~f~~~~~~~~~~~~~  419 (434)
T PRK11663        344 FFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPL---AKVLE-IWHWTGFFVVISIAAGISALL  419 (434)
T ss_pred             HHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccH---HHHHH-hcccHHHHHHHHHHHHHHHHH
Confidence            11111111111122344567888999999999999999999999999955   77778 788999999888887777665


Q ss_pred             HHHhhh
Q psy10432        409 SCVFKR  414 (440)
Q Consensus       409 ~~~~~~  414 (440)
                      .+...+
T Consensus       420 ~~~~~~  425 (434)
T PRK11663        420 LLPFLN  425 (434)
T ss_pred             HHHHHh
Confidence            554443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=100.00  E-value=1.5e-31  Score=252.50  Aligned_cols=337  Identities=11%  Similarity=0.069  Sum_probs=246.0

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      +..+..|.++.+.+++|.|+.+.++..+...+...+..++.|+++||+||||++..+.....++ ....++++++.+++.
T Consensus        28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  107 (406)
T PRK15402         28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLL  107 (406)
T ss_pred             hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence            3566777888888999999999998777777666676789999999999999999999888888 677888999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      |+++|++.+...+...+.+.      |.+|+++|.+..++......+|..+||.+++.+.++.+|  +..+++.+...++
T Consensus       108 ~~l~G~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w--~~~~~~~~~~~~~  179 (406)
T PRK15402        108 RFLQGIGLCFIGAVGYAAIQ------ESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW--RGMFVLFAALAAL  179 (406)
T ss_pred             HHHHHhHhhhHHHHHHHHHH------HHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc--cHHHHHHHHHHHH
Confidence            99999999887666656666      999999999999999888889999999999999998899  7777776666665


Q ss_pred             HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHH
Q psy10432        189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVF  264 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~  264 (440)
                      ..+..++..||++++++++  .+.++..++++.+++||+++...+...+.......+....+.++ +..+   .+.+...
T Consensus       180 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~  257 (406)
T PRK15402        180 SFFGLWRAMPETAGRVGEK--LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQ  257 (406)
T ss_pred             HHHHHHHhCCCCCcccccc--ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHH
Confidence            5555555667765432221  12234456778889999988876666555544444433233333 3233   4566666


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432        265 SCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG  344 (440)
Q Consensus       265 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  344 (440)
                      ....++.+++.++.+++.|| .++++.+..+.....++...+..........+.     .......+.+++.+...+...
T Consensus       258 ~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~g~g~~~~~~~~~  331 (406)
T PRK15402        258 VPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGLLLAALATVISSHAYL-----WLTAGLSLYAFGIGLANAGLY  331 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHcccccHH-----HHHHHHHHHHHHHHHHhhhHH
Confidence            77777888999999999997 999888887776666555444221111111111     234455556666666666555


Q ss_pred             hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432        345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  386 (440)
                      ...... +++++|++.+..+....++..+++.+.   +.+.+
T Consensus       332 ~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~---~~l~~  369 (406)
T PRK15402        332 RLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELS---KHAYL  369 (406)
T ss_pred             HHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHH---Hhccc
Confidence            555444 458999999999999999999999844   55555

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=2.7e-32  Score=258.42  Aligned_cols=363  Identities=13%  Similarity=0.099  Sum_probs=259.2

Q ss_pred             HHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-
Q psy10432         20 YFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-   97 (440)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-   97 (440)
                      .+...++..++.++..+.+|.+.++++.++.+.|++.....+...+.+++.|+++||+|||+++..+..+.+++ .... 
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~  101 (417)
T PRK10489         22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL  101 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence            33444566666777888887777888889999999888777777777789999999999999998887777665 3222 


Q ss_pred             ----ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432         98 ----FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus        98 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                          ..++++.+++.|++.|++.+...++..+.+.      |+.|+++|+++.++.....++|..+||.+++.+.+..+|
T Consensus       102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~  175 (417)
T PRK10489        102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATP------ALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGV  175 (417)
T ss_pred             HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh------hccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhh
Confidence                2567889999999999999888776666666      999999999999999999999999999999999998888


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432        174 GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL  253 (440)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (440)
                        ++.+.+.....++..+ ....+||++++++++ +...++.++.++.++++|.++...+...+... ...... +.|.+
T Consensus       176 --~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~p~~  249 (417)
T PRK10489        176 --AWNYGLAAAGTFITLL-PLLRLPALPPPPQPR-EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRV-LYPAL  249 (417)
T ss_pred             --HHHHHHHHHHHHHHHH-HHHhCCCCCCCCccc-ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHH-hhHHH
Confidence              6666666555544333 344567654332221 11233445567778888887665544433222 222323 33444


Q ss_pred             -hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432        254 -EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       254 -~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                       ++ .+   ...+++.+...++.+++.++.+++.|| .++++.+..+..+..++.+.+ ..  .++  +.     .....
T Consensus       250 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~-~~--~~~--~~-----~~~~~  318 (417)
T PRK10489        250 ADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLF-GL--MPM--WI-----LAVLC  318 (417)
T ss_pred             HHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHH-Hc--cch--HH-----HHHHH
Confidence             33 33   567888889999999999999999996 777777766666555554333 21  111  11     23344


Q ss_pred             HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      ..+.+++.+...+...+++++..|++.||+++|+.+...++|..++|.+.   |.+.+ ..++...+...+++.++..++
T Consensus       319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~---G~l~~-~~g~~~~~~~~~~~~~~~~~~  394 (417)
T PRK10489        319 LALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL---GGLGA-MMTPVASASASGFGLLIIGVL  394 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH---HHHHH-HhchhhHHHHHHHHHHHHHHH
Confidence            44555556666677778899999999999999999999999999999955   77777 777777777666554444333


Q ss_pred             H
Q psy10432        409 S  409 (440)
Q Consensus       409 ~  409 (440)
                      .
T Consensus       395 ~  395 (417)
T PRK10489        395 L  395 (417)
T ss_pred             H
Confidence            3

>PRK12382 putative transporter; Provisional

Probab=100.00  E-value=1e-31  Score=252.46  Aligned_cols=359  Identities=12%  Similarity=0.109  Sum_probs=250.4

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhh-HhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh-
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKV-YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL-   95 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~-   95 (440)
                      ......+...++.++..|.+|.. .+|+|.|++++|++.++......+.+|++|+++||+||||+++.+.+...++ +. 
T Consensus        19 ~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~   98 (392)
T PRK12382         19 RIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY   98 (392)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence            34444555566677788888654 4789999999999999988888888899999999999999999887776654 22 


Q ss_pred             --hc-----ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         96 --TK-----FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus        96 --~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                        ..     ..++++.+++.|+++|++.+...+...+++.      |+.|+|+|++++++.+.+.+.|..+||++++.+.
T Consensus        99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~  172 (392)
T PRK12382         99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGL------GLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH  172 (392)
T ss_pred             HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence              21     1357889999999999999988777666777      9999999999999999999999999999999999


Q ss_pred             hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432        169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV  248 (440)
Q Consensus       169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (440)
                      ++.||  +..+.+.....++... .....||.++++  +   ++++.++..+.+++ +.+.     ..+...........
T Consensus       173 ~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~-----~~l~~~~~~~~~~~  238 (392)
T PRK12382        173 SHFGF--AALALTTMVLPLLAWA-FNGTVRKVPAHA--G---ERPSLWSVVGLIWK-PGLG-----LALQGVGFAVIGTF  238 (392)
T ss_pred             hccCh--HHHHHHHHHHHHHHHH-HHHhccCCCCCc--c---cCchHHHHHHHHHH-hHHH-----HHHHHHHHhHHHHH
Confidence            98899  6655544433322221 122223322211  1   11122222222222 2211     11111122222222


Q ss_pred             hhhhhhccC-CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        249 WTPVLEVLS-PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       249 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      .++++++.+ ...+.......++.+++++..|++.|| +++++.+..+..+..++.+.+ ...  ++ .+      ....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~--~~-~~------~~~~  307 (392)
T PRK12382        239 VSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLL-WLA--PT-AW------VALA  307 (392)
T ss_pred             HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHH-HHc--cc-HH------HHHH
Confidence            334444333 445666777788888999999999997 999998887777666665443 221  11 11      2334


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+.+++.+...|.......+..|+++||++.|+.+...+++..++|.+.   +.+.+ ..+++..|...+++.+++.+
T Consensus       308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~---g~l~~-~~g~~~~~~~~~~~~~~~~~  383 (392)
T PRK12382        308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLA---GMLAT-SFGYPSVFLAGAISAVLGII  383 (392)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCchHHHHHHHHHHHHHHH
Confidence            444556667777787778888888999999999999999999999999854   77777 78899999999888777766


Q ss_pred             HHHHh
Q psy10432        408 ASCVF  412 (440)
Q Consensus       408 ~~~~~  412 (440)
                      .....
T Consensus       384 ~~~~~  388 (392)
T PRK12382        384 VTILS  388 (392)
T ss_pred             HHHhh
Confidence            65543

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=100.00  E-value=8.5e-32  Score=254.76  Aligned_cols=365  Identities=15%  Similarity=0.152  Sum_probs=260.9

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhh-----HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKN-----IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL   95 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~   95 (440)
                      ...+....+..+..+++|.+.+++|.+..+     .+++.++..+...+.+|+.|+++||+|||+.++.+.++.+++ .+
T Consensus        21 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~  100 (408)
T PRK09874         21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL  100 (408)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH
Confidence            444555556777889998888999988654     367788888888888899999999999999999999888888 67


Q ss_pred             hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q psy10432         96 TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGP  175 (440)
Q Consensus        96 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~  175 (440)
                      +.+.++++.+++.|++.|++.+. .+...+.+.      |..|+++|++++++......+|..++|.+++.+.+..+|  
T Consensus       101 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--  171 (408)
T PRK09874        101 MGLAQNIWQFLILRALLGLLGGF-VPNANALIA------TQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGL--  171 (408)
T ss_pred             HHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHH------HhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--
Confidence            77889999999999999998664 465555555      999999999999999999999999999999999998899  


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHH-HHHHHhHHHHHHHhhhhhhh
Q psy10432        176 IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIV-QSIYEGIMYTFIFVWTPVLE  254 (440)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  254 (440)
                      +..+.+.....++..+...+..||++++++++   +..+.+ +..+.+++|+++..... ...............+++..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (408)
T PRK09874        172 RPVFFITASVLFLCFLVTLFCIRENFQPVSKK---EMLHMR-EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVR  247 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCcccccch---hhhHHH-HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88887777666655555556667654332221   111112 23345667776553322 22222222222222222222


Q ss_pred             c-cC--C----chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        255 V-LS--P----PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       255 ~-~~--~----~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      . .+  .    ..+......+++.+++.+..|++.|| +++++.+..+.....+..+.. ...   ...+      ....
T Consensus       248 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~~  316 (408)
T PRK09874        248 ELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPM-SFV---QTPL------QLGI  316 (408)
T ss_pred             HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHH-HHh---ccHH------HHHH
Confidence            1 11  1    23455566778888899999999997 999998887776655544333 211   1111      2333


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+.+++.+...|...+...+..|++.+|+.++..+...++|..++|.+.   |.+.+ ..+++..|.+.+++.+++.+
T Consensus       317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~---G~l~~-~~g~~~~f~~~~~~~l~~~~  392 (408)
T PRK09874        317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMG---AAISA-NYGFRAVFLVTAGVVLFNAV  392 (408)
T ss_pred             HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHH---HHHHh-hcchhHHHHHHHHHHHHHHH
Confidence            444556667778888888888888999999999999999999999999943   77777 78899999999888888776


Q ss_pred             HHHHhhh
Q psy10432        408 ASCVFKR  414 (440)
Q Consensus       408 ~~~~~~~  414 (440)
                      ..+...+
T Consensus       393 ~~~~~~~  399 (408)
T PRK09874        393 YSWNSLR  399 (408)
T ss_pred             HHHHHHH
Confidence            6654443

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=2.3e-32  Score=255.86  Aligned_cols=353  Identities=15%  Similarity=0.081  Sum_probs=261.2

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      .....+..|.+.+++|.|+++++++.++......+.+|+.|+++||+|||+++..+.++.+++ .++++++|++.+++.|
T Consensus        19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (377)
T TIGR00890        19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY   98 (377)
T ss_pred             HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334667888888999999999999888888888888889999999999999999999999998 7888999999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      ++.|++.+...+.....+.      +++| |+|+++.++...+.++|..+++++.+.+.+..||  |+.|++.++..++.
T Consensus        99 ~~~g~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~f~~~~~~~~~~  169 (377)
T TIGR00890        99 GLASAGVGIAYGIALNTAV------KWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGV--PAAFIYMGIIFLLV  169 (377)
T ss_pred             HHHhHHHHHHHHhHHHHHH------HHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccH--HHHHHHHHHHHHHH
Confidence            9999999987665555544      7775 6899999999999999988877777777777788  88888877776666


Q ss_pred             HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHH
Q psy10432        190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSC  266 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~  266 (440)
                      .+..++..||++++++++++ +.++...+.++.+++|+++...+...+...........++++.+..+   .+.+.....
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (377)
T TIGR00890       170 IVLGAFLIGYPPGQLIKTNI-EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSI  248 (377)
T ss_pred             HHHHHHheecCchhccccCc-ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            65555566655433222111 11111234567788888887665555444443333333444433333   456778888


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432        267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL  346 (440)
Q Consensus       267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  346 (440)
                      ..++.++++++.+++.|| +++|+.+..+.....++.+.+ ......   ...    .......+.+++.|...+....+
T Consensus       249 ~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~----~~~~~~~~~g~~~g~~~~~~~~~  319 (377)
T TIGR00890       249 SSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAM-LFIPML---NDV----LFLATVALVFFTWGGTISLFPSL  319 (377)
T ss_pred             HHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHH-HHcccc---hhH----HHHHHHHHHHHHhccchhccHHH
Confidence            899999999999999998 999988887777666665444 221111   111    12222334445566666677778


Q ss_pred             hccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432        347 RGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL  406 (440)
Q Consensus       347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (440)
                      ..|..|+++|++..|+.+...++|..++|.+.   +.+.+ ..+++..|.+.+++.+++.
T Consensus       320 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       320 VSDIFGPANSAANYGFLYTAKAVAGIFGGLIA---SHALT-EIGFEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH---HHHHh-hhchhhHHHHHHHHHHHhc
Confidence            88999999999999999999999999999854   66777 7788999988887766654

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=1.1e-31  Score=247.67  Aligned_cols=346  Identities=10%  Similarity=0.014  Sum_probs=236.3

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHhhh-hcccchhHHHHHHHHH
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCL-TKFSSDFYILLYGRLF  111 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~l~~~r~l  111 (440)
                      .+.+.+|.+.+|+|+|+++.|++.+.......+.+++.|+++||+|||+++..+......+.+ ....+|++.+++.|++
T Consensus         9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l   88 (368)
T TIGR00903         9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLL   88 (368)
T ss_pred             HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            367889899999999999999855544444444445899999999999887655544444432 3333799999999999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      +|++.+.. +...+.+.      |++|+|+|++++++.+.+..+|..+++++++.+.+.+||  |..|++.+.+.++..+
T Consensus        89 ~G~g~~~~-~~~~~~~~------~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW--r~~f~~~~~l~~~~~~  159 (368)
T TIGR00903        89 AALGQPFL-LNAFAPAA------SQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGL--QLLIIPIAAVAAAGII  159 (368)
T ss_pred             HHhHhHHH-HHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--HHHHHHHHHHHHHHHH
Confidence            99999864 33333344      999999999999999999999999999999999999899  8888887776666666


Q ss_pred             HHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC--CchhhHHHHHH
Q psy10432        192 FIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS--PPLGLVFSCFM  268 (440)
Q Consensus       192 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~g~~~~~~~  268 (440)
                      +.++.+||++++++++.  +.++..++++++++||.+|...+..++.....+.+.+ |.|.+ ++.+  ...+.......
T Consensus       160 ~~~~~lp~~p~~~~~~~--~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~-wlp~~L~~~g~s~~~~~~~~l~~  236 (368)
T TIGR00903       160 LVLAALPALPFQAAEGF--GFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAI-WLEAALRPAGLEDIAGDAVALAI  236 (368)
T ss_pred             HHHHHcCCCCCCCCCCc--chHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCChHHHHHHHHHH
Confidence            66778898765432211  1112234577899999999998888888888887766 55554 4433  22344444444


Q ss_pred             HHHHHHHHHHHHHHhhccCCc---hhHHH-HHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432        269 ISIMIGSKIYSILILKYFKPE---TMLTL-TVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG  344 (440)
Q Consensus       269 ~~~~~~~~~~g~l~~r~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  344 (440)
                      +...++   .+++.|| ..|+   +.... .....++....+ .  . .....      .......+.+++.....+..+
T Consensus       237 ~~g~~g---~~~~~d~-~~r~~~r~~~~~~~~~~~a~~~~~~-~--~-~~~~~------~~~~~~~l~~~~~~~~~~~~~  302 (368)
T TIGR00903       237 LAGLIG---VAVIPDR-VARAGLRSIYIRAAALLIAAFFLAL-A--F-ELNRL------ALFAFIGIAGLLMLPAYAIIM  302 (368)
T ss_pred             HHHHHH---HHHhhHH-hhhhhhHHHHHHHHHHHHHHHHHHH-H--H-ccccH------HHHHHHHHHHHhhhhhHHHHH
Confidence            444444   5677776 5433   22221 222222222111 1  1 11111      122233334444555667778


Q ss_pred             hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      ++.+|..|++.||++.|+.+..+++++..+|...   +....   +....|.+.++..+++.+...
T Consensus       303 ~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~---~~~~~---~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       303 DWIGKFCDKELHGKAAGAIGFTSRAISVALALAA---MLFIS---SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHHHhcchhhcCcccchhhHHHHHHHHHHHHHH---HHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999855   22221   556777777777777666554

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=9.4e-32  Score=253.46  Aligned_cols=361  Identities=13%  Similarity=0.040  Sum_probs=261.1

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ........|.+.+++|.|+.+.+++.++..+...+..++.|+++||+|||+++..+.++.+++ .+.+++++++.+++.|
T Consensus        10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (399)
T TIGR00893        10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR   89 (399)
T ss_pred             HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            344666677788999999999999888888887777889999999999999999999998888 6788889999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      ++.|++.+...+...+++.      |++|+|+|++.+++.+...++|..++|.+++.+.+..+|  ++.|...+...++.
T Consensus        90 ~l~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~  161 (399)
T TIGR00893        90 VLLGAAEAPFFPGIILIVA------SWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSW--QWAFIIEGVLGIIW  161 (399)
T ss_pred             HHHHHHHHhhhhHHHHHHH------HhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHHH
Confidence            9999999999887777777      999999999999999999999999999999999998899  88887777666655


Q ss_pred             HHHHHHhccccCCCCCccCC-----------------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432        190 TLFIYFCWEEHYDPKTAKSS-----------------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV  252 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (440)
                      .+...+..||++++++..++                 ++.++..+..++.+++|+++...+..++.......+....+++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (399)
T TIGR00893       162 GVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTY  241 (399)
T ss_pred             HHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            55555556665432211000                 0001112345677888888887777777666666555544444


Q ss_pred             h-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH-HHHHHHHHHHHH--HHHHhhhccccchhhcchhHH
Q psy10432        253 L-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML-TLTVYLATFSIT--VSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       253 ~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      + +..+   .+.+.......++.+++.++.+++.|| +++|+.. ...........+  .......... ....    ..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~  315 (399)
T TIGR00893       242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAIIAGLVLSLLMFATNYV-NIPY----AA  315 (399)
T ss_pred             HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHHHHHHHHHHHHHHhccc-hhHH----HH
Confidence            4 2223   567888888899999999999999997 8887521 111111111111  1101111101 1111    12


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hhHHHHHHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IHSVFVVCTACLLV  404 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  404 (440)
                      .....+..++.+ ..+....+..|..|+++|+++.|+.+...+++..++|.+.   +.+.+ ..+ ++..+.+.+++.++
T Consensus       316 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~---g~l~~-~~g~~~~~~~~~~~~~~~  390 (399)
T TIGR00893       316 LALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI---GAIAA-TTGSFAGALMVVAALALI  390 (399)
T ss_pred             HHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh---hhhcc-CCCchhHHHHHHHHHHHH
Confidence            222222223333 6788889999999999999999999999999999999954   77777 666 88888888877776


Q ss_pred             HHHHHH
Q psy10432        405 ALLASC  410 (440)
Q Consensus       405 ~~~~~~  410 (440)
                      +.+...
T Consensus       391 ~~~~~~  396 (399)
T TIGR00893       391 GALSYL  396 (399)
T ss_pred             HHHHHH
Confidence            665543

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=100.00  E-value=6.6e-31  Score=246.77  Aligned_cols=336  Identities=14%  Similarity=0.140  Sum_probs=249.9

Q ss_pred             HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432         25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY  103 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~  103 (440)
                      .....+..+..|..|.+.+++|.|+++++++.+.......+.+++.|+++||+|||+.+..+.++..++ .+..++++++
T Consensus        15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~   94 (385)
T TIGR00710        15 ILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE   94 (385)
T ss_pred             HHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence            333445677888888888999999999999777777777777789999999999999999999998888 6788889999


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI  183 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~  183 (440)
                      .+++.|++.|++.+...+..++++.      |++|+++|++++++.+....+|..+||.+++.+.++.+|  +..+....
T Consensus        95 ~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~--~~~~~~~~  166 (385)
T TIGR00710        95 TLLVLRFVQAFGASAGSVISQALVR------DIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW--HAIFAFLS  166 (385)
T ss_pred             HHHHHHHHHHcchhHHHHHHHHHHH------HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--HHHHHHHH
Confidence            9999999999999998887777777      999999999999999999999999999999999998899  88887776


Q ss_pred             HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP  259 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~  259 (440)
                      ...++..+...+..||++++++++   +.++..+.+++.++||+++...+...+.....+.+....+.++ +..+   .+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  243 (385)
T TIGR00710       167 LAGILLSALIFFILPETLPYEARI---QISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV  243 (385)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcccC---CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence            666655555555667765433322   2233345677888999988877666665555555544333333 2333   56


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY  339 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  339 (440)
                      .+.......++.++++++.+++.|| +++|+.+..+.....++...+ ............    .......+.+++.+..
T Consensus       244 ~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~g~~~~~~  317 (385)
T TIGR00710       244 FGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSAVLL-EITAILGLGSWA----MIIGPMMFVGIGNSMI  317 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH-HHHHHhccchHH----HHHHHHHHHHHHHHHH
Confidence            7888888899999999999999997 999988887766666655444 221111111111    2233334455566667


Q ss_pred             hhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        340 CPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       340 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      .+.......|..| ++++++.++.+.....++.+.+..+
T Consensus       318 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~  355 (385)
T TIGR00710       318 SSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV  355 (385)
T ss_pred             HHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence            7777777777766 6789999999988876655555534

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=3.3e-31  Score=249.57  Aligned_cols=349  Identities=13%  Similarity=0.098  Sum_probs=246.1

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ....+...|.+.+|+|.|+++++++.++.+....+.+++.|+++||+|||+++..+.++.+++ .++++++|++.+++.|
T Consensus        24 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r  103 (412)
T TIGR02332        24 RINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLR  103 (412)
T ss_pred             hhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            444566777788999999999999777766666666679999999999999999999999998 6788899999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------hcccCchhhHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD------ILNLGPIAPFAVAI  183 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~gw~~~~~~~~~~  183 (440)
                      +++|++.+...|...+++.      |++|+++|++++++.+.+.++|..+++.+++++.+      ..||  |+.|.+.+
T Consensus       104 ~l~G~~~~~~~~~~~~~~~------~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gw--r~~f~~~~  175 (412)
T TIGR02332       104 ILVGIAEAGFLPGILLYLT------FWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGW--QWLFLLEG  175 (412)
T ss_pred             HHHHHHHhhHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccch--hHHHHHHH
Confidence            9999999998776666666      99999999999999999999999999999998875      3578  88888877


Q ss_pred             HHHHHHHHHHHHhccccCCCCC-----ccC--------C------CC---cc---chhhhhhhhccCcchHHHHHHHHHH
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKT-----AKS--------S------LL---PN---SMFSSLKFLFTNPCLLTLGIVQSIY  238 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~-----~~~--------~------~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~  238 (440)
                      ...++..++.++++||++++.+     +++        +      .+   .+   ...+.++.++ +|.++...+...+.
T Consensus       176 ~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  254 (412)
T TIGR02332       176 FPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCL  254 (412)
T ss_pred             HHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHH
Confidence            7766556666667788764321     000        0      00   00   0012234444 47777777666666


Q ss_pred             HhHHHHHHHhhhhhhhcc--C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH-HHHHHHHHHHHHHHHHhhhc
Q psy10432        239 EGIMYTFIFVWTPVLEVL--S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML-TLTVYLATFSITVSTVLTSS  312 (440)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~--~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  312 (440)
                      ....+.+....+++++..  +   .+.+.......++.+++.++.|++.|| +++|+.. ........++. .+ ... .
T Consensus       255 ~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~~~~-~~-~~~-~  330 (412)
T TIGR02332       255 TNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAAAGW-LL-ASA-T  330 (412)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHHHHH-HH-HHh-c
Confidence            666666656555555442  2   456778888999999999999999997 9877643 33333333222 11 111 1


Q ss_pred             cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhh
Q psy10432        313 LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIH  392 (440)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  392 (440)
                      .. ..      .....+.+..++.....+.......+..|+++|+++.|+.+...++|..++|.+.   +.+.|...+|+
T Consensus       331 ~~-~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~---g~i~~~~g~~~  400 (412)
T TIGR02332       331 DH-NL------IQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLI---GILKDATGSFN  400 (412)
T ss_pred             CC-HH------HHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhc---ccccccCCCCc
Confidence            11 11      1111122221222222334445556778999999999999999999999999955   67777333588


Q ss_pred             HHHHHHHHHH
Q psy10432        393 SVFVVCTACL  402 (440)
Q Consensus       393 ~~~~~~~~~~  402 (440)
                      ..+.+++++.
T Consensus       401 ~~~~~~~~~~  410 (412)
T TIGR02332       401 SGLWFVAALL  410 (412)
T ss_pred             hhHHHHHHHH
Confidence            8887766543

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00897 2A0118 polyol permease family

Probab=100.00  E-value=6.2e-31  Score=247.50  Aligned_cols=373  Identities=13%  Similarity=0.155  Sum_probs=252.5

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh-
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT-   96 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~-   96 (440)
                      ...+..+....+++...++++++.+|+|.|+++.+++.+.......+.+|+.|+++||+||||++..+..+.+++ .++ 
T Consensus        17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~   96 (402)
T TIGR00897        17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFI   96 (402)
T ss_pred             HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence            334444555556666777887888999999999999777777777777789999999999999999999888887 433 


Q ss_pred             --cc-cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcc
Q psy10432         97 --KF-SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA-IVSGFTAHFFADILN  172 (440)
Q Consensus        97 --~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~g  172 (440)
                        .. .++++.+++.|+++|++.+...+...+.+.      +++|+|+|++++|+.+...++|. +++|.+++.+.+.+|
T Consensus        97 ~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g  170 (402)
T TIGR00897        97 VFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVV------YNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG  170 (402)
T ss_pred             HHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence              23 357888899999999998887666566666      99999999999999999999996 689999999988888


Q ss_pred             cCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432        173 LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV  252 (440)
Q Consensus       173 w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (440)
                      |  +..++.......+..++..+..+|.+++++++++.+.++..+.++.+++||+++...+..++.....+.... +.|.
T Consensus       171 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~  247 (402)
T TIGR00897       171 E--MNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAV-FLPM  247 (402)
T ss_pred             h--HHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence            6  433333322222223333334444322221111112233345567788999998877666665565555544 4454


Q ss_pred             h-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH-HHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        253 L-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT-LTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       253 ~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      + +..+   .+.+.......++.+++++..|++.|| +++|+... .+.....+....+............     ....
T Consensus       248 ~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~-----~~~~  321 (402)
T TIGR00897       248 FVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFA-----VALI  321 (402)
T ss_pred             HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHH-----HHHH
Confidence            4 4444   556677778889999999999999998 98887653 2222333322222111111111111     1223


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+.+++.+...+. .....+. ++++||++.|+.+...+++..++|.+.   +.+.+ ..++...+.+.+++.+++.+
T Consensus       322 ~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~---g~l~~-~~g~~~~~~~~a~~~~i~~~  395 (402)
T TIGR00897       322 IAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIA---VLFIG-FFGAIGVVWIFAALYVVSAF  395 (402)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHH---HHHHh-hcchHHHHHHHHHHHHHHHH
Confidence            333344444444443 3455565 456899999999999999999999954   77777 77888999988888777766


Q ss_pred             HHHHh
Q psy10432        408 ASCVF  412 (440)
Q Consensus       408 ~~~~~  412 (440)
                      ...+.
T Consensus       396 ~~~~~  400 (402)
T TIGR00897       396 LTAFI  400 (402)
T ss_pred             HHHHh
Confidence            65544

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=3.9e-31  Score=247.27  Aligned_cols=361  Identities=10%  Similarity=0.106  Sum_probs=255.0

Q ss_pred             HHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccch
Q psy10432         23 PFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSD  101 (440)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~  101 (440)
                      ..+.....+....+.+|.+.+|+|.|.++.++..+.......+.+|+.|+++||+|||+++..+..+.+++ .++++++|
T Consensus        11 ~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~   90 (382)
T PRK10091         11 GTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSS   90 (382)
T ss_pred             HHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence            33444445667888998999999999999998777777777777789999999999999999999999998 78889999


Q ss_pred             hHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHH
Q psy10432        102 FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV  181 (440)
Q Consensus       102 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~  181 (440)
                      ++.+++.|+++|++.+...+...+.+.      |+.|+++|+++++....+..+|..+||++++.+.+..||  |+.|.+
T Consensus        91 ~~~l~~~r~l~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw--r~~f~~  162 (382)
T PRK10091         91 YLMLAIGRLVSGFPHGAFFGVGAIVLS------KIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW--RYTFLL  162 (382)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHH------HhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH--HHHHHH
Confidence            999999999999999987665555555      999999999999999999999999999999999998899  888888


Q ss_pred             HHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh-ccC---
Q psy10432        182 AIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE-VLS---  257 (440)
Q Consensus       182 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  257 (440)
                      .+....+..+..++.+||.++++++       +.++.+ +.+++++.+.......+.+...+....+.+|++. ..+   
T Consensus       163 ~~~~~~~~~~~~~~~lp~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~  234 (382)
T PRK10091        163 IAVFNIAVLASIYFWVPDIRDEAKG-------GLREQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSE  234 (382)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccccc-------CHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            7776665555555667775432111       112233 3456677766555444444444443344556663 333   


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh-
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV-  336 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  336 (440)
                      .+.++......++.++++++.+++.|| +++++.+..+..+..++.+.+.....  . .+      .......+...+. 
T Consensus       235 ~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~~~~~~~~--~-~~------~~~~~~~~~~~g~~  304 (382)
T PRK10091        235 TSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALLMLFFFGG--M-KT------ASLIFAFICCAGLF  304 (382)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHHHHHHHHh--h-HH------HHHHHHHHHHHHHH
Confidence            567888899999999999999999997 99998888777666665543311111  1 11      1122222222222 


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +...+......++..|++.++...  .+...++|..++|.+.   |.+.|...+|+..+...++..++.........+
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~---G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (382)
T PRK10091        305 ALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCG---GMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR  377 (382)
T ss_pred             hhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHh---HHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence            223333334555555556666553  3667889999999944   777774568889999887776666555444433

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=9.1e-31  Score=249.98  Aligned_cols=358  Identities=10%  Similarity=0.030  Sum_probs=239.1

Q ss_pred             hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chhHHHHHHH
Q psy10432         35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDFYILLYGR  109 (440)
Q Consensus        35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~~~l~~~r  109 (440)
                      ....|.+.++ |.|+++.++..+...+...+.+++.|+++||+|||++++.+.++.+++ +.+++.    ++++.+++.|
T Consensus        49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  127 (452)
T PRK11273         49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL  127 (452)
T ss_pred             HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH
Confidence            4556666677 999999999888888887888889999999999999999999888887 555543    4788889999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA-IVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      ++.|++.+...|...+.+.      |++|+++|++++++.+.+.++|. +.+|+++..+....+|  |..|++.+.+.++
T Consensus       128 ~l~gi~~g~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw--~~~f~i~~~~~~~  199 (452)
T PRK11273        128 FLCGWFQGMGWPPCGRTMV------HWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW--HAALYMPAFAAIL  199 (452)
T ss_pred             HHHHHHHhccchHHHHHHH------HhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH--HHHHHHHHHHHHH
Confidence            9999999988776666666      99999999999999999999986 4566654444444588  8888877766665


Q ss_pred             HHHHHHHhccccCCCCC----c--cC--------C-CCccchhhhh-hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432        189 STLFIYFCWEEHYDPKT----A--KS--------S-LLPNSMFSSL-KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV  252 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~----~--~~--------~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (440)
                      ..++..+.+||++++..    +  ++        + .+..+.++.+ +.++|||.+|...+..++.+...+......|++
T Consensus       200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~  279 (452)
T PRK11273        200 VALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTY  279 (452)
T ss_pred             HHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555666677654210    0  00        0 0001112222 346788999888777777776666655544444


Q ss_pred             hh-ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccC--CchhHHH-HHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        253 LE-VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFK--PETMLTL-TVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       253 ~~-~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      ++ ..+   .+.+.......++.+++.++.|++.|| ++  ++..... ...+..++.+.+ ... ... ....     .
T Consensus       280 l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~-~~~-~~~-~~~~-----~  350 (452)
T PRK11273        280 LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVY-WLN-PAG-NPTV-----D  350 (452)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHH-HHh-ccc-ChHH-----H
Confidence            53 233   566777778888999999999999997 74  3332221 112222222111 111 111 1111     1


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHH-HHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCF-TLIFIKNEDAEGGKLIAIHSVFVVCTACLLV  404 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (440)
                      .......+.......+.......|..|++.+|++.|+.+...++++.+ +|.+.   +...| ..+++..|.++++.+++
T Consensus       351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~---g~l~~-~~g~~~~f~~~~~~~~~  426 (452)
T PRK11273        351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV---GYTVD-FFGWDGGFMVMIGGSIL  426 (452)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH---HHHHH-HhcchHHHHHHHHHHHH
Confidence            122222222111112233345678889999999999999998888765 67744   67777 77899999988888887


Q ss_pred             HHHHHHHhhh
Q psy10432        405 ALLASCVFKR  414 (440)
Q Consensus       405 ~~~~~~~~~~  414 (440)
                      +.+......+
T Consensus       427 ~~~~~~~~~~  436 (452)
T PRK11273        427 AVILLIVVMI  436 (452)
T ss_pred             HHHHHHHHhc
Confidence            7776665554

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=100.00  E-value=2.1e-30  Score=244.05  Aligned_cols=353  Identities=13%  Similarity=0.088  Sum_probs=241.4

Q ss_pred             HHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHH
Q psy10432         29 FSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLY  107 (440)
Q Consensus        29 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~  107 (440)
                      ....+..|.+|.+.+++|.+.++.++..++.++...+.+++.|+++||+|||++++.+..+.+++ .++.+++|++.+++
T Consensus        30 ~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~  109 (413)
T PRK15403         30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLI  109 (413)
T ss_pred             HHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            34667888898889999999999988666555555555669999999999999999999999988 78888999999999


Q ss_pred             HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      +|+++|++.+...+...+.+.      |++|+++|++++++......+|..+||.+++.+.++.||  |+.|++..+..+
T Consensus       110 ~r~l~Gi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw--~~~f~~~~~~~~  181 (413)
T PRK15403        110 ARFIQGTSICFIATVGYVTVQ------EAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW--KVLFAIIAVMGL  181 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHH
Confidence            999999998876444334444      999999999999999999999999999999999998899  888888777766


Q ss_pred             HHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhH
Q psy10432        188 GSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLV  263 (440)
Q Consensus       188 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~  263 (440)
                      +..+..++.+||++++++++  ...++..++++.+++||.++...+...+.....+.+....|.++ +..+   .+.++.
T Consensus       182 i~~~~~~~~lp~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~  259 (413)
T PRK15403        182 IAFVGLLLAMPETVKRGAVP--FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWT  259 (413)
T ss_pred             HHHHHHHHhCCCCccccCCC--CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHH
Confidence            65555555678865432221  12233456778889999999877777776666665544333344 3333   567777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhh-hccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432        264 FSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLT-SSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV  342 (440)
Q Consensus       264 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  342 (440)
                      ......+.++++.+.+++.+| ..+++..........++...+.... ..++ .+.     .......+++++.+...|.
T Consensus       260 ~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~-~~~-----~~~~~~~l~~~G~~~~~p~  332 (413)
T PRK15403        260 QVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLVGLALLIVGNLLWPH-VWL-----WSVLGTSLYAFGIGLIFPT  332 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHccc-cHH-----HHHHHHHHHHHHHHHHhHH
Confidence            777778888888888887764 4444443332222222222221110 1111 111     1344555566677777776


Q ss_pred             HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432        343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLV  404 (440)
Q Consensus       343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (440)
                      ........ .+..+|++.++.+.....+...++...   +...+ . +....|...+++..+
T Consensus       333 ~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~---g~~~~-~-~~~~~~~~~~~~~~~  388 (413)
T PRK15403        333 LFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIG---RWLWF-N-GGRLPFHLLAVVAGV  388 (413)
T ss_pred             HHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHH---HHHHH-c-CCchHHHHHHHHHHH
Confidence            66433221 223468888888888877777777632   44433 2 335555555544443

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=2.6e-31  Score=247.61  Aligned_cols=344  Identities=17%  Similarity=0.188  Sum_probs=257.8

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS  100 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~  100 (440)
                      ...+....+..+..+.+|...++++.++.+++++.++......+.+|+.|+++||+||||+++.+..+..++ .+..+.+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~   85 (365)
T TIGR00900         6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVA   85 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence            444555666777778887777889999999999888888888888899999999999999999998888776 5555555


Q ss_pred             -----hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q psy10432        101 -----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGP  175 (440)
Q Consensus       101 -----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~  175 (440)
                           +++.+++.|++.|++.+...+...+++.      |+.|+++|++.+++.+...++|.++||.+++.+.+..||  
T Consensus        86 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~--  157 (365)
T TIGR00900        86 LLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP------DLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI--  157 (365)
T ss_pred             HcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH--
Confidence                 9999999999999999999887777777      999999999999999999999999999999999999899  


Q ss_pred             hhhHHHHHHHHHHHHHHHHHh-ccccCCCCCccCC-CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432        176 IAPFAVAIPFLLGSTLFIYFC-WEEHYDPKTAKSS-LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL  253 (440)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (440)
                      +..++......++..+..... .||++++++++.+ +..++..+.++.+++||.++...+...+...........+.|.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (365)
T TIGR00900       158 KWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYV  237 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            877777665554443333322 2333221111111 11233455677788999988877766666655554442345555


Q ss_pred             -hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432        254 -EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       254 -~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                       ++ .+   .+.+.......++.+++.++.+++.|| .++++.+..+.....+....+ .+...  . . .    .....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~-~----~~~~~  307 (365)
T TIGR00900       238 QSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGLAILVV-GLTPP--N-F-P----LFLVL  307 (365)
T ss_pred             HHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHH-Hhhch--h-H-H----HHHHH
Confidence             22 23   667888888999999999999999997 988888777665555544333 21111  1 1 1    34445


Q ss_pred             HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432        329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  386 (440)
                      ..+.+++.+...+...++..|..|+++|+++.|+.+...+++..++|.+.   |.+.|
T Consensus       308 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~---g~l~~  362 (365)
T TIGR00900       308 WFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA---GPLAD  362 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence            55666777888888899999999999999999999999999999999844   44444

>PRK10504 putative transporter; Provisional

Probab=100.00  E-value=7.6e-31  Score=252.60  Aligned_cols=331  Identities=12%  Similarity=0.073  Sum_probs=243.0

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      ..+...+..|.+.+++|.++.+.+++.+...+...+..+++|+++||+|||++++.+..+.+++ .++.++++++.+++.
T Consensus        25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  104 (471)
T PRK10504         25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLA  104 (471)
T ss_pred             hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            3556778888888999999999988766666655666689999999999999999998888887 677788999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      |+++|++.+...|...+.+.      |.+|+++|+++.+......++|..+||.+++.+.++.||  |+.|.+......+
T Consensus       105 ~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw--~~~f~~~~~~~~l  176 (471)
T PRK10504        105 RVLQGVGGAMMVPVGRLTVM------KIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW--HWIFLINIPVGII  176 (471)
T ss_pred             HHHHHhhhHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH--HHHHHHHHHHHHH
Confidence            99999999998887666677      999999999999999999999999999999999999899  8888877766655


Q ss_pred             HHHHHHHhccccCCCCCccC-------------------CCCc-----------------------------cchhhhhh
Q psy10432        189 STLFIYFCWEEHYDPKTAKS-------------------SLLP-----------------------------NSMFSSLK  220 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~~~~-------------------~~~~-----------------------------~~~~~~~~  220 (440)
                      ..+......|+.+.++++.+                   +.+.                             ++...+ .
T Consensus       177 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  255 (471)
T PRK10504        177 GAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-L  255 (471)
T ss_pred             HHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-H
Confidence            55555555555432211100                   0000                             000001 2


Q ss_pred             hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q psy10432        221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLT  295 (440)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~  295 (440)
                      +++|||.++......++........ ..+.|++ +. .+   ...++......++.+++.++.+++.|| +++|+.+..+
T Consensus       256 ~l~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~  333 (471)
T PRK10504        256 KLFRTRTFSLGLAGSFAGRIGSGML-PFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVAT  333 (471)
T ss_pred             HHhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHH
Confidence            4678888887766666655554333 3345554 32 22   567778888888888888999999998 9999998877


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432        296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~  375 (440)
                      ..+..+....+ .......  +..    .......+.+++.+...+..+....+.+|++.+++++|+.++..++|..+++
T Consensus       334 ~~~~~~~~~~~-~~~~~~~--~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~  406 (471)
T PRK10504        334 TLGLALVSLLF-MLVALLG--WYY----LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGV  406 (471)
T ss_pred             HHHHHHHHHHH-Hhccccc--cHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHH
Confidence            77666655444 2211111  111    1222333444566777777888888889999999999999999999999998


Q ss_pred             HHh
Q psy10432        376 IFI  378 (440)
Q Consensus       376 ~~~  378 (440)
                      .+.
T Consensus       407 ~i~  409 (471)
T PRK10504        407 TIA  409 (471)
T ss_pred             HHH
Confidence            743

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=100.00  E-value=7.9e-31  Score=245.47  Aligned_cols=366  Identities=14%  Similarity=0.060  Sum_probs=255.5

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK   97 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~   97 (440)
                      ..+...++..+++++.....+++.+|+|.++.+.+++.....+...+..|+.|+++||+||||+++.+..+.+++ +++.
T Consensus         7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~   86 (393)
T PRK11195          7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML   86 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence            445556666666766666666777899999999999877777777888889999999999999999999999887 5555


Q ss_pred             ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q psy10432         98 FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIA  177 (440)
Q Consensus        98 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~  177 (440)
                      ++++.   ++.|+++|++.+...|+..+++.      |++|+|+|++++++.+...++|.++||.++|++.++. |  +.
T Consensus        87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~------~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~--~~  154 (393)
T PRK11195         87 FGIHP---LLAYGLVGIGAAAYSPAKYGILT------ELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-A--EA  154 (393)
T ss_pred             HHHHH---HHHHHHHHHHHHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--HH
Confidence            55553   78899999999999998888888      9999999999999999999999999999999999863 5  66


Q ss_pred             hHHHHHHHHHHHHHHHHHhccccCCCCCccCCCC---ccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432        178 PFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLL---PNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-  253 (440)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (440)
                      .+.+.....++. .+..+.+||+++++++++.+.   .++.++.++.++++|.+........+.+..........++.. 
T Consensus       155 ~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (393)
T PRK11195        155 ALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAP  233 (393)
T ss_pred             HHHHHHHHHHHH-HHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666655444333 334456777654322211111   123344566788888877654444333333332222222222 


Q ss_pred             ---hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHH
Q psy10432        254 ---EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFL  330 (440)
Q Consensus       254 ---~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (440)
                         +....+.|......+++.+++++..+++.|| .++++.+..+... .+....+ ..   .+..+      .......
T Consensus       234 ~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~~-~~~~~~~-~~---~~~~~------~~~~~~~  301 (393)
T PRK11195        234 VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGILM-GLVVLLM-AL---QHSLL------PAYPLLI  301 (393)
T ss_pred             HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHHH-HHHHHHH-HH---HhHHH------HHHHHHH
Confidence               3334778999999999999999999999997 8877766665432 2222111 11   11111      2333444


Q ss_pred             HHHHhhhchhhhHHhHhccCCcchh-hHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432        331 IYEISVGMYCPVTGYLRGRIIPEKA-RATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS  409 (440)
Q Consensus       331 ~~~~~~g~~~~~~~~~~~~~~p~~~-~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (440)
                      +.+++.+...+..++..++..|++. +|++.++.+...+++..++..+.   +.. + ..+.+..+.+.+...+++..+.
T Consensus       302 ~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~---~~~-~-~~~~~~~~~~~~~~~~~~~~~~  376 (393)
T PRK11195        302 LIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY---SLL-V-KLGVPVVAVIVGFGLLVALAMA  376 (393)
T ss_pred             HHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH---HHH-H-HcCCCHHHHHHHHHHHHHHHHH
Confidence            5566677777777788888766654 79999999999999999998854   322 3 5566777777666666666655


Q ss_pred             HHhhh
Q psy10432        410 CVFKR  414 (440)
Q Consensus       410 ~~~~~  414 (440)
                      ...+.
T Consensus       377 ~~~~~  381 (393)
T PRK11195        377 LLWRW  381 (393)
T ss_pred             HHHHH
Confidence            55544

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=9e-31  Score=249.04  Aligned_cols=340  Identities=16%  Similarity=0.123  Sum_probs=235.1

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      .....+..|.+.+++|.|+.+.++..++..+...+.+++.|+++||+|||+++..+.++.+++ .+.+++++++.++++|
T Consensus        34 ~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r  113 (426)
T PRK12307         34 FMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSR  113 (426)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            334566677777999999999998777777777777789999999999999999999999998 6888899999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      +++|++.+...+...+++.      |++|+|+|+++.++...+.++|.++++.+.+.+.+..+|  |..+++.....++ 
T Consensus       114 ~l~G~g~g~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w--~~~f~i~~~~~~~-  184 (426)
T PRK12307        114 FIVGMGMAGEYACASTYAV------ESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW--RAAFFVGLLPVLL-  184 (426)
T ss_pred             HHHHHHHhhHHHHHHHHHH------HhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH--HHHHHHHHHHHHH-
Confidence            9999999988777777777      999999999999999999999999999999999888899  8787765443332 


Q ss_pred             HHHHHHhccccCCCCCcc----CC---CCccchhhhhhhhccCcchHHHHHHHH---HHHhHHHHHHHhhhhhhhccC--
Q psy10432        190 TLFIYFCWEEHYDPKTAK----SS---LLPNSMFSSLKFLFTNPCLLTLGIVQS---IYEGIMYTFIFVWTPVLEVLS--  257 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--  257 (440)
                      .+......||+++.++++    ++   ...+.....+++++++|.++.......   ......+......+++++..+  
T Consensus       185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  264 (426)
T PRK12307        185 VIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFD  264 (426)
T ss_pred             HHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            222222345543211100    00   000111225667788887765333222   122222223233343443333  


Q ss_pred             -CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHh-
Q psy10432        258 -PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEIS-  335 (440)
Q Consensus       258 -~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  335 (440)
                       ...+...+...++.++++++.+++.|| +++|+.+..+.....+..+.+...   .....       ......+++.. 
T Consensus       265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~  333 (426)
T PRK12307        265 TGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRI---PQDNY-------LLLGACLFGLMA  333 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHH---ccccH-------HHHHHHHHHHHH
Confidence             456777788889999999999999997 999988877776655544333111   11111       11111111111 


Q ss_pred             -hhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHH
Q psy10432        336 -VGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSV  394 (440)
Q Consensus       336 -~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  394 (440)
                       .....+.....+.|.+|++.||++.|+.+...++++.++|.+.   +.+.+ ..++...
T Consensus       334 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~---g~l~~-~~g~~~~  389 (426)
T PRK12307        334 TNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA---TWLGI-TMGLGAA  389 (426)
T ss_pred             hcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH---HHHHH-cccHHHH
Confidence             1122345566778999999999999999999999999999954   66767 6665543

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=100.00  E-value=1.2e-30  Score=244.81  Aligned_cols=358  Identities=11%  Similarity=0.092  Sum_probs=251.5

Q ss_pred             HHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432         23 PFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS  100 (440)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~  100 (440)
                      ..++...+.....|+++..+ +++|.|+.++|++.........+.+++.|+++||+|||+++..+..+..++ ..+.+.+
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~   97 (400)
T PRK11646         18 DNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH   97 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc
Confidence            33444445556677776544 789999999999999888888888899999999999999999999999998 6777889


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA  180 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~  180 (440)
                      +++.+++.|+++|++.+...|...+++.      |++|+|+|++++++.+...++|..+||.+++.+. ..||  +..|+
T Consensus        98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~--~~~f~  168 (400)
T PRK11646         98 EPWLLWLSCILSGLGGTLFDPPRTALVI------KLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDF--RLVCA  168 (400)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhH--HHHHH
Confidence            9999999999999999988787777777      9999999999999999999999999999999998 5588  88888


Q ss_pred             HHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hcc---
Q psy10432        181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVL---  256 (440)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  256 (440)
                      +.+...++..++..+..||.++++      ..++..++++++++||+++...+............ ..+.|.+ ++.   
T Consensus       169 ~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~  241 (400)
T PRK11646        169 TGAVLFVLAAAFNAWLLPAYKLST------VRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQV-MLMLPIMVNDIAGS  241 (400)
T ss_pred             HHHHHHHHHHHHHHHhCCcccccc------cchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHH-HHhhhhhHHhhcCC
Confidence            777665555544445556532211      11223456777888888876554443333222222 2244554 322   


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      ..+.+..++...++...+....+++.||+.+.++.+..+.....++...+ ...  ++ .+      .......+...+.
T Consensus       242 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l-~~~--~~-~~------~~~~~~~l~~~g~  311 (400)
T PRK11646        242 PSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI-GMV--SN-LQ------QLFTLICLFYIGS  311 (400)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HHh--hh-HH------HHHHHHHHHHHHH
Confidence            25667777777776666666667766643555665666555555544333 211  11 11      1222333445556


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc--ch-hhHHHHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL--IA-IHSVFVVCTACLLVALLAS  409 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~  409 (440)
                      +...|...++..+..|+++||+++|+.+...++|..++|.+.   |.+.|..  .+ ....+...+.+.+++.+..
T Consensus       312 ~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~---G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (400)
T PRK11646        312 IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGG---GWLFDLGKALNQPELPWMMLGIIGLITLLAL  384 (400)
T ss_pred             HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccch---HHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence            677788889999999999999999999999999999999843   6666521  12 3456665555555554443

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=9.2e-31  Score=252.39  Aligned_cols=333  Identities=11%  Similarity=0.038  Sum_probs=249.0

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      ..++....+|++.+|+|.+.++.+|+.+...+......++.|+++||+|||++++.+..+..++ .++++++|++.++++
T Consensus        21 d~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~  100 (495)
T PRK14995         21 DATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIAT  100 (495)
T ss_pred             HHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence            4677888899999999999999998665555554555579999999999999999999999998 789999999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      |+++|++.+...|...+.+.      +.+ |+++|++++++......+|..+||.+++++.+++||  |+.|++...+.+
T Consensus       101 r~l~G~g~~~~~~~~~~~l~------~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw--r~~f~i~~~~~~  172 (495)
T PRK14995        101 RALLAIGAAMIVPATLAGIR------ATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW--GSVFLINVPIVL  172 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHHHHHHH
Confidence            99999999998776555555      655 778999999999999999999999999999999999  888888877777


Q ss_pred             HHHHHHHHhccccCCCCCccCCCCc-------------------cch---------------------------hhh--h
Q psy10432        188 GSTLFIYFCWEEHYDPKTAKSSLLP-------------------NSM---------------------------FSS--L  219 (440)
Q Consensus       188 ~~~~~~~~~~~e~~~~~~~~~~~~~-------------------~~~---------------------------~~~--~  219 (440)
                      +..++..+.+||++++++++.+...                   +..                           +++  .
T Consensus       173 ~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~  252 (495)
T PRK14995        173 VVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID  252 (495)
T ss_pred             HHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC
Confidence            6666666677776543222111000                   000                           000  0


Q ss_pred             hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh----ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q psy10432        220 KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE----VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLT  295 (440)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~  295 (440)
                      .+++|||.+....+..++.....+......+.+++    ....+.|+......++..+++++.|++.|| +++|+.+..+
T Consensus       253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g  331 (495)
T PRK14995        253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGG  331 (495)
T ss_pred             HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHH
Confidence            24677787777666665555555544443343432    223788999999999999999999999998 9998887777


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432        296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~  375 (440)
                      ..+..++...+ .........+      .......+.+++.|...+.......+.+|+++++.+.++.++..++|..+|+
T Consensus       332 ~~~~~~~~~~l-~~~~~~~~~~------~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~  404 (495)
T PRK14995        332 MALSALSFYGL-AMTDFSTQQW------QAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGI  404 (495)
T ss_pred             HHHHHHHHHHH-HHhcCCCchH------HHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHH
Confidence            77666655444 2221111112      2233445666677877777778888888999999999999999999999888


Q ss_pred             HHh
Q psy10432        376 IFI  378 (440)
Q Consensus       376 ~~~  378 (440)
                      .+.
T Consensus       405 ai~  407 (495)
T PRK14995        405 AIF  407 (495)
T ss_pred             HHH
Confidence            643

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=100.00  E-value=1.4e-31  Score=248.11  Aligned_cols=337  Identities=23%  Similarity=0.318  Sum_probs=250.7

Q ss_pred             HHHHHHHHHHHhhhhhHh-hhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc
Q psy10432         22 IPFFLATFSDWIQGPYVY-KVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS   99 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~   99 (440)
                      +..+..........+..+ .+.+++|.|+++++++.++......+.+++.|+++||+|||+++..+.++.+++ .+..++
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~   82 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA   82 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence            344555666777888887 677999999999999888888888888899999999999999999999999998 555566


Q ss_pred             chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhH
Q psy10432        100 SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPF  179 (440)
Q Consensus       100 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~  179 (440)
                      +|.+.+++.|++.|++.+...+...+++.      |++|+|+|++++++.+...++|.++||.+++.+.+..+|  +..+
T Consensus        83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~--~~~~  154 (352)
T PF07690_consen   83 SNFWLLLIARFLLGIGSGFFSPASNALIA------DWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGW--RWAF  154 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH--CCHH
T ss_pred             hhHHHHhhhcccccccccccccccccccc------ccchhhhhhhccccccchhhhhhhcccchhhhhhhcccc--cccc
Confidence            88889999999999999999888777777      999999999999999999999999999999999988899  8788


Q ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCccCCCC-----ccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432        180 AVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLL-----PNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-  253 (440)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (440)
                      ++.+...++..++.....++++++++++++.+     +++..+.++.++++|.+|................. .+.|.+ 
T Consensus       155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l  233 (352)
T PF07690_consen  155 LISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS-FFLPLYL  233 (352)
T ss_dssp             HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHC
T ss_pred             ccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhh-cccchhh
Confidence            88887777666544445555444333222111     11222236777888877633333333333333333 344443 


Q ss_pred             ----hcc-CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432        254 ----EVL-SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       254 ----~~~-~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                          +.. ..+.+.......+..++++++.+++.|| +++++..........+....+.......+ ..      .....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~  305 (352)
T PF07690_consen  234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALGLLLLPFSSS-PV------WLIIA  305 (352)
T ss_dssp             CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCCSHHHCH-HH------HHHHH
T ss_pred             hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHHHhhh-HH------HHHHH
Confidence                222 1456677888888999999999999997 99888877777766666655522211111 11      23445


Q ss_pred             HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432        329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~  375 (440)
                      ..+.+++.+...+......++..|++++|++.|+.+...+++..++|
T Consensus       306 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  306 LFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            55667778888999999999999999999999999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=2.9e-30  Score=245.18  Aligned_cols=358  Identities=16%  Similarity=0.111  Sum_probs=230.8

Q ss_pred             HhhhhhHhhhHhhcC---CChhh---HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH-
Q psy10432         32 WIQGPYVYKVYKDYG---YDEKN---IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY-  103 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g---~s~~~---~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~-  103 (440)
                      .......|.+.++++   .+..+   ++..+..++....+.++++|+++||+||||++..+..+++++ .++++++++. 
T Consensus        39 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~  118 (432)
T PRK10406         39 YVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYET  118 (432)
T ss_pred             HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchh
Confidence            334445555667774   44443   344677777766666779999999999999999999999998 7888888764 


Q ss_pred             -------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q psy10432        104 -------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-------  169 (440)
Q Consensus       104 -------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------  169 (440)
                             .+++.|+++|++.|...|...+++.      |++|+++|++..+..+.+...|.++++.+...+..       
T Consensus       119 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~------e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  192 (432)
T PRK10406        119 IGTWAPALLLLARLFQGLSVGGEYGTSATYMS------EVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAEL  192 (432)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHH------HhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence                   5889999999999999888777777      99999999999999998888888888877665542       


Q ss_pred             -hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHH-HhHHHHHHH
Q psy10432        170 -ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIY-EGIMYTFIF  247 (440)
Q Consensus       170 -~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  247 (440)
                       .+||  |.+|++.++..++. +.....+||+++.+++++  +   ...++++++++++.+...+...+. ....+.+..
T Consensus       193 ~~~gW--r~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~~--~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (432)
T PRK10406        193 REWGW--RIPFALGAVLAVVA-LWLRRQLDETSQQETRAL--K---EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTT  264 (432)
T ss_pred             hccch--HHHHHHHHHHHHHH-HHHHhcCCCCchHHHhhh--c---ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4577  99998877665543 333445666654322111  1   122466777888877655544433 444555544


Q ss_pred             hhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432        248 VWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN  323 (440)
Q Consensus       248 ~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (440)
                      ..++++ +..+   .+.+...+...+...++.++.|++.|| +++|+.+.....+..+................      
T Consensus       265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  337 (432)
T PRK10406        265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSALQNVSSPY------  337 (432)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHcCCcHH------
Confidence            334444 3334   355677777777788888999999998 99988776655443333222211111111111      


Q ss_pred             HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhH-HHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432        324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFI-TCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL  402 (440)
Q Consensus       324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (440)
                      ..+....+..+..+...+....+.+|.+|++.|+++.|+.+...+.. +...|.+.   +.+.. ...+...+...++..
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~---~~l~~-~g~~~~~~~~~~~~~  413 (432)
T PRK10406        338 AAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVA---LSLKS-IGMETAFFWYVTLMA  413 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHH---HHHHH-hCCCcHHHHHHHHHH
Confidence            11111112222334444556778899999999999999998876652 44455522   32222 223455566666666


Q ss_pred             HHHHHHHHHhhh
Q psy10432        403 LVALLASCVFKR  414 (440)
Q Consensus       403 ~~~~~~~~~~~~  414 (440)
                      +++.+..+..++
T Consensus       414 ~i~~~~~~~l~~  425 (432)
T PRK10406        414 VVAFLVSLMLHR  425 (432)
T ss_pred             HHHHHHHHHhhh
Confidence            666555554433

>PRK03633 putative MFS family transporter protein; Provisional

Probab=100.00  E-value=4.6e-30  Score=240.09  Aligned_cols=348  Identities=10%  Similarity=0.038  Sum_probs=245.1

Q ss_pred             HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432         25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY  103 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~  103 (440)
                      ++...+.....+++|.+.+++|.|++++|++.+...+...+.+++.|+++||+|||+.+..+.++.+++ ..+++++|++
T Consensus        16 ~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~   95 (381)
T PRK03633         16 LLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFW   95 (381)
T ss_pred             HHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence            344445667889998888999999999999888888777777789999999999999999999999988 6778899999


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI  183 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~  183 (440)
                      .+++.|+++|++.+...|...+.+.      +..++++|+++++..+.+.++|..+||.+++.+.+...|  ...+....
T Consensus        96 ~l~~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~--~~~~~~~~  167 (381)
T PRK03633         96 SWLAWRFVAGIGCAMIWVVVESALM------CSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMS--VLPWVTGL  167 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc--hHHHHHHH
Confidence            9999999999999988776666666      888999999999999999999999999999998776433  23332222


Q ss_pred             HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP  259 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~  259 (440)
                      .... .........+|+  +++++   +    .++.++.+++|.++.................. +.|.+ ++.+   ..
T Consensus       168 ~~~~-~~~~~~~~~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lp~~~~~~g~s~~~  236 (381)
T PRK03633        168 VLAA-ILPLLFTRILNQ--QAENH---D----STSIWPMLKLRQARLGVNGCIISGIVLGSLYG-LMPLYLNHQGMSDAS  236 (381)
T ss_pred             HHHH-HHHHHHhcccCC--CCCCC---C----CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHH
Confidence            2111 111112122222  11111   1    12334566777776543332222222222222 34444 4333   45


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY  339 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  339 (440)
                      .+...+...++.++++...+++.|| +++++.+..+.....++.... .    ..  .      .......+.+++.+..
T Consensus       237 ~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~-~----~~--~------~~~~~~~l~g~~~~~~  302 (381)
T PRK03633        237 IGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAM-L----SQ--A------AMAPALFILGAAGFTL  302 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHH-h----hh--H------HHHHHHHHHHHHHHhH
Confidence            6778888889999999999999998 999988877766666554333 1    00  1      1112222333334456


Q ss_pred             hhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432        340 CPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS  409 (440)
Q Consensus       340 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (440)
                      .|...+.+.|..|+++++...+..+...++|..++|.+.   |.+.| ..+++..|.+.+.+.++..+..
T Consensus       303 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~---G~l~~-~~g~~~~f~~~~~~~l~~~~~~  368 (381)
T PRK03633        303 YPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFT---AMLMQ-NYSDNLLFIMIASVSFIYLLML  368 (381)
T ss_pred             HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCccHHHHHHHHHHHHHHHHH
Confidence            788888888888888888888888888999999999944   77878 7788888888877776554433

>TIGR00899 2A0120 sugar efflux transporter

Probab=100.00  E-value=3.1e-30  Score=241.31  Aligned_cols=360  Identities=12%  Similarity=0.044  Sum_probs=253.6

Q ss_pred             HHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHH-HhHHHHHh-hhhcc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICIS-YGIVYTLC-CLTKF   98 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~-~~~~~~~~-~~~~~   98 (440)
                      ...+...++.++..|.++... +++|.|++++|++.++......+.+|+.|+++||+||||.++. +.....++ .++++
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~   83 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW   83 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence            345556666777888886644 7899999999999888888888888999999999999887655 55555555 57788


Q ss_pred             cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q psy10432         99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLT--FARATFGSGLFAIVSGFTAHFFADILNLGPI  176 (440)
Q Consensus        99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~  176 (440)
                      +++++.+++.|++.|.+.+...|...++..      |+.|+++|++.  .+......++|..+||.+++.+.+.+||  |
T Consensus        84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~--~  155 (375)
T TIGR00899        84 NRNYFLLLVLGVLLSSFASTANPQLFALAR------EHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGF--T  155 (375)
T ss_pred             cchHHHHHHHHHHHHhhhhhhHHHHHHHHH------HHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhccc--H
Confidence            899999999999998888777676555555      88777777654  6788888999999999999999998899  8


Q ss_pred             hhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hc
Q psy10432        177 APFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EV  255 (440)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  255 (440)
                      ..|++.+...++..+..++.+||+++++++++  .    .++.+..+++|+++......++............+.++ +.
T Consensus       156 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (375)
T TIGR00899       156 VMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL--T----RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHE  229 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcccCccccc--C----cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            88888877666666666666787654332211  1    12334466777777655544444443333323233333 33


Q ss_pred             cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHH
Q psy10432        256 LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIY  332 (440)
Q Consensus       256 ~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (440)
                      .+   .+.+..........+++.++.+++.|| +++|+.+..+.....+..... ...   +..+      .......+.
T Consensus       230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~  298 (375)
T TIGR00899       230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGL-AAD---NSLW------ALLMLQLLN  298 (375)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHH-HHH---HHHH------HHHHHHHHH
Confidence            33   556666666667778888999999998 999988776655444333222 111   1111      223333344


Q ss_pred             HHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        333 EISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      +++.|...+......+|..|+ +++++.++.+...++|..++|.+.   +.+.+ ..+++..|...+++.+++.+....
T Consensus       299 g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~---g~~~~-~~g~~~~~~~~~~~~~~~~~~~~~  372 (375)
T TIGR00899       299 AIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVG---GILAE-RWSYHAVYWFAIVMLIVALFCLLL  372 (375)
T ss_pred             HHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHH---HHHHH-hccchhHHHHHHHHHHHHHHHHhe
Confidence            556676777777788888775 567999999999999999999854   66667 678899999888887777666543

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=2.1e-30  Score=245.04  Aligned_cols=353  Identities=13%  Similarity=0.119  Sum_probs=241.8

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS  100 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~  100 (440)
                      +......+......+..+.+.+++|.|+++++++.++......+.+++.|+++||+|||++++.+.++.+++ .++.+++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~   98 (405)
T TIGR00891        19 LGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP   98 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc
Confidence            333444444566778888888999999999999888888888888889999999999999999999988888 6788899


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCchhh
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN--LGPIAP  178 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~~~  178 (440)
                      +++.+++.|++.|++.+...+...+++.      |++|+++|++++++.+.+..+|.++++.+++.+.+..+  |  |..
T Consensus        99 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w--~~~  170 (405)
T TIGR00891        99 GYITMFIARLVIGIGMGGEYGSSAAYVI------ESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW--RAL  170 (405)
T ss_pred             cHHHHHHHHHHHHhhhhhhhHHHHHHHH------HhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH--HHH
Confidence            9999999999999999999887777777      99999999999999999999999999999999988876  7  888


Q ss_pred             HHHHHHHHHHHHHHHHHhccccCCCCCccCC--CCccchhhh------hhh--------hc-cCcc----hHHHHHHHHH
Q psy10432        179 FAVAIPFLLGSTLFIYFCWEEHYDPKTAKSS--LLPNSMFSS------LKF--------LF-TNPC----LLTLGIVQSI  237 (440)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~~~~~~------~~~--------~~-~~~~----~~~~~~~~~~  237 (440)
                      |.+.....++ .++.....||+++.++++++  ...+...+.      .+.        .. +.++    +........+
T Consensus       171 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (405)
T TIGR00891       171 FFISILPIIF-ALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLF  249 (405)
T ss_pred             HHHHHHHHHH-HHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHH
Confidence            8776554443 33344456776432111100  000000000      000        00 0011    1111222222


Q ss_pred             HHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432        238 YEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL  313 (440)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (440)
                      ............++++ +..+   .+.+.......++.++++++.+++.|| +++|+.+..+.....+........   .
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~---~  325 (405)
T TIGR00891       250 ANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFAI---G  325 (405)
T ss_pred             HHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHHh---C
Confidence            2222222222233333 2233   567888888999999999999999997 999988777665543332222111   1


Q ss_pred             ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hh
Q psy10432        314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IH  392 (440)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~  392 (440)
                      ...+      .......+.+++.+...+.....++|..|+++|++++|+.+...+++..++|.+.   |.+.| ..| |+
T Consensus       326 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~---g~l~~-~~g~~~  395 (405)
T TIGR00891       326 ANVA------VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIG---ALLAQ-RLDEYG  395 (405)
T ss_pred             CchH------HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHH---HHHHH-hccccc
Confidence            1111      1222323333344455667778889999999999999999999999999999955   77777 556 66


Q ss_pred             HHHHH
Q psy10432        393 SVFVV  397 (440)
Q Consensus       393 ~~~~~  397 (440)
                      ..+..
T Consensus       396 ~~~~~  400 (405)
T TIGR00891       396 TALAS  400 (405)
T ss_pred             hhHHh
Confidence            55544

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=100.00  E-value=1e-29  Score=237.85  Aligned_cols=329  Identities=14%  Similarity=0.141  Sum_probs=239.9

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ..+..|.+|.+.+++|.|+++++++.++......+..++.|+++||+|||+.+..+..+.+++ .++.++++++.+++.|
T Consensus         7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   86 (377)
T PRK11102          7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR   86 (377)
T ss_pred             HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence            455778998999999999999999877777777777789999999999999999999999888 6778889999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      ++.|++.+...+...+++.      |++|+|+|++++++.+....+|..++|.+++.+.+..+|  +..+.+.....++.
T Consensus        87 ~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~  158 (377)
T PRK11102         87 FLHGLAAAAASVVINALMR------DMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSW--HAIFWVLALAAILA  158 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh--HHHHHHHHHHHHHH
Confidence            9999999998777666776      999999999999999999999999999999999998898  88887777666665


Q ss_pred             HHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHH
Q psy10432        190 TLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFS  265 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~  265 (440)
                      .++..+..||+++++++++ .+.++..+++++.+++|+++...+...+.....+.+....++++ +..+   .+.+....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~  237 (377)
T PRK11102        159 AALVFFFIPETLPKERRQP-FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFA  237 (377)
T ss_pred             HHHHHHhCCccCcccccCC-CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHH
Confidence            5555666777654332221 12223345666788889888776666666555555544334444 3333   67888889


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHh
Q psy10432        266 CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGY  345 (440)
Q Consensus       266 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  345 (440)
                      ...++.++++++.+++.|| +++|+.+..+.....+..+.+..........+      .......+.....+...+....
T Consensus       238 ~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  310 (377)
T PRK11102        238 LNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMGIWLVVSALLDLGFW------ALVVGVAAFVGCVSMISSNAMA  310 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH------HHHHHHHHHHHHHHHhhHHHHH
Confidence            9999999999999999998 99999888777655444333312111111111      1222332333334444444555


Q ss_pred             HhccCCcchhhHHHHHHhhhhhh-hHHHHHHH
Q psy10432        346 LRGRIIPEKARATITNWLRVPTN-FITCFTLI  376 (440)
Q Consensus       346 ~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~  376 (440)
                      ...+..| +++|++.++.+.... ++..+++.
T Consensus       311 ~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~  341 (377)
T PRK11102        311 VILDEFP-HMAGTASSLAGTLRFGIGAIVGAL  341 (377)
T ss_pred             HHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence            5666655 789999998776543 55666665

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=100.00  E-value=1.1e-29  Score=235.64  Aligned_cols=365  Identities=11%  Similarity=0.042  Sum_probs=250.2

Q ss_pred             HHHHHHHHhhhhhHhhhHh-hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc---
Q psy10432         25 FLATFSDWIQGPYVYKVYK-DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS---   99 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~---   99 (440)
                      .+++....+.++..+.+.+ |+|+|++|.+++.++..+.+.+...+.|++.||+|.|+++..+.++.++. ...+++   
T Consensus        44 ~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~  123 (462)
T PRK15034         44 LLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN  123 (462)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence            3344445566777766665 89999999999888777777777778899999999999999999998887 566655   


Q ss_pred             --chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----hhcc
Q psy10432        100 --SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA-----DILN  172 (440)
Q Consensus       100 --~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----~~~g  172 (440)
                        ++++.+++.|++.|++ +...+.....+.      +++|+++||+++|+.....++|..+++++...+.     +.+|
T Consensus       124 ~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs------~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G  196 (462)
T PRK15034        124 PNTPFGIFIVIALLCGFA-GANFASSMGNIS------FFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLG  196 (462)
T ss_pred             cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHH------HHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence              8999999999999998 445465555555      9999999999999997777777766655554432     3334


Q ss_pred             cC-----------chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhH
Q psy10432        173 LG-----------PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGI  241 (440)
Q Consensus       173 w~-----------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (440)
                      |+           ++...++-.++.++..++.++..+|.++ ++       .+ .++.+..+|+|+.|.+.+..++.++.
T Consensus       197 ~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~~-------~~-~~~~~~vlk~~~~Wllslly~~tFG~  267 (462)
T PRK15034        197 VNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-SR-------AS-IADQLPVLQRLHLWLLSLLYLATFGS  267 (462)
T ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-cc-------cC-HHHHHHHhCCCchhHHHHHHHHHHHH
Confidence            31           1444444444444455555555444322 11       11 33556789999999999988888777


Q ss_pred             HHHHHHhhhhhh--hccC-CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchh
Q psy10432        242 MYTFIFVWTPVL--EVLS-PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRR  318 (440)
Q Consensus       242 ~~~~~~~~~~~~--~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (440)
                      +..+.. +.|.+  +.++ ...........+...+.+++.|+++|| +|+++.+.++.....+.....+...........
T Consensus       268 fvg~s~-~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~  345 (462)
T PRK15034        268 FIGFSA-GFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIFSALLFLTLPGTGSGNF  345 (462)
T ss_pred             HHHHHH-HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHHHHHHHHHhccccccHH
Confidence            776644 44444  3333 222222334457778889999999998 999999988887776665443222211111111


Q ss_pred             hcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcc---------------------hhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432        319 VLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPE---------------------KARATITNWLRVPTNFITCFTLIF  377 (440)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~---------------------~~~g~~~g~~~~~~~~g~~~~~~~  377 (440)
                      .    .....+....++.|+.+...+-++.+++|+                     ++.|.+.|+....+.+|+.+.|..
T Consensus       346 ~----~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~  421 (462)
T PRK15034        346 I----AFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQA  421 (462)
T ss_pred             H----HHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHH
Confidence            1    233333344456677666666666666663                     267889999999999999999986


Q ss_pred             hhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        378 IKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +   +...+...++...|....+..+++.++.+....
T Consensus       422 ~---g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~  455 (462)
T PRK15034        422 F---GMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG  455 (462)
T ss_pred             H---HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence            6   444443456788899988888888888776654

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.3e-30  Score=228.73  Aligned_cols=369  Identities=15%  Similarity=0.122  Sum_probs=285.4

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS  100 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~  100 (440)
                      ....++++...+.++..+.+.+|+|+|++|.+++..+..+.+.+...+.|.+.||+|.|++..++.++..+- ...+++.
T Consensus        21 ~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~  100 (417)
T COG2223          21 LAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAV  100 (417)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHc
Confidence            344455555666777777777999999999999999999999999999999999999999999999998886 5555554


Q ss_pred             ---hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cC
Q psy10432        101 ---DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN---LG  174 (440)
Q Consensus       101 ---~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~  174 (440)
                         +++++++.+++.|++.+.+ ...      ...+++++|||++|.++|+.. ..++|..+...++..+....+   | 
T Consensus       101 ~~~~~~~ll~~gll~G~~GasF-av~------m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w-  171 (417)
T COG2223         101 TYPSTWQLLVIGLLLGLAGASF-AVG------MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW-  171 (417)
T ss_pred             cCCchHHHHHHHHHHhccccee-hcc------cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH-
Confidence               4569999999999998886 433      344459999999999999999 999999999999999998888   7 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchh-hhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432        175 PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMF-SSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL  253 (440)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (440)
                       +....+..+..++..+..++..+|.++.+++.+     +.. .+++.+++|++.|.+.+.++..++++..+....+.++
T Consensus       172 -~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~-----~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~  245 (417)
T COG2223         172 -RNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK-----PQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYL  245 (417)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc-----ccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             666666666666667777777777665432221     112 5778899999999999999888888877766445444


Q ss_pred             -hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc-cchhhcchhHHHHH
Q psy10432        254 -EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF-DSRRVLSTNLCFVA  328 (440)
Q Consensus       254 -~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  328 (440)
                       ++++   .++|.......+...+.++++|+++|| +|.+|.+......++++...+........ .....    .....
T Consensus       246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~  320 (417)
T COG2223         246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFV----VFVAV  320 (417)
T ss_pred             HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHHHHHHHHHccccccccCcchH----HHHHH
Confidence             5555   677788888888899999999999998 99999999888888887766633221111 01111    23444


Q ss_pred             HHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        329 FLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      +.....+.|..+...+.++..+.| ++.|.+.|+....+++|+..-|..+   +...+...++...|.+...+.+++.+.
T Consensus       321 ~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~---g~~~~~tg~~~~~f~~~~~~~~~a~v~  396 (417)
T COG2223         321 FLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAF---GVSLDLTGSYTGAFMLLLAFYLVALVL  396 (417)
T ss_pred             HHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHH---HHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            455566778877777778877765 5889999999999999999999866   556563335888999998888888877


Q ss_pred             HHHhhh
Q psy10432        409 SCVFKR  414 (440)
Q Consensus       409 ~~~~~~  414 (440)
                      .+..+.
T Consensus       397 ~~~~y~  402 (417)
T COG2223         397 TWALYA  402 (417)
T ss_pred             HHHHHH
Confidence            766655

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=100.00  E-value=7.2e-30  Score=242.74  Aligned_cols=373  Identities=16%  Similarity=0.229  Sum_probs=284.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-
Q psy10432         15 RLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-   93 (440)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-   93 (440)
                      +..+..+...+++.+++++.....+-+..+..-|+..++++..+..+...++++++|.++||++|||+++.+.++.++. 
T Consensus        10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~   89 (524)
T PF05977_consen   10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA   89 (524)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence            3445566888889999998888887666777889999999999999999999999999999999999999988777654 


Q ss_pred             h-h--hcc--cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         94 C-L--TKF--SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus        94 ~-~--~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                      . +  ...  ..+.+.+++.-++.|++.+...|+.++.+.      |.+|+|+..+++++.+...++..++||.++|.+.
T Consensus        90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip------~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv  163 (524)
T PF05977_consen   90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIP------ELVPKEDLPAANALNSISFNIARIIGPALGGILV  163 (524)
T ss_pred             HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            2 2  111  247888999999999999999998888888      9999999999999999999999999999999999


Q ss_pred             hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432        169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV  248 (440)
Q Consensus       169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (440)
                      ..+|-  ...|.+.+...++.... ...++++.++++.+++...++.++.++.+.++|.+....+..+++......+.. 
T Consensus       164 a~~G~--~~~f~inalsfl~~i~~-l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~a-  239 (524)
T PF05977_consen  164 AFFGA--AAAFLINALSFLISILA-LLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWA-  239 (524)
T ss_pred             HHHHH--HHHHHHHHHHHHHHHHH-HHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHH-
Confidence            98887  67777776655544333 333343333222222334566788899999988877665555444444333333 


Q ss_pred             hhhhh--hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432        249 WTPVL--EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN  323 (440)
Q Consensus       249 ~~~~~--~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (440)
                      ..|.+  +..   ....|++.+..++|.++|+++.+++.+| .++++.+..+.+..+++.+.+ .+   ....+      
T Consensus       240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~l-al---~~~~~------  308 (524)
T PF05977_consen  240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLL-AL---SPSFW------  308 (524)
T ss_pred             hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHH-hc---chHHH------
Confidence            44555  222   2778999999999999999999999997 888888777777666655444 21   11112      


Q ss_pred             HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432        324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL  403 (440)
Q Consensus       324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (440)
                      .....+.+.+++........++.+++.+|++.||++++++++....+..+|..+.   |.+.+ ..|.+..+.++++..+
T Consensus       309 ~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~---G~la~-~~g~~~al~~a~~~ll  384 (524)
T PF05977_consen  309 LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLW---GFLAD-HFGVRTALLIAGAALL  384 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCHHHHHHHHHHHHH
Confidence            3444555566666667778889999999999999999999999999999999844   77888 8888888888887766


Q ss_pred             HHHHHHHHh
Q psy10432        404 VALLASCVF  412 (440)
Q Consensus       404 ~~~~~~~~~  412 (440)
                      ++.++....
T Consensus       385 l~~~~~~~~  393 (524)
T PF05977_consen  385 LSALIALRF  393 (524)
T ss_pred             HHHHHHHHh
Confidence            666655443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK11043 putative transporter; Provisional

Probab=100.00  E-value=3.1e-29  Score=236.36  Aligned_cols=335  Identities=13%  Similarity=0.113  Sum_probs=240.4

Q ss_pred             HHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHH
Q psy10432         27 ATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYIL  105 (440)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l  105 (440)
                      ...+..+..|..+++.+++|.|++++++..++......+.++++|+++||+|||+.+..+..+..++ .++.++++++.+
T Consensus        18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l   97 (401)
T PRK11043         18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQL   97 (401)
T ss_pred             HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence            3445667778888888999999999999877777777777789999999999999999999888887 677888999999


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHH
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPF  185 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~  185 (440)
                      ++.|+++|++.+...+...+.+.      |+++++++++..+.......+|..++|.+++.+.+.+||  +..+.+....
T Consensus        98 ~~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~--~~~~~~~~~~  169 (401)
T PRK11043         98 LVLRFVQAVGVCSAAVIWQALVI------DRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGW--QAIFATLFAI  169 (401)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHH------HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh--HHHHHHHHHH
Confidence            99999999998877665555555      999999999999999999999999999999999999899  8877777666


Q ss_pred             HHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---Cchhh
Q psy10432        186 LLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGL  262 (440)
Q Consensus       186 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~  262 (440)
                      .++..+... ..+|+++++++      ++.++++++++++|+++...+...+.....+.+....+.+++..+   .+.++
T Consensus       170 ~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~  242 (401)
T PRK11043        170 TLLLILPTL-RLKPSKKARKQ------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGL  242 (401)
T ss_pred             HHHHHHHHH-HcCCCCCcccc------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHH
Confidence            555444433 34544322111      112346677888888776555444444444444443444444444   45677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432        263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV  342 (440)
Q Consensus       263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  342 (440)
                      .+....++.++++...+++.|| +++++..........++...+............     .......+.+++.+...|.
T Consensus       243 ~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  316 (401)
T PRK11043        243 SYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLV-----PLLIPFCVMAAANGAIYPI  316 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHH-----HHHHHHHHHHHHHHHHHHH
Confidence            7777788889999999999997 988887666555555444333122111111111     2334444556667777887


Q ss_pred             HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432        343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  386 (440)
                      ......+..| +++|++.|+.+.....+...++.+.   +...+
T Consensus       317 ~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~---g~l~~  356 (401)
T PRK11043        317 VVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLV---SALIS  356 (401)
T ss_pred             HHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHH---HHccC
Confidence            7777666655 5799999999999888888888855   44444

>PRK15075 citrate-proton symporter; Provisional

Probab=100.00  E-value=6.8e-30  Score=242.81  Aligned_cols=344  Identities=17%  Similarity=0.154  Sum_probs=216.7

Q ss_pred             HHHHHHHHHhhhhhHhhhHhhcCCChhhHHHH------HHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh
Q psy10432         24 FFLATFSDWIQGPYVYKVYKDYGYDEKNIALL------YIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT   96 (440)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~------~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~   96 (440)
                      .+.........+...|.+.+|++.++.+.+..      +..+++...+.+++.|+++||+||||.++.+..+.+++ .++
T Consensus        24 ~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~  103 (434)
T PRK15075         24 NFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI  103 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Confidence            33334445567788888889999887765432      12223222344468999999999999999999999998 788


Q ss_pred             cccchhH--------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         97 KFSSDFY--------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus        97 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                      +++++++        .++++|+++|++.+...+...+++.      |++|+++|++.+++.+...++|..+++.+++.+.
T Consensus       104 ~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~------e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~  177 (434)
T PRK15075        104 AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLA------EIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN  177 (434)
T ss_pred             HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH------hhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8998877        4689999999999988776666666      9999999999999999999999888888887763


Q ss_pred             --------hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHH-HHHH
Q psy10432        169 --------DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQ-SIYE  239 (440)
Q Consensus       169 --------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  239 (440)
                              +.+||  |.+|++...... .........||+++..+++   ++.+.++.++...++++.+...... .+..
T Consensus       178 ~~~~~~~~~~~gW--r~~f~~~~~~~~-~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (434)
T PRK15075        178 QWLSPAQMAEWGW--RIPFLIGCLIVP-FIFLIRRSLEETEEFLARK---HRPSMREIFRSLAANWRIVLAGMLMVAMTT  251 (434)
T ss_pred             HhCCHHHHhccch--HHHHHHHHHHHH-HHHHHHHhcCCCHHHHHhh---hccccccHHHHHHHhHHHHHHHHHHHHHHH
Confidence                    35677  888876543322 2222222334432111111   1111122233444555544432222 2222


Q ss_pred             hHHHHHHHhhhhhh-hc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc
Q psy10432        240 GIMYTFIFVWTPVL-EV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF  314 (440)
Q Consensus       240 ~~~~~~~~~~~~~~-~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (440)
                      ...+.. ..+.|.+ +. .+   .+.++......++.+++.++.|++.|| +++|+.+..+.....+.............
T Consensus       252 ~~~~~~-~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~  329 (434)
T PRK15075        252 VSFYLI-TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLVAAP  329 (434)
T ss_pred             HHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            333333 3345554 32 33   456677778888899999999999998 99998776654443322211111111111


Q ss_pred             cchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhhccccccCccchh
Q psy10432        315 DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIKNEDAEGGKLIAI  391 (440)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~  391 (440)
                       ...     .......+.+++.+...+.......|..|++.|+++.|+.+..... ++.++|.+.   +.+.| ..++
T Consensus       330 -~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~---g~i~~-~~g~  397 (434)
T PRK15075        330 -SFA-----RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS---TWLIH-VTGD  397 (434)
T ss_pred             -chH-----HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH---HHHHH-hcCC
Confidence             111     1122222333455666666667888999999999999986655554 577788854   55666 4453

>PRK03699 putative transporter; Provisional

Probab=99.98  E-value=2.2e-29  Score=236.50  Aligned_cols=352  Identities=13%  Similarity=0.072  Sum_probs=244.9

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ....++.+|++.+++|+|.++.+++.+.......+..++.|++.||+|||+++..+..+..++ .+..++++++.+++.|
T Consensus        23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~  102 (394)
T PRK03699         23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAM  102 (394)
T ss_pred             HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHH
Confidence            455777888999999999999998777666666666679999999999999999999988888 6788889999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccCchhhHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-ILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~~~~~~~~~~~~~  188 (440)
                      +++|++.+...+...+.+.      |.+|+++|+++++..+...++|..++|.+.+.+.+ ..||  |+.|...+...++
T Consensus       103 ~l~G~~~g~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw--~~~f~~~~~~~~~  174 (394)
T PRK03699        103 FVLGVVSGITMSIGTFLIT------HVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW--YWVYACIGLVYVA  174 (394)
T ss_pred             HHHHHhhHhhccchhHHhh------hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH--HHHHHHHHHHHHH
Confidence            9999999988777666666      99999999999999999999999999999888764 5688  8888776665554


Q ss_pred             HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC---CchhhH
Q psy10432        189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGLV  263 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~~  263 (440)
                      ..++.++  ++.|+.++++++ +.++   ..+.. .++.++...+..++.....+.+.. |.|.+  +..+   .+.+..
T Consensus       175 ~~~~~~~--~~~p~~~~~~~~-~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~~~~  246 (394)
T PRK03699        175 IFILTLF--SEFPALGKHAPK-ADKP---VAKEK-WGIGVLFLAIAALLYILAQLTFIS-WVPEYAQKKFGMSLEDAGNL  246 (394)
T ss_pred             HHHHHHh--cCCccccccCcc-ccCc---ccccc-CChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCChHHhhHH
Confidence            4333322  221111111110 1111   11111 235555555555555445444444 44444  3334   567888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhH
Q psy10432        264 FSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVT  343 (440)
Q Consensus       264 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  343 (440)
                      .+...++..+++++.+++.|| +++|+.+.....+..+....+ ..  .++ .+      .........+++.+...+..
T Consensus       247 ~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~-~~--~~~-~~------~~~~~~~~~G~~~~~~~~~~  315 (394)
T PRK03699        247 VSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLF-VN--TDD-PS------HLLYAILGLGFFSSAIYTTI  315 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHH-HH--cCC-ch------HHHHHHHHHHHHHHHHHHHH
Confidence            888889999999999999998 999888776665544433222 11  111 11      12223334445555566666


Q ss_pred             HhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        344 GYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       344 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      .+...+..| +.+++..|......++|..++|.+.   |.+.+ ..|++..++..+++.+++.+......+
T Consensus       316 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~---G~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~  381 (394)
T PRK03699        316 ITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVT---SPIVA-HFGLQAALLTANGLYAVVFVMCILLGF  381 (394)
T ss_pred             HHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHH---HHHHH-HhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence            666666655 4456778888889999999999955   77777 778888888877777776555444443

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.98  E-value=6.4e-30  Score=246.40  Aligned_cols=362  Identities=15%  Similarity=0.130  Sum_probs=224.0

Q ss_pred             hhhhhHhhhHhhcCCChhh----HHH--HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHH-
Q psy10432         33 IQGPYVYKVYKDYGYDEKN----IAL--LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYI-  104 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~----~~~--~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~-  104 (440)
                      +.+...|.+.++++.+.++    ++.  .+++.++...+.+++.|+++||+|||+++..+.++++++ +++++++|++. 
T Consensus        34 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~  113 (490)
T PRK10642         34 VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATI  113 (490)
T ss_pred             HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence            3445555556777533221    222  245555556666679999999999999999999999999 78999999875 


Q ss_pred             -------HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Q psy10432        105 -------LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD--------  169 (440)
Q Consensus       105 -------l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------  169 (440)
                             +++.|+++|++.|...+...+++.      |++|+++|++..++...+..+|..+|+.+...+..        
T Consensus       114 g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~------e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~  187 (490)
T PRK10642        114 GIWAPILLLLCKMAQGFSVGGEYTGASIFVA------EYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFL  187 (490)
T ss_pred             HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHH------HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhc
Confidence                   789999999999999887777777      99999999999999998888898888877655532        


Q ss_pred             hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCc-----c--CCCCccchhhhhhhhcc-CcchHHHHH-HHHHHHh
Q psy10432        170 ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA-----K--SSLLPNSMFSSLKFLFT-NPCLLTLGI-VQSIYEG  240 (440)
Q Consensus       170 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~--~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~  240 (440)
                      .+||  |+.|++.....++ .++....+||+++..+.     +  ++...++...+++.+++ +++.+.... ..++...
T Consensus       188 ~~gW--R~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (490)
T PRK10642        188 DWGW--RIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNV  264 (490)
T ss_pred             CccH--HHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            3567  9999887655443 34445567887542110     0  00000011123444443 222222222 2222334


Q ss_pred             HHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccc
Q psy10432        241 IMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDS  316 (440)
Q Consensus       241 ~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (440)
                      ..+......++++ +..+   ...++......++.+++.++.|++.|| +|||+.+..+.....+....++.......  
T Consensus       265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~--  341 (490)
T PRK10642        265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALFVLAIPAFILINSNV--  341 (490)
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHhCCC--
Confidence            4444444344444 3333   334556666778888999999999998 99999877666543333222212111111  


Q ss_pred             hhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHH
Q psy10432        317 RRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFV  396 (440)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (440)
                      ..     ....+..+.+++.+...+.......+.+|++.|+++.|........++.++|.+.   +.+.+...++...+.
T Consensus       342 ~~-----~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~---g~l~~~~~~~~~~~~  413 (490)
T PRK10642        342 IG-----LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLA---AWLVESTQNLMMPAY  413 (490)
T ss_pred             HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCchHHHH
Confidence            11     2233333344444555555666777889999999999986666677777888754   444431222344444


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q psy10432        397 VCTACLLVALLASCVFKR  414 (440)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~  414 (440)
                      ...+..+++.+..+..++
T Consensus       414 ~~~~~~~i~~~~~~~~pe  431 (490)
T PRK10642        414 YLMVVAVIGLITGVTMKE  431 (490)
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            444444444444444443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.98  E-value=1.7e-29  Score=241.96  Aligned_cols=361  Identities=13%  Similarity=0.095  Sum_probs=235.9

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      ......++.|.+.+++|+|.++.+++.........+..++.|+++||+|||+++..+.++.+++ ++.+++++++.+++.
T Consensus        51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~  130 (476)
T PLN00028         51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAV  130 (476)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            3445677888888999999999988655555545555579999999999999999999888888 678889999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----h-----cccCchhhH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD----I-----LNLGPIAPF  179 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----~-----~gw~~~~~~  179 (440)
                      |++.|++.+...+ ...++.      |++|+++|++++++.....++|..+++.+...+..    .     .||  |+.|
T Consensus       131 r~l~G~~~~~~~~-~~~~i~------~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW--r~~f  201 (476)
T PLN00028        131 RFFIGFSLATFVS-CQYWMS------TMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW--RIAF  201 (476)
T ss_pred             HHHHHHHHHhhHH-HHHHHH------HhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh--HHHH
Confidence            9999999876532 333444      99999999999999988777787777666654432    1     467  8888


Q ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCc---cC-CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-h
Q psy10432        180 AVAIPFLLGSTLFIYFCWEEHYDPKTA---KS-SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-E  254 (440)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  254 (440)
                      ++.+++.++..++.++..++.++.+.+   ++ +.++++..+.+++.++++++|...+..++.....+.+.+..++++ +
T Consensus       202 ~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  281 (476)
T PLN00028        202 FVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD  281 (476)
T ss_pred             HHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            887777665555544443333321100   00 001112234456677888888766665554444444433334444 3


Q ss_pred             ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCch----hHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        255 VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPET----MLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       255 ~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      ..+   ...+...+...++.++++++.|+++|| +++|+    ..........+..+.........+  ..     ....
T Consensus       282 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~--~~-----~~~~  353 (476)
T PLN00028        282 RFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQTLGGVFCIWLGRANS--LG-----AAIV  353 (476)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHHHHHHHHHHHhcccch--HH-----HHHH
Confidence            333   567788888899999999999999997 76541    222222222222111111111111  11     1222


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      .+.+++++.+...+....+..+. +++.+|++.|+.+...++|..++|.+.   + ..+ ..+|+..|.+.+++.+++.+
T Consensus       354 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l~---~-~~~-~~~y~~~f~~~~~~~~i~~~  427 (476)
T PLN00028        354 VMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLLF---F-TGS-SYSTETGISLMGVMIIACTL  427 (476)
T ss_pred             HHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHHH---H-hcC-CccHhhHHHHHHHHHHHHHH
Confidence            23333333444444455555565 457999999999999999999998854   2 223 45688899998888888877


Q ss_pred             HHHHhh
Q psy10432        408 ASCVFK  413 (440)
Q Consensus       408 ~~~~~~  413 (440)
                      +.+..+
T Consensus       428 ~~~~~~  433 (476)
T PLN00028        428 PVAFIH  433 (476)
T ss_pred             HHHhee
Confidence            776654

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.98  E-value=4.9e-30  Score=244.53  Aligned_cols=354  Identities=12%  Similarity=0.053  Sum_probs=245.3

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHH-HHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLY-GRLF  111 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~-~r~l  111 (440)
                      ...+.+++.+++|.+.++.+++.+.......+..|+.|+++||+|||++++.+.++..++ ++++++++++.+++ .|++
T Consensus        38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l  117 (455)
T TIGR00892        38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI  117 (455)
T ss_pred             hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            455677888999999999999887777777777789999999999999999999888888 67788899988865 5799


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      +|++.+...+...+.+.      ++++ ++|+++.++.+.+..+|..++|++++.+.+.+||  |+.|++.+++.++..+
T Consensus       118 ~G~~~~~~~~~~~~~~~------~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw--r~~f~~~~~~~~~~~v  188 (455)
T TIGR00892       118 TGLGLAFNFQPSLTMLG------KYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW--RGSFLILGGLLLHCCV  188 (455)
T ss_pred             HHhcchhhhhHHHHHHH------HHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHH
Confidence            99999876554444444      8885 7999999999999999999999999999999899  8888887776654444


Q ss_pred             HHHHhccccCCC----CC--c--c-CCCCcc----c---hhhhh--hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432        192 FIYFCWEEHYDP----KT--A--K-SSLLPN----S---MFSSL--KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL  253 (440)
Q Consensus       192 ~~~~~~~e~~~~----~~--~--~-~~~~~~----~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (440)
                      ..++..|+++.+    .+  +  + +....+    .   ...+.  .+++++|.++......++...+.+......+++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~  268 (455)
T TIGR00892       189 CGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYA  268 (455)
T ss_pred             HHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHH
Confidence            333333322110    00  0  0 000000    0   00111  1467888888776666665555544444445554


Q ss_pred             hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhc-cCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHH
Q psy10432        254 EVLS---PPLGLVFSCFMISIMIGSKIYSILILKY-FKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAF  329 (440)
Q Consensus       254 ~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (440)
                      +..+   .+.+...+..+++.++++++.+++.||+ .++++...........+...+ ......+ .+      ......
T Consensus       269 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~-~~------~~~i~~  340 (455)
T TIGR00892       269 KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL-LCALAGD-YT------GLVIYC  340 (455)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH-HHHHhch-HH------HHHHHH
Confidence            4333   6778888889999999999999999961 223333332222221111111 1111111 11      233444


Q ss_pred             HHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccc-hhhHHHHHHHHHHHHHHHH
Q psy10432        330 LIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLI-AIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       330 ~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  408 (440)
                      .+.+++.+...+...+.+.+.+|++++++..|+.+...++|..++|.+.   |.+.+ .. +++..|.+++++.+++.+.
T Consensus       341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~---G~l~~-~~g~~~~~f~~~~~~~li~~~~  416 (455)
T TIGR00892       341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA---GRLVD-ATKNYKYIFYASGSIVVSAGLF  416 (455)
T ss_pred             HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce---eeeeh-hcCCcchHHHHhhHHHHHHHHH
Confidence            4566677777888888899999999999999999999999999999944   77777 44 5888888888776666553

>PRK10054 putative transporter; Provisional

Probab=99.98  E-value=9.6e-30  Score=238.31  Aligned_cols=358  Identities=11%  Similarity=0.068  Sum_probs=256.8

Q ss_pred             HHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc
Q psy10432         20 YFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK   97 (440)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~   97 (440)
                      .....+....+.....|+++... +++|.|+.++|++.++......+.+|+.|+++||+|||++++.+.++..++ .+..
T Consensus        12 l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~   91 (395)
T PRK10054         12 LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIP   91 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Confidence            33444555556667778776655 679999999999888888888888899999999999999999999888888 6778


Q ss_pred             ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q psy10432         98 FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIA  177 (440)
Q Consensus        98 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~  177 (440)
                      ++++++.+++.|.+.|.+.+...+...++..      |..|+++|++++++.....++|..+||.+++.+.+ .+|  +.
T Consensus        92 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~--~~  162 (395)
T PRK10054         92 LVNNVTLVVLFFALINCAYSVFSTVLKAWFA------DNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSI--NL  162 (395)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc--Cc
Confidence            8999999999999998887777777777777      99999999999999999999999999999999876 588  77


Q ss_pred             hHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh---h
Q psy10432        178 PFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL---E  254 (440)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  254 (440)
                      .|...+...++..++..+.+||+++++++++   . + ..+.++.+|||+++...+...+.......+....+.+.   +
T Consensus       163 ~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  237 (395)
T PRK10054        163 PFWLAAICSAFPLVFIQIWVQRSEKAIATET---G-S-VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVA  237 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccccccch---h-h-hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhc
Confidence            8877766665554545555565543322111   1 1 12236778899998877666665554433322222222   2


Q ss_pred             ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHH
Q psy10432        255 VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLI  331 (440)
Q Consensus       255 ~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (440)
                      +.+   ...+..+....+..+......+++.|| .++|+.+..+.....++...+ ....  +..+      .......+
T Consensus       238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~------~~~~~~~~  307 (395)
T PRK10054        238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCFVIGLVGF-IFSG--NSLL------LWGMSAAV  307 (395)
T ss_pred             ccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHHHHHHHHH-HHcc--hHHH------HHHHHHHH
Confidence            222   345666777767777777888999997 888888877776666655433 2111  1111      12333445


Q ss_pred             HHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432        332 YEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL  406 (440)
Q Consensus       332 ~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (440)
                      .+++.+...|.....+.+..|++.+++.++..+ ...+|..+||.+.   |.+.| +.++...|.+.+....++.
T Consensus       308 ~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~---G~l~~-~~g~~~~~~~~~~~~~~~~  377 (395)
T PRK10054        308 FTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVS---GVILT-TLPPWSLFVILALAIVAAW  377 (395)
T ss_pred             HHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHH---HHHHH-HcChhhHHHHHHHHHHHHH
Confidence            555666677888888999999999999998655 5668999999944   78888 7788888877655544443

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.97  E-value=3.6e-29  Score=245.68  Aligned_cols=358  Identities=14%  Similarity=0.078  Sum_probs=250.4

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF  111 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l  111 (440)
                      ..+..+|.+.+++|++..+.+++.++.++...+.++++|+++||+|||+.++++.++.+++ ++++++++++.++++|++
T Consensus       185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l  264 (742)
T TIGR01299       185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLL  264 (742)
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            3666777777999999999988766666666666679999999999999999999988888 678889999999999999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----------CchhhHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL-----------GPIAPFA  180 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw-----------~~~~~~~  180 (440)
                      .|++.+...|...+++.      |++|+++|++.+++...+..+|.++++.++..+...+||           .||+.++
T Consensus       265 ~G~g~g~~~p~~~~~is------E~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~  338 (742)
T TIGR01299       265 SGFGIGGAIPIVFSYFA------EFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVI  338 (742)
T ss_pred             HHHHHHHHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHH
Confidence            99999999887777777      999999999999999999999999999998887765554           2477777


Q ss_pred             HHHHHHHHHHHHHHHhccccCCC----CC--------------ccC----CCC----------------------ccc--
Q psy10432        181 VAIPFLLGSTLFIYFCWEEHYDP----KT--------------AKS----SLL----------------------PNS--  214 (440)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~e~~~~----~~--------------~~~----~~~----------------------~~~--  214 (440)
                      +.++..++ .++..+++||+|+-    .+              ..+    +..                      ..+  
T Consensus       339 i~~lp~ll-~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (742)
T TIGR01299       339 VCAFPCVF-AIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWY  417 (742)
T ss_pred             HHHHHHHH-HHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchh
Confidence            76665544 34456678998641    00              000    000                      000  


Q ss_pred             -------------hhhhhhhhccCcch---HHHHHHHHHHHhHHHHHHHhhhhhh-hcc---------------------
Q psy10432        215 -------------MFSSLKFLFTNPCL---LTLGIVQSIYEGIMYTFIFVWTPVL-EVL---------------------  256 (440)
Q Consensus       215 -------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------  256 (440)
                                   .+..++.+++.+..   +.+.+..+....+++.... |.|.+ ...                     
T Consensus       418 ~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~-w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (742)
T TIGR01299       418 QRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSV-WFPDMIKHLQADDYAALTKNFPGDKVAHFS  496 (742)
T ss_pred             hcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccchhccc
Confidence                         00123334443322   2233444444455555533 54432 110                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy10432        257 --------------------------------------------------------------------------------  256 (440)
Q Consensus       257 --------------------------------------------------------------------------------  256 (440)
                                                                                                      
T Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~  576 (742)
T TIGR01299       497 FNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSF  576 (742)
T ss_pred             cccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccc
Confidence                                                                                            


Q ss_pred             -----C------------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhh
Q psy10432        257 -----S------------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRV  319 (440)
Q Consensus       257 -----~------------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (440)
                           +            ........+..++.+++.++.+++.|| +|||+.+..+.++.+++.+.+ .+..  + ..  
T Consensus       577 ~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~-~~~~--s-~~--  649 (742)
T TIGR01299       577 LHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFL-SFGN--S-ES--  649 (742)
T ss_pred             cccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHH-HHHc--c-HH--
Confidence                 0            001223456668889999999999998 999999988888877776554 2211  1 11  


Q ss_pred             cchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHH
Q psy10432        320 LSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCT  399 (440)
Q Consensus       320 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (440)
                          ..++..++.+++.+..++....++.|.+|++.|++++|+.+....+|.+++|.+.   +.+.+ . +...+|.+++
T Consensus       650 ----~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~---g~L~~-~-~~~~pf~i~a  720 (742)
T TIGR01299       650 ----AMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIF---GSFVG-I-TKAAPILFAS  720 (742)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-h-hhHHHHHHHH
Confidence                1233333445556667788889999999999999999999999999999999854   43433 2 3466777777


Q ss_pred             HHHHHHHHHHHHhhh
Q psy10432        400 ACLLVALLASCVFKR  414 (440)
Q Consensus       400 ~~~~~~~~~~~~~~~  414 (440)
                      ++.+++.++.+.+++
T Consensus       721 ~~lll~~ll~~~LPE  735 (742)
T TIGR01299       721 AALACGGLLALKLPD  735 (742)
T ss_pred             HHHHHHHHHHHhCCC
Confidence            777777666665544

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.97  E-value=4.3e-29  Score=234.74  Aligned_cols=271  Identities=14%  Similarity=0.112  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS  100 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~  100 (440)
                      ........+.....+.+|.+.+++|.|+++.++..++......+..|+.|+++||+|||+.++.+.++..++ .++..++
T Consensus        10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~   89 (392)
T PRK10473         10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE   89 (392)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence            333444445556678898899999999999998777766666666689999999999999999999998888 6777889


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA  180 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~  180 (440)
                      +++.+++.|+++|++.+...+...+++.      |.+|+++|+++.++.+....+|..++|.+++.+.+..+|  +..+.
T Consensus        90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~--~~~~~  161 (392)
T PRK10473         90 TSSLFLAGRFLQGIGAGCCYVVAFAILR------DTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW--QSLFY  161 (392)
T ss_pred             cHHHHHHHHHHHHhhhhHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh--HHHHH
Confidence            9999999999999999988776666666      999999999999999999999999999999998888888  87777


Q ss_pred             HHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC-
Q psy10432        181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS-  257 (440)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-  257 (440)
                      +......+..++.....||++++++++    .++..+..++.++||+++...+...+.......+.. +.|.+  +..+ 
T Consensus       162 ~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~  236 (392)
T PRK10473        162 TMAAMGILVLLLSLFILKETRPARAPA----ASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVN-TSPVLLMEQMGF  236 (392)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCcccCC----ccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHcCC
Confidence            776666655555556677765433211    111233445667788777655544444433333333 33333  3333 


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432        258 --PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS  306 (440)
Q Consensus       258 --~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~  306 (440)
                        .+.+.......++.+++.++.+++.|| +++|+.+..+.....++.+.+
T Consensus       237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~  286 (392)
T PRK10473        237 SRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITL  286 (392)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH
Confidence              456778888899999999999999997 999998887777666655444

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.97  E-value=4.3e-29  Score=239.60  Aligned_cols=381  Identities=15%  Similarity=0.089  Sum_probs=260.4

Q ss_pred             hhHHHHHHHHHHHHHH---HHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-----chhHH
Q psy10432         11 MEFKRLQVRYFIPFFL---ATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-----GRKLI   82 (440)
Q Consensus        11 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~   82 (440)
                      |.++..++|......+   ......+..+.+|...++.|.|.++++....++...  +..+++|+++||+     ||||.
T Consensus         5 ~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~--~~~~l~gpl~Dr~~~~~~Grrr~   82 (491)
T PRK11010          5 YLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY--VFKFLWSPLMDRYTPPFLGRRRG   82 (491)
T ss_pred             HHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCCCchH
Confidence            3444444554444444   333355677778777889999999999864444442  3446999999999     99986


Q ss_pred             -HHHHhHHHHHh-hhhccc---chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHH
Q psy10432         83 -CISYGIVYTLC-CLTKFS---SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA  157 (440)
Q Consensus        83 -l~~~~~~~~~~-~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~  157 (440)
                       ++.+.+..+++ ...++.   ++++.+.+.+++.|++.+...+..+++..      |++|+|||+++.++...+..+|.
T Consensus        83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~------~~~~~~~rg~~~~i~~~g~~lG~  156 (491)
T PRK11010         83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKT------DVLPAEERGAGAAISVLGYRLAM  156 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcChhhhHHHHHHHHHHHHHHH
Confidence             55666666666 444443   47888999999999999998777777777      99999999999999999999999


Q ss_pred             HHHHHHHHHHHh-hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHH
Q psy10432        158 IVSGFTAHFFAD-ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQS  236 (440)
Q Consensus       158 ~~g~~~~~~l~~-~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (440)
                      ++++.+++++.+ ..||  |..|++.+...++..+. .+..||++++++++++ ..++..+++++++++++.+...+...
T Consensus       157 llg~~l~~~l~~~~~GW--r~~f~i~a~l~ll~~l~-~~~~~e~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~ll~~~  232 (491)
T PRK11010        157 LVSGGLALWLADRYLGW--QGMYWLMAALLIPCIIA-TLLAPEPTDTIPVPKT-LEQAVVAPLRDFFGRNNAWLILLLIV  232 (491)
T ss_pred             HHHHHHHHHHHhcccCH--HHHHHHHHHHHHHHHHH-HHhcCCCccccccccc-hhhhHHHHHHHHHcCcCHHHHHHHHH
Confidence            999999999998 4688  88888877666554443 3346776432211110 11122345677777787776555554


Q ss_pred             HHHhHHHHHHHhhhhhh-hccC---CchhhHHH-HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhh
Q psy10432        237 IYEGIMYTFIFVWTPVL-EVLS---PPLGLVFS-CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTS  311 (440)
Q Consensus       237 ~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~-~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (440)
                      +............+|++ +..+   .+.+.... ...++.+++.++.|++.|| +++++.+..+..+..+..+.......
T Consensus       233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~  311 (491)
T PRK11010        233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSI  311 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44444433334445554 3334   56777764 5557899999999999998 99888766655544444332211111


Q ss_pred             ccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchh
Q psy10432        312 SLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAI  391 (440)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  391 (440)
                      ... ...     .......+..++.|...+...+...+..|++.+++.+|+.+...++|..+++.+.   |.+.| ..||
T Consensus       312 ~~~-~~~-----~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~---G~l~~-~~G~  381 (491)
T PRK11010        312 TDK-NLY-----SMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVA---GWFVE-AHGW  381 (491)
T ss_pred             ccc-cHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhCh
Confidence            111 111     1222333334445666666778888888888999999999999999988887743   77778 7789


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        392 HSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +..|.+.+++.+.+.+.....++
T Consensus       382 ~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        382 PTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998888888777766654

>PRK09952 shikimate transporter; Provisional

Probab=99.97  E-value=5.9e-29  Score=236.26  Aligned_cols=347  Identities=15%  Similarity=0.085  Sum_probs=225.2

Q ss_pred             CCChhhHHH-----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH--------HHHHHHHH
Q psy10432         46 GYDEKNIAL-----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY--------ILLYGRLF  111 (440)
Q Consensus        46 g~s~~~~~~-----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~--------~l~~~r~l  111 (440)
                      +.++. .++     .+.++++...+.+++.|+++||+|||+++..+..+++++ .+++++++++        .+++.|++
T Consensus        56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l  134 (438)
T PRK09952         56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAI  134 (438)
T ss_pred             CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence            56655 344     234566555566678999999999999999999999998 7899999987        58889999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcccCchhhHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD--------ILNLGPIAPFAVAI  183 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------~~gw~~~~~~~~~~  183 (440)
                      +|++.+...|...+++.      |+.|+++|++..+..+.+..+|.++++.+...+..        .+||  |.+|++..
T Consensus       135 ~G~~~g~~~~~~~~~~~------e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gW--r~~f~~~~  206 (438)
T PRK09952        135 QGFAVGGEWGGAALLAV------ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGW--RIPFLFSI  206 (438)
T ss_pred             HHhhhcccHHHHHHHHH------HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccCh--HHHHHHHH
Confidence            99999999887766666      99999999999999999999999998887776653        3566  98988777


Q ss_pred             HHHHHHHHHHHHhccccCCCCCccCC-CCccchhhhhhhhccCcchHHHHHH-HHHHHhHHHHHHHhhhhhh--hccC--
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKTAKSS-LLPNSMFSSLKFLFTNPCLLTLGIV-QSIYEGIMYTFIFVWTPVL--EVLS--  257 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~--  257 (440)
                      +..++ .+......||+++..+++.+ ++.++.....+.++++|+.+..... ..+.....+.... +.|.+  +..+  
T Consensus       207 ~~~l~-~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~g~s  284 (438)
T PRK09952        207 VLVLI-ALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTA-FALNYSTQNLGLP  284 (438)
T ss_pred             HHHHH-HHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCC
Confidence            65543 33334455676532111100 0101111122345667776664432 3333344444433 44444  2333  


Q ss_pred             -CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        258 -PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       258 -~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                       ..........++..+++.++.|+++|| +++|+.+..+..+..++...+ ........ ...    .......+.+++.
T Consensus       285 ~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~----~~~~~~~l~~~~~  357 (438)
T PRK09952        285 RELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGTLSAFPF-FMALEAQS-IFW----IVFFSIMLANIAH  357 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHH-HHHHHcCC-hHH----HHHHHHHHHHHHH
Confidence             222233344556677888999999998 999988777765554433222 11111111 111    1223333445556


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhh-hhHHHHHHHHhhccccccCc-cchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPT-NFITCFTLIFIKNEDAEGGK-LIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      +...+..+++..|.+|++.|+++.|+.+... .+++.++|.+.   +.+.+. ..++...+...+++.+++.+..+..+
T Consensus       358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~---g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~  433 (438)
T PRK09952        358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIA---AALVTYFGGSWHSVAIYLLAGCLISAMTALLMK  433 (438)
T ss_pred             HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHH---HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence            6667778889999999999999999866554 47888899854   555441 22466777777777777666655443

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.97  E-value=1e-28  Score=232.25  Aligned_cols=328  Identities=12%  Similarity=0.103  Sum_probs=235.7

Q ss_pred             HHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHH
Q psy10432         28 TFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILL  106 (440)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~  106 (440)
                      ........|.+|.+.+++|.|+.+.+++.+.......+.+++.|+++||+|||+.+..+..+..++ .++.++++++.++
T Consensus        21 ~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~  100 (394)
T PRK11652         21 QMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLI  100 (394)
T ss_pred             HHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence            334566778888888999999999999877777777777789999999999999999999988888 6777889999999


Q ss_pred             HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432        107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL  186 (440)
Q Consensus       107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~  186 (440)
                      +.|++.|++.+...+.......      |.+++++++++++..+.+..++..++|.+++.+.+..||  |..|.+.....
T Consensus       101 ~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~--~~~f~~~~~~~  172 (394)
T PRK11652        101 AASAIQGLGTGVGGVMARTLPR------DLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW--RACYLFLLLLG  172 (394)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh--HHHHHHHHHHH
Confidence            9999999998877555444444      889999999999999999999999999999999998888  88887776655


Q ss_pred             HHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc-cC---Cchhh
Q psy10432        187 LGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV-LS---PPLGL  262 (440)
Q Consensus       187 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~g~  262 (440)
                      ++..+...+..||++++++++     ++.++.+++.++||+++...+...........+....++++++ .+   .+.++
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  247 (394)
T PRK11652        173 AGVTFSMARWMPETRPADARR-----TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSI  247 (394)
T ss_pred             HHHHHHHHHhCCccCccccch-----hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHH
Confidence            544454555667765432221     2245677788888988765554444444443333333334432 33   55677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhh-ccccchhhcchhHHHHHHHHHHHhhhchhh
Q psy10432        263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTS-SLFDSRRVLSTNLCFVAFLIYEISVGMYCP  341 (440)
Q Consensus       263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  341 (440)
                      ......++.++++.+.+++.|| .++  .............+.+..... .....+      .......+.+++.+...|
T Consensus       248 ~~~~~~~~~~~g~~~~~~l~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~  318 (394)
T PRK11652        248 LFILPIPAAFFGAWFAGRPNKR-FST--LMWQSVICCLLAGLLMWIPGWFGVMNVW------TLLVPAALFFFGAGMLFP  318 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHhccccHH------HHHHHHHHHHHHHHHHHH
Confidence            7777888888999999999997 662  222232222222222211110 111111      234444556667777888


Q ss_pred             hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ...+...+..| +++|+..++.+...++|..+++.+.
T Consensus       319 ~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~  354 (394)
T PRK11652        319 LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS  354 (394)
T ss_pred             HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888876 6789999999999999999999844

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.97  E-value=1.5e-29  Score=244.85  Aligned_cols=339  Identities=13%  Similarity=0.098  Sum_probs=252.6

Q ss_pred             HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432         25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY  103 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~  103 (440)
                      +.......+..+.+|.+.+++|.+.++.+++.+...+...+..|+.|+++||+|||+.++.+..+..++ .++++++|++
T Consensus        12 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~   91 (485)
T TIGR00711        12 FMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLE   91 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHH
Confidence            334444667788898888999999999999777777777777789999999999999999999999998 7888999999


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI  183 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~  183 (440)
                      .+++.|+++|++.+...+...+++.      |++|+++|++++++......+|..+||.+++++.++.+|  |+.|++..
T Consensus        92 ~l~~~~~~~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w--~~~f~~~~  163 (485)
T TIGR00711        92 LMIIFRVIQGFGGGPLIPLSFSTLL------NIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW--RWIFLINV  163 (485)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc--eehhhhhh
Confidence            9999999999999998887777777      999999999999999999999999999999999999899  77777766


Q ss_pred             HHHHHHHHHHHHhccccCCCCCccCC--------------------CCccch---------------------------h
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKTAKSS--------------------LLPNSM---------------------------F  216 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~~~~~--------------------~~~~~~---------------------------~  216 (440)
                      ...++..++..+..||++++++++.+                    .+..+.                           +
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (485)
T TIGR00711       164 PIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDD  243 (485)
T ss_pred             HHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            66555555555566665432211100                    000000                           0


Q ss_pred             hh--hhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCch
Q psy10432        217 SS--LKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPET  290 (440)
Q Consensus       217 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~  290 (440)
                      ++  ..+++++|.++...+..++.....+......+.++ +..+   .+.++......++.++++++.|++.|| +++|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~  322 (485)
T TIGR00711       244 NPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRK  322 (485)
T ss_pred             CCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHH
Confidence            00  12456778887776666666666555544334343 2223   678888889999999999999999997 99998


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhH
Q psy10432        291 MLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFI  370 (440)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g  370 (440)
                      .+..+..+..++...+ .....+.....     .......+.+++.+...+.......+..|+++++++.|+.+...++|
T Consensus       323 ~~~~g~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g  396 (485)
T TIGR00711       323 LVTIGLILYAVGFYWR-AFTFTPDTPFL-----AIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLG  396 (485)
T ss_pred             HHHHHHHHHHHHHHHH-hccCCCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHH
Confidence            8887777766665544 21112221221     13334445666677766666666667789999999999999999999


Q ss_pred             HHHHHHHh
Q psy10432        371 TCFTLIFI  378 (440)
Q Consensus       371 ~~~~~~~~  378 (440)
                      +.+++.+.
T Consensus       397 ~~ig~~i~  404 (485)
T TIGR00711       397 GSIGTALI  404 (485)
T ss_pred             HHHHHHHH
Confidence            99999855

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK10133 L-fucose transporter; Provisional

Probab=99.97  E-value=1.4e-28  Score=232.72  Aligned_cols=351  Identities=14%  Similarity=0.090  Sum_probs=243.6

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchhHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDFYIL  105 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~~~l  105 (440)
                      .+....+..|.+.+++|.|+++.++..+.......+.+++.|+++||+|||+++..+..+++++ .++   .++++++.+
T Consensus        41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~l  120 (438)
T PRK10133         41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF  120 (438)
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence            3666778888888999999999998666655555555679999999999999999999999998 443   568999999


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------------
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD----------------  169 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------------  169 (440)
                      +++|+++|+|.+...+..++++.      |..++++|.+.++..+....+|..+||.+++.+..                
T Consensus       121 l~~r~l~G~g~g~~~~~~~~~v~------~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~  194 (438)
T PRK10133        121 LVGLFIIAAGLGCLETAANPFVT------VLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTP  194 (438)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHH------HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccCh
Confidence            99999999999999887777766      88777777778999999999999999999876541                


Q ss_pred             --hccc------CchhhHHHHH-HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHh
Q psy10432        170 --ILNL------GPIAPFAVAI-PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEG  240 (440)
Q Consensus       170 --~~gw------~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (440)
                        ..+|      +||.+|+... +..++..+......||.+++++++  .+..+..+..++++++|.++...+..++...
T Consensus       195 ~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~  272 (438)
T PRK10133        195 EQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSD--AKQGSFSASLSRLARIRHWRWAVLAQFCYVG  272 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc--ccccchhhhHHHHHhCchHHHHHHHHHHHHH
Confidence              0123      1255665433 222222222233445432211111  1122233456778899998876666555555


Q ss_pred             HHHHHHHhhhhhh-h-ccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcccc
Q psy10432        241 IMYTFIFVWTPVL-E-VLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFD  315 (440)
Q Consensus       241 ~~~~~~~~~~~~~-~-~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (440)
                      ..+......++++ + ..+   .+.+..+....++.++++++.+++.|| +++++.+..+..+.....+.. .+.  +. 
T Consensus       273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~-~~~--~~-  347 (438)
T PRK10133        273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALCLIS-AFA--GG-  347 (438)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHH-HHc--CC-
Confidence            5554444334343 2 233   667889999999999999999999998 999998887766665544333 211  11 


Q ss_pred             chhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hhHH
Q psy10432        316 SRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IHSV  394 (440)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~  394 (440)
                       . .     ....+.+.+++.+..+|..++...+..|+ +.+++.++..+ ...++.++|.+.   |.+.| ..| .+..
T Consensus       348 -~-~-----~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~---G~l~~-~~g~~~~~  414 (438)
T PRK10133        348 -H-V-----GLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVM---GFVSD-AAGNIPTA  414 (438)
T ss_pred             -h-H-----HHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHH---HHHHH-hccchHHH
Confidence             1 1     23445567778999999999999998665 46677777754 446778888755   66667 565 6777


Q ss_pred             HHHHHHHHHHHH
Q psy10432        395 FVVCTACLLVAL  406 (440)
Q Consensus       395 ~~~~~~~~~~~~  406 (440)
                      |++...+.+...
T Consensus       415 ~~v~~~~~~~~~  426 (438)
T PRK10133        415 ELIPALCFAVIF  426 (438)
T ss_pred             HHHHHHHHHHHH
Confidence            776555444433

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.97  E-value=3.4e-30  Score=241.30  Aligned_cols=350  Identities=10%  Similarity=0.023  Sum_probs=244.0

Q ss_pred             HHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHH
Q psy10432         27 ATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYIL  105 (440)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l  105 (440)
                      ............|.+.+++|.|+++.+++.++......+..++.|+++||+|||+.++.+.++.+++ ++..++++++.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (379)
T TIGR00881         7 YYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVM   86 (379)
T ss_pred             HHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHH
Confidence            3334445667777788999999999999888888887777889999999999999999999999998 788889999999


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCchhhHHHHHH
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSG-FTAHFFADILNLGPIAPFAVAIP  184 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~gw~~~~~~~~~~~  184 (440)
                      ++.|++.|++.+...+...+++.      |++|+++|++++++.+....+|..++| .+++.+.+..+|  +..+++.+.
T Consensus        87 ~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~  158 (379)
T TIGR00881        87 AALWALNGIFQGMGWPPCGRTVT------KWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW--HWVFIVPGI  158 (379)
T ss_pred             HHHHHHHHhhccccCCchHHHHH------HhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCc--hhHHHHHHH
Confidence            99999999999999887777777      999999999999999999999999999 577777777788  777777766


Q ss_pred             HHHHHHHHHHHhccccCCCCCcc-------CC---------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432        185 FLLGSTLFIYFCWEEHYDPKTAK-------SS---------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV  248 (440)
Q Consensus       185 ~~~~~~~~~~~~~~e~~~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (440)
                      +.++..++..+..||++++++.+       ++         ++.+......+.++++|.++...+...+...........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (379)
T TIGR00881       159 IAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDW  238 (379)
T ss_pred             HHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            65555555555666654321100       00         000111223456778888888777766666665555443


Q ss_pred             hhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhH
Q psy10432        249 WTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNL  324 (440)
Q Consensus       249 ~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (440)
                      .++++ +..+   .+.+.......++.+++.++.+++.|| ..+++...............+......+.....     .
T Consensus       239 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  312 (379)
T TIGR00881       239 SPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDK-LFNGRRGPLAVFFMALIIVSLLVYWLNPAANPL-----M  312 (379)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHH-HcCCcchHHHHHHHHHHHHHHHHHhcCcchhHH-----H
Confidence            44444 3323   567888888999999999999999997 544333222222222211111111111111111     1


Q ss_pred             HHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHH
Q psy10432        325 CFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSV  394 (440)
Q Consensus       325 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  394 (440)
                      ........++..+...+.......|..|++.|+++.|+.+...+++..++|.+.   |.+.| ..|++..
T Consensus       313 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~  378 (379)
T TIGR00881       313 DLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL---GYLAD-GFGWAGA  378 (379)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH---HHHHH-hhccccc
Confidence            222222233223333445567788899999999999999999999999999854   66777 6666543

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.97  E-value=1.3e-28  Score=231.12  Aligned_cols=362  Identities=10%  Similarity=0.079  Sum_probs=236.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHH-HHhHHHHHh-hh
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICI-SYGIVYTLC-CL   95 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~-~~   95 (440)
                      ..++..++...+.++..|.++... +++|.|++++|++.+.....+.+.+++.|.++||+||||.++ .+.+..+++ .+
T Consensus        19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~   98 (393)
T PRK15011         19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTL   98 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence            344555666666677788886644 789999999999877666666666656555599999998754 555555565 56


Q ss_pred             hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhh--hHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432         96 TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL--NLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus        96 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                      .+++++++.+++.+.+.|...+...|...++..      |+.++++|  +...+..+.+.++|.++||++++.+.+++||
T Consensus        99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw  172 (393)
T PRK15011         99 FAWNRNYFVLLFVGVFLSSFGSTANPQMFALAR------EHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSF  172 (393)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH------HHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCh
Confidence            778889988876655555444555565555555      77766655  3445788999999999999999999999999


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCc-chHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432        174 GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNP-CLLTLGIVQSIYEGIMYTFIFVWTPV  252 (440)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (440)
                        |..|+..+...++..++.+..+||.+++++++++ +    .+.   ..+++ ..+...............+.. +.|.
T Consensus       173 --~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~  241 (393)
T PRK15011        173 --TVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG-T----LEA---PRRNRRDTLLLFVICTLMWGTNSLYII-NMPL  241 (393)
T ss_pred             --HHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc-c----ccc---cccccccHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence              8888888776666666666667876543222110 1    111   11232 233333333333333333323 4444


Q ss_pred             h--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        253 L--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       253 ~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      +  +..+   .+.+.......+..+++.++.|++.|| +++|+.+..+.....+..... ..   .+..+      ..+.
T Consensus       242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~---~~~~~------~~l~  310 (393)
T PRK15011        242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGM-LM---AHSPA------ILLG  310 (393)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHH-HH---HhhHH------HHHH
Confidence            3  3333   456777777777788899999999998 999987766554444332222 11   11111      1222


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+..++.|...+......+|..|+ ++|++.++.+...++|..++|.+.   |.+.| ..+++..|.+.+++.+++.+
T Consensus       311 ~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~---G~i~~-~~g~~~~~~~~~~~~~~~~~  385 (393)
T PRK15011        311 LQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLA---GIVAE-IWNYHAVFWFALVMIIATLF  385 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHH---HHHHH-HhhhHHHHHHHHHHHHHHHH
Confidence            22233334555555555667787774 599999999999999999999844   77777 77899999888877777766


Q ss_pred             HHHHhh
Q psy10432        408 ASCVFK  413 (440)
Q Consensus       408 ~~~~~~  413 (440)
                      ..+..+
T Consensus       386 ~~~~~~  391 (393)
T PRK15011        386 CLLRIK  391 (393)
T ss_pred             HHHhhc
Confidence            655443

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.97  E-value=7.9e-29  Score=231.62  Aligned_cols=356  Identities=11%  Similarity=0.027  Sum_probs=257.9

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhH-HHHHh--hhhcc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGI-VYTLC--CLTKF   98 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~-~~~~~--~~~~~   98 (440)
                      ..++....+..+..|++|.+.+|+|.|.+++|++.++......+.+|++|+++||+|||+....... ...+.  ..+..
T Consensus        11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~   90 (382)
T TIGR00902        11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAG   90 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            4445555566778999988889999999999999888888888888999999999998554322211 11122  23446


Q ss_pred             cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhh
Q psy10432         99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAP  178 (440)
Q Consensus        99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~  178 (440)
                      +++++.+++.|+++|.+.+...|..++...      ++  +++|++.+|......++|.++||++++.+.+++||  |..
T Consensus        91 ~~~~~~l~~~~~l~~~~~~~~~p~~~al~~------~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~--~~~  160 (382)
T TIGR00902        91 AHNAWLLFIAIGLFALFFSAGMPIGDALAN------TW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDE--QNI  160 (382)
T ss_pred             hhhHHHHHHHHHHHHHHHccchhHHHHHHH------HH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcCh--hHH
Confidence            789999999999999998887776666543      43  57889999999999999999999999999999999  666


Q ss_pred             HHHHHHHHHHHHHHHHHhcccc-CCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC
Q psy10432        179 FAVAIPFLLGSTLFIYFCWEEH-YDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS  257 (440)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (440)
                      |.+......+ .+... ..+|+ ++++++++  +.++..+..++++|||+++...+..++.......+....++++++.+
T Consensus       161 f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g  236 (382)
T TIGR00902       161 LAILTAGLAF-MLIGF-LIKPTIPPKDAIPE--DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAG  236 (382)
T ss_pred             HHHHHHHHHH-HHHHH-HcCCCCCCCccccc--cccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            6665444322 22222 33333 22211111  11112335678889999999888888777777776665555554444


Q ss_pred             ---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHH
Q psy10432        258 ---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEI  334 (440)
Q Consensus       258 ---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (440)
                         ...|..+....++.+++..+.+++.|| +++++.+..+.....+..... ..   .+..+      ..+....+.++
T Consensus       237 ~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~-~~---~~~~~------~~~~~q~l~g~  305 (382)
T TIGR00902       237 ISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAII-GA---IEAFP------LIFLLQILHCG  305 (382)
T ss_pred             CCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHH-Hh---HhhHH------HHHHHHHHHHH
Confidence               678888888889999999999999998 999999888888777766544 21   11111      23444556677


Q ss_pred             hhhchhhhHHhHhccCCcchhhHHHHHHhhh-hhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        335 SVGMYCPVTGYLRGRIIPEKARATITNWLRV-PTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       335 ~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      ..+...+....++++. |++++++..++++. ...+|..++|.  .+ |.+.| ..+. ..|...+++.+++.++
T Consensus       306 ~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~--~~-G~l~~-~~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       306 TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA--FA-GFIYP-TLGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hccH-HHHHHHHHHHHHHHHH
Confidence            7888888888888888 99999999999874 56788889998  45 88888 6775 6677777766655433

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.97  E-value=1.2e-28  Score=234.48  Aligned_cols=355  Identities=10%  Similarity=0.063  Sum_probs=237.3

Q ss_pred             hhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chhHHHHHHHHHHHH
Q psy10432         40 KVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDFYILLYGRLFGGI  114 (440)
Q Consensus        40 ~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~~~l~~~r~l~G~  114 (440)
                      +..+++|.|+++.++..++......+..++.|+++||+|||+.+..+.++.+++ .+....    ++++.+.+.|++.|+
T Consensus        51 p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~  130 (438)
T TIGR00712        51 PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW  130 (438)
T ss_pred             HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Confidence            334457999999999888888877777789999999999999999998888887 444443    567788899999999


Q ss_pred             HHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhcccCchhhHHHHHHHHHHHHHHH
Q psy10432        115 ATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA-DILNLGPIAPFAVAIPFLLGSTLFI  193 (440)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~~~~~~~~~~~~~~~~~~  193 (440)
                      +.+...+.....+.      |++|+++|++++++.+...++|..++|.+.+... +..+|  |..|++.+...++..+..
T Consensus       131 ~~g~~~~~~~~~i~------~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w--~~~f~~~~~~~~i~~~~~  202 (438)
T TIGR00712       131 FQGMGWPPCGRTMV------HWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW--HAALYFPAICAIIVALFA  202 (438)
T ss_pred             HhhcchHHHHHHHH------HhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHH
Confidence            99988776666666      9999999999999999999999999988776544 45688  888888777766655555


Q ss_pred             HHhccccCCCCC----c--cC-------CCCcc--chhhh-hhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh-cc
Q psy10432        194 YFCWEEHYDPKT----A--KS-------SLLPN--SMFSS-LKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE-VL  256 (440)
Q Consensus       194 ~~~~~e~~~~~~----~--~~-------~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  256 (440)
                      ++.+||++++.+    +  ++       ++.++  +.++. .+.+++|+.++...+...+.+...+......+++++ ..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~  282 (438)
T TIGR00712       203 FAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVK  282 (438)
T ss_pred             HHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHcc
Confidence            666676543210    0  00       00000  11111 124678888888777766666665655554444443 23


Q ss_pred             C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432        257 S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE  333 (440)
Q Consensus       257 ~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (440)
                      +   .+.++......++.++++++.|++.|| +++++....+.............+...+.....     .........+
T Consensus       283 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g  356 (438)
T TIGR00712       283 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPL-----VDMICMIVIG  356 (438)
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHHHHHHHHHHhcCCCchH-----HHHHHHHHHH
Confidence            3   557788888889999999999999998 865443333332222221111111111111111     1111111111


Q ss_pred             Hhhhchhh--hHHhHhccCCcchhhHHHHHHhhhhhhhHH-HHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        334 ISVGMYCP--VTGYLRGRIIPEKARATITNWLRVPTNFIT-CFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       334 ~~~g~~~~--~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                        .+...+  .......|..|++.||++.|+.+...+.++ .++|.+.   |.+.| ..+++..+.++.+..+++.+..+
T Consensus       357 --~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~---G~l~~-~~g~~~~~~~~~~~~~~~~~~~~  430 (438)
T TIGR00712       357 --FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV---GYTVD-FFGWDGGFMVMIGGSILAVILLI  430 (438)
T ss_pred             --HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH---HHHHH-hccchHHHHHHHHHHHHHHHHHH
Confidence              222222  223456788899999999999999888875 6788844   77777 77889999888777777666655


Q ss_pred             Hhhh
Q psy10432        411 VFKR  414 (440)
Q Consensus       411 ~~~~  414 (440)
                      ...+
T Consensus       431 ~~~~  434 (438)
T TIGR00712       431 VVMI  434 (438)
T ss_pred             HHHh
Confidence            5444

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.97  E-value=9.5e-29  Score=239.80  Aligned_cols=350  Identities=13%  Similarity=0.117  Sum_probs=232.2

Q ss_pred             HHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHH
Q psy10432         28 TFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILL  106 (440)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~  106 (440)
                      .+......+..|.+.+++|.|+.+.++..+.......+..++.|+++||+|||+.++.+.++.+++ .+..+++|++.++
T Consensus        33 ~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~  112 (496)
T PRK03893         33 GFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLF  112 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            334556677788888999999999998777777666666689999999999999999999998888 6788889999999


Q ss_pred             HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432        107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL  186 (440)
Q Consensus       107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~  186 (440)
                      +.|++.|++.+...+...+++.      |.+|+++|++++++...+.++|..++|.+++.+.+..+|  |+.|.+.....
T Consensus       113 ~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w--~~~f~~~~~~~  184 (496)
T PRK03893        113 IARLVIGMGMAGEYGSSATYVI------ESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW--RALFFIGILPI  184 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH------HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH--HHHHHHHHHHH
Confidence            9999999999988777777777      999999999999999999999999999999999998899  77776654433


Q ss_pred             HHHHHHHHHhccccCCCCCccCC-CCccchhhhhhhhcc-Ccch------------------------HH----------
Q psy10432        187 LGSTLFIYFCWEEHYDPKTAKSS-LLPNSMFSSLKFLFT-NPCL------------------------LT----------  230 (440)
Q Consensus       187 ~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~------------------------~~----------  230 (440)
                      .+ .++.....||+++.++++++ ...++..+   ...+ +++.                        +.          
T Consensus       185 ~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (496)
T PRK03893        185 IF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVD---ILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAA  260 (496)
T ss_pred             HH-HHHHHHhCCCchhhhhhccccccchhHHH---HHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Confidence            32 23333445664321111100 01011000   0000 0000                        00          


Q ss_pred             -------------------HHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccC
Q psy10432        231 -------------------LGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFK  287 (440)
Q Consensus       231 -------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~  287 (440)
                                         ............+......++++ +..+   .+.+...+...++.++++++.|++.|| ++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g  339 (496)
T PRK03893        261 IFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LG  339 (496)
T ss_pred             HHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence                               00000000000000112223333 2333   677888999999999999999999997 99


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhh
Q psy10432        288 PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT  367 (440)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~  367 (440)
                      +++.+..+..+..+..+.+ ....  .... .    .......+.+.......+....++++..|+++||+++|+.+...
T Consensus       340 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  411 (496)
T PRK03893        340 TRKAYVCSLLISQLLIIPV-FAIG--GANV-W----VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVG  411 (496)
T ss_pred             chHHHHHHHHHHHHHHHHH-hhcc--ccHH-H----HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhh
Confidence            9988776665554443322 1111  1111 1    11111111111122234556677889999999999999999999


Q ss_pred             hhHHHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432        368 NFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL  402 (440)
Q Consensus       368 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (440)
                      ++|..++|.+.   |.+.| ..+++..+...+...
T Consensus       412 ~~g~~lgp~l~---g~l~~-~~g~~~~~~~~~~~~  442 (496)
T PRK03893        412 ALGGALAPILG---ALIAQ-RLDLGTALASLSFSL  442 (496)
T ss_pred             hHHHHHHHHHH---HHHhc-cCChHHHHHHHHHHH
Confidence            99999999844   77778 778877775554433

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.97  E-value=1.3e-28  Score=237.85  Aligned_cols=362  Identities=13%  Similarity=0.074  Sum_probs=231.1

Q ss_pred             hhhhhHhhhHhhc--------CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----
Q psy10432         33 IQGPYVYKVYKDY--------GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----   99 (440)
Q Consensus        33 ~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----   99 (440)
                      ..++..+.+.+++        +.++++.+++.+...+...+.++++|+++||+|||++++.+..+..++ .+++++    
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~  109 (479)
T PRK10077         30 VISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGF  109 (479)
T ss_pred             eehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            3445555555544        888899888766666666666679999999999999999999988887 544432    


Q ss_pred             --------chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH---
Q psy10432        100 --------SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA---  168 (440)
Q Consensus       100 --------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---  168 (440)
                              ++++.++++|+++|++.|...+...+++.      |++|+++|++++++.+.+..+|.++++.+++.+.   
T Consensus       110 ~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~------e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~  183 (479)
T PRK10077        110 TSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIA------EIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSG  183 (479)
T ss_pred             ccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHH------hhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence                    23567889999999999999887777777      9999999999999999999999999988876654   


Q ss_pred             -----hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCC---CccCC-----------CCccchhhhhhhhcc-----
Q psy10432        169 -----DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPK---TAKSS-----------LLPNSMFSSLKFLFT-----  224 (440)
Q Consensus       169 -----~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~-----------~~~~~~~~~~~~~~~-----  224 (440)
                           +..||  |+.|++.....++..+ ..+++||+++..   +++++           .+.+...+..+...+     
T Consensus       184 ~~~~~~~~gW--r~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (479)
T PRK10077        184 DASWLNTDGW--RYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKT  260 (479)
T ss_pred             cccccccCCh--HHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhh
Confidence                 23567  8888877666655443 355678876421   00000           000000111111111     


Q ss_pred             CcchHHH---HHHHHHH------HhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q psy10432        225 NPCLLTL---GIVQSIY------EGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETM  291 (440)
Q Consensus       225 ~~~~~~~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~  291 (440)
                      .+..+..   .....+.      ....+.. .++.|.+ +..+   ....+.....++..+++.++.+++.|| +++|+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~  338 (479)
T PRK10077        261 GGKLLMFGVGVIVIGVMLSVFQQFVGINVV-LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPL  338 (479)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHhChhHH-HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHH
Confidence            1111111   0000000      0011111 1233433 3333   334556667778889999999999998 999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhH
Q psy10432        292 LTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFI  370 (440)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g  370 (440)
                      +..+..+.+++.+.+ ............     ......++.++.+. ..|..+.++.|..|+++|+++.|+.+...+++
T Consensus       339 ~i~~~~~~~v~~~~l-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g  412 (479)
T PRK10077        339 QIIGALGMAIGMFSL-GTAFYTQAPGIV-----ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIA  412 (479)
T ss_pred             HHHhHHHHHHHHHHH-HHHHhcCcccHH-----HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHH
Confidence            988888777776555 222111111111     22222333333333 34778899999999999999999999999999


Q ss_pred             HHHHHHHhhc---cccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        371 TCFTLIFIKN---EDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       371 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ..+++..+..   .+...+ ..++...|.+.++..+++.++.+..
T Consensus       413 ~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  456 (479)
T PRK10077        413 NYFVSWTFPMMDKNSWLVA-HFHNGFSYWIYGCMGVLAALFMWKF  456 (479)
T ss_pred             HHHHHHHhHHHHhccchhh-hccCccHHHHHHHHHHHHHHHHHhc
Confidence            9888654321   123344 5566777777776666665554443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.97  E-value=1.2e-28  Score=236.74  Aligned_cols=350  Identities=11%  Similarity=-0.010  Sum_probs=239.1

Q ss_pred             hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc--ccchhHHHHHHHHHHHHHHhhhc
Q psy10432         44 DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK--FSSDFYILLYGRLFGGIATSILF  120 (440)
Q Consensus        44 ~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~--~~~~~~~l~~~r~l~G~~~~~~~  120 (440)
                      |++++..+.|.+.+.......+.+++.|+++||+|||+++..+.++.+++ .++.  ...+++.+++.|+++|++.+...
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~  149 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS  149 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence            78899999988666665555555679999999999999999999888887 5443  34668889999999999999998


Q ss_pred             cccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432        121 SGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-LNLGPIAPFAVAIPFLLGSTLFIYFCWEE  199 (440)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~e  199 (440)
                      |....++.      |++|+++|++++++...+..+|.+++|++++.+.+. .||  |..|++.++..++..++.+...+|
T Consensus       150 ~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw--~~~f~i~~~~~~~~~~~~~~~~~~  221 (465)
T TIGR00894       150 PATHKIIV------KWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGW--PMIFYVFGIVGCAWSLLWFVFPAD  221 (465)
T ss_pred             hhHHHHHH------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--CeehhhhhHHHHHHHHHHHHHhcC
Confidence            87777777      999999999999999999999999999999999988 499  878877776665555544555555


Q ss_pred             cCCCCCccCC-------------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cchhh
Q psy10432        200 HYDPKTAKSS-------------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGL  262 (440)
Q Consensus       200 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~  262 (440)
                      +|+++++.++             ....+.+.++++++++|.++...+..+..+...+.+....+.++ +..+   .+.++
T Consensus       222 ~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~  301 (465)
T TIGR00894       222 DPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGL  301 (465)
T ss_pred             CcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHH
Confidence            5432211100             00011123477888999999888887777777766655334444 3223   56788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCchhH----H--HHHHHHHHH-HHHHHHhhhccccchhhcchhHHHHHHHHHHHh
Q psy10432        263 VFSCFMISIMIGSKIYSILILKYFKPETML----T--LTVYLATFS-ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEIS  335 (440)
Q Consensus       263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (440)
                      ..+...++.+++.++.|++.|| .++++..    .  ......... ....+.........+      ..+..+.+..++
T Consensus       302 ~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~  374 (465)
T TIGR00894       302 LSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY------LTIIILTLANAV  374 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH------HHHHHHHHHHHH
Confidence            8888899999999999999997 5433211    0  111111111 111101111111111      122233333334


Q ss_pred             hhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCc--cchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        336 VGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGK--LIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       336 ~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      .+...+.......+..| +.+|.+.|+.+....++..++|.+.   +.+.+.  ..++...|.+.++..+++.++....
T Consensus       375 ~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~---g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~  449 (465)
T TIGR00894       375 SSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLA---GNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF  449 (465)
T ss_pred             hhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhh---heeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence            44444555555566655 4899999999999999999999855   555441  2457888888888777776665443

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.97  E-value=1e-28  Score=215.82  Aligned_cols=294  Identities=47%  Similarity=0.915  Sum_probs=249.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHh
Q psy10432          8 KTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYG   87 (440)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~   87 (440)
                      .+++..++++++++.++.+...+||+.+|+++.+|+++|.+..|++.+|..|+..+.+++++.|.++||+|||+..+..+
T Consensus        27 ~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~c  106 (354)
T PF05631_consen   27 STNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFC  106 (354)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHH
Q psy10432         88 IVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHF  166 (440)
Q Consensus        88 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~  166 (440)
                      +++++++++-..++++.++++|++.|++.+..+++..+|+..++ .++-+|+|..+..++... ..+++-.+.+.+++.+
T Consensus       107 ily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh-~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~  185 (354)
T PF05631_consen  107 ILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEH-NKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANV  185 (354)
T ss_pred             HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHH
Confidence            99999988888999999999999999999999999999999776 344567777888887776 5566777888888889


Q ss_pred             HHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432        167 FADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI  246 (440)
Q Consensus       167 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (440)
                      +.+..+.+...||........+..+++...++|+..+.+++. ...++..+.++.+++||+++.+.+.+.++.+.+|.+.
T Consensus       186 l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~-~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FV  264 (354)
T PF05631_consen  186 LADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSS-SLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFV  264 (354)
T ss_pred             HHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCccccc-chHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhe
Confidence            888877766899999999998888888888899876533322 1345567778889999999999999999999999999


Q ss_pred             Hhhhhhhhcc--CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432        247 FVWTPVLEVL--SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI  303 (440)
Q Consensus       247 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~  303 (440)
                      ..|.|.++..  +...|++++.+.++.++|+.+..++..|+.+.+..+........+++
T Consensus       265 flWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l  323 (354)
T PF05631_consen  265 FLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSL  323 (354)
T ss_pred             eeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            9999999643  37789999999999999999998877653455555555444444443

>TIGR00898 2A0119 cation transport protein

Probab=99.97  E-value=6e-29  Score=241.58  Aligned_cols=352  Identities=13%  Similarity=0.054  Sum_probs=247.4

Q ss_pred             hhHhhhHhhcCCC---hhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432         36 PYVYKVYKDYGYD---EKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF  111 (440)
Q Consensus        36 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l  111 (440)
                      +..+.+.+|+|++   +.+.++..++..+...+.+++.|+++||+|||++++.+.++.+++ .+.++++|++.+++.|++
T Consensus       110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l  189 (505)
T TIGR00898       110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL  189 (505)
T ss_pred             cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence            4566777999998   888888666666666666679999999999999999999999888 688899999999999999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      .|++.+...+...+++.      |++|+++|+++.++...+..+|.+++|.++..+.+   |  |+.+++..+..++..+
T Consensus       190 ~G~~~~~~~~~~~~~~~------e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---w--r~~~~~~~i~~~~~~~  258 (505)
T TIGR00898       190 VGMGIGGIWVQAVVLNT------EFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---W--RWLQLAVSLPTFLFFL  258 (505)
T ss_pred             HHhhccchHHHHHHHhh------eecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---H--HHHHHHHHHHHHHHHH
Confidence            99999998777777777      99999999999999999999999999998877654   6  8888777766655544


Q ss_pred             HHHHhccccCCC----CCcc--------------C-----------CCC--ccchhhhhhhhccCcchHHHHHHHHHHHh
Q psy10432        192 FIYFCWEEHYDP----KTAK--------------S-----------SLL--PNSMFSSLKFLFTNPCLLTLGIVQSIYEG  240 (440)
Q Consensus       192 ~~~~~~~e~~~~----~~~~--------------~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (440)
                      . .+.+||+++.    .+.+              .           +++  .+.....+++++++|.++...+...+.+.
T Consensus       259 ~-~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  337 (505)
T TIGR00898       259 L-SWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF  337 (505)
T ss_pred             H-HHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence            4 3567887541    0000              0           000  00001245677888888775555444433


Q ss_pred             HHHHHHHhhhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhc
Q psy10432        241 IMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVL  320 (440)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (440)
                      .............+..+..........++..+++.++.+++.|| ++||+.+..+....+++.+.+ ....... .+   
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~-~~~~~~~-~~---  411 (505)
T TIGR00898       338 TTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLL-LFVPVDL-YF---  411 (505)
T ss_pred             HHHHHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHH-HHcCCCc-hH---
Confidence            33222111111113333334455556678888999999999997 999999888887777766544 2211111 11   


Q ss_pred             chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHH
Q psy10432        321 STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTA  400 (440)
Q Consensus       321 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (440)
                         .......+..++.+..++..+.+..|..|++.|+++.|+.++...+|+.++|.+.   +  .+ ..+....+.+.++
T Consensus       412 ---~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~---~--~~-~~~~~~~~~~~~~  482 (505)
T TIGR00898       412 ---LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLV---Y--LG-EKWLFLPLVLFGG  482 (505)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHH---H--HH-HHHHhhHHHHHHH
Confidence               1223333444455566778888999999999999999999999999999999854   3  23 3345566777777


Q ss_pred             HHHHHHHHHHHhhh
Q psy10432        401 CLLVALLASCVFKR  414 (440)
Q Consensus       401 ~~~~~~~~~~~~~~  414 (440)
                      +.+++.+....+++
T Consensus       483 ~~~~~~~~~~~lpe  496 (505)
T TIGR00898       483 LALLAGILTLFLPE  496 (505)
T ss_pred             HHHHHHHHHHcCcC
Confidence            66666666555544

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.97  E-value=3.7e-29  Score=241.92  Aligned_cols=364  Identities=14%  Similarity=0.104  Sum_probs=238.3

Q ss_pred             HHhhhhhHhhhHhhcCCC--------hhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc---
Q psy10432         31 DWIQGPYVYKVYKDYGYD--------EKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF---   98 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s--------~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~---   98 (440)
                      .....+..+.+.++++.+        ..+.+++.++..+...+.++++|+++||+|||++++.+.++..++ +++.+   
T Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~  123 (481)
T TIGR00879        44 TGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF  123 (481)
T ss_pred             cchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            334555666666666655        788898888888888888889999999999999999999998887 55533   


Q ss_pred             cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH---HHHHhhcccCc
Q psy10432         99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTA---HFFADILNLGP  175 (440)
Q Consensus        99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~~~~gw~~  175 (440)
                      ..+++.+++.|+++|++.+...+...+++.      |++|+++|++++++.+.+..+|..+++.++   ....+..+|  
T Consensus       124 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w--  195 (481)
T TIGR00879       124 ALSVEMLIVGRVLLGIGVGIASALVPMYLS------EIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGW--  195 (481)
T ss_pred             ccchHHHHHHHHHHHhhhhHHHhHHHHHHH------ccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccH--
Confidence            345668999999999999999776666666      999999999999999999999999999999   666666788  


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCCC----CCccC-----------CCCccchh------------------hhhhhh
Q psy10432        176 IAPFAVAIPFLLGSTLFIYFCWEEHYDP----KTAKS-----------SLLPNSMF------------------SSLKFL  222 (440)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~-----------~~~~~~~~------------------~~~~~~  222 (440)
                      |+.|.+.....++. ++..+++||+++.    ++.++           +.+.....                  ..++..
T Consensus       196 ~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (481)
T TIGR00879       196 RIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSL  274 (481)
T ss_pred             HHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence            88887755544433 3344566776421    00000           00000000                  001112


Q ss_pred             ccC-----cchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH
Q psy10432        223 FTN-----PCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT  293 (440)
Q Consensus       223 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~  293 (440)
                      ++.     +..+.......+...........+.|.+ +..+   ...+.......++.+++.++.+++.|| +++|+.+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~  353 (481)
T TIGR00879       275 FSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLL  353 (481)
T ss_pred             HhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHH
Confidence            221     1111111111121111111112344444 4333   445777788888999999999999997 99999888


Q ss_pred             HHHHHHHHHHHHHHHh--hhcccc--chhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhh
Q psy10432        294 LTVYLATFSITVSTVL--TSSLFD--SRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTN  368 (440)
Q Consensus       294 ~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  368 (440)
                      .+..+..++.+.+...  ......  ....    ..+....++..+.+. ..+....+..|..|++.|+++.|+.+...+
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  429 (481)
T TIGR00879       354 IGAAGMAICLFVLGILGASFVTGSSKSSGN----VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANW  429 (481)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCcccchhH----HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHH
Confidence            8777666665444211  111110  0011    112222222223333 345666777999999999999999999999


Q ss_pred             hHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        369 FITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       369 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ++..++|.+.   +...+ ..++...|.+.+++.+++.+.....
T Consensus       430 lg~~i~~~~~---~~~~~-~~~~~~~f~~~~~~~~~~~i~~~~~  469 (481)
T TIGR00879       430 LANFIVGFLF---PTMLE-SIGVGGVFIFFGGLNVLGLIFVYFF  469 (481)
T ss_pred             HHHHHHHHHH---HHHHH-hcCccceehhHHHHHHHHHHHHhee
Confidence            9999999855   55556 5677888888877777766655443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00895 2A0115 benzoate transport

Probab=99.97  E-value=4.2e-28  Score=228.78  Aligned_cols=327  Identities=19%  Similarity=0.184  Sum_probs=230.6

Q ss_pred             HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432         32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL  110 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~  110 (440)
                      ....+..|.+.+++|.++.+.+++.........+..++.|+++||+|||+.+..+..+..++ .+..++++++.+++.|+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (398)
T TIGR00895        34 AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRF  113 (398)
T ss_pred             HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence            34556677777999999999999887777777777789999999999999999999888888 67778899999999999


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      +.|++.+...+...+++.      |++|+++|++++++......+|..++|.+++.+.+..||  +..+.+.+....+..
T Consensus       114 ~~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~--~~~~~~~~~~~~~~~  185 (398)
T TIGR00895       114 LAGLGLGGLMPNLNALVS------EYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW--RSLFYVGGIAPLLLL  185 (398)
T ss_pred             HHhcccccchhhHHHHHH------HHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc--eeehhhhhhHHHHHH
Confidence            999999998887777777      999999999999999999999999999999999998899  767766654444444


Q ss_pred             HHHHHhccccCCCCCcc-------------------------CC-CCccchhhhhhhhccCc---chHHHHHHHHHHHhH
Q psy10432        191 LFIYFCWEEHYDPKTAK-------------------------SS-LLPNSMFSSLKFLFTNP---CLLTLGIVQSIYEGI  241 (440)
Q Consensus       191 ~~~~~~~~e~~~~~~~~-------------------------~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  241 (440)
                      ++....+||+++...++                         ++ .+.+..++..+.+++++   ..+.......+....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (398)
T TIGR00895       186 LLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVG  265 (398)
T ss_pred             HHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence            55555667654310000                         00 00011111222233322   222223333333333


Q ss_pred             HHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccch
Q psy10432        242 MYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSR  317 (440)
Q Consensus       242 ~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (440)
                      .+.. ..+.|.+ +..+   .+.+.......++.+++.++.+++.|| +++++... ......+....+..  . ....+
T Consensus       266 ~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~--~-~~~~~  339 (398)
T TIGR00895       266 VYFL-TNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTAL-LLLLGAVFAVLVGS--T-LFSPT  339 (398)
T ss_pred             HHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHH-HHHHHHHHHHHHHH--H-hhCHH
Confidence            3333 2344444 3333   567888888999999999999999997 98874333 33333332222211  1 11111


Q ss_pred             hhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        318 RVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                            .......+.+++.+...+...+...+..|+++|+++.|+.+...+++..++|.+.
T Consensus       340 ------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~  394 (398)
T TIGR00895       340 ------LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA  394 (398)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence                  2344445566677778888899999999999999999999999999999999844

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.97  E-value=5.2e-28  Score=224.08  Aligned_cols=335  Identities=20%  Similarity=0.260  Sum_probs=268.2

Q ss_pred             HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432         25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY  103 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~  103 (440)
                      +..........+..+.+.+++|.++.+.++..........+.+|+.|+++||+|||+.+..+..+..++ ....+.++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~   88 (352)
T cd06174           9 FLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLW   88 (352)
T ss_pred             HHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHH
Confidence            344445666778887888999999999999888888888888899999999999999999999999998 6777789999


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI  183 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~  183 (440)
                      .+++.|++.|++.+...+...+++.      |++|+|+|++.+++.+...++|..++|.+++.+.+..+|  +..+.+..
T Consensus        89 ~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~  160 (352)
T cd06174          89 LLLVGRFLLGLGGGALYPAAAALIA------EWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW--RWLFLILA  160 (352)
T ss_pred             HHHHHHHHHHcccccccHhHHHHHH------HhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHH
Confidence            9999999999999999887777777      999999999999999999999999999999999999888  77777777


Q ss_pred             HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc----cCCc
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV----LSPP  259 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  259 (440)
                      ...++..+...+ .+                           |+++...+...+.......+....+++.++    ...+
T Consensus       161 ~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (352)
T cd06174         161 ILGLLLALLLLF-LL---------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE  212 (352)
T ss_pred             HHHHHHHHHHHH-HH---------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence            666555444332 23                           345555555555556555554544544432    2267


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCch-hHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPET-MLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM  338 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  338 (440)
                      .+.......++.+++.++.+++.|| .++|+ .+..+.....++.... ....  +  . .    .......+.+++.+.
T Consensus       213 ~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~-~~~~--~--~-~----~~~~~~~~~g~~~~~  281 (352)
T cd06174         213 AGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLL-ALAP--S--L-A----LLLVALLLLGFGLGF  281 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHH-HHhc--c--H-H----HHHHHHHHHHHHHhc
Confidence            7888999999999999999999997 99998 7777777776666554 2111  1  1 1    345555667777888


Q ss_pred             hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        339 YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       339 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      ..+.......|..|+++|++.+|+.+...+++..+++.+.   +...+ ..+++..+.+.+++.+++.+...
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~---g~l~~-~~~~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         282 AFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA---GLLLD-TGGYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             cchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhc-ccCcchHHHHHHHHHHHHHHHhe
Confidence            8999999999999999999999999999999999999954   66777 77889999998888877766543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.97  E-value=1.8e-27  Score=224.10  Aligned_cols=366  Identities=14%  Similarity=0.088  Sum_probs=244.3

Q ss_pred             HHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-----chhH-HHHHHhHHHHHh-h
Q psy10432         22 IPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-----GRKL-ICISYGIVYTLC-C   94 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~~~-~   94 (440)
                      .+++............+|...++.|.|.+++|++..+...  .+..|++|+++||+     |||| .++.+..+.+++ .
T Consensus         6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~   83 (402)
T PRK11902          6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA   83 (402)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence            3344444445667778878889999999999997666665  36668999999999     8876 677777777766 4


Q ss_pred             hhccc---chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Q psy10432         95 LTKFS---SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-  170 (440)
Q Consensus        95 ~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-  170 (440)
                      +.++.   ++++.+++..++.++..+...++.++++.      |+.|+|||+++.++...+.++|.++++.+++.+.+. 
T Consensus        84 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~  157 (402)
T PRK11902         84 AMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYST------DVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV  157 (402)
T ss_pred             HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence            44444   45777888888888888888887777777      999999999999999999999999999999999885 


Q ss_pred             cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhh
Q psy10432        171 LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWT  250 (440)
Q Consensus       171 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (440)
                      .||  |..|++.+...++..+ ..+..||+++++++++ ...++..+++++++|||.++...+...+............+
T Consensus       158 ~gw--~~~f~i~a~~~l~~~l-~~~~~~e~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~  233 (402)
T PRK11902        158 LGW--GNTYLLMAGLMLAGAL-TTLWAPEPEVPARPPR-SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLST  233 (402)
T ss_pred             cCH--HHHHHHHHHHHHHHHH-HHHhcCCCcccccccc-hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHH
Confidence            488  8888877766554433 3445677654322211 11223456788899999988766665555443332222234


Q ss_pred             hhh-hccC---CchhhHHHHHH-HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        251 PVL-EVLS---PPLGLVFSCFM-ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       251 ~~~-~~~~---~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      +++ +..+   .+.++.....+ ++.+++..+.+++.|| +++++.+..+.....+..+.+......++..+      ..
T Consensus       234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~------~~  306 (402)
T PRK11902        234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLW------TM  306 (402)
T ss_pred             HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH------HH
Confidence            444 3333   55666665544 4688999999999997 99888876666555544433312111111112      12


Q ss_pred             HHHHH----HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432        326 FVAFL----IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC  401 (440)
Q Consensus       326 ~~~~~----~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (440)
                      .....    ..++..+...+....++++..|.++++    ..+...+++...++.  .+ |.+.| ..|++..|...+++
T Consensus       307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~--~~-G~l~~-~~G~~~~f~~~~~~  378 (402)
T PRK11902        307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGP--TS-GYLVE-AYGWPGFYLMTVVI  378 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHH--HH-HHHHH-HhChHHHHHHHHHH
Confidence            22222    223334445666677777777766554    444444555554444  24 66778 88999999998888


Q ss_pred             HHHHHHHHHHhhh
Q psy10432        402 LLVALLASCVFKR  414 (440)
Q Consensus       402 ~~~~~~~~~~~~~  414 (440)
                      .+++.++.+..++
T Consensus       379 ~~~~~~~~~~~~~  391 (402)
T PRK11902        379 ALPGLALLWLMRG  391 (402)
T ss_pred             HHHHHHHHHHHhh
Confidence            8777666544443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.97  E-value=3.4e-27  Score=220.68  Aligned_cols=352  Identities=10%  Similarity=0.063  Sum_probs=245.4

Q ss_pred             HHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchh----HHHHHHhHHHHHhhhhccc
Q psy10432         24 FFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRK----LICISYGIVYTLCCLTKFS   99 (440)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr----~~l~~~~~~~~~~~~~~~~   99 (440)
                      ++....+.++..|++|...+|+|.|.+++|+..++..+...+.+|++|+++||+|||    +.+.+......+ .....+
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~   91 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AFWFGA   91 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHhc
Confidence            444445567789999888899999999999998888888888889999999999984    333222221111 234456


Q ss_pred             chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhH
Q psy10432        100 SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPF  179 (440)
Q Consensus       100 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~  179 (440)
                      ++++.+++.|++.|++.+...|...+...      ++  +++|+++++......++|..+||++++++.+++||  |..|
T Consensus        92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~------~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~--~~~f  161 (382)
T PRK11128         92 HSFWLLFVAIGLFNLFFSPLVPLTDALAN------TW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGE--QAIL  161 (382)
T ss_pred             ccHHHHHHHHHHHHHHHcccccHHHHHHH------HH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcCh--hHHH
Confidence            88999999999999999888786665554      55  46788899999999999999999999999999999  7777


Q ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC--
Q psy10432        180 AVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS--  257 (440)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  257 (440)
                      +..+...++..+ ..+..||+++++++++  +.++..+++++++|+|+++...+..++............+++.++.+  
T Consensus       162 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s  238 (382)
T PRK11128        162 WILTAGVASMLL-GQLLRPTIMPQGESRQ--QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYS  238 (382)
T ss_pred             HHHHHHHHHHHH-HHHccCCCCCcccccc--ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCC
Confidence            766654443333 2334455432221111  11122346788999999988777666665555444444455544343  


Q ss_pred             -CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        258 -PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       258 -~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                       .+.|...+...++.++...+.+++.|| +++++.+..+.....+..+.+ ..   .+..+      .......+.+++.
T Consensus       239 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~-~~---~~~~~------~~~~~~~l~g~~~  307 (382)
T PRK11128        239 ASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLM-GS---TTALP------WLIVIQILHCGTF  307 (382)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHH-Hh---hhhHH------HHHHHHHHHHHHH
Confidence             567888888888999999999999997 999998888777766655433 21   11112      2344455666677


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhh-hhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLR-VPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL  406 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (440)
                      +...+....+.++. +++++++..+..+ .....|..++|.  .+ |.+.| ..+. ..+...+++.+.+.
T Consensus       308 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~--i~-G~l~~-~~g~-~~~~~~~~~~~~~~  372 (382)
T PRK11128        308 TVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTV--LS-GFLYQ-HLGA-GVFWVMALVALPAL  372 (382)
T ss_pred             HHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hccH-HHHHHHHHHHHHHH
Confidence            77788888888776 5666788899886 445567788888  34 77777 6665 45555555554443

>TIGR00889 2A0110 nucleoside transporter

Probab=99.97  E-value=1.2e-27  Score=225.40  Aligned_cols=373  Identities=10%  Similarity=0.027  Sum_probs=245.2

Q ss_pred             HHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccch-hHHHHHHhHHHHHh-hhhcc
Q psy10432         22 IPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGR-KLICISYGIVYTLC-CLTKF   98 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~-~~~~~   98 (440)
                      ...+..+.+..+..|.++... +++|.|.+++|++.++..+...+.+|++|+++||+|| |+++.++.++.+++ .+..+
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~   88 (418)
T TIGR00889         9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ   88 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence            334444444445656554544 6799999999999888888888888999999999965 77888887777776 56778


Q ss_pred             cchhHHHHHHHHHHHHHHhhhccccchhhhccc--cccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q psy10432         99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEH--LNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPI  176 (440)
Q Consensus        99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~  176 (440)
                      .++++.+++.|++.|++.+...+..+++.....  .-.|......|.+..|      .+|.++||.+++.+....+|   
T Consensus        89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~---  159 (418)
T TIGR00889        89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN---  159 (418)
T ss_pred             hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh---
Confidence            889999999999999988777666555432110  0002223334445544      47888899988887333234   


Q ss_pred             hhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhcc
Q psy10432        177 APFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL  256 (440)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (440)
                      .+|++.++..++..+ ..+.+||+++++++++....+....+.+.++|+|+++...+..++............+++.++.
T Consensus       160 ~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (418)
T TIGR00889       160 IQLYITAGSSALLGV-FALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF  238 (418)
T ss_pred             HHHHHHHHHHHHHHH-HHhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh
Confidence            345555555444443 3456787653322221111111112345678899988776666665544433333334444332


Q ss_pred             C-----------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        257 S-----------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       257 ~-----------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      +           ...+...+...+..+++.+..+++.|| +++|+.+..+.+...+....+ ... ........    ..
T Consensus       239 g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~-~~~-~~~~~~~~----~l  311 (418)
T TIGR00889       239 GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFF-AYG-DPEYFGYA----LL  311 (418)
T ss_pred             cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHc-CcchhhHH----HH
Confidence            2           345888888889999999999999998 999999988888776665444 221 11100111    23


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhh-hhhhhHHHHHHHHhhccccccCcc-----chhhHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLR-VPTNFITCFTLIFIKNEDAEGGKL-----IAIHSVFVVCT  399 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  399 (440)
                      +....+.+++.+...+....++.|..|+++|++++|+.+ ....+|..++|.+.   |.+.|..     .+|+..|.+++
T Consensus       312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~---G~l~~~~g~~~~~~~~~~f~~~~  388 (418)
T TIGR00889       312 FLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS---GVMVEKMFAYGTFDWQTMWLFFA  388 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH---HHHHHHhccccCCchHHHHHHHH
Confidence            334445556667777888888999999999999999997 56788999999844   6666621     46889998888


Q ss_pred             HHHHHHHHHHHHhhh
Q psy10432        400 ACLLVALLASCVFKR  414 (440)
Q Consensus       400 ~~~~~~~~~~~~~~~  414 (440)
                      ++.+++.+......+
T Consensus       389 ~~~~i~~~l~~~~~~  403 (418)
T TIGR00889       389 GYIAILAVLFMIFFK  403 (418)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            777776665555444

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.96  E-value=9.8e-28  Score=223.64  Aligned_cols=332  Identities=17%  Similarity=0.166  Sum_probs=228.2

Q ss_pred             HHHHHHHHHHHhhhhhHhh-hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc
Q psy10432         22 IPFFLATFSDWIQGPYVYK-VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS   99 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~   99 (440)
                      ...+..........+..|. +.+++|.|+.+.+++.++......+.+++.|+++||+|||+.++.+.++..++ +++.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~   87 (366)
T TIGR00886         8 FGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA   87 (366)
T ss_pred             HHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence            4444555556667888875 77999999999999888888888888889999999999999999999999998 677888


Q ss_pred             c-hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--------
Q psy10432        100 S-DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI--------  170 (440)
Q Consensus       100 ~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------  170 (440)
                      + +++.+++.|+++|++.+.. +...+++.      |++|+++|+++.++.....++|..+++.+++.+.+.        
T Consensus        88 ~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~  160 (366)
T TIGR00886        88 VQSYSVLLLLRLFIGIAGGSF-ASCMPWIS------FFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP  160 (366)
T ss_pred             hhhHHHHHHHHHHHHHhchhh-HhHHHHHH------HhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence            8 9999999999999986654 44445555      999999999999999988888888888887776653        


Q ss_pred             --cccCchhhH-HHHHHHHHHHHHHHHHhccccCCCCCccCCCCcc--------chhhhhhhhccCcchHHHHHHHHHHH
Q psy10432        171 --LNLGPIAPF-AVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPN--------SMFSSLKFLFTNPCLLTLGIVQSIYE  239 (440)
Q Consensus       171 --~gw~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (440)
                        .+|  |+.+ +.......+..++.....+|++++++++++.+.+        +..+..++.+++|+++...+...+..
T Consensus       161 ~~~~w--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (366)
T TIGR00886       161 AHLAW--GWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTF  238 (366)
T ss_pred             ccccc--cchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHH
Confidence              367  6666 3323333333334444455554322211110100        01114556778888887766666555


Q ss_pred             hHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcccc
Q psy10432        240 GIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFD  315 (440)
Q Consensus       240 ~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (440)
                      ...+......++++ +..+   .+.+.......+..++++++.|++.|| +++|+....+......+...+ ........
T Consensus       239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~  316 (366)
T TIGR00886       239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGAFLV-VLGLVSPL  316 (366)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHHHHH-HhcCCCcc
Confidence            55555444344444 3333   567778888888899999999999998 999887776665555544333 22111110


Q ss_pred             chhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhH
Q psy10432        316 SRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFI  370 (440)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g  370 (440)
                      ...     .......+..+..|...+.......+..| +++|++.|+.+...++|
T Consensus       317 ~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g  365 (366)
T TIGR00886       317 SLA-----VFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG  365 (366)
T ss_pred             hHH-----HHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence            111     22333334455567766777777778766 79999999999888775

>KOG4332|consensus

Probab=99.96  E-value=1.8e-28  Score=201.82  Aligned_cols=396  Identities=36%  Similarity=0.705  Sum_probs=308.8

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHh
Q psy10432          8 KTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYG   87 (440)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~   87 (440)
                      ..++...+++..++.++.+...++|+.+|+++.+|+.+|....++|.+|..|+....+++.+.|.++|+-|||+..+.-+
T Consensus        30 ntsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtyc  109 (454)
T KOG4332|consen   30 NTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC  109 (454)
T ss_pred             cCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeeh
Confidence            34556677888899999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             HHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHH
Q psy10432         88 IVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHF  166 (440)
Q Consensus        88 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~  166 (440)
                      +.+.++|+.-.++++-.++++|++-|++.+..+++..+|......-++-++.+.....++-.. .++.+-.+++.+.+..
T Consensus       110 itYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~  189 (454)
T KOG4332|consen  110 ITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNL  189 (454)
T ss_pred             HHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHH
Confidence            888888889999999999999999999999999999999986665455555555555555543 5566778888889999


Q ss_pred             HHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432        167 FADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI  246 (440)
Q Consensus       167 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (440)
                      +.++++..+..+|-.++....+...++..-+.|+..++.++++ ...+.+...+.+..++++..+.....++...+|.+.
T Consensus       190 lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kd-lltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFV  268 (454)
T KOG4332|consen  190 LVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKD-LLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFV  268 (454)
T ss_pred             HHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHH-HHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheee
Confidence            9999988889999988888877777776667777654433221 233344556678889999999999999999999999


Q ss_pred             Hhhhhhhh--ccCCchhhHHHHHHHHHHHHHHHHHHHHhh-ccCCchhHHHHHHHHHHHHHHH-HHhhhccccchhhcch
Q psy10432        247 FVWTPVLE--VLSPPLGLVFSCFMISIMIGSKIYSILILK-YFKPETMLTLTVYLATFSITVS-TVLTSSLFDSRRVLST  322 (440)
Q Consensus       247 ~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  322 (440)
                      ..|.|.++  ..+..-|.+++.+.++.++|+-+..++..| +...+..+.+.+........+. ......+....+.   
T Consensus       269 FLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~---  345 (454)
T KOG4332|consen  269 FLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPS---  345 (454)
T ss_pred             eeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCch---
Confidence            99999995  445778999999999999999999888875 1222334445444444433322 1222233333333   


Q ss_pred             hHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432        323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL  402 (440)
Q Consensus       323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (440)
                       ..+++++++..+.|+++|...-+-.++.|++.|++.+.+.+.--++...++..-.    ...+...+-+.+|.+|....
T Consensus       346 -~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl----h~~~~p~~tr~mf~icS~~~  420 (454)
T KOG4332|consen  346 -ESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL----HVDAFPTTTRNMFGICSAFL  420 (454)
T ss_pred             -HHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec----ccccCccccchhhhhhHHHH
Confidence             5788999999999999999999999999999999999999888877766665521    12222445578899998888


Q ss_pred             HHHHHHHHHh
Q psy10432        403 LVALLASCVF  412 (440)
Q Consensus       403 ~~~~~~~~~~  412 (440)
                      .++.+....+
T Consensus       421 ~~a~i~~~~L  430 (454)
T KOG4332|consen  421 FVASILQRRL  430 (454)
T ss_pred             HHHHHHHHHH
Confidence            7776554443

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.96  E-value=2.1e-27  Score=225.12  Aligned_cols=369  Identities=14%  Similarity=0.055  Sum_probs=230.5

Q ss_pred             HHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hhc-
Q psy10432         22 IPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LTK-   97 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~~-   97 (440)
                      ...+...++.....|+++... +++|.|+.++|++.++..+...+.+|+.|+++||+||||+++.+..+.++. . ... 
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~   96 (420)
T PRK09528         17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY   96 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence            444455555556777875555 459999999999999999999999999999999999999988766655544 2 111 


Q ss_pred             -ccchhH-HHHHHHHHHHHHHhhhccccchhhhcccccccccc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432         98 -FSSDFY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP--VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus        98 -~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                       .++... .......+.++..+...+.....+.      ++.+  ++++++.++......++|..++|++++.+.+. +|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~  169 (420)
T PRK09528         97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIE------AYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NP  169 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhh------hHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc-Cc
Confidence             111110 0111222223322322221111121      3322  34567788899999999999999999999875 77


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhccccCCCCCc---cCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhh
Q psy10432        174 GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA---KSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWT  250 (440)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (440)
                        +..|+..+...++..++.++..||++++++.   +++.+.+...+..+..+|||.++...+...........+....+
T Consensus       170 --~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~  247 (420)
T PRK09528        170 --QINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFP  247 (420)
T ss_pred             --hHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHH
Confidence              7778777666555554444444443332111   10001112234455678889887655544333333222222233


Q ss_pred             hhh----hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432        251 PVL----EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN  323 (440)
Q Consensus       251 ~~~----~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (440)
                      +++    +..+   ...|...+...++.+++.++.|++.|| +++|+.+..+..+..+..... .+.   +..+      
T Consensus       248 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~-~~~---~~~~------  316 (420)
T PRK09528        248 NFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGS-GFA---TGPL------  316 (420)
T ss_pred             HHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHH-Hhc---ccHH------
Confidence            332    1112   456788888888899999999999998 999998877777666655444 221   1112      


Q ss_pred             HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH-hhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHH
Q psy10432        324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW-LRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACL  402 (440)
Q Consensus       324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (440)
                      .......+.+...+...+....++.+..|++.+++..+. .++..++|..++|.+.   |.+.| ..|++..|...+++.
T Consensus       317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~---G~l~~-~~G~~~~f~~~~~~~  392 (420)
T PRK09528        317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLA---GNLYD-SIGFQGTYLILGGIV  392 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHH---HHHHH-hhCchHHHHHHHHHH
Confidence            122333333444555555666777888899999888765 6777889999999854   77888 788999999888877


Q ss_pred             HHHHHHHHHhhh
Q psy10432        403 LVALLASCVFKR  414 (440)
Q Consensus       403 ~~~~~~~~~~~~  414 (440)
                      ++..++.+...+
T Consensus       393 ~i~~~~~~~~~~  404 (420)
T PRK09528        393 LLFTLISVFTLS  404 (420)
T ss_pred             HHHHHHHHHHhc
Confidence            766655554433

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.96  E-value=9.7e-27  Score=218.36  Aligned_cols=344  Identities=13%  Similarity=0.052  Sum_probs=244.9

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchhHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDFYIL  105 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~~~l  105 (440)
                      ..++..|.+|.+.+++|.|+.+.|++.+..+....+.+++.|++.||+|||++++.+.++.+++ .+.   ...++++.+
T Consensus        18 ~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~   97 (410)
T TIGR00885        18 ANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLF   97 (410)
T ss_pred             HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence            4567789999999999999999999877777777777789999999999999999999999998 443   234689999


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI---------------  170 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------  170 (440)
                      ++.|++.|+|.+...+..++++.      +..|+++|++..++.+...++|..+||.+++.+...               
T Consensus        98 l~~~~l~G~g~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~  171 (410)
T TIGR00885        98 LVGLFILTAGLGFLETAANPYIL------VMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSP  171 (410)
T ss_pred             HHHHHHHHhhHHHHHhhhhHHHH------HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence            99999999999999887777777      888999999999999999999999999999887532               


Q ss_pred             -----------cccCchhhHHHHHHHHHHHHHHHH-HhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHH
Q psy10432        171 -----------LNLGPIAPFAVAIPFLLGSTLFIY-FCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIY  238 (440)
Q Consensus       171 -----------~gw~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (440)
                                 .+|  |.+|++.+.+.++..+... ...||.++++  +   ++.+..+..++++|+|+++...+..++.
T Consensus       172 ~~~~~~~~~~~~~w--~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~f~y  244 (410)
T TIGR00885       172 EELSAIKHSDLASV--QTPYMIIGAVVLAVALLIMLTKMPALNHSD--A---KQISFSASLSRLARIRHYREGVIAQFFY  244 (410)
T ss_pred             HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCCccc--c---ccccchhhHHHHHhChhHHHHHHHHHHH
Confidence                       346  8888777766554443332 2234321111  1   1112233556778889988877776666


Q ss_pred             HhHHHHHHHhhhhhhhcc--C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432        239 EGIMYTFIFVWTPVLEVL--S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL  313 (440)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~--~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (440)
                      .+......++.+++.++.  +   ...+...+....+..+|+++.+++.|| +++++.+........+..+.. ....  
T Consensus       245 vg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~~ll~-~~~~--  320 (410)
T TIGR00885       245 VGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMALCLGS-IFAG--  320 (410)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHH-HHcC--
Confidence            555545544444444322  2   222334555557788999999999998 999988777776666655444 2111  


Q ss_pred             ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccc----
Q psy10432        314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLI----  389 (440)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~----  389 (440)
                      +  .      ...+.+.+.+++.+..+|...++..+..+++......++....  +|+.+.|.+.   |.+.| ..    
T Consensus       321 ~--~------~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~---G~~~d-~~~~~~  386 (410)
T TIGR00885       321 G--H------VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQ---GFIID-MKEIAA  386 (410)
T ss_pred             C--h------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHH---HHHHH-Hhcccc
Confidence            1  1      1244444555667778899999999998877654444444433  8999999966   66777 32    


Q ss_pred             --hhhHHHHHHHHHHHH
Q psy10432        390 --AIHSVFVVCTACLLV  404 (440)
Q Consensus       390 --~~~~~~~~~~~~~~~  404 (440)
                        +++..|.+...+.+.
T Consensus       387 ~~~~~~~~~~~~~~~~~  403 (410)
T TIGR00885       387 APAVNTSFILPLLCFAV  403 (410)
T ss_pred             cCccchHHHHHHHHHHH
Confidence              467777765444443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00901 2A0125 AmpG-related permease

Probab=99.96  E-value=3.5e-27  Score=218.82  Aligned_cols=320  Identities=14%  Similarity=0.107  Sum_probs=224.9

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-----chhHHH-HHHhHHHHHh-hhhccc---chh
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-----GRKLIC-ISYGIVYTLC-CLTKFS---SDF  102 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~l-~~~~~~~~~~-~~~~~~---~~~  102 (440)
                      +..+..|.+.+|+|+|.+++++...++ ....+ .+++|+++||+     ||||.+ +.+.+..++. ...++.   .+.
T Consensus         6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l   83 (356)
T TIGR00901         6 LVGNTLPYWLRSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL   83 (356)
T ss_pred             hHHhHHHHHHHHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence            355677788899999999999876443 22232 67999999998     899974 5666666666 445555   456


Q ss_pred             HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cC
Q psy10432        103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN--------LG  174 (440)
Q Consensus       103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~  174 (440)
                      +.+....++.+++.+...++.++++.      |++|+|+|+++.++...+.++|.++++.+++.+.+..+        | 
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~a~~~------~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w-  156 (356)
T TIGR00901        84 PLLAGLAFLIAFFSATQDIALDAWRL------EILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW-  156 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc-
Confidence            66777788888888888787777777      99999999999999999999999999999999998888        7 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcc---hHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432        175 PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPC---LLTLGIVQSIYEGIMYTFIFVWTP  251 (440)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  251 (440)
                       |..|++.++..++..+..++..||++++++++ ++..++.++.++.++++|.   ++...+...+.....+......++
T Consensus       157 -r~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (356)
T TIGR00901       157 -GYIFFWTALLILPGLLVTLFLAKEPQEDASVP-KPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTL  234 (356)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhccCCCcccccc-hhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             98998888766655444444456653322111 1112234456777888776   555555555555555555444454


Q ss_pred             hhhccC---CchhhHHHHHH-HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc-c----chhhcch
Q psy10432        252 VLEVLS---PPLGLVFSCFM-ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF-D----SRRVLST  322 (440)
Q Consensus       252 ~~~~~~---~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~  322 (440)
                      ++++.+   .+.+......+ ++.+++.++.+++.|| +++|+.+..+.++..+............. .    +...   
T Consensus       235 ~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  310 (356)
T TIGR00901       235 FLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL---  310 (356)
T ss_pred             HHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH---
Confidence            444344   45566666555 5778999999999997 99999888777776665543322211110 0    0111   


Q ss_pred             hHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhh
Q psy10432        323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTN  368 (440)
Q Consensus       323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  368 (440)
                       .......+.+++.+...+...++.+|.+|+++||+.+|+.+...+
T Consensus       311 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       311 -MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             -HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence             234444456677888999999999999999999999999887654

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.96  E-value=1.8e-26  Score=223.36  Aligned_cols=349  Identities=12%  Similarity=0.050  Sum_probs=216.3

Q ss_pred             CChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccch------hHHHHHHHHHHHHHHhhh
Q psy10432         47 YDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSD------FYILLYGRLFGGIATSIL  119 (440)
Q Consensus        47 ~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~------~~~l~~~r~l~G~~~~~~  119 (440)
                      .++.+.+++.........+..+++|+++||+|||+.+..+.++..++ .+++++++      ++.++++|+++|++.+..
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~  132 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD  132 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence            44555566555555555555569999999999999999999988888 66666654      788999999999999999


Q ss_pred             ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------cccCchhh
Q psy10432        120 FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI---------------------LNLGPIAP  178 (440)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------------~gw~~~~~  178 (440)
                      .+....++.      |++|+++|+++.++.+....+|.++++.++..+...                     .+|.||..
T Consensus       133 ~~~~~~~~~------e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~  206 (502)
T TIGR00887       133 YPLSAIITS------EFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRIL  206 (502)
T ss_pred             hHHHHHHHH------HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHH
Confidence            887777777      999999999999999999999999999988766431                     12334988


Q ss_pred             HHHHHHHHHHHHHHHHHhccccCCC----CCc-c------------C-CCCc----------cchhhhhhhhccC---cc
Q psy10432        179 FAVAIPFLLGSTLFIYFCWEEHYDP----KTA-K------------S-SLLP----------NSMFSSLKFLFTN---PC  227 (440)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~e~~~~----~~~-~------------~-~~~~----------~~~~~~~~~~~~~---~~  227 (440)
                      +.+..+..++. .+..+++||+|+-    +++ +            + +.+.          +..+.++++++++   ++
T Consensus       207 ~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  285 (502)
T TIGR00887       207 IGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWR  285 (502)
T ss_pred             HHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhH
Confidence            87776665543 3345678998651    110 0            0 0000          0011235555442   22


Q ss_pred             hHHHHH----HHHHHHhHHHHHHHhhhhh-hhccC---Cchh-----------h-HHHHHHHHHHHHHHHHHHHHhhccC
Q psy10432        228 LLTLGI----VQSIYEGIMYTFIFVWTPV-LEVLS---PPLG-----------L-VFSCFMISIMIGSKIYSILILKYFK  287 (440)
Q Consensus       228 ~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~---~~~g-----------~-~~~~~~~~~~~~~~~~g~l~~r~~~  287 (440)
                      .+...+    ..+......+... .+.|. ++..+   ...+           . ......++.+++.++.+++.|| +|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~y~~~-~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~g  363 (502)
T TIGR00887       286 HGKHLLGTAGSWFLLDIAFYGVN-LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IG  363 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccc-cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hc
Confidence            211111    1111122222222 23333 33332   1111           1 1233445667788999999997 99


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh-chhhhHHhHhccCCcchhhHHHHHHhhhh
Q psy10432        288 PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG-MYCPVTGYLRGRIIPEKARATITNWLRVP  366 (440)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~  366 (440)
                      ||+.+..+..+..++...+......... ..      ......+..+..+ ...+..+.+..|.+|++.|+++.|+.+..
T Consensus       364 RR~~l~~~~~~~~~~~~~l~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~  436 (502)
T TIGR00887       364 RKPIQLMGFFILTVLFFVLGFAYNHLST-HG------FLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAAS  436 (502)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcch-hH------HHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence            9998877776666655444221111010 10      1111111111112 23456667789999999999999999999


Q ss_pred             hhhHHHHHHHHhhccccccCc---------cchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        367 TNFITCFTLIFIKNEDAEGGK---------LIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       367 ~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ..+++.++|.++   +...+.         ..++...|.+.+++.+++.+..+.+++
T Consensus       437 ~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpE  490 (502)
T TIGR00887       437 GKAGAIIGQFGF---LYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPE  490 (502)
T ss_pred             hhhHHHHHHHHh---hhhhccccccccccccccchHHHHHHHHHHHHHHHHheEecc
Confidence            999999999855   434331         134456677777666666555443443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.96  E-value=1e-26  Score=246.72  Aligned_cols=373  Identities=12%  Similarity=0.012  Sum_probs=247.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhHh-----hhHhhcCCCh-hhHHHHHHHHHHHHhhhhccccccccccchhHHHHH---HhHH
Q psy10432         19 RYFIPFFLATFSDWIQGPYVY-----KVYKDYGYDE-KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICIS---YGIV   89 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~s~-~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~---~~~~   89 (440)
                      .++...+++.+++++....+.     .+..+.+.+. ...++..++..+...+++|++|+++||+|||+++..   ..+.
T Consensus        15 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~   94 (1140)
T PRK06814         15 PLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIG   94 (1140)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHH
Confidence            344555566666544332221     1223333322 345566666777777777899999999999998643   2222


Q ss_pred             HHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         90 YTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus        90 ~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                      ..+. ......++++.++++|+++|++.+...|+..+.+.      |++++++|++++++.+++.++|.++||++++++.
T Consensus        95 ~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~------~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~  168 (1140)
T PRK06814         95 IAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILP------DHLNKDELLGANALVEAGTFIAILLGTIIGGLAT  168 (1140)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhH------hhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222 23334589999999999999999999898877777      9999999999999999999999999999999999


Q ss_pred             hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC--CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432        169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS--SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI  246 (440)
Q Consensus       169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (440)
                      +..+|  +..|.......+ ..++..+.+|+++++++..+  ....++..+.++.+.++|.++...+...+.+.....+.
T Consensus       169 ~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (1140)
T PRK06814        169 ISGNF--VILVALLMGIAV-LGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVL  245 (1140)
T ss_pred             hcccc--HHHHHHHHHHHH-HHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence            99999  777644333333 33444555666543322111  11112345678888999999988777777666665554


Q ss_pred             Hhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhc--c-ccc---
Q psy10432        247 FVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS--L-FDS---  316 (440)
Q Consensus       247 ~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~---  316 (440)
                      ...++++ +..+   ...|++.+..+++.++++++.+++.|| ..+++.+..+.++..+..+.+......  . ...   
T Consensus       246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  324 (1140)
T PRK06814        246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS  324 (1140)
T ss_pred             HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence            5344444 3323   668899999999999999999999986 666665555554444433333111000  0 000   


Q ss_pred             ----hhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhh
Q psy10432        317 ----RRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIH  392 (440)
Q Consensus       317 ----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  392 (440)
                          ...+......+...+++++.+...+...+++++.+|++.+|+++|+.++..+++..+++.+.   +.+.+...++.
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~---g~l~~~~~~~~  401 (1140)
T PRK06814        325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL---ALLQALGFSIP  401 (1140)
T ss_pred             hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH---HHHHHhccCHH
Confidence                00001112344555666777878888999999999999999999999999999999999854   44432244556


Q ss_pred             HHHHHHHHHHHH
Q psy10432        393 SVFVVCTACLLV  404 (440)
Q Consensus       393 ~~~~~~~~~~~~  404 (440)
                      ..+.+++.+.++
T Consensus       402 ~~~~~~~~~~~~  413 (1140)
T PRK06814        402 WIILFIALANLI  413 (1140)
T ss_pred             HHHHHHHHHHHH
Confidence            666555544333

>TIGR00896 CynX cyanate transporter

Probab=99.96  E-value=1.2e-26  Score=215.04  Aligned_cols=325  Identities=12%  Similarity=0.072  Sum_probs=228.3

Q ss_pred             HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432         32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL  110 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~  110 (440)
                      ....|.+|.+.+++|.|+++.++..++......+.+++.|+++||+||||++..+.++..++ ..+ .+++++.+++.|+
T Consensus        17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~   95 (355)
T TIGR00896        17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA   95 (355)
T ss_pred             ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence            34678899999999999999999888888877777789999999999999999998888877 555 7788999999999


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      +.|++.+...+...+.+.      |+++ ++|+++++..+...++|..+++.+++.+.+..+++||..|.......++..
T Consensus        96 ~~g~g~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~  168 (355)
T TIGR00896        96 LIGVGIAIINVLLPSLIK------RDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL  168 (355)
T ss_pred             HHHHHHHHHhccchHHHH------HhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence            999999987665555554      8775 689999999999999999999999999887754223777765554333222


Q ss_pred             HHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHH
Q psy10432        191 LFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCF  267 (440)
Q Consensus       191 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~  267 (440)
                         ...+||.+++++++++ .   .....++.+|||.++...+...+.....+......+.+++..+   .+.+...+..
T Consensus       169 ---~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~  241 (355)
T TIGR00896       169 ---LAWIPQVRRRVAANQT-T---TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALM  241 (355)
T ss_pred             ---HHHhhhhccccCCCCC-C---CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence               1234544322221111 1   1123456778888877666555555555554443344444334   5678889999


Q ss_pred             HHHHHHHHHHHHHHHhhccC-CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432        268 MISIMIGSKIYSILILKYFK-PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL  346 (440)
Q Consensus       268 ~~~~~~~~~~~g~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  346 (440)
                      .++.++++++.|++.|| ++ +|+.+..+..+.+++.+.+ .+..  . ...      .. ...+++++.|...|...+.
T Consensus       242 ~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~-~~~~--~-~~~------~~-~~~l~g~~~g~~~~~~~~~  309 (355)
T TIGR00896       242 QLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGL-LFAP--M-HGL------WA-WALVLGLGQGGAFPLALTL  309 (355)
T ss_pred             HHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHH-HHhh--h-hHH------HH-HHHHHHHhhhhHhHHHHHH
Confidence            99999999999999997 84 4555556555555554433 2111  1 111      11 2334566677777776665


Q ss_pred             hc-cCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432        347 RG-RIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       347 ~~-~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  386 (440)
                      .. +..+++++++..++.+...+++..++|.+.   |.+.|
T Consensus       310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~---G~l~~  347 (355)
T TIGR00896       310 IGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV---GVLHD  347 (355)
T ss_pred             HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence            54 444567789999999999999999999854   55555

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.96  E-value=7.3e-27  Score=219.95  Aligned_cols=333  Identities=17%  Similarity=0.134  Sum_probs=221.8

Q ss_pred             CChhhHHH-----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH--------HHHHHHHHH
Q psy10432         47 YDEKNIAL-----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY--------ILLYGRLFG  112 (440)
Q Consensus        47 ~s~~~~~~-----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~--------~l~~~r~l~  112 (440)
                      .++++.+.     .+..++....+.+++.|+++||+||||++..+.++..++ .+++++++++        .+++.|+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~  106 (394)
T TIGR00883        27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ  106 (394)
T ss_pred             CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence            44555554     344455555556689999999999999999999999988 6788888875        478899999


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcccCchhhHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD--------ILNLGPIAPFAVAIP  184 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--------~~gw~~~~~~~~~~~  184 (440)
                      |++.+...+...+++.      |+.|+++|++..+..+.+..+|.++++.++..+..        ..+|  |..+++...
T Consensus       107 G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w--~~~~~~~~~  178 (394)
T TIGR00883       107 GFSLGGEWGGAALYLA------EYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGW--RIPFLVSAV  178 (394)
T ss_pred             HhhccccccccHHHhh------hcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccch--HHHHHHHHH
Confidence            9999998887777777      99999999999999999999999999998877643        3466  888877665


Q ss_pred             HHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcc--hHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---C
Q psy10432        185 FLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPC--LLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---P  258 (440)
Q Consensus       185 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~  258 (440)
                      ..++.. ......||+++.+++++  +.++..++.++.+++++  ++.......+.....+......++++ +..+   .
T Consensus       179 ~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  255 (394)
T TIGR00883       179 LVLIGL-YLRRNLEETPVFEKAQE--KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSAN  255 (394)
T ss_pred             HHHHHH-HHHHhcCCChhHHHHHh--ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence            554333 33344566543222111  11111234455555555  55555555444444444444344444 3333   5


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432        259 PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM  338 (440)
Q Consensus       259 ~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  338 (440)
                      +.+.......++.+++.++.+++.|| +++|+.+.....+..+...............+      .......+.+++.+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~  328 (394)
T TIGR00883       256 SALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLAVPLLMALLDSGSFT------LFFFLVLGLALIGGM  328 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhcCCchH------HHHHHHHHHHHHHHH
Confidence            67777888889999999999999998 99888766544433332211111111111111      233344455556677


Q ss_pred             hhhhHHhHhccCCcchhhHHHHHHh-hhhhhhHHHHHHHHhhccccccCccch-hhHHHHHHHHH
Q psy10432        339 YCPVTGYLRGRIIPEKARATITNWL-RVPTNFITCFTLIFIKNEDAEGGKLIA-IHSVFVVCTAC  401 (440)
Q Consensus       339 ~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  401 (440)
                      ..+...+.+.|.+|+++|+++.++. +....++..++|.+.   +.+.+ ..+ ++..+....++
T Consensus       329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~---g~l~~-~~g~~~~~~~~~~~~  389 (394)
T TIGR00883       329 YTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA---AALVA-MTGDWYAIGYYLAAL  389 (394)
T ss_pred             HhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH---HHHHH-HcCcchhHHHHHHHH
Confidence            7888889999999999999999985 445567788888844   66666 445 55555554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>KOG1330|consensus

Probab=99.96  E-value=1.2e-28  Score=219.55  Aligned_cols=331  Identities=14%  Similarity=0.078  Sum_probs=227.9

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ...+....+.+.+.+|++++..|++..+......+.+|+.|+++|||+||+++.+|..++.++ ++++++..||+++++|
T Consensus        49 r~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R  128 (493)
T KOG1330|consen   49 RYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCR  128 (493)
T ss_pred             hhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444566777899999999999888888888888899999999999999999999999999 8999999999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      .+.|+|.+...|..++.+.      |.+|+++|++.+++++....+|..+|.+.+..+.+..+| ||+.|...+++.+++
T Consensus       129 ~~vGiGeAs~~~ia~s~Ia------D~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~-Wr~af~~~avl~vi~  201 (493)
T KOG1330|consen  129 GFVGIGEASYSPIAPSLIA------DSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW-WRWAFRGSAVLGVIV  201 (493)
T ss_pred             HHhccchhhhcccchhHhh------hcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc-eEEEEEeehHHHHHH
Confidence            9999999999998888888      999999999999999999999999999999999988774 599999999999988


Q ss_pred             HHHHHHhccccCCCCCccCC------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--------hc
Q psy10432        190 TLFIYFCWEEHYDPKTAKSS------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--------EV  255 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  255 (440)
                      .++..++.+|+++..+++.+      ....+..++.+.+.+++.+....+.....++....+ ..|.|.+        +.
T Consensus       202 ~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~-sww~p~~~~~~~~~~~~  280 (493)
T KOG1330|consen  202 GLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSL-SWWAPAFIYYSYELIGF  280 (493)
T ss_pred             HHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhcccc-chhhhhHHHHHHHHhCC
Confidence            88888888888763322211      122344566667777676655443333333332222 3344544        11


Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHHHHHhh---ccCCchhHHHHHHHHHHH---HHHH-HHhhhccccchhhcchhHHHHH
Q psy10432        256 LSPPLGLVFSCFMISIMIGSKIYSILILK---YFKPETMLTLTVYLATFS---ITVS-TVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       256 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                      .+...-+...+...++.+|..++|.++||   .+++........+.++.+   .+.+ +.......... .     ..+.
T Consensus       281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~-~-----~~~i  354 (493)
T KOG1330|consen  281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSM-I-----FGLI  354 (493)
T ss_pred             ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHH-H-----HHHH
Confidence            22344445566667778888888888886   122222233332222222   2122 11122221111 1     1111


Q ss_pred             HHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432        329 FLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       329 ~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~  375 (440)
                      +.+.+..... .+.....+..+.+|++.|.+++++...+..+.+-.++
T Consensus       355 l~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~  402 (493)
T KOG1330|consen  355 LFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAAS  402 (493)
T ss_pred             HHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCC
Confidence            1111111222 3345556778888999999999998877766554444

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.96  E-value=1e-25  Score=215.07  Aligned_cols=328  Identities=13%  Similarity=0.104  Sum_probs=230.6

Q ss_pred             HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc----cchhH-HHHHHhHHHHHh-hhhcccch--
Q psy10432         31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK----FGRKL-ICISYGIVYTLC-CLTKFSSD--  101 (440)
Q Consensus        31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~-~l~~~~~~~~~~-~~~~~~~~--  101 (440)
                      ..+..++++..+ +++|+++.++|.+..+..+...+..|+.|+++||    +|||| .++.+....+++ .++...++  
T Consensus        15 ~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~   94 (437)
T TIGR00792        15 FAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS   94 (437)
T ss_pred             HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC
Confidence            344555555555 6789999999999999999999999999999997    68755 466677777776 55544443  


Q ss_pred             ----hHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Q psy10432        102 ----FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-------  169 (440)
Q Consensus       102 ----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------  169 (440)
                          ...+++.+++.+++.+.......++..      |.. +++||++..++.+.+..+|..+++.+.+.+..       
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~  168 (437)
T TIGR00792        95 ATGKLVYAYITYILLGLFYSFVNIPYWSLVP------AITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD  168 (437)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhcccHhhCcc------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence                456677888889988887555555555      776 56899999999999999998887777666654       


Q ss_pred             hcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhh
Q psy10432        170 ILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW  249 (440)
Q Consensus       170 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (440)
                      ..+|  +..+.+.+++..+..+...+..||+++++++++ +++.+.++.++.+++||.++...+...+.....+.... +
T Consensus       169 ~~g~--~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~  244 (437)
T TIGR00792       169 KFGW--FMFALVLALIGVVSLIICFFGTKERYSEIPKNI-EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNG-V  244 (437)
T ss_pred             cccH--HHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc-ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcc-h
Confidence            2356  878777777766666666667787653221111 12234566788899999998877776666665554422 3


Q ss_pred             hhhh-hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        250 TPVL-EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       250 ~~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      .+++ +.   .....+.......++.+++.++.+++.|| +++|+.+..+..+.+++.+.+ .+..  +..+      ..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~-~~~~--~~~~------~~  314 (437)
T TIGR00792       245 QVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIF-FFAG--SNLP------LI  314 (437)
T ss_pred             hheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHcc--hhHH------HH
Confidence            4444 21   12445666677788999999999999998 999998888877776665444 2211  1111      23


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCc-------chhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIP-------EKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      .....+.+++.+...+..+++..|..|       ++.+|+.+|+.++...++..+++.+.
T Consensus       315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~  374 (437)
T TIGR00792       315 LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV  374 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            334445556677777888888877755       45689999999999999999998754

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG2532|consensus

Probab=99.96  E-value=3.6e-26  Score=213.78  Aligned_cols=350  Identities=17%  Similarity=0.164  Sum_probs=252.7

Q ss_pred             hcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--chhHHHHHHHHHHHHHHh
Q psy10432         44 DYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SDFYILLYGRLFGGIATS  117 (440)
Q Consensus        44 ~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~~~~l~~~r~l~G~~~~  117 (440)
                      +++.|.++-++   .+..|++++++   +.|+++||+|-|+++..+.++.+++ .+...+  .+++.+++.|++||++.|
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~i---P~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g  143 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQI---PGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG  143 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHc---CcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence            57788888887   45566666665   9999999999999999999999998 654443  456788999999999999


Q ss_pred             hhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHh
Q psy10432        118 ILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-LNLGPIAPFAVAIPFLLGSTLFIYFC  196 (440)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~  196 (440)
                      ...|+......      +|.|++||++..++..++..+|.+++.+++|++.+. +||  +..|++.+...++..++...+
T Consensus       144 ~~~pa~~~i~~------~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW--~sifY~~g~~g~i~~~~w~~~  215 (466)
T KOG2532|consen  144 VLFPAIGSILA------KWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGW--PSIFYVFGIVGLIWFILWFLF  215 (466)
T ss_pred             HHHhhhhceee------eECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCC--chHHHHHHHHHHHHHHHHHHH
Confidence            99998777777      999999999999999999999999999999999998 899  888988888877666665555


Q ss_pred             ccccCCCCCcc-------------CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432        197 WEEHYDPKTAK-------------SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP  259 (440)
Q Consensus       197 ~~e~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~  259 (440)
                      ..|+|.+.+.-             ++...+...-+++.+++++.+|.+.+..+..+.+.+.+..+.|.++ +..+   .+
T Consensus       216 ~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~  295 (466)
T KOG2532|consen  216 YSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE  295 (466)
T ss_pred             hcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh
Confidence            55555432110             0001111244799999999999999999999998888877444444 3333   88


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCc-----hhHHHHHHHHHHH-HHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPE-----TMLTLTVYLATFS-ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE  333 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (440)
                      .|+..++..+.+.+..++.|.++|| ..+|     ....+...+...+ .+.+.........+. .    ..+..+.+..
T Consensus       296 ~G~~salP~l~~~~~k~~~g~lsD~-l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~-~----~a~~~l~~~~  369 (466)
T KOG2532|consen  296 TGFLSALPFLAMAIVKFVAGQLSDR-LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR-L----LAVILLTIAI  369 (466)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHH-HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc-h----HHHHHHHHHH
Confidence            9999999999999999999999997 5442     1112221111111 111111111111111 1    2333333333


Q ss_pred             HhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc-C-ccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        334 ISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG-G-KLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      ...|...+....-..+. .++..+.++|+.+....+.+.++|.+.   +.+. + +...|+.+|.+.+++.+++.++...
T Consensus       370 ~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~v---g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~  445 (466)
T KOG2532|consen  370 GLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLV---GIIVTDNTREEWRIVFLIAAGILIVGNIIFLF  445 (466)
T ss_pred             HHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHhe---eeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence            44555555555555554 458899999999999999999999965   4444 2 2568999999999998888866655


Q ss_pred             hhh
Q psy10432        412 FKR  414 (440)
Q Consensus       412 ~~~  414 (440)
                      +-+
T Consensus       446 f~s  448 (466)
T KOG2532|consen  446 FGS  448 (466)
T ss_pred             eec
Confidence            543

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.95  E-value=1.2e-25  Score=239.34  Aligned_cols=323  Identities=16%  Similarity=0.089  Sum_probs=225.2

Q ss_pred             hhHhhhHhhcCCCh--hhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhcccchhHHHHHHH
Q psy10432         36 PYVYKVYKDYGYDE--KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFSSDFYILLYGR  109 (440)
Q Consensus        36 ~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~~~~~~l~~~r  109 (440)
                      ...+.+..+++.+.  ...+++.++..+...++++++|+++||+|||++++.+.++..+. .   ++...++++.+++.|
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r  110 (1146)
T PRK08633         31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVT  110 (1146)
T ss_pred             HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence            33434445666543  33566666666666666689999999999999999887765554 2   344567899999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cccCchhhHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI--------LNLGPIAPFAV  181 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~~~~~~~~  181 (440)
                      +++|++.+...|+..+++.      |++|+++|++++++.+.+.++|.++|+.+++++.+.        ++|. .+.+..
T Consensus       111 ~l~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~-~~~~~~  183 (1146)
T PRK08633        111 FLLGAQSAIYSPAKYGIIP------ELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGR-IAPAGL  183 (1146)
T ss_pred             HHHHHHHHhhchHHHhhhH------HhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-hHHHHH
Confidence            9999999999887777777      999999999999999999999999999999999876        3331 233323


Q ss_pred             HHHHHHHHHHHHHHhccccCCCCCcc----CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hcc
Q psy10432        182 AIPFLLGSTLFIYFCWEEHYDPKTAK----SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVL  256 (440)
Q Consensus       182 ~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  256 (440)
                      ......+..++..+.+||.++..+.+    .....+...+.++.++++|.++...+...+.+...+......++++ +..
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (1146)
T PRK08633        184 VLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVL  263 (1146)
T ss_pred             HHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence            22233323333344567665432221    1111223345677788888888766666555555444444344444 323


Q ss_pred             C---C-chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHH
Q psy10432        257 S---P-PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIY  332 (440)
Q Consensus       257 ~---~-~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (440)
                      +   . ..+++.+...++.++++++.+++.|| .++++.+.++.++.+++.+.+ .+..    ...     ..++...++
T Consensus       264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~-----~~~~~~~~~  332 (1146)
T PRK08633        264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLL-PTAP----SLA-----SVLVLFFLF  332 (1146)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHH-HHhh----hHH-----HHHHHHHHH
Confidence            3   4 67888999999999999999999997 888887777766665555444 2111    111     234445566


Q ss_pred             HHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        333 EISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      +++.+...+...+++++..|++.||+++|+.+++.+++..+++.
T Consensus       333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~  376 (1146)
T PRK08633        333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLA  376 (1146)
T ss_pred             HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHH
Confidence            66777777888889999999999999999999999988877665

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.95  E-value=1.6e-25  Score=210.56  Aligned_cols=363  Identities=13%  Similarity=0.053  Sum_probs=236.2

Q ss_pred             HHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh---
Q psy10432         21 FIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL---   95 (440)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~---   95 (440)
                      ....+....+.+...|+++... +++|.|+.+++++.++..+...+.+|+.|+++||+|||+.++.+....+++ ..   
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~   87 (396)
T TIGR00882         8 GLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFI   87 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence            3444555555666788886655 568999999999999999999999999999999999999998876666554 21   


Q ss_pred             hcccc-----hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432         96 TKFSS-----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI  170 (440)
Q Consensus        96 ~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  170 (440)
                      ..+.+     .+..+++.+++.|++.+...|...++..      |..  +++++.++......++|..+||.+++.+.+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~  159 (396)
T TIGR00882        88 YVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIE------KVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI  159 (396)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH------Hhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc
Confidence            11222     2334566788888888877776555544      432  2345577888888899999999999988764


Q ss_pred             cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC---CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432        171 LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS---SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF  247 (440)
Q Consensus       171 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (440)
                       +|  +.+|+..+.+.++..++.+...||+++++++++   .++.+...++.++++|||+++...+..............
T Consensus       160 -~~--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~  236 (396)
T TIGR00882       160 -DP--QIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQ  236 (396)
T ss_pred             -Cc--hHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence             77  888887776666555544444454433221110   001111234567888999987765555444433332322


Q ss_pred             hhhhhhhc----cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhc
Q psy10432        248 VWTPVLEV----LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVL  320 (440)
Q Consensus       248 ~~~~~~~~----~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (440)
                      ..+.+++.    .+   ...|...+...+...++....+++.|| +++|+.+..+..+..+..... ..   ....+   
T Consensus       237 ~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~-~~---~~~~~---  308 (396)
T TIGR00882       237 QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGS-SF---ATTAL---  308 (396)
T ss_pred             HHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHH-Hh---cCChH---
Confidence            22222211    11   346777888888888899999999998 999998887777666655433 21   11111   


Q ss_pred             chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH-hhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHH
Q psy10432        321 STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW-LRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCT  399 (440)
Q Consensus       321 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (440)
                         .......+.+.+.............+..|++.+++..+. .+....+|..+++.+.   |.+.| ..|++..|.+.+
T Consensus       309 ---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~---G~l~~-~~G~~~~f~~~~  381 (396)
T TIGR00882       309 ---EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLA---GNMYD-SIGFQGAYLVLG  381 (396)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhH---HHHHH-hcccHHHHHHHH
Confidence               122222233333333333334455666677777776665 6778899999999844   78888 779999999988


Q ss_pred             HHHHHHHHHH
Q psy10432        400 ACLLVALLAS  409 (440)
Q Consensus       400 ~~~~~~~~~~  409 (440)
                      ++.++..+..
T Consensus       382 ~~~~i~~~~~  391 (396)
T TIGR00882       382 CIVLLFTLIS  391 (396)
T ss_pred             HHHHHHHHHH
Confidence            8776665543

>KOG3764|consensus

Probab=99.95  E-value=1.1e-26  Score=202.39  Aligned_cols=343  Identities=15%  Similarity=0.128  Sum_probs=250.5

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhcc
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFS  121 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~  121 (440)
                      ++.+.+.+++|+++..-.....+..|+.|.+.||+|+|..+++|...+..+ +++++.++++.++++|.+||+|.++..+
T Consensus        99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t  178 (464)
T KOG3764|consen   99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT  178 (464)
T ss_pred             cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence            445667889999999888888888899999999999999999999999998 8999999999999999999999999977


Q ss_pred             ccchhhhccccccccccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432        122 GFESWYVNEHLNYYLFPVEW-LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH  200 (440)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~  200 (440)
                      +..++++      |.+|+|+ |++++|+...+.++|.++||++||.+.+..|.  +.+|++.+.++++-..+.++.++.+
T Consensus       179 sglamlA------d~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk--~aPFlVL~~v~Lld~~L~l~vi~p~  250 (464)
T KOG3764|consen  179 SGLAMLA------DVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK--SAPFLVLAIVLLLDGALQLLVIEPT  250 (464)
T ss_pred             hhHHHHH------HHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC--cCcHHHHHHHHHHHHHHHHheeCcc
Confidence            7777777      9998885 79999999999999999999999999999999  9999999998888777777666554


Q ss_pred             CCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-----hc---cCCchhhHHHHHHHHHH
Q psy10432        201 YDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-----EV---LSPPLGLVFSCFMISIM  272 (440)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~g~~~~~~~~~~~  272 (440)
                      +.+++...  +    ..++++++++|..+.........+.+.    ...-|.+     +.   .+.+.|+.+....+...
T Consensus       251 ~~~~~~~~--~----~~~~~~Ll~dP~I~~~agai~~~n~~l----afLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~  320 (464)
T KOG3764|consen  251 EMDPDSTE--Q----GTPMWSLLMDPYILLIAGAITFSNSSL----AFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYA  320 (464)
T ss_pred             ccCccccc--c----CccHHHHHhCchHhhhhcchhhccchH----HHhCcccHHHHHHhccCCCcceeeeecccccchh
Confidence            43332111  1    225678889999888666555554444    2344544     11   13588999999999999


Q ss_pred             HHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH-HhhhccccchhhcchhHHHHHHHH-HHHhhhchhhhHHhHhccC
Q psy10432        273 IGSKIYSILILKYFKPETMLTLTVYLATFSITVST-VLTSSLFDSRRVLSTNLCFVAFLI-YEISVGMYCPVTGYLRGRI  350 (440)
Q Consensus       273 ~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  350 (440)
                      ++..+.|.+.|| +++.+.+.....+..++..... -+.......+ .     ...+.++ ....-....|....+++..
T Consensus       321 ig~~lfg~la~k-~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~-v-----p~~~l~~~i~~~dasl~P~l~~lvd~r  393 (464)
T KOG3764|consen  321 IGTNLFGKLADK-YPHLRWLLSLGGLATVGVSSGPIPFATSIAQLW-V-----PNFGLGFGIGLADASLIPTLGYLVDPR  393 (464)
T ss_pred             ccCchHHHHHHh-cCchhHHHHHHHHHHHHHHhchhHhhhhHHHHh-h-----hhHHHHHHHHHHHHHHhhhhHHhcchh
Confidence            999999999998 8865544333333333221110 1111111111 1     1111111 1111222455555555443


Q ss_pred             Cc--chhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        351 IP--EKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       351 ~p--~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      -.  .+..|.+.++......++.++||.  .+ |.+.+ ..|+.+...+.++..++-.-+...++.
T Consensus       394 h~s~~~vYGsVyaIad~a~sla~a~GP~--~g-g~iv~-~iGF~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  394 HVSGFNVYGSVYAIADAAFSLAYAIGPT--FG-GSLVE-AIGFEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             hccccceeeeHHHHHHHHHHHhhhcccc--cc-chhee-ehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21  126789999999999999999999  56 88888 899999888888877776666555554

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.95  E-value=1.9e-24  Score=202.86  Aligned_cols=357  Identities=10%  Similarity=-0.032  Sum_probs=240.3

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHH--HHHHHHHHhhhhccccc-cccccchhHHHHHHhHH-HHHh--hh--hcccch
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALL--YIAGFASSMIFGIVVGS-IADKFGRKLICISYGIV-YTLC--CL--TKFSSD  101 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~l~~~~~G~-l~Dr~Grr~~l~~~~~~-~~~~--~~--~~~~~~  101 (440)
                      ...+..|.+|...+|.|.|.+++|..  ..+.+....+.+|+++. ..||+||||..++...+ ..+.  .+  .....+
T Consensus        16 ~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~   95 (390)
T TIGR02718        16 PIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVA   95 (390)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchh
Confidence            35677889988889999999999995  46678888888888844 79999999997555433 2211  11  222322


Q ss_pred             -hHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432        102 -FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA  180 (440)
Q Consensus       102 -~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~  180 (440)
                       ...++...++.++..+...+..+++..      |..++++++...+....+..+|.++|+...+++.+++||  |..|+
T Consensus        96 ~~~~~~~~~~~~~~~~a~~d~~~d~~~~------~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw--~~~f~  167 (390)
T TIGR02718        96 GAGWAVGLLACASLASATQDIATDGMAA------EHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ--RPAFL  167 (390)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHH
Confidence             334445556666777777676666666      888888888888888888899999999999999999999  88888


Q ss_pred             HHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---
Q psy10432        181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---  257 (440)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  257 (440)
                      +.+.+.++..+..++. +|++++++++   + ++..+++++++|+|.++......++............++++++.+   
T Consensus       168 ~~a~l~~~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~  242 (390)
T TIGR02718       168 LVACVPLASLVCVLWL-KDRAVASPEA---P-LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPL  242 (390)
T ss_pred             HHHHHHHHHHHHHHHc-CCCCcCcccc---c-hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCH
Confidence            8887766555544433 3332221111   1 112345677888898887766666666655555554555554444   


Q ss_pred             CchhhHHHHHHH-HHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        258 PPLGLVFSCFMI-SIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       258 ~~~g~~~~~~~~-~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      ++.|......+. ..+++..+.|++.|| +++++.+..+........+...............    .......+..+..
T Consensus       243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  317 (390)
T TIGR02718       243 EWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIA----VAWSCSAFGSLIT  317 (390)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHH----HHHHHHHHHHHHH
Confidence            667777776664 667788999999998 9999888776655533322221111100000111    1222222334456


Q ss_pred             hchhhhHHhHhccCCcc-hhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPE-KARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      |...+.......+..++ +.+++.++..+...++|..++|.+.   |.+.| ..|++..|..++++.+++...
T Consensus       318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~---G~l~~-~~G~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA---GYLTD-RFGYAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHccHHHHHHHHHHHHHHHHH
Confidence            77767677776666665 8899999999999999999999944   77878 788889998888777666543

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.95  E-value=2.4e-24  Score=205.81  Aligned_cols=357  Identities=12%  Similarity=0.073  Sum_probs=227.0

Q ss_pred             HhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccchhHH-HHHHHHHHHHHHhh
Q psy10432         42 YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSSDFYI-LLYGRLFGGIATSI  118 (440)
Q Consensus        42 ~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~~~~~-l~~~r~l~G~~~~~  118 (440)
                      .+++|.+.++.+++.........+..+++|+++|| +||||+++.+.+++.++ ..++++++... ++++|+++|+|.|.
T Consensus        42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~  121 (489)
T PRK10207         42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGL  121 (489)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccc
Confidence            37899999999887777777777777899999999 99999999999999998 67777766444 55899999999999


Q ss_pred             hccccchhhhccccccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHh
Q psy10432        119 LFSGFESWYVNEHLNYYLFPVE--WLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFC  196 (440)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~  196 (440)
                      ..|...+.+.      |.+|++  +|+++++++..+.++|..+||.+++++.+++||  ++.|++..+... ..++.+..
T Consensus       122 ~~~~~~~li~------~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw--~~~F~i~~i~~~-~~~~~~~~  192 (489)
T PRK10207        122 FKANPASLLS------KCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY--SVTYNLCGAGLI-IALLVYFA  192 (489)
T ss_pred             ccCCHHHHHH------HhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh--HHHHHHHHHHHH-HHHHHHHH
Confidence            9888877777      999887  457799999999999999999999999999999  778877644333 22323323


Q ss_pred             ccccCCCC---CccCCCCccch----------------------------------------h--hhhhhhccCcchHHH
Q psy10432        197 WEEHYDPK---TAKSSLLPNSM----------------------------------------F--SSLKFLFTNPCLLTL  231 (440)
Q Consensus       197 ~~e~~~~~---~~~~~~~~~~~----------------------------------------~--~~~~~~~~~~~~~~~  231 (440)
                      .++..++.   .++++.+....                                        .  ...++..|+|.+...
T Consensus       193 ~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~  272 (489)
T PRK10207        193 CRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAF  272 (489)
T ss_pred             cchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            33221111   00000000000                                        0  000112333333222


Q ss_pred             HHH-HHHHHhHHHHHHHhhhhhh-hc-cC-------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCch-------hHHH
Q psy10432        232 GIV-QSIYEGIMYTFIFVWTPVL-EV-LS-------PPLGLVFSCFMISIMIGSKIYSILILKYFKPET-------MLTL  294 (440)
Q Consensus       232 ~~~-~~~~~~~~~~~~~~~~~~~-~~-~~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~  294 (440)
                      .+. ....+...+.......+.+ ++ .+       .....+...+.+..++.+++.+++.|| .++|+       .+..
T Consensus       273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~r-l~~r~~~~~~~~k~~~  351 (489)
T PRK10207        273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTH-LGSKGKDLSMPMKFTL  351 (489)
T ss_pred             HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHH-HhhCCCCCCcHHHHHH
Confidence            211 1111222222211222233 21 11       123445556667787888899999997 87776       3666


Q ss_pred             HHHHHHHHHHHHH----Hhhhc-cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh
Q psy10432        295 TVYLATFSITVST----VLTSS-LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF  369 (440)
Q Consensus       295 ~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~  369 (440)
                      +.++..++++.+.    ..... ......     .......+.+++.++..|...+.+.+..|++.+|.++|+.+...++
T Consensus       352 G~~l~~~~~~~~~~~~~~~~~~~~~~s~~-----~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i  426 (489)
T PRK10207        352 GMFLCSLGFLTAAAAGMWFADAQGLTSPW-----FIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA  426 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCccCHH-----HHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence            7676666654331    11111 111111     3455666777888889999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcc---ccccCc---cchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        370 ITCFTLIFIKNE---DAEGGK---LIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       370 g~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      |+.++..+-...   ....|.   ...+...|...++..+++.++.+...
T Consensus       427 g~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~  476 (489)
T PRK10207        427 AFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMV  476 (489)
T ss_pred             HHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998887632100   111110   11256677777766665555554433

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.94  E-value=2.2e-23  Score=199.25  Aligned_cols=371  Identities=13%  Similarity=0.051  Sum_probs=237.7

Q ss_pred             HHHhhhhhHhhhHh-h--cCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccchhHH
Q psy10432         30 SDWIQGPYVYKVYK-D--YGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSSDFYI  104 (440)
Q Consensus        30 ~~~~~~~~~~~~~~-~--~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~~~~~  104 (440)
                      +.....+.++...+ +  +|.+..+.+.+.........+..+++|+++|| +|||+++..+.++.+++ .+.+++++++.
T Consensus        25 ~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~  104 (475)
T TIGR00924        25 SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDL  104 (475)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhH
Confidence            34445666655544 4  89999999998888777777777899999999 89999999999999998 67778888889


Q ss_pred             HHHHHHHHHHHHhhhccccchhhhccccccccccchh---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHH
Q psy10432        105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEW---LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV  181 (440)
Q Consensus       105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~  181 (440)
                      ++++|++.|++.+...|...+.+.      |++|+++   |++++++.....++|..+||.+++++.+.+||  +..|.+
T Consensus       105 ~~~~~~l~g~g~g~~~~~~~~~~a------~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~--~~~f~~  176 (475)
T TIGR00924       105 IFYGLGTIAVGSGLFKANPSSMVG------KLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY--HVGFNL  176 (475)
T ss_pred             HHHHHHHHHhccccccCCHHHHHH------HhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh--HHHHHH
Confidence            999999999999998888777777      9988764   88899999999999999999999999998899  888877


Q ss_pred             HHHHHHHHHHHHHHhccccCC----CCCccCCCCccchhh----------------------------------------
Q psy10432        182 AIPFLLGSTLFIYFCWEEHYD----PKTAKSSLLPNSMFS----------------------------------------  217 (440)
Q Consensus       182 ~~~~~~~~~~~~~~~~~e~~~----~~~~~~~~~~~~~~~----------------------------------------  217 (440)
                      .+...++..+ .+...++..+    ++++.++++.+....                                        
T Consensus       177 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (475)
T TIGR00924       177 AAVGMVIGLL-TFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFF  255 (475)
T ss_pred             HHHHHHHHHH-HHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            6654443332 2323232211    111000000000000                                        


Q ss_pred             ------hhhhhccCc--chHHHHHHHHHHHhHHHHHHHhhhhhhhc-cC-------CchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        218 ------SLKFLFTNP--CLLTLGIVQSIYEGIMYTFIFVWTPVLEV-LS-------PPLGLVFSCFMISIMIGSKIYSIL  281 (440)
Q Consensus       218 ------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~g~~~~~~~~~~~~~~~~~g~l  281 (440)
                            ......+++  .+..+.+...+.+..+.-..+.++...++ .+       ...+++.+.+.+..++..++..++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~  335 (475)
T TIGR00924       256 RLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMI  335 (475)
T ss_pred             HHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHH
Confidence                  000000111  11222222223332222221212222111 11       236788888999888888776654


Q ss_pred             ----HhhccCCchhH--HHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchh
Q psy10432        282 ----ILKYFKPETML--TLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKA  355 (440)
Q Consensus       282 ----~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~  355 (440)
                          .||..+++...  .++.++..+++..+.......... ...+....+....+.+++.....|...++..+..|++.
T Consensus       336 ~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~-~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~  414 (475)
T TIGR00924       336 WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG-GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL  414 (475)
T ss_pred             HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence                33212223333  556666666655542110000000 00011145667777788888899999999999999999


Q ss_pred             hHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        356 RATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       356 ~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ||+.+|+......+|..+++.+.   ....+ ..++...|...++.+++..++.+...+
T Consensus       415 ~g~~~g~~~l~~~~g~~l~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (475)
T TIGR00924       415 MGQMLGMWFLAQAMGSLLGGYLA---TFGAV-PQGVTGVFGKIGLVTLLVGVVMALMVP  469 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---HHHhc-ccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999988744   22223 445666777777666666555544433

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.93  E-value=1.9e-23  Score=190.28  Aligned_cols=322  Identities=12%  Similarity=0.114  Sum_probs=226.3

Q ss_pred             hhhhHhhhHhhcCCChhh-HHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKN-IAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~-~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      .....|.+.+|+|+|+++ .|.   .+..+|++.++   +.|+++||+|.|+++..+.+.+++. .+.++++++..+.+.
T Consensus        45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qI---p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~  121 (511)
T TIGR00806        45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLV---PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM  121 (511)
T ss_pred             HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHH---HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444556667899999999 776   56667777776   9999999999999999999999998 788899999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhH-HHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPF-AVAIPFLL  187 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~-~~~~~~~~  187 (440)
                      |++.|++.|... +...++.      +++|+++|+++.++..++..+|.+++++++++ ...+||++-... ++......
T Consensus       122 R~llGvaEA~~~-A~~syI~------~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~  193 (511)
T TIGR00806       122 EVFYSVTMAARI-AYSSYIF------SLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMT  193 (511)
T ss_pred             HHHHHHHHHHHH-HHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHH
Confidence            999999999996 6666666      99999999999999999999999999999999 556688433222 33333333


Q ss_pred             HHHHHHHHhccccCC------CC----------Cc--cCCC--C---c--------cchhhhhhhhccCcchHHHHHHHH
Q psy10432        188 GSTLFIYFCWEEHYD------PK----------TA--KSSL--L---P--------NSMFSSLKFLFTNPCLLTLGIVQS  236 (440)
Q Consensus       188 ~~~~~~~~~~~e~~~------~~----------~~--~~~~--~---~--------~~~~~~~~~~~~~~~~~~~~~~~~  236 (440)
                       ..++..+++|..++      ++          +.  +++.  .   .        +.....++...+||.++...+-..
T Consensus       194 -~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa  272 (511)
T TIGR00806       194 -FSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWV  272 (511)
T ss_pred             -HHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHH
Confidence             34444556674332      00          00  0000  0   0        112334556678899888777777


Q ss_pred             HHHhHHHHHHHhhhhhhhcc-C---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhc
Q psy10432        237 IYEGIMYTFIFVWTPVLEVL-S---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS  312 (440)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~-~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (440)
                      +...+++-..++.+...+.. +   ...|..-++..+.+.+.++..|++-.+ +.+..-+.++.....-+.+++  +...
T Consensus       273 ~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~-w~~~~~l~l~v~s~~~~gll~--~m~~  349 (511)
T TIGR00806       273 FNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIR-WARWSKLLIAVVSAIQAGLVF--WMSQ  349 (511)
T ss_pred             HHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCC-chhhHHHHHHHHHHHHHHHhh--hhhc
Confidence            77777776666666555222 1   256777777788888889999998554 433223444443333333222  2222


Q ss_pred             cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        313 LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      .+..|      ....++.++...+.+..+....-+.+....|.-|.++|++++..-+-..+-..
T Consensus       350 t~~Iw------~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~  407 (511)
T TIGR00806       350 SHDIW------VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA  407 (511)
T ss_pred             ccchH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence            22222      56788888888888888888888888888888899999888877666665554

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.93  E-value=6.5e-23  Score=180.39  Aligned_cols=344  Identities=15%  Similarity=0.139  Sum_probs=251.8

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchh
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDF  102 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~  102 (440)
                      .+....+.+|.+.+.++++..|.+.   .+..+|....+   +.|++.||+|+|+.++.|+.+++++ .+.   +...++
T Consensus        28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~l---pa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y  104 (422)
T COG0738          28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSL---PAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSY  104 (422)
T ss_pred             HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc---cHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence            3556778888888999999999887   45556665555   9999999999999999999999999 444   355788


Q ss_pred             HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Q psy10432        103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI------------  170 (440)
Q Consensus       103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------------  170 (440)
                      ..++++-++.|.|.+...++.++++.      ...++++..+.+++.+..+++|.++||++++.+..+            
T Consensus       105 ~~FL~~lFila~Gi~~LetaaNp~v~------~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~  178 (422)
T COG0738         105 GFFLVALFILASGIGLLETAANPYVT------LLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQIL  178 (422)
T ss_pred             HHHHHHHHHHHhhhHHHHhccchHHH------HhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHH
Confidence            99999999999999999998888888      999999999999999999999999999999998773            


Q ss_pred             -------cccCchhhHHHHHHHHHHHHHHHH-HhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHH
Q psy10432        171 -------LNLGPIAPFAVAIPFLLGSTLFIY-FCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIM  242 (440)
Q Consensus       171 -------~gw~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (440)
                             -.|  ++++...+....+..+... ...||.++.++++.  +.+  .....+++++|+++...+..++.-+..
T Consensus       179 ~~~~~~~~~v--~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~--~~~--~~~~~~l~~~~~~~~gvl~~FlYVG~E  252 (422)
T COG0738         179 AIKGADASSV--QFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG--ASG--SAGLSSLFQNKHLRLGVLAIFLYVGAE  252 (422)
T ss_pred             HHHHHHHHhh--hhHHHHHHHHHHHHHHHHHhccCCcCCccccccc--ccc--cchHHHHHhChHHHHHHHHHHHHHhHH
Confidence                   125  7777777666654444332 22233332222211  111  115678899999999888888877776


Q ss_pred             HHHHHhhhhhhhc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchh
Q psy10432        243 YTFIFVWTPVLEV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRR  318 (440)
Q Consensus       243 ~~~~~~~~~~~~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (440)
                      ....+....+..+ .+   .+.+...+....+.++|+++..++.+| ++++|.+....+...+.++.. .+...   .  
T Consensus       253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~-~l~~g---~--  325 (422)
T COG0738         253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAV-ALIGG---V--  325 (422)
T ss_pred             HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHH-HHhcC---h--
Confidence            6655533333333 22   677888889999999999999999997 999998877765555544333 22211   1  


Q ss_pred             hcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHH
Q psy10432        319 VLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVC  398 (440)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (440)
                           ..+....+.++..+..+|...++..+..| +... ..|..-.+...|+++.|.+.   |.+.| ..+....+...
T Consensus       326 -----v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~maivGGAiiP~l~---G~i~d-~~g~~~~~~~~  394 (422)
T COG0738         326 -----VALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGAIIPPLQ---GVIAD-MFGIQLTFLIV  394 (422)
T ss_pred             -----HHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeeheecchHHHHHH---HHHHH-hhhhHHHHHHH
Confidence                 24555556677799999999999999988 3333 33445555668888999866   88888 77777766644


Q ss_pred             HHHHHHHH
Q psy10432        399 TACLLVAL  406 (440)
Q Consensus       399 ~~~~~~~~  406 (440)
                      ...+.+-+
T Consensus       395 pllc~lyV  402 (422)
T COG0738         395 PLLCYLYV  402 (422)
T ss_pred             HHHHHHHH
Confidence            44444433

>KOG2533|consensus

Probab=99.93  E-value=5.2e-24  Score=199.61  Aligned_cols=341  Identities=14%  Similarity=0.133  Sum_probs=237.0

Q ss_pred             hhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ..+.+..+.+|.+....+.+.   ++.++|+++++   ++|.+.||++-.+.+....+++++- ++....+|++.+++.|
T Consensus        65 ~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~---p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr  141 (495)
T KOG2533|consen   65 VNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQF---PSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALR  141 (495)
T ss_pred             hhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHh---hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            333443455777777777665   77777777776   9999999999888888888887776 5666699999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------hcccCchhhHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD------ILNLGPIAPFAVAI  183 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~gw~~~~~~~~~~  183 (440)
                      ++.|+.++...|....++.      .|+.++||++.++++.+..++|.++|++++..+.+      ..||  |+.|++.+
T Consensus       142 ~llGl~es~~wP~~~~~lg------~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW--~~~FiI~G  213 (495)
T KOG2533|consen  142 FLLGLFESGGWPGVVAILG------NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGW--RWLFIIEG  213 (495)
T ss_pred             HHHHHHhcccchHHHHHHH------hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCc--eeehhHHH
Confidence            9999999999998888888      99999999999999999999999999999988743      4588  99999999


Q ss_pred             HHHHHHHHHHHHhccccCCCCC-----c--------c----CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKT-----A--------K----SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI  246 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~-----~--------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (440)
                      ++.++..++.++.+|+.|.+.+     +        +    +....+..+.++++.+++|++|.+.+..++.....+.+.
T Consensus       214 ~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~  293 (495)
T KOG2533|consen  214 VITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS  293 (495)
T ss_pred             HHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH
Confidence            9999888888888998775211     0        0    000011234567888999999999999999988888775


Q ss_pred             Hhhhhhh-hc---c-CCchhhHHHHHHHHHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHHHHHhhhccccchhh
Q psy10432        247 FVWTPVL-EV---L-SPPLGLVFSCFMISIMIGSKIYSILILKYFK--PETMLTLTVYLATFSITVSTVLTSSLFDSRRV  319 (440)
Q Consensus       247 ~~~~~~~-~~---~-~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (440)
                      + |.|.+ +.   + ..+...+..+..++++++.++.|.++|| .+  ..+......................... .  
T Consensus       294 ~-~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~-~--  368 (495)
T KOG2533|consen  294 Y-WLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR-LKTIFARRLLFIVFLCLYAIIGAISLLAAAVL-P--  368 (495)
T ss_pred             H-HHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-h--
Confidence            5 66666 33   2 3677888899999999999999999997 64  2222222222222222221111111111 1  


Q ss_pred             cchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch-hhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHH
Q psy10432        320 LSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK-ARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVV  397 (440)
Q Consensus       320 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~-~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (440)
                          .....+.......+...+......++....+ ++-+..+......+.++.++|.++ . ..... .+.+...|..
T Consensus       369 ----~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~-~-~~~ap-~y~~~~~f~~  440 (495)
T KOG2533|consen  369 ----GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF-R-SLDAP-RYGWGAVFYM  440 (495)
T ss_pred             ----HHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc-c-cccCc-chhhhhHHHH
Confidence                1122222222233445556666666665544 444556666666777777777744 2 33344 5566666633

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.93  E-value=1.3e-22  Score=187.92  Aligned_cols=374  Identities=17%  Similarity=0.165  Sum_probs=252.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-hhHHHHHHhHHHHHh-hhh
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-RKLICISYGIVYTLC-CLT   96 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-rr~~l~~~~~~~~~~-~~~   96 (440)
                      |....++..++......|+.+...++.|.|.+|+|.+.+++.....+..|++|.++||++ +||.+.+..++.++. ...
T Consensus         6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~   85 (400)
T PF03825_consen    6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL   85 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence            344555566666666889997777999999999999999999999998999999999986 577777776766666 456


Q ss_pred             cccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCc
Q psy10432         97 KFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFT-AHFFADILNLGP  175 (440)
Q Consensus        97 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~gw~~  175 (440)
                      ...++++.++...++..+......|..++...      +...  ++++-.|.....+++|.+++... ++.+....++..
T Consensus        86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~------~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~  157 (400)
T PF03825_consen   86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIAL------SYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISG  157 (400)
T ss_pred             HHhccHHHHHHHHHHHHHHHccHHHHHHHHHH------HHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhcccc
Confidence            67788988888888888887777777776666      5543  45667777788888888777554 333444433321


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh
Q psy10432        176 -IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE  254 (440)
Q Consensus       176 -~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (440)
                       ...+++......+... ..+.+|+.+++++.+++ .++...++..+++|||+++...+..++.......+.++...+++
T Consensus       158 ~~~~~~i~~~~~~ll~~-~~l~lp~~~~~~~~~~~-~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~  235 (400)
T PF03825_consen  158 TSLIFYIAAILSLLLAG-FALFLPKTPPKRSAKES-VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQ  235 (400)
T ss_pred             ccHHHHHHHHHHHHHHH-HHHhCCCCccccccCCC-cccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             2344444443332222 23356776633332221 11222233457899999998888877777666666554555554


Q ss_pred             ccC----CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHH
Q psy10432        255 VLS----PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFL  330 (440)
Q Consensus       255 ~~~----~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (440)
                      +.+    ...+..++...++.++.-...+++.+| ++.++.+.++.+..++=..+. .....+......    ....+..
T Consensus       236 ~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~-a~~~~~~~~~~~----~~~l~q~  309 (400)
T PF03825_consen  236 ELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLY-AYFSDPWPFIVA----LQLLGQL  309 (400)
T ss_pred             HcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH-HHhcCCcHHHHH----HHHHHHh
Confidence            433    556777888889999999999999997 999999999888877766544 222111100111    1222233


Q ss_pred             HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhh-hhhHHHHHHHHhhccccccCccchhhH------HHHHHHHHHH
Q psy10432        331 IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP-TNFITCFTLIFIKNEDAEGGKLIAIHS------VFVVCTACLL  403 (440)
Q Consensus       331 ~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  403 (440)
                      +.+..++........++++.+|++.|+++.++++.. ..+|..+|..  .+ |.+.| ..+.+.      .+.+++++.+
T Consensus       310 lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~--ig-G~l~~-~~g~~~~~~~~~~~~v~a~~~~  385 (400)
T PF03825_consen  310 LHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSL--IG-GWLYD-AFGARGMFDWSAVFLVFAVMAL  385 (400)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHH--HH-HHHHH-HhcchhhhhHHHHHHHHHHHHH
Confidence            566778888888999999999999999999998875 5688888888  45 77777 555443      4444554444


Q ss_pred             HHHHHHHHh
Q psy10432        404 VALLASCVF  412 (440)
Q Consensus       404 ~~~~~~~~~  412 (440)
                      +..++....
T Consensus       386 ~~~~~f~~~  394 (400)
T PF03825_consen  386 VILVLFVIL  394 (400)
T ss_pred             HHHHHHHhh
Confidence            444444333

>KOG2504|consensus

Probab=99.93  E-value=2.1e-23  Score=197.68  Aligned_cols=357  Identities=14%  Similarity=0.130  Sum_probs=265.4

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHH-HHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLY-GRLF  111 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~-~r~l  111 (440)
                      .+.+.+.+.++++.+.++++|+.++......+.+|+.+.+.||+|.|++.+.|.++.+++ .+..+++++|++++ .-++
T Consensus        65 ~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi  144 (509)
T KOG2504|consen   65 FGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVI  144 (509)
T ss_pred             ehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            445566777999999999999999999999999999999999999999999999999999 78999999998865 5688


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      .|+|.++.+......+.      .++ +++|+.+.|+...+.++|.++-|.+...+.+.+||  |..+++...+.+-...
T Consensus       145 ~G~G~~~~~~paiviv~------~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~--r~~~l~~~~~~l~~~~  215 (509)
T KOG2504|consen  145 GGLGLGLIYLPAVVILG------TYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW--RGALLIFGGISLNVLV  215 (509)
T ss_pred             hhccchhhhcchhhhhh------hHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHH
Confidence            99999998665444443      555 78999999999999999999999999999999999  7777766666654444


Q ss_pred             HHHHhccccCCC----------------------------CCcc-C-------------CCCcc--chhhhh----hhhc
Q psy10432        192 FIYFCWEEHYDP----------------------------KTAK-S-------------SLLPN--SMFSSL----KFLF  223 (440)
Q Consensus       192 ~~~~~~~e~~~~----------------------------~~~~-~-------------~~~~~--~~~~~~----~~~~  223 (440)
                      .....-|..++.                            ++.. .             +.+.+  ..+...    .+++
T Consensus       216 ~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll  295 (509)
T KOG2504|consen  216 AGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLL  295 (509)
T ss_pred             HHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHH
Confidence            444444411110                            0000 0             00000  111222    4778


Q ss_pred             cCcchHHHHHHHHHHHhHHHHHHHhhhhhhhcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchh--HHHHHHH
Q psy10432        224 TNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETM--LTLTVYL  298 (440)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~  298 (440)
                      ++|.++.+.+...+...+.+......+++.+..   ..+.+.+.+..++..++++++.|++.|+ ...++.  ...+.+.
T Consensus       296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~  374 (509)
T KOG2504|consen  296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLI  374 (509)
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHH
Confidence            899999988888888888877666555555433   3788899999999999999999999997 553333  3333333


Q ss_pred             HHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        299 ATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ..++....   ....+  + .    .......+++++.|.........+.+.++.++-..++|+...+..++..++|.+.
T Consensus       375 ~gl~~~~~---p~~~~--~-~----~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia  444 (509)
T KOG2504|consen  375 AGLARLFL---PFATT--Y-V----GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA  444 (509)
T ss_pred             HHHHHHHH---HHhcc--H-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccc
Confidence            33333111   11111  1 1    3444445677778888888888899999999999999999999999999999944


Q ss_pred             hccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        379 KNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                         |.+.|...+|...|..++++.+++..+....+
T Consensus       445 ---g~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  445 ---GLLYDITGNYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             ---eeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence               77778455599999999999998887766655

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.93  E-value=2.7e-22  Score=173.85  Aligned_cols=351  Identities=13%  Similarity=0.098  Sum_probs=259.9

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      -+..+|.++++.+|+|+|.+..|.+.++..+...+++|+..+++.|+|.++.+..++++.+++ .+-... +.+.++.+-
T Consensus        28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt  106 (395)
T COG2807          28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGT  106 (395)
T ss_pred             hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHH
Confidence            345789999999999999999999999999999999999999999999999999999999999 444444 788899999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~  188 (440)
                      .+.|.|.+....      ....++++.+| ++-+..+|++....++|..+++.+.-.+.++. ||  +.....-+...++
T Consensus       107 ~l~G~gIav~nV------LLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW--~~aL~~WAl~all  177 (395)
T COG2807         107 LLAGAGIAVINV------LLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGW--RGALGFWALLALL  177 (395)
T ss_pred             HHHHhhHHHHHH------hhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccH--HHHHHHHHHHHHH
Confidence            999999999844      44455558875 57899999999999999999999999999887 68  5554444444332


Q ss_pred             HHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHH
Q psy10432        189 STLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFS  265 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~  265 (440)
                      . ++.  ++|...+++..+.    +....+...++|||..|.+.+...+....+|..+...++++.+.|   .+.|.+.+
T Consensus       178 A-l~~--WlPq~~r~~~~~~----~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~lls  250 (395)
T COG2807         178 A-LLI--WLPQALREQAASI----ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLS  250 (395)
T ss_pred             H-HHH--Hhhhccccccccc----ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHH
Confidence            2 222  3455322211110    111123346899999999999999999999988775566664444   88899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHh
Q psy10432        266 CFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGY  345 (440)
Q Consensus       266 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  345 (440)
                      ...+..+..++....+.+|+.++|........++.++.+++.+.   +...       ...+ ..+.+.+.|..+|....
T Consensus       251 l~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~---P~~~-------~~lw-~~llG~G~G~~F~laL~  319 (395)
T COG2807         251 LMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA---PGQL-------PILW-ALLLGLGQGGAFPLALT  319 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---hhhH-------HHHH-HHHHhCccchHHHHHHH
Confidence            99999999999999999973445555566666666666666221   1111       1222 34556667788886666


Q ss_pred             HhccCC-cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        346 LRGRII-PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       346 ~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ++.+.. ++++.++..|+.+..+++-...||.++   |.+.|...+|+..+.......+...+.-+..
T Consensus       320 li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~---G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a  384 (395)
T COG2807         320 LILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLF---GFLHDATGSWSAPLVLLALATLLMLIFGLRA  384 (395)
T ss_pred             HHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhH---hHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence            665554 456778889999999999999999976   7788866677777777766665555444433

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.92  E-value=3.2e-22  Score=192.29  Aligned_cols=366  Identities=14%  Similarity=0.071  Sum_probs=223.1

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccc-hhHHHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSS-DFYILLYGR  109 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~-~~~~l~~~r  109 (440)
                      ..++++... +++|.+.++.++.+...........+++|+++|| +|||+.++.+.++.+++ .++++++ +.+.++++|
T Consensus        40 ~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~  119 (500)
T PRK09584         40 LQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGM  119 (500)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            444443333 7899999888776655444444444689999999 59999999999999988 6666664 566777889


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEW--LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      +++|++.|...|...+.+.      |++|+++  |..++++.+.+.++|..+||.+++++.+++||  ++.|.+..+...
T Consensus       120 ~l~gig~g~~~~~~~~l~~------~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~--~~~F~i~~i~~~  191 (500)
T PRK09584        120 ATIAVGNGLFKANPSSLLS------TCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGW--SVAFALSVVGML  191 (500)
T ss_pred             HHHHHhhhcccCCHHHHHH------HhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHH
Confidence            9999999998787777777      9987653  45688999999999999999999999999999  888877665433


Q ss_pred             HHHH---HHHHhccccCCCCCccCCCCccch----------------------------------------hhh--hhhh
Q psy10432        188 GSTL---FIYFCWEEHYDPKTAKSSLLPNSM----------------------------------------FSS--LKFL  222 (440)
Q Consensus       188 ~~~~---~~~~~~~e~~~~~~~~~~~~~~~~----------------------------------------~~~--~~~~  222 (440)
                      +..+   .....++|..+++++++ .+....                                        .+.  .++.
T Consensus       192 i~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (500)
T PRK09584        192 ITVVNFAFCQRWVKQYGSKPDFEP-INYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGA  270 (500)
T ss_pred             HHHHHHHHhHHHhccCCCCCCccc-cchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence            3222   22333444321111100 000000                                        000  0001


Q ss_pred             ccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh----c-c-----C--CchhhHHHHHHHHHHHHHHHHHHHHhh---ccC
Q psy10432        223 FTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE----V-L-----S--PPLGLVFSCFMISIMIGSKIYSILILK---YFK  287 (440)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----~--~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~  287 (440)
                      -+ ++.+.... .++....++......+..+.    . .     +  ...+.+.+...+..++..++.+++.+|   |.+
T Consensus       271 ~~-~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~  348 (500)
T PRK09584        271 AR-RKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLP  348 (500)
T ss_pred             HH-HHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCC
Confidence            11 12222111 11222222222232333321    1 1     1  236677777887777777776544443   155


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhh
Q psy10432        288 PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT  367 (440)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~  367 (440)
                      ..+.+.+++.+.+++++.+.......+..... .....+....+.+++.+...|...+++.+..|++.||+++|......
T Consensus       349 ~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~v-s~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~  427 (500)
T PRK09584        349 MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIV-SVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTT  427 (500)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            56677788888888776652221111100000 00135566667778888899999999999999999999999888777


Q ss_pred             hhHHHHHHHHhhc---cccccCc---cchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        368 NFITCFTLIFIKN---EDAEGGK---LIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       368 ~~g~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      .+|..++..+...   +....+.   ..++...|...++..++..++.+.
T Consensus       428 a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~  477 (500)
T PRK09584        428 AGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL  477 (500)
T ss_pred             HHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            7777666553310   0111111   123677887777666544444333

>KOG0569|consensus

Probab=99.92  E-value=6.7e-23  Score=189.50  Aligned_cols=351  Identities=16%  Similarity=0.179  Sum_probs=230.8

Q ss_pred             hhcC--CChhhHHH-------HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhcccchhHHHHHHH
Q psy10432         43 KDYG--YDEKNIAL-------LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFSSDFYILLYGR  109 (440)
Q Consensus        43 ~~~g--~s~~~~~~-------~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~~~~~~l~~~r  109 (440)
                      +.+|  .++++...       ++.+|.+++.+   ..|.++||+|||..+.++.++..++ +   .+...+++++++++|
T Consensus        47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~---~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR  123 (485)
T KOG0569|consen   47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSF---SSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGR  123 (485)
T ss_pred             HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            5566  44444443       45555555555   9999999999999999988887776 3   345568899999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH--HHhhcccCchhhHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHF--FADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      ++.|+..+.......-++.      |..|++.||..-...+.+..+|..+|..++.-  +-+.-.|  .+.+....+..+
T Consensus       124 ~i~Gl~~gl~~~~~pmyl~------E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W--~~l~~~~~i~~~  195 (485)
T KOG0569|consen  124 LIVGLACGLSTGLVPMYLT------EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLW--PYLLAFPLIPAL  195 (485)
T ss_pred             HHHHHHhHHHHHHHHHHHh------hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcch--HHHHHHHHHHHH
Confidence            9999999998665555666      99999999999999999999999999776632  2223346  555555555544


Q ss_pred             HHHHHHHHhccccCCC-----CCcc------------C--CC-------------CccchhhhhhhhccCcchHHHHHHH
Q psy10432        188 GSTLFIYFCWEEHYDP-----KTAK------------S--SL-------------LPNSMFSSLKFLFTNPCLLTLGIVQ  235 (440)
Q Consensus       188 ~~~~~~~~~~~e~~~~-----~~~~------------~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~  235 (440)
                      +. ++...++||+|+-     ++++            +  +.             ..++...+++++++||..+.-....
T Consensus       196 ~~-l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~  274 (485)
T KOG0569|consen  196 LQ-LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIG  274 (485)
T ss_pred             HH-HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHH
Confidence            43 3445678999860     0000            0  00             0000122466788887766632222


Q ss_pred             HH-----HHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH
Q psy10432        236 SI-----YEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVST  307 (440)
Q Consensus       236 ~~-----~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~  307 (440)
                      ..     ...+.+....+...++...|   .++-+.....++...+.++++.++.|| .|||+.+..+..++.+..+.+.
T Consensus       275 ~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~~~~~  353 (485)
T KOG0569|consen  275 IVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVALLLMS  353 (485)
T ss_pred             HHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHH
Confidence            11     22222223233334444444   556777888889999999999999997 9999999999988888776663


Q ss_pred             Hhhhcccc--chhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccc
Q psy10432        308 VLTSSLFD--SRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAE  384 (440)
Q Consensus       308 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~  384 (440)
                      ......+.  .|..   -..+....++.+.++. ..|..+-+.+|.+|++.|.++.++...+..+...+....+   -.+
T Consensus       354 ~~~~l~~~~~~~~~---y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~f---p~l  427 (485)
T KOG0569|consen  354 IALFLSNSFGSWLS---YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAF---PPL  427 (485)
T ss_pred             HHHHHHHHhhhHHH---HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence            33221111  1211   0123344445555555 4788999999999999999999999999988888777654   223


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHH-Hhhh
Q psy10432        385 GGKLIAIHSVFVVCTACLLVALLASC-VFKR  414 (440)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  414 (440)
                      .+ ..|. ..|+...+.+.+..+..+ .+++
T Consensus       428 ~~-~~g~-~~filF~i~~~~~~i~~~~~lPE  456 (485)
T KOG0569|consen  428 QN-VIGP-YVFILFVIPLAIFLIYLYRYLPE  456 (485)
T ss_pred             HH-Hhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence            34 4453 566666665555555444 3444

>KOG2615|consensus

Probab=99.92  E-value=7.9e-24  Score=183.64  Aligned_cols=327  Identities=16%  Similarity=0.145  Sum_probs=205.5

Q ss_pred             HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccc
Q psy10432         55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLN  133 (440)
Q Consensus        55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~  133 (440)
                      +-+...+...+.+|.+|.++||+|||++++.|+...++. .+.+.+.|+..+.++|++.|+..+.. ..      .++++
T Consensus        73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v------~rAii  145 (451)
T KOG2615|consen   73 LGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SV------IRAII  145 (451)
T ss_pred             HhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HH------HHHHH
Confidence            333333444444589999999999999999999999999 79999999977777899999999886 33      45555


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hcccCchhhHHH----HHHHHHHHHHHHHHhccccCCCCCc
Q psy10432        134 YYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD---ILNLGPIAPFAV----AIPFLLGSTLFIYFCWEEHYDPKTA  206 (440)
Q Consensus       134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~gw~~~~~~~~----~~~~~~~~~~~~~~~~~e~~~~~~~  206 (440)
                      +|.+++|+|+++++..+...++|.++||.+||++.+   ..|   ..+|..    ..+....-.....+++||+-+.+++
T Consensus       146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g---~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~  222 (451)
T KOG2615|consen  146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG---SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR  222 (451)
T ss_pred             HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc---cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence            599999999999999999999999999999999988   222   223322    2222222123345578998665444


Q ss_pred             cCCCC-ccchhh------h-----hhhhccCcchHHHHHHH------HHHHhHHHHHHHhhhhhh--hc---cCCchhhH
Q psy10432        207 KSSLL-PNSMFS------S-----LKFLFTNPCLLTLGIVQ------SIYEGIMYTFIFVWTPVL--EV---LSPPLGLV  263 (440)
Q Consensus       207 ~~~~~-~~~~~~------~-----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~---~~~~~g~~  263 (440)
                      .++.. ..+..+      .     .-...||+.........      -+.+...+.......+.+  +.   ...+.|.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v  302 (451)
T KOG2615|consen  223 NDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV  302 (451)
T ss_pred             cccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence            31111 000000      0     11234454433311111      111222222222233333  22   22778888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhh
Q psy10432        264 FSCFMISIMIGSKIYSILILKYFK--PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP  341 (440)
Q Consensus       264 ~~~~~~~~~~~~~~~g~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  341 (440)
                      ++..++.+.+.+....+..+| .+  .+..+.....++.-..+.+ .   ....+  .    ....+..+..++.....+
T Consensus       303 l~~tGl~m~~~ql~~~~~l~~-~~~~~~a~l~~~l~~~vP~~lll-s---~~~~~--~----~l~~~s~l~sf~~A~~vt  371 (451)
T KOG2615|consen  303 LSTTGLLMLVIQLALVPILPR-YKGNIKAVLLFSLLLIVPAFLLL-S---LARTP--V----VLYLGSTLKSFSTASVVT  371 (451)
T ss_pred             eehhhHHHHHHHHhccccccc-cccchhhHHHHHHHHHHHHHHHH-h---ccccc--h----hhhHHHHHHHHHHHHhhH
Confidence            888888888777777777775 33  2223333333332222222 1   11111  1    345555666677777889


Q ss_pred             hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432        342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA  405 (440)
Q Consensus       342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (440)
                      ....++.+..|+++||+++|+.+..+.++.++||.  .+ |....+..+-+..+...+.+.+.+
T Consensus       372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPl--v~-g~i~~Ws~~~~~a~~~~~~L~~~~  432 (451)
T KOG2615|consen  372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPL--VS-GVIFSWSQGAQPAYIAWGALLLIP  432 (451)
T ss_pred             HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhh--hh-heeEEEecCCCceeeehHHHHHHH
Confidence            99999999999999999999999999999999999  34 555443333344444444444444

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.92  E-value=5.5e-22  Score=190.40  Aligned_cols=338  Identities=12%  Similarity=0.072  Sum_probs=218.1

Q ss_pred             HHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHH-HHHHhHHHHHh-hhhccc
Q psy10432         27 ATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLI-CISYGIVYTLC-CLTKFS   99 (440)
Q Consensus        27 ~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~-l~~~~~~~~~~-~~~~~~   99 (440)
                      ..+...+..++++..+ +.+|+++.++|.++.+..+...+..|+.|.++|    |+||||. ++.+....+++ .++...
T Consensus        18 ~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~   97 (473)
T PRK10429         18 KDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA   97 (473)
T ss_pred             HhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC
Confidence            3344555667775666 557999999999999999999999999999999    6698554 55677777776 443332


Q ss_pred             ch------hHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10432        100 SD------FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN  172 (440)
Q Consensus       100 ~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g  172 (440)
                      ++      +..+++..++.+++.........++..      |.. +++||.+..++...+.++|..+.+.+...+.+.+|
T Consensus        98 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~------~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g  171 (473)
T PRK10429         98 HLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVP------TLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG  171 (473)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhH------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            21      334556667778888777665555665      888 68899999999888888876666665554433332


Q ss_pred             c-----CchhhHHHHHHHHHHHHHHHHHhccccCCCCCc-cCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHH
Q psy10432        173 L-----GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA-KSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI  246 (440)
Q Consensus       173 w-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (440)
                      .     .++....+.+++..+..+..++..||++++++. ++++++.+.++.++.+++||.++......++.........
T Consensus       172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~  251 (473)
T PRK10429        172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIIN  251 (473)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence            1     014344444444444444445556776432211 1111234567778888899988887777666665554443


Q ss_pred             Hhhhhhh-hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcch
Q psy10432        247 FVWTPVL-EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLST  322 (440)
Q Consensus       247 ~~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (440)
                      . ..+++ +..   ....+.......++.+++.++.+++.|| +|+|+.+..+..+..++.+.+............    
T Consensus       252 ~-~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  325 (473)
T PRK10429        252 G-FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL----  325 (473)
T ss_pred             h-heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH----
Confidence            3 33344 222   1345556666678889999999999997 999999887776655554443221111111111    


Q ss_pred             hHHHHHHHHHHHhhhchhhhHHhHhccCCc-------chhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432        323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIP-------EKARATITNWLRVPTNFITCFTLIF  377 (440)
Q Consensus       323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~  377 (440)
                       ..++...+.+++.+...+...+++.|..|       .+..|..+|...+...++..+++.+
T Consensus       326 -~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i  386 (473)
T PRK10429        326 -LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF  386 (473)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence             23333344556677777777888888865       3345668999999999988888764

>PRK09669 putative symporter YagG; Provisional

Probab=99.92  E-value=1.6e-21  Score=185.98  Aligned_cols=323  Identities=12%  Similarity=0.083  Sum_probs=210.6

Q ss_pred             hhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc----cchhHH-HHHHhHHHHHh-hhhcccch----
Q psy10432         33 IQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK----FGRKLI-CISYGIVYTLC-CLTKFSSD----  101 (440)
Q Consensus        33 ~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~-l~~~~~~~~~~-~~~~~~~~----  101 (440)
                      ....+++..+ +++|+|+.++|.++.+..+...+..|+.|.++||    +||||. ++.+.+..+++ .+....++    
T Consensus        27 ~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~  106 (444)
T PRK09669         27 TVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGAT  106 (444)
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcc
Confidence            3445554555 7799999999999999999999999999999998    787555 55566666665 33333332    


Q ss_pred             --hHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------
Q psy10432        102 --FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-------  171 (440)
Q Consensus       102 --~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------  171 (440)
                        +..+++..++.+.+.........++..      |+. +++||.+..++......+|..+++.+...+...+       
T Consensus       107 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~------~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~  180 (444)
T PRK09669        107 GKIIYACVTYILLSLVYTAINVPYCAMPG------AITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQK  180 (444)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcchHHHhHH------HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence              455566666777776666554445555      877 5678999999999888888888877665554433       


Q ss_pred             ccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432        172 NLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP  251 (440)
Q Consensus       172 gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (440)
                      +|  +..+.+.+++..+..+..++..+|++++++ +   ++.+.++.++.++|||.++.......+......... ...+
T Consensus       181 g~--~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~-~---~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~-~~~~  253 (444)
T PRK09669        181 GY--FYAMMVMGLLGVVLFFCCFFMTKERYTPEV-D---NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRG-GATL  253 (444)
T ss_pred             hH--HHHHHHHHHHHHHHHHHHhCCeEEecCCCC-c---CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh-hhhh
Confidence            34  555555555555444444555566533221 1   223456778889999998887666555444443222 2333


Q ss_pred             hh-hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        252 VL-EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       252 ~~-~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      ++ +..   +...+.......+..+++.++.+++.|| +++|+....+.....+....+...  .++..+      ...+
T Consensus       254 y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~  324 (444)
T PRK09669        254 YYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFI--PPSNVW------LIFA  324 (444)
T ss_pred             eeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHh--CcchHH------HHHH
Confidence            33 211   1233445555567778888999999998 999998887766555433322121  111111      2344


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcc-------hhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPE-------KARATITNWLRVPTNFITCFTLIF  377 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~~~~~  377 (440)
                      ...+.+++.+...+..++++.|..+.       +..|..+|..+....+|..+++.+
T Consensus       325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i  381 (444)
T PRK09669        325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV  381 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence            44566677788888888999888752       245677888888888888888764

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.90  E-value=3.1e-20  Score=174.06  Aligned_cols=379  Identities=12%  Similarity=0.062  Sum_probs=249.2

Q ss_pred             HHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHHHHHH-hHHHHHh-hhhccc
Q psy10432         26 LATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLICISY-GIVYTLC-CLTKFS   99 (440)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~-~~~~~~   99 (440)
                      ...++..+..++++++.+++|.+..+.+.+..++.+.+.+.+|+.|+++|    |+||||.++.+ .....++ .+..++
T Consensus        15 Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~   94 (477)
T TIGR01301        15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA   94 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence            33344666777887878999999999999999999999999999999999    59999998775 5555555 456665


Q ss_pred             chhH-----------------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhh--hHHHHHHHHHHHHHHHHH
Q psy10432        100 SDFY-----------------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL--NLTFARATFGSGLFAIVS  160 (440)
Q Consensus       100 ~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g  160 (440)
                      ++.+                 .++++-.+..++.....+...+++.      |.+|+++|  +.++++.+...++|.++|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALia------Dl~p~~~~~~~~a~~~~~~~~~lG~ilg  168 (477)
T TIGR01301        95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLA------DLTGGDARRTRIANAYFSFFMAIGNVLG  168 (477)
T ss_pred             chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            5542                 2233333444566666554444545      99999865  579999999999999999


Q ss_pred             HHHHHHH--Hhhcc-----------cCchhhHHHHHHHHHHHHHHHHHhccccCCCCCcc------CCCCc----cchhh
Q psy10432        161 GFTAHFF--ADILN-----------LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAK------SSLLP----NSMFS  217 (440)
Q Consensus       161 ~~~~~~l--~~~~g-----------w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~------~~~~~----~~~~~  217 (440)
                      +.+++..  .+.++           .+.+..|++.++..++..++..+..||.+..++++      ++.+.    +..++
T Consensus       169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (477)
T TIGR01301       169 YAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGE  248 (477)
T ss_pred             HHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHH
Confidence            9999875  23221           23477888888888888888888889875421110      00011    11122


Q ss_pred             hhhhhccC-cchHHHHHHHHHHHhHHHHHHHhhhhhhh--ccC---------Cc----hhhHHHHHHHHHHHHHHHHHHH
Q psy10432        218 SLKFLFTN-PCLLTLGIVQSIYEGIMYTFIFVWTPVLE--VLS---------PP----LGLVFSCFMISIMIGSKIYSIL  281 (440)
Q Consensus       218 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~----~g~~~~~~~~~~~~~~~~~g~l  281 (440)
                      -++.+.+- |.++.+++.+++.+.+.+.+..+.++.++  .++         ++    ..+....+.+...+.+++..++
T Consensus       249 i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l  328 (477)
T TIGR01301       249 LFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKL  328 (477)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            23333333 45677899999999999888776666652  221         01    2234455556666777888899


Q ss_pred             HhhccCC-chhHHHHHHHHHHHHHHHHHhhhccc---c-----chhhcc---hhHHHHHHHHHHHhhhchhhhHHhHhcc
Q psy10432        282 ILKYFKP-ETMLTLTVYLATFSITVSTVLTSSLF---D-----SRRVLS---TNLCFVAFLIYEISVGMYCPVTGYLRGR  349 (440)
Q Consensus       282 ~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~  349 (440)
                      .+| +++ |+....+.++.++++..........+   .     ....|.   ....+..+...++.....+...++++++
T Consensus       329 ~~~-~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~  407 (477)
T TIGR01301       329 CRG-WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASI  407 (477)
T ss_pred             HHH-hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHH
Confidence            997 985 55557777777776665533321100   0     000000   0134555556666777788888899999


Q ss_pred             CCcc--hhhHHHHHHhhhhhhhHHHHHHHHhhccccccCc-cchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        350 IIPE--KARATITNWLRVPTNFITCFTLIFIKNEDAEGGK-LIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       350 ~~p~--~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ..|+  +..|..+|+.|.+..+...+.....   |...+. ..+....+.+.++..+++.+..+....
T Consensus       408 ~~~~~~~~~G~~mgilN~~I~lpQii~sl~~---g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~  472 (477)
T TIGR01301       408 RSSNLGAGQGLSMGVLNLAIVIPQIIVSLGS---GPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP  472 (477)
T ss_pred             HccccCCCCcchhhHHHHHHHHHHHHHHHHH---HHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence            9885  4669999999999988888777632   222110 113466778888888887777665433

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>KOG0254|consensus

Probab=99.89  E-value=3.9e-21  Score=186.20  Aligned_cols=310  Identities=12%  Similarity=0.086  Sum_probs=205.7

Q ss_pred             HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhcc
Q psy10432         52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNE  130 (440)
Q Consensus        52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~  130 (440)
                      .+++.+.-.+...+.+++.|+++|++|||+.++++.+.+.++ +++++++|+++++++|+++|+|.|........++.  
T Consensus        91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s--  168 (513)
T KOG0254|consen   91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS--  168 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh--
Confidence            356555555555555569999999999999999999999999 89999999999999999999999999654444444  


Q ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCc---
Q psy10432        131 HLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA---  206 (440)
Q Consensus       131 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---  206 (440)
                          |..|++.||...+..+....+|..++..++....+. .+|  |..+.+..+..++..+. .++.||+|+.--+   
T Consensus       169 ----Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~W--r~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~  241 (513)
T KOG0254|consen  169 ----EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGW--RIPLGLALIPAVILALG-MLFLPESPRWLIEKGR  241 (513)
T ss_pred             ----hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccH--HHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCC
Confidence                999999999999999999999999996555554433 356  88888877777766666 7788998751000   


Q ss_pred             ------------c-CCCCccchhh-----------------hhhhhccCcchHH-----HHHHHHHHHhHHHHHHHhhhh
Q psy10432        207 ------------K-SSLLPNSMFS-----------------SLKFLFTNPCLLT-----LGIVQSIYEGIMYTFIFVWTP  251 (440)
Q Consensus       207 ------------~-~~~~~~~~~~-----------------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  251 (440)
                                  . ++.+.+...+                 .++.+++ |....     ..+..+....+......+.+.
T Consensus       242 ~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~  320 (513)
T KOG0254|consen  242 LEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTT  320 (513)
T ss_pred             hHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHH
Confidence                        0 0000000000                 0122222 22222     222222222222222233333


Q ss_pred             hhhccCCc-h-hhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcccc------chhhcchh
Q psy10432        252 VLEVLSPP-L-GLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFD------SRRVLSTN  323 (440)
Q Consensus       252 ~~~~~~~~-~-g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  323 (440)
                      +++..+.. . .......++...++..+...+.|| .|||+.+..+...+.++.+.+.........      ....    
T Consensus       321 if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~----  395 (513)
T KOG0254|consen  321 IFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGW----  395 (513)
T ss_pred             HHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhH----
Confidence            44444422 2 455566667778888888999998 999999999999988888766433222111      1111    


Q ss_pred             HHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        324 LCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       324 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ..+...+++...+.. ..|..+.+..|.+|.+.|+++.++..........+-..
T Consensus       396 ~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~  449 (513)
T KOG0254|consen  396 LAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF  449 (513)
T ss_pred             HHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence            223333333333333 45677788899999999999999999888887766654

>PRK09848 glucuronide transporter; Provisional

Probab=99.89  E-value=3.2e-20  Score=177.43  Aligned_cols=329  Identities=11%  Similarity=-0.007  Sum_probs=200.7

Q ss_pred             HHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccccc----chhHHH-HHHhHHHHHh-h-hhc--
Q psy10432         28 TFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF----GRKLIC-ISYGIVYTLC-C-LTK--   97 (440)
Q Consensus        28 ~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~----Grr~~l-~~~~~~~~~~-~-~~~--   97 (440)
                      .....+..++++..+ +.+|+++.++|.+..+..+...+..|+.|+++||.    ||||.. ..+.+...+. . +..  
T Consensus        21 ~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~  100 (448)
T PRK09848         21 NFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVP  100 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCc
Confidence            333444556664444 56799999999999999999999999999999986    777765 4455544433 2 221  


Q ss_pred             --ccc--hhHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHH-----HHHHHHHHHHHHH
Q psy10432         98 --FSS--DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSG-----LFAIVSGFTAHFF  167 (440)
Q Consensus        98 --~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~-----~g~~~g~~~~~~l  167 (440)
                        ..+  .....+....+.+++.+...+...++..      +.. ++++|.+..+....+.+     ++..++|.+++..
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~  174 (448)
T PRK09848        101 TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLAT------AMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS  174 (448)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhh------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence              111  2233455566778888888765555544      444 44678887776655433     4455556555432


Q ss_pred             HhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432        168 ADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF  247 (440)
Q Consensus       168 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (440)
                      .+....++.....+..++..+..+......||++++++     ++.+..+.++.++|||.++...+..++..........
T Consensus       175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~-----~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~  249 (448)
T PRK09848        175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIV-----AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSA  249 (448)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCc-----cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh
Confidence            11101000111122222222222333334566543221     1124556788899999998887777777666655543


Q ss_pred             hhhhhh-h-ccC--Cchh-hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcch
Q psy10432        248 VWTPVL-E-VLS--PPLG-LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLST  322 (440)
Q Consensus       248 ~~~~~~-~-~~~--~~~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (440)
                       ..|++ + ..+  ...+ +......++.+++.++.+++.|| +++++.+..+..+..++.+.+ .+.  +.... +   
T Consensus       250 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~-~~~--~~~~~-~---  320 (448)
T PRK09848        250 -SSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLF-FWV--SVWSL-P---  320 (448)
T ss_pred             -hheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHc--CchhH-H---
Confidence             44544 2 222  2223 33333456678889999999997 999999988887777766544 221  11111 1   


Q ss_pred             hHHHHHHHHHHHhhhchhhhHHhHhccCCcch-------hhHHHHHHhhhhhhhHHHHHHHH
Q psy10432        323 NLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK-------ARATITNWLRVPTNFITCFTLIF  377 (440)
Q Consensus       323 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~~~~  377 (440)
                       .......+.+++.+...+...++..+..|.+       .+|..+|+.+....+|..+++.+
T Consensus       321 -~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i  381 (448)
T PRK09848        321 -VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI  381 (448)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence             2333444566677777888888888877644       45899999999999999888764

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.89  E-value=6.6e-21  Score=172.97  Aligned_cols=370  Identities=13%  Similarity=0.072  Sum_probs=230.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHH--HHh-h
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVY--TLC-C   94 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~--~~~-~   94 (440)
                      +.-..++..++..+...|+.+.-.++ .|+|.+++|.+++++.+...+.+|+.|.++||+|.||-++......  ..+ .
T Consensus        11 ~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pf   90 (412)
T PF01306_consen   11 WLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPF   90 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence            34445555566666788888555554 8999999999999999999999999999999999766654433222  223 2


Q ss_pred             -hhccc----chhH-HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         95 -LTKFS----SDFY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus        95 -~~~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                       ...+.    .|++ ..+++-+..|+......|..+++.-      +..  ++.+.-.|-..+.+++|.+++..++|.+.
T Consensus        91 f~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~e------r~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~  162 (412)
T PF01306_consen   91 FIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAE------RVS--RRNGFEYGRARMWGSIGFAIASLLAGILF  162 (412)
T ss_dssp             HHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHH------HHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHH------HHH--HHhcCCcchHHHHhhHHHHHHHHHhheee
Confidence             22222    2222 2222223333333333344333332      221  34455678889999999999999999998


Q ss_pred             hhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC---CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHH
Q psy10432        169 DILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS---SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTF  245 (440)
Q Consensus       169 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (440)
                      +..+   ...|++.....++..++..+..|+.+++.+..+   +++.+...++..+++|+|++|.+.+........+..+
T Consensus       163 ~i~p---~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vf  239 (412)
T PF01306_consen  163 NINP---NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVF  239 (412)
T ss_dssp             HHHH---HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeCc---cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence            7622   466666554444444443333334332211111   1111112345668899999999777666555555554


Q ss_pred             HHhhhhhh----hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchh
Q psy10432        246 IFVWTPVL----EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRR  318 (440)
Q Consensus       246 ~~~~~~~~----~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (440)
                      -..++.++    +.   .....|.+.+...+..++.-.+.+++.+| +|.|+.+.++..++.+=..+. .+.   +..+ 
T Consensus       240 dqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~-~~~---~~~~-  313 (412)
T PF01306_consen  240 DQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGS-GFA---TNPW-  313 (412)
T ss_dssp             HHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHH-HT-----SHH-
T ss_pred             HHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHH-hhh---cchH-
Confidence            33333333    11   12568899999999999999999999998 999999999888877766554 211   1111 


Q ss_pred             hcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHh-hhhhhhHHHHHHHHhhccccccCccchhhHHHHH
Q psy10432        319 VLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWL-RVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVV  397 (440)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (440)
                           .....-.+.+.-.++......-++++.+|++..++...+. +...+++..+.+...   |...| ..|++.+|.+
T Consensus       314 -----~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~---G~lyd-~~G~~~tyli  384 (412)
T PF01306_consen  314 -----VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLA---GYLYD-RIGFQHTYLI  384 (412)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHH---HHHHH-HHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhH---HhhHh-hcCcHHHHHH
Confidence                 2233333444445555556777888889999999998884 688888888888844   88889 8999999988


Q ss_pred             HHHHHHHHHHHHHHhhh
Q psy10432        398 CTACLLVALLASCVFKR  414 (440)
Q Consensus       398 ~~~~~~~~~~~~~~~~~  414 (440)
                      .+.+.+...++.....+
T Consensus       385 mg~iv~~~~li~~f~l~  401 (412)
T PF01306_consen  385 MGLIVLPFTLISAFTLK  401 (412)
T ss_dssp             HHHHHHHHHHHHHHHS-
T ss_pred             HHHHHHHHHHHheeeec
Confidence            88877776666655544

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.89  E-value=1.4e-20  Score=178.62  Aligned_cols=327  Identities=15%  Similarity=0.132  Sum_probs=234.6

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHHH-HHHhHHHHHh-hhhccc-c-----
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLIC-ISYGIVYTLC-CLTKFS-S-----  100 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l-~~~~~~~~~~-~~~~~~-~-----  100 (440)
                      ...++...+ +.+|+++..+|.+..++.+...+..|+.|.++|    |+||||.. +.+....+++ .++... +     
T Consensus        20 ~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~   99 (428)
T PF13347_consen   20 LSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSF   99 (428)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhh
Confidence            334444555 567999999999999999999999999999999    89988775 4577888887 444434 3     


Q ss_pred             --hhHHHHHHHHHHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----
Q psy10432        101 --DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL----  173 (440)
Q Consensus       101 --~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw----  173 (440)
                        ....+.+..++..++.........++..      |..+ ++||.+..+..+.+..+|.++...+.+.+.+.++-    
T Consensus       100 ~~~~~~~~~~~~l~~~~~t~~~i~~~al~~------~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~  173 (428)
T PF13347_consen  100 TAKLVWLFVFYILFDIAYTFVQIPYNALIP------ELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTS  173 (428)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccCchhhcCc------cccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccc
Confidence              2234566677778888887554444444      9987 56899999999999999988777777776655442    


Q ss_pred             -CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432        174 -GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV  252 (440)
Q Consensus       174 -~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (440)
                       +++....+.+++..+..+...+..||++++.+++  +++.+.++.++.+++||.++.......+.......... ..++
T Consensus       174 ~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~--~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~-~~~y  250 (428)
T PF13347_consen  174 NGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ--EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNT-FLPY  250 (428)
T ss_pred             hHHHHHHHHHHHHHHHHhhhhhheeeecccccccc--ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhh-HHHH
Confidence             2366667777776666666677778832222221  24445677889999999999888777776666554433 2333


Q ss_pred             h-hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432        253 L-EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       253 ~-~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                      + +.   .+...+.......++.+++.++.+++.|| +|+|+....+..+.+++.+.+... .. ...+      ..++.
T Consensus       251 ~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~-~~-~~~~------~~~i~  321 (428)
T PF13347_consen  251 YFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAALGFLLLFFL-GP-GSPW------LVLIL  321 (428)
T ss_pred             HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHHHHHHHHHH-Hh-hhHH------HHHHH
Confidence            3 11   12456677778888999999999999998 999999999988888877665222 11 1112      35556


Q ss_pred             HHHHHHhhhchhhhHHhHhccCCcc-------hhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        329 FLIYEISVGMYCPVTGYLRGRIIPE-------KARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ..+.+++.+..+....++..|..+.       +..|..+|+.+....++..+++.+.
T Consensus       322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~  378 (428)
T PF13347_consen  322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV  378 (428)
T ss_pred             HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence            6677777888888888888888763       3468889999999999888887643

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.88  E-value=1.1e-19  Score=171.58  Aligned_cols=348  Identities=13%  Similarity=0.072  Sum_probs=239.5

Q ss_pred             HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHH-Hh-hhhcc-cc-hhHHHHHHHHHHHHHHhhhccccchhh
Q psy10432         52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYT-LC-CLTKF-SS-DFYILLYGRLFGGIATSILFSGFESWY  127 (440)
Q Consensus        52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~-~~-~~~~~-~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~  127 (440)
                      .+...+++.++..+..|+.|.++|+-|+||.++....+.+ ++ .+..+ .+ +++...+.-++.-++.+......++++
T Consensus        72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L  151 (477)
T PF11700_consen   72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL  151 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3457889999999999999999999998777665444444 34 33333 33 344444555555555555544444455


Q ss_pred             hccccccccccchhh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHhhc------ccCc
Q psy10432        128 VNEHLNYYLFPVEWL--------------------------NLTFARATFGSGLFAIVSGFTAHFFADIL------NLGP  175 (440)
Q Consensus       128 ~~~~~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~  175 (440)
                      .      |..+++++                          ++..+.-.....+|.++.-.+.-.+....      .+..
T Consensus       152 P------~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~  225 (477)
T PF11700_consen  152 P------DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAI  225 (477)
T ss_pred             H------hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhh
Confidence            5      99888888                          89999988888898888777665554332      2334


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCC-----CccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhh
Q psy10432        176 IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSL-----LPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWT  250 (440)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (440)
                      |..+.+.+...++..+..++.+||++++++.+...     ..++..+.+|++.|+|....+.+..++...+..+... ..
T Consensus       226 r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~-~~  304 (477)
T PF11700_consen  226 RVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS-FA  304 (477)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HH
Confidence            77777777777777777778888887632222111     1234556677788889999988888888888777655 33


Q ss_pred             hhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCc--hhHHHHHHHHHHHH-HHHHHhhh-ccccchhhcc
Q psy10432        251 PVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPE--TMLTLTVYLATFSI-TVSTVLTS-SLFDSRRVLS  321 (440)
Q Consensus       251 ~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~  321 (440)
                      .+|  +..+   .+.........+..++|+++.+++.|| +|.|  +.+..+.....+.. ..++.+.. .......+  
T Consensus       305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~--  381 (477)
T PF11700_consen  305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPW--  381 (477)
T ss_pred             HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHH--
Confidence            444  2333   556667777888999999999999997 9998  67666665553322 22211111 10011111  


Q ss_pred             hhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432        322 TNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC  401 (440)
Q Consensus       322 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (440)
                        ...+...+.+...|..++...++..+..|+++.+..+|++.......+.+||.++   +.+.+...+.+..+....++
T Consensus       382 --~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~---g~i~~~tg~~r~g~~~l~~l  456 (477)
T PF11700_consen  382 --EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF---GLITDATGSQRYGFLFLLVL  456 (477)
T ss_pred             --HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCchhHHHHHHHH
Confidence              2333334566778999999999999999999999999999999999999999977   66666344578888888888


Q ss_pred             HHHHHHHHHHhhh
Q psy10432        402 LLVALLASCVFKR  414 (440)
Q Consensus       402 ~~~~~~~~~~~~~  414 (440)
                      .+++.++....+.
T Consensus       457 f~~gl~ll~~v~~  469 (477)
T PF11700_consen  457 FLIGLILLFFVDV  469 (477)
T ss_pred             HHHHHHHHhhccc
Confidence            8888777765554

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR00788 fbt folate/biopterin transporter

Probab=99.88  E-value=7e-21  Score=181.52  Aligned_cols=324  Identities=13%  Similarity=0.024  Sum_probs=209.4

Q ss_pred             hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-----hhHHHHHHhHHHH-Hh-hhhcccchhHHH-HHHHHHH
Q psy10432         41 VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-----RKLICISYGIVYT-LC-CLTKFSSDFYIL-LYGRLFG  112 (440)
Q Consensus        41 ~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-~~-~~~~~~~~~~~l-~~~r~l~  112 (440)
                      +.+++|+|+++++...++..+...+ .|++|+++||++     ||+.++++.++.. +. ...+..++.... .+..++.
T Consensus        52 l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~  130 (468)
T TIGR00788        52 LTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLA  130 (468)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence            3367999999998876666666554 457999999997     7777777776663 44 334444554444 4488999


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHH---HHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTF---ARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      +++.+....+.++++.      |..+ |+++...   +......++|.++|+.++|.+.+.++|  +..|++.+.+.++.
T Consensus       131 ~~~~a~~dv~~da~~~------e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~--~~~f~~~a~l~ll~  201 (468)
T TIGR00788       131 ALAKALYDVLVDSLYS------ERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLT--RILFLITAALLLLQ  201 (468)
T ss_pred             HHHHHHHHHhHHHHHh------hhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCc--chHHHHHHHHHHHH
Confidence            9999999887777777      8887 5444433   333344558999999999999999999  87887777666655


Q ss_pred             HHHHHHhccccCC-CCCccCCC--------------CccchhhhhhhhccCcchHHHHHHHHH-HHhHHHHHHHh--hhh
Q psy10432        190 TLFIYFCWEEHYD-PKTAKSSL--------------LPNSMFSSLKFLFTNPCLLTLGIVQSI-YEGIMYTFIFV--WTP  251 (440)
Q Consensus       190 ~~~~~~~~~e~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~  251 (440)
                       .+...++||++. ..++.++.              ..++.....+..+++|.++...+..++ ...........  +.+
T Consensus       202 -~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~  280 (468)
T TIGR00788       202 -LFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATT  280 (468)
T ss_pred             -HHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEc
Confidence             334556687641 11110000              001112234455777887775554444 11111000000  001


Q ss_pred             -hhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHH
Q psy10432        252 -VLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFL  330 (440)
Q Consensus       252 -~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (440)
                       .++......|......+++.+++..+.+++.+| ++.|+.+.++.++..++.+.........+.....+..........
T Consensus       281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~  359 (468)
T TIGR00788       281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI  359 (468)
T ss_pred             ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence             113334888999999999999999999999997 999998888887777765443111101000000000001222333


Q ss_pred             HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        331 IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       331 ~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      +.+++.++.......++++..|++.+|+.+++.+...++|..+++.
T Consensus       360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~  405 (468)
T TIGR00788       360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF  405 (468)
T ss_pred             HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence            4555677777777899999999999999999999999999999996

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.88  E-value=1.5e-19  Score=171.77  Aligned_cols=325  Identities=15%  Similarity=0.126  Sum_probs=208.2

Q ss_pred             hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHH
Q psy10432         35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGG  113 (440)
Q Consensus        35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G  113 (440)
                      ...++.++.|+|-++ ...|+...-.+......|+.|+++|.+|||..++.+.++..++ ++++.++|...++++..+.|
T Consensus        64 a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G  142 (599)
T PF06609_consen   64 ASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG  142 (599)
T ss_pred             HHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence            445667889999654 4446544444555555589999999999999999999999999 79999999999999999999


Q ss_pred             HHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHH
Q psy10432        114 IATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFI  193 (440)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~  193 (440)
                      +|.|.... ...      .++|..|.+.|....++...........+|.++..+..+-+|  ||.|++..+...+..++.
T Consensus       143 vgaG~~~~-~~~------~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~W--Rw~~~~~~i~~~i~~vl~  213 (599)
T PF06609_consen  143 VGAGVQEL-AAL------AISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGW--RWIFYIFIIWSGIALVLI  213 (599)
T ss_pred             HhhHHHHH-HHH------HHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCc--chHHHHHHHHHHHHHHHH
Confidence            99877632 222      244999999998888777766666666788888777766788  666666665544444433


Q ss_pred             H-HhccccCCCC--Cc---c-----------------------------C-CCCccc-----------------------
Q psy10432        194 Y-FCWEEHYDPK--TA---K-----------------------------S-SLLPNS-----------------------  214 (440)
Q Consensus       194 ~-~~~~e~~~~~--~~---~-----------------------------~-~~~~~~-----------------------  214 (440)
                      . +..|+++++.  ++   +                             . ..+.++                       
T Consensus       214 ~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~  293 (599)
T PF06609_consen  214 FFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF  293 (599)
T ss_pred             HHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh
Confidence            2 3333332110  00   0                             0 000000                       


Q ss_pred             --hhhh--hhhhccCcchHH-HHHHHHHHHhHHHHHHHhhhhhh-hccC------CchhhHHHHHHHHHHHHHHHHHHHH
Q psy10432        215 --MFSS--LKFLFTNPCLLT-LGIVQSIYEGIMYTFIFVWTPVL-EVLS------PPLGLVFSCFMISIMIGSKIYSILI  282 (440)
Q Consensus       215 --~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~g~~~~~~~~~~~~~~~~~g~l~  282 (440)
                        .+++  ..+++|+++.+. ..+..++....++.....|+... ..++      ...++.....+++..++..+.+.+.
T Consensus       294 ~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~  373 (599)
T PF06609_consen  294 GAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLF  373 (599)
T ss_pred             ccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHH
Confidence              0011  124666644333 44444444444555545566543 2222      2467777888899999999999999


Q ss_pred             hhccCCchhH-HHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHH
Q psy10432        283 LKYFKPETML-TLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITN  361 (440)
Q Consensus       283 ~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g  361 (440)
                      .+ .++.|.. ..+...+..++..+ ... .++...      .......+.+++.|..........+-..|++..|++.|
T Consensus       374 ~~-ir~~Kw~li~~~~~~ta~~Gam-a~~-~~~n~~------~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~g  444 (599)
T PF06609_consen  374 SK-IRHIKWQLIFGSVLMTAFCGAM-AAV-RPDNKN------AAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATG  444 (599)
T ss_pred             HH-ccchhHHHHHHHHHHHHHHHHH-HHc-cCCCcc------hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHH
Confidence            86 7665544 44444444333222 222 222222      12222334455666666666777777889999999999


Q ss_pred             HhhhhhhhHHHHHHHHh
Q psy10432        362 WLRVPTNFITCFTLIFI  378 (440)
Q Consensus       362 ~~~~~~~~g~~~~~~~~  378 (440)
                      +..+...+|+.++..++
T Consensus       445 L~~s~R~~GGsIg~aIy  461 (599)
T PF06609_consen  445 LTGSIRSIGGSIGYAIY  461 (599)
T ss_pred             HHHHHHHHhhHHHHHHH
Confidence            99999999999888543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.88  E-value=5.6e-19  Score=162.00  Aligned_cols=327  Identities=13%  Similarity=0.089  Sum_probs=229.2

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHH-HHHHhHHHHHh-hhhcccc------
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLI-CISYGIVYTLC-CLTKFSS------  100 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~-l~~~~~~~~~~-~~~~~~~------  100 (440)
                      ...++...| +..|+++..+|.++.+.-+...+..|+.|.++|    |+||+|. ++.+.+-.++. .++..++      
T Consensus        31 ~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~  110 (467)
T COG2211          31 VVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTG  110 (467)
T ss_pred             HHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCc
Confidence            444554555 678999999999999999999999999999999    5888776 45576777776 5555555      


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cC
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-----LG  174 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----w~  174 (440)
                      +....++...+.+++.....-...++..      +.. +++||.+..++.+.+.++|..+...+...+.+.++     +.
T Consensus       111 k~~ya~vtY~l~~l~YT~vniPy~al~~------~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g  184 (467)
T COG2211         111 KLIYALVTYMLLGLGYTLVNIPYGALGP------EITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALG  184 (467)
T ss_pred             chHHHHHHHHHHHHHHHheeCchhhcch------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhh
Confidence            3445567778888888887554444444      654 46789999999999999997777766666655432     11


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432        175 PIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-  253 (440)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (440)
                      ++....+.+++..+..+.+++..+|+..+.++.++..+.+.++.+..+++||.++...+...+...+.... .....+| 
T Consensus       185 ~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~-~s~~~yy~  263 (467)
T COG2211         185 YQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIR-GSIMVYYV  263 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHH-hhhhheeE
Confidence            25555555555555666667777887754443322234555667778899999988877665555554433 2233344 


Q ss_pred             ----hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHH
Q psy10432        254 ----EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAF  329 (440)
Q Consensus       254 ----~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (440)
                          +..+......+.....+.+++.++..++.+| +|+|+...++.++.+++.+++ .+.. .+  ...    ..++..
T Consensus       264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~-~f~~-~~--~~~----l~~~~~  334 (467)
T COG2211         264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLL-YFTP-AG--SVV----LIVVAL  334 (467)
T ss_pred             EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHH-Hhhc-Cc--chH----HHHHHH
Confidence                2223555566677777788889999999997 999999999999988888777 3322 11  111    345555


Q ss_pred             HHHHHhhhchhhhHHhHhccCCcch-------hhHHHHHHhhhhhhhHHHHHHH
Q psy10432        330 LIYEISVGMYCPVTGYLRGRIIPEK-------ARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       330 ~~~~~~~g~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ++..++.+...+..++++.|..+.+       ..|..+|...++..+|.+++..
T Consensus       335 ~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~  388 (467)
T COG2211         335 IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF  388 (467)
T ss_pred             HHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            6677788889999999999886533       4577788888888888777764

>KOG0255|consensus

Probab=99.88  E-value=5.4e-20  Score=179.27  Aligned_cols=313  Identities=15%  Similarity=0.116  Sum_probs=213.4

Q ss_pred             hhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhh
Q psy10432         43 KDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSI  118 (440)
Q Consensus        43 ~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~  118 (440)
                      +.+..+......   ++.+|.+++.+   ++|.++||+|||++++.+.++..++ ++.++++|++.+++.|++.|++.+.
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~---i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~  187 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSL---IFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSG  187 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHh---hheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccc
Confidence            344444444433   67777777776   9999999999999999999999998 8999999999999999999999999


Q ss_pred             hccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcc
Q psy10432        119 LFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWE  198 (440)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~  198 (440)
                      .......++.      |++++++|+.+..+ ......+..+++..++++..  +|  |+.+++......+..++ ++..|
T Consensus       188 ~~~~~~~~~~------E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~W--r~~~~~~~~~~~~~~~~-~~l~~  255 (521)
T KOG0255|consen  188 PLTVGFGLVA------EIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DW--RWLFWIISIPSGLFLLL-WFLPP  255 (521)
T ss_pred             hhHHhHhhhe------eecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hH--HHHHHHHHHHHHHHHHH-HHccC
Confidence            9776666666      99999999999999 77788888888888888877  67  88888877777655444 55556


Q ss_pred             ccCCCC----Cc--------c------CCCCccc-hh----------------hhhhhhccCcchHHHHHHHHHHHhHHH
Q psy10432        199 EHYDPK----TA--------K------SSLLPNS-MF----------------SSLKFLFTNPCLLTLGIVQSIYEGIMY  243 (440)
Q Consensus       199 e~~~~~----~~--------~------~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (440)
                      |+++-.    +.        +      .....++ ..                ..+..+++.|++....+...+......
T Consensus       256 Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~  335 (521)
T KOG0255|consen  256 ESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFS  335 (521)
T ss_pred             cChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHh
Confidence            876510    00        0      0000000 00                112334444443333332222221111


Q ss_pred             HHHHhhhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchh
Q psy10432        244 TFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTN  323 (440)
Q Consensus       244 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (440)
                      .............+..........+.....+....+...|+ .||+.....+.....++.+...+. ......+      
T Consensus       336 ~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~-~gR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------  407 (521)
T KOG0255|consen  336 LVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPE-FGRRPPLFLSLFLAGIGLLLFGWL-PDDLGGW------  407 (521)
T ss_pred             HHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHh-hccchhH------
Confidence            11111111114445666677777777777888888899997 999999888888888877666332 2222111      


Q ss_pred             HHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        324 LCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       324 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      .......+..++.+..+........|..|+..|..+.+..+....+++.++|.+.
T Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~  462 (521)
T KOG0255|consen  408 LHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP  462 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1122222333345555556688889999999999999999999999999999855

>PRK11462 putative transporter; Provisional

Probab=99.88  E-value=3.8e-19  Score=169.54  Aligned_cols=325  Identities=10%  Similarity=0.016  Sum_probs=198.2

Q ss_pred             HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccc----cchhHHHH-HHhHHHHHh-hhhcccch--
Q psy10432         31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK----FGRKLICI-SYGIVYTLC-CLTKFSSD--  101 (440)
Q Consensus        31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~l~-~~~~~~~~~-~~~~~~~~--  101 (440)
                      ..+...++...+ +..|+++..+|.++.++-+...+..|+.|.++||    +||||..+ ++.+..+++ .++...++  
T Consensus        25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s  104 (460)
T PRK11462         25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLS  104 (460)
T ss_pred             HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCC
Confidence            334444554444 6789999999999999999999999999999995    79877754 566777776 44333332  


Q ss_pred             ----hHHHHHHHHHHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Q psy10432        102 ----FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL---  173 (440)
Q Consensus       102 ----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw---  173 (440)
                          ...+.+..++..++.........++..      |..+ ++||.+..++...+..+|..+++.+...+.+..|-   
T Consensus       105 ~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~------~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~  178 (460)
T PRK11462        105 MNGKMIYAAITYTLLTLLYTVVNIPYCALGG------VITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNK  178 (460)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhccHHHHHH------HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence                344566667778888777655555555      7665 77999999999999999988888877666555431   


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432        174 --GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP  251 (440)
Q Consensus       174 --~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (440)
                        .|+....+.+++.++.....+...+|++++++     ++.+.++.++..++||.++.+.....+.......... ...
T Consensus       179 ~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-----~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~-~~~  252 (460)
T PRK11462        179 PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-----TTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGG-AMM  252 (460)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-----cCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh-Hhh
Confidence              11443344444433333333444466533221     1223566788889999887765554444333322212 112


Q ss_pred             hh-hc---cCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        252 VL-EV---LSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       252 ~~-~~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      ++ +.   .+...+.......++.+++.++.+++.|| +++|+....+.....+....+ .+.. ..  ...    ....
T Consensus       253 y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~-~~~~-~~--~~~----~~~~  323 (460)
T PRK11462        253 YYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAM-FFVP-MQ--ASI----TMFV  323 (460)
T ss_pred             hhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHH-HHhc-hh--HHH----HHHH
Confidence            22 11   12334456667778889999999999997 988877654444333322222 1111 11  111    1122


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCc-------chhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIP-------EKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ...+.+++.+...+..+++..|..+       .+..|..++.......+|..+++.
T Consensus       324 ~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~  379 (460)
T PRK11462        324 FIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGA  379 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            2233344455556666667776654       223455567766777777777764

>PTZ00207 hypothetical protein; Provisional

Probab=99.87  E-value=1.6e-19  Score=172.68  Aligned_cols=353  Identities=14%  Similarity=0.084  Sum_probs=229.6

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc------chhHHH
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS------SDFYIL  105 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~------~~~~~l  105 (440)
                      .++.+.+++.+++|+|.++++++..++...+ ...++.|+++||+|||+++.++.+++.++ .+++++      ++++.+
T Consensus        45 ~fsv~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l  123 (591)
T PTZ00207         45 AFNLISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL  123 (591)
T ss_pred             HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence            3455667778999999999999887766554 45667899999999999999999999998 666665      689999


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhhcccCchhhHHHHHH
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIV-SGFTAHFFADILNLGPIAPFAVAIP  184 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~gw~~~~~~~~~~~  184 (440)
                      ++.|++.|+|.+...+.....+.      +++| ++||++.|+...+.++|..+ +++..+++.+  +|  +..|+..+.
T Consensus       124 ~l~r~l~G~G~~~~~~~~~~~i~------~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~--~~~fl~l~v  192 (591)
T PTZ00207        124 SVYNGLMTLGCMLFDLGAVVTVL------SVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NT--SAYFFFLMS  192 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH------HhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hH--HHHHHHHHH
Confidence            99999999999988776665665      8886 78999999999999999865 5555555432  34  444444444


Q ss_pred             HHHHHHHHHHHhccccCCCC----C----c-c------------------------------------------------
Q psy10432        185 FLLGSTLFIYFCWEEHYDPK----T----A-K------------------------------------------------  207 (440)
Q Consensus       185 ~~~~~~~~~~~~~~e~~~~~----~----~-~------------------------------------------------  207 (440)
                      +.++..++...++++++.+.    +    + +                                                
T Consensus       193 l~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~  272 (591)
T PTZ00207        193 FALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLG  272 (591)
T ss_pred             HHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            44433333333333222100    0    0 0                                                


Q ss_pred             ---------------------------------C-C------------------C--------C-c-cchhhhhhhhccC
Q psy10432        208 ---------------------------------S-S------------------L--------L-P-NSMFSSLKFLFTN  225 (440)
Q Consensus       208 ---------------------------------~-~------------------~--------~-~-~~~~~~~~~~~~~  225 (440)
                                                       + +                  +        + . .+..+++++.+++
T Consensus       273 ~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~  352 (591)
T PTZ00207        273 SNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKT  352 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhc
Confidence                                             0 0                  0        0 0 0001134455556


Q ss_pred             cchHHHHHHHHHHHhHHHHHHHhhhhhhhcc-C----Cchhh-HHHHHHHHHHHHHHHHHHHH---hhccC----Cchh-
Q psy10432        226 PCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL-S----PPLGL-VFSCFMISIMIGSKIYSILI---LKYFK----PETM-  291 (440)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~g~-~~~~~~~~~~~~~~~~g~l~---~r~~~----~~~~-  291 (440)
                      .++|.+.+..++..+.....++....+.+.. +    .+... +.+..++++.+|++..|.+.   +|+..    ++.. 
T Consensus       353 ~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~  432 (591)
T PTZ00207        353 ARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIA  432 (591)
T ss_pred             hhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHH
Confidence            7888888888888777776666666666322 2    21122 67888999999999888876   22121    1111 


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH
Q psy10432        292 LTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT  371 (440)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~  371 (440)
                      +.+..+ +.++.+.+ .+ ..+   . .    .+.++..+.+++.|..++.....+.|.+. ++-|+.+.+.....-+|+
T Consensus       433 l~~~~~-~~~~~lll-~~-~~p---~-~----~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs  500 (591)
T PTZ00207        433 LFIPSV-CIITMLTL-FL-TLP---K-A----ALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSA  500 (591)
T ss_pred             HHHHHH-HHHHHHHH-HH-HCC---c-c----HhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHH
Confidence            222222 33333222 21 111   0 1    46677777888899999999999999999 999998888877777777


Q ss_pred             HHHHHHhhccccccCc------------cchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        372 CFTLIFIKNEDAEGGK------------LIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       372 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      .+-.-.+.  |...|.            ..=++..|++.+++++.+.+....
T Consensus       501 ~~~n~~l~--G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~  550 (591)
T PTZ00207        501 IFLNRLLY--GEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY  550 (591)
T ss_pred             HHHHHHHH--HHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence            76644332  222221            111577888888888777766544

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.87  E-value=2.5e-21  Score=190.16  Aligned_cols=264  Identities=14%  Similarity=0.133  Sum_probs=190.0

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc------
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS------  100 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~------  100 (440)
                      .+.....++.+.++++++.++.|+   .+.+++++..   ++.|+++||+||||.+.++.++++++ +++++.+      
T Consensus        49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~---i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y  125 (633)
T TIGR00805        49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI---IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRY  125 (633)
T ss_pred             HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH---HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCc
Confidence            455667777888999999999988   4555555555   49999999999999999999999998 5555432      


Q ss_pred             ---------------------------------------------hhHHHHHHHHHHHHHHhhhccccchhhhccccccc
Q psy10432        101 ---------------------------------------------DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYY  135 (440)
Q Consensus       101 ---------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~  135 (440)
                                                                   .+..++++|+++|+|.+...+...+++.      |
T Consensus       126 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~------d  199 (633)
T TIGR00805       126 SYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYID------D  199 (633)
T ss_pred             cccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhh------c
Confidence                                                         2456789999999999999777666666      9


Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cc---------------C----chhhHHHHHHHHHHHHHHHHH
Q psy10432        136 LFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NL---------------G----PIAPFAVAIPFLLGSTLFIYF  195 (440)
Q Consensus       136 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw---------------~----~~~~~~~~~~~~~~~~~~~~~  195 (440)
                      ++|+++|++.+++......+|..+|+++++++.+.+ +|               |    |+..|++.+.+.++..+.. +
T Consensus       200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l-~  278 (633)
T TIGR00805       200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF-F  278 (633)
T ss_pred             cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence            999999999999999999999999999999998754 22               1    2566777666665554443 3


Q ss_pred             hccccCCCCCc--c-----CC------C--------CccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-
Q psy10432        196 CWEEHYDPKTA--K-----SS------L--------LPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-  253 (440)
Q Consensus       196 ~~~e~~~~~~~--~-----~~------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (440)
                      .+|++.+++++  +     ++      .        ..++..+..+.+++||.++...+...+.....+.+....+.++ 
T Consensus       279 ~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~  358 (633)
T TIGR00805       279 FFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLE  358 (633)
T ss_pred             hCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44543321100  0     00      0        0012234567889999999988888888888887766445454 


Q ss_pred             hccC---CchhhHHHHHHH-HHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHHH
Q psy10432        254 EVLS---PPLGLVFSCFMI-SIMIGSKIYSILILKYFK--PETMLTLTVYLATFSITV  305 (440)
Q Consensus       254 ~~~~---~~~g~~~~~~~~-~~~~~~~~~g~l~~r~~~--~~~~~~~~~~~~~~~~~~  305 (440)
                      +..+   .+++++.....+ +.+++.++.|++.|| ++  .++.+..+.....++.+.
T Consensus       359 ~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r-~~~~~~~~~~~~~~~~~~~~~~  415 (633)
T TIGR00805       359 NQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKK-FKLNVKKAAYFAICLSTLSYLL  415 (633)
T ss_pred             HHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeee-ecccHHHHHHHHHHHHHHHHHH
Confidence            3344   566777666665 567899999999997 76  445666666666665433

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.85  E-value=4.7e-25  Score=211.36  Aligned_cols=348  Identities=16%  Similarity=0.168  Sum_probs=217.6

Q ss_pred             hHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc---hhHHHHHHHHHHHHHHhhhccccchh
Q psy10432         51 NIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS---DFYILLYGRLFGGIATSILFSGFESW  126 (440)
Q Consensus        51 ~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~  126 (440)
                      +.++..+..++...+.+++.|.++||+|||+.++.+.++..++ ++.++++   |++.+.++|++.|++.|...+....+
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~  126 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIY  126 (451)
T ss_pred             HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4455555555555555679999999999999999999999999 7888998   99999999999999999997766666


Q ss_pred             hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHHHHHHHHHHhccccCCC--
Q psy10432        127 YVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDP--  203 (440)
Q Consensus       127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--  203 (440)
                      +.      |..|+++|++..++.+....+|.+++..++..+.+..+ |.||..+....+..++..+ ...++||+|+-  
T Consensus       127 ~~------E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~  199 (451)
T PF00083_consen  127 IS------EIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLL  199 (451)
T ss_pred             cc------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceec
Confidence            66      99999999999999999999999999888766644444 2338887777766654433 44678998750  


Q ss_pred             --C--Cc-c------------CC---CCccchh------hhhhhhccCcc----hHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432        204 --K--TA-K------------SS---LLPNSMF------SSLKFLFTNPC----LLTLGIVQSIYEGIMYTFIFVWTPVL  253 (440)
Q Consensus       204 --~--~~-~------------~~---~~~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (440)
                        .  ++ +            ++   +..++..      ..++++++++.    .........+.....+.....+.+.+
T Consensus       200 ~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i  279 (451)
T PF00083_consen  200 SKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSI  279 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence              0  00 0            00   0000000      12445555533    22222222222222211222333433


Q ss_pred             -hccCCchh-hHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH-Hhhhccccc--hhhcchhHHHHH
Q psy10432        254 -EVLSPPLG-LVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVST-VLTSSLFDS--RRVLSTNLCFVA  328 (440)
Q Consensus       254 -~~~~~~~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~  328 (440)
                       +..+.... .......+...++.++...+.|| +|||+.+..+...+.++.+.+. ......+..  +..    ..+..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~  354 (451)
T PF00083_consen  280 FENAGISNSFLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSI----LSIVF  354 (451)
T ss_pred             ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc----cccee
Confidence             33332222 23334445566777777899997 9999998888877777665552 011111110  011    11222


Q ss_pred             HHHHHHhhh-chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        329 FLIYEISVG-MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       329 ~~~~~~~~g-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ..+..+..+ ...+....+..|.+|++.|+++.|+......+++.+++.+.   ....+ ..+....+.+.++++++..+
T Consensus       355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~---~~~~~-~~~~~~~~~i~~~~~~i~~i  430 (451)
T PF00083_consen  355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF---PYLFN-NLGGWGVFLIFAGVCLIAII  430 (451)
T ss_pred             eeecccccccccccccccccccccccccccccccccccccccccccccccc---ccccc-cccccccchhhHHHHHHHHh
Confidence            222222233 24566778889999999999999999999999999988744   33444 34434445555555444444


Q ss_pred             HH-HHhhh
Q psy10432        408 AS-CVFKR  414 (440)
Q Consensus       408 ~~-~~~~~  414 (440)
                      +. ...++
T Consensus       431 ~~~~~lpE  438 (451)
T PF00083_consen  431 FVYFFLPE  438 (451)
T ss_pred             heeEEEee
Confidence            43 33444

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.85  E-value=1.2e-17  Score=157.46  Aligned_cols=361  Identities=11%  Similarity=0.054  Sum_probs=208.2

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhcccc-hhHHHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFSS-DFYILLYGR  109 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~~-~~~~l~~~r  109 (440)
                      ...+++... +++|.++.+.+.++........+..+++|+++||+ ||||+++.+.++..++ .+.+..+ +...+.++.
T Consensus        28 ~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l  107 (493)
T PRK15462         28 MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSL  107 (493)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Confidence            334443333 67899999998877777777677778999999999 9999999999999888 5544432 223344444


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVE--WLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      .+.++|.|...+...+++.      |.+|++  +|.+++++.....++|..++|.+.+++.+..||  +..|.+.++..+
T Consensus       108 ~li~iG~G~~~~~~~alv~------elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw--~~~F~iaaigm~  179 (493)
T PRK15462        108 AIIVCGYGLFKSNVSCLLG------ELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSW--AMGFGLAAVGMI  179 (493)
T ss_pred             HHHHHhcccccccHHHHHH------HHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhCh--HHHHHHHHHHHH
Confidence            5555666766666566666      999876  689999999999999999999999999998899  878777654443


Q ss_pred             HHHHHHHHhc---cccCCCCCccCCCCccc----------------h-----hhhh--------------------hhhc
Q psy10432        188 GSTLFIYFCW---EEHYDPKTAKSSLLPNS----------------M-----FSSL--------------------KFLF  223 (440)
Q Consensus       188 ~~~~~~~~~~---~e~~~~~~~~~~~~~~~----------------~-----~~~~--------------------~~~~  223 (440)
                      +..+......   ++....++++.++++..                .     .+.+                    +.-.
T Consensus       180 l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (493)
T PRK15462        180 AGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAE  259 (493)
T ss_pred             HHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3333222211   11111011110000000                0     0000                    0000


Q ss_pred             ---cCcchHHHHHHHHHHHhHHHHHHHhh---hhhh-hcc------C--CchhhHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy10432        224 ---TNPCLLTLGIVQSIYEGIMYTFIFVW---TPVL-EVL------S--PPLGLVFSCFMISIMIGSKIYSILILKYFKP  288 (440)
Q Consensus       224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~------~--~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~  288 (440)
                         .+++++.+... ++....++..+...   ...+ +++      +  ...++..+.+.+..++.+++.+++-.| ..+
T Consensus       260 ~~~er~r~~~~~~l-~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~-l~~  337 (493)
T PRK15462        260 NQKQRKELGLIVTL-TFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE-SVA  337 (493)
T ss_pred             CHHHHhhHHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHH-Hhc
Confidence               01222221111 11111111111111   1122 111      1  446778889999888888888877554 311


Q ss_pred             --c-----hhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHH
Q psy10432        289 --E-----TMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITN  361 (440)
Q Consensus       289 --~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g  361 (440)
                        |     .-...++++.+++++.+............. .....+....+...+.-...|...+.+++..|++.+|+.+|
T Consensus       338 ~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~-s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg  416 (493)
T PRK15462        338 GNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHS-SLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTG  416 (493)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-CHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHH
Confidence              1     125667777777766552211111110000 01134555556666677789999999999999999999999


Q ss_pred             Hhhhhh-hhHHHHHHHHhhcccc-ccC-------ccchhhHHHHHHHHHHHHH
Q psy10432        362 WLRVPT-NFITCFTLIFIKNEDA-EGG-------KLIAIHSVFVVCTACLLVA  405 (440)
Q Consensus       362 ~~~~~~-~~g~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~  405 (440)
                      ...... .++..++..+..-... ..+       ....+...|...+...+++
T Consensus       417 ~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  469 (493)
T PRK15462        417 IYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC  469 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence            986633 4666655542211000 000       0124566777776655544

>KOG0253|consensus

Probab=99.84  E-value=7.1e-19  Score=152.18  Aligned_cols=341  Identities=13%  Similarity=0.048  Sum_probs=219.6

Q ss_pred             HhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhc
Q psy10432         42 YKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILF  120 (440)
Q Consensus        42 ~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~  120 (440)
                      .+..|.+..+..++......-..+.+..+|.++|++|||+...+..+...+. .+.+.++|+..+++.|.+.|+|.|. .
T Consensus       105 ~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~  183 (528)
T KOG0253|consen  105 DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-L  183 (528)
T ss_pred             HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-c
Confidence            3567777666665443333333333359999999999999999998888887 7999999999999999999999999 6


Q ss_pred             cccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432        121 SGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH  200 (440)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~  200 (440)
                      |...++..      |..|..+|....-.. ..+.+|.+....+.-.+..++||  |+..........+. ....+.+||+
T Consensus       184 pv~~~~yl------e~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gw--r~~l~~~~~pl~~~-a~f~~w~~ES  253 (528)
T KOG0253|consen  184 PVDSAIYL------EFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGW--RYLLFTSSTPLMFA-ARFLVWVYES  253 (528)
T ss_pred             cHhHHHHH------HhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHhHHHHH-HHHHhhcccC
Confidence            88778888      999999998887777 89999999999999999999999  44443333443333 3345678998


Q ss_pred             CCCC-----C----------------------------ccCCCC-----------ccchhhhhhhhccCcchHH------
Q psy10432        201 YDPK-----T----------------------------AKSSLL-----------PNSMFSSLKFLFTNPCLLT------  230 (440)
Q Consensus       201 ~~~~-----~----------------------------~~~~~~-----------~~~~~~~~~~~~~~~~~~~------  230 (440)
                      ++-.     +                            ++++++           .++.......++. |+++.      
T Consensus       254 pRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls-p~lrkttlllw  332 (528)
T KOG0253|consen  254 PRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS-PKLRKTTLLLW  332 (528)
T ss_pred             cchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC-hHHHHHHHHHH
Confidence            7600     0                            000000           0111112222222 33322      


Q ss_pred             -HHHHHHHHHhHHHHHHHhhhhhhhcc----------C------------Cchhh-HHHHHHHHHHHHHHHHHHHHhhcc
Q psy10432        231 -LGIVQSIYEGIMYTFIFVWTPVLEVL----------S------------PPLGL-VFSCFMISIMIGSKIYSILILKYF  286 (440)
Q Consensus       231 -~~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------~~~g~-~~~~~~~~~~~~~~~~g~l~~r~~  286 (440)
                       +...+.+.+.+...+   ....++..          +            ..-.+ -.....+....|.++.+++.|| +
T Consensus       333 ~iwfgnafsyyg~VLl---ttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver-l  408 (528)
T KOG0253|consen  333 RIWFGNAFSYYGSVLL---TTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER-L  408 (528)
T ss_pred             HHHHhhHHHHHHHHHH---HHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH-h
Confidence             222222222111111   11111100          0            11111 2344567788999999999998 9


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhh
Q psy10432        287 KPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVP  366 (440)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~  366 (440)
                      |||+.+...++..++..+.+ ......+  .       .....+...++....+...+.+..|..|+..|+++.|....+
T Consensus       409 GRKkTMal~l~~f~iflfll-~~c~~rn--~-------~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsm  478 (528)
T KOG0253|consen  409 GRKKTMALSLILFGIFLFLL-TTCKTRN--A-------YTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSM  478 (528)
T ss_pred             cchhHHHHHHHHHHHHHHHH-HHhcCcc--h-------hHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhH
Confidence            99999999998888876555 2222222  1       222223344456666778889999999999999999999999


Q ss_pred             hhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       367 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ..+|+++.|.+..    ..+  .+......+.+.+++++.+....++-
T Consensus       479 aRIggI~~p~iA~----~~e--~s~sl~i~vy~~~~ilagIavcffPi  520 (528)
T KOG0253|consen  479 ARIGGIFSPVIAM----RAE--LSTSLPIFVYGALFILAGIAVCFFPI  520 (528)
T ss_pred             HhhhhhhhhHHHH----Hhc--cceeehHHHHHHHHHHHHHHheeeee
Confidence            9999999998331    112  12234445555555666555555543

>KOG0252|consensus

Probab=99.84  E-value=1.5e-20  Score=167.35  Aligned_cols=339  Identities=15%  Similarity=0.120  Sum_probs=217.0

Q ss_pred             HHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc-------hhHHHHHHHHHHHHHHhhhccccc
Q psy10432         53 ALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS-------DFYILLYGRLFGGIATSILFSGFE  124 (440)
Q Consensus        53 ~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~  124 (440)
                      +.+..+|.+.+|+   +.|++.||+|||+++...+++..++ ++++++.       -..++...|++.|+|.|.-+|.+.
T Consensus        90 n~~A~vGti~GQl---~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSA  166 (538)
T KOG0252|consen   90 NAAALVGTIFGQL---FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSA  166 (538)
T ss_pred             HHHHHHHHHHHHH---HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchH
Confidence            3366667777776   9999999999999999998888887 5555542       246788999999999999999888


Q ss_pred             hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------ccCchhhHHHHHHHHHHH
Q psy10432        125 SWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL---------------NLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       125 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------gw~~~~~~~~~~~~~~~~  189 (440)
                      +.++      |...+++||...+..-+..+.|.+.|.+++-.+...+               =|  |..+.+.++..+. 
T Consensus       167 tI~S------E~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vW--Rl~~glg~vpa~~-  237 (538)
T KOG0252|consen  167 TIMS------ESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVW--RIIFGLGAVPALL-  237 (538)
T ss_pred             HHhh------hhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHH--HHHHHHHHHHHHH-
Confidence            8877      9999999999999988888888888877776654321               15  7777776666553 


Q ss_pred             HHHHHHhccccCCCC-----C-------ccCCCC------------ccchhhh---hhhhcc---CcchHHHHHHHHHHH
Q psy10432        190 TLFIYFCWEEHYDPK-----T-------AKSSLL------------PNSMFSS---LKFLFT---NPCLLTLGIVQSIYE  239 (440)
Q Consensus       190 ~~~~~~~~~e~~~~~-----~-------~~~~~~------------~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~  239 (440)
                      .+...+.+||+++-+     +       .++...            .+...+.   +...+.   -++++......++..
T Consensus       238 ~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllD  317 (538)
T KOG0252|consen  238 VLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLD  317 (538)
T ss_pred             HHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            333455678876421     1       000000            0000001   111111   123333455555555


Q ss_pred             hHHHHHHHhhhhhhhccC---Cc--------hhhHHHHHH-HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHH
Q psy10432        240 GIMYTFIFVWTPVLEVLS---PP--------LGLVFSCFM-ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVST  307 (440)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~---~~--------~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~  307 (440)
                      .+.|........+++..+   ..        ......+.. .+.+.|..+...+.|+ +||++....++.++.+..+.+ 
T Consensus       318 iafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~~-  395 (538)
T KOG0252|consen  318 IAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFVI-  395 (538)
T ss_pred             hhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHHH-
Confidence            555554333333443222   11        112222222 2233355666678897 999999999999888877655 


Q ss_pred             HhhhccccchhhcchhHHHHHHHHHHHhhhchhh--hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc
Q psy10432        308 VLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCP--VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG  385 (440)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~  385 (440)
                      ....+... ...    ..++...+.. .++-..|  ....+..|.+|.+.||+..|+....+..|+.++...+   ....
T Consensus       396 ~~~y~~~~-~~~----Gf~v~y~l~~-ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F---~~~t  466 (538)
T KOG0252|consen  396 AGPYNQLE-NTI----GFVVLYSLTF-FFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF---LYLT  466 (538)
T ss_pred             cCCccccc-ccC----ceeehHHHHH-HHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh---hHhh
Confidence            32211110 100    1222222222 2333444  4456678999999999999999999999999999865   3333


Q ss_pred             C----ccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        386 G----KLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       386 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +    ...+.+.++++.+++++++.+..+.+++
T Consensus       467 ~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pE  499 (538)
T KOG0252|consen  467 DHNYPPNIGVRNVFIILAGCMLLGILFTLLIPE  499 (538)
T ss_pred             hccCCccccchHHHHHHHHHHHHhHheeEEeec
Confidence            3    1457789999999999999988887776

>TIGR01272 gluP glucose/galactose transporter

Probab=99.83  E-value=2.1e-18  Score=155.52  Aligned_cols=274  Identities=13%  Similarity=0.059  Sum_probs=190.7

Q ss_pred             ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------
Q psy10432         98 FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI-------  170 (440)
Q Consensus        98 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------  170 (440)
                      ...+++.++++-++.|.|.+...++.++++.      +..++|++++.+++.+..+++|.++||.+++.+...       
T Consensus         6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~------~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~   79 (310)
T TIGR01272         6 SQRYYVLFLGALFVLASGLTILQVAANPYVS------ILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSM   79 (310)
T ss_pred             HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHH------HHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhh
Confidence            4578999999999999999999998888888      999999999999999999999999999999988732       


Q ss_pred             ---------cccCchhhHHHHHHHHHHHHHHH-HHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHh
Q psy10432        171 ---------LNLGPIAPFAVAIPFLLGSTLFI-YFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEG  240 (440)
Q Consensus       171 ---------~gw~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (440)
                               .+|  +.++++.+.+..+..+.. ....||.+++++++.+ +.++  ...+..+++|.++...+..++..+
T Consensus        80 ~~~~~~~~~~~~--~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~~~~f~yvg  154 (310)
T TIGR01272        80 QVATANAEAAKV--HTPYLLLAGALAVLAIIFAFLPLPELQEADVARVS-SGDT--TQKTSAFQFTHLVLGALGIFVYVG  154 (310)
T ss_pred             hhhhhhHHHHHH--HHHHHHHHHHHHHHHHHHHHccCCCCCcccccccc-cccc--cchhhHHhhHHHHHHHHHHHHHHH
Confidence                     245  888885555544333332 3344554332221111 1111  122346677888776666655554


Q ss_pred             HHHHHHHhhhhhh-h-c--cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432        241 IMYTFIFVWTPVL-E-V--LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL  313 (440)
Q Consensus       241 ~~~~~~~~~~~~~-~-~--~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (440)
                      ....... |.+.| . .  .+   .+.+...+....+.++|+++.+++.|| +++++.+..+..+.++..+.. ...  +
T Consensus       155 ~e~~~~~-w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~-~~~--~  229 (310)
T TIGR01272       155 AEVSAGS-FLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGA-ALT--H  229 (310)
T ss_pred             HHHHHHH-HHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHH-HHc--C
Confidence            5544433 55555 2 1  13   667888999999999999999999998 999998877776666655333 211  1


Q ss_pred             ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhH
Q psy10432        314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHS  393 (440)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  393 (440)
                      .  .      ...+.+.+.+++.+..+|...+...+..|+ +.+++.++. ....+|+.+.|.++   |.+.| ..+.+.
T Consensus       230 ~--~------~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~---G~lad-~~g~~~  295 (310)
T TIGR01272       230 G--Y------VAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQ---GSLAD-CLGIQL  295 (310)
T ss_pred             C--H------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHH---HHHHH-hccchH
Confidence            1  1      123444566778888999988888887664 355666665 56778999999866   77878 777788


Q ss_pred             HHHHHHHH
Q psy10432        394 VFVVCTAC  401 (440)
Q Consensus       394 ~~~~~~~~  401 (440)
                      .|.+...+
T Consensus       296 a~~v~~~~  303 (310)
T TIGR01272       296 AFALPVPC  303 (310)
T ss_pred             HHHHHHHH
Confidence            77754433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG2563|consensus

Probab=99.82  E-value=7.2e-18  Score=150.61  Aligned_cols=351  Identities=15%  Similarity=0.142  Sum_probs=229.7

Q ss_pred             HHHHHHHHHHHHHHHHH-----HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHh
Q psy10432         14 KRLQVRYFIPFFLATFS-----DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYG   87 (440)
Q Consensus        14 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~   87 (440)
                      +..++||+++...++..     +|+....+.+.. +-+| +.+..-|...+...+...++.++-|+.||+|-|...+++.
T Consensus        38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt  116 (480)
T KOG2563|consen   38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT  116 (480)
T ss_pred             ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence            45667787777666664     343333332333 4456 5444555555555555555569999999999999999999


Q ss_pred             HHHHHh-hh--hccc----chhH--HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHH
Q psy10432         88 IVYTLC-CL--TKFS----SDFY--ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAI  158 (440)
Q Consensus        88 ~~~~~~-~~--~~~~----~~~~--~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~  158 (440)
                      .+.+++ .+  .+..    +.++  ....+..+.+.+.-+...      .-..+..-|++++||..+..+-.++..+|..
T Consensus       117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~------lPskiA~~WF~~~qra~A~~~~v~~n~LGva  190 (480)
T KOG2563|consen  117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG------LPSKIAAVWFPPDQRAIATVLGVMGNPLGVA  190 (480)
T ss_pred             HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc------cccHHHHhhCCcchhhhhhhHHHhcchHHHH
Confidence            999998 33  2222    3444  566778888877777633      2334555899999999999999999999999


Q ss_pred             HHHHHHHHHHhhc------ccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCcc--CCCCccchhhhhhhhccCcchHH
Q psy10432        159 VSGFTAHFFADIL------NLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAK--SSLLPNSMFSSLKFLFTNPCLLT  230 (440)
Q Consensus       159 ~g~~~~~~l~~~~------gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  230 (440)
                      +|-++...+..+-      .|.-...|+....+..+...+..+..+|+|+.+...  ......+..++.++.++|+++..
T Consensus       191 vg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~i  270 (480)
T KOG2563|consen  191 VGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFII  270 (480)
T ss_pred             HHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHH
Confidence            9888887776542      341112344333333333333344444433322211  11122346788899999999999


Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhh--hcc-CCchhhHHHHHHHHHHHHHHHHHHHHhhccCC-chhHHHHHHHHHHHHHHH
Q psy10432        231 LGIVQSIYEGIMYTFIFVWTPVL--EVL-SPPLGLVFSCFMISIMIGSKIYSILILKYFKP-ETMLTLTVYLATFSITVS  306 (440)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-~~~~~~~~~~~~~~~~~~  306 (440)
                      ..+...+..+.++...+...+.+  ..| +...|.......+++++++.+.|.+.|| .+. |....+......++...+
T Consensus       271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk-tk~fk~~~~v~~~~~~v~~~~l  349 (480)
T KOG2563|consen  271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADK-TKKFKLTTLVLYLFALVGTLML  349 (480)
T ss_pred             HHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHH
Confidence            88888887777776655454344  222 3789999999999999999999999998 544 334444444444443333


Q ss_pred             HHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ..........+      ..+....+++++.....|....+..|..-+..-++..|+.+..+++-+.+-....
T Consensus       350 ~~~t~~~~~~v------iv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~  415 (480)
T KOG2563|consen  350 LTCTLFLGDSV------IVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIM  415 (480)
T ss_pred             HHhhccCCceE------ehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHH
Confidence            23333333333      2455555666667778888888888887777788889999999988888777744

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.82  E-value=9.2e-17  Score=143.38  Aligned_cols=351  Identities=13%  Similarity=0.066  Sum_probs=240.9

Q ss_pred             hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-----hhHHHHH-HhHHHHHh-hhhc-----ccc-------h
Q psy10432         41 VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-----RKLICIS-YGIVYTLC-CLTK-----FSS-------D  101 (440)
Q Consensus        41 ~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~-~~~~~~~~-~~~~-----~~~-------~  101 (440)
                      +..|++++...++.+..+.+.... ..+.+|+.+|+++     ||..++. |..+...+ .+..     ++.       +
T Consensus         6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~   84 (403)
T PF03209_consen    6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP   84 (403)
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence            347899999999888888888765 5789999999999     8877655 55555444 2211     222       2


Q ss_pred             h--H--HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCch-
Q psy10432        102 F--Y--ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPI-  176 (440)
Q Consensus       102 ~--~--~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~-  176 (440)
                      .  +  ...+.-.+.|+|.+...++..+++.      |..|+|+|+++.++...+.-+|.+++..+.+.+.+.++- .| 
T Consensus        85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~------D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-~rL  157 (403)
T PF03209_consen   85 FWLGLALAALAFLLYGLGVHASGTSFLALLA------DLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-ERL  157 (403)
T ss_pred             cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHH------hcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-HHH
Confidence            2  2  2345567789988888777777777      999999999999999999999999999999988887653 12 


Q ss_pred             -hhHHHHHHHHHHHHHHHHHhccccCCCCCc-cCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh
Q psy10432        177 -APFAVAIPFLLGSTLFIYFCWEEHYDPKTA-KSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE  254 (440)
Q Consensus       177 -~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (440)
                       ..+.....+.....++.. +-.|++.++.. ..++++.+.++.++++..+|+...+....++...+++.-    ..++|
T Consensus       158 ~~v~~~~a~i~~~l~~ia~-wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q----D~iLE  232 (403)
T PF03209_consen  158 IQVIQGVALIALLLNLIAL-WGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQ----DVILE  232 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhh----HHHcC
Confidence             122222222222222222 22344333222 233355667888899999999888777766666665422    22334


Q ss_pred             ccC--------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432        255 VLS--------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF  326 (440)
Q Consensus       255 ~~~--------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (440)
                      .|+        .+...+....+.+.++|-...+++..|+.++++...+++..+.+++..+ .........+      ..-
T Consensus       233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li-i~a~~~~~~~------~~~  305 (403)
T PF03209_consen  233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI-ILAGPLGSPW------LFR  305 (403)
T ss_pred             CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH-HHHHhcccch------HHH
Confidence            443        5566677888889999999999888754788888888888888777665 3333333233      456


Q ss_pred             HHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc---------CccchhhHHHHH
Q psy10432        327 VAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG---------GKLIAIHSVFVV  397 (440)
Q Consensus       327 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~  397 (440)
                      .+..+++++.|++.....+.+.+..++++.|..+|.....+.+...++..  .+ +...         +...+|..+|.+
T Consensus       306 ~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~--~G-G~~~D~~~~~~~~~~~~aY~~VF~l  382 (403)
T PF03209_consen  306 PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTF--LG-GALRDLVRALFGNSPALAYGVVFAL  382 (403)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHH--HH-HHHHHHHHHhccCCcchHHHHHHHH
Confidence            66777888899988888888889988999999999988887776666654  22 1111         235678888888


Q ss_pred             HHHHHHHHHHHHHHhhh
Q psy10432        398 CTACLLVALLASCVFKR  414 (440)
Q Consensus       398 ~~~~~~~~~~~~~~~~~  414 (440)
                      =++..+++..+...+.+
T Consensus       383 Ea~ll~~a~~ll~~l~~  399 (403)
T PF03209_consen  383 EAVLLLAALVLLGRLDR  399 (403)
T ss_pred             HHHHHHHHHHHHHHhhh
Confidence            88888777766655443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG4686|consensus

Probab=99.81  E-value=1.9e-18  Score=144.18  Aligned_cols=378  Identities=15%  Similarity=0.109  Sum_probs=228.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh----hh--HhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHh
Q psy10432         15 RLQVRYFIPFFLATFSDWIQG----PY--VYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYG   87 (440)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~   87 (440)
                      +..+|++...+.++.+.....    |.  -.+.-.|.+++.++..++|++......+...+.|++.|| +|-|..-++-+
T Consensus        38 ~l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~  117 (459)
T KOG4686|consen   38 ALGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILC  117 (459)
T ss_pred             hhhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHH
Confidence            344566666666666511111    11  112225667777787788888877777777899999995 67776655544


Q ss_pred             HHHHHh-hh---hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy10432         88 IVYTLC-CL---TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFT  163 (440)
Q Consensus        88 ~~~~~~-~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~  163 (440)
                      ....++ .+   -+..+.+|.+..+|++.|+|.-..      .++..+++..|++.+|.+.++|+..+..-+|..+--.+
T Consensus       118 ~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESl------AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~l  191 (459)
T KOG4686|consen  118 IFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESL------AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLL  191 (459)
T ss_pred             HHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhh------hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeee
Confidence            445555 33   446789999999999999998776      34556666699999999999999999999998887777


Q ss_pred             HHHHHhhccc----CchhhH---HHHHHHHHHHHHHHH--HhccccCCCCCccCCC--CccchhhhhhhhccCcchHHHH
Q psy10432        164 AHFFADILNL----GPIAPF---AVAIPFLLGSTLFIY--FCWEEHYDPKTAKSSL--LPNSMFSSLKFLFTNPCLLTLG  232 (440)
Q Consensus       164 ~~~l~~~~gw----~~~~~~---~~~~~~~~~~~~~~~--~~~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  232 (440)
                      .+++.+..+-    ..+...   +..........+...  .-+-|++.++.-+.++  ..+..+-.-..-+ .|.+|.+.
T Consensus       192 m~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f-~ppfw~~~  270 (459)
T KOG4686|consen  192 MPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTF-YPPFWVLV  270 (459)
T ss_pred             cHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCccccccccc-CccHHHHH
Confidence            7777665431    001111   111111110111110  1111111111000000  0000000111112 37889988


Q ss_pred             HHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHH
Q psy10432        233 IVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTV  308 (440)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~  308 (440)
                      ++..+.+...+-++..-+..+ +.+|   ..++-+.+.......+.+++.|.++|| .|++...+.+.....+..=..+.
T Consensus       271 iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~~~tl~~H~~l~  349 (459)
T KOG4686|consen  271 IICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASACILTLLGHSGLF  349 (459)
T ss_pred             HHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHHHHHHHHhhhHH
Confidence            888888888877766444444 4444   566677777777777889999999998 99887766555444333222212


Q ss_pred             hhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc
Q psy10432        309 LTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL  388 (440)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~  388 (440)
                      ++...  ++         .++.+.+....+.....+..+...+|+++.|+++|..+.+.|+|-.+.|.+.   +.+.|..
T Consensus       350 Ft~ls--Py---------~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia---g~i~d~~  415 (459)
T KOG4686|consen  350 FTFLS--PY---------TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA---GFIADGD  415 (459)
T ss_pred             hhhcc--HH---------HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh---heeecCC
Confidence            21111  12         2222222234444444666777788999999999999999999999999944   6666632


Q ss_pred             ch---hhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        389 IA---IHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       389 ~~---~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      .+   .+..|..++.+.+....+.+.+.+
T Consensus       416 g~y~~le~ffl~~~~~aL~svgil~~~N~  444 (459)
T KOG4686|consen  416 GSYDNLEAFFLIIGLMALTSVGILFYLNK  444 (459)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence            22   345566666666666666666655

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.81  E-value=3.9e-18  Score=151.52  Aligned_cols=341  Identities=12%  Similarity=0.041  Sum_probs=232.2

Q ss_pred             HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH-h-hhhcccch---hHHHHHHHHHHHHHHhhhccccchh
Q psy10432         52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL-C-CLTKFSSD---FYILLYGRLFGGIATSILFSGFESW  126 (440)
Q Consensus        52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~-~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~  126 (440)
                      .+...+++.+...+.+|+.|.++|+.|+||..+.-.....+ + +...+.++   ++..++...+..++........+++
T Consensus        60 ~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~  139 (438)
T COG2270          60 WGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSM  139 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhH
Confidence            34478888888999999999999999977776554444443 4 44444433   4445667778888888776666666


Q ss_pred             hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHH--HHHHh--------------hcccCchhhHHHHHHHHHHHH
Q psy10432        127 YVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTA--HFFAD--------------ILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~--------------~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      +.      |..++++.++..+.-.....+|..+.-...  ..+..              ..+-..|..+.+.+...++..
T Consensus       140 L~------~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~  213 (438)
T COG2270         140 LP------RLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFA  213 (438)
T ss_pred             hh------hhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHH
Confidence            66      999999888887777666667665543332  11111              012233667777777766666


Q ss_pred             HHHHHhccccCCCCCcc-C--CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC---Cchhh
Q psy10432        191 LFIYFCWEEHYDPKTAK-S--SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGL  262 (440)
Q Consensus       191 ~~~~~~~~e~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~  262 (440)
                      +..++..||.++...+. +  ....++.++.++++++++.+..+.+..++..-+..+... ....|  +.++   .+..+
T Consensus       214 iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~-~~~~fg~~~~gls~~~lll  292 (438)
T COG2270         214 LPMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILA-MGGVFGAADLGLSSTELLL  292 (438)
T ss_pred             hHHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHH-HHHHHHHHHcCccHHHHHH
Confidence            66666666665432111 0  012344566788889999999888888888888776655 34444  2444   56666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432        263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV  342 (440)
Q Consensus       263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  342 (440)
                      +.....+..++|+++.|++.|| ++.|+++..+.+...+.++.. .+...+.         .....-.+.+...|..+..
T Consensus       293 ~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~-~~~~~~~---------~f~i~gll~g~s~G~~qA~  361 (438)
T COG2270         293 IGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYL-IFLEGEL---------DFWILGLLVGTSLGGAQAS  361 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHH-HHccccH---------HHHHHHHHHHHhcchHHHH
Confidence            7777788899999999999997 999999988888777766544 2211111         1122223556678889999


Q ss_pred             HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      ..++..+.+|+++.++.+|+++..+...+.++|.++   +...+...+.+..+....++..++.+.....+
T Consensus       362 SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv---~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~  429 (438)
T COG2270         362 SRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV---AVITQITGSSRAGVLSIIVLLLIGLLLLLRVK  429 (438)
T ss_pred             HHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH---HHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence            999999999999999999999999999999999976   33444233456666666666666655544443

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.71  E-value=5.2e-15  Score=134.89  Aligned_cols=363  Identities=14%  Similarity=0.084  Sum_probs=224.7

Q ss_pred             hhhhhHhhhHhhcC----CChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhccc--chhHH
Q psy10432         33 IQGPYVYKVYKDYG----YDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFS--SDFYI  104 (440)
Q Consensus        33 ~~~~~~~~~~~~~g----~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~--~~~~~  104 (440)
                      +..+....++.+++    .++++...++.......-+...++|+++||+ |+|+.+..|.++..++ ++.+.+  .+...
T Consensus        40 mraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~g  119 (498)
T COG3104          40 MRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGG  119 (498)
T ss_pred             hHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccH
Confidence            34444444454554    8888877666666666666667999999995 9999999999999999 766666  47888


Q ss_pred             HHHHHHHHHHHHhhhccccchhhhccccccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHH
Q psy10432        105 LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVE--WLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVA  182 (440)
Q Consensus       105 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~  182 (440)
                      ++++-.+.++|.|..-|...+++.      |.+|++  +|...++++.++.++|++++|.+.+++.+.+||  ...|..+
T Consensus       120 l~i~L~~I~iG~Gl~K~NiS~llg------~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~--~~gF~~a  191 (498)
T COG3104         120 LYIGLALIIVGTGLFKPNISSLLG------ELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGW--HVGFGLA  191 (498)
T ss_pred             HHHHHHHHHhccccccccHHHHHH------HhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCH--HHHHHHH
Confidence            999999999999999998888888      888877  467789999999999999999999999999999  8888777


Q ss_pred             HHHHHHHHHHHHHhccccCC-----CCCccCCC-Cccch---------hh-------------------------hhhhh
Q psy10432        183 IPFLLGSTLFIYFCWEEHYD-----PKTAKSSL-LPNSM---------FS-------------------------SLKFL  222 (440)
Q Consensus       183 ~~~~~~~~~~~~~~~~e~~~-----~~~~~~~~-~~~~~---------~~-------------------------~~~~~  222 (440)
                      ++-.....+..+. .+....     +++.+.+. .....         ..                         -+.+.
T Consensus       192 avGm~~gl~~f~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~  270 (498)
T COG3104         192 AVGMIIGLVIFLL-GRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEA  270 (498)
T ss_pred             HHHHHHHHHHHHH-ccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7666544443332 232111     11110000 00000         00                         00011


Q ss_pred             ccC-------cchHHHHHHHHHHHhHHHHHHHhhhhh---h----hccC-----CchhhHHHHHHHHHHHHHHHHHHHHh
Q psy10432        223 FTN-------PCLLTLGIVQSIYEGIMYTFIFVWTPV---L----EVLS-----PPLGLVFSCFMISIMIGSKIYSILIL  283 (440)
Q Consensus       223 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~-----~~~g~~~~~~~~~~~~~~~~~g~l~~  283 (440)
                      +++       ++.+..+. .++....++......+..   +    .+++     ...++..+.+.+..++.+++..++..
T Consensus       271 ~~~~~~~~er~r~~~~~~-Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~  349 (498)
T COG3104         271 FRSPKVFDERRRLLAAIP-LFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWT  349 (498)
T ss_pred             hccCccHHHHHHHHHHHH-HHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHh
Confidence            111       12222111 111111122111111111   1    1111     45678888889998888888888776


Q ss_pred             hccCCc-------hhHHHHHHHHHHHHHHHHHh---hhc-cccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCc
Q psy10432        284 KYFKPE-------TMLTLTVYLATFSITVSTVL---TSS-LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIP  352 (440)
Q Consensus       284 r~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p  352 (440)
                      | .+++       .....+..++..+++.+...   ... .+.....    ..+..+.+..++.=+..|...+.+.+..|
T Consensus       350 ~-l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~----~lil~y~l~s~gEL~iSpvGLs~~t~laP  424 (498)
T COG3104         350 K-LGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVW----WLVLSYVLQSFGELFISPVGLSMVTKLAP  424 (498)
T ss_pred             H-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHH----HHHHHHHHHHHHHHHhCHHHHHHHHHhCh
Confidence            4 2222       12345555555555554222   111 1111111    35566666666677788999999999999


Q ss_pred             chhhHHHHHHhhhhhhhHHHHHHHHhhc---cccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        353 EKARATITNWLRVPTNFITCFTLIFIKN---EDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       353 ~~~~g~~~g~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      +...+.+++..-.....+..++..+...   .+...+ .......|..++...++.......
T Consensus       425 ~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~-~~~~~~~F~~~g~v~i~~~~~~~~  485 (498)
T COG3104         425 PALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYT-AFIEGRVFGTIGVVAIVIGILLLL  485 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhceecccccccchhhh-hhhhhhhHHHHHHHHHHHHHHHHH
Confidence            9999999998888877777777652210   011222 445566777777666655554433

>KOG2325|consensus

Probab=99.66  E-value=8.7e-15  Score=134.90  Aligned_cols=369  Identities=15%  Similarity=0.097  Sum_probs=210.6

Q ss_pred             HHHHhhhhhHhhhHhh--cCCChhhHHHHHHHHHHHHhhhhccccccccccch-hHHHHHHhHHHHHh-hhh-cc---cc
Q psy10432         29 FSDWIQGPYVYKVYKD--YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGR-KLICISYGIVYTLC-CLT-KF---SS  100 (440)
Q Consensus        29 ~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~-~~~-~~---~~  100 (440)
                      ...++..+-..+..++  .+.+.+..|++.+...+...+..|..|++..|.+. |+.++.+.++..++ ++. .+   .+
T Consensus        48 v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~  127 (488)
T KOG2325|consen   48 VQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPN  127 (488)
T ss_pred             hhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhccc
Confidence            3344455544444455  77788889998888888788888999999999996 88899999999998 554 22   23


Q ss_pred             -hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--c-----
Q psy10432        101 -DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL--N-----  172 (440)
Q Consensus       101 -~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--g-----  172 (440)
                       .-+.++++|++.|+|.+.. .      ..++++++....++|.|+++....+..+|.++||.++..+....  |     
T Consensus       128 ~~~y~mL~~R~l~Gvg~~n~-a------~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~  200 (488)
T KOG2325|consen  128 GVKYLMLVARILTGVGVGNF-A------VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILP  200 (488)
T ss_pred             chHHHHHHHHHHcCcCcccH-H------HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcC
Confidence             5688899999999998775 2      46667779888999999999999999999999999887764321  1     


Q ss_pred             ---c-CchhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchh---hhhhhhccCcchHHHHH-HHHHHHhHHHH
Q psy10432        173 ---L-GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMF---SSLKFLFTNPCLLTLGI-VQSIYEGIMYT  244 (440)
Q Consensus       173 ---w-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  244 (440)
                         | .+..+-++..++.++..+.+.+..+|.+++.++++..+.++.+   +..+...-+......++ ..+........
T Consensus       201 ~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~  280 (488)
T KOG2325|consen  201 GLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATT  280 (488)
T ss_pred             cceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccchhhhccCChhHHHHHHHHHHHHHHHHHHHH
Confidence               1 2245666777777777777777888877655433211111111   11111111111111111 11111222221


Q ss_pred             HHHhhhhhh-hccC-------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHh--hhc--
Q psy10432        245 FIFVWTPVL-EVLS-------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVL--TSS--  312 (440)
Q Consensus       245 ~~~~~~~~~-~~~~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--  312 (440)
                      ..+..++.. ..++       ...|...+..++..+.-.+......-+++.+|+.+..+........... .+  ...  
T Consensus       281 iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~-~yp~~~~s~  359 (488)
T KOG2325|consen  281 IETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIF-TYPWGFYSG  359 (488)
T ss_pred             HHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhhee-eeecccccc
Confidence            122223332 2222       3334444444444443333333333112344555554433333333222 11  000  


Q ss_pred             cccchhhcc--------------hhHHHHH-HHHHHHhhhchhh----hHHhHhccCCcchhhHHHHHHhhhhhhhHHHH
Q psy10432        313 LFDSRRVLS--------------TNLCFVA-FLIYEISVGMYCP----VTGYLRGRIIPEKARATITNWLRVPTNFITCF  373 (440)
Q Consensus       313 ~~~~~~~~~--------------~~~~~~~-~~~~~~~~g~~~~----~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~  373 (440)
                      +-.......              .....+. +..+....|...|    ...++-+|...++++++..|+++.....+..+
T Consensus       360 pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~  439 (488)
T KOG2325|consen  360 PVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVV  439 (488)
T ss_pred             ccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhh
Confidence            000000000              0000000 1111223444444    56778888999999999999999999999999


Q ss_pred             HHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432        374 TLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS  409 (440)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (440)
                      +|.+.   ..... ..|++..+.+..+..++.....
T Consensus       440 ~~~~~---t~~~~-~~g~~~v~~~~~~~~l~~~~l~  471 (488)
T KOG2325|consen  440 GPIFS---TAIFT-LSGPRPVWIILLCLLLVVAALW  471 (488)
T ss_pred             hHHHH---hhhHH-hcCccHHHHHHHHHHHHHHHHH
Confidence            99854   22333 5566777776665555544433

>KOG2816|consensus

Probab=99.65  E-value=4.9e-14  Score=131.81  Aligned_cols=297  Identities=11%  Similarity=0.076  Sum_probs=198.4

Q ss_pred             HHHHhhhhccccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccc
Q psy10432         60 FASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV  139 (440)
Q Consensus        60 ~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (440)
                      .....+.+|..|.++||+|||..+........+...+.....+|.++    +.++..+....    .....++++|...+
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~----~s~~~a~vadis~~  143 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAI----FSVGFAYVADISSE  143 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhh----hhhhhhheeeccch
Confidence            44555666899999999999999999988888873222222344433    44444333211    12344455599999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCcc---------CCC
Q psy10432        140 EWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAK---------SSL  210 (440)
Q Consensus       140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---------~~~  210 (440)
                      ++|...+|+.+.....+..++|.+++.+.+..|.  ...|.+......+..+.....+||+..+++++         +..
T Consensus       144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~--a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~  221 (463)
T KOG2816|consen  144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI--ALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSL  221 (463)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcc
Confidence            9999999999999999999999999999999887  88899999888888888888999987655443         111


Q ss_pred             Cccchhhhh---hhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-----hccCCchhhHHHHHHHHHHHHHHHHH-HH
Q psy10432        211 LPNSMFSSL---KFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-----EVLSPPLGLVFSCFMISIMIGSKIYS-IL  281 (440)
Q Consensus       211 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~g-~l  281 (440)
                      ......+.+   +....+|..+.+.+...+.......-..-..+++     +....+.+.+.+..+....++..+.. .+
T Consensus       222 ~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l  301 (463)
T KOG2816|consen  222 DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLL  301 (463)
T ss_pred             cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111112222   2222344444444444333322211101011222     22226677777777777778876666 55


Q ss_pred             HhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHH
Q psy10432        282 ILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITN  361 (440)
Q Consensus       282 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g  361 (440)
                      ... ++.++.+..+.....+..... .+....   |       ..+.........+...|...+.....++++++|++++
T Consensus       302 ~~~-l~~~~~i~lGl~~~~~~~~~~-af~~~~---w-------~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~  369 (463)
T KOG2816|consen  302 SSI-LGEKRLISLGLLSEFLQLLLF-AFATET---W-------MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFG  369 (463)
T ss_pred             HHH-HhhhhHhhHHHHHHHHHHHHH-HHhccc---h-------hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhh
Confidence            554 788887777777766665444 322222   2       2333334444577789999999999999999999999


Q ss_pred             HhhhhhhhHHHHHHHHh
Q psy10432        362 WLRVPTNFITCFTLIFI  378 (440)
Q Consensus       362 ~~~~~~~~g~~~~~~~~  378 (440)
                      +...+..+...++|.++
T Consensus       370 ~is~i~~l~~~~~~~~~  386 (463)
T KOG2816|consen  370 IISGIEGLSGVVSPALY  386 (463)
T ss_pred             HHHHHHHHhhhhhHHHH
Confidence            99999999999999865

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.61  E-value=9e-14  Score=131.04  Aligned_cols=367  Identities=11%  Similarity=0.039  Sum_probs=209.4

Q ss_pred             HhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc-----hhHHHHHHhHHHHHh-hhhcc----cchhHHHHH
Q psy10432         38 VYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG-----RKLICISYGIVYTLC-CLTKF----SSDFYILLY  107 (440)
Q Consensus        38 ~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~l~~~~~~~~~~-~~~~~----~~~~~~l~~  107 (440)
                      .+-+.+++|+++++.+....+..+... ..|+.|.++|.+-     ||+-++++.++..++ ...+.    ..+.....+
T Consensus        13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~   91 (433)
T PF03092_consen   13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV   91 (433)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence            334458899999999887766666544 3589999999762     444456666666444 22222    345666677


Q ss_pred             HHHHHHHHHhhhccccchhhhcccccccccc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHH
Q psy10432        108 GRLFGGIATSILFSGFESWYVNEHLNYYLFP--VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPF  185 (440)
Q Consensus       108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~  185 (440)
                      .-++..+|........++.+.      |...  +++|+...+.......+|.+++..++|.+.+..++  +..|.+...+
T Consensus        92 ~l~la~~g~a~~DV~aDa~vv------E~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~--~~~f~i~~~~  163 (433)
T PF03092_consen   92 LLFLASFGYAFADVAADALVV------ELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP--QGVFLISAAL  163 (433)
T ss_pred             HHHHHHHHHHHHHHhhhHHHH------HHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC--eEEehHHHHH
Confidence            778888999998777777777      5542  23478888899999999999999999999998877  6667666655


Q ss_pred             HHHHHHHHHHhccccCCCCCcc-----CC--CC----ccchhhhhhhhccCcchHHHHH-HHHHHHhHHHHH---HHhhh
Q psy10432        186 LLGSTLFIYFCWEEHYDPKTAK-----SS--LL----PNSMFSSLKFLFTNPCLLTLGI-VQSIYEGIMYTF---IFVWT  250 (440)
Q Consensus       186 ~~~~~~~~~~~~~e~~~~~~~~-----~~--~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~  250 (440)
                      ..+..+...+..+|+++.++.+     ++  ..    .++.....++.+++|.++...+ ..++........   ..++.
T Consensus       164 ~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~  243 (433)
T PF03092_consen  164 PLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQ  243 (433)
T ss_pred             HHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEE
Confidence            5555444455555522111110     00  00    1222334556666777776555 222211111000   00000


Q ss_pred             -hhhh---ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432        251 -PVLE---VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF  326 (440)
Q Consensus       251 -~~~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (440)
                       +..+   ......+.+.....++.++|..+..+...+ .+-|+.+....+...+..+.-..+....+.....|.....+
T Consensus       244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l  322 (433)
T PF03092_consen  244 TDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL  322 (433)
T ss_pred             eccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence             0001   111344555666667777787777777765 67777766665555443332211111111001000000111


Q ss_pred             HHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh----hccccccCccchhhHHHHHHHHHH
Q psy10432        327 VAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI----KNEDAEGGKLIAIHSVFVVCTACL  402 (440)
Q Consensus       327 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  402 (440)
                      ..-.+.....++.+-....+..|..|+...|+.+++...+.|+|..++..+-    ...+.-.+...+.....+++.++.
T Consensus       323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~  402 (433)
T PF03092_consen  323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ  402 (433)
T ss_pred             EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence            1112233335554555567888999999999999999999999888777521    111211111233455566666666


Q ss_pred             HHHHHHHHHhhh
Q psy10432        403 LVALLASCVFKR  414 (440)
Q Consensus       403 ~~~~~~~~~~~~  414 (440)
                      ++...+...+++
T Consensus       403 ll~l~ll~lLp~  414 (433)
T PF03092_consen  403 LLPLPLLFLLPP  414 (433)
T ss_pred             HHHHHHHHHcCC
Confidence            666555555554

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.52  E-value=9.9e-14  Score=110.09  Aligned_cols=127  Identities=20%  Similarity=0.342  Sum_probs=107.4

Q ss_pred             hhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhh
Q psy10432         65 IFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLN  143 (440)
Q Consensus        65 l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  143 (440)
                      +.+++.|++.||+|||+.+..+.....++ ......++++.+.+.+++.|++.+...+...+++.      |..|+++|+
T Consensus        13 ~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~   86 (141)
T TIGR00880        13 IYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIA------DIYPPEERG   86 (141)
T ss_pred             HHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHH------HHCChhhhh
Confidence            33469999999999999999988888887 66677789999999999999999998777777777      999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432        144 LTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEE  199 (440)
Q Consensus       144 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e  199 (440)
                      +..+..+....+|..++|.+++.+.+..+|  +..+........+..+...+..||
T Consensus        87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        87 VALGLMSAGIALGPLLGPPLGGVLAQFLGW--RAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             HHHHHHHHhHHHHHHHhHHhHHHHhcccch--HHHHHHHHHHHHHHHHHHhhcCCC
Confidence            999999999999999999999999988888  777777766666555555555554

>TIGR00889 2A0110 nucleoside transporter

Probab=99.51  E-value=4.9e-13  Score=126.34  Aligned_cols=164  Identities=10%  Similarity=0.121  Sum_probs=123.8

Q ss_pred             hhhHhhhHhhcCCCh--------hhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-c---h
Q psy10432         35 GPYVYKVYKDYGYDE--------KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-S---D  101 (440)
Q Consensus        35 ~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~---~  101 (440)
                      ..+.+...++.|.++        ++.+...++......+..++.|+++||+|||+++..+.++.+++ ++.... +   +
T Consensus       228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~  307 (418)
T TIGR00889       228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG  307 (418)
T ss_pred             HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence            344444456666443        45566666666666666679999999999999999999988887 444432 2   2


Q ss_pred             hHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcc----cCch
Q psy10432        102 FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILN----LGPI  176 (440)
Q Consensus       102 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g----w~~~  176 (440)
                      ++.+++.+++.|++.+...+....++.      |.+|+++|++.+++.+ ...++|..+||.++|.+.++.|    +.|+
T Consensus       308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~------~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~  381 (418)
T TIGR00889       308 YALLFLSMIVYGCAFDFFNISGSVFVE------KEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQ  381 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchH
Confidence            456778899999999888776666666      9999999999999997 6788999999999999999853    2338


Q ss_pred             hhHHHHHHHHHHHHHHHHHhccccCCCC
Q psy10432        177 APFAVAIPFLLGSTLFIYFCWEEHYDPK  204 (440)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~  204 (440)
                      ..|.+.+...++..++..+++||+.++.
T Consensus       382 ~~f~~~~~~~~i~~~l~~~~~~~~~~~~  409 (418)
T TIGR00889       382 TMWLFFAGYIAILAVLFMIFFKYSHNAI  409 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            8887777777777777777888875443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.47  E-value=2.2e-12  Score=121.80  Aligned_cols=154  Identities=18%  Similarity=0.216  Sum_probs=115.0

Q ss_pred             hhhhHhhhHhhcCCChhhHHH-HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIAL-LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF  111 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l  111 (440)
                      ...+++..+++.|.+...... .+.++...+.   ++.|++.||+||||.+..+..+.+++ .+..+.++.+.+++.+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (399)
T PRK05122        235 IATFITLYYAARGWDGAALALTLFGVAFVGAR---LLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL  311 (399)
T ss_pred             HHHHHHHHHHHcccccchHHHHHHHHHHHHHH---HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            445555555666654322211 3334444443   58999999999999998888887777 566667888888889999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      .|++.+...|.......      |..|+++|+++.++.+....+|..++|.+.+.+.++.||  +..+...+...++..+
T Consensus       312 ~G~~~~~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~  383 (399)
T PRK05122        312 TGFGFSLVFPALGVEAV------KRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGY--PSIFLAAALAALLGLA  383 (399)
T ss_pred             HHHhHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHH
Confidence            99999988776555566      889999999999999999999999999999999999888  7777777666665554


Q ss_pred             HHHHhccc
Q psy10432        192 FIYFCWEE  199 (440)
Q Consensus       192 ~~~~~~~e  199 (440)
                      ...+ +++
T Consensus       384 ~~~~-~~~  390 (399)
T PRK05122        384 LTWL-LYR  390 (399)
T ss_pred             HHHH-hcc
Confidence            4443 344

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.44  E-value=4.8e-12  Score=120.08  Aligned_cols=162  Identities=12%  Similarity=-0.019  Sum_probs=124.7

Q ss_pred             hhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432         35 GPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG  112 (440)
Q Consensus        35 ~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~  112 (440)
                      ....|...++ +|.++.+.+++.........+..++.|++.||.++++.+..+..+.+++ .+..+.++.+...++.++.
T Consensus       243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (417)
T PRK10489        243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF  322 (417)
T ss_pred             HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence            3445555565 8999888888666555555555569999999988888888888777777 5667788888888888999


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      |++.+...+...+.+.      |..|+++|++++++......+|..+||.+.|.+.+.+|.  +..+...+....+..++
T Consensus       323 g~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~--~~~~~~~~~~~~~~~~~  394 (417)
T PRK10489        323 GYLSAISSLLQYTLLQ------TQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTP--VASASASGFGLLIIGVL  394 (417)
T ss_pred             HHHHHHHHHHHHHHHH------hhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhch--hhHHHHHHHHHHHHHHH
Confidence            9988877555445555      999999999999999999999999999999999999887  66666666655555555


Q ss_pred             HHHhccccCCCC
Q psy10432        193 IYFCWEEHYDPK  204 (440)
Q Consensus       193 ~~~~~~e~~~~~  204 (440)
                      ....+||.++.+
T Consensus       395 ~~~~~~~~~~~~  406 (417)
T PRK10489        395 LLLVLGELRRFR  406 (417)
T ss_pred             HHHhcccccccc
Confidence            566667765433

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.42  E-value=5.4e-12  Score=118.65  Aligned_cols=156  Identities=16%  Similarity=0.088  Sum_probs=114.3

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF  111 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l  111 (440)
                      .....|... +++|.++.+.+.+.........+..++.|+++||+|||+.+..+.....+. ......++.+.+++.+++
T Consensus       235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  314 (393)
T PRK15011        235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL  314 (393)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            334454444 568999988888766655555555579999999999999887776655554 334456777888888988


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      .+++.+...+.......      |..|+ +|+++.++.+...++|..+||.++|.+.+++||  +..+.+.....++..+
T Consensus       315 ~~~~~g~~~~~~~~~~~------~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~--~~~~~~~~~~~~~~~~  385 (393)
T PRK15011        315 NAIYIGILGGIGMLYFQ------DLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY--HAVFWFALVMIIATLF  385 (393)
T ss_pred             HHHHHHHHHHHHHHHHH------HhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHH
Confidence            88877776554444444      77764 699999999999999999999999999998888  7777776666554444


Q ss_pred             HHHHhccc
Q psy10432        192 FIYFCWEE  199 (440)
Q Consensus       192 ~~~~~~~e  199 (440)
                      . .+..||
T Consensus       386 ~-~~~~~~  392 (393)
T PRK15011        386 C-LLRIKD  392 (393)
T ss_pred             H-HHhhcC
Confidence            3 334454

>PRK12382 putative transporter; Provisional

Probab=99.42  E-value=6.2e-12  Score=118.35  Aligned_cols=153  Identities=16%  Similarity=0.172  Sum_probs=116.3

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG  112 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~  112 (440)
                      ...+.+...++.|.+..  +...........+..++.|++.||+||||.+..+..+..++ .+..+.++.+.+++..++.
T Consensus       235 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  312 (392)
T PRK12382        235 IGTFVSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT  312 (392)
T ss_pred             HHHHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence            44555555566666543  33222222233334469999999999999999888888887 5666678888888899999


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      |++.+...|...+.+.      |..|+|+|+++.++.+....+|..+||.+.+.+.++.||  +..|...+...++..+.
T Consensus       313 g~~~~~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~  384 (392)
T PRK12382        313 GAGCSLIFPALGVEVV------KRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGY--PSVFLAGAISAVLGIIV  384 (392)
T ss_pred             HHHHHhHHHHHHHHHH------HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--hHHHHHHHHHHHHHHHH
Confidence            9999887776666666      889999999999999999999999999999999999999  77777777666655554


Q ss_pred             HHHh
Q psy10432        193 IYFC  196 (440)
Q Consensus       193 ~~~~  196 (440)
                      .++.
T Consensus       385 ~~~~  388 (392)
T PRK12382        385 TILS  388 (392)
T ss_pred             HHhh
Confidence            4433

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.42  E-value=2.6e-10  Score=103.73  Aligned_cols=321  Identities=12%  Similarity=0.135  Sum_probs=217.4

Q ss_pred             hhHhhhH--hhcCCChhhHHH----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         36 PYVYKVY--KDYGYDEKNIAL----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        36 ~~~~~~~--~~~g~s~~~~~~----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      |++.+..  .+.|.+..|+.-    ..+-+++...+   +...+.|..+.|++++++.+...+. .+..+.++...+-+.
T Consensus        24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~---~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~  100 (412)
T PF01770_consen   24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLL---PVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLM  100 (412)
T ss_pred             ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHH
Confidence            4444444  347889888874    44555565555   8899999999999999999988888 778888999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      .+..|++.+.. .+..+++-      ...|+++..++.+...+..-+|..++.++|..+...-+.++.....+......+
T Consensus       101 q~~yg~~~a~e-vay~sYiy------s~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~  173 (412)
T PF01770_consen  101 QFFYGLATAAE-VAYYSYIY------SVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSL  173 (412)
T ss_pred             HHHHHHHHHHH-HHHHHHhe------eecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence            99999999886 44444444      888999999999999999999999999999988886555546665665554443


Q ss_pred             HHHHHHHhccccCCC----C-------------Cc--c-CCC------C----c-------cchhhhhhhhccCcchHHH
Q psy10432        189 STLFIYFCWEEHYDP----K-------------TA--K-SSL------L----P-------NSMFSSLKFLFTNPCLLTL  231 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~----~-------------~~--~-~~~------~----~-------~~~~~~~~~~~~~~~~~~~  231 (440)
                      ..+ ..+++|.+++.    +             ++  + ++.      .    .       +...+.++...+||.++..
T Consensus       174 a~~-~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~W  252 (412)
T PF01770_consen  174 ALL-IALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLW  252 (412)
T ss_pred             HHH-HHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHH
Confidence            333 33455654320    0             00  0 000      0    0       0112345566788999888


Q ss_pred             HHHHHHHHhHHHHHHHhhhhhhhcc------CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHH
Q psy10432        232 GIVQSIYEGIMYTFIFVWTPVLEVL------SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITV  305 (440)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~  305 (440)
                      .+-..+...+.+-..++.+...+..      ....|.+-+...+.+.++++..|++..+ +.+..-+.++.....-+.++
T Consensus       253 SlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~-w~~~~~l~l~~~S~l~a~~L  331 (412)
T PF01770_consen  253 SLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVN-WDRWGELALGVFSLLQAGLL  331 (412)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcc-hHHHHHHHHHHHHHHHHHHH
Confidence            8888888888777777677666333      1556788888888888899999998554 55544444444333323222


Q ss_pred             HHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        306 STVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      + . ....+..|      ....+..++.....+..+....-+.+....|.-|.++|+..+..-+-..+-..
T Consensus       332 ~-l-m~~t~~Iw------v~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~  394 (412)
T PF01770_consen  332 F-L-MSFTGNIW------VCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTL  394 (412)
T ss_pred             H-H-HHHhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence            2 1 11111112      45666667666677777777777777778888899999888776655555444

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.42  E-value=2.7e-12  Score=121.59  Aligned_cols=158  Identities=14%  Similarity=0.122  Sum_probs=118.1

Q ss_pred             hhhhHhhhHhhcCCChhh----HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKN----IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      ..+..+...++.+.+..+    .+.+..+..+...+..+..|+++||+|||+.+..+..+..++ ....+.++.+.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (408)
T PRK09874        238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL  317 (408)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence            445554444444333332    223333333444455578999999999999998888877776 556666788888899


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      +++.|++.+...|...+.+.      +..|+++|++.+++.+....+|..+||.++|.+.+..||  +..|.+.+.+.++
T Consensus       318 ~~~~g~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~--~~~f~~~~~~~l~  389 (408)
T PRK09874        318 RFLLGAADGALLPAVQTLLV------YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGF--RAVFLVTAGVVLF  389 (408)
T ss_pred             HHHHHhhhHhhHHHHHHHHH------HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcch--hHHHHHHHHHHHH
Confidence            99999999998777666666      888999999999999999999999999999999999888  8888888777766


Q ss_pred             HHHHHHHhccc
Q psy10432        189 STLFIYFCWEE  199 (440)
Q Consensus       189 ~~~~~~~~~~e  199 (440)
                      ..++.++..++
T Consensus       390 ~~~~~~~~~~~  400 (408)
T PRK09874        390 NAVYSWNSLRR  400 (408)
T ss_pred             HHHHHHHHHHH
Confidence            66655544433

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.41  E-value=5.7e-12  Score=119.20  Aligned_cols=154  Identities=12%  Similarity=0.085  Sum_probs=115.8

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG  112 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~  112 (440)
                      ...+.|.+.++.|.++.+.+.......+...+..++.|+++||+|||+.+..+.....++ .+..+.++.+.+.+..++.
T Consensus       239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (406)
T PRK11551        239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA  318 (406)
T ss_pred             HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence            344566666888999988888776666666666679999999999999988876666666 4555667777777788888


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      |++.+...+...++..      |.+|+++|++..|+.+....+|..+||.++|.+.++.++ +...+.......++..+.
T Consensus       319 g~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~  391 (406)
T PRK11551        319 GLFVVGGQSVLYALAP------LFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRS-TVGVIGASIPVILVAALA  391 (406)
T ss_pred             HHHHHhHHHHHHHHHH------HHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCc-hHHHHHHHHHHHHHHHHH
Confidence            8887776666666666      999999999999999999999999999999999887543 144444444444433333


Q ss_pred             HH
Q psy10432        193 IY  194 (440)
Q Consensus       193 ~~  194 (440)
                      .+
T Consensus       392 ~~  393 (406)
T PRK11551        392 AL  393 (406)
T ss_pred             HH
Confidence            33

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.40  E-value=1.8e-11  Score=114.67  Aligned_cols=146  Identities=12%  Similarity=0.024  Sum_probs=112.0

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG  112 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~  112 (440)
                      ...++|...++.|.++++.+...........+.+++.|++.||+|+|+.+..+.....++ +...  + ........++.
T Consensus       219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~  295 (381)
T PRK03633        219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL  295 (381)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence            345566666778999888888666666666666679999999999999998887777776 3322  2 23344567788


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      |++.....|...+++.      |..|+++++...+......++|..+||.++|++.|++||  +..|.+.+...++..
T Consensus       296 g~~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~--~~~f~~~~~~~l~~~  365 (381)
T PRK03633        296 GAAGFTLYPVAMAWAC------EKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD--NLLFIMIASVSFIYL  365 (381)
T ss_pred             HHHHHhHHHHHHHHHH------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHH
Confidence            8877777787777777      989998888888888889999999999999999999888  777777666555443

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.39  E-value=2.9e-12  Score=121.66  Aligned_cols=150  Identities=13%  Similarity=0.096  Sum_probs=116.9

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhcc
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFS  121 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~  121 (440)
                      ++.+.+..+.+.+.++......+..++.|+++||+|||+.+..+.++.+++ .+..++++.+.+++.+++.|++.+...+
T Consensus       255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~  334 (420)
T PRK09528        255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV  334 (420)
T ss_pred             hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence            344666677787777666665566679999999999999999888888887 6777888999999999999998888755


Q ss_pred             ccchhhhccccccccccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432        122 GFESWYVNEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH  200 (440)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~  200 (440)
                      ....++.      |..|++.|+...+. .+....+|.+++|.+.|++.+.+||  +..|...+.+.++..++.++..+++
T Consensus       335 ~~~~~~~------~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~--~~~f~~~~~~~~i~~~~~~~~~~~~  406 (420)
T PRK09528        335 GVFKYIT------LNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF--QGTYLILGGIVLLFTLISVFTLSGD  406 (420)
T ss_pred             HHHHHHH------HHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc--hHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5444555      88899888887665 5777889999999999999999998  8788776666555555545454443

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.39  E-value=1.4e-11  Score=115.33  Aligned_cols=148  Identities=9%  Similarity=0.019  Sum_probs=122.6

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      +......+.+...+|+|.++.++|.++.++.....+..++.|++.||+|+|+.+.++.+...+. .+.+++++.+.+++.
T Consensus       220 ~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (382)
T TIGR00902       220 AHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLL  299 (382)
T ss_pred             HHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHH
Confidence            3444556676666889999999999888877777777789999999999999999999999998 677889999999999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      ++++|+..+...+....++.      +. |+++|++..++++ ...++|..+||.++|.+.|++|+  . .|...+.+.+
T Consensus       300 q~l~g~~~~~~~~~~~~~i~------~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~--~-~~~~~~~~~~  369 (382)
T TIGR00902       300 QILHCGTFAVCHLAAMRYIA------AQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA--G-TFVFMAIIAA  369 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------hC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--H-HHHHHHHHHH
Confidence            99999999999887666665      87 8999999999986 57789999999999999999876  3 3444444444

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.38  E-value=1.4e-11  Score=122.25  Aligned_cols=129  Identities=16%  Similarity=0.105  Sum_probs=104.0

Q ss_pred             hhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhh
Q psy10432         64 MIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL  142 (440)
Q Consensus        64 ~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  142 (440)
                      .+..++.|+++||+|||++++.+.++.+++ ++.++.++...+++.+++.|++.+...+...++++      |++|.++|
T Consensus       609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a------El~Pt~~R  682 (742)
T TIGR01299       609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV------ELYPSDKR  682 (742)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHcCHHHH
Confidence            333359999999999999999999999988 67778888888888888888888777676666666      99999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432        143 NLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYD  202 (440)
Q Consensus       143 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  202 (440)
                      ++++|+.++...+|.++||.+++.+.+. +.  ..++++.+++.++..++.. .+||+..
T Consensus       683 gta~Gi~~~~~rlGaiigp~i~g~L~~~-~~--~~pf~i~a~~lll~~ll~~-~LPET~~  738 (742)
T TIGR01299       683 ATAFGFLNALCKAAAVLGILIFGSFVGI-TK--AAPILFASAALACGGLLAL-KLPDTRG  738 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh--HHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence            9999999999999999999999988775 33  5677776666655554444 5687653

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.38  E-value=1.1e-11  Score=114.58  Aligned_cols=153  Identities=16%  Similarity=0.134  Sum_probs=128.4

Q ss_pred             HhhhhhHhhhHhhc-CCChhhHHHHHHHHHHHHhhhhccccccccccchhH-HHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         32 WIQGPYVYKVYKDY-GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKL-ICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        32 ~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~-~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      .......+...++. |.++.+.+...........+..++.|++.||+|||+ .+..+..+..++ ......++.+.+.+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  271 (352)
T cd06174         192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVA  271 (352)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence            33445555555554 889999988777777777777789999999999999 999999888888 677778888899999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      .++.|++.+...+...+++.      |..|+++|++.++..+...++|..++|.+.+.+.+..+|  +..+.+.....++
T Consensus       272 ~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~--~~~~~~~~~~~~i  343 (352)
T cd06174         272 LLLLGFGLGFAFPALLTLAS------ELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY--GGVFLILAALALL  343 (352)
T ss_pred             HHHHHHHHhccchhHHHHHH------hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc--chHHHHHHHHHHH
Confidence            99999999999887777777      999999999999999999999999999999999988888  7777777776665


Q ss_pred             HHHH
Q psy10432        189 STLF  192 (440)
Q Consensus       189 ~~~~  192 (440)
                      ..+.
T Consensus       344 ~~i~  347 (352)
T cd06174         344 AALL  347 (352)
T ss_pred             HHHH
Confidence            5443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.38  E-value=4.6e-12  Score=118.50  Aligned_cols=144  Identities=14%  Similarity=0.023  Sum_probs=112.0

Q ss_pred             hhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchh--HHHHHHHHHH
Q psy10432         36 PYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDF--YILLYGRLFG  112 (440)
Q Consensus        36 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~--~~l~~~r~l~  112 (440)
                      ...++..+++|.++++.+....+......+..++.|+++||+|||+.+..+..+..++ .+..+.++.  ..++...++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (377)
T TIGR00890       226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV  305 (377)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence            3444555788888888877666666666666679999999999999998888888777 445555432  3345567788


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      |++.+...+...+++.      |.+|+++|+++.|+.+....+|..++|.+.+.+.+..||  +..|.+.+...+
T Consensus       306 g~~~g~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~f~~~~~~~~  372 (377)
T TIGR00890       306 FFTWGGTISLFPSLVS------DIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGF--EYTFIVTGAFAL  372 (377)
T ss_pred             HHHhccchhccHHHHH------HHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch--hhHHHHHHHHHH
Confidence            8888776555555555      999999999999999999999999999999999999898  777766655544

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.37  E-value=1.5e-11  Score=115.13  Aligned_cols=148  Identities=16%  Similarity=0.149  Sum_probs=112.8

Q ss_pred             hhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHH
Q psy10432         36 PYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGG  113 (440)
Q Consensus        36 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G  113 (440)
                      ...|... +++|.++.+.+..............++.|++.||+|||+.+..+.+...+. ....+.++.+.+.+.+++.|
T Consensus       220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  299 (375)
T TIGR00899       220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA  299 (375)
T ss_pred             hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444443 678999999888766655555555579999999999999988877665555 34455677888888899999


Q ss_pred             HHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432        114 IATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      ++.+...+...++..      |..|+ +++++.++.+....+|..++|.+++.+.+..||  +..+...++..++..+.
T Consensus       300 ~~~g~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~--~~~~~~~~~~~~~~~~~  369 (375)
T TIGR00899       300 IFIGILAGIGMLYFQ------DLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSY--HAVYWFAIVMLIVALFC  369 (375)
T ss_pred             HHHHHHHHHHHHHHH------HhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHH
Confidence            998887665555555      77765 567999999999999999999999999999888  77777766665544443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.37  E-value=4.6e-11  Score=115.65  Aligned_cols=161  Identities=17%  Similarity=0.152  Sum_probs=107.6

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h--h-hcccchhHHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C--L-TKFSSDFYILLYG  108 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~--~-~~~~~~~~~l~~~  108 (440)
                      ...+.|.+. +++|.+..+.+.......+...+..+..|+++||+|||+.+..+.+...+. .  . ...+++...++++
T Consensus       269 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (490)
T PRK10642        269 LLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAG  348 (490)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence            445666665 567888776655444444444444578999999999999988877644432 2  1 2234567778888


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLL  187 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~  187 (440)
                      +++.|++.+...+....++.      |.+|++.|+++++.......++..++|.+.+++.+..+ |  +.++.......+
T Consensus       349 ~~~~g~~~~~~~g~~~~~~~------~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~--~~~~~~~~~~~~  420 (490)
T PRK10642        349 LLMLAVILNCFTGVMASTLP------AMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNL--MMPAYYLMVVAV  420 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------HHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHH
Confidence            99988877665454444555      89999999999998655556667889999998887644 4  555544444444


Q ss_pred             HHHHHHHHhccccCCC
Q psy10432        188 GSTLFIYFCWEEHYDP  203 (440)
Q Consensus       188 ~~~~~~~~~~~e~~~~  203 (440)
                      +..+ ..+++||+++.
T Consensus       421 i~~~-~~~~~pes~~~  435 (490)
T PRK10642        421 IGLI-TGVTMKETANR  435 (490)
T ss_pred             HHHH-HHHHhccccCC
Confidence            3333 34456998764

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.35  E-value=3.9e-11  Score=112.79  Aligned_cols=163  Identities=9%  Similarity=-0.011  Sum_probs=115.5

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-ccchhHHHHHHHH
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-FSSDFYILLYGRL  110 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-~~~~~~~l~~~r~  110 (440)
                      ......|++.+++|.+..+.+....+......+..+..|++.||+|||+.+..+..+..++ .+.. ..++...+.  -+
T Consensus       223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~  300 (393)
T PRK09705        223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AM  300 (393)
T ss_pred             HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HH
Confidence            3455666777788999988888666655555555679999999999999988887777776 3332 233322222  24


Q ss_pred             HHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLLG  188 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~  188 (440)
                      +.|++.+...|.......      +..+ ++++++..+..+....++..++|.+.|++.+..| |  ...+.+.....+.
T Consensus       301 l~g~g~g~~~~~~~~~~~------~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~--~~~~~~~~~~~~~  372 (393)
T PRK09705        301 VCGLGLGGAFPLCLLLAL------DHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNY--LMDWAFHALCVVG  372 (393)
T ss_pred             HHHHhccchHHHHHHHHH------hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHH
Confidence            567777776665444444      6664 6789999999999999999999999999999876 4  6666666655555


Q ss_pred             HHHHHHHhccccCCCCC
Q psy10432        189 STLFIYFCWEEHYDPKT  205 (440)
Q Consensus       189 ~~~~~~~~~~e~~~~~~  205 (440)
                      .........||++++++
T Consensus       373 ~~~~~~~~~~~~~~~~~  389 (393)
T PRK09705        373 LMIITLRFAPARFPQLW  389 (393)
T ss_pred             HHHHHHHhccccccchh
Confidence            55555666677665443

>PRK03545 putative arabinose transporter; Provisional

Probab=99.34  E-value=4.5e-11  Score=112.38  Aligned_cols=153  Identities=13%  Similarity=0.088  Sum_probs=112.9

Q ss_pred             hhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hhcccchhHHHHHHHHHH
Q psy10432         36 PYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LTKFSSDFYILLYGRLFG  112 (440)
Q Consensus        36 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~r~l~  112 (440)
                      .+.+++. ++.|.|..+.++++.+....+.+..++.|+++||+|||+.. .+..+..++ . +....++.+.+.+..++.
T Consensus       226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~  304 (390)
T PRK03545        226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW  304 (390)
T ss_pred             HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence            3444555 44788888888866665555566667999999999988754 444444444 2 344567788888889999


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      |++.+...+...+.+.      +..| ++|++++++.+....+|..+||.++|.+.+++|+  +..+...+.+.++..+.
T Consensus       305 g~~~~~~~~~~~~~~~------~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~--~~~~~~~~~~~~~~~~~  375 (390)
T PRK03545        305 GIAIMCIGLAMQVKVL------KLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGL--SSIGYVGAALALAALVW  375 (390)
T ss_pred             HHHHhcchHHHHHHHH------HhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh--hHHHHHHHHHHHHHHHH
Confidence            9988776565555554      6655 6889999999999999999999999999999999  78887777776666665


Q ss_pred             HHHhcc
Q psy10432        193 IYFCWE  198 (440)
Q Consensus       193 ~~~~~~  198 (440)
                      .....+
T Consensus       376 ~~~~~~  381 (390)
T PRK03545        376 SILIFR  381 (390)
T ss_pred             HHHHcc
Confidence            555443

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.32  E-value=1.4e-08  Score=94.16  Aligned_cols=349  Identities=13%  Similarity=0.103  Sum_probs=187.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhHhhc-CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh-
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVYKDY-GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL-   95 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~-   95 (440)
                      +.....+++..++-+..-..+-+..+. .-+---.+..-..-.+...+++|..|.+.||..|+++...+.+..-++ .+ 
T Consensus         6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s   85 (432)
T PF06963_consen    6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAAS   85 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHH
Confidence            344444555555555544443333333 223222323333444455666789999999999999876665544332 11 


Q ss_pred             -----hccc--c----hhHH---HHHHHHHHHHHHhhhccccchhhhccccccccc------cchhhhHHHHHHHHHHHH
Q psy10432         96 -----TKFS--S----DFYI---LLYGRLFGGIATSILFSGFESWYVNEHLNYYLF------PVEWLNLTFARATFGSGL  155 (440)
Q Consensus        96 -----~~~~--~----~~~~---l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~  155 (440)
                           ..+.  +    +-+.   +++.-.+.|.-.-.. ...    ..-++-+||.      +++++.+.++...-.-.+
T Consensus        86 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La-s~~----~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~  160 (432)
T PF06963_consen   86 CALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA-SIA----NTIAVERDWVVVIAGGDPGALARMNATMRRIDLF  160 (432)
T ss_pred             HHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH-Hhh----hhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence                 1111  1    1121   222222222222222 111    1222333542      466788889999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhc-------ccc---CCCCCccCCCC---------c----
Q psy10432        156 FAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCW-------EEH---YDPKTAKSSLL---------P----  212 (440)
Q Consensus       156 g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-------~e~---~~~~~~~~~~~---------~----  212 (440)
                      .-+++|++.|.+.+..+.  +....+.++..++...+=++.+       |+-   +++++++.+.+         .    
T Consensus       161 ckllaPl~vG~l~t~~s~--~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (432)
T PF06963_consen  161 CKLLAPLFVGLLMTFASP--VIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSIL  238 (432)
T ss_pred             HHHHHHHHHHHHhhccCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHH
Confidence            999999999999998776  5555555555544444333222       221   11110000000         0    


Q ss_pred             -------cchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh---ccCCchhhHHHHHHHHHHHHHHHHHHHH
Q psy10432        213 -------NSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE---VLSPPLGLVFSCFMISIMIGSKIYSILI  282 (440)
Q Consensus       213 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~  282 (440)
                             +...++|+..+++|.++. .+...+.+.....+-.....+..   ..+...|..-+...+.++.|+++..++.
T Consensus       239 ~~~~~~~~~~~~~w~~Y~~q~vfla-s~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~  317 (432)
T PF06963_consen  239 KRLWNPLRTIIRGWRTYFRQPVFLA-SFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLM  317 (432)
T ss_pred             HHHHHHHHHHhccHHHHHhCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   111234555566665444 33333333333333222233332   2236678888888899999999999999


Q ss_pred             hhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH
Q psy10432        283 LKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW  362 (440)
Q Consensus       283 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~  362 (440)
                      +| +|..|.-.++......+..........+..+.........+.+..+.-++.=.+=....-+++|.+|+++||+..|+
T Consensus       318 ~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv  396 (432)
T PF06963_consen  318 KR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV  396 (432)
T ss_pred             HH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence            97 99999877777655544333211111111110010001223333333322222334667888999999999999999


Q ss_pred             hhhhhhhHHHHHHH
Q psy10432        363 LRVPTNFITCFTLI  376 (440)
Q Consensus       363 ~~~~~~~g~~~~~~  376 (440)
                      -+...++...+.-.
T Consensus       397 q~sl~~lf~ll~~~  410 (432)
T PF06963_consen  397 QNSLQSLFELLSFV  410 (432)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999888777665

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.31  E-value=2.6e-11  Score=108.39  Aligned_cols=144  Identities=15%  Similarity=0.092  Sum_probs=118.5

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.|.+.+...+..-++.++.|.++|| .++|+.+..+++++++..+++.. ..         .+....+...+.+...|
T Consensus        64 ~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gf-s~---------s~~~~~~l~~lng~fQg  132 (448)
T COG2271          64 TQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGF-SP---------SLFLFAVLWVLNGWFQG  132 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhh-hh---------HHHHHHHHHHHHHHHhc
Confidence            889999999999999999999999998 99999999999999998877622 11         11134455557788899


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ..+|.....+....|+++||+..++.|+..|+|+.+.|.+..- +...+ +.+++..|++-+++.++..++.+...|
T Consensus       133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~-~~~w~~~f~~pgiiaiival~~~~~~r  207 (448)
T COG2271         133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAF-HGGWRAAFYFPGIIAIIVALILLFLLR  207 (448)
T ss_pred             CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHh-ccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999885522 44555 668999999999888777776666555

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.28  E-value=9.7e-11  Score=113.27  Aligned_cols=159  Identities=16%  Similarity=0.142  Sum_probs=109.0

Q ss_pred             hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc---c--cc------hh
Q psy10432         35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK---F--SS------DF  102 (440)
Q Consensus        35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~---~--~~------~~  102 (440)
                      ..+.+.+.+++|.+..+.++..........+..++.|+++||+|||+.+..+..+..++ .+..   .  .+      +.
T Consensus       304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (481)
T TIGR00879       304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN  383 (481)
T ss_pred             HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence            33455556888988877766666666666666679999999999999998887777666 3332   1  12      22


Q ss_pred             HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHH
Q psy10432        103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVA  182 (440)
Q Consensus       103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~  182 (440)
                      ..+....+..+.......+.....+.      |.+|+++|++++++.+....+|.+++|.+.+.+.++.+|  +..|++.
T Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~--~~~f~~~  455 (481)
T TIGR00879       384 VAIVFILLFIAFFAMGWGPVPWVIVS------EIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGV--GGVFIFF  455 (481)
T ss_pred             HHHHHHHHHHHHHHccccCeehhhhh------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cceehhH
Confidence            22333333322222222243333444      999999999999999999999999999999999998888  6666666


Q ss_pred             HHHHHHHHHHHHHhccccC
Q psy10432        183 IPFLLGSTLFIYFCWEEHY  201 (440)
Q Consensus       183 ~~~~~~~~~~~~~~~~e~~  201 (440)
                      +.+.++..+...+..||++
T Consensus       456 ~~~~~~~~i~~~~~~~~~~  474 (481)
T TIGR00879       456 GGLNVLGLIFVYFFLPETK  474 (481)
T ss_pred             HHHHHHHHHHHheecccCC
Confidence            6666655555555666654

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.26  E-value=3.4e-11  Score=115.27  Aligned_cols=148  Identities=15%  Similarity=0.032  Sum_probs=113.0

Q ss_pred             hhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc--chhHHHHH--HhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         35 GPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF--GRKLICIS--YGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        35 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l~~--~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      ..++++..+++|.+..+.+.+.++..+...+..++.|+++||.  ++|+...+  +....+++ .+....++++.+++.+
T Consensus       261 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~  340 (455)
T TIGR00892       261 IIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC  340 (455)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence            3455666678899999998877777777777778999999983  44443333  33333444 3556678888889999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~~  188 (440)
                      ++.|++.+...+...+.+.      |.+|++++++.+++.+...++|..+||.++|.+.+.. +|  +..|.+.+++.++
T Consensus       341 ~~~G~~~g~~~~~~~~~~~------~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~--~~~f~~~~~~~li  412 (455)
T TIGR00892       341 IFFGLSFGSVGALLFEVLM------DLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY--KYIFYASGSIVVS  412 (455)
T ss_pred             HHHHHHhchHHHHHHHHHH------HHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCc--chHHHHhhHHHHH
Confidence            9999999888776666666      9999999999999999999999999999999999877 47  6666666555444


Q ss_pred             HH
Q psy10432        189 ST  190 (440)
Q Consensus       189 ~~  190 (440)
                      ..
T Consensus       413 ~~  414 (455)
T TIGR00892       413 AG  414 (455)
T ss_pred             HH
Confidence            33

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.26  E-value=2.8e-10  Score=108.49  Aligned_cols=135  Identities=10%  Similarity=0.050  Sum_probs=104.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..+++++.|++.|| +++|+.+..+.....++.+.. ...   ...+      .......+.+++.|
T Consensus        58 ~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~---~~~~------~l~~~~~l~g~~~g  126 (434)
T PRK11663         58 SDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILF-GFS---SSLW------AFALLWVLNAFFQG  126 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHH-HHH---hHHH------HHHHHHHHHHHHHH
Confidence            678899999999999999999999998 999999888888777766544 221   1111      22333334556677


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+....++.+.+|+++|++++|+.+...++|..++|.+.   +.+.+ ..+++..|.+.++..++..+
T Consensus       127 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~gw~~~f~~~~i~~~~~~~  192 (434)
T PRK11663        127 WGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVV---GAIAL-HYGWRYGMMIAGIIAIVVGL  192 (434)
T ss_pred             ccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-cccHHHHHHHHHHHHHHHHH
Confidence            77888889999999999999999999999999999999844   55666 77899999887766554433

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.25  E-value=8.4e-11  Score=114.34  Aligned_cols=139  Identities=14%  Similarity=0.068  Sum_probs=101.7

Q ss_pred             hhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc--cchhHHHHHHHH
Q psy10432         35 GPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF--SSDFYILLYGRL  110 (440)
Q Consensus        35 ~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~--~~~~~~l~~~r~  110 (440)
                      ..++|.+. +++|.+..+.+.+.........+..++.|+++||+|||+++..+..+..+. .....  .++.+.+.+..+
T Consensus       295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (496)
T PRK03893        295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF  374 (496)
T ss_pred             HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence            34566666 588999999998777777766666689999999999999988877666655 32222  234444444555


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAV  181 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~  181 (440)
                      +.+.......+...+++.      |.+|+++|++.+++......+|..+||.++|.+.+.+||  +..+..
T Consensus       375 ~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~--~~~~~~  437 (496)
T PRK03893        375 FQQMLGQGISGLLPKLIG------GYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDL--GTALAS  437 (496)
T ss_pred             HHHHHhcccchhhHHHHH------hhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCCh--HHHHHH
Confidence            544443333344444445      999999999999999999999999999999999999888  555533

>PRK03699 putative transporter; Provisional

Probab=99.25  E-value=1.3e-10  Score=109.29  Aligned_cols=152  Identities=13%  Similarity=-0.029  Sum_probs=111.8

Q ss_pred             HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      ......+.|.+. +++|.|+.+.+...+.......+..+..|+++||++||+.+.....+..+. .+....++.+.+.+.
T Consensus       221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (394)
T PRK03699        221 QLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYA  300 (394)
T ss_pred             HHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence            334455676666 567999998888666555555555569999999999999988777666665 455566777777777


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      .++.|++.+...+...+...      +..| +++++..+.......+|..++|.+.|.+.+..|+  +..++.......+
T Consensus       301 ~~~~G~~~~~~~~~~~~~~~------~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~--~~~~~~~~~~~~~  371 (394)
T PRK03699        301 ILGLGFFSSAIYTTIITLGS------QQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGL--QAALLTANGLYAV  371 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------HHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCc--hhhhhhhHHHHHH
Confidence            88889888777665554444      5554 4567788888888999999999999999999898  7676666655554


Q ss_pred             HHH
Q psy10432        189 STL  191 (440)
Q Consensus       189 ~~~  191 (440)
                      ..+
T Consensus       372 ~~~  374 (394)
T PRK03699        372 VFV  374 (394)
T ss_pred             HHH
Confidence            433

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.25  E-value=1.2e-10  Score=112.00  Aligned_cols=150  Identities=9%  Similarity=0.000  Sum_probs=103.4

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h--hhcccchhHHHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C--LTKFSSDFYILLYGR  109 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~--~~~~~~~~~~l~~~r  109 (440)
                      .....|... +++|.|..+.++..........+..++.|+++||+|||+.+.....+..++ .  .....++.+...+.+
T Consensus       277 ~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T PRK09556        277 IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASL  356 (467)
T ss_pred             HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence            344565544 668999988887666666556666679999999999998876654443333 2  223345666666778


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHh------------hcccCch
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGL-FAIVSGFTAHFFAD------------ILNLGPI  176 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~------------~~gw~~~  176 (440)
                      ++.|++.............      |.+|+++|+++.|+.+...++ |..++|.+.|.+.+            ..||  +
T Consensus       357 ~~~G~~~~~~~~~~~~~~~------~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~--~  428 (467)
T PRK09556        357 FALGFLVFGPQLLIGVAAV------GFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGW--A  428 (467)
T ss_pred             HHHHHHHhhHHHHHHHHHH------hhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccCh--H
Confidence            8888654332121122334      999999999999999999886 77999999999999            4567  7


Q ss_pred             hhHHHHHHHHHHHHH
Q psy10432        177 APFAVAIPFLLGSTL  191 (440)
Q Consensus       177 ~~~~~~~~~~~~~~~  191 (440)
                      ..|.+..+..++..+
T Consensus       429 ~~f~~~~~~~~~~~~  443 (467)
T PRK09556        429 GTFAALDIAAIGCIC  443 (467)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            777666555544433

>KOG3098|consensus

Probab=99.24  E-value=1.4e-08  Score=94.17  Aligned_cols=314  Identities=12%  Similarity=0.038  Sum_probs=175.2

Q ss_pred             HHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccc
Q psy10432         56 YIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYY  135 (440)
Q Consensus        56 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~  135 (440)
                      ..+-+..-.+...+.+.+.|+.|.|..+.++...+..--+..+-+|-+.+++...+.|+|.+....      ..-.++++
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~------GqG~ylt~  129 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWT------GQGGYLTS  129 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheec------ccceehhh
Confidence            344444444444589999999999999999999998874444566788889999999999999844      44455559


Q ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cCch-h----------hHHHHHHHHHHHHH--HHHHh
Q psy10432        136 LFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN------LGPI-A----------PFAVAIPFLLGSTL--FIYFC  196 (440)
Q Consensus       136 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g------w~~~-~----------~~~~~~~~~~~~~~--~~~~~  196 (440)
                      ..++|++.+..++.......+.++|..+-..+..+-+      -..+ .          ...+..++..+..+  ....+
T Consensus       130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~  209 (461)
T KOG3098|consen  130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF  209 (461)
T ss_pred             cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee
Confidence            9999999999999999999998888765544322110      0000 0          00111111111011  11111


Q ss_pred             ccccCCCCCccCC-CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--h-ccC----CchhhHHHHHH
Q psy10432        197 WEEHYDPKTAKSS-LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--E-VLS----PPLGLVFSCFM  268 (440)
Q Consensus       197 ~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~----~~~g~~~~~~~  268 (440)
                      .|.+.....++.. ....+..+..-+++++|+++.+.............+...++..+  . ..+    ...++.....+
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g  289 (461)
T KOG3098|consen  210 LPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIG  289 (461)
T ss_pred             cCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHh
Confidence            2221111111111 01111122223455667766654444333222222222222222  1 112    33455555666


Q ss_pred             HHHHHHHHHHHHHHhh--ccCCchhHHHHHHHHHHHHHHHHHhhhccc--------cchhhcchhHHHHHHHHHHHhhhc
Q psy10432        269 ISIMIGSKIYSILILK--YFKPETMLTLTVYLATFSITVSTVLTSSLF--------DSRRVLSTNLCFVAFLIYEISVGM  338 (440)
Q Consensus       269 ~~~~~~~~~~g~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~  338 (440)
                      ++.+++....+.+.+|  ++|+++.+..+..+.....++.........        .....|......+...+.+++-..
T Consensus       290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~  369 (461)
T KOG3098|consen  290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC  369 (461)
T ss_pred             HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence            7777777777777766  577888877777776666655422211100        001111122233333345555555


Q ss_pred             hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        339 YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       339 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      .....+....... +++|.++.++...-..+.+.++-.
T Consensus       370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f  406 (461)
T KOG3098|consen  370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFF  406 (461)
T ss_pred             HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhh
Confidence            6777777888877 577777777777777766666554

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.24  E-value=2.6e-10  Score=106.81  Aligned_cols=144  Identities=11%  Similarity=0.053  Sum_probs=112.9

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFG  112 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~  112 (440)
                      ...+.+...+|.|.++.++|.+..++.....+..++.|++.||+|+|+.+..+.+..+++ .+....++.+.+++..++.
T Consensus       224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (382)
T PRK11128        224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH  303 (382)
T ss_pred             HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            444555555789999999998888777766666689999999999999999998888887 5677788999999999999


Q ss_pred             HHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHH
Q psy10432        113 GIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLL  187 (440)
Q Consensus       113 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~  187 (440)
                      |++.+...+....+..      +. +++++++..+..+ ...++|..+||.++|.+.|.+|+  . .++..+.+.+
T Consensus       304 g~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~-~~~~~~~~~~  369 (382)
T PRK11128        304 CGTFTVCHLAAMRYIA------AR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--G-VFWVMALVAL  369 (382)
T ss_pred             HHHHHHHHHHHHHHHH------HC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--H-HHHHHHHHHH
Confidence            9999988665555544      65 5667788888886 55678889999999999999886  3 4444443333

>PRK10054 putative transporter; Provisional

Probab=99.24  E-value=3.5e-10  Score=106.35  Aligned_cols=169  Identities=12%  Similarity=0.013  Sum_probs=118.5

Q ss_pred             cchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q psy10432        226 PCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF  301 (440)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~  301 (440)
                      |.++.+.+..++...+.+......++++ +..+   .+.|+..+...++.+++++..|+++|| +++|+.+..+.....+
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~~   85 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFAS   85 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHHH
Confidence            4455666666666666665555455555 3334   778999999999999999999999998 9999988887777666


Q ss_pred             HHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc
Q psy10432        302 SITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE  381 (440)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~  381 (440)
                      +.+.+ .+..+   .+      ..+....+.+...+...+....+..|..|+++|++++|+.+...++|..++|.+.   
T Consensus        86 ~~~~~-~~~~~---~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~---  152 (395)
T PRK10054         86 GFIAI-PLVNN---VT------LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLG---  152 (395)
T ss_pred             HHHHH-HHHhH---HH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence            55444 22111   11      1223333344445556777888889999999999999999999999999999843   


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        382 DAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      +.+.+  .+++..|...+++.+++.+...
T Consensus       153 ~~l~~--~g~~~~f~~~~~~~~i~~i~~~  179 (395)
T PRK10054        153 TLLVM--QSINLPFWLAAICSAFPLVFIQ  179 (395)
T ss_pred             HHHHH--hccCcHHHHHHHHHHHHHHHHH
Confidence            44433  4678888888777766654443

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.21  E-value=3.3e-10  Score=106.50  Aligned_cols=153  Identities=12%  Similarity=-0.001  Sum_probs=107.8

Q ss_pred             HHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhh-hccccccccccchhHHHHHHhHHHHHh-hh-hc-----ccch
Q psy10432         30 SDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIF-GIVVGSIADKFGRKLICISYGIVYTLC-CL-TK-----FSSD  101 (440)
Q Consensus        30 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~-~~-----~~~~  101 (440)
                      +......+.++..+|.|.+++++|+++.+......+. .++.|++.||+|+|+.+..+..+.+.. .. ..     ..++
T Consensus       223 ~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  302 (390)
T TIGR02718       223 TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPG  302 (390)
T ss_pred             HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCc
Confidence            3444555666666889999999999776654433333 369999999999999988876655333 21 11     1233


Q ss_pred             hHHHHHHHHHHHHHHhhhccccchhhhccccccccccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432        102 FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV-EWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA  180 (440)
Q Consensus       102 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~  180 (440)
                      ...++....+.+++.+...+...+.+.      +..++ +++++.++..+...++|..+||.++|.+.++.|+  +..|.
T Consensus       303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~--~~~f~  374 (390)
T TIGR02718       303 IAVAWSCSAFGSLITGITSVAIYTAFM------RFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGY--AGGFL  374 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--HHHHH
Confidence            444455555666666666555555555      66665 7899999999999999999999999999999888  77777


Q ss_pred             HHHHHHHHHH
Q psy10432        181 VAIPFLLGST  190 (440)
Q Consensus       181 ~~~~~~~~~~  190 (440)
                      ....+.++..
T Consensus       375 ~~~~~~l~a~  384 (390)
T TIGR02718       375 SGTVLAVLAI  384 (390)
T ss_pred             HHHHHHHHHH
Confidence            7665555433

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.21  E-value=4e-10  Score=107.61  Aligned_cols=152  Identities=16%  Similarity=0.141  Sum_probs=106.7

Q ss_pred             hhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        249 WTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       249 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      ..|.+++.+   .+.++..+...++..++.+..|++.|| +++|+.+..+..+..++.+.. .......... .    ..
T Consensus        49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~----~l  121 (438)
T TIGR00712        49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLM-GFVPWATSSI-A----IM  121 (438)
T ss_pred             hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHH-hccccccchH-H----HH
Confidence            445553233   778899999999999999999999997 999998888777776665544 2111100111 1    23


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA  405 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (440)
                      .....+.+++.+...+.....+.+.+|+++|++++|+.+...++++.+++.+. + ....+ ..+|+..|.+.++..++.
T Consensus       122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~-~-~~~~~-~~~w~~~f~~~~~~~~i~  198 (438)
T TIGR00712       122 FVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV-L-LGMAW-FNDWHAALYFPAICAIIV  198 (438)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH-H-HHHHH-hhhhHHHHHHHHHHHHHH
Confidence            33344556667777777778888999999999999999999999999888744 1 12223 467899999888776665


Q ss_pred             HHHHH
Q psy10432        406 LLASC  410 (440)
Q Consensus       406 ~~~~~  410 (440)
                      .+..+
T Consensus       199 ~~~~~  203 (438)
T TIGR00712       199 ALFAF  203 (438)
T ss_pred             HHHHH
Confidence            54433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.20  E-value=3.4e-10  Score=105.39  Aligned_cols=145  Identities=11%  Similarity=0.052  Sum_probs=109.7

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++.+++.++.|++.|| +|||+.+..+..+..++................     ..+....+.+++.+
T Consensus        34 ~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~g~~~~  107 (365)
T TIGR00900        34 SVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVLPFVALLGGLNIW-----QVYVLAGILAIAQA  107 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHH-----HHHHHHHHHHHHHH
Confidence            678999999999999999999999998 999999888877766655444222111111111     34455556667788


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ...+...+++.|..|+++|++.+|..+....+|..++|.+  + +.+.+ ..+++..|.+.++..+++.+.....
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~-~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~  178 (365)
T TIGR00900       108 FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI--G-GLMYA-TLGIKWAIWVDAVGFAISALLIVSV  178 (365)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHH--H-HHHHH-HhhHHHHHHHHHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999999984  3 55666 6788888888777666655544443

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.19  E-value=4.7e-10  Score=105.33  Aligned_cols=139  Identities=10%  Similarity=0.115  Sum_probs=107.2

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| +++|+.+..+.....++.+.. ...   +. ..     .......+.+++.+
T Consensus        40 ~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~-~~~---~~-~~-----~~~~~~~l~g~~~~  108 (385)
T TIGR00710        40 SIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGL-ALS---NN-IE-----TLLVLRFVQAFGAS  108 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHH-HHH---cc-HH-----HHHHHHHHHHcchh
Confidence            678999999999999999999999998 999999888887777766554 211   11 11     23444455566677


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      ...+....++.|..|+++|+++.+..+....++..++|.+.   +.+.+ ..+++..+.+.++..++..+....
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~---~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~  178 (385)
T TIGR00710       109 AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLG---GYILV-WLSWHAIFAFLSLAGILLSALIFF  178 (385)
T ss_pred             HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HcCHHHHHHHHHHHHHHHHHHHHH
Confidence            77888889999999999999999999999999999999843   55656 678898888877766665554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK09952 shikimate transporter; Provisional

Probab=99.19  E-value=1.1e-09  Score=104.46  Aligned_cols=160  Identities=13%  Similarity=0.100  Sum_probs=103.3

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc---c-chhHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF---S-SDFYILLY  107 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~---~-~~~~~l~~  107 (440)
                      ...+.|... +++|.+.........+....+.+..++.|+++||+||||.++.+.++..++ .....   . ++.+.+++
T Consensus       269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (438)
T PRK09952        269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF  348 (438)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence            334454433 567888765544333344444445579999999999999988876665554 22211   2 23444455


Q ss_pred             HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432        108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFL  186 (440)
Q Consensus       108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~  186 (440)
                      ..++.+++.+...+...+++.      |.+|++.|+...++... +..+|..++|.+.+++.+..+..+..++.......
T Consensus       349 ~~~l~~~~~~~~~~~~~~~~~------e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~  422 (438)
T PRK09952        349 SIMLANIAHDMVVCVQQPMFT------EMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC  422 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------HHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence            667777887776665556666      99999999999888654 45589999999999998865322366666555555


Q ss_pred             HHHHHHHHHhcccc
Q psy10432        187 LGSTLFIYFCWEEH  200 (440)
Q Consensus       187 ~~~~~~~~~~~~e~  200 (440)
                      ++..+.. ..++|+
T Consensus       423 ~i~~v~~-~~~~~~  435 (438)
T PRK09952        423 LISAMTA-LLMKDN  435 (438)
T ss_pred             HHHHHHH-HHcccc
Confidence            5444433 345653

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.19  E-value=2.2e-10  Score=107.83  Aligned_cols=142  Identities=16%  Similarity=0.196  Sum_probs=106.0

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHH-h-h-hhc--ccchhHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTL-C-C-LTK--FSSDFYILLY  107 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~-~-~~~--~~~~~~~l~~  107 (440)
                      ...+.|.+. +++|.++.+.+...........+..++.|+++||+|||+.+..+..+..+ + . ...  ..++.+.++.
T Consensus       238 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (394)
T TIGR00883       238 ITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFF  317 (394)
T ss_pred             HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence            445666665 67888888888877777777777778999999999999987754443332 2 1 222  2356677777


Q ss_pred             HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHH
Q psy10432        108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARA-TFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAI  183 (440)
Q Consensus       108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~  183 (440)
                      ..++.|++.+...+...+.+.      |.+|+++|+++.++. +....+|..++|.+++.+.++.| |  +..++...
T Consensus       318 ~~~~~g~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~--~~~~~~~~  387 (394)
T TIGR00883       318 LVLGLALIGGMYTGPMGSFLP------ELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDW--YAIGYYLA  387 (394)
T ss_pred             HHHHHHHHHHHHhhhHHHHHH------HhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcc--hhHHHHHH
Confidence            888899988888777777777      999999999999984 56667899999999999999988 7  54444333

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.18  E-value=8.5e-10  Score=102.14  Aligned_cols=137  Identities=16%  Similarity=0.244  Sum_probs=111.4

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      ..+.++..+...++..++.++.|++.|| +|+|+.+..+..+.+++.+.. .+.   ...+      ..+....+.+++.
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~-~~~---~~~~------~~~~~~~l~g~~~   99 (352)
T PF07690_consen   31 PSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLL-AFA---SNFW------LLLIARFLLGIGS   99 (352)
T ss_dssp             SHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHH-HHH---CCHH------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHh-hhh---hhHH------HHhhhcccccccc
Confidence            3778999999999999999999999998 999999998888888874444 221   1112      2455555677777


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      +...+....++.|..|+++|++.++..+...++|..++|.+  + +.+.+ ..+++..|.+.++..++..++
T Consensus       100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~-~~l~~-~~~~~~~~~~~~~~~~~~~il  167 (352)
T PF07690_consen  100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLL--G-GFLIS-YFGWRWAFLISAILSLIAAIL  167 (352)
T ss_dssp             HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHH--H-HHCCC-HCHHCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhhccccccchhhhhhhcccch--h-hhhhh-ccccccccccccchhhhhhhh
Confidence            88999999999999999999999999999999999999984  3 66666 788999999998888887664

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.18  E-value=4.3e-09  Score=101.60  Aligned_cols=155  Identities=12%  Similarity=0.217  Sum_probs=107.9

Q ss_pred             hHhhhH-hhcCCChhhHHHHH-HHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhccc-chhHHHHHHH
Q psy10432         37 YVYKVY-KDYGYDEKNIALLY-IAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFS-SDFYILLYGR  109 (440)
Q Consensus        37 ~~~~~~-~~~g~s~~~~~~~~-~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~-~~~~~l~~~r  109 (440)
                      ..++.. +++|.|.++++... ..+.....+..++.|+++||+|||+.+.++.++.+++ .   ..... ++.+.+...-
T Consensus       244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~  323 (491)
T PRK11010        244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV  323 (491)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence            344443 56899999999876 3555555555579999999999999877666554443 2   12232 4555555556


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGS  189 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~  189 (440)
                      +++.++.+...+...+...      +..+++.+++..++.+...++|..+++.+.|.+.+.+||  +..|.+.....++.
T Consensus       324 ~l~~~~~g~~~~~~~a~~~------~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~--~~~f~~~~~~~l~~  395 (491)
T PRK11010        324 FFENLCGGMGTAAFVALLM------TLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGW--PTFYLFSVAAAVPG  395 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHH------HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHH
Confidence            6655555555444444555      888888999999999999999999888999999999898  77777776666655


Q ss_pred             HHHHHHhcccc
Q psy10432        190 TLFIYFCWEEH  200 (440)
Q Consensus       190 ~~~~~~~~~e~  200 (440)
                      .+.... ++++
T Consensus       396 l~~~~~-~~~~  405 (491)
T PRK11010        396 LLLLLV-CRQT  405 (491)
T ss_pred             HHHHHH-HHhc
Confidence            444433 3443

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.17  E-value=5.1e-10  Score=105.33  Aligned_cols=153  Identities=15%  Similarity=-0.010  Sum_probs=102.9

Q ss_pred             HHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhH--HHH------HHhHHHHHh-hhhcccc
Q psy10432         31 DWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKL--ICI------SYGIVYTLC-CLTKFSS  100 (440)
Q Consensus        31 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~--~l~------~~~~~~~~~-~~~~~~~  100 (440)
                      ......+.|... +++|.++.+.++......+...+..++.|+++||+|||+  ...      .+.....+. ......+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (399)
T TIGR00893       231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN  310 (399)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence            333445555554 567888888888777777777667789999999999996  111      111111111 1222233


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhH
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPF  179 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~  179 (440)
                      +.+.......+.+.+.+ ..+...+++.      |..|+++|+++.++.+....+|..++|.+.+.+.+..| |  +..+
T Consensus       311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~--~~~~  381 (399)
T TIGR00893       311 IPYAALALVALGFFGLG-AGAIGWALIS------DNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF--AGAL  381 (399)
T ss_pred             hHHHHHHHHHHHHhchh-hhhHHHHHHH------hhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch--hHHH
Confidence            44444444444444444 5566566666      99999999999999999999999999999999999887 7  6666


Q ss_pred             HHHHHHHHHHHHH
Q psy10432        180 AVAIPFLLGSTLF  192 (440)
Q Consensus       180 ~~~~~~~~~~~~~  192 (440)
                      ...+...++..+.
T Consensus       382 ~~~~~~~~~~~~~  394 (399)
T TIGR00893       382 MVVAALALIGALS  394 (399)
T ss_pred             HHHHHHHHHHHHH
Confidence            6665555544443

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.17  E-value=6.5e-10  Score=106.77  Aligned_cols=177  Identities=11%  Similarity=0.104  Sum_probs=125.3

Q ss_pred             cCcchHH-HHHHHHHHHhHHHHHHHhhhhhhhc---cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHH
Q psy10432        224 TNPCLLT-LGIVQSIYEGIMYTFIFVWTPVLEV---LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTV  296 (440)
Q Consensus       224 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~  296 (440)
                      ++|+... +.+..++...+++......+.++..   .+   .+.+.......++..+++++.|++.||++|+|+.+..+.
T Consensus         7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~   86 (475)
T TIGR00924         7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG   86 (475)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH
Confidence            4444443 4444444455555554544545432   33   678999999999999999999999995369999999999


Q ss_pred             HHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch---hhHHHHHHhhhhhhhHHHH
Q psy10432        297 YLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK---ARATITNWLRVPTNFITCF  373 (440)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~  373 (440)
                      .+..++.+.+ .+..  + .+      ...++..+.+++.|...|...+++.+..|++   +|++++++.+...++|..+
T Consensus        87 ~~~~~g~~~~-~~~~--~-~~------~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i  156 (475)
T TIGR00924        87 IVLMLGHFML-AMSI--Y-PD------LIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI  156 (475)
T ss_pred             HHHHHHHHHH-Hhcc--c-Hh------HHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH
Confidence            8888877555 2211  1 11      2344555566677888888888888888765   4888999999999999999


Q ss_pred             HHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        374 TLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +|.+.   +.+.+ ..+++..|.++++..+++.+.....++
T Consensus       157 g~~l~---g~l~~-~~g~~~~f~~~~~~~~~~~l~~~~~~~  193 (475)
T TIGR00924       157 SPLLA---GVIAE-NYGYHVGFNLAAVGMVIGLLTFFAGRH  193 (475)
T ss_pred             HHHHH---HHHHH-hcChHHHHHHHHHHHHHHHHHHHHccc
Confidence            99944   66767 778999999888766666555444443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.17  E-value=1e-09  Score=99.48  Aligned_cols=169  Identities=16%  Similarity=0.229  Sum_probs=131.7

Q ss_pred             hHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHH
Q psy10432        228 LLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSIT  304 (440)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~  304 (440)
                      .+.+.+..+......+......+++-++.+   ..+|...+.+..+..+++++...+.|| ++||+.+.....+..++-+
T Consensus        15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lFi~~n~   93 (394)
T COG2814          15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLALFIVSNL   93 (394)
T ss_pred             HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHH
Confidence            344555555555555555454555555444   788999999999999999999999997 9999999998888888876


Q ss_pred             HHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccc
Q psy10432        305 VSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAE  384 (440)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~  384 (440)
                      .. .         ..|+....+++=.+.++..|.+++.......+.+|+++|+++.++......+...+|..  .+ .++
T Consensus        94 l~-a---------lAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvP--LG-t~i  160 (394)
T COG2814          94 LS-A---------LAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVP--LG-TFL  160 (394)
T ss_pred             HH-H---------HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhcc--HH-HHH
Confidence            65 2         22222245555556677899999999999999999999999999999999999999887  44 666


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        385 GGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      .| .+||+..|...+++.+++.+..+.
T Consensus       161 g~-~~GWR~~F~~ia~l~ll~~~~~~~  186 (394)
T COG2814         161 GQ-LFGWRATFLAIAVLALLALLLLWK  186 (394)
T ss_pred             HH-HhhHHHHHHHHHHHHHHHHHHHHH
Confidence            67 999999999999888877665544

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.15  E-value=3.2e-09  Score=99.75  Aligned_cols=144  Identities=15%  Similarity=0.168  Sum_probs=109.8

Q ss_pred             hhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        249 WTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       249 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      .+++.++.+   .+.++..+...++..+++++.|++.|| +|||+.+..+..+..++.+.. ...   +..+      ..
T Consensus        43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~-~~~---~~~~------~l  111 (394)
T PRK10213         43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAVLLTLSCLLV-SFA---NSFS------LL  111 (394)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHHHHHHHHHHH-HHH---ChHH------HH
Confidence            344444444   677888889999999999999999997 999999998888887766544 221   1111      23


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA  405 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (440)
                      +..-.+.+++.+...|....++.|.+|+++|+++.+......+++..++|.+  + +.+.+ ..+++..|.+.+++.+++
T Consensus       112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l--~-~~l~~-~~gw~~~f~~~~~l~~~~  187 (394)
T PRK10213        112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPL--G-SFLGE-LIGWRNVFNAAAVMGVLC  187 (394)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHh-hcCHHHHHHHHHHHHHHH
Confidence            4444456667777888889999999999999999999999999999999984  3 66666 778999998877665554


Q ss_pred             HH
Q psy10432        406 LL  407 (440)
Q Consensus       406 ~~  407 (440)
                      .+
T Consensus       188 ~l  189 (394)
T PRK10213        188 IF  189 (394)
T ss_pred             HH
Confidence            43

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.14  E-value=1.4e-09  Score=103.23  Aligned_cols=150  Identities=13%  Similarity=0.131  Sum_probs=119.6

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchh--HHHHHHhHHHHHh-hhhcc--------cchhHHHHHHHHH
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRK--LICISYGIVYTLC-CLTKF--------SSDFYILLYGRLF  111 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr--~~l~~~~~~~~~~-~~~~~--------~~~~~~l~~~r~l  111 (440)
                      +++|.+..+...+..+..+.+.+.+.++|++.||+|.|  ++++.+..++.+. +...+        .++.+.+++.-++
T Consensus       310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~  389 (477)
T PF11700_consen  310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL  389 (477)
T ss_pred             HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence            68999999988777777777777778999999999999  8888888777554 32222        5677889999999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTL  191 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~  191 (440)
                      .|+..|..++..-+++.      +..|+++.+..+|++....-....+||++-+.+.+..| ..|..+....++.++..+
T Consensus       390 ~G~~~G~~qs~sRs~~~------~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl~  462 (477)
T PF11700_consen  390 IGLFMGGIQSASRSLFS------RLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGLI  462 (477)
T ss_pred             HHHHhhhHHHHHHHHHH------HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHH
Confidence            99999999886666666      99999999999999999999999999999999999876 236777666666655444


Q ss_pred             HHHHhcccc
Q psy10432        192 FIYFCWEEH  200 (440)
Q Consensus       192 ~~~~~~~e~  200 (440)
                      +. ..++++
T Consensus       463 ll-~~v~~~  470 (477)
T PF11700_consen  463 LL-FFVDVE  470 (477)
T ss_pred             HH-hhccch
Confidence            43 444544

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.14  E-value=2.5e-09  Score=102.72  Aligned_cols=149  Identities=15%  Similarity=0.125  Sum_probs=117.4

Q ss_pred             hhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHH
Q psy10432         36 PYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGG  113 (440)
Q Consensus        36 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G  113 (440)
                      ..+|.+. +++|.++...|++.+...+...+.+...+++.+|+++++.+..+.+..+++ ...+++++.+..++..++.|
T Consensus       239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G  318 (524)
T PF05977_consen  239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAG  318 (524)
T ss_pred             HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            3454444 678999999988544333333333348899999999999998898888888 68899999999999999999


Q ss_pred             HHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHH
Q psy10432        114 IATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      ++........++.+-      +..|++.|||+++++++....+..+|..+.|.+.+.+|.  +..+.+.++..++..++
T Consensus       319 ~~~~~~~~~~~t~~Q------~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~--~~al~~a~~~lll~~~~  389 (524)
T PF05977_consen  319 AAWIIANSSLNTLVQ------LSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGV--RTALLIAGAALLLSALI  389 (524)
T ss_pred             HHHHHHHHHHHHHHH------HhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHH
Confidence            999888665555555      999999999999999999999999999999999999888  66666665544444443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.13  E-value=1.9e-09  Score=101.30  Aligned_cols=164  Identities=12%  Similarity=0.168  Sum_probs=113.9

Q ss_pred             CcchHHHHHHHHHHHhHHHHHHHhhhhhhhcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q psy10432        225 NPCLLTLGIVQSIYEGIMYTFIFVWTPVLEVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF  301 (440)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~  301 (440)
                      +|.++.+.+..++...+........++...+.   ....++..+...+...+..++.|++.|| ++||+.+..+..+..+
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~   80 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLL   80 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHH
Confidence            45666666666665554333333334444222   2567888899999999999999999998 9999999999888776


Q ss_pred             HHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc
Q psy10432        302 SITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE  381 (440)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~  381 (440)
                      +.+.+ ....       .     ..+...+.+++.+...|...+++.|.+|+|+|++++|+.+...+.+..+||.+  + 
T Consensus        81 ~~~~~-~~~~-------~-----~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~l--g-  144 (393)
T PRK11195         81 GCLLM-LFGI-------H-----PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVL--G-  144 (393)
T ss_pred             HHHHH-HHHH-------H-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--H-
Confidence            65443 2111       0     12222345666888999999999999999999999999999999999999983  4 


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        382 DAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      +.+.+ . .+...+.+.+.+.+++.+
T Consensus       145 G~l~~-~-~~~~~~~i~~~~~~~~~~  168 (393)
T PRK11195        145 GALAD-P-HAEAALAVCALIYLLAAL  168 (393)
T ss_pred             HHHHH-H-HHHHHHHHHHHHHHHHHH
Confidence            66655 3 255555555544444433

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.13  E-value=8.3e-10  Score=106.92  Aligned_cols=158  Identities=16%  Similarity=0.071  Sum_probs=103.4

Q ss_pred             hHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--ch-hH-HHHHHHHH
Q psy10432         37 YVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SD-FY-ILLYGRLF  111 (440)
Q Consensus        37 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~-~~-~l~~~r~l  111 (440)
                      +.|.+.++.|.+....++......+...+..++.|+++||+|||+.++.+..+.+++ .+....  ++ .+ ....+.++
T Consensus       293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~  372 (479)
T PRK10077        293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF  372 (479)
T ss_pred             HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence            446666888887665554433344444444569999999999999999998888877 433221  11 11 22233444


Q ss_pred             HHHHHhhh-ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH------HhhcccCchhhHHHHHH
Q psy10432        112 GGIATSIL-FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFF------ADILNLGPIAPFAVAIP  184 (440)
Q Consensus       112 ~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~gw~~~~~~~~~~~  184 (440)
                      .+.+.+.. .|...+++.      |.+|+++|++++|+......+|.++++.+.+.+      .+..+|  +..|++.++
T Consensus       373 ~~~~~~~~~~~~~~~~~~------e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~  444 (479)
T PRK10077        373 YVAAFAMSWGPVCWVLLS------EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN--GFSYWIYGC  444 (479)
T ss_pred             HHHHHhccccchhHHHhH------hhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC--ccHHHHHHH
Confidence            44444432 244445555      999999999999999999999988886665544      356677  666766666


Q ss_pred             HHHHHHHHHHHhccccCC
Q psy10432        185 FLLGSTLFIYFCWEEHYD  202 (440)
Q Consensus       185 ~~~~~~~~~~~~~~e~~~  202 (440)
                      ..++..++.++..||+++
T Consensus       445 ~~~~~~~~~~~~~~e~~~  462 (479)
T PRK10077        445 MGVLAALFMWKFVPETKG  462 (479)
T ss_pred             HHHHHHHHHHhccccCCC
Confidence            656556666666677643

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.13  E-value=2.8e-09  Score=100.39  Aligned_cols=162  Identities=9%  Similarity=0.044  Sum_probs=116.7

Q ss_pred             HHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432        231 LGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS  306 (440)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~  306 (440)
                      .....++...+.+......++++ +..+   ...|+..+...+...+.+++.|++.|| +++|+.+..+.....++.+..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~   93 (400)
T PRK11646         15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATM   93 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHH
Confidence            33445555555555545455555 3333   778888888888888889999999998 999999998888888777655


Q ss_pred             HHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432        307 TVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  386 (440)
                       ...   +..+      ...+...+.+++.+...|...+.+.+..|+|+|+++.|+.+...++|..++|.+.   +.+. 
T Consensus        94 -~~~---~~~~------~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~---g~l~-  159 (400)
T PRK11646         94 -AIA---HEPW------LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG---SWLL-  159 (400)
T ss_pred             -HHh---ccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-
Confidence             221   1112      2344444555566677788888899999999999999999999999999999843   4444 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHH
Q psy10432        387 KLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                       ..+++..|.+.++..++..++
T Consensus       160 -~~g~~~~f~~~~~~~~~~~i~  180 (400)
T PRK11646        160 -QYDFRLVCATGAVLFVLAAAF  180 (400)
T ss_pred             -HhhHHHHHHHHHHHHHHHHHH
Confidence             347888888877766655444

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.12  E-value=3.1e-09  Score=99.61  Aligned_cols=168  Identities=12%  Similarity=0.167  Sum_probs=118.3

Q ss_pred             cchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432        226 PCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS  302 (440)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~  302 (440)
                      +.++......+.............++..++.+   .+.++..+...++..++.++.|++.|| +++|+.+..+.....++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~   81 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVIG   81 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHH
Confidence            33444444444444444443333333334444   668899999999999999999999997 99999999888888777


Q ss_pred             HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccc
Q psy10432        303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNED  382 (440)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~  382 (440)
                      .+.. ...   +..+      ..++.-.+.+++.+...+.......+..|+++|+++++.......++..++|.+  + +
T Consensus        82 ~~l~-~~~---~~~~------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~-~  148 (382)
T PRK10091         82 NAMF-TLS---SSYL------MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPL--G-T  148 (382)
T ss_pred             HHHH-HHh---CcHH------HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccH--H-H
Confidence            6554 221   1111      244444556666676777777888899999999999999998888999998873  3 5


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        383 AEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      .+.+ ..+++..|.+.++..++..+.
T Consensus       149 ~l~~-~~gwr~~f~~~~~~~~~~~~~  173 (382)
T PRK10091        149 YLSQ-EFSWRYTFLLIAVFNIAVLAS  173 (382)
T ss_pred             HHhh-hccHHHHHHHHHHHHHHHHHH
Confidence            5666 678999999888766555443

>TIGR00897 2A0118 polyol permease family

Probab=99.12  E-value=4.1e-09  Score=99.51  Aligned_cols=162  Identities=10%  Similarity=0.002  Sum_probs=104.1

Q ss_pred             cchHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432        226 PCLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS  302 (440)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~  302 (440)
                      +.+....+..++............+++.++.+   .+.++..+...++..++.++.|++.|| +++|+.+..+..+..++
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~~~~   91 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLWCVG   91 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHH
Confidence            33444455555555544433344555554443   788999999999999999999999998 99999998888877776


Q ss_pred             HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH-HHHHHHhhcc
Q psy10432        303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT-CFTLIFIKNE  381 (440)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~~~~  381 (440)
                      .+.......... .+.     ..+....+.+++.+...+.....+.+..|+++|++++|+.+...++|. ..+|.+  + 
T Consensus        92 ~~~~~~~~~~~~-~~~-----~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~--~-  162 (402)
T TIGR00897        92 HAAFIVFGLGHA-NYP-----LILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY--S-  162 (402)
T ss_pred             HHHHHHHhccCc-cHH-----HHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--H-
Confidence            543311111111 121     123333334444555555666677788899999999999999999886 567763  3 


Q ss_pred             ccccCccchhhHHHHHH
Q psy10432        382 DAEGGKLIAIHSVFVVC  398 (440)
Q Consensus       382 ~~~~~~~~~~~~~~~~~  398 (440)
                      +.+.+ ..+++..++..
T Consensus       163 ~~l~~-~~g~~~~~~~~  178 (402)
T TIGR00897       163 SYAIP-AFGEMNTLWSA  178 (402)
T ss_pred             Hhccc-ccchHHHHHHH
Confidence            45555 55644444433

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.11  E-value=2.9e-09  Score=100.24  Aligned_cols=137  Identities=15%  Similarity=0.125  Sum_probs=102.2

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| +|+|+.+..+.....++.... ...  ++  ..     .......+.+++.+
T Consensus        38 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~-~~~--~~--~~-----~~~~~~~l~g~~~~  106 (392)
T PRK10473         38 AQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLC-SLA--ET--SS-----LFLAGRFLQGIGAG  106 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHH-HHh--Cc--HH-----HHHHHHHHHHhhhh
Confidence            567888888899999999999999998 999999888877776666544 211  11  11     23333344555566


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS  409 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (440)
                      ...+.....+.|..|+++|+++.+..+....++..++|.+  + +...+ ..+++..+.+.++..++..++.
T Consensus       107 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i--~-~~l~~-~~g~~~~~~~~~~~~~i~~~~~  174 (392)
T PRK10473        107 CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL--G-HLIML-KFPWQSLFYTMAAMGILVLLLS  174 (392)
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHh-CcChHHHHHHHHHHHHHHHHHH
Confidence            6777788899999999999999999999999998888874  3 44545 6688888888877666655544

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.11  E-value=2.2e-09  Score=101.79  Aligned_cols=174  Identities=12%  Similarity=0.065  Sum_probs=120.0

Q ss_pred             chHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHHHHHHHHH
Q psy10432        227 CLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLTVYLATF  301 (440)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~~~~~~~~  301 (440)
                      .++.............|......+.++ +..+   .+.+...........++.+++|+++|| + |+|+.+..+.++..+
T Consensus        10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR-ilGrrr~iliG~il~~l   88 (493)
T PRK15462         10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK-VLGNRMAVMLGALLMAI   88 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHH
Confidence            344445555555555555544333333 2223   667778888888888999999999998 8 999999888888877


Q ss_pred             HHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhHHHHHHHHhh
Q psy10432        302 SITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFITCFTLIFIK  379 (440)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~~  379 (440)
                      +.+.+ ....  ....      ....+..+...+.|...+...+++.|.+|++  +|.+++++.....++|+.++|.+. 
T Consensus        89 g~lll-~~~~--~~~~------~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~-  158 (493)
T PRK15462         89 GHVVL-GASE--IHPS------FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC-  158 (493)
T ss_pred             HHHHH-HHhh--cchh------HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH-
Confidence            76544 2111  0001      1233333444556777787788899998875  799999999999999999999955 


Q ss_pred             ccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        380 NEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                        +.+.+ ..+++..|.++++.++++.+.....++
T Consensus       159 --g~L~~-~~Gw~~~F~iaaigm~l~li~~~~~~~  190 (493)
T PRK15462        159 --GYAQE-EYSWAMGFGLAAVGMIAGLVIFLCGNR  190 (493)
T ss_pred             --HHHHh-hhChHHHHHHHHHHHHHHHHHHHHhhh
Confidence              66766 778999999987766666655544343

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.10  E-value=3.3e-09  Score=100.29  Aligned_cols=138  Identities=12%  Similarity=0.089  Sum_probs=105.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.|+..+...++..++++..|++.|| +|+|+.+..+.++..++.+.. .+..+    ..     ..+..-.+.+++.+
T Consensus        43 ~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~-~~~~~----~~-----~l~~~r~l~G~~~~  111 (412)
T TIGR02332        43 TMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLWGIASTAT-MFATG----PE-----SLYLLRILVGIAEA  111 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHHHHHHHHH-HHhcC----HH-----HHHHHHHHHHHHHh
Confidence            778999999999999999999999998 999999888887777766554 22111    11     23444445666777


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc------CccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG------GKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      ...|....++.|.+|+++|+++.|+.+....+|..+++.+.   +.+.      + ..+|+..|.+.++..++...+.+
T Consensus       112 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~---~~l~~~~~~~~-~~gwr~~f~~~~~~~l~~~~~~~  186 (412)
T TIGR02332       112 GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS---GYILALDGLMA-LKGWQWLFLLEGFPSVILGVMTW  186 (412)
T ss_pred             hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCCCCCC-ccchhHHHHHHHHHHHHHHHHHh
Confidence            78888888899999999999999999999999999988743   3222      3 46899999998776655444433

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.10  E-value=3.7e-09  Score=99.98  Aligned_cols=135  Identities=12%  Similarity=0.088  Sum_probs=101.2

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      ..+.++..+...++..++.++.|++.|| +|+|+.+..+.....++.+.. .+.  +  .+.     ..+....+.+++.
T Consensus        46 ~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~-~~~--~--~~~-----~l~~~~~l~G~~~  114 (405)
T TIGR00891        46 TVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIVLFSAGTLAC-GFA--P--GYI-----TMFIARLVIGIGM  114 (405)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH-HHh--c--cHH-----HHHHHHHHHHhhh
Confidence            3778999999999999999999999998 999999888877776665444 221  1  111     2344445666667


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccc--hhhHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLI--AIHSVFVVCTACLLVAL  406 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  406 (440)
                      +...+....++.|..|+++|+++.++.+....+|..+++.+.   +...+ ..  +++..|.+.++..++..
T Consensus       115 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~---~~l~~-~~~~~w~~~f~~~~~~~~~~~  182 (405)
T TIGR00891       115 GGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVY---SLVVP-VWGDGWRALFFISILPIIFAL  182 (405)
T ss_pred             hhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHH---HHHHH-hcCccHHHHHHHHHHHHHHHH
Confidence            778888889999999999999999999999999999998843   33433 33  37888877655544443

>PRK10504 putative transporter; Provisional

Probab=99.10  E-value=2.7e-09  Score=103.05  Aligned_cols=171  Identities=10%  Similarity=0.099  Sum_probs=119.8

Q ss_pred             chHHHHHHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432        227 CLLTLGIVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI  303 (440)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~  303 (440)
                      .++...+..++.....+......+.+.+..+   .+.++..+...++..++.++.|++.|| +++|+.+..+.....++.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~   89 (471)
T PRK10504         11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTLGS   89 (471)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHH
Confidence            3455555554444444444333333334444   566778888888999999999999997 999998887776666655


Q ss_pred             HHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccc
Q psy10432        304 TVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDA  383 (440)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~  383 (440)
                      +.. .+.   ...+      .....-.+.+++.+...|.....+.+..|+++|+++.|+.+...+++..++|.+  + +.
T Consensus        90 ~~~-~~~---~~~~------~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~-g~  156 (471)
T PRK10504         90 LFC-ALS---GTLN------ELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL--G-GL  156 (471)
T ss_pred             HHH-HHh---CCHH------HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH--H-HH
Confidence            443 211   1111      234444566667777888888889999999999999999999999999999984  3 66


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        384 EGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      +.+ ..+|+..|.+......++.+.....
T Consensus       157 l~~-~~gw~~~f~~~~~~~~l~~~~~~~~  184 (471)
T PRK10504        157 LVE-YASWHWIFLINIPVGIIGAIATLML  184 (471)
T ss_pred             HHh-hccHHHHHHHHHHHHHHHHHHHHHh
Confidence            777 7789999998877666655554433

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.09  E-value=1.1e-11  Score=119.16  Aligned_cols=346  Identities=14%  Similarity=0.075  Sum_probs=3.0

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----c-----
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----S-----  100 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~-----  100 (440)
                      .......+..+.++|+++.++.|++.+..-+...+..++..++.+|..|-|.+-.|.++.+++ +++++-    +     
T Consensus        19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~   98 (539)
T PF03137_consen   19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE   98 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence            333444555677899999999998666655555555568999999988888888888888887 443220    0     


Q ss_pred             -----------------------------------------hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccc
Q psy10432        101 -----------------------------------------DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV  139 (440)
Q Consensus       101 -----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (440)
                                                               -+..++++.++.|+|....++...+++=      |.+++
T Consensus        99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD------Dnv~~  172 (539)
T PF03137_consen   99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID------DNVSK  172 (539)
T ss_dssp             -----------------------------------------------------SSS------------------------
T ss_pred             cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec------ccccc
Confidence                                                     0245788999999999999776555555      99999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------cc--CchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432        140 EWLNLTFARATFGSGLFAIVSGFTAHFFADIL------------------NL--GPIAPFAVAIPFLLGSTLFIYFCWEE  199 (440)
Q Consensus       140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------gw--~~~~~~~~~~~~~~~~~~~~~~~~~e  199 (440)
                      ++-+.-+|+..+...+|..+|-++++.+.+.+                  .|  .|-.-|++.+.+.++..+....+ |+
T Consensus       173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk  251 (539)
T PF03137_consen  173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PK  251 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence            99999999999999999999999998875432                  12  01233444444444444444333 33


Q ss_pred             cCCCC---------Cc-c------C----C-------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhh
Q psy10432        200 HYDPK---------TA-K------S----S-------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV  252 (440)
Q Consensus       200 ~~~~~---------~~-~------~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (440)
                      +.++.         ++ +      +    +       ...++.....+++++||.+....+...........+.++.+.+
T Consensus       252 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKy  331 (539)
T PF03137_consen  252 KLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKY  331 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22111         00 0      0    0       0112334456778999999988888777777766665645555


Q ss_pred             h-hccC---CchhhHHHHHHH-HHHHHHHHHHHHHhh-ccCCchhHHHHHHHHHHHHHH---HHHh-hhcc-----ccch
Q psy10432        253 L-EVLS---PPLGLVFSCFMI-SIMIGSKIYSILILK-YFKPETMLTLTVYLATFSITV---STVL-TSSL-----FDSR  317 (440)
Q Consensus       253 ~-~~~~---~~~g~~~~~~~~-~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~-----~~~~  317 (440)
                      + .+++   ..++++.....+ +.++|.+++|.+.+| +.+.|..+....+...+..+.   .+.. ....     +..+
T Consensus       332 lE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y  411 (539)
T PF03137_consen  332 LESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPY  411 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCcc
Confidence            5 3333   444554444333 566888999999987 344556666555555554433   1111 0000     0000


Q ss_pred             -------h-------------------h------c---chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH
Q psy10432        318 -------R-------------------V------L---STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW  362 (440)
Q Consensus       318 -------~-------------------~------~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~  362 (440)
                             .                   .      .   .....+..+.+..+..+..........-+.+|+++|+.+.|+
T Consensus       412 ~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv  491 (539)
T PF03137_consen  412 HNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGV  491 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhH
Confidence                   0                   0      0   000111111222233333444445566688899999999999


Q ss_pred             hhhhhhh-HHHHHHHHhhccccccC
Q psy10432        363 LRVPTNF-ITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       363 ~~~~~~~-g~~~~~~~~~~~~~~~~  386 (440)
                      ......+ |..-+|+++   |.+.|
T Consensus       492 ~~~~~rllg~IPgPIif---G~iiD  513 (539)
T PF03137_consen  492 QWLIIRLLGFIPGPIIF---GAIID  513 (539)
T ss_dssp             -------------------------
T ss_pred             HHHHHHhhcCcchHHHH---hHHHh
Confidence            8876654 567778755   66766

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=99.09  E-value=1.3e-06  Score=82.41  Aligned_cols=256  Identities=14%  Similarity=0.130  Sum_probs=148.7

Q ss_pred             HhhhHhhcCC-----ChhhHHHHHHHHHHHHhhh-hccccccccccchhHHHHHHhHHHHHh-hhhccc-----ch----
Q psy10432         38 VYKVYKDYGY-----DEKNIALLYIAGFASSMIF-GIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-----SD----  101 (440)
Q Consensus        38 ~~~~~~~~g~-----s~~~~~~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-----~~----  101 (440)
                      +-++-+.+.+     ..+.+.++.....+...+. .++.+++++|++|++++-.....+... .++++.     +.    
T Consensus        26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~  105 (472)
T TIGR00769        26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT  105 (472)
T ss_pred             HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence            4344555554     3356777777777776666 589999999999999976655544443 222221     11    


Q ss_pred             ----------------------hHHHHHHHHHHHHHHhhhcc-ccchhhhccccccccccchhhhHHHHHHHHHHHHHHH
Q psy10432        102 ----------------------FYILLYGRLFGGIATSILFS-GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAI  158 (440)
Q Consensus       102 ----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~  158 (440)
                                            .|..-+..+...+-.....+ ...+.+.      |.++.+|-.|.+++...+.++|.+
T Consensus       106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan------di~t~~qakRfy~l~~~ganlg~i  179 (472)
T TIGR00769       106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN------QITTIDEAKRFYALFGLGANVALI  179 (472)
T ss_pred             HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCHHHHHHHHHHHHHHHHHHHH
Confidence                                  12222223333333333322 3333445      999999999999999999999999


Q ss_pred             HHHHHHHHHHhhc--------ccCch--hhHHHHHHHHHHHHHHHHHhccccCCC-C-------CccCCCCccchhhhhh
Q psy10432        159 VSGFTAHFFADIL--------NLGPI--APFAVAIPFLLGSTLFIYFCWEEHYDP-K-------TAKSSLLPNSMFSSLK  220 (440)
Q Consensus       159 ~g~~~~~~l~~~~--------gw~~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~-~-------~~~~~~~~~~~~~~~~  220 (440)
                      +++.+..++.+..        .|...  ..+.+...... ..+.+.+.+.+...+ +       ++++++.+.+..++++
T Consensus       180 ~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k  258 (472)
T TIGR00769       180 FSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGL-AIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLK  258 (472)
T ss_pred             HHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHH
Confidence            9999988887421        12111  12222222222 223333333221110 0       1112223445678999


Q ss_pred             hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH
Q psy10432        221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT  293 (440)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~  293 (440)
                      .++++|.++.+.+...+...........|-... +.++      ...|......++..++..++.+++.+| +|-+....
T Consensus       259 ~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~-~Gw~~~a~  337 (472)
T TIGR00769       259 FLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK-YGWLTAAL  337 (472)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence            999999888877776666555544434444443 2222      334555555566666667777999997 88877666


Q ss_pred             HHHHHHHH
Q psy10432        294 LTVYLATF  301 (440)
Q Consensus       294 ~~~~~~~~  301 (440)
                      +.-+...+
T Consensus       338 i~Pii~li  345 (472)
T TIGR00769       338 ITPLVMLL  345 (472)
T ss_pred             HHHHHHHH
Confidence            55555544

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>TIGR00895 2A0115 benzoate transport

Probab=99.09  E-value=1.8e-09  Score=101.80  Aligned_cols=136  Identities=16%  Similarity=0.180  Sum_probs=103.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++.+++.++.|++.|| +++|+.+..+..+..++.+.. ...   . ...     .......+.+++.+
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~-~~~---~-~~~-----~~~~~~~~~g~~~~  120 (398)
T TIGR00895        52 VQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFSVFTLLC-ALA---T-NVT-----QLLILRFLAGLGLG  120 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHHHHHHHH-HHc---c-chH-----HHHHHHHHHhcccc
Confidence            667888899999999999999999998 999999888887776665544 221   1 111     24444556666777


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      ...+...+++.|..|+++|+++.++.+....+|..+++.+.   +.+.+ ..+++..+.+.++..++..++
T Consensus       121 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~g~~~~~~~~~~~~~~~~~~  187 (398)
T TIGR00895       121 GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA---GWLIP-VFGWRSLFYVGGIAPLLLLLL  187 (398)
T ss_pred             cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH---HHHhh-cccceeehhhhhhHHHHHHHH
Confidence            78889999999999999999999999999999999999844   55666 667888888776444444333

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.09  E-value=5.2e-09  Score=101.49  Aligned_cols=140  Identities=13%  Similarity=0.014  Sum_probs=106.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+.+.++.....+..|++.|| +|+|+.+..+.....++.+.. ...   +. ..     ..+.+-.+.+++.+
T Consensus        41 ~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~~~~~~-~~a---~~-~~-----~li~~r~l~G~g~~  109 (495)
T PRK14995         41 NELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGLASLAA-AFS---PT-AS-----WLIATRALLAIGAA  109 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH-HHc---CC-HH-----HHHHHHHHHHHHHH
Confidence            678889999999999999999999998 999999999888888777555 221   11 11     23444445556666


Q ss_pred             chhhhHHhHhccC-CcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        338 MYCPVTGYLRGRI-IPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       338 ~~~~~~~~~~~~~-~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ...|.....+.+. .|+++|++++|+......+|..++|.  .+ +.+.+ ..+|++.|++...+.++..++....
T Consensus       110 ~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~--lg-g~l~~-~~gwr~~f~i~~~~~~~~~~l~~~~  181 (495)
T PRK14995        110 MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPL--VG-GILLE-HFYWGSVFLINVPIVLVVMGLTARY  181 (495)
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHhhc-cCChHHHHHHHHHHHHHHHHHHHHh
Confidence            6777666655444 47899999999999999999999999  44 77778 8899999998877666655554443

>PRK15075 citrate-proton symporter; Provisional

Probab=99.09  E-value=3.6e-09  Score=100.92  Aligned_cols=138  Identities=14%  Similarity=0.149  Sum_probs=92.1

Q ss_pred             hhhhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hh---cccchhHHHH
Q psy10432         33 IQGPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LT---KFSSDFYILL  106 (440)
Q Consensus        33 ~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~---~~~~~~~~l~  106 (440)
                      ....+.|.+.++ +|.+..+.++........+.+..++.|+++||+|||+.++.+..+..+. . ..   ...+++....
T Consensus       256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (434)
T PRK15075        256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML  335 (434)
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence            345556666654 7998888777665555555555679999999999999887765443322 1 11   1223444444


Q ss_pred             HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccCch
Q psy10432        107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLGPI  176 (440)
Q Consensus       107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~~  176 (440)
                      ...++.|++.+...+....+..      |.+|+++|++..++... +..++..++|.+.+++.++.|+++.
T Consensus       336 ~~~~~~~~~~g~~~~~~~~~~~------e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~  400 (434)
T PRK15075        336 AVELWLSFLYGSYNGAMVVALT------EVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAA  400 (434)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHH------HHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchH
Confidence            4455566666665444444555      99999999999998644 4444577899999999999886433

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.09  E-value=1.2e-09  Score=102.84  Aligned_cols=140  Identities=14%  Similarity=0.119  Sum_probs=107.6

Q ss_pred             CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccc
Q psy10432         46 GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFE  124 (440)
Q Consensus        46 g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~  124 (440)
                      +.+..+.+...++..+...+..+..|++.||+|||+.+.++..+.++. .+...+++.+.+++.++++|++.........
T Consensus       250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  329 (396)
T TIGR00882       250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF  329 (396)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            455667777777777777766679999999999999999988888887 5656788898889999999988766533222


Q ss_pred             hhhhccccccccccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHH
Q psy10432        125 SWYVNEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFI  193 (440)
Q Consensus       125 ~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~  193 (440)
                      .+.      .+..+++.++...+. .+....+|..++|.++|++.+..||  +..|.+.++..++..+..
T Consensus       330 ~~~------~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~--~~~f~~~~~~~~i~~~~~  391 (396)
T TIGR00882       330 KYI------TSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF--QGAYLVLGCIVLLFTLIS  391 (396)
T ss_pred             HHH------HHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence            222      366677777776665 5788999999999999999999898  888887777666555443

>KOG4686|consensus

Probab=99.08  E-value=9.8e-10  Score=92.76  Aligned_cols=148  Identities=21%  Similarity=0.232  Sum_probs=110.4

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh--hhhcccchhHHHHHHHHHHHHHHhhhc
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC--CLTKFSSDFYILLYGRLFGGIATSILF  120 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~~~~~  120 (440)
                      +.+|.|+...+-+.+.-+.++...+|+.|.++||+|++...+.+..+..+.  ....+  +++.=+++..+.|+..+...
T Consensus       293 ~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllA  370 (459)
T KOG4686|consen  293 KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLA  370 (459)
T ss_pred             HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHH
Confidence            789999999998999999999999999999999999999888876665554  33333  23333566777888877664


Q ss_pred             cccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHHHHHHHHHHHhcc
Q psy10432        121 SGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFLLGSTLFIYFCWE  198 (440)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~~  198 (440)
                      .+.-..++      ...|+++.|++.|..++..++|..+-|.++|.+.+.-| +-+.-.|.+......+....+.+.+.
T Consensus       371 cslWP~va------~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N  443 (459)
T KOG4686|consen  371 CSLWPCVA------SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN  443 (459)
T ss_pred             HHHhhhhh------hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence            43333455      88999999999999999999999999999999988754 32355555555544444444444443

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.08  E-value=3.8e-09  Score=102.51  Aligned_cols=139  Identities=10%  Similarity=0.105  Sum_probs=109.5

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| +|+|+.+..+..+..++.+.. ...  ++  ..     ..+..-.+.+++.+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~--~~--~~-----~l~~~~~~~G~~~~  105 (485)
T TIGR00711        37 SQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSLLC-GVA--PN--LE-----LMIIFRVIQGFGGG  105 (485)
T ss_pred             hhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-hCc--CC--HH-----HHHHHHHHHHhhhh
Confidence            678899999999999999999999998 999999988888777766554 211  11  11     34445556666777


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      ...+....++.|..|+++|+++.++......+|..++|.+  + +.+.+ ..++++.|.+.+...++..++...
T Consensus       106 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~--~-~~l~~-~~~w~~~f~~~~~~~~~~~~~~~~  175 (485)
T TIGR00711       106 PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL--G-GWIIE-NYHWRWIFLINVPIGIIVVVVAFF  175 (485)
T ss_pred             hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc--H-hHhcc-CcCceehhhhhhHHHHHHHHHHHH
Confidence            7888899999999999999999999999999999999983  4 66777 788999998877666655554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.07  E-value=3e-09  Score=101.95  Aligned_cols=153  Identities=10%  Similarity=-0.038  Sum_probs=95.0

Q ss_pred             hhhhhHhhhHh-hcCCChhhHHHHHHHHHHHHhhhhcccccccccc--chhHHH-HHHhHHHHHh-hhhc--ccchhHHH
Q psy10432         33 IQGPYVYKVYK-DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF--GRKLIC-ISYGIVYTLC-CLTK--FSSDFYIL  105 (440)
Q Consensus        33 ~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l-~~~~~~~~~~-~~~~--~~~~~~~l  105 (440)
                      ....++|...+ +.|.+..+.+....+......+..++.|+++||+  +||+.. +....+..++ ....  ...+.+..
T Consensus       271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  350 (452)
T PRK11273        271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD  350 (452)
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence            34556766665 4788888887766655555555557999999999  555432 2222333333 2221  23344444


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhcccCchhhHHHHHH
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAI-VSGFTAHFFADILNLGPIAPFAVAIP  184 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw~~~~~~~~~~~  184 (440)
                      .+..++.|.+.....+.......      |.+|+++|+++.|+.+....+|.. .||.+.+.+.++.||  +..|.+...
T Consensus       351 ~~~~~~~g~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~--~~~f~~~~~  422 (452)
T PRK11273        351 MACMIVIGFLIYGPVMLIGLHAL------ELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW--DGGFMVMIG  422 (452)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHH------HHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc--hHHHHHHHH
Confidence            44445555433222111112233      899999999999999988888754 589999999999998  777766665


Q ss_pred             HHHHHHHHH
Q psy10432        185 FLLGSTLFI  193 (440)
Q Consensus       185 ~~~~~~~~~  193 (440)
                      ..++..+..
T Consensus       423 ~~~~~~~~~  431 (452)
T PRK11273        423 GSILAVILL  431 (452)
T ss_pred             HHHHHHHHH
Confidence            555444443

>KOG0637|consensus

Probab=99.05  E-value=1.5e-08  Score=91.68  Aligned_cols=255  Identities=16%  Similarity=0.089  Sum_probs=154.0

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccc----ccchhHHHHHH-hHHHHHh-hhhcccchhH-
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD----KFGRKLICISY-GIVYTLC-CLTKFSSDFY-  103 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~-~~~~~~~~~~-  103 (440)
                      ...-..+.+|..+++|++....+.+...+-+.+.+.+|+.|..+|    |+||||..+.. ....+++ .+..++.++. 
T Consensus        48 wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~  127 (498)
T KOG0637|consen   48 WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGL  127 (498)
T ss_pred             HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhH
Confidence            444566788888999999999989999999999999999999999    68999887664 4445555 4666554432 


Q ss_pred             ----------------HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhH-HHHHHHHHHHHHHHHHHHHHHH
Q psy10432        104 ----------------ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNL-TFARATFGSGLFAIVSGFTAHF  166 (440)
Q Consensus       104 ----------------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~  166 (440)
                                      .++++-.+.-++.......+-+++.      |...++++.+ +++.+.....+|..+|..++. 
T Consensus       128 ~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~------Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~-  200 (498)
T KOG0637|consen  128 LLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLA------DLARGDAKKTRANSVFSFFMAVGNVLGYALGS-  200 (498)
T ss_pred             HhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHH------HhccChhhhhccchhHHHHHHhcceeeeeccc-
Confidence                            3344445555556566554444555      9998888777 999999999999999988886 


Q ss_pred             HHhhcccCchhhHHHHHHHHHHHHHHHHHhcc-------cc----------CCCCCc---cCC-CCccchhhhhhhhcc-
Q psy10432        167 FADILNLGPIAPFAVAIPFLLGSTLFIYFCWE-------EH----------YDPKTA---KSS-LLPNSMFSSLKFLFT-  224 (440)
Q Consensus       167 l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-------e~----------~~~~~~---~~~-~~~~~~~~~~~~~~~-  224 (440)
                         +.+|+-..+|.......+.+..+-..+..       ++          +...+.   +.+ .+.....+.+..+.+ 
T Consensus       201 ---y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~~~~m  277 (498)
T KOG0637|consen  201 ---YLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFGALKVM  277 (498)
T ss_pred             ---ccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCcchHHHHhchHhhC
Confidence               34554445554443333322222211111       11          100000   000 000011112222222 


Q ss_pred             CcchHHHHHHHHHHHhHHHHHHHhhhhh-----hhcc---------------C-CchhhHHHHHHHHHHHHHHHHHHHHh
Q psy10432        225 NPCLLTLGIVQSIYEGIMYTFIFVWTPV-----LEVL---------------S-PPLGLVFSCFMISIMIGSKIYSILIL  283 (440)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---------------~-~~~g~~~~~~~~~~~~~~~~~g~l~~  283 (440)
                      .|..+...+...+.+.+.+.+..+....     |+..               + ..-.+-+.++.+...+.+....++.|
T Consensus       278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~  357 (498)
T KOG0637|consen  278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR  357 (498)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556667777777777666654444333     3111               0 11234455666777778889999999


Q ss_pred             hccCCchhHHHHH
Q psy10432        284 KYFKPETMLTLTV  296 (440)
Q Consensus       284 r~~~~~~~~~~~~  296 (440)
                      | +|.|+++..+.
T Consensus       358 ~-~g~r~~y~~~~  369 (498)
T KOG0637|consen  358 K-FGTRKRYWGGV  369 (498)
T ss_pred             h-cCcceEEeehh
Confidence            7 99666544443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.05  E-value=7.1e-09  Score=98.08  Aligned_cols=129  Identities=9%  Similarity=-0.075  Sum_probs=95.7

Q ss_pred             HhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc-----cchhHHHHHHHH
Q psy10432         38 VYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF-----SSDFYILLYGRL  110 (440)
Q Consensus        38 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~-----~~~~~~l~~~r~  110 (440)
                      .|.+. +++|.++.+.++..........+..++.|+++||+|+|+.+..+..+..++ .+...     .++.+.+++..+
T Consensus       238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  317 (406)
T PRK15402        238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS  317 (406)
T ss_pred             hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence            34443 668899888887554444444444479999999999999988888777666 33322     245666778889


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                      +.|++.+...+.......      . .++++|++..+..+....+|..+|+.+++.+.+..++
T Consensus       318 ~~g~g~~~~~~~~~~~~~------~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~  373 (406)
T PRK15402        318 LYAFGIGLANAGLYRLTL------F-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGN  373 (406)
T ss_pred             HHHHHHHHHhhhHHHHHh------h-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCch
Confidence            999999887665444332      3 3458999999999999999999999999999887776

>TIGR00898 2A0119 cation transport protein

Probab=99.04  E-value=5.1e-09  Score=102.09  Aligned_cols=146  Identities=13%  Similarity=0.087  Sum_probs=99.2

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchh--HHHHHHHHHHHHHHhhh
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDF--YILLYGRLFGGIATSIL  119 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~--~~l~~~r~l~G~~~~~~  119 (440)
                      ++++.+......+..+..+.+.+   +.+++.||+|||+.+..+.++.+++ ++..+.++.  +...+..++.+++.+..
T Consensus       351 ~~~~~~~~~~~~~~~~~~i~~~~---~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (505)
T TIGR00898       351 GNLGGNIYLDLFISGLVELPAKL---ITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSA  427 (505)
T ss_pred             cccCCChHHHHHHHHHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHH
Confidence            45555544443444444444554   8899999999999999988888877 444444433  44455556666666665


Q ss_pred             ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccc
Q psy10432        120 FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEE  199 (440)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e  199 (440)
                      .+....+..      |.+|++.|++++|+.+....+|.+++|.+.+ +.+. ++  ..++.+.+...++..+. ..++||
T Consensus       428 ~~~~~~~~~------e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~~--~~~~~~~~~~~~~~~~~-~~~lpe  496 (505)
T TIGR00898       428 FQMVYLYTA------ELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-WL--FLPLVLFGGLALLAGIL-TLFLPE  496 (505)
T ss_pred             HHHHHHHhc------ccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-HH--hhHHHHHHHHHHHHHHH-HHcCcC
Confidence            554444555      9999999999999999999999999999998 4443 44  45665555555544444 346787


Q ss_pred             cCC
Q psy10432        200 HYD  202 (440)
Q Consensus       200 ~~~  202 (440)
                      +..
T Consensus       497 t~~  499 (505)
T TIGR00898       497 TKG  499 (505)
T ss_pred             CCC
Confidence            654

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.04  E-value=1e-08  Score=96.76  Aligned_cols=141  Identities=11%  Similarity=0.203  Sum_probs=91.2

Q ss_pred             hHhhcCCChhhHHHHHHH-HHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hh---hccc-chhHHHHHHHH----
Q psy10432         41 VYKDYGYDEKNIALLYIA-GFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CL---TKFS-SDFYILLYGRL----  110 (440)
Q Consensus        41 ~~~~~g~s~~~~~~~~~~-~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~---~~~~-~~~~~l~~~r~----  110 (440)
                      +.+++|.++++++++... +.....+..++.|++.||+|||+.+..+..+..+. ..   .++. ++.+.+++.-+    
T Consensus       236 l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  315 (402)
T PRK11902        236 LIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENL  315 (402)
T ss_pred             HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence            336689999999887643 33333444469999999999999887766665544 21   2333 45565555544    


Q ss_pred             HHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      ..|++.+...+...      .++++..|.+++    +..+...++|...++.++|.+.+++||  +..|...+.+.++..
T Consensus       316 ~~g~~~~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~--~~~f~~~~~~~~~~~  383 (402)
T PRK11902        316 CGGMGTAAFVALLM------ALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGW--PGFYLMTVVIALPGL  383 (402)
T ss_pred             HHHHHHHHHHHHHH------HhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHH
Confidence            44454555433333      333366665544    555556677877677789999999999  888877777666554


Q ss_pred             HHH
Q psy10432        191 LFI  193 (440)
Q Consensus       191 ~~~  193 (440)
                      ++.
T Consensus       384 ~~~  386 (402)
T PRK11902        384 ALL  386 (402)
T ss_pred             HHH
Confidence            443

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.03  E-value=1.6e-09  Score=101.32  Aligned_cols=139  Identities=17%  Similarity=0.175  Sum_probs=105.6

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.+++.+...++..++.++.|++.|| +++|+.+..+..+..++.+.. ....   . ..     ..+....+.+++.+
T Consensus        30 ~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~~---~-~~-----~~~~~~~~~g~~~~   98 (379)
T TIGR00881        30 TDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFF-GFST---S-LW-----VMAALWALNGIFQG   98 (379)
T ss_pred             hHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHH-HHhh---h-HH-----HHHHHHHHHHhhcc
Confidence            778999999999999999999999998 999999998888777766555 2211   1 11     34445555666777


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      ...+...+++.|..|+++|+++.++.+....+|..++|.+. + ....+ ..+++..|.+.+++.++..+...
T Consensus        99 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  168 (379)
T TIGR00881        99 MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLV-L-FGIAE-LYSWHWVFIVPGIIAIIVSLICF  168 (379)
T ss_pred             ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHH-H-HHHHh-cCCchhHHHHHHHHHHHHHHHHh
Confidence            78889999999999999999999999999999999999422 2 23334 56778888887766655444443

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.02  E-value=1.6e-08  Score=97.88  Aligned_cols=176  Identities=10%  Similarity=0.083  Sum_probs=116.9

Q ss_pred             hccCcc-hHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHHH
Q psy10432        222 LFTNPC-LLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTLT  295 (440)
Q Consensus       222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~~  295 (440)
                      .+++|+ ++......++...+++......+.++ +..+   .+.+..............++.|++.|| + |+|+.+..+
T Consensus        16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr-~~G~r~~~~~g   94 (500)
T PRK09584         16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDK-VLGTKRVIMLG   94 (500)
T ss_pred             hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHH
Confidence            345664 66666666666666666655444444 3334   344555555444444555789999996 6 999999988


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhHHHH
Q psy10432        296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFITCF  373 (440)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~  373 (440)
                      ..+..++...+ .+..  . ...     ...++..+.+++.|...|...++..+.+|++  ++++++++.++..++|..+
T Consensus        95 ~~~~~ig~~l~-~~~~--~-~~~-----~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~  165 (500)
T PRK09584         95 AIVLAIGYALV-AWSG--H-DAG-----IVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF  165 (500)
T ss_pred             HHHHHHHHHHH-HHhc--c-cHH-----HHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence            88877765444 2211  1 111     2334445566678878888888889888754  3556788889999999999


Q ss_pred             HHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        374 TLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      +|.+.   +.+.+ ..||+..|.+.++..+++.+....
T Consensus       166 gp~i~---g~l~~-~~g~~~~F~i~~i~~~i~~i~~~~  199 (500)
T PRK09584        166 SMLAT---PWLAA-KYGWSVAFALSVVGMLITVVNFAF  199 (500)
T ss_pred             HHHHH---HHHHH-hhCHHHHHHHHHHHHHHHHHHHHH
Confidence            99944   67777 789999999988766665544433

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.01  E-value=1.6e-08  Score=96.35  Aligned_cols=129  Identities=11%  Similarity=0.109  Sum_probs=100.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| +|+|+.+..+.....++.+.. .+..+    ..     ...+.-.+.+++.+
T Consensus        53 ~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~-~~~~~----~~-----~l~~~r~l~G~g~g  121 (426)
T PRK12307         53 MEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAYSVGTGLS-GLASG----VI-----MLTLSRFIVGMGMA  121 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHH-HHHhH----HH-----HHHHHHHHHHHHHh
Confidence            677888999999999999999999998 999999998888887776554 22111    11     23444445566677


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC  401 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (440)
                      ...+....++.|..|+++|+++.++......+|..+++.+.   +...+ ..+++..|.+....
T Consensus       122 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~---~~l~~-~~~w~~~f~i~~~~  181 (426)
T PRK12307        122 GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM---PSFAE-AYGWRAAFFVGLLP  181 (426)
T ss_pred             hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH---HHHcc-cCCHHHHHHHHHHH
Confidence            77888888999999999999999999999999999988743   44555 67889988875433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.00  E-value=1.2e-08  Score=98.14  Aligned_cols=175  Identities=13%  Similarity=0.103  Sum_probs=120.3

Q ss_pred             chHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432        227 CLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS  302 (440)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~  302 (440)
                      .++........-..++|........++ +..+   .+.+.....+.....+..++.|+++||++|+|+.+..+..+..++
T Consensus        15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g   94 (489)
T PRK10207         15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG   94 (489)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence            344455555555566655544444444 3233   556666666666677777899999995489999999999988888


Q ss_pred             HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhHHHHHHHHhhc
Q psy10432        303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFITCFTLIFIKN  380 (440)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~~~  380 (440)
                      .+.+ .+....   . .    ....+..+.+.+.|...|...+++.|.+|++  +|++++++.....++|..++|.+  +
T Consensus        95 ~~~~-~~~~~~---~-~----ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l--~  163 (489)
T PRK10207         95 YFMT-GMSLLK---P-D----LIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL--A  163 (489)
T ss_pred             HHHH-HHhccc---h-h----HHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH--H
Confidence            7666 321110   1 1    1234455566778888898899999999877  45788999999999999999983  4


Q ss_pred             cccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        381 EDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                       +.+.+ ..||+..|.+.++..+++.+.....++
T Consensus       164 -g~l~~-~~gw~~~F~i~~i~~~~~~~~~~~~~~  195 (489)
T PRK10207        164 -PVIAD-KFGYSVTYNLCGAGLIIALLVYFACRG  195 (489)
T ss_pred             -HHHHH-hhChHHHHHHHHHHHHHHHHHHHHcch
Confidence             67777 779999999877655555544444443

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.00  E-value=6.2e-09  Score=97.45  Aligned_cols=138  Identities=10%  Similarity=0.137  Sum_probs=106.0

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| ++||+.+..+.....++.... ....  +  ..     .......+.+++.+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~-~~~~--~--~~-----~~~~~~~l~g~~~~   94 (377)
T PRK11102         26 GSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVAC-ALAQ--T--ID-----QLIYMRFLHGLAAA   94 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHH-HHHc--c--HH-----HHHHHHHHHHHHHH
Confidence            678889999999999999999999997 999999888887777766555 2211  1  11     23444445566677


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      ...+...+++.+..|+++|+++.++.+....++..++|.+.   +...+ ..+++..|.+.+...++..+...
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~~~~~~~~~~~~~~~~~~~~~~  163 (377)
T PRK11102         95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIG---GWLLV-WFSWHAIFWVLALAAILAAALVF  163 (377)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HcChHHHHHHHHHHHHHHHHHHH
Confidence            77788888999999999999999999999999999999843   55656 67888888887776666554443

>KOG1330|consensus

Probab=99.00  E-value=1.2e-09  Score=98.97  Aligned_cols=146  Identities=14%  Similarity=0.219  Sum_probs=116.7

Q ss_pred             ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHH
Q psy10432        255 VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEI  334 (440)
Q Consensus       255 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (440)
                      ......|++.....+..++++++.|.+.|| ++|++++.++..+-.++.+.. .+.   ...|      ...+.=.+.++
T Consensus        65 i~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~iW~~Av~~~-~fs---~~Fw------q~~l~R~~vGi  133 (493)
T KOG1330|consen   65 ISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIFIWTLAVFAS-GFS---NHFW------QVLLCRGFVGI  133 (493)
T ss_pred             CCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHHHHHHHHHHH-HHH---HHHH------HHHHHHHHhcc
Confidence            334788999999999999999999999998 999999999988887776555 211   1112      34555556666


Q ss_pred             hhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        335 SVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       335 ~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +...+.|..+++++|.+|+++|++++++.++....|..+|-.  .+ ..+.+....|++.|...+++.++..++...+.+
T Consensus       134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~v--vg-s~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~  210 (493)
T KOG1330|consen  134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYV--VG-SVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR  210 (493)
T ss_pred             chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEE--ee-eeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence            777799999999999999999999999999999999988877  45 566663344899999999988888777766655

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.00  E-value=5.7e-09  Score=99.80  Aligned_cols=120  Identities=17%  Similarity=0.215  Sum_probs=93.6

Q ss_pred             ChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-chhHHHHHHHHHHHHHHhhhccccch
Q psy10432         48 DEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-SDFYILLYGRLFGGIATSILFSGFES  125 (440)
Q Consensus        48 s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~  125 (440)
                      ++.+.+....+..+...+..+++|+++||+|||+.+..+..+..++ +...+. ++.+.+++..++.|++.+...+...+
T Consensus       255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  334 (437)
T TIGR00792       255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA  334 (437)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4455566555555666666689999999999999999998887777 443333 46677777888899998888776666


Q ss_pred             hhhcccccccccc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        126 WYVNEHLNYYLFP-------VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       126 ~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                      .+.      |..|       ++++|...|+.+....+|..+++.+.+.+.+..|+
T Consensus       335 ~~~------~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~  383 (437)
T TIGR00792       335 LVA------DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY  383 (437)
T ss_pred             HHh------hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            665      6654       45679999999999999999999999999998777

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG3626|consensus

Probab=99.00  E-value=1.3e-08  Score=98.59  Aligned_cols=258  Identities=13%  Similarity=0.113  Sum_probs=174.0

Q ss_pred             HhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--------------
Q psy10432         38 VYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--------------   99 (440)
Q Consensus        38 ~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--------------   99 (440)
                      +..+-+.++++.++.|+   .+-++.....+   +..+..-|..|-|.+-.|.++++++ +++++-              
T Consensus       120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~---fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~  196 (735)
T KOG3626|consen  120 ITTIERRFKISSSQSGLIASSYDIGNLLLII---FVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI  196 (735)
T ss_pred             hhhhhhhcCCCCCcceeEeeecccchhhhhH---hHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence            33444789999999887   45556666555   8888899999988888888888887 544321              


Q ss_pred             ------c-----------------------------h--hH-HHHHHHHHHHHHHhhhccccchhhhccccccccccchh
Q psy10432        100 ------S-----------------------------D--FY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEW  141 (440)
Q Consensus       100 ------~-----------------------------~--~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (440)
                            +                             +  ++ .++++.++.|+|....+|...+++=      |...+++
T Consensus       197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD------Dnvk~~~  270 (735)
T KOG3626|consen  197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID------DNVKKKN  270 (735)
T ss_pred             hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc------ccccccC
Confidence                  0                             0  22 5678899999999999886666665      9999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------cc--CchhhHHHHHHHHHHHHHHHHHhccccCCCC
Q psy10432        142 LNLTFARATFGSGLFAIVSGFTAHFFADIL---------------NL--GPIAPFAVAIPFLLGSTLFIYFCWEEHYDPK  204 (440)
Q Consensus       142 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------gw--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  204 (440)
                      -+..+|+......+|.++|-++|+++.+.+               .|  .|..-|++.+.+.++..+..+++ |...++.
T Consensus       271 SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f-Pk~lp~~  349 (735)
T KOG3626|consen  271 SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF-PKELPKS  349 (735)
T ss_pred             CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC-cccCccc
Confidence            999999999999999999999999986543               12  11344555565666555554444 5433321


Q ss_pred             Cc------------c------CCC---CccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---Cc
Q psy10432        205 TA------------K------SSL---LPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PP  259 (440)
Q Consensus       205 ~~------------~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~  259 (440)
                      ++            +      +..   +.+++....+++++||.+....+...+-...+..+.++.+.++ ++++   ..
T Consensus       350 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~  429 (735)
T KOG3626|consen  350 QKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASL  429 (735)
T ss_pred             cccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH
Confidence            10            0      000   1124455678899999999988888887777777777566666 5566   34


Q ss_pred             hhhHHHHHHH-HHHHHHHHHHHHHhh-ccCCchhHHHHHHHHHHHHHH
Q psy10432        260 LGLVFSCFMI-SIMIGSKIYSILILK-YFKPETMLTLTVYLATFSITV  305 (440)
Q Consensus       260 ~g~~~~~~~~-~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~  305 (440)
                      +..+.....+ +..+|.+++|++.+| +.+.|....+..+...+..+.
T Consensus       430 An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~  477 (735)
T KOG3626|consen  430 ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF  477 (735)
T ss_pred             HHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence            4444433333 455677889999987 345555565555555554444

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.00  E-value=8.1e-09  Score=94.65  Aligned_cols=149  Identities=11%  Similarity=0.149  Sum_probs=118.5

Q ss_pred             CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccc
Q psy10432         46 GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFE  124 (440)
Q Consensus        46 g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~  124 (440)
                      +.+....|.+.+++...-.+.-.+..++.+|+|.|+.++++..+.++= .+++++++.+.+.+.+.+.|+-.+..     
T Consensus       255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~-----  329 (412)
T PF01306_consen  255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLL-----  329 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHH-----
T ss_pred             ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHH-----
Confidence            344556777777777777766678999999999999999998888886 78999999999999999999999998     


Q ss_pred             hhhhccccccccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432        125 SWYVNEHLNYYLFPVEWLNLTFARA-TFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYD  202 (440)
Q Consensus       125 ~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  202 (440)
                       .+....++++.+|+|-.++...+. +...++|..+.+.++|.+.|+.|.  +..|++.+.+.+...++..+.++++++
T Consensus       330 -lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~--~~tylimg~iv~~~~li~~f~l~~~~~  405 (412)
T PF01306_consen  330 -LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGF--QHTYLIMGLIVLPFTLISAFTLKKDKK  405 (412)
T ss_dssp             -HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred             -HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCc--HHHHHHHHHHHHHHHHHheeeecCCCc
Confidence             555666666999998888888885 788999999999999999999998  777777777777667777777766544

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.00  E-value=3.1e-08  Score=95.44  Aligned_cols=144  Identities=10%  Similarity=0.001  Sum_probs=93.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.+...+...++..++.++.|++.|| +|+|+.+..+.+...++.+.. .+..  +  ..     ..+....+.+++.+
T Consensus        71 ~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~~~~~~-~~~~--s--~~-----~l~~~r~l~G~~~~  139 (476)
T PLN00028         71 SDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAPAVFCM-SLVS--S--AT-----GFIAVRFFIGFSLA  139 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHH-HHhc--C--HH-----HHHHHHHHHHHHHH
Confidence            567777788888999999999999998 999998887776666655433 2211  1  11     12222233344444


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc-ccc----cCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNE-DAE----GGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ...+ ....+.+.+|+++||++.|+.+...++|..+++.+.... ...    .+...+|+..|.+.+++.++..+....+
T Consensus       140 ~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~  218 (476)
T PLN00028        140 TFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL  218 (476)
T ss_pred             hhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            3333 445678889999999999999888778777766533110 101    1113589999999888776665555444


Q ss_pred             h
Q psy10432        413 K  413 (440)
Q Consensus       413 ~  413 (440)
                      .
T Consensus       219 ~  219 (476)
T PLN00028        219 G  219 (476)
T ss_pred             c
Confidence            3

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.00  E-value=1.2e-08  Score=91.60  Aligned_cols=150  Identities=14%  Similarity=0.189  Sum_probs=110.2

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-------chhHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-------SDFYI  104 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-------~~~~~  104 (440)
                      +...+|.++ ++||.++.+.|.....+..++.+..|.+|+++||+|.+|++.......+++ .+....       ++...
T Consensus       237 fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~  316 (417)
T COG2223         237 FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVV  316 (417)
T ss_pred             HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHH
Confidence            555665555 789999999999999999999999999999999999999988877777776 433222       33333


Q ss_pred             ----HHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432        105 ----LLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA  180 (440)
Q Consensus       105 ----l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~  180 (440)
                          ++...+..|+|.|..+    .++.      .++| ++-+.+.|+.....++|...-|..-+...+..| .+...|+
T Consensus       317 ~~~~~l~l~~~~G~GnGsvf----k~Ip------~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg-~~~~~f~  384 (417)
T COG2223         317 FVAVFLALFVFAGLGNGSVF----KMIP------VIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG-SYTGAFM  384 (417)
T ss_pred             HHHHHHHHHHHhccCcchhe----eech------HHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc-cHHHHHH
Confidence                3445555666655543    3444      6664 488999999999999999888988888888877 3366776


Q ss_pred             HHHHHHHHHHHHHHH
Q psy10432        181 VAIPFLLGSTLFIYF  195 (440)
Q Consensus       181 ~~~~~~~~~~~~~~~  195 (440)
                      +.....+++.+..+.
T Consensus       385 ~~~~~~~~a~v~~~~  399 (417)
T COG2223         385 LLLAFYLVALVLTWA  399 (417)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            666666655554443

>PRK11043 putative transporter; Provisional

Probab=98.99  E-value=2.5e-08  Score=94.21  Aligned_cols=142  Identities=11%  Similarity=0.080  Sum_probs=103.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| +++|+.+..+.....++.+.. .+.  ++  ..     .......+.+++.+
T Consensus        41 ~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~--~~--~~-----~l~~~~~l~G~~~~  109 (401)
T PRK11043         41 SAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGM-LWV--ES--AA-----QLLVLRFVQAVGVC  109 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHH-HHh--cC--HH-----HHHHHHHHHHhhhH
Confidence            778899999999999999999999998 999999888877666655444 211  11  11     23333334444455


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ...+.....+.|..|++++++..+..+....++..++|.+  + +...+ ..+++..|.+.++..++..+.....++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~-~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~  182 (401)
T PRK11043        110 SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLL--G-AWLLN-HFGWQAIFATLFAITLLLILPTLRLKP  182 (401)
T ss_pred             HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHh-cCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5566667788888899999999999888888999999984  3 56666 778899998887776666555444433

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=98.98  E-value=2.5e-08  Score=95.07  Aligned_cols=150  Identities=16%  Similarity=0.149  Sum_probs=89.1

Q ss_pred             hhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hh---cccchhHHHHH
Q psy10432         34 QGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LT---KFSSDFYILLY  107 (440)
Q Consensus        34 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~---~~~~~~~~l~~  107 (440)
                      ...++|... +++|.+..+.+....+......+.+++.|+++||+|||+.+..+..+..+. . ..   ...++....+.
T Consensus       262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (432)
T PRK10406        262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG  341 (432)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence            445666655 568888888888777777777777778999999999999877765544333 2 11   11223332222


Q ss_pred             HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccCchhhHHHHHHHH
Q psy10432        108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGL-FAIVSGFTAHFFADILNLGPIAPFAVAIPFL  186 (440)
Q Consensus       108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~  186 (440)
                      .-.+.+...+...+...++..      |.+|++.|+.+.|+.+...++ .....|.+.+.+ +..|+ +...++..+...
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~------e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~-~~~~~~~~~~~~  413 (432)
T PRK10406        342 LVMCALLIVSFYTSISGILKA------EMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGM-ETAFFWYVTLMA  413 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------HHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCC-CcHHHHHHHHHH
Confidence            222222233333232333445      999999999999998766554 344577777755 44453 134444444444


Q ss_pred             HHHHH
Q psy10432        187 LGSTL  191 (440)
Q Consensus       187 ~~~~~  191 (440)
                      ++..+
T Consensus       414 ~i~~~  418 (432)
T PRK10406        414 VVAFL  418 (432)
T ss_pred             HHHHH
Confidence            43333

>TIGR00896 CynX cyanate transporter

Probab=98.96  E-value=1.2e-08  Score=94.69  Aligned_cols=133  Identities=11%  Similarity=0.000  Sum_probs=98.4

Q ss_pred             hhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhcccchhHHHHHHHH
Q psy10432         33 IQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFSSDFYILLYGRL  110 (440)
Q Consensus        33 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~  110 (440)
                      ....++|...++.|.+..+.+...++......+..++.|++.||+ +||+.+..+..+.+++ +...+.++..... .-+
T Consensus       215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  293 (355)
T TIGR00896       215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL  293 (355)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence            344567677788899998988877776666666678999999999 5666777777777776 4444444333222 456


Q ss_pred             HHHHHHhhhccccchhhhccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLF-PVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN  172 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g  172 (440)
                      +.|++.+...|...+.+.      +.. ++++++...++.+....++..++|.+.|.+.++.|
T Consensus       294 l~g~~~g~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       294 VLGLGQGGAFPLALTLIG------LRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG  350 (355)
T ss_pred             HHHHhhhhHhHHHHHHHH------HhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            789999888776555544      444 45677889999999999999999999999999875

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=98.96  E-value=2.7e-08  Score=93.70  Aligned_cols=135  Identities=7%  Similarity=0.050  Sum_probs=99.0

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|+++|| ++||+.+..+.....++.+.. ...  ++  ..     ..++...+.+++.+
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~-~~~--~~--~~-----~l~~~~~~~g~~~~  111 (394)
T PRK11652         43 GAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIFILGTLVA-LFA--HS--LT-----VLIAASAIQGLGTG  111 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHH-HHH--cc--HH-----HHHHHHHHHHhhhh
Confidence            778889999999999999999999998 999999888877776665444 211  11  11     23344444455555


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+.......+..+++++++..+..+....++..++|.+.   +...+ ..+++..|.+.++..++..+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~---~~l~~-~~g~~~~f~~~~~~~~~~~~  177 (394)
T PRK11652        112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIG---GLLTT-LFGWRACYLFLLLLGAGVTF  177 (394)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccChHHHHHHHHHHHHHHHH
Confidence            56666677778888889999999999998888888998843   55556 67889888887765554433

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.96  E-value=7.7e-09  Score=81.68  Aligned_cols=132  Identities=11%  Similarity=0.155  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHH
Q psy10432        265 SCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTG  344 (440)
Q Consensus       265 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  344 (440)
                      ....++.+++.+..+++.|| +++|+.+..+.....++.+.. ...   ...+      .......+.+++.+...+...
T Consensus         5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~g~~~~~~~~~~~   73 (141)
T TIGR00880         5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMF-ALS---SNIT------VLIIARFLQGFGAAFALVAGA   73 (141)
T ss_pred             EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHH-HHh---ccHH------HHHHHHHHHHHHHHHHHHhHH
Confidence            44567888999999999997 999998887777666665444 211   1111      234444556666777788888


Q ss_pred             hHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        345 YLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       345 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      ....|..|+++|++..+..+....++..++|.+.   +...+ ..+++..+.+.+...+++.+....
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  136 (141)
T TIGR00880        74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLG---GVLAQ-FLGWRAPFLFLAILALAAFILLAF  136 (141)
T ss_pred             HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhH---HHHhc-ccchHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999844   55666 677888888877766666555443

>KOG3762|consensus

Probab=98.94  E-value=5.9e-08  Score=89.61  Aligned_cols=181  Identities=13%  Similarity=0.046  Sum_probs=121.0

Q ss_pred             hhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh-hhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH
Q psy10432        218 SLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP-VLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT  293 (440)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~  293 (440)
                      ...+++.+++...+.+...+...+.....+ +.. .++..+   ...|........+.++.-++.+++.+| +|+.+++.
T Consensus       363 ~~~~~~~s~~~llff~~av~mG~g~~lv~t-FLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~  440 (618)
T KOG3762|consen  363 DVGKVFASPHILLFFFVAVVMGAGVGLVFT-FLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMY  440 (618)
T ss_pred             HHHHHhcCCCEEehhHHHHHHHHHHHHHHH-HHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceee
Confidence            333566677766644444333333322222 221 113333   556777777778889999999999997 99999998


Q ss_pred             HHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhh-hhHHH
Q psy10432        294 LTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPT-NFITC  372 (440)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~  372 (440)
                      .++.+..+=++.+ .+   ...+|      ..+..=.+-++..+..+....++++...|++.+.++.++.+... .+|-.
T Consensus       441 lgLa~~~~Rf~~~-S~---L~n~W------~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g  510 (618)
T KOG3762|consen  441 LGLACNVGRFLYY-SY---LQNPW------MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKG  510 (618)
T ss_pred             ehhhHHHHHHHHH-HH---hcCch------heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcc
Confidence            8887776655444 22   12223      22333345555688888899999999999999999999888644 56777


Q ss_pred             HHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        373 FTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +|.+  ++ |...+ .++-+..|.++++.+++..+....+++
T Consensus       511 ~Gsl--IG-G~~v~-~fg~~ttf~~~giAcl~~l~~~~~iq~  548 (618)
T KOG3762|consen  511 LGSL--IG-GFVVE-RFGARTTFRIFGIACLVTLALFISIQL  548 (618)
T ss_pred             hhhh--hh-hhhhe-eehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence            7777  55 66767 788899999988887777666655544

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.94  E-value=3.2e-08  Score=92.29  Aligned_cols=164  Identities=15%  Similarity=0.224  Sum_probs=117.8

Q ss_pred             HHhhhhhHhhhHhhcC-CChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-chhHHHH-
Q psy10432         31 DWIQGPYVYKVYKDYG-YDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-SDFYILL-  106 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~~~~~l~-  106 (440)
                      ......+.+...+|.| .+.+..+.+.+++...-.++-...+++..|+|.|+++.++.+..++= .+.+.. ++.+... 
T Consensus       223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~  302 (400)
T PF03825_consen  223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVA  302 (400)
T ss_pred             HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            4445566655558888 67777777777777665555568999999999999999999988885 555555 5544433 


Q ss_pred             ---HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccC----chhh
Q psy10432        107 ---YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATF-GSGLFAIVSGFTAHFFADILNLG----PIAP  178 (440)
Q Consensus       107 ---~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~----~~~~  178 (440)
                         ....++|+..+....+...++.      +..|++.|+++.++++. ..++|..+|..++|++.|++|-+    +...
T Consensus       303 ~~~l~q~lhG~tf~~~~~a~~~yi~------~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~  376 (400)
T PF03825_consen  303 LQLLGQLLHGLTFGLFHAASVRYID------RIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV  376 (400)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHH------HhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence               3356799999999665555555      99999999999999866 57899999999999999987641    1334


Q ss_pred             HHHHHHHHHHHHHHHHHhcccc
Q psy10432        179 FAVAIPFLLGSTLFIYFCWEEH  200 (440)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~e~  200 (440)
                      +.+.+.+.++..++.++..||+
T Consensus       377 ~~v~a~~~~~~~~~f~~~fk~~  398 (400)
T PF03825_consen  377 FLVFAVMALVILVLFVILFKPK  398 (400)
T ss_pred             HHHHHHHHHHHHHHHHhhccCC
Confidence            4455555444455555555554

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=98.93  E-value=2.9e-08  Score=92.04  Aligned_cols=138  Identities=10%  Similarity=0.012  Sum_probs=93.8

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      ..+.|+..+...++..++++..|++.|| ++||+.+.........+. .. .. ..+  .+.     ..+..-.+.+++.
T Consensus        25 ~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~-~~-~~-~~~--~~~-----~l~~~R~l~G~g~   93 (368)
T TIGR00903        25 KEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAA-GR-LL-DPF--NYE-----WLLACQLLAALGQ   93 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHH-HH-HH-Hhc--cHH-----HHHHHHHHHHhHh
Confidence            3778899999999999999999999998 998776554433332222 11 11 101  111     2333333444555


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      +. .+.......|..|+++|+++.++.+....+|..+++.+  + ..+.+ ..+|+..|.+.+++.++..++.+
T Consensus        94 ~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~--~-~~l~~-~~gWr~~f~~~~~l~~~~~~~~~  162 (368)
T TIGR00903        94 PF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAA--G-LKIYT-AGGLQLLIIPIAAVAAAGIILVL  162 (368)
T ss_pred             HH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHH-ccchHHHHHHHHHHHHHHHHHHH
Confidence            54 33444455788899999999999999999999999873  3 55656 78999999997776655544433

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=98.93  E-value=4.3e-08  Score=92.76  Aligned_cols=137  Identities=10%  Similarity=0.039  Sum_probs=100.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      ...+...+.+.++..++.+..|+++|| +|||+.+..+.....++.+.. ...  ++  ..     ..+..-.+.+++.+
T Consensus        51 ~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~-~~a--~~--~~-----~l~~~r~l~Gi~~~  119 (413)
T PRK15403         51 SLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAAT-LFT--TS--MT-----QFLIARFIQGTSIC  119 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHH-HHc--CC--HH-----HHHHHHHHHHHHHH
Confidence            566778888889999999999999998 999999888877776665444 221  11  11     23333333444444


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS  409 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (440)
                      ...+.......|..|++++++.++..+....++..++|.  .+ +.+.+ ..+|+..|.+.++..+++.+..
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--lg-~~l~~-~~gw~~~f~~~~~~~~i~~~~~  187 (413)
T PRK15403        120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPL--SG-AALMH-FVHWKVLFAIIAVMGLIAFVGL  187 (413)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHHHH-hcCHHHHHHHHHHHHHHHHHHH
Confidence            445556677888889999999999999999999999988  34 55556 6789999999887766665543

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.92  E-value=6.8e-08  Score=91.12  Aligned_cols=113  Identities=15%  Similarity=0.139  Sum_probs=89.7

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.|+..+...++..++++..|++.|| +|+|+.+..+..+.+++.+.. ....... .+.     ..+....+.+++.|
T Consensus        38 ~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~-~~~~~~~-~~~-----~~l~~~~l~G~g~g  109 (410)
T TIGR00885        38 FQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLF-WPAAEIM-NYT-----LFLVGLFILTAGLG  109 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHH-HHHHhhc-cHH-----HHHHHHHHHHhhHH
Confidence            678999999999999999999999998 999999999998888876554 2111111 121     34455556677788


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ...+..+.++.+..|++++++..++.+...++|..++|.+.
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~  150 (410)
T TIGR00885       110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVA  150 (410)
T ss_pred             HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888888888999999999999999999999998743

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.92  E-value=1.6e-08  Score=108.65  Aligned_cols=144  Identities=13%  Similarity=0.111  Sum_probs=109.5

Q ss_pred             hhhHhhhH-hhcCCChh-hHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHH
Q psy10432         35 GPYVYKVY-KDYGYDEK-NIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLF  111 (440)
Q Consensus        35 ~~~~~~~~-~~~g~s~~-~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l  111 (440)
                      ...++... +++|.+.. +.++++....+...+.+++.|+++||+++|+.+.++.++.+++ .+..+..+.+.+++..++
T Consensus       252 ~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (1146)
T PRK08633        252 QANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL  331 (1146)
T ss_pred             HHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            33444444 66888888 8887666666555555679999999999999888888877777 566667788888888999


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPF  185 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~  185 (440)
                      .|++.+...+...+++.      +..|+++|+++++..+....+|.++++.+++.+.. .++.+...+.+.+.+
T Consensus       332 ~g~~~~~~~~~~~~~~~------~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~  398 (1146)
T PRK08633        332 FGFSAGLFIVPLNALIQ------FRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALV  398 (1146)
T ss_pred             HHHHHHHhhHHHHHHHh------hcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHH
Confidence            99999988776666666      99999999999999999999999888888877654 344334445444433

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=98.91  E-value=1.4e-07  Score=88.61  Aligned_cols=148  Identities=11%  Similarity=0.019  Sum_probs=95.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhh-hccccchhhcchhHHHHHHHHHHHhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLT-SSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      .+.+++.+...++..+.++..|++.|| +|.|+....+..+..+..+.. .+. ......+.     ..++.-.+.+++ 
T Consensus        70 ~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~i~~~~~-~~a~~~~~~s~~-----~lli~r~l~Gig-  141 (462)
T PRK15034         70 DQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILIIPCVWL-GIAVQNPNTPFG-----IFIVIALLCGFA-  141 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHH-HHHHcccCCCHH-----HHHHHHHHHHHH-
Confidence            778888898999999999999999998 999999888888877666544 221 11111121     233333344444 


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH----Hhh-----ccccc-----cCccchhhHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI----FIK-----NEDAE-----GGKLIAIHSVFVVCTACL  402 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~----~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~  402 (440)
                      |..++.....+++.+|+++||++.|+....+++|..+++.    +..     ..+..     .+...+++.+..+.....
T Consensus       142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~  221 (462)
T PRK15034        142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL  221 (462)
T ss_pred             HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence            5577788888999999999999999997666676654443    221     00110     011334666666666666


Q ss_pred             HHHHHHHHHhh
Q psy10432        403 LVALLASCVFK  413 (440)
Q Consensus       403 ~~~~~~~~~~~  413 (440)
                      ++..++.++..
T Consensus       222 iv~~i~~~~~~  232 (462)
T PRK15034        222 AIATIAAWSGM  232 (462)
T ss_pred             HHHHHHHHHhC
Confidence            55555555443

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=98.91  E-value=3.2e-08  Score=96.25  Aligned_cols=128  Identities=16%  Similarity=0.015  Sum_probs=79.3

Q ss_pred             ccccccccccchhHHHHHHhHHHHHh-hhhcccc----hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhh
Q psy10432         68 IVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWL  142 (440)
Q Consensus        68 ~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  142 (440)
                      ++.++++||+|||+.++.+..+.+++ .+.++..    +...+...-+...++.....+....+..      |.+|.+.|
T Consensus       353 ~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------E~~p~~~R  426 (502)
T TIGR00887       353 WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPG------EVFPTRYR  426 (502)
T ss_pred             HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhh------ccCchhHH
Confidence            48899999999999988887776665 3332211    1111111111111111112222223334      99999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432        143 NLTFARATFGSGLFAIVSGFTAHFFADILN--------LGPIAPFAVAIPFLLGSTLFIYFCWEEHYD  202 (440)
Q Consensus       143 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  202 (440)
                      +++.++.+....+|.+++|.+.+.+.+..+        +.....+.+.++..++..+ ..+++||++.
T Consensus       427 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i-~~~~lpEt~~  493 (502)
T TIGR00887       427 STAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL-FTLLIPETKG  493 (502)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH-HheEeccCCC
Confidence            999999999999999999999999887421        1113455555555444444 3456788754

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.91  E-value=1.1e-08  Score=92.09  Aligned_cols=150  Identities=16%  Similarity=0.138  Sum_probs=114.1

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhcc
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFS  121 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~  121 (440)
                      +++|++..++...-........+++.+.|++.||+|.|+++..+.++..+. +...+......+.+.-.+.|...|..+.
T Consensus       281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA  360 (438)
T COG2270         281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA  360 (438)
T ss_pred             HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence            589999999987666666666666679999999999999999999988887 3333444455566677889999999877


Q ss_pred             ccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432        122 GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH  200 (440)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~  200 (440)
                      .+-++..      +.+|++|-++.+|+++.....+..+||.+-+.+.+..|- .|.-+.....+..+ .+.....+|++
T Consensus       361 ~SRSy~~------~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~-~r~g~~~i~vll~i-Gl~~L~~v~~~  431 (438)
T COG2270         361 SSRSYLA------RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS-SRAGVLSIIVLLLI-GLLLLLRVKVP  431 (438)
T ss_pred             HHHHHHH------HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHh-hHhhEEeecCC
Confidence            5555555      999999999999999999999999999999999988663 35554444444443 33334455554

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=98.90  E-value=6.6e-08  Score=90.09  Aligned_cols=137  Identities=15%  Similarity=0.090  Sum_probs=90.2

Q ss_pred             hHHHHHHHHHHHhHHHHHHHhhhh-hh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q psy10432        228 LLTLGIVQSIYEGIMYTFIFVWTP-VL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS  302 (440)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~  302 (440)
                      ++...+.....+...+.+.. +.| .+ +..+   .+.++..+...++..++.++.|++.|| +|+|+.+..+.....++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~   80 (366)
T TIGR00886         3 LFFSWFGFFLSFSVWFAFSP-LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIP   80 (366)
T ss_pred             hHHHHHHHHHHHHHHHHhHH-hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHH
Confidence            34444444444444433323 444 24 3333   678899999999999999999999998 99999998888887777


Q ss_pred             HHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        303 ITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      .+.. .+...  . ..     ...+...+.+++.+. .+....++.+..|+++|+++.++.....++|..+++.
T Consensus        81 ~~~~-~~~~~--~-~~-----~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~  144 (366)
T TIGR00886        81 CLWA-GLAVQ--S-YS-----VLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF  144 (366)
T ss_pred             HHHH-HHHhh--h-HH-----HHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH
Confidence            6555 22110  1 11     233333334444333 3456678889999999999999988777777766665

>KOG3574|consensus

Probab=98.88  E-value=3.1e-07  Score=81.15  Aligned_cols=329  Identities=10%  Similarity=-0.012  Sum_probs=167.1

Q ss_pred             hHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccc-----ccchhHHH------HHHhHHHHHh-hh---h---cc
Q psy10432         37 YVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIAD-----KFGRKLIC------ISYGIVYTLC-CL---T---KF   98 (440)
Q Consensus        37 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~D-----r~Grr~~l------~~~~~~~~~~-~~---~---~~   98 (440)
                      .+|-+.+.-|.|.++.+..-.+.+-.+.  -..|.++.|     |+||||..      ++|.++..++ ..   .   +-
T Consensus        52 ~iP~lL~ak~vSyt~~a~fS~ay~P~sL--KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~  129 (510)
T KOG3574|consen   52 AIPLLLQAKGVSYTSQAIFSFAYWPFSL--KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG  129 (510)
T ss_pred             hhHHHhcCCCcchhhhhhhhhhhhHHHH--HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence            6666667788888887653222222211  148999999     99999974      3444444444 21   1   12


Q ss_pred             cchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hc
Q psy10432         99 SSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-------IL  171 (440)
Q Consensus        99 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~  171 (440)
                      .++...+...-++.-+..+...-+.+.|..      ...++|+.|.+......+.+.|..+|..+--.+..       ..
T Consensus       130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwAL------tmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~r  203 (510)
T KOG3574|consen  130 LPNVVALTLLFLLLNFLAATQDIAVDGWAL------TMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLR  203 (510)
T ss_pred             CcchHHHHHHHHHHHHHHhhhhhhhhHHHH------HhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHh
Confidence            234444444556666777777777777877      88889999998888888888887777654332221       11


Q ss_pred             ccCc-------hhhHHHHHHHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHH
Q psy10432        172 NLGP-------IAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYT  244 (440)
Q Consensus       172 gw~~-------~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (440)
                      +|+-       .......+.+.++...+..+.-+|++.+..++.+....+..+-++.+++-|.+..........-.++.+
T Consensus       204 s~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a  283 (510)
T KOG3574|consen  204 SIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQA  283 (510)
T ss_pred             cCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhh
Confidence            2210       011122222333333444444344443323332223333344556677777777665555444444433


Q ss_pred             HHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH----HHHHHHHHHHHHHHHHhhhcc---
Q psy10432        245 FIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML----TLTVYLATFSITVSTVLTSSL---  313 (440)
Q Consensus       245 ~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---  313 (440)
                      --. ..+.- -+.|   +..++......-..++.....|++..+ ..+-.+.    ..=........ .+.+.....   
T Consensus       284 ~da-~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~-~~pl~~~lka~~~R~~~~~~~t-~Lv~~~~~~~~~  360 (510)
T KOG3574|consen  284 ADA-LTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAG-PRPLNVFLKAVPYRLGGGLVQT-ALVWWTPTLGHS  360 (510)
T ss_pred             hhh-ccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCC-CCcchHHHHhhhHHHHHHHHHH-HHHhhhcccccC
Confidence            322 22222 2222   444444333334445555555555442 1111111    11111111111 221221111   


Q ss_pred             ccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        314 FDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ....+....-..+....+.+...-..+....+.-++..|+...|+.+.+.|+..++|+-.-..
T Consensus       361 ~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~t  423 (510)
T KOG3574|consen  361 DGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGT  423 (510)
T ss_pred             CCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHH
Confidence            111111000011112223333333345566677788889999999999999999998755443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=98.87  E-value=2e-08  Score=96.85  Aligned_cols=146  Identities=16%  Similarity=0.043  Sum_probs=109.8

Q ss_pred             hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432        254 EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE  333 (440)
Q Consensus       254 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (440)
                      +..+.+.|.+.+...++..++.+..|++.|| +++|+.+..+.++..++.+.. .......  ..     ..++.-.+.+
T Consensus        72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~-~~~~~~~--~~-----~l~~~r~~~G  142 (465)
T TIGR00894        72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVI-PWAAGGG--IA-----LVVFCRVIQG  142 (465)
T ss_pred             CCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHH-HHHHHcC--ch-----HHHHHHHHHH
Confidence            3444778899999999999999999999998 999999888887766665443 1111111  11     2333444566


Q ss_pred             HhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc-chhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        334 ISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL-IAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ++.+...|....++.+..|+++|+++.|+.+....+|..+++.+.   +.+.+ . .+++..|.+.++..++..++.+..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~---~~l~~-~~~gw~~~f~i~~~~~~~~~~~~~~~  218 (465)
T TIGR00894       143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPIS---GWLCE-SWGGWPMIFYVFGIVGCAWSLLWFVF  218 (465)
T ss_pred             HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHh-ccCCCCeehhhhhHHHHHHHHHHHHH
Confidence            678888899999999999999999999999999999999999854   55555 5 488999998887766655544443

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=98.86  E-value=7.9e-07  Score=81.28  Aligned_cols=297  Identities=13%  Similarity=0.063  Sum_probs=164.9

Q ss_pred             HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccc
Q psy10432         55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLN  133 (440)
Q Consensus        55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~  133 (440)
                      .-.+..+..-+   .+-+..+|+..+.=......+..++ ++.+++++.+.=+++-++.+++.|.......++.      
T Consensus        67 adi~P~l~~Kl---~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt------  137 (402)
T PF02487_consen   67 ADILPSLLVKL---IAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT------  137 (402)
T ss_pred             HHHHHHHHHHH---HhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH------
Confidence            33344444444   6677888887544455566677777 6788889999888899999888888765544443      


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCC----cc--
Q psy10432        134 YYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKT----AK--  207 (440)
Q Consensus       134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~--  207 (440)
                       ..+++    ...+-++++.+.+.++|+..-..+.+ .|+..|..++....+.++..+..++.+|+++.+++    +.  
T Consensus       138 -~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~  211 (402)
T PF02487_consen  138 -HFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED  211 (402)
T ss_pred             -HhcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC
Confidence             34443    46788888899999999988777777 78877877777665554444333444543321110    00  


Q ss_pred             ---CC--CCc-------cchhhhhhh-hccCcchHHHHHHHHHHHhHHHHHHHhhhhhh--hcc----CCchhhHHHHHH
Q psy10432        208 ---SS--LLP-------NSMFSSLKF-LFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVL----SPPLGLVFSCFM  268 (440)
Q Consensus       208 ---~~--~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~g~~~~~~~  268 (440)
                         ++  ..+       ...+..+++ ..+-|.++..++-.++.+..-|.......|.+  ...    .....+....+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ  291 (402)
T PF02487_consen  212 EAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQ  291 (402)
T ss_pred             cccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHH
Confidence               00  000       000111111 11112233344444455555554444444443  111    144455556666


Q ss_pred             HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhc
Q psy10432        269 ISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRG  348 (440)
Q Consensus       269 ~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  348 (440)
                      +|..+++--...     ++-|++... .++..+-.+.+..-...    ...|..+..+..+...+..-|..+......+.
T Consensus       292 ~GVFISRSS~~~-----~rir~lwil-s~LQ~~nl~~~~l~s~~----~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~  361 (402)
T PF02487_consen  292 LGVFISRSSLPF-----FRIRRLWIL-SLLQVINLVFLLLQSWY----RFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS  361 (402)
T ss_pred             HHHhhhhcceee-----eehhhHHHH-HHHHHHHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            666555433221     222333222 22222222222111100    11122223444445556667777777777778


Q ss_pred             cCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        349 RIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       349 ~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      +..|+++|--.+|........|..++..
T Consensus       362 ~~~~~~~REFslg~vsvsds~GI~lAgl  389 (402)
T PF02487_consen  362 EEVPPEDREFSLGAVSVSDSLGILLAGL  389 (402)
T ss_pred             hcCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            8889999999999999998888888776

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG0569|consensus

Probab=98.84  E-value=1.4e-07  Score=88.43  Aligned_cols=164  Identities=15%  Similarity=0.143  Sum_probs=114.6

Q ss_pred             HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chh--H-
Q psy10432         32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDF--Y-  103 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~--~-  103 (440)
                      +....+...+.++-|.+..+..++......+..+...++..+.||+|||+.++.+..+..+. ++....    ...  | 
T Consensus       287 ~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~  366 (485)
T KOG0569|consen  287 NAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL  366 (485)
T ss_pred             ceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence            33445555777899999888877766666666666679999999999999999998888876 432221    112  1 


Q ss_pred             --HHHHHHHHHHHHHhhh-ccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHH
Q psy10432        104 --ILLYGRLFGGIATSIL-FSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA  180 (440)
Q Consensus       104 --~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~  180 (440)
                        ..+++.++..++.+.. .|..  +    -+.+|.+|++.|+.+.+.......+...+-...-..+.+..|-   +.|+
T Consensus       367 ~y~~i~~~~~~~~~f~~G~gpi~--~----fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---~~fi  437 (485)
T KOG0569|consen  367 SYLCIAAIFLFIISFAIGPGPIP--W----FIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---YVFI  437 (485)
T ss_pred             HHHHHHHHHHHHHhhhcCCCchh--H----HHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---hhhH
Confidence              1234444444443333 1222  2    2244999999999999999999888887777777777777663   5666


Q ss_pred             HHHHHHHHHHHHHHHhccccCCCC
Q psy10432        181 VAIPFLLGSTLFIYFCWEEHYDPK  204 (440)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~e~~~~~  204 (440)
                      ...+...+..+..++.+||++.+.
T Consensus       438 lF~i~~~~~~i~~~~~lPETkgr~  461 (485)
T KOG0569|consen  438 LFVIPLAIFLIYLYRYLPETKGRT  461 (485)
T ss_pred             HHHHHHHHHHHHHHHhCcccCCCC
Confidence            666677777888899999997543

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.83  E-value=7.2e-08  Score=82.69  Aligned_cols=132  Identities=19%  Similarity=0.181  Sum_probs=98.5

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc-------cchh
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF-------SSDF  102 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~-------~~~~  102 (440)
                      ...++.+-|++.+.+|.|.+|...+-..+..... ++++.|.+.||+|+|.++.+|.+...++ .+...       ..++
T Consensus        18 ~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~-~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~   96 (250)
T PF06813_consen   18 TYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSY-FGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPV   96 (250)
T ss_pred             ccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccch
Confidence            3445667777779999999999887666666554 4678999999999999999999998888 43222       2467


Q ss_pred             HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432        103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI  170 (440)
Q Consensus       103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  170 (440)
                      |.+.+..++.|.+.+...+++...-.      +.+| ++||++.|+.-...+++..+-..+...+.+.
T Consensus        97 ~~~~~~~~l~~~s~~~~~ta~lvt~~------~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   97 WLMCLFLFLGGNSSCWFNTASLVTCV------RNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             HHHHHHHHHHcccHHHhhhHHHHHHH------HhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            88888888888887776555444444      7786 5899999999999999876655555444443

>TIGR01272 gluP glucose/galactose transporter

Probab=98.80  E-value=2e-07  Score=84.34  Aligned_cols=140  Identities=12%  Similarity=0.098  Sum_probs=98.0

Q ss_pred             hhhhhHhhhHh---hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHH
Q psy10432         33 IQGPYVYKVYK---DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYG  108 (440)
Q Consensus        33 ~~~~~~~~~~~---~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~  108 (440)
                      ......+...+   .+|.++++.+..++.......+.....+++.||+|+||.+..+..+..++ .+....++... ...
T Consensus       158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~  236 (310)
T TIGR01272       158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWF  236 (310)
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHH
Confidence            34444444443   36889888887655555555555569999999999999988877777666 34434443332 335


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI  183 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~  183 (440)
                      -++.|++.+..+|...+...      +..|+ +.+++.++. ....+|..++|++.|.+.|..|.  +..+++..
T Consensus       237 ~~l~g~~~s~i~P~~~s~a~------~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~--~~a~~v~~  301 (310)
T TIGR01272       237 VLALGLFNSIMFPTIFSLAL------NALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI--QLAFALPV  301 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------hhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc--hHHHHHHH
Confidence            56889999999998777777      76654 345566665 56778999999999999998887  66666433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>TIGR00901 2A0125 AmpG-related permease

Probab=98.80  E-value=3.9e-08  Score=91.27  Aligned_cols=115  Identities=15%  Similarity=0.160  Sum_probs=86.9

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHH-HHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc-c----------c
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGF-ASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF-S----------S  100 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~-~----------~  100 (440)
                      .....+...+++|.++++.+.+..+.. ....+..+++|++.||+|||+.+..+.++.+++ .+..+ .          +
T Consensus       228 ~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (356)
T TIGR00901       228 ATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFP  307 (356)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Confidence            444555555779999999987665433 333333469999999999999988888777776 33222 1          4


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHH
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSG  154 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~  154 (440)
                      +.+.+....++.+++.+...+...+++.      |.+|+++|++.+++.++..+
T Consensus       308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       308 HLLMLFLTITLEAVTGGLGTVAFVAFLS------KLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             hHHHHHHHHHHHHHHhHHHHHHHHHHHH------HhcCCCccHHHHHHHHHHHh
Confidence            5677788889999999999887777777      99999999999999887654

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.79  E-value=9.3e-08  Score=102.60  Aligned_cols=181  Identities=11%  Similarity=0.014  Sum_probs=115.4

Q ss_pred             hhccCcchHHHHHHHHHHHhHHHHHHHhhhh----hhhccC-----CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q psy10432        221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP----VLEVLS-----PPLGLVFSCFMISIMIGSKIYSILILKYFKPETM  291 (440)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~  291 (440)
                      .++++++++.+....++.....+........    .+....     ...++..+...+..++.+++.|+++|| +++|++
T Consensus         6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~   84 (1140)
T PRK06814          6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKL   84 (1140)
T ss_pred             hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHH
Confidence            4566777777666665555443322111111    121111     345677778888899999999999998 999987


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH
Q psy10432        292 LTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT  371 (440)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~  371 (440)
                      +........+........... .. ..     ..++...+.+++.++..|...+++.+.+|++++++++|+.++..++|.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~-~s-~~-----~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~  157 (1140)
T PRK06814         85 AKILKFAEIGIAALAIYGFHL-NS-VP-----LLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI  157 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hh-HH-----HHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence            644322222222111111111 11 11     345555566777888899999999999999999999999999999999


Q ss_pred             HHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        372 CFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      .+||.+  + +.+.+ ..+++..|....+..+++.++....+
T Consensus       158 ~igp~l--~-g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (1140)
T PRK06814        158 LLGTII--G-GLATI-SGNFVILVALLMGIAVLGWLASLFIP  195 (1140)
T ss_pred             HHHHHH--H-HHHHh-ccccHHHHHHHHHHHHHHHHHHhhCC
Confidence            999994  4 66767 67888887554444444444444443

>TIGR00788 fbt folate/biopterin transporter

Probab=98.78  E-value=4.4e-08  Score=93.92  Aligned_cols=151  Identities=15%  Similarity=0.065  Sum_probs=115.6

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-c---------cchhHHHHHHHHH
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-F---------SSDFYILLYGRLF  111 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-~---------~~~~~~l~~~r~l  111 (440)
                      +++|.++.++|..+..+.+...+.....+++.+|++.|+++.++.++.+++ .... .         .++.+..+...++
T Consensus       281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l  360 (468)
T TIGR00788       281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII  360 (468)
T ss_pred             ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence            578999999999877777777766689999999999999999999988886 3321 1         1344455666788


Q ss_pred             HHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cCchhhHHHHHHHH
Q psy10432        112 GGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-----LGPIAPFAVAIPFL  186 (440)
Q Consensus       112 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----w~~~~~~~~~~~~~  186 (440)
                      .+++.+........++.      +..|+++++...++.++..++|..+++.+++.+.+++|     ++..+..+......
T Consensus       361 ~~~~~g~~~~~~~~~~~------~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~  434 (468)
T TIGR00788       361 AEVLAQLKFMPFLVLLA------RLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLA  434 (468)
T ss_pred             HHHHHHHHHccHHHHHH------HhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHH
Confidence            99998888666666666      99999999999999999999999999999999999887     54454444444333


Q ss_pred             HHHHHHHHHhccc
Q psy10432        187 LGSTLFIYFCWEE  199 (440)
Q Consensus       187 ~~~~~~~~~~~~e  199 (440)
                      -+..+.....+|+
T Consensus       435 ~l~~l~~~~llP~  447 (468)
T TIGR00788       435 PLLPLPLLHLLPR  447 (468)
T ss_pred             HHHHHHHHHhCCC
Confidence            3333333447786

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG3764|consensus

Probab=98.75  E-value=4.3e-08  Score=87.22  Aligned_cols=142  Identities=12%  Similarity=0.097  Sum_probs=115.4

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.|++++...+.+++.+++.|.+.|| +|.+..+.+++..+..+.+++ .+...    ++     ..++.=.+-+.+..
T Consensus       106 ~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilF-afg~s----y~-----~l~vAR~LQgvgsA  174 (464)
T KOG3764|consen  106 TQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILF-AFGNS----YP-----MLFVARSLQGVGSA  174 (464)
T ss_pred             cchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHH-HHcch----hH-----HHHHHHHHhhhhHH
Confidence            789999999999999999999999997 999999999999988887666 32111    11     23333334445566


Q ss_pred             chhhhHHhHhccCCcch-hhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        338 MYCPVTGYLRGRIIPEK-ARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~-~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      .......+++.+.+|+| +|++++|+.-....+|..++|.  .+ |.+.+ ..|++..|.++++++++...+.+..-+
T Consensus       175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPp--fG-GilYe-~~Gk~aPFlVL~~v~Lld~~L~l~vi~  248 (464)
T KOG3764|consen  175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPP--FG-GILYE-FAGKSAPFLVLAIVLLLDGALQLLVIE  248 (464)
T ss_pred             HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCC--cc-cchHh-hcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence            66777788888888877 5799999999999999999999  57 88888 899999999999999988887776654

>KOG2504|consensus

Probab=98.75  E-value=9.6e-08  Score=91.50  Aligned_cols=153  Identities=20%  Similarity=0.142  Sum_probs=123.1

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccc--hhHHHHHHhHHHHHh-hhhcccchhHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFG--RKLICISYGIVYTLC-CLTKFSSDFYILLY  107 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~-~~~~~~~~~~~l~~  107 (440)
                      ......++++..++.|.+..+.+.+.++-.....+..+..|+++|+..  ++.+..++.+..+++ ..+.+.++++.++.
T Consensus       314 ~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~  393 (509)
T KOG2504|consen  314 FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIV  393 (509)
T ss_pred             HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence            333444566666899999999988888888888888899999999988  444556677777777 68899999999999


Q ss_pred             HHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHHHH
Q psy10432        108 GRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIPFL  186 (440)
Q Consensus       108 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~~~  186 (440)
                      .-.+.|++.|.......-.+.      |..+.++...+.|+.....+++.++||+++|.+.+..| |  ...|+......
T Consensus       394 ~~~~fG~~~g~~~~l~~~i~~------~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y--~~~f~~~g~~~  465 (509)
T KOG2504|consen  394 FSILFGFCVGSFSSLTPVILV------DLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY--DHAFYFCGLCF  465 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------HHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe--eeehhhcChHH
Confidence            999999999998554333444      99999999999999999999999999999999988876 6  66666666655


Q ss_pred             HHHHH
Q psy10432        187 LGSTL  191 (440)
Q Consensus       187 ~~~~~  191 (440)
                      ++...
T Consensus       466 ~~s~~  470 (509)
T KOG2504|consen  466 LLSAV  470 (509)
T ss_pred             HHHHH
Confidence            54443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.74  E-value=1.3e-07  Score=93.82  Aligned_cols=153  Identities=15%  Similarity=0.141  Sum_probs=106.8

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc---c-------------------
Q psy10432        257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL---F-------------------  314 (440)
Q Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------  314 (440)
                      ..+.|++.+.+.++..++.++.+++.|| .+|++.+.++.++.+++.++. .+....   .                   
T Consensus        67 s~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~lg~ll~-alphf~~~~y~~~~~~~~~~~~~~~~~~~  144 (633)
T TIGR00805        67 TSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMGLGSFLL-SLPHFLSGRYSYSTTVSSTGNLSSANSFL  144 (633)
T ss_pred             CCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHHHHHHHH-hChHHhcCCcccccccccccccccccccc
Confidence            3788999999999999999999999997 999999999988888887665 332100   0                   


Q ss_pred             ---c-----------------chhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHH
Q psy10432        315 ---D-----------------SRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFT  374 (440)
Q Consensus       315 ---~-----------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~  374 (440)
                         .                 ..........+++-.+.+++.+...+...+++.|.+|+++|+...|+.+....+|..++
T Consensus       145 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG  224 (633)
T TIGR00805       145 CMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFG  224 (633)
T ss_pred             ccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHH
Confidence               0                 00000011233444566666777888899999999999999999999999999999988


Q ss_pred             HHHhhccccccCc--------------------cc-hhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        375 LIFIKNEDAEGGK--------------------LI-AIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       375 ~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +.+.   +.+.+.                    +. .|+..|++.+++.++..+..+.+++
T Consensus       225 ~llg---g~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~  282 (633)
T TIGR00805       225 YLLG---SFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK  282 (633)
T ss_pred             HHHH---HHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            8732   222210                    11 2566777777766665554444443

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.74  E-value=3.6e-07  Score=86.59  Aligned_cols=170  Identities=11%  Similarity=0.084  Sum_probs=108.6

Q ss_pred             hHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhh---ccCCchhHHHH-HHHHHHHHHHHHHhhhc
Q psy10432        240 GIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILK---YFKPETMLTLT-VYLATFSITVSTVLTSS  312 (440)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  312 (440)
                      .+........+|+++..+   ...+.++....+..++..++.|+++||   |+|||+..... .....++...+ .+...
T Consensus        18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll-~~~~~   96 (477)
T TIGR01301        18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI-GFAAD   96 (477)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH-HhCch
Confidence            333333344555554444   777888888899999999999999994   49999987765 44444443333 22111


Q ss_pred             cc---------cchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhh--HHHHHHhhhhhhhHHHHHHHHhhcc
Q psy10432        313 LF---------DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKAR--ATITNWLRVPTNFITCFTLIFIKNE  381 (440)
Q Consensus       313 ~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g~~~~~~~~~~~  381 (440)
                      ..         ..... .....+.++.+..++.+...+...+++.|.+|+++|  +.+.++.+...++|+.+++.+  + 
T Consensus        97 ~~~~~~~~~~~~~~~~-~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~--g-  172 (477)
T TIGR01301        97 IGHLFGDNLDKKTKPR-AIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA--G-  172 (477)
T ss_pred             hhhhccccccccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH--H-
Confidence            00         00000 001234444455567777778889999999998865  678999999999999999872  2 


Q ss_pred             ccc--cC------------ccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        382 DAE--GG------------KLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       382 ~~~--~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +..  .+            ...+++..|.+.+++.+++.++....-+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~  219 (477)
T TIGR01301       173 AYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK  219 (477)
T ss_pred             HHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence            211  00            0126788999988888887776655433

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK09848 glucuronide transporter; Provisional

Probab=98.73  E-value=7.2e-08  Score=92.43  Aligned_cols=125  Identities=10%  Similarity=0.060  Sum_probs=92.0

Q ss_pred             hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc--chhHHHHHHHHHHHHHHhhh
Q psy10432         43 KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SDFYILLYGRLFGGIATSIL  119 (440)
Q Consensus        43 ~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~~~~l~~~r~l~G~~~~~~  119 (440)
                      +.+|.++...++..........+..++++++.||+|+|+.+..+.++..++ ....+.  ++++.+++..++.|+|.+..
T Consensus       257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~  336 (448)
T PRK09848        257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT  336 (448)
T ss_pred             eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence            346655444333333223334445579999999999999999998888777 443343  35677777788999999998


Q ss_pred             ccccchhhhccccccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        120 FSGFESWYVNEHLNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                      .+...+...      |..|++       ++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus       337 ~~~~~al~~------~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~  391 (448)
T PRK09848        337 MTVMWALEA------DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY  391 (448)
T ss_pred             HHHHHHHHH------HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            776666666      776654       358889999999999999999999998877766

>PRK10133 L-fucose transporter; Provisional

Probab=98.71  E-value=6.2e-07  Score=85.44  Aligned_cols=112  Identities=16%  Similarity=0.197  Sum_probs=87.2

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.+..|++.|| +|+|+.+..+..+..++.+.. ......+ .+.     ..+....+.+++.|
T Consensus        61 ~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~l~-~~~~~a~-~~~-----~ll~~r~l~G~g~g  132 (438)
T PRK10133         61 FQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYALGAALF-WPAAEIM-NYT-----LFLVGLFIIAAGLG  132 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHHHhcC-CHH-----HHHHHHHHHHHHHH
Confidence            788999999999999999999999998 999999999998888877554 2111111 121     34555566777788


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIF  377 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~  377 (440)
                      ...+..+.++.+..|+++++..++..+....+|..+++.+
T Consensus       133 ~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~  172 (438)
T PRK10133        133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF  172 (438)
T ss_pred             HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888888887666666678899999999999998873

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.70  E-value=4.1e-07  Score=87.66  Aligned_cols=175  Identities=11%  Similarity=0.128  Sum_probs=110.4

Q ss_pred             hccCcchHHHHHHHHHHHhHHHHHHH----hhhhhhhccC--CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q psy10432        222 LFTNPCLLTLGIVQSIYEGIMYTFIF----VWTPVLEVLS--PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLT  295 (440)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~  295 (440)
                      ..++++++.......+.....+....    ..+.+....|  ....++.....++..++.++.|+++|. +|||..+..+
T Consensus        36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g  114 (599)
T PF06609_consen   36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIG  114 (599)
T ss_pred             ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHH
Confidence            34566666654444443333322221    1222223333  667788888889999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432        296 VYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~  375 (440)
                      .++..++.+.. .         ...+....+.+..+.+++.|... .....++|..|.+.|....++.....-.....++
T Consensus       115 ~~l~vvG~Iv~-a---------tA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~  183 (599)
T PF06609_consen  115 SLLGVVGSIVC-A---------TAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISP  183 (599)
T ss_pred             HHHHHhHHHHh-h---------cCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccH
Confidence            99988888666 2         11111135556666666665544 3455678999999998877766554444444455


Q ss_pred             HHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy10432        376 IFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVF  412 (440)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (440)
                      ..  + ..... ..+|++.|++..+...++.+.....
T Consensus       184 ~i--a-~~~~~-~~~WRw~~~~~~i~~~i~~vl~~~f  216 (599)
T PF06609_consen  184 LI--A-QLFAA-HSGWRWIFYIFIIWSGIALVLIFFF  216 (599)
T ss_pred             HH--H-HHhcc-CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            52  2 22333 5588999999888776666554443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>KOG3810|consensus

Probab=98.70  E-value=8.5e-07  Score=77.49  Aligned_cols=352  Identities=11%  Similarity=0.072  Sum_probs=214.3

Q ss_pred             hhcCCChhhHHH----HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHh
Q psy10432         43 KDYGYDEKNIAL----LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATS  117 (440)
Q Consensus        43 ~~~g~s~~~~~~----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~  117 (440)
                      .+.+++..++.-    +..-.+++..+   +.=.+.|-.-.|++++.-.+..... .+.-+.++.+.+=+.-+..|...+
T Consensus        34 p~~NlT~~~l~~evyPvwTYSYLv~Lv---pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA  110 (433)
T KOG3810|consen   34 PDKNLTEDQLTNEVYPVWTYSYLVGLV---PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA  110 (433)
T ss_pred             CCCCccHHHHhcccccchhHHHHHHHH---HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH
Confidence            455667666652    33444555554   4556789888888887755555555 677788889888888888888877


Q ss_pred             hhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhc
Q psy10432        118 ILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCW  197 (440)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~  197 (440)
                      .. -      +..+++-..++++++.++.+.-.+..-.|...|..++..+.+.-.+.+...=.+......+... ...++
T Consensus       111 aE-I------AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~-~A~fL  182 (433)
T KOG3810|consen  111 AE-I------AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVL-LALFL  182 (433)
T ss_pred             HH-H------hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHH-HHhhC
Confidence            75 3      3444445999999999999999999999999999999998876444334333444433333333 33455


Q ss_pred             cccCCC------CCcc--------C-CCCc--------cchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhh
Q psy10432        198 EEHYDP------KTAK--------S-SLLP--------NSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLE  254 (440)
Q Consensus       198 ~e~~~~------~~~~--------~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (440)
                      |..+++      +++.        . +.+.        ....+.++...+||+++...+-..+...+.+-..++.+...+
T Consensus       183 P~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~  262 (433)
T KOG3810|consen  183 PRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWK  262 (433)
T ss_pred             CCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHH
Confidence            654421      0000        0 0000        011234455678899888777777777777666554443332


Q ss_pred             cc-C----CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHH
Q psy10432        255 VL-S----PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAF  329 (440)
Q Consensus       255 ~~-~----~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (440)
                      .- +    ...|..-+...+.++++.+..|.+.-+ +.|..-+.++......+.+++  +.......|      ....++
T Consensus       263 ~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~-w~r~g~~ll~~~s~~~agllf--~m~~t~~Iw------~~Ya~y  333 (433)
T KOG3810|consen  263 EVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNIN-WNRWGDLLLAVGSAVQAGLLF--IMAQTQHIW------VCYAGY  333 (433)
T ss_pred             hhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeec-cchhhHHHHHHHHHHhhhhhh--hhhccccee------hhhhhH
Confidence            22 1    345666677777788888888988654 444433333333222222222  222222222      467777


Q ss_pred             HHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhc-cccccCc---cchhhHHHHHHHHHHHHH
Q psy10432        330 LIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKN-EDAEGGK---LIAIHSVFVVCTACLLVA  405 (440)
Q Consensus       330 ~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~  405 (440)
                      .++.....+..+....-+.+....|.-|..+|+..++.-+-..+-..++.. .|.-.+.   ..-|..-|.+.+++.++.
T Consensus       334 vlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~  413 (433)
T KOG3810|consen  334 VLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIG  413 (433)
T ss_pred             HHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHH
Confidence            777777888777777777777788999999998888766665555543211 0111110   122455677777777776


Q ss_pred             HHHHHHhhh
Q psy10432        406 LLASCVFKR  414 (440)
Q Consensus       406 ~~~~~~~~~  414 (440)
                      ..+.....+
T Consensus       414 ~~~~~~~~~  422 (433)
T KOG3810|consen  414 FGIEYLMCR  422 (433)
T ss_pred             HHHHHHHhh
Confidence            655444433

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.68  E-value=3.6e-07  Score=87.07  Aligned_cols=145  Identities=15%  Similarity=0.206  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHhhhhhHhhhHh-hcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-
Q psy10432         23 PFFLATFSDWIQGPYVYKVYK-DYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-   99 (440)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-   99 (440)
                      ..+....+..+.....+...+ .+|.+ ...+....+..+.+.+..|++++++||+|+|+.+..+..+.+++ ++..+. 
T Consensus       233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~  311 (428)
T PF13347_consen  233 AFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG  311 (428)
T ss_pred             HHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence            333333444344444423333 34434 45556666666666666789999999999999999999999988 555555 


Q ss_pred             -chhHHHHHHHHHHHHHHhhhccccchhhhccccccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10432        100 -SDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADIL  171 (440)
Q Consensus       100 -~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~  171 (440)
                       +|.+.+++.-++.|++.+.......+.+.      |..+.+       +.|..++..+....++..+++.+.+.+.+..
T Consensus       312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~a------d~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~  385 (428)
T PF13347_consen  312 PGSPWLVLILFILAGIGYGAFFVIPWAMLA------DVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV  385 (428)
T ss_pred             hhhHHHHHHHHHHhHhhhcccccccccccc------cchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence             48999999999999999999776666665      877643       3578889999999999999999999988877


Q ss_pred             ccC
Q psy10432        172 NLG  174 (440)
Q Consensus       172 gw~  174 (440)
                      |+.
T Consensus       386 Gy~  388 (428)
T PF13347_consen  386 GYD  388 (428)
T ss_pred             CcC
Confidence            663

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.66  E-value=9.9e-06  Score=80.08  Aligned_cols=145  Identities=14%  Similarity=0.143  Sum_probs=110.7

Q ss_pred             hHhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccc--------hhHHHHHHHH
Q psy10432         41 VYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSS--------DFYILLYGRL  110 (440)
Q Consensus        41 ~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~--------~~~~l~~~r~  110 (440)
                      +.+.+|.+.+....++........+...++|.++|+ +||++.+..+.++..++ .+.++..        .....+++-.
T Consensus        14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa   93 (654)
T TIGR00926        14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA   93 (654)
T ss_pred             HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH
Confidence            346688888887777777777777777899999995 79999999999988888 5444321        1233567788


Q ss_pred             HHHHHHhhhccccchhhhccccccccccch---hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCchhhHH
Q psy10432        111 FGGIATSILFSGFESWYVNEHLNYYLFPVE---WLNLTFARATFGSGLFAIVSGFTAHFFADIL-------NLGPIAPFA  180 (440)
Q Consensus       111 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~~~~~  180 (440)
                      +..+|.|..-|+..+...      |.++++   +|.+.+.++..+.++|+++++.+..++.+..       +|  ...|.
T Consensus        94 Lia~G~GgiKp~vsaf~g------dqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~--~~aF~  165 (654)
T TIGR00926        94 LIALGTGGIKPCVSAFGG------DQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY--PLAFG  165 (654)
T ss_pred             HHHhhccccccCchhhhH------hhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch--HHHHH
Confidence            888999999998888888      777654   4677889999999999999999999887543       46  77777


Q ss_pred             HHHHHHHHHHHHH
Q psy10432        181 VAIPFLLGSTLFI  193 (440)
Q Consensus       181 ~~~~~~~~~~~~~  193 (440)
                      +..+..++..+..
T Consensus       166 i~~i~m~ia~lvf  178 (654)
T TIGR00926       166 VPAILMILALIVF  178 (654)
T ss_pred             HHHHHHHHHHHHH
Confidence            7776666555443

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.66  E-value=5.2e-07  Score=79.70  Aligned_cols=171  Identities=12%  Similarity=0.079  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHH--HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHH
Q psy10432         13 FKRLQVRYFIPFFLATFS--DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIV   89 (440)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~   89 (440)
                      .|+.+..|.+..+...-+  .......+|+++.|.|+|+.+.|++.++..+.+...+...-.+++|. ++|+..+....+
T Consensus       204 vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~  283 (395)
T COG2807         204 VWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL  283 (395)
T ss_pred             cccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence            344444555544433332  44456678899999999999999877777777777777888888865 466666667777


Q ss_pred             HHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhcccccccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         90 YTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP-VEWLNLTFARATFGSGLFAIVSGFTAHFF  167 (440)
Q Consensus        90 ~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l  167 (440)
                      +.++ +.+.+.+.-..++- -++.|+|.|..+|.....+.      +..+ +++-++..++.+....+=...||.+.|++
T Consensus       284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~------~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l  356 (395)
T COG2807         284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLIL------LRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL  356 (395)
T ss_pred             HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHH------hhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence            7777 55545554333332 49999999999887777776      5443 44556667777777777788999999999


Q ss_pred             Hhhc-ccCchhhHHHHHHHHHHHHHH
Q psy10432        168 ADIL-NLGPIAPFAVAIPFLLGSTLF  192 (440)
Q Consensus       168 ~~~~-gw~~~~~~~~~~~~~~~~~~~  192 (440)
                      .|.. +|  +..........+...+.
T Consensus       357 hDa~gsw--~~~~~~l~~~~i~m~i~  380 (395)
T COG2807         357 HDATGSW--SAPLVLLALATLLMLIF  380 (395)
T ss_pred             HHhcCCh--HHHHHHHHHHHHHHHHH
Confidence            9986 46  65555544444433333

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.64  E-value=2.6e-06  Score=79.22  Aligned_cols=143  Identities=8%  Similarity=0.040  Sum_probs=106.1

Q ss_pred             Cc-hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        258 PP-LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       258 ~~-~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      .+ .|.++..+..+..+..+..|++.|| +|.|+.+..+.+...+..+++.. ...    . .    ...+.=.+++++.
T Consensus        61 ~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~f-a~S----l-~----~L~i~R~llGvaE  129 (511)
T TIGR00806        61 ETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLL-GTS----V-W----HMQLMEVFYSVTM  129 (511)
T ss_pred             HHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHH-HHH----H-H----HHHHHHHHHHHHH
Confidence            66 8999999999999999999999998 99999999888887777665522 110    1 1    2333344556666


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      |... ....++.+.+|+++|+++.|..+....+|..+++.+... -...+ +..+.....+......++.++.+++++
T Consensus       130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y~~Ln~Isl~s~~~a~~~a~~LP~  204 (511)
T TIGR00806       130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISYSTLNIISLVFMTFSVFLALFLKR  204 (511)
T ss_pred             HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            7667 888889999999999999999999999999999985422 11123 445556666666666777777777664

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.63  E-value=1.4e-06  Score=78.83  Aligned_cols=150  Identities=19%  Similarity=0.200  Sum_probs=107.4

Q ss_pred             HHHHhhhhhHhhhHhhcCCCh--hhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccc--hhH
Q psy10432         29 FSDWIQGPYVYKVYKDYGYDE--KNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSS--DFY  103 (440)
Q Consensus        29 ~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~--~~~  103 (440)
                      .......+..+...++++.+.  .+.++..........+..++.|.++||+|||+.+..+.....++ ....+..  +.+
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (338)
T COG0477          16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA   95 (338)
T ss_pred             HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence            333344555655666766555  35666555555555555579999999999998888877654444 4444444  488


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccc-hhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhh--cccCchhhH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV-EWLNLTFARATF-GSGLFAIVSGFTAHFFADI--LNLGPIAPF  179 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~gw~~~~~~  179 (440)
                      .+++.|+.+|++.+...+...+++.      |..|+ ++|+...+.... ...+|..++|.+++.+...  .+|  +..+
T Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  167 (338)
T COG0477          96 LLLILRLLQGLGGGGLLPVASALLS------EWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGW--RAAF  167 (338)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHH------HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHH
Confidence            9999999999999988787777777      99887 789999999888 6888999999888777665  456  6655


Q ss_pred             HHHHHHH
Q psy10432        180 AVAIPFL  186 (440)
Q Consensus       180 ~~~~~~~  186 (440)
                      .......
T Consensus       168 ~~~~~~~  174 (338)
T COG0477         168 LLAALLG  174 (338)
T ss_pred             HHHHHHH
Confidence            4444433

>PRK09669 putative symporter YagG; Provisional

Probab=98.60  E-value=7.1e-07  Score=85.50  Aligned_cols=114  Identities=11%  Similarity=0.158  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h-hhcc-cchhHHHHHHHHHHHHHHhhhccccchhhhcc
Q psy10432         54 LLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C-LTKF-SSDFYILLYGRLFGGIATSILFSGFESWYVNE  130 (440)
Q Consensus        54 ~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~  130 (440)
                      .....+.+...+..+++++++||+|+|+.+..+..+..+. . +... .++.+.+++..++.|++.+...+...+++.  
T Consensus       268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a--  345 (444)
T PRK09669        268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS--  345 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            3444444444444478999999999999998887766653 3 2222 457777888889999999998777666666  


Q ss_pred             ccccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        131 HLNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       131 ~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                          |..+.+       +.|..++..+....+|..+|+.+++.+.+..|+
T Consensus       346 ----d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy  391 (444)
T PRK09669        346 ----DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY  391 (444)
T ss_pred             ----hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence                777532       235577888999999999999999999988877

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.58  E-value=9e-07  Score=81.75  Aligned_cols=181  Identities=14%  Similarity=0.127  Sum_probs=127.9

Q ss_pred             hccCcc-hHHHHHHHHHHHhHHHHHHHhhhhhh----h----ccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhH
Q psy10432        222 LFTNPC-LLTLGIVQSIYEGIMYTFIFVWTPVL----E----VLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETML  292 (440)
Q Consensus       222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~  292 (440)
                      .+++|+ ++.+...-+.=-+++|..-.....++    +    .++.++.-.+..++.-.-+...++||++||.+|+|+.+
T Consensus        16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI   95 (498)
T COG3104          16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI   95 (498)
T ss_pred             cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence            344444 34444444444455554433222222    1    22244444555555555567889999999978999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch--hhHHHHHHhhhhhhhH
Q psy10432        293 TLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK--ARATITNWLRVPTNFI  370 (440)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g  370 (440)
                      ..+.++.+++.+.+ ......   ...    ...+++.+...+.|..=|...+++.|..|++  +|-..+++..+..|+|
T Consensus        96 ~lGail~~iGh~~L-~~~~~~---~~~----gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiG  167 (498)
T COG3104          96 VLGAILMAIGHLVL-AISSVS---GPG----GLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIG  167 (498)
T ss_pred             HHHHHHHHHHHHHH-hccccc---ccc----HHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehH
Confidence            99999999998777 332100   011    3566666666789999999999998888765  5677789999999999


Q ss_pred             HHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        371 TCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +.++|.+.   +...+ ..++...|..+++.+..+.+.++..++
T Consensus       168 sl~~p~i~---~~~~~-~~g~~~gF~~aavGm~~gl~~f~~~~r  207 (498)
T COG3104         168 SLIAPIIT---GLLAI-NYGWHVGFGLAAVGMIIGLVIFLLGRR  207 (498)
T ss_pred             HHHHHHHH---HHHHH-hhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence            99999955   77777 889999999999999999888887776

>KOG2532|consensus

Probab=98.54  E-value=1.2e-06  Score=83.02  Aligned_cols=145  Identities=19%  Similarity=0.248  Sum_probs=113.7

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+-+++++....|.+++.+..|++.|| +|.|+++..+.++.++..++.-.......  +      ..++.=.+-+++.|
T Consensus        73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~~~~--~------~~~~~R~lqGl~~g  143 (466)
T KOG2532|consen   73 TEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAASIGF--Y------LLLVLRFLQGLGQG  143 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHhcc--h------hhHHHHHHhHHHHh
Confidence            678999999999999999999999998 99999999999888887766522211111  1      12333334556688


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      ..+|....+..+..|+++|++..++.....++|..++-.  .+ |.+-+...||+..|++.+++.++..++...+.+
T Consensus       144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp--~s-g~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~  217 (466)
T KOG2532|consen  144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMP--VS-GLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS  217 (466)
T ss_pred             HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHH--hH-HHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999999999999888876  34 667773489999999998887776666554443

>PTZ00207 hypothetical protein; Provisional

Probab=98.51  E-value=6.6e-06  Score=79.89  Aligned_cols=142  Identities=11%  Similarity=0.001  Sum_probs=89.0

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.+.+..... ......+..|++.|| +|+|+.+.++.+...++.+.. .+......   .+......+...+.+++.+
T Consensus        62 ~~l~~i~svg~-~~g~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~-ala~~~~i---~~s~~~l~l~r~l~G~G~~  135 (591)
T PTZ00207         62 RDLSTITTVGI-AVGYFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLF-ALTFQEVI---EGSVVRLSVYNGLMTLGCM  135 (591)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHH-HHHhcccc---cCcHHHHHHHHHHHHHHHH
Confidence            44555554422 223456678999997 999999999999988888666 43211100   0111133444445555666


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      ...+.......+.+| ++||++.|+......+|+.+.+.+..  +...+   +++..|++.++..++..++...
T Consensus       136 ~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~--~l~~~---~~~~~fl~l~vl~~vv~ll~~~  203 (591)
T PTZ00207        136 LFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQL--AFFSD---NTSAYFFFLMSFALVVGILAIV  203 (591)
T ss_pred             HHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---hHHHHHHHHHHHHHHHHHHHHh
Confidence            666666677788876 78999999999999999986554332  22222   3456666666655555444443

>KOG0253|consensus

Probab=98.49  E-value=4.1e-07  Score=80.21  Aligned_cols=126  Identities=15%  Similarity=0.181  Sum_probs=85.8

Q ss_pred             HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc--cchhH--HHHHHHHHHHHHHhhhccccchhhhc
Q psy10432         55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF--SSDFY--ILLYGRLFGGIATSILFSGFESWYVN  129 (440)
Q Consensus        55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~--~~~~~--~l~~~r~l~G~~~~~~~~~~~~~~~~  129 (440)
                      +.++.-..+.+   +.+++.||+|||+.+..+.+++++. .+...  .+|..  .+..+|++...    .+.+.+.+.. 
T Consensus       389 itslaefPGlL---It~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~fqvaYvYtP-  460 (528)
T KOG0253|consen  389 ITSLAEFPGLL---ITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AFQVAYVYTP-  460 (528)
T ss_pred             HHHHhhCCchh---HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hheEEEEecC-
Confidence            45555566666   9999999999999999999999887 43333  33332  23445554433    3333344556 


Q ss_pred             cccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcc
Q psy10432        130 EHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWE  198 (440)
Q Consensus       130 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~  198 (440)
                           |.+|..-|+...|.-+.+.-+|.++.|+++ ...+.   +...+..+.....++..+... ++|
T Consensus       461 -----EVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~---s~sl~i~vy~~~~ilagIavc-ffP  519 (528)
T KOG0253|consen  461 -----EVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL---STSLPIFVYGALFILAGIAVC-FFP  519 (528)
T ss_pred             -----cccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc---ceeehHHHHHHHHHHHHHHhe-eee
Confidence                 999999999999999999999999999999 33333   223455555555555555444 345

>KOG2615|consensus

Probab=98.46  E-value=1.2e-06  Score=77.68  Aligned_cols=111  Identities=16%  Similarity=0.134  Sum_probs=85.5

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      ...|++-+.+.+...+.++..|.++|| +|||.++..+....++..+.. ..       .      ..+..+.+..+..|
T Consensus        68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~-~~-------S------~~F~afv~aR~l~G  132 (451)
T KOG2615|consen   68 FYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLW-AL-------S------RNFAAFVLARFLGG  132 (451)
T ss_pred             hhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHH-HH-------H------HHHHHHHHHHHhhh
Confidence            567888899999999999999999997 999999999998888865444 21       0      11222222234445


Q ss_pred             c---hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC
Q psy10432        338 M---YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG  386 (440)
Q Consensus       338 ~---~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  386 (440)
                      +   ......++++|.+++|+|+.+++..+...++|..+||.  .+ +++..
T Consensus       133 i~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPm--IG-gyla~  181 (451)
T KOG2615|consen  133 IFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPM--IG-GYLAQ  181 (451)
T ss_pred             hccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcch--hh-hHHHh
Confidence            5   34577899999999999999999999999999999999  45 54443

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.43  E-value=2e-06  Score=83.01  Aligned_cols=120  Identities=8%  Similarity=0.072  Sum_probs=86.8

Q ss_pred             ChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc-----ccchhHHHHHHHHHHHHHHhhhcc
Q psy10432         48 DEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK-----FSSDFYILLYGRLFGGIATSILFS  121 (440)
Q Consensus        48 s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~  121 (440)
                      +.+..+.+..+..+...+..+++++++||+|+|+.+..+..+..++ ....     ..++.+.+++.-++.|++.+...+
T Consensus       264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~  343 (473)
T PRK10429        264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV  343 (473)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence            4455555554444555555579999999999999998887766655 3221     234566777777888999888866


Q ss_pred             ccchhhhccccccccccc-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        122 GFESWYVNEHLNYYLFPV-------EWLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                      ...+++.      |..|.       ++.|..++......-+|..+|+.+.|++.+..|+
T Consensus       344 ~~~am~a------d~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy  396 (473)
T PRK10429        344 LQVIMVA------DTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY  396 (473)
T ss_pred             HHHHHHh------hhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            6555566      77652       2345588999999999999999999999887766

>KOG3762|consensus

Probab=98.32  E-value=1.3e-06  Score=80.90  Aligned_cols=152  Identities=11%  Similarity=0.058  Sum_probs=115.6

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGR  109 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r  109 (440)
                      .+....++.--.+|.+..+...|..-.+....-.++-++.+++.+|+|+-+++..++.+..+= +.....+|.|+.+...
T Consensus       387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPie  466 (618)
T KOG3762|consen  387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIE  466 (618)
T ss_pred             HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHH
Confidence            444445554444888866666664333333333333368899999999999999999888886 6788999999999999


Q ss_pred             HHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHH
Q psy10432        110 LFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARAT-FGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLG  188 (440)
Q Consensus       110 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~  188 (440)
                      +++|+..+..+.+..+++.      +..||+-|..+.++.+ ...++|--+|.++||.+.+.+|-  |..|...++.+++
T Consensus       467 ilqgit~aliWaa~~sY~s------~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~--~ttf~~~giAcl~  538 (618)
T KOG3762|consen  467 ILQGITHALIWAAIISYAS------HVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA--RTTFRIFGIACLV  538 (618)
T ss_pred             HHHHHHHHHHHHHHHHHHH------hhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh--HHHHHHHHHHHHH
Confidence            9999999999665555555      9999999999999984 55789999999999999999887  7777666555444


Q ss_pred             HH
Q psy10432        189 ST  190 (440)
Q Consensus       189 ~~  190 (440)
                      ..
T Consensus       539 ~l  540 (618)
T KOG3762|consen  539 TL  540 (618)
T ss_pred             HH
Confidence            33

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.32  E-value=1.4e-06  Score=59.87  Aligned_cols=67  Identities=18%  Similarity=0.231  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHH
Q psy10432         24 FFLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVY   90 (440)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~   90 (440)
                      ++..+.+.+...|+++...++.|.|+.++|.+..+......+..|++|.++||+++++..+....+.
T Consensus         9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~   75 (77)
T PF12832_consen    9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM   75 (77)
T ss_pred             HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence            3444444455889997777999999999999999999999999999999999999988877665543

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=98.27  E-value=2e-05  Score=62.49  Aligned_cols=99  Identities=16%  Similarity=0.121  Sum_probs=81.7

Q ss_pred             hhhhccccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhh
Q psy10432         64 MIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLN  143 (440)
Q Consensus        64 ~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  143 (440)
                      .+..++.+.+.+++|.|+.+++|.+.+.+-....+-++.+.++.+-++.|++.+....+-..++.      +..++++|+
T Consensus        51 ~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt------~~s~~~~~~  124 (156)
T PF05978_consen   51 AISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT------SYSTEETIG  124 (156)
T ss_pred             HHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH------HcCCHHHHh
Confidence            33334777889999999999999999998755567788899999999999999999665555555      888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432        144 LTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus       144 ~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                      +-.++.......+.++|..+.-.+.
T Consensus       125 ~~~~ifw~i~~~s~i~G~~~~~~~~  149 (156)
T PF05978_consen  125 RNTGIFWAIFQSSLIFGNLFLFFIF  149 (156)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999888887765543

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.26  E-value=3.2e-05  Score=69.72  Aligned_cols=117  Identities=15%  Similarity=0.067  Sum_probs=93.3

Q ss_pred             hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHH
Q psy10432        254 EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYE  333 (440)
Q Consensus       254 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (440)
                      +....+++++......+..+.++..+++.+| ++.|+-+..++.+.++++.++.-.....  .+.     ..+.++.+.+
T Consensus        44 ~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa~~~--~y~-----~FL~~lFila  115 (422)
T COG0738          44 DLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAASSK--SYG-----FFLVALFILA  115 (422)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhhhhh--hHH-----HHHHHHHHHH
Confidence            4444888999999999999999999999997 9999999999999999887662111111  121     3455555666


Q ss_pred             HhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        334 ISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      .+.|......+.++....|++...+-+++.+....+|..++|.+.
T Consensus       116 ~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g  160 (422)
T COG0738         116 SGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG  160 (422)
T ss_pred             hhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence            677778888899999998988888999999999999999999843

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.20  E-value=6.5e-05  Score=68.28  Aligned_cols=144  Identities=15%  Similarity=0.201  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHH---HHHHHHHHHhhhhcccccccc-ccchhHHHHHHhHHHHH
Q psy10432         18 VRYFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIAD-KFGRKLICISYGIVYTL   92 (440)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~D-r~Grr~~l~~~~~~~~~   92 (440)
                      ++++...++..++-++.-..+.|.- +-||.+..+...   ....+.+++..   ..|++.. |.++|+.-..++....+
T Consensus       211 ~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~---~~g~~l~~~~~~~~~a~~G~~~~~~  287 (403)
T PF03209_consen  211 RRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGML---LAGFLLSRRLGKKRTAALGCLLGAL  287 (403)
T ss_pred             hHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCCchHHHHHHHHHHHH
Confidence            4455555666666555555665555 668888776654   67777777776   6666666 77888887788877777


Q ss_pred             h-h---hhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432         93 C-C---LTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA  168 (440)
Q Consensus        93 ~-~---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  168 (440)
                      + .   ..+...+.+.+...-++.|++.|.+.....+.+.      |..++++.|..+|.+.....++..+|..++|.+.
T Consensus       288 ~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM------~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~  361 (403)
T PF03209_consen  288 AFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMM------DLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALR  361 (403)
T ss_pred             HHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHH------hCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6 3   3556678899999999999999999888888888      9999999999999999999999999999999987


Q ss_pred             hh
Q psy10432        169 DI  170 (440)
Q Consensus       169 ~~  170 (440)
                      |.
T Consensus       362 D~  363 (403)
T PF03209_consen  362 DL  363 (403)
T ss_pred             HH
Confidence            65

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=98.19  E-value=0.0067  Score=57.96  Aligned_cols=170  Identities=18%  Similarity=0.152  Sum_probs=101.8

Q ss_pred             ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---------hcccCchhhHHHHHH-HHHHHHHHHHHhcccc--
Q psy10432        133 NYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD---------ILNLGPIAPFAVAIP-FLLGSTLFIYFCWEEH--  200 (440)
Q Consensus       133 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~gw~~~~~~~~~~~-~~~~~~~~~~~~~~e~--  200 (440)
                      ..|.++.+|-.|..++...+.++|.++++.+...+.+         .-.|+...-...... ...+........+.+.  
T Consensus       169 AN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl  248 (491)
T PF03219_consen  169 ANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVL  248 (491)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            3499999999999999999999999999998888887         112411111111111 1111112222222211  


Q ss_pred             --CC----CCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC------CchhhHHHHH
Q psy10432        201 --YD----PKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS------PPLGLVFSCF  267 (440)
Q Consensus       201 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~g~~~~~~  267 (440)
                        +.    ..+++++..+.+..++++.++++|.+..+.+............-..|-... +.+.      ...|-.....
T Consensus       249 ~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~t  328 (491)
T PF03219_consen  249 TDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWT  328 (491)
T ss_pred             CccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence              11    111222224456778999999999888877777666666554444444444 2222      3345555666


Q ss_pred             HHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q psy10432        268 MISIMIGSKIYSILILKYFKPETMLTLTVYLATFSI  303 (440)
Q Consensus       268 ~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~  303 (440)
                      ++..++..++.+++.+| +|-+....+.-+...+..
T Consensus       329 Givtii~~~l~~~iir~-~GW~~~AlitPiv~lit~  363 (491)
T PF03219_consen  329 GIVTIIMMFLSSNIIRR-FGWRTAALITPIVILITG  363 (491)
T ss_pred             HHHHHHHHHHHHHHHHH-hhHHHHHHHhHHHHHHHH
Confidence            66667777888999997 888777666544444433

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG0254|consensus

Probab=98.16  E-value=2.7e-05  Score=75.94  Aligned_cols=136  Identities=15%  Similarity=0.129  Sum_probs=104.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchh
Q psy10432        261 GLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYC  340 (440)
Q Consensus       261 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  340 (440)
                      +++.+...++..+++++.|+++|+ +|||+.+..+.+...++.+.. ....         +......+=.+.+++.|...
T Consensus        92 s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~-~~a~---------~~~~l~~GR~l~G~g~G~~~  160 (513)
T KOG0254|consen   92 GLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIII-ALAP---------SWYQLIVGRILTGLGVGGAS  160 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHH-HHhh---------hHHHHHHHHHHhccchhhhh
Confidence            799999999999999999999997 999999999999888887666 3221         11135666667777888888


Q ss_pred             hhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc-chhhHHHHHHHHHHHHHHHHHHH
Q psy10432        341 PVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL-IAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       341 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      .....+.+|..|++.||...+..+....+|..++..  .  +...+.. .+|+..+.+..+..++..+..+.
T Consensus       161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~--~--~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~  228 (513)
T KOG0254|consen  161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYC--I--NYGTSKVYAGWRIPLGLALIPAVILALGMLF  228 (513)
T ss_pred             hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHH--H--hhhhccCCccHHHHHHHHHHHHHHHHHHHHh
Confidence            889999999999999999999999999988888843  2  2333211 47887777776666665555333

>PRK11462 putative transporter; Provisional

Probab=98.14  E-value=4.5e-05  Score=73.23  Aligned_cols=116  Identities=9%  Similarity=-0.041  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc-c-hhHHHHHHHHHHHHHHhhhccccchhhh
Q psy10432         52 IALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS-S-DFYILLYGRLFGGIATSILFSGFESWYV  128 (440)
Q Consensus        52 ~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~  128 (440)
                      .+.+.....+.+.+..+++++++||+|+|+.+..+..+..+. .+..+. . +...+++.-++.|++.+...+...+++.
T Consensus       265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a  344 (460)
T PRK11462        265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS  344 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333334444444469999999999999877555544443 322222 2 2333444556677777665443344444


Q ss_pred             cccccccccc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        129 NEHLNYYLFP-------VEWLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       129 ~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                            |..+       +++.+..++.......+|..+|+.+++.+.+..|+
T Consensus       345 ------d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy  390 (460)
T PRK11462        345 ------DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY  390 (460)
T ss_pred             ------HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence                  5554       22234456777788999999999999998877666

>KOG2533|consensus

Probab=98.10  E-value=3.8e-05  Score=73.23  Aligned_cols=141  Identities=13%  Similarity=0.080  Sum_probs=102.2

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        257 SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       257 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      +.+.+...+.+.++.+++.+..+.+.|| ++..+.+....+...+..++...    ..  ..    +..+..=.+.++..
T Consensus        80 ~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~----~~--s~----~~~ialr~llGl~e  148 (495)
T KOG2533|consen   80 GNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAA----VH--SF----PGLIALRFLLGLFE  148 (495)
T ss_pred             hhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHH----Hh--hh----HHHHHHHHHHHHHh
Confidence            4788999999999999999999999998 88555544444333332222211    00  11    12334444566678


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccc-----cCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAE-----GGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      +..+|....++.....+++||..+|+.....++|+++|+.+..  +..     .. ..||++.|++.+++.+...++.++
T Consensus       149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~--g~~~~~~~~~-~~gW~~~FiI~G~i~~~~gi~~f~  225 (495)
T KOG2533|consen  149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAY--GVFKLNGSGG-LAGWRWLFIIEGVITLVLGIVVFF  225 (495)
T ss_pred             cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHH--HhhhhcCCCC-cCCceeehhHHHHHHHHHHheEEE
Confidence            8899999999999999999999999999999999999998542  311     23 678999999999887776655443

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=98.10  E-value=0.00073  Score=62.90  Aligned_cols=329  Identities=12%  Similarity=-0.004  Sum_probs=158.5

Q ss_pred             hHhhhHhh--cCCChhhHHHH--HHHHHHHHhhhhcccccccc-----ccchhHHHHH------HhHHHHHh-hhh----
Q psy10432         37 YVYKVYKD--YGYDEKNIALL--YIAGFASSMIFGIVVGSIAD-----KFGRKLICIS------YGIVYTLC-CLT----   96 (440)
Q Consensus        37 ~~~~~~~~--~g~s~~~~~~~--~~~~~~~~~l~~~~~G~l~D-----r~Grr~~l~~------~~~~~~~~-~~~----   96 (440)
                      -+|-+.++  -+.|.+|.+..  .+..+..-.    +|.++.|     |+||||..++      |..+..++ ...    
T Consensus        22 siPflL~~~~~~~sy~q~~~fSla~~PfSlKl----LWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~   97 (544)
T PF13000_consen   22 SIPFLLQSMAKKVSYSQQAIFSLASYPFSLKL----LWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLL   97 (544)
T ss_pred             cchhhhccccCCCChhHheeeeeeechhHHHH----hhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhc
Confidence            35455566  67888888762  222333333    5666666     8999998554      33333333 120    


Q ss_pred             ------cc-------cchh--HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHH
Q psy10432         97 ------KF-------SSDF--YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSG  161 (440)
Q Consensus        97 ------~~-------~~~~--~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~  161 (440)
                            ..       .++.  ..+...-++.=+-.+...-+.+.|..      ....+++++.+..-...+.++|..++-
T Consensus        98 ~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWAL------T~Ls~~n~~~ASTcqtvG~~~Gyfls~  171 (544)
T PF13000_consen   98 FDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWAL------TMLSPENVGYASTCQTVGQTAGYFLSF  171 (544)
T ss_pred             ccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhh------hhcChhhcchHHHHHHhHhhhhHHHHH
Confidence                  00       0011  12233333444445566666677777      888899999888888888888887776


Q ss_pred             HHHHHHHh------hc-------ccCc-hhhHHHHHHHHHHHHHHHHHhccccCCCCC----------c--cC-------
Q psy10432        162 FTAHFFAD------IL-------NLGP-IAPFAVAIPFLLGSTLFIYFCWEEHYDPKT----------A--KS-------  208 (440)
Q Consensus       162 ~~~~~l~~------~~-------gw~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----------~--~~-------  208 (440)
                      .+--.+.+      ++       |.-. ......-+.+.++..+++.++-+|++..+.          +  ++       
T Consensus       172 tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (544)
T PF13000_consen  172 TVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYD  251 (544)
T ss_pred             HHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecc
Confidence            55444321      10       1100 001112222233334444444455432110          0  00       


Q ss_pred             CCC------ccchhh---hhhhhccCcchHHHHHHHHHHHhHHHHHHHhh-hhhh--hccCCchhhHHHHHHHHHHHHHH
Q psy10432        209 SLL------PNSMFS---SLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVW-TPVL--EVLSPPLGLVFSCFMISIMIGSK  276 (440)
Q Consensus       209 ~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~g~~~~~~~~~~~~~~~  276 (440)
                      +.+      ..+.++   ....++|.|.+..+.+.....-.++...-... ...+  +...++.++...+..-..++...
T Consensus       252 ~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~  331 (544)
T PF13000_consen  252 ESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPY  331 (544)
T ss_pred             cccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHH
Confidence            000      011222   23345677777776666555554443221111 1111  12224555444444444555555


Q ss_pred             HHHHHHhhccCCc---------------------------hhHHHHHHHHHHHHHHH-HHhhhcc-ccchhhcchhHHHH
Q psy10432        277 IYSILILKYFKPE---------------------------TMLTLTVYLATFSITVS-TVLTSSL-FDSRRVLSTNLCFV  327 (440)
Q Consensus       277 ~~g~l~~r~~~~~---------------------------~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~  327 (440)
                      ..++++.. ..+.                           +....++..-.+..+.. ......+ +...........+.
T Consensus       332 ~~~Kws~g-~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~  410 (544)
T PF13000_consen  332 YIGKWSAG-SPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVII  410 (544)
T ss_pred             HhhhhhcC-CCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHH
Confidence            55555532 2210                           11122222222221111 0111112 11111101112233


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ...+..+.....+....+.-+++.++..-|+.+.+.|+..|+|+---..
T Consensus       411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~  459 (544)
T PF13000_consen  411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRT  459 (544)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHH
Confidence            3334445555566677788889999999999999999999999755443

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG0255|consensus

Probab=98.05  E-value=4.8e-05  Score=74.55  Aligned_cols=135  Identities=13%  Similarity=0.006  Sum_probs=98.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      ....+..+...+|.++|+++.|.++|| +|||+.+..+..+..++.+.. .+         .++.....+.=.+.+++.+
T Consensus       118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~-a~---------a~~~~~~~~~Rfl~G~~~~  186 (521)
T KOG0255|consen  118 TLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILT-AF---------APNYWMFLIFRFLSGFFGS  186 (521)
T ss_pred             hHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHH-HH---------hCcHHHHHHHHHHHHhhcc
Confidence            556677888899999999999999998 999999999998888877544 21         1111123343344555566


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASC  410 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (440)
                      ........+..|.+++++|+.+..+ ......++.+++...   +.+..   +|++.+++..+..+...+..+
T Consensus       187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~---a~~~~---~Wr~~~~~~~~~~~~~~~~~~  252 (521)
T KOG0255|consen  187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA---AYITR---DWRWLFWIISIPSGLFLLLWF  252 (521)
T ss_pred             chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH---HHHHh---hHHHHHHHHHHHHHHHHHHHH
Confidence            6777888899999999999999999 767777777777633   33333   678888888777776655533

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.01  E-value=0.00013  Score=68.19  Aligned_cols=112  Identities=13%  Similarity=0.186  Sum_probs=86.1

Q ss_pred             HHHHHHHHhhh-hccccccccccchhHHHHHHhHHHHHh-hhhccc--chhHHHHHHHHHHHHHHhhhccccchhhhccc
Q psy10432         56 YIAGFASSMIF-GIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS--SDFYILLYGRLFGGIATSILFSGFESWYVNEH  131 (440)
Q Consensus        56 ~~~~~~~~~l~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~  131 (440)
                      .........+. .+++.++++|+|+|+++..+.++..++ ++..+.  ++.+..++..++.+++.+...+...++++   
T Consensus       277 ~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~---  353 (467)
T COG2211         277 LLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVA---  353 (467)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhc---
Confidence            33333344444 379999999999999999999999998 554444  47888899999999999998776666666   


Q ss_pred             cccccccch-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy10432        132 LNYYLFPVE-------WLNLTFARATFGSGLFAIVSGFTAHFFADILNL  173 (440)
Q Consensus       132 ~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw  173 (440)
                         |..+-+       +-|...+......=+|..++..+.++..+..|+
T Consensus       354 ---d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy  399 (467)
T COG2211         354 ---DTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY  399 (467)
T ss_pred             ---chhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence               665533       235677888888889999999999998888776

>KOG2325|consensus

Probab=97.94  E-value=0.00022  Score=66.96  Aligned_cols=150  Identities=15%  Similarity=0.048  Sum_probs=95.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCC-chhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKP-ETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (440)
                      ...|++.+...++..++++..|++..| .+. |+.+..+.+.++++.++.+.+...++. +..    ..+.+-.+.+++.
T Consensus        71 ~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~-~~y----~mL~~R~l~Gvg~  144 (488)
T KOG2325|consen   71 TFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLIVSFLIAIIGNLLYLALAYVPNG-VKY----LMLVARILTGVGV  144 (488)
T ss_pred             chhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHHHHHHHHHHHHHHHHHHHhcccc-hHH----HHHHHHHHcCcCc
Confidence            678999999999999999999999997 554 777888888888887666344333331 222    3444444433333


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCc---------cchhhHHHHHHHHHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGK---------LIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  407 (440)
                      |. ......++++..-.++|.++++.......+|..+||.+-..++.+.+.         ...|..+-++++++.++..+
T Consensus       145 ~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v  223 (488)
T KOG2325|consen  145 GN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV  223 (488)
T ss_pred             cc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence            33 335566777766678888888888887788888888643221212110         22355666666666666555


Q ss_pred             HHH-Hhhh
Q psy10432        408 ASC-VFKR  414 (440)
Q Consensus       408 ~~~-~~~~  414 (440)
                      +.. .+++
T Consensus       224 ~i~~~f~E  231 (488)
T KOG2325|consen  224 IILFFFKE  231 (488)
T ss_pred             HHHhheee
Confidence            544 4444

>KOG0252|consensus

Probab=97.93  E-value=9e-05  Score=67.87  Aligned_cols=114  Identities=14%  Similarity=0.108  Sum_probs=82.5

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      ...+.+.....++.++|+++.|++.|| +|||++.-..++++.++.++. ......+.+...  ...+...=.+.+++.|
T Consensus        84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~-~~s~~~~~~~~~--m~~L~~~R~~LGiGIG  159 (538)
T KOG0252|consen   84 GVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALS-GLSVGTTSPLGV--MMTLCFFRFLLGIGIG  159 (538)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHh-ccCCCCCCCcch--hhHHHHHHHHhhcccc
Confidence            456778888889999999999999997 999999988888888887644 333222222111  0012222225566777


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~  375 (440)
                      .-+|...+..+|....+.||+..+..-..++.|...|.
T Consensus       160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~  197 (538)
T KOG0252|consen  160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG  197 (538)
T ss_pred             CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence            79999999999999999999988887777777655554

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=97.81  E-value=0.00039  Score=59.91  Aligned_cols=132  Identities=17%  Similarity=0.140  Sum_probs=82.3

Q ss_pred             HHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc
Q psy10432        238 YEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL  313 (440)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (440)
                      ..+..|.+- .+.|.+ +..+   .+...+-....++..+ ++..|.+.|+ .+++..+.++.....++...+ +.....
T Consensus        14 ~~Gt~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~-~l~~~~   89 (250)
T PF06813_consen   14 CSGTTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDR-FGPWVVLLIGAVLGFVGYGLL-WLAVSG   89 (250)
T ss_pred             hcCcccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH-HHHHhC
Confidence            334445453 355655 3333   5566666666777766 4888999997 999999999999999988776 443222


Q ss_pred             ccc--hhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        314 FDS--RRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       314 ~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ...  ..+    ......++.+.+.+...........+++| ++||++.|+.-....+++.+-..+.
T Consensus        90 ~i~~~~~~----~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~  151 (250)
T PF06813_consen   90 RIPSLPVW----LMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIY  151 (250)
T ss_pred             ccCccchH----HHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHH
Confidence            211  111    22222222222222233333344446777 5899999999999999988887744

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=97.76  E-value=0.00055  Score=63.88  Aligned_cols=105  Identities=11%  Similarity=0.108  Sum_probs=81.3

Q ss_pred             HHHHHHhHHHHHh-hhh---cccch------hHHHHHHHHHHHHHHhhhccccchhhhccccccccccch---hhhHHHH
Q psy10432         81 LICISYGIVYTLC-CLT---KFSSD------FYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVE---WLNLTFA  147 (440)
Q Consensus        81 ~~l~~~~~~~~~~-~~~---~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~  147 (440)
                      |+++++.+++.+| ++.   +.-++      .+.++++-.+.++|.|..-|+..++..      |.++++   +|.+.+.
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~------dq~~~~~~~~~~~~F~   75 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGA------DQYDEDDDSRRDSFFN   75 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHH------HCSSTTTTTHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHH------HHhcccchhhhhhhHH
Confidence            4667777777777 442   22222      367899999999999999999888888      877765   5778899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHH
Q psy10432        148 RATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFI  193 (440)
Q Consensus       148 ~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~  193 (440)
                      ++..+.++|..+++.+.+++.+..||  ...|.+..+..++..+..
T Consensus        76 ~fY~~in~G~~~~~~~~~~i~~~~~~--~~~f~i~~~~~~~~~~~f  119 (372)
T PF00854_consen   76 WFYWGINIGSLFSPTLVPYIQQNYGW--FLGFGIPAIGMLLALIVF  119 (372)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHCS-H--HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhHhhcccchhhccccch--hhhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999  778887777666555443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=97.70  E-value=5.5e-07  Score=86.54  Aligned_cols=145  Identities=13%  Similarity=0.167  Sum_probs=102.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY  339 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  339 (440)
                      .++..+...++.++|+++.|++.|| +|||+.+..+..+..++.+.. .+...... +.     ....+-.+.+++.|..
T Consensus        48 ~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~-~~~~~~~~-~~-----~~~~~R~~~G~~~g~~  119 (451)
T PF00083_consen   48 SSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILI-AFAPSYNN-FW-----MLLIGRFLIGFGIGGA  119 (451)
T ss_pred             HHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccc-cccccccc-cc-----cccccccccccccccc
Confidence            5677888889999999999999997 999999999888887777555 32221101 11     2344445666678888


Q ss_pred             hhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        340 CPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       340 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      .+....++.|..|++.|+...++.+....+|..++..+........+ ...|+..+....+..++..+.....+
T Consensus       120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~Wr~~~~~~~~~~l~~~~~~~~~p  192 (451)
T PF00083_consen  120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD-NWGWRILLIFGAIPSLLVLLLRFFLP  192 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence            88999999999999999999999999988888888763211111112 23477777777666655444444333

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=97.69  E-value=0.048  Score=51.11  Aligned_cols=263  Identities=14%  Similarity=0.097  Sum_probs=140.2

Q ss_pred             hhHhhhHhhcCC---ChhhHHHHHHHHHHHHh-hhhccccccccccchhHHHHHHhHHHHHh-hhhccc---------ch
Q psy10432         36 PYVYKVYKDYGY---DEKNIALLYIAGFASSM-IFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS---------SD  101 (440)
Q Consensus        36 ~~~~~~~~~~g~---s~~~~~~~~~~~~~~~~-l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~---------~~  101 (440)
                      .++-++-+.+.+   ++..+..+-..+...+. ++.++.+++.+++.|.+++-.-+..+... .++++.         ++
T Consensus        44 ~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~  123 (509)
T COG3202          44 NLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPD  123 (509)
T ss_pred             HHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence            344344455544   34555556566666443 33478999999999999865544333332 222211         11


Q ss_pred             -----------------------hHHHHHHHHHHHHHHhhhcc-ccchhhhccccccccccchhhhHHHHHHHHHHHHHH
Q psy10432        102 -----------------------FYILLYGRLFGGIATSILFS-GFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFA  157 (440)
Q Consensus       102 -----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~  157 (440)
                                             .|..-+.....=+=.+.... .......      |.+..+|-.|..++++.+.+++.
T Consensus       124 ~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faN------eitt~~eakRFy~lf~l~~ni~l  197 (509)
T COG3202         124 PEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFAN------EITTIEEAKRFYPLFGLGANISL  197 (509)
T ss_pred             HHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHH------HhhhHHHhhhhHHHHHHHHHHHH
Confidence                                   02111111111111111111 1111224      88888999999999999999999


Q ss_pred             HHHHHHHHHHHhhc-cc---C----chhhHHHHHHHHHHHHHHHHHhcc----ccCC-----CCCccCCCCccchhhhhh
Q psy10432        158 IVSGFTAHFFADIL-NL---G----PIAPFAVAIPFLLGSTLFIYFCWE----EHYD-----PKTAKSSLLPNSMFSSLK  220 (440)
Q Consensus       158 ~~g~~~~~~l~~~~-gw---~----~~~~~~~~~~~~~~~~~~~~~~~~----e~~~-----~~~~~~~~~~~~~~~~~~  220 (440)
                      .++..+..++.++- .+   .    -+..+.+......+ .+...+++.    +++.     .++++++..+....++++
T Consensus       198 llsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i-~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k  276 (509)
T COG3202         198 LLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGII-AILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFK  276 (509)
T ss_pred             HHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHH
Confidence            99988888887641 10   0    01222222222222 222222222    2222     111122223445678889


Q ss_pred             hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hcc------CCchhhHHHHHHHH-HHHHHHHHHHHHhhccCCchhH
Q psy10432        221 FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVL------SPPLGLVFSCFMIS-IMIGSKIYSILILKYFKPETML  292 (440)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~g~~~~~~~~~-~~~~~~~~g~l~~r~~~~~~~~  292 (440)
                      .+.++|.++.+.+...+...+...+-..|-.-. +.+      ..-.|-.....++. .++....++.+.+| .|-....
T Consensus       277 ~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~-~GW~~~A  355 (509)
T COG3202         277 MILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRR-VGWFTGA  355 (509)
T ss_pred             HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-hhHHHHH
Confidence            999999888877777776666655544444333 111      13334444455555 55666788889997 8777666


Q ss_pred             HHHHHHHHHHHHHH
Q psy10432        293 TLTVYLATFSITVS  306 (440)
Q Consensus       293 ~~~~~~~~~~~~~~  306 (440)
                      .+.-+...++.++.
T Consensus       356 litPiv~litg~lF  369 (509)
T COG3202         356 LITPLVMLITGVLF  369 (509)
T ss_pred             HHHHHHHHHHHHHH
Confidence            65555555554333

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=97.58  E-value=0.0015  Score=64.93  Aligned_cols=152  Identities=12%  Similarity=0.102  Sum_probs=102.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      ..+..++.......-+...++|++.|+++|+++.+.++.++..++..++ .+...+..... ......+.++.+...+.|
T Consensus        23 ~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~ll-ai~a~~~~~~~-~~~~~~l~gLaLia~G~G  100 (654)
T TIGR00926        23 STSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALL-SFGAIPSSGHP-LHDLLDLLGLALIALGTG  100 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HhccCcccccc-hHHHHHHHHHHHHHhhcc
Confidence            4444455555555567778899999988899999988888888877655 33222111000 001124566667777888


Q ss_pred             chhhhHHhHhccCCcch---hhHHHHHHhhhhhhhHHHHHHHHhhccccccC------ccchhhHHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEK---ARATITNWLRVPTNFITCFTLIFIKNEDAEGG------KLIAIHSVFVVCTACLLVALLA  408 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  408 (440)
                      ..-|...+...+..+++   ++-+.+.+.....++|+.+++.+.   ..+.+      ...+|...|.+.+++++++.++
T Consensus       101 giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~---~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv  177 (654)
T TIGR00926       101 GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIIT---PILRGDVGCFGCQDCYPLAFGVPAILMILALIV  177 (654)
T ss_pred             ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence            88888888888877643   467788888889999999888754   33321      0236888999998888888777


Q ss_pred             HHHhhh
Q psy10432        409 SCVFKR  414 (440)
Q Consensus       409 ~~~~~~  414 (440)
                      ....++
T Consensus       178 f~~g~k  183 (654)
T TIGR00926       178 FMAGSK  183 (654)
T ss_pred             HHHhcc
Confidence            665444

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.54  E-value=0.00025  Score=49.19  Aligned_cols=72  Identities=8%  Similarity=0.144  Sum_probs=60.2

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHH---HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIAL---LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYIL  105 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~---~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l  105 (440)
                      ...+.|.+|.+.+|.++|.++.++   ...+||+++.+   ...++.++..+++.+..+.+...+. ..+++.++++..
T Consensus         8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl---~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w   83 (85)
T PF06779_consen    8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGAL---LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW   83 (85)
T ss_pred             HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence            445889999999999999999988   67778888876   8888889988888899999988888 688888877654

Note that many members are hypothetical proteins.

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.48  E-value=0.015  Score=52.44  Aligned_cols=149  Identities=11%  Similarity=-0.000  Sum_probs=86.8

Q ss_pred             hhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHH
Q psy10432        252 VLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVA  328 (440)
Q Consensus       252 ~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (440)
                      .|+.++   .+++.++........+...+.|.+.|| +|||+......++..++++.- .    .+. ..     .++++
T Consensus        60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k-~----~~~-~~-----~L~~G  127 (354)
T PF05631_consen   60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTK-H----SSN-YP-----VLLLG  127 (354)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH-h----ccc-cH-----HHHHH
Confidence            335555   678888888888899999999999998 999998888777777766433 1    111 11     23444


Q ss_pred             HHHHHHhhhchhhhHHhHh-----ccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccC-ccchhhHHHHHHHHHH
Q psy10432        329 FLIYEISVGMYCPVTGYLR-----GRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGG-KLIAIHSVFVVCTACL  402 (440)
Q Consensus       329 ~~~~~~~~g~~~~~~~~~~-----~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  402 (440)
                      =.+.++...+.+...-++.     .+-.|++..+..++......|...+++.-++ + ....+ ...+...+|.....+.
T Consensus       128 RvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~-a-~~l~~~~~~g~vaPF~~a~~~l  205 (354)
T PF05631_consen  128 RVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVV-A-NVLADWFGFGPVAPFDAAIVLL  205 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHH-H-HHHHHHhCCCCcchHHHHHHHH
Confidence            3333334444444332222     2335667777777655533333323332222 1 12222 0224477888888887


Q ss_pred             HHHHHHHHHhhh
Q psy10432        403 LVALLASCVFKR  414 (440)
Q Consensus       403 ~~~~~~~~~~~~  414 (440)
                      .++.++.....+
T Consensus       206 ~~~~~~I~~~W~  217 (354)
T PF05631_consen  206 AVAAVLILKTWP  217 (354)
T ss_pred             HHHHHHHHhccc
Confidence            777776654443

>KOG3880|consensus

Probab=97.37  E-value=0.0027  Score=55.16  Aligned_cols=295  Identities=13%  Similarity=0.044  Sum_probs=151.5

Q ss_pred             HHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhhhccccc
Q psy10432         55 LYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLN  133 (440)
Q Consensus        55 ~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~  133 (440)
                      .-.+..+...+   ......||+---+-..+..++.+.+ .+.+++++.++-+.+-.+..++.|.......++-.     
T Consensus        70 aDilPsL~iKl---~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-----  141 (409)
T KOG3880|consen   70 ADILPSLAIKL---TAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-----  141 (409)
T ss_pred             hhhhHHHHHHH---hchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-----
Confidence            33444444444   5666778764322233445556667 68899999999999988888888876443322222     


Q ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCc----c--
Q psy10432        134 YYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTA----K--  207 (440)
Q Consensus       134 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~----~--  207 (440)
                        .+    .....+.++.+.+.+.++|..--..+.++.+...+...++...+-++.+...++.+++++.....    .  
T Consensus       142 --~Y----~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~  215 (409)
T KOG3880|consen  142 --RY----PSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE  215 (409)
T ss_pred             --cC----CCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce
Confidence              22    22345566677777778888777777777777777766666655544444445555543321100    0  


Q ss_pred             ---C--------CCC-----ccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc---cC------Cchhh
Q psy10432        208 ---S--------SLL-----PNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV---LS------PPLGL  262 (440)
Q Consensus       208 ---~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~g~  262 (440)
                         +        +.+     ....++.++.   -++++..++-....+..-|.......+.+..   .|      .+.-+
T Consensus       216 ~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~---i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRw  292 (409)
T KOG3880|consen  216 IIPSQYLPFEAAEEKSVPSRRLGLKETLKR---IKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRW  292 (409)
T ss_pred             eccCCCCcccccccccCchhhhcHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchh
Confidence               0        000     1111122211   1233334444555555555444434443311   11      33444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhh
Q psy10432        263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPV  342 (440)
Q Consensus       263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  342 (440)
                      ....+.+|..+.+-     +-| .=+-+.+..-.++..+-.+.. .+   ....|..|.....++.+..-+..-|..+..
T Consensus       293 yqvlYQlGVFiSRS-----S~~-~~~~p~l~~LailQ~vNl~ff-~~---~a~~~ftpsi~ivf~lI~~EGLlGGasYVN  362 (409)
T KOG3880|consen  293 YQVLYQLGVFISRS-----SIN-LFTMPYLWLLAILQFVNLLFF-LL---QAWYWFTPSIWIVFALILFEGLLGGASYVN  362 (409)
T ss_pred             hheeeeeeEEEEec-----cce-EEechHHHHHHHHHHHHHHHH-HH---HHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence            54555544433221     111 112222222223333322221 11   111133322223444444344445555665


Q ss_pred             HHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        343 TGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       343 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ..--+.+..++++|--+++.....-.+|..++..
T Consensus       363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~  396 (409)
T KOG3880|consen  363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGL  396 (409)
T ss_pred             HHHHHhhcCCchHHHHhHhhheecchhhHHHHHH
Confidence            5556666668899999999999888888887776

>KOG2816|consensus

Probab=97.33  E-value=0.0037  Score=59.42  Aligned_cols=130  Identities=15%  Similarity=0.095  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432        267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL  346 (440)
Q Consensus       267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  346 (440)
                      .++..++.++..|.++|| +|||..+........+....+.. ..     |.      .++ ..-.....+.......++
T Consensus        71 ~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~~l~~~~~~~-~~-----~~------~~~-~~~l~g~~~~~~s~~~a~  136 (463)
T KOG2816|consen   71 AGLLTLISSPLIGALSDR-YGRKVVLLLPLFGTILPALCLLF-QG-----YW------FFL-LLGLSGGFSAIFSVGFAY  136 (463)
T ss_pred             hHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHHHHhHHHHHH-HH-----HH------Hhh-hcccccchhhhhhhhhhh
Confidence            367888999999999997 99999988888777776655522 11     11      111 111111233356677888


Q ss_pred             hccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        347 RGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +.+....+.|....|+.+.....+..++|.  .+ +.... ..++...|.+..+..++..+......+
T Consensus       137 vadis~~~~R~~~~gll~~~~~~~~~~~p~--~~-~~~~~-~~~~a~~f~ia~~~~~~~~~y~~~~l~  200 (463)
T KOG2816|consen  137 VADISSEEERSSSIGLLSGTFGAGLVIGPA--LG-GYLVK-FLGIALVFLIAAASGILSLLYMLLFLP  200 (463)
T ss_pred             eeeccchhHHHHHHHHHHHHHHHHHhHHHH--HH-HHHHH-hcCchHHHHHHHHHHHHHHHHHhhccc
Confidence            999999999999999999999999999998  34 66666 678888999988888877776655443

>KOG1237|consensus

Probab=97.30  E-value=0.11  Score=51.05  Aligned_cols=147  Identities=11%  Similarity=-0.011  Sum_probs=97.4

Q ss_pred             hhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhccc--------------
Q psy10432         36 PYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFS--------------   99 (440)
Q Consensus        36 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~--------------   99 (440)
                      ..+..+.++++.+...+.-....-.....+..+..+.++|- +||-+++.++.++..++ .+..++              
T Consensus        59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~  138 (571)
T KOG1237|consen   59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK  138 (571)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence            34434447777766554444444444444444689999996 48888888877766665 221110              


Q ss_pred             ------c-----hhHHHHHHHHHHHHHHhhhccccchhhhcccccccccc---ch-hh--hHHHHHHHHHHHHHHHHHHH
Q psy10432        100 ------S-----DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFP---VE-WL--NLTFARATFGSGLFAIVSGF  162 (440)
Q Consensus       100 ------~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~r--~~~~~~~~~~~~~g~~~g~~  162 (440)
                            +     ....++.+.-+..+|.|..-|...++-.      |.++   ++ ++  ..-+.++....+.|..++..
T Consensus       139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGa------dQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t  212 (571)
T KOG1237|consen  139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGA------DQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT  212 (571)
T ss_pred             CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcc------cccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence                  0     1235677777888899998888777777      8777   32 22  36788889999999999998


Q ss_pred             HHHHHHhhcccCchhhHHHHHHHHHHHH
Q psy10432        163 TAHFFADILNLGPIAPFAVAIPFLLGST  190 (440)
Q Consensus       163 ~~~~l~~~~gw~~~~~~~~~~~~~~~~~  190 (440)
                      +-.+.-+..+|  ..-|.+......++.
T Consensus       213 ~~vyiq~~~~w--~lgf~i~~~~~~lai  238 (571)
T KOG1237|consen  213 VLVYIQDNVGW--KLGFGIPTVLNALAI  238 (571)
T ss_pred             HHHhhhhcccc--eeeccHHHHHHHHHH
Confidence            88888888899  655655554444333

>KOG2563|consensus

Probab=97.28  E-value=0.03  Score=51.83  Aligned_cols=113  Identities=14%  Similarity=0.038  Sum_probs=73.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhcc---ccchhhcchhHHHHHHHHHHH
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSL---FDSRRVLSTNLCFVAFLIYEI  334 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  334 (440)
                      ..+-+...++.+..+.-.+..-|+.|| +|-|....++....+++..+= .....+   +..+..    ....+-.+.+.
T Consensus        79 ~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir-~iss~p~v~~~f~~~----l~~~Gq~iaa~  152 (480)
T KOG2563|consen   79 SAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIR-LISSLPFVPPLFRRP----LTHTGQSIAAA  152 (480)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHh-hhccCccccccchhh----hhHHhHHHHHH
Confidence            344566777888888889999999997 999999999998888877544 333333   222211    22333332222


Q ss_pred             hhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        335 SVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       335 ~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ..-.......-+....+|+++|+.+..+..+...+|.+++..
T Consensus       153 Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l  194 (480)
T KOG2563|consen  153 AQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL  194 (480)
T ss_pred             hhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence            222222233344555689999999999888888888777665

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=97.18  E-value=0.23  Score=47.25  Aligned_cols=113  Identities=12%  Similarity=0.101  Sum_probs=64.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCc-hhHHHHHHHHHHHHHHHHHhhhccc-cch--hhcchhHHHHHHHHHHHhh
Q psy10432        261 GLVFSCFMISIMIGSKIYSILILKYFKPE-TMLTLTVYLATFSITVSTVLTSSLF-DSR--RVLSTNLCFVAFLIYEISV  336 (440)
Q Consensus       261 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~  336 (440)
                      -..+..+.++..+|+.+..+..-  .+++ +.+.+..+.-.+. +.++.+..... ...  ..+.-...++...++++..
T Consensus       310 ~i~~~~fNvgD~vGR~~~~~~~~--p~~~~~~l~i~s~~R~iF-IPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn  386 (437)
T TIGR00939       310 IICFLLFNLFDWLGRSLTSKFMW--PDEDSRWLPILSFLRVLF-IPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN  386 (437)
T ss_pred             HHHHHHHHHHHHHHhhhhheeEe--eCCCccchHHHHHHHHHH-HHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence            45667778888899886654311  1222 1333333332222 22222222110 000  0011113344556777778


Q ss_pred             hchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        337 GMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       337 g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      |...........+.+++++|..+..+......+|..+|..
T Consensus       387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~  426 (437)
T TIGR00939       387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAV  426 (437)
T ss_pred             hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8877777777888888888888888888888888777776

>KOG3097|consensus

Probab=97.16  E-value=0.089  Score=46.57  Aligned_cols=60  Identities=13%  Similarity=0.206  Sum_probs=49.5

Q ss_pred             cccccccccchhHHHHHHhHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhccccchhhh
Q psy10432         69 VVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFESWYV  128 (440)
Q Consensus        69 ~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~  128 (440)
                      +.+.+..++|-|.++.++...+......-+-+.+..++-.....|++.+....+--+++.
T Consensus        77 ~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT  136 (390)
T KOG3097|consen   77 FMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLT  136 (390)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceec
Confidence            455889999999999999998888866667788999999999999999988655444444

>KOG2601|consensus

Probab=97.07  E-value=0.043  Score=49.37  Aligned_cols=151  Identities=14%  Similarity=0.135  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHhhhhhHhhhH-hhcC-CChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh------
Q psy10432         22 IPFFLATFSDWIQGPYVYKVY-KDYG-YDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC------   93 (440)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~-~~~g-~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~------   93 (440)
                      ..++++..++-+..-.. .++ .+++ -|...++.--.+-.....+++|+.|...|+..|+|++...+.+.-++      
T Consensus        34 ~gy~lt~wgdR~W~F~V-sL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagg  112 (503)
T KOG2601|consen   34 LGYFLTTWGDRMWEFSV-SLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGG  112 (503)
T ss_pred             HHHHHhHhhHhHHHHHH-HHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHH
Confidence            34444444444433333 233 3343 33333322223333344556689999999999999977655543332      


Q ss_pred             -hhhccc------chhHHHHHHHHHHHHHHhh--hccccchhhhccccccccccchhh---hHHHHHHHHHHHHHHHHHH
Q psy10432         94 -CLTKFS------SDFYILLYGRLFGGIATSI--LFSGFESWYVNEHLNYYLFPVEWL---NLTFARATFGSGLFAIVSG  161 (440)
Q Consensus        94 -~~~~~~------~~~~~l~~~r~l~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~g~~~g~  161 (440)
                       ++..+.      .+++.+..+-++.-.-.+.  ......+....+-.+.-....+.+   .+.++.....-....++.|
T Consensus       113 lvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lap  192 (503)
T KOG2601|consen  113 LVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAP  192 (503)
T ss_pred             HHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhh
Confidence             122222      2444444444333322222  112111222211111111133334   4444666777777889999


Q ss_pred             HHHHHHHhhccc
Q psy10432        162 FTAHFFADILNL  173 (440)
Q Consensus       162 ~~~~~l~~~~gw  173 (440)
                      ++.|.+.++.+-
T Consensus       193 v~tg~Iitfvsl  204 (503)
T KOG2601|consen  193 VITGLIITFVSL  204 (503)
T ss_pred             hhhcccceeech
Confidence            999999888776

>PF12832 MFS_1_like: MFS_1 like family

Probab=96.84  E-value=0.012  Score=40.49  Aligned_cols=64  Identities=13%  Similarity=0.158  Sum_probs=44.8

Q ss_pred             HHHHHHHhHHHHHHHhhhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHH
Q psy10432        233 IVQSIYEGIMYTFIFVWTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVY  297 (440)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~  297 (440)
                      ...++.+++...+.-+++.++++.|   .+.|.+.++..+..+++.++.|+++|| .++++.......
T Consensus         7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~   73 (77)
T PF12832_consen    7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSL   73 (77)
T ss_pred             HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHH
Confidence            3344444554444343444444333   889999999999999999999999998 888887655443

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.71  E-value=0.24  Score=47.37  Aligned_cols=119  Identities=8%  Similarity=-0.018  Sum_probs=71.8

Q ss_pred             CchhhHHHHHHHHHHHH-HHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcc---------------
Q psy10432        258 PPLGLVFSCFMISIMIG-SKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLS---------------  321 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~-~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  321 (440)
                      +...++.+...+.+.+. .++.+++++| .++++............+.++ .+...+..+...|.               
T Consensus        43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~~~~F~~~f~lF-~~vl~p~~~~~~p~~~~~~~~~~~~~~~~  120 (472)
T TIGR00769        43 EIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTVISPFLGFFALF-AFVIYPLSDLLHPTALADKLLSLLPPGFM  120 (472)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHHHHHHHHHHHHH-HHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence            45666666665555555 7899999997 999988776655554444333 22211111110000               


Q ss_pred             -------hhHHHHHHHHHHHhhhchhh-hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        322 -------TNLCFVAFLIYEISVGMYCP-VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       322 -------~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                             .+..-..+...........+ ..+..++|....++..|.+++.....++|..+++.+.
T Consensus       121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~  185 (472)
T TIGR00769       121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI  185 (472)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   00001111111111222333 6788999999999999999999999999999999754

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=96.65  E-value=0.097  Score=41.64  Aligned_cols=102  Identities=12%  Similarity=0.039  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhH
Q psy10432        264 FSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVT  343 (440)
Q Consensus       264 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  343 (440)
                      .++......+..++.+.+.++ +|.|+.+.++.+...+-.... ..   +.  + .    ..+.+-.+.+++.+..+...
T Consensus        43 lai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~-~~---~~--~-~----~l~~~s~l~G~~~a~lW~aq  110 (156)
T PF05978_consen   43 LAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASF-FY---PN--S-Y----TLYPASALLGFGAALLWTAQ  110 (156)
T ss_pred             HHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHH-Hh---hh--H-H----HHHHHHHHHhhhhHHhhHhh
Confidence            344445566777888888997 999999998888777655443 21   11  1 1    34555567777788888888


Q ss_pred             HhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHH
Q psy10432        344 GYLRGRIIPEKARATITNWLRVPTNFITCFTLIF  377 (440)
Q Consensus       344 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~  377 (440)
                      ..++.+..+++++++..++.-.+.+.+..+|...
T Consensus       111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~  144 (156)
T PF05978_consen  111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLF  144 (156)
T ss_pred             hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            8889999888999999998888887777777653

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=96.54  E-value=0.039  Score=52.59  Aligned_cols=149  Identities=13%  Similarity=0.134  Sum_probs=83.5

Q ss_pred             hccCCchhhHHHHHHHHHH--HHHHHHHHHHhhcc---C--CchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHH
Q psy10432        254 EVLSPPLGLVFSCFMISIM--IGSKIYSILILKYF---K--PETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCF  326 (440)
Q Consensus       254 ~~~~~~~g~~~~~~~~~~~--~~~~~~g~l~~r~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (440)
                      +..+.+.........+..+  ...++.|.++|- +   |  ||.-+.++.++..++...+...........      ...
T Consensus        18 ~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~-~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~------~~~   90 (433)
T PF03092_consen   18 DDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDS-FPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA------IAV   90 (433)
T ss_pred             HHcCCCHHHHHHHHHHHhCchHHhhhHHhhccc-ccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh------hHH
Confidence            4445444444444444443  345899999996 4   2  333455566555444444422222111111      222


Q ss_pred             HHHHHHHHhhhchhhhHHhHhccCC---cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432        327 VAFLIYEISVGMYCPVTGYLRGRII---PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL  403 (440)
Q Consensus       327 ~~~~~~~~~~g~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (440)
                      +.+.+..++....-....++..|..   |.+ +|...+.......+|+.++..  .+ |...+ ..+++..|.+.+.+..
T Consensus        91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~--l~-G~l~~-~~~~~~~f~i~~~~~~  165 (433)
T PF03092_consen   91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSL--LS-GPLLD-SFGPQGVFLISAALPL  165 (433)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHH--hh-hhhhh-cCCCeEEehHHHHHHH
Confidence            3333333444444444555555543   444 788888888888899998887  34 66777 6778888888877766


Q ss_pred             HHHHHHHHhhh
Q psy10432        404 VALLASCVFKR  414 (440)
Q Consensus       404 ~~~~~~~~~~~  414 (440)
                      +..+......+
T Consensus       166 l~~~~~~~~~~  176 (433)
T PF03092_consen  166 LMLIVALFLLE  176 (433)
T ss_pred             HHHHHHHHhhh
Confidence            66555544444

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG1479|consensus

Probab=96.53  E-value=0.65  Score=42.94  Aligned_cols=106  Identities=15%  Similarity=0.093  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhH
Q psy10432        267 FMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYL  346 (440)
Q Consensus       267 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  346 (440)
                      +.+...+|.....++.++  ++|. +.+...+-.+.. -++.+...+........-+..+....++++..|-.......+
T Consensus       292 fN~~d~vG~~~a~~~~~~--~~r~-l~i~v~lR~lfi-PlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~  367 (406)
T KOG1479|consen  292 FNVFDLIGSILAALLTWP--DPRK-LTIPVLLRLLFI-PLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMY  367 (406)
T ss_pred             hHHHHHhhhhhhhcccCC--CCce-ehHHHHHHHHHH-HHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehh
Confidence            667778887777766543  3333 333333322222 222322211110000011123444455666667666777777


Q ss_pred             hccCCcchhhHHHHHHhhhhhhhHHHHHHH
Q psy10432        347 RGRIIPEKARATITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       347 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~  376 (440)
                      ..+.+|++++-.+-.+.......|...|..
T Consensus       368 aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~  397 (406)
T KOG1479|consen  368 APKQVKPSEKEAAGNLMVFFLVGGLALGSL  397 (406)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence            777777777666655555555555555554

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=96.49  E-value=0.024  Score=52.91  Aligned_cols=120  Identities=13%  Similarity=0.118  Sum_probs=83.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcch---hhHHHHHHhhhh
Q psy10432        290 TMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEK---ARATITNWLRVP  366 (440)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~  366 (440)
                      +.+.++.+...++.+++ .+...+.............+++.+..++.|..-|....+..|..+++   ++.+.+..+...
T Consensus         2 ktI~~g~~~~~~G~~ll-~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~   80 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLL-TLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG   80 (372)
T ss_dssp             HHHHHHHHHHHHHHHH---HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHh-HHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence            45666777777777664 33222222100001114677777888899999999999998888765   567788889999


Q ss_pred             hhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        367 TNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       367 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      .++|..+++...   +++.+ ..+|...|.++++..+++.+..+.-++
T Consensus        81 in~G~~~~~~~~---~~i~~-~~~~~~~f~i~~~~~~~~~~~f~~~~~  124 (372)
T PF00854_consen   81 INIGSLFSPTLV---PYIQQ-NYGWFLGFGIPAIGMLLALIVFLSGRK  124 (372)
T ss_dssp             HHHHHHHHHHCC---CHHHH-CS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HhhhhHhhcccc---hhhcc-ccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence            999999998833   66666 889999999999998888877665544

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=96.21  E-value=0.044  Score=46.95  Aligned_cols=96  Identities=11%  Similarity=0.044  Sum_probs=47.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHH---Hhh--cccCchhhHHHHHHHHHHHHHHHHHhcccc--CCCC-CccCCCC
Q psy10432        140 EWLNLTFARATFGSGLFAIVSGFTAHFF---ADI--LNLGPIAPFAVAIPFLLGSTLFIYFCWEEH--YDPK-TAKSSLL  211 (440)
Q Consensus       140 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~~--~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~-~~~~~~~  211 (440)
                      ++|+........+.++|.++.-..--.-   .+.  -.|  +..+.+.+.+..+.+++..++=+|-  ..++ +++++..
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W--~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~   79 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNW--QWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENS   79 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccc
Confidence            4555666666677777776643321111   111  246  7676666655554444333332221  1111 1111111


Q ss_pred             ccchhhhhhhhccCcchHHHHHHHHH
Q psy10432        212 PNSMFSSLKFLFTNPCLLTLGIVQSI  237 (440)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (440)
                      ..+..+..++.+|++..|...+....
T Consensus        80 ~~~~~~s~~~~LK~K~tw~w~~~Yg~  105 (267)
T PF07672_consen   80 TLSKKPSYKSILKEKETWKWILIYGI  105 (267)
T ss_pred             cccccchHHHHHccchHHHHHHHHHH
Confidence            12234577788999998886555433

>KOG0637|consensus

Probab=96.15  E-value=0.021  Score=52.86  Aligned_cols=141  Identities=10%  Similarity=0.025  Sum_probs=86.0

Q ss_pred             HHHHHhHHHHHHHhhhhhhh---ccCCchhhHHHHHHHHHHHHHHHHHHHHhh---ccCCchhHHHHH-HHHHHHHHHHH
Q psy10432        235 QSIYEGIMYTFIFVWTPVLE---VLSPPLGLVFSCFMISIMIGSKIYSILILK---YFKPETMLTLTV-YLATFSITVST  307 (440)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~~~~-~~~~~~~~~~~  307 (440)
                      .+-.+++...-..+.+|++.   ..+...+.+.....+..++.+++.|..+||   |+||||..+... ....++..++ 
T Consensus        41 a~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Li-  119 (498)
T KOG0637|consen   41 AAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLI-  119 (498)
T ss_pred             HHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhh-
Confidence            33334444444456777774   344777788888888889999999999998   788888755444 4444444333 


Q ss_pred             Hhhh------ccccch--hhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHH-HHHHhhhhhhhHHHHHHH
Q psy10432        308 VLTS------SLFDSR--RVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARAT-ITNWLRVPTNFITCFTLI  376 (440)
Q Consensus       308 ~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~-~~g~~~~~~~~g~~~~~~  376 (440)
                      .+..      ..+...  ..-.....++++.+.-+..........++..+...++++-+ +++.......+|+.+|-.
T Consensus       120 g~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~  197 (498)
T KOG0637|consen  120 GYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA  197 (498)
T ss_pred             hhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence            2211      111111  00011134455555555565566666777777766665555 888888888888877766

>PRK03612 spermidine synthase; Provisional

Probab=96.04  E-value=0.24  Score=48.25  Aligned_cols=142  Identities=11%  Similarity=0.075  Sum_probs=65.1

Q ss_pred             hhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH---HHHHHHhhhccccchhhcchhHHHH
Q psy10432        251 PVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFS---ITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       251 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      ++++..-...+.+.+.+..+..+|+.+.+++.++ . .++....-..+..++   ...+...... ......    ....
T Consensus        43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~-~~~~~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~----~~~~  115 (521)
T PRK03612         43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-A-AAGFVAVELLLALLGGLSALILYAAFAF-QGLSRL----LLYV  115 (521)
T ss_pred             HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH----HHHH
Confidence            3333333556777777778888888887776543 2 222222111111111   1111111110 000101    1222


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL  403 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (440)
                      ...+.++..|...|....+..+.. .++.|+..|-......+|+.+|..+. + -.+.. ..|......+.+.+.+
T Consensus       116 ~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~-~-~vLlp-~lG~~~t~~~~a~l~~  187 (521)
T PRK03612        116 LVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAF-P-FLLLP-RLGLIRTAALTGSLNL  187 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHH-H-HHHHH-hcchHHHHHHHHHHHH
Confidence            223456778888887776666542 22334445555556666666666533 1 11222 4454444444444433

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=95.95  E-value=1.2  Score=42.15  Aligned_cols=140  Identities=11%  Similarity=0.016  Sum_probs=75.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH----HHHHHHHhhhcccc----chhhcchhHHHHHH-H
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATF----SITVSTVLTSSLFD----SRRVLSTNLCFVAF-L  330 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~  330 (440)
                      .+..-..-.+..++.++..|++.|| ..|.+....+.+..-+    ++..+.........    .+..    ...+.. .
T Consensus        40 ~siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~----~~l~~~~~  114 (432)
T PF06963_consen   40 VSIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLF----IALFALLI  114 (432)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHH----HHHHHHHH
Confidence            3444455567778888999999997 8888877666544322    22222111111111    1111    111111 1


Q ss_pred             HHHHhhhchhh-----hHHhHhccCC--cchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHH
Q psy10432        331 IYEISVGMYCP-----VTGYLRGRII--PEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLL  403 (440)
Q Consensus       331 ~~~~~~g~~~~-----~~~~~~~~~~--p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (440)
                      +.+...-....     .-.-++....  +++...+.++..+-+-.....++|.++   |.+.+ ..++.....+.++..+
T Consensus       115 ~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~v---G~l~t-~~s~~~~~~~i~~~N~  190 (432)
T PF06963_consen  115 LLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFV---GLLMT-FASPVIAAIFIAGWNL  190 (432)
T ss_pred             HHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHH---HHHhh-ccCHHHHHHHHHHHHH
Confidence            11111111111     1111222222  455777788888888888999999966   66766 6777777777777777


Q ss_pred             HHHHH
Q psy10432        404 VALLA  408 (440)
Q Consensus       404 ~~~~~  408 (440)
                      ++...
T Consensus       191 ~S~~v  195 (432)
T PF06963_consen  191 ASVFV  195 (432)
T ss_pred             HHHHH
Confidence            76655

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PRK03612 spermidine synthase; Provisional

Probab=95.58  E-value=0.57  Score=45.74  Aligned_cols=60  Identities=18%  Similarity=0.088  Sum_probs=38.1

Q ss_pred             HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hccc
Q psy10432        107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFAD-ILNL  173 (440)
Q Consensus       107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw  173 (440)
                      ..-++.++..|...|.......      +. ..++-++..|.......+|.++|.++.+++.- .+|-
T Consensus       115 ~~~~~~~~l~G~~~Pl~~~~~~------~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~  175 (521)
T PRK03612        115 VLVLLIGLLIGMEIPLLMRILQ------RI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGL  175 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH------hc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence            3445567777777663322222      21 12235677888999999999999998877643 5553

>KOG3098|consensus

Probab=95.21  E-value=0.36  Score=45.71  Aligned_cols=116  Identities=16%  Similarity=0.234  Sum_probs=78.6

Q ss_pred             hcCCChhhHHHHHHHHHHHHhhhh-ccccccc---cccchhHHHHHHhHHHHHh-hhhcc------------------cc
Q psy10432         44 DYGYDEKNIALLYIAGFASSMIFG-IVVGSIA---DKFGRKLICISYGIVYTLC-CLTKF------------------SS  100 (440)
Q Consensus        44 ~~g~s~~~~~~~~~~~~~~~~l~~-~~~G~l~---Dr~Grr~~l~~~~~~~~~~-~~~~~------------------~~  100 (440)
                      ..+.+...+-.++.++...+.+.. .+.+.+.   +|+||++.+.++..+..++ ++.-.                  .+
T Consensus       272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~  351 (461)
T KOG3098|consen  272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP  351 (461)
T ss_pred             hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence            445555555446666666665543 4555555   5689999998888887776 33211                  12


Q ss_pred             hhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy10432        101 DFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHF  166 (440)
Q Consensus       101 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  166 (440)
                      ++...++.-++.|++.+......+..+.      +.. +++|.++.++...-..++..++-.....
T Consensus       352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~------~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~  410 (461)
T KOG3098|consen  352 SYYLALIIGFLLGFGDACFNTQRYVIIA------LLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY  410 (461)
T ss_pred             chhHHHHHHHHHhhHHHHHHHHHHHHHH------HHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            4556778889999999998776666665      777 7788899988888777777665544433

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=94.89  E-value=0.84  Score=42.49  Aligned_cols=69  Identities=10%  Similarity=0.133  Sum_probs=57.8

Q ss_pred             hcccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432         96 TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI  170 (440)
Q Consensus        96 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  170 (440)
                      .-+.++.|..++.-+..|+.+|..+......+.      |..++++|..++|..+.+.+.|..++..++-.+-..
T Consensus       329 ~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~------~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~~  397 (402)
T PF02487_consen  329 YRFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS------EEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEPW  397 (402)
T ss_pred             HHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH------hcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            445688999999999999999998665555555      889999999999999999999999999888766543

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=94.73  E-value=0.0061  Score=59.40  Aligned_cols=121  Identities=11%  Similarity=0.006  Sum_probs=1.1

Q ss_pred             hccCCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccch----------------
Q psy10432        254 EVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSR----------------  317 (440)
Q Consensus       254 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------  317 (440)
                      +....+.|++.+.+-++.++..++..++.+| ..|.|.+-.+.++.+++.++. .+.......+                
T Consensus        34 ~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~-~lPhf~~~~y~~~~~~~~~~~~~~~~  111 (539)
T PF03137_consen   34 GLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLF-ALPHFLSGPYSYEEASNSNGNSSISS  111 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHH-hccHhhcCCCcccccccccccccccc
Confidence            3334889999999999999999999999987 677777778888888877655 3311000000                


Q ss_pred             -------------------------hhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHH
Q psy10432        318 -------------------------RVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITC  372 (440)
Q Consensus       318 -------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~  372 (440)
                                               ........+++-.+.+++....++...++++|++++++.+...|+......+|-+
T Consensus       112 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa  191 (539)
T PF03137_consen  112 NLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA  191 (539)
T ss_dssp             ----------------------------------------SSS-------------------------------------
T ss_pred             ccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence                                     0000011222222333333447788899999999999999999998888877766


Q ss_pred             HHHH
Q psy10432        373 FTLI  376 (440)
Q Consensus       373 ~~~~  376 (440)
                      +|-.
T Consensus       192 ~Gf~  195 (539)
T PF03137_consen  192 LGFL  195 (539)
T ss_dssp             ----
T ss_pred             HHHH
Confidence            6654

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG3626|consensus

Probab=94.31  E-value=0.28  Score=48.98  Aligned_cols=155  Identities=14%  Similarity=0.060  Sum_probs=98.5

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhh---hcc-------------cc------
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLT---SSL-------------FD------  315 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------~~------  315 (440)
                      .+.|++...+-++..+......+...| ..|.+.+-.+.++++++.++. .+.   ..+             ..      
T Consensus       132 s~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgsll~-alPHf~~~~y~~~~~~~~~~~~~~~~~~s~  209 (735)
T KOG3626|consen  132 SQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGSLLF-ALPHFFSGPYEYELEVIKQSVENPSSSLSF  209 (735)
T ss_pred             CcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHHHHH-hChHHhcCcchhhhhhhhccccCCccccch
Confidence            678888888888888888888888886 777788888888888877665 331   000             00      


Q ss_pred             ----------------c----hhhc-chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHH
Q psy10432        316 ----------------S----RRVL-STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFT  374 (440)
Q Consensus       316 ----------------~----~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~  374 (440)
                                      .    .... .....+.+..+.+++....++...++++|.+.+++.....|+..++..+|=++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiG  289 (735)
T KOG3626|consen  210 CCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIG  289 (735)
T ss_pred             hhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHH
Confidence                            0    0000 001222333344444444788888999999999999999999888877776655


Q ss_pred             HHHh---hc-cccc--c-------Cc-c-chhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        375 LIFI---KN-EDAE--G-------GK-L-IAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       375 ~~~~---~~-~~~~--~-------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      -.+-   .. +...  .       |. + ..|...|++++.+.++..+..+.+++
T Consensus       290 fllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk  344 (735)
T KOG3626|consen  290 FLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK  344 (735)
T ss_pred             HHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            5421   00 0011  0       10 1 12556778888888888887777776

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=93.29  E-value=0.94  Score=40.26  Aligned_cols=109  Identities=18%  Similarity=0.253  Sum_probs=71.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432        259 PLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM  338 (440)
Q Consensus       259 ~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  338 (440)
                      ..++......+...++.+..|++.|| .|+|+.+..+......+.+.. .+...   ....    .........++..+.
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~----~~~~~~~~~g~~~~~  110 (338)
T COG0477          40 LYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLL-ALAPN---VGLA----LLLILRLLQGLGGGG  110 (338)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHH-HhCcc---chHH----HHHHHHHHHHhhhHH
Confidence            46788888888888888999999997 888866666655423332222 11111   1111    222332234556667


Q ss_pred             hhhhHHhHhccCCcc-hhhHHHHHHhhh-hhhhHHHHHHH
Q psy10432        339 YCPVTGYLRGRIIPE-KARATITNWLRV-PTNFITCFTLI  376 (440)
Q Consensus       339 ~~~~~~~~~~~~~p~-~~~g~~~g~~~~-~~~~g~~~~~~  376 (440)
                      ..+....+..+..|+ +.|+...+.... ....+..+++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (338)
T COG0477         111 LLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPL  150 (338)
T ss_pred             HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888999999887 678888888777 46667777764

>KOG1479|consensus

Probab=92.86  E-value=6  Score=36.84  Aligned_cols=86  Identities=10%  Similarity=0.145  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432        325 CFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLV  404 (440)
Q Consensus       325 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (440)
                      .+....+...+.+..+........+. |+|.....++-.+.++.+.+...-..-   ....|...+-..-|.+..+..++
T Consensus       120 t~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqavm~G~a~aG~l~Sl~~i~tk---a~~~~~~~sA~~yF~~s~~~~ll  195 (406)
T KOG1479|consen  120 TLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQAVMSGQALAGTLTSLLRILTK---AAFSDSRTSALIYFITSTVILLL  195 (406)
T ss_pred             HHHHHHHHhhhhhhhccchhhhhhcC-CHHHHHHHHhcchhHhHHHHHHHHHHH---HhcCCCCceeehhHHHHHHHHHH
Confidence            44444556666666777777777776 777766665544444444333322211   11122133444556666667777


Q ss_pred             HHHHHHHhhh
Q psy10432        405 ALLASCVFKR  414 (440)
Q Consensus       405 ~~~~~~~~~~  414 (440)
                      +.+.+..+++
T Consensus       196 C~i~y~~l~~  205 (406)
T KOG1479|consen  196 CFVLYLVLPK  205 (406)
T ss_pred             HHHHHHHhhc
Confidence            7777664443

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=91.41  E-value=6.3  Score=36.95  Aligned_cols=124  Identities=10%  Similarity=0.030  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhch---hhhHHhHhcc
Q psy10432        273 IGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMY---CPVTGYLRGR  349 (440)
Q Consensus       273 ~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~  349 (440)
                      ...+....+.|. .+.|..++...+...+...++.+ .        .     .+..+-+..+..|..   .....+++-.
T Consensus        56 ~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~-~--------~-----sv~~mq~~q~~yg~~~a~evay~sYiys  120 (412)
T PF01770_consen   56 AFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLF-G--------T-----SVLAMQLMQFFYGLATAAEVAYYSYIYS  120 (412)
T ss_pred             HHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHH-H--------C-----cHHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence            344566678895 88888888887776666555522 1        1     122222333344443   3345566666


Q ss_pred             CCcchhhHHHHHHhhhhhhhHHHHHHHHhhcc-ccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        350 IIPEKARATITNWLRVPTNFITCFTLIFIKNE-DAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       350 ~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      .+|+++--++.+..+...-.|..++..+  +- -...+ ..++.....+......++.++.+++++
T Consensus       121 ~v~~~~yq~vts~~raa~l~g~~~s~~l--gQllvs~~-~~sy~~L~~isl~~~~~a~~~~~fLP~  183 (412)
T PF01770_consen  121 VVDKEHYQKVTSYTRAATLVGRFISSLL--GQLLVSFG-GVSYFQLNYISLASVSLALLIALFLPM  183 (412)
T ss_pred             ecCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            7788887788877777766665555541  10 01113 556677767766666677777666655

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>KOG3574|consensus

Probab=91.31  E-value=12  Score=34.64  Aligned_cols=54  Identities=6%  Similarity=-0.059  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        325 CFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       325 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ..+.+.+..+....--.....+.-....+++.|-+........+.|.+++..++
T Consensus       136 lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if  189 (510)
T KOG3574|consen  136 LTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF  189 (510)
T ss_pred             HHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence            333444444444433334445555556777777777766677777777776544

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=90.35  E-value=1.9  Score=30.10  Aligned_cols=48  Identities=19%  Similarity=0.274  Sum_probs=40.5

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHH
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVS  306 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~  306 (440)
                      .+.|++.+.+.++.++|.+...++.++ .++++.+..+.+...+..+.+
T Consensus        27 ~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~m   74 (85)
T PF06779_consen   27 SQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAM   74 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999999885 777777888877777766555

Note that many members are hypothetical proteins.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=89.97  E-value=20  Score=34.83  Aligned_cols=37  Identities=8%  Similarity=-0.032  Sum_probs=33.1

Q ss_pred             hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        342 VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       342 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      ..+...+|..+.++..+.+++.....++|..++..+.
T Consensus       164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~  200 (491)
T PF03219_consen  164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLT  200 (491)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999888654

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=89.38  E-value=13  Score=35.48  Aligned_cols=89  Identities=10%  Similarity=0.079  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHh
Q psy10432        268 MISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLR  347 (440)
Q Consensus       268 ~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  347 (440)
                      .+..++.......+..| +..+.++..+.+...+..+....+.......+.  .....+....+.+++.+........+.
T Consensus        55 ~v~~l~~~~~~~~~~~~-i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~--~f~~~~~~v~~~g~~~~~~q~s~~gla  131 (437)
T TIGR00939        55 QLPSLLFNSLNLFLIFR-IPVTVRLLGGLVILLVVVILVMVLVKVQTSETG--FFVTTMASVVIINSGMALLQGSLFGLA  131 (437)
T ss_pred             HHHHHHHHHHHHHHhhc-cCccchhHHHHHHHHHHHHHHhheeeecCCcch--HHHHHHHHHHHHHhhhhhhcccchhhc
Confidence            34444555555566665 766666666655443333332122111111111  111344444556666777777777777


Q ss_pred             ccCCcchhhHHHH
Q psy10432        348 GRIIPEKARATIT  360 (440)
Q Consensus       348 ~~~~p~~~~g~~~  360 (440)
                      ... |++..+..+
T Consensus       132 ~~f-p~~~~~a~~  143 (437)
T TIGR00939       132 GVF-PSTYSSAVM  143 (437)
T ss_pred             ccC-CHHHHHHHH
Confidence            765 766544433

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=87.87  E-value=26  Score=33.58  Aligned_cols=119  Identities=8%  Similarity=-0.000  Sum_probs=67.7

Q ss_pred             CchhhHHHHHHH-HHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhc-------cccchh------hc-ch
Q psy10432        258 PPLGLVFSCFMI-SIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS-------LFDSRR------VL-ST  322 (440)
Q Consensus       258 ~~~g~~~~~~~~-~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~-~~  322 (440)
                      +....+-...-+ ++++...+..++.++ ..+++............++++ .+...       ++..+.      .| ..
T Consensus        61 e~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~fF~LF-a~Vi~P~~~~~hp~~~~~~~~~~~~p~~l  138 (509)
T COG3202          61 ESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLGFFALF-AFVIYPYKDILHPDPEFSRDLFADLPMFL  138 (509)
T ss_pred             hhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHH-HHHHhccccccCCCHHHHHHHHhhCCccc
Confidence            555555555555 667788889999996 888887665544443333332 22111       110000      00 00


Q ss_pred             hHHH-----HHHHHHHHh---hhc-hhh-hHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHh
Q psy10432        323 NLCF-----VAFLIYEIS---VGM-YCP-VTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFI  378 (440)
Q Consensus       323 ~~~~-----~~~~~~~~~---~g~-~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~  378 (440)
                      -..+     +...++..+   .|. ... ..+...+|....++..|.+++.+...+++..++..+.
T Consensus       139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~  204 (509)
T COG3202         139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT  204 (509)
T ss_pred             eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            0000     111111111   111 222 5677888998999999999999999999988888754

>KOG4830|consensus

Probab=82.10  E-value=0.23  Score=42.49  Aligned_cols=61  Identities=18%  Similarity=0.271  Sum_probs=42.5

Q ss_pred             HhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccc---------cccchhHHH-HHHhHHHHH
Q psy10432         32 WIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIA---------DKFGRKLIC-ISYGIVYTL   92 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~---------Dr~Grr~~l-~~~~~~~~~   92 (440)
                      +....++.-..++.|.++++...+...|.....+..|+.|...         ||+|||+.. .++.++..+
T Consensus        34 ScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~lVsl  104 (412)
T KOG4830|consen   34 SCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTVLVSL  104 (412)
T ss_pred             HHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccEEEEE
Confidence            3344455344478899998888888888888888888888655         499999874 334444444

>KOG1237|consensus

Probab=80.69  E-value=27  Score=34.72  Aligned_cols=148  Identities=10%  Similarity=0.006  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccc--------h----hhcc---hhHHHH
Q psy10432        263 VFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDS--------R----RVLS---TNLCFV  327 (440)
Q Consensus       263 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~---~~~~~~  327 (440)
                      ......-.........++++|-..+|-+.+.++..+..++..++......+...        .    ..+.   ......
T Consensus        78 ~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~  157 (571)
T KOG1237|consen   78 NVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYG  157 (571)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHH
Confidence            333444444556678888888756788888888877777755552221111100        0    0000   112333


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcc----hhhH--HHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPE----KARA--TITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTAC  401 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~----~~~g--~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (440)
                      ++.+...+.|..-|...+.-.+.+++    +.+.  .-+.......+.|..++..+.   -+..+ ..+|...|.+..++
T Consensus       158 ~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~---vyiq~-~~~w~lgf~i~~~~  233 (571)
T KOG1237|consen  158 ALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL---VYIQD-NVGWKLGFGIPTVL  233 (571)
T ss_pred             HHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH---Hhhhh-cccceeeccHHHHH
Confidence            44444556666788888888887772    2223  567777788888888887744   34445 67788888888887


Q ss_pred             HHHHHHHHHHhhh
Q psy10432        402 LLVALLASCVFKR  414 (440)
Q Consensus       402 ~~~~~~~~~~~~~  414 (440)
                      ..++.++.+...+
T Consensus       234 ~~lai~iF~~g~~  246 (571)
T KOG1237|consen  234 NALAILIFLPGFP  246 (571)
T ss_pred             HHHHHHHHHcCce
Confidence            7777766654433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	440
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2cfq_A	417	Lactose permease; transport, transport mechanism,	6e-05
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 55/412 (13%), Positives = 105/412 (25%), Gaps = 128/412 (31%)

Query: 94  CLTKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYL------FPVEWLNLTFA 147
            L +      +L+ G    G       SG ++W   +    Y       F + WLN    
Sbjct: 143 ALLELRPAKNVLIDG--VLG-------SG-KTWVALDVCLSYKVQCKMDFKIFWLN--LK 190

Query: 148 RATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGST---LFIYFCWEEH---- 200
                  +  ++            N    +  +  I   + S    L      + +    
Sbjct: 191 NCNSPETVLEMLQKLLYQI---DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 201 ------YDPKTAKSSLLPNSMFSSLKFLFTNPC--LLT---LGIVQSIYEGIMYTFIFV- 248
                  + K   +              F   C  LLT     +   +            
Sbjct: 248 LVLLNVQNAKAWNA--------------FNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 249 ----WTP--VLEVLS----------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETML 292
                TP  V  +L           P   L  +   +S +I   I           + + 
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS-IIAESI----------RDGLA 342

Query: 293 TLTVYLATFSITVSTVLTSSLFDSRRVLSTNL---CFVAFLIYEISVGMYCPVTGYLRGR 349
           T   +       ++T++ SSL     VL        F    ++  S              
Sbjct: 343 TWDNWKHVNCDKLTTIIESSL----NVLEPAEYRKMFDRLSVFPPSAH------------ 386

Query: 350 IIPEKARATITNWLRVPTNFITCFTLIFIK----NEDAEGGKLIAIHSVFVV--CTACLL 403
            IP    + I  W  V  + +        K     +  +    I+I S+++         
Sbjct: 387 -IPTILLSLI--WFDVIKSDVMVVVNKLHKYSLVEKQPKEST-ISIPSIYLELKVKLENE 442

Query: 404 VALLASCVFKRLYLSRKYSCESE-----------------KDLQMSQKDESF 438
            AL  S V     + + +  +                   K+++  ++   F
Sbjct: 443 YALHRSIV-DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 47/324 (14%), Positives = 99/324 (30%), Gaps = 86/324 (26%)

Query: 161 GFTAH----FFADILNLGP---------IAPFAVAIPFLLGSTLFIYFC-WE--EHYDPK 204
             T           L+  P           P  ++   ++  ++      W+  +H +  
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS---IIAESIRDGLATWDNWKHVNCD 353

Query: 205 TAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF---VWTP--VLEVLSPP 259
                 L   + SSL  L   P        + +++ +    +F      P  +L ++   
Sbjct: 354 K-----LTTIIESSLNVL--EPAEY-----RKMFDRL---SVFPPSAHIPTILLSLIW-- 396

Query: 260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLAT-FSITVSTVLTSSLFDSRR 318
             ++ S  M+ ++     YS L+ K  K  T+   ++YL     +     L  S+ D   
Sbjct: 397 FDVIKSDVMV-VVNKLHKYS-LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454

Query: 319 VLSTNLC------------FVAFLIYEIS-VGMYCPVTG----YLRGRIIPEKARATITN 361
           +                  F + + + +  +     +T     +L  R + +K R   T 
Sbjct: 455 IPK-TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513

Query: 362 W------------LRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409
           W            L+    +I         N+      + AI          L+ +    
Sbjct: 514 WNASGSILNTLQQLKFYKPYIC-------DNDPKYERLVNAILDFLPKIEENLICSKYTD 566

Query: 410 CVFKRLYLSRKYSC---ESEKDLQ 430
            +  R+ L  +      E+ K +Q
Sbjct: 567 LL--RIALMAEDEAIFEEAHKQVQ 588

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 44.2 bits (104), Expect = 6e-05
 Identities = 48/363 (13%), Positives = 100/363 (27%), Gaps = 28/363 (7%)

Query: 8   KTNMEFKRLQVRYFIPFFLATFSDWIQGPYVYKVYKDY-GYDEKNIALLYIAGFASSMIF 66
             N  F    + +F  FF      +   P+      D     + +  +++ A    S++F
Sbjct: 4   LKNTNFWMFGLFFFFYFF--IMGAYF--PFFPIWLHDINHISKSDTGIIFAAISLFSLLF 59

Query: 67  GIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGFE-- 124
             + G ++DK G +   +       +     F   F  LL   +  G     ++ GF   
Sbjct: 60  QPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFN 119

Query: 125 -SWYVNEHLNYYLFPVEWLNLTFARA--TFGSGLFAIVSGFTAHFFADILNLGPIAPFAV 181
                 E     +          AR     G  L A + G         +         +
Sbjct: 120 AGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALI 179

Query: 182 AIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLK---FLFTNPCLLTLGIVQSIY 238
               L  +                  S+          +     F +  ++ +     ++
Sbjct: 180 LAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVF 239

Query: 239 EGIMYTFIFVWTPVLEVLSPPLGLVFSCFMIS--IMIGSKIYSILILKYFKPETMLTLTV 296
           +     F   +    E  +   G V +   +    ++    ++ LI+     +  L L  
Sbjct: 240 DQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM---FFAPLIINRIGGKNALLLAG 296

Query: 297 YLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKAR 356
            + +  I  S+  TS+L             +   ++   V                 +  
Sbjct: 297 TIMSVRIIGSSFATSAL----------EVVILKTLHMFEVPFLLVGCFKYITSQFEVRFS 346

Query: 357 ATI 359
           ATI
Sbjct: 347 ATI 349

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 45/312 (14%), Positives = 99/312 (31%), Gaps = 65/312 (20%)

Query: 55  LYIAGFASSMIFGIVVGSIADKFGRK---LICISYGIVYTLCCLTKFSSDFYILLYGRLF 111
            Y+  +  S +F    G I+D+ GR+   L+ +S  ++ TL  +   +S   +L+     
Sbjct: 43  AYLLTYGVSQLF---YGPISDRVGRRPVILVGMSIFMLATLVAV--TTSSLTVLIAASAM 97

Query: 112 GGIATSI-----------LFSGFESWYVNEHLNYYLFPVEWLNLTFARA-----TFGSGL 155
            G+ T +           L+   +  + N            LN+    +       G GL
Sbjct: 98  QGMGTGVGGVMARTLPRDLYERTQLRHANSL----------LNMGILVSPLLAPLIG-GL 146

Query: 156 FAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSM 215
              +  + A +         +      + F +   +           P+T         +
Sbjct: 147 LDTMWNWRACYLF-------LLVLCAGVTFSMARWM-----------PETRPVDAPRTRL 188

Query: 216 FSSLKFLFTNPCLLTLGIVQSIYEGIMYTFI----FVWTPVLEVLSPPLGLVFSCFMISI 271
            +S K LF N       ++       +  F      +   VL + S  + ++F   + + 
Sbjct: 189 LTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAA 248

Query: 272 MIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLI 331
             G+        ++    T++  +V     +  +  +       +   L      V   +
Sbjct: 249 FFGAWFAGRPNKRF---STLMWQSVICCLLAGLLMWIPDWFGVMNVWTL-----LVPAAL 300

Query: 332 YEISVGMYCPVT 343
           +    GM  P+ 
Sbjct: 301 FFFGAGMLFPLA 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	440
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	100.0
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.98
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.97
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.96
2xut_A	524	Proton/peptide symporter family protein; transport	99.95
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.42
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.34
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.26
2xut_A	524	Proton/peptide symporter family protein; transport	99.23
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.22
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.17
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.04

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=3.4e-36  Score=287.30  Aligned_cols=362  Identities=8%  Similarity=0.004  Sum_probs=279.1

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc----cchhHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF----SSDFYIL  105 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~----~~~~~~l  105 (440)
                      .....+.+|.+.+++ .+..+++++.++..+...+.++++|+++||+|||++++.+.++.+++ .++++    +++++.+
T Consensus        44 ~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  122 (451)
T 1pw4_A           44 RKNFALAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVM  122 (451)
T ss_dssp             HTSHHHHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHH
T ss_pred             HHHHHHHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHH
Confidence            445677787778899 99999999888888888888889999999999999999999999998 67888    8999999


Q ss_pred             HHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchhhHHHHHH
Q psy10432        106 LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILN-LGPIAPFAVAIP  184 (440)
Q Consensus       106 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~~~~~~~~~  184 (440)
                      +++|+++|++.+...+...+++.      |++|+++|++++++.+.+.++|.++||.+++.+.+..| |  |+.|++.++
T Consensus       123 ~~~~~l~G~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w--~~~f~~~~~  194 (451)
T 1pw4_A          123 FVLLFLCGWFQGMGWPPCGRTMV------HWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDW--HAALYMPAF  194 (451)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHH------TTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCS--TTCTHHHHH
T ss_pred             HHHHHHHHHHhhhccchHHHHHH------HHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHH
Confidence            99999999999999888777777      99999999999999999999999999999999988888 9  778887777


Q ss_pred             HHHHHHHHHHHhccccCCCCCccCCCC---------------ccchhh-hhhhhccCcchHHHHHHHHHHHhHHHHHHHh
Q psy10432        185 FLLGSTLFIYFCWEEHYDPKTAKSSLL---------------PNSMFS-SLKFLFTNPCLLTLGIVQSIYEGIMYTFIFV  248 (440)
Q Consensus       185 ~~~~~~~~~~~~~~e~~~~~~~~~~~~---------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (440)
                      ..++..++.++.+||++++.+.+++++               ..+.++ ..++.+++|.++...+..++.....+.....
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (451)
T 1pw4_A          195 CAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDW  274 (451)
T ss_dssp             HHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCCHhhcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            766666666667788665322111000               001111 1466788899988888877777776666554


Q ss_pred             hhhhhhc-cC---CchhhHHHHHHHHHHHHHHHHHHHHhhcc--CCchhHHHHHHHHH-HHHHHHHHhhhccccchhhcc
Q psy10432        249 WTPVLEV-LS---PPLGLVFSCFMISIMIGSKIYSILILKYF--KPETMLTLTVYLAT-FSITVSTVLTSSLFDSRRVLS  321 (440)
Q Consensus       249 ~~~~~~~-~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  321 (440)
                      .+.+++. .+   .+.+...+...++.+++.++.+++.|| +  ++|+.+..+..+.. ++.+.+ ...  +.....   
T Consensus       275 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~---  347 (451)
T 1pw4_A          275 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVY-WMN--PAGNPT---  347 (451)
T ss_dssp             HHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTTCHHHHHHHHHHHHHHHHHHT-TSC--CTTCHH---
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCchhHHHHHHHHHHHHHHHH-HHh--cccCHH---
Confidence            4444433 34   567888999999999999999999997 8  88887776665555 333222 211  111111   


Q ss_pred             hhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhh-HHHHHHHHhhccccccCccchhhHHHHHHHH
Q psy10432        322 TNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNF-ITCFTLIFIKNEDAEGGKLIAIHSVFVVCTA  400 (440)
Q Consensus       322 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (440)
                        .......+.+++.+...+....+..+..|+++||++.|+.+...++ +..++|.+.   +.+.+ ..+++..|.+.++
T Consensus       348 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~---g~l~~-~~g~~~~~~~~~~  421 (451)
T 1pw4_A          348 --VDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV---GYTVD-FFGWDGGFMVMIG  421 (451)
T ss_dssp             --HHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-SSCSHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHH---HHHHH-hcCcHHHHHHHHH
Confidence              2344444555566667777888999999999999999999999999 999999954   66777 7788999999888


Q ss_pred             HHHHHHHHHHHhhh
Q psy10432        401 CLLVALLASCVFKR  414 (440)
Q Consensus       401 ~~~~~~~~~~~~~~  414 (440)
                      +.+++.++....++
T Consensus       422 ~~~~~~~~~~~~~~  435 (451)
T 1pw4_A          422 GSILAVILLIVVMI  435 (451)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            88887776665544

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=4.3e-34  Score=271.72  Aligned_cols=348  Identities=14%  Similarity=0.100  Sum_probs=268.0

Q ss_pred             HHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh---cccchhHHHH
Q psy10432         31 DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT---KFSSDFYILL  106 (440)
Q Consensus        31 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~---~~~~~~~~l~  106 (440)
                      .....+..|.+.+++|.|+.+++++.++..+...+..+++|+++||+|||++++.+.++.+++ .++   .++++++.++
T Consensus        42 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  121 (438)
T 3o7q_A           42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFL  121 (438)
T ss_dssp             HHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence            466778888888999999999999888888888888899999999999999999999999998 666   7889999999


Q ss_pred             HHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hhcc-------------
Q psy10432        107 YGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFA-DILN-------------  172 (440)
Q Consensus       107 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~g-------------  172 (440)
                      ++|++.|++.+...+...+++.      |++|+|+|++++++.+...++|.+++|.+++.+. +..+             
T Consensus       122 ~~~~l~G~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~  195 (438)
T 3o7q_A          122 VGLFIIAAGLGCLETAANPFVT------VLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPE  195 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH------HSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHH
T ss_pred             HHHHHHHhhHHHhhhhHHHHHH------HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcc
Confidence            9999999999999887777777      9999999999999999999999999999999998 5443             


Q ss_pred             ------------cCchhhHHHHHHHHHHHHHHHHH-hccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHH
Q psy10432        173 ------------LGPIAPFAVAIPFLLGSTLFIYF-CWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYE  239 (440)
Q Consensus       173 ------------w~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (440)
                                  |  |+.|++.+....+..++..+ ..||++++++++  ++.++.++++++++++|.++...+..++..
T Consensus       196 ~~~~~~~~~~~~w--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (438)
T 3o7q_A          196 QLSAYKHSLVLSV--QTPYMIIVAIVLLVALLIMLTKFPALQSDNHSD--AKQGSFSASLSRLARIRHWRWAVLAQFCYV  271 (438)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCCCCTTTCCCC--SSTTSHHHHHHHHTTCSHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhH--HHHHHHHHHHHHHHHHHHHHHcCCccccccccc--ccccchhhhHHHHHhChHHHHHHHHHHHHH
Confidence                        5  88886666555544443332 234443322121  133445667888999999998888777777


Q ss_pred             hHHHHHHHhhhhh-h-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccc
Q psy10432        240 GIMYTFIFVWTPV-L-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLF  314 (440)
Q Consensus       240 ~~~~~~~~~~~~~-~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (440)
                      ..........+++ + +..+   .+.+.......++.+++.++.+++.|| +++|+.+..+..+..++.+.+ .+.  +.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~-~~~--~~  347 (438)
T 3o7q_A          272 GAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALCLIS-AFA--GG  347 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHH-HHC--CH
T ss_pred             HHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHH-HHc--CC
Confidence            6666665555555 4 2223   667888889999999999999999998 999998888877776665444 211  11


Q ss_pred             cchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccch-hhH
Q psy10432        315 DSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIA-IHS  393 (440)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~  393 (440)
                        .      ...+.+.+.+++.+...|...++..+..|++ ++++.++.. ...++..++|.+.   +.+.+ ..+ ++.
T Consensus       348 --~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~---g~l~~-~~g~~~~  413 (438)
T 3o7q_A          348 --H------VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVM---GFVSD-AAGNIPT  413 (438)
T ss_dssp             --H------HHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHH---HHHHH-HHTSSGG
T ss_pred             --c------HHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHH---HHHHH-HhcchHH
Confidence              1      1233334556677888898899988888866 888888777 6679999999955   66777 666 888


Q ss_pred             HHHHHHHHHHHHH
Q psy10432        394 VFVVCTACLLVAL  406 (440)
Q Consensus       394 ~~~~~~~~~~~~~  406 (440)
                      .|.+.+++.++..
T Consensus       414 ~~~~~~~~~~~~~  426 (438)
T 3o7q_A          414 AELIPALCFAVIF  426 (438)
T ss_dssp             GGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            8887665554443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=100.00  E-value=2.1e-30  Score=249.97  Aligned_cols=349  Identities=14%  Similarity=0.097  Sum_probs=237.9

Q ss_pred             cCCChhhHHHHHHHHHHHHhhhhccccccccc-cchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccc
Q psy10432         45 YGYDEKNIALLYIAGFASSMIFGIVVGSIADK-FGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSG  122 (440)
Q Consensus        45 ~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~  122 (440)
                      +|.|..+.+++.++..+...+.+++.|+++|| +|||+++..+.++.+++ .++++++|++.++++|+++|++.+...+.
T Consensus        49 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  128 (491)
T 4aps_A           49 LHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPN  128 (491)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccch
Confidence            99999999998888888777778899999999 89999999999999998 78889999999999999999999999888


Q ss_pred             cchhhhccccccccccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhcccc
Q psy10432        123 FESWYVNEHLNYYLFPVEW--LNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEH  200 (440)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~  200 (440)
                      ..+++.      |++|+++  |++++++.+...++|..+||.+++.+.+..||  ++.|.+.+...++..+...+..|+.
T Consensus       129 ~~~~~~------~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~--~~~f~~~~~~~~~~~~~~~~~~~~~  200 (491)
T 4aps_A          129 VSTLVG------TLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGY--HVAFSLAAIGMFIGLLVYYFGGKKT  200 (491)
T ss_dssp             HHHHHH------HHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH--HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHH------HHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHhCccc
Confidence            777777      9999988  77888889999999999999999999999899  8888887666555444443333332


Q ss_pred             CCCCCc-c-CCCCccchhhhh------------------------------------------------hh-----hccC
Q psy10432        201 YDPKTA-K-SSLLPNSMFSSL------------------------------------------------KF-----LFTN  225 (440)
Q Consensus       201 ~~~~~~-~-~~~~~~~~~~~~------------------------------------------------~~-----~~~~  225 (440)
                      .+++++ + ++.+.++..+..                                                +.     ..++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (491)
T 4aps_A          201 LDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHL  280 (491)
T ss_dssp             CCSCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred             ccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHH
Confidence            221111 1 000111111100                                                00     0111


Q ss_pred             --cchHHHHHHHHHHHhHHHHHHHhhhhhh--hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHH-----
Q psy10432        226 --PCLLTLGIVQSIYEGIMYTFIFVWTPVL--EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLT-----  293 (440)
Q Consensus       226 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~-----  293 (440)
                        ...+...+...+........ ....+.+  +..+   ...+.......++.+++.++.+++.|| +++|+...     
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r-~~~r~~~~~~~~~  358 (491)
T 4aps_A          281 RVVSYIPLFIAAVLFWAIEEQG-SVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTA-WKKNQPSSPTKFA  358 (491)
T ss_dssp             -CTTHHHHHHHHHHHHHHHGGG-GTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHH-TTTC---CHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhc-cHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHH-HhccCCCchHHHH
Confidence              11222232332222222222 2222333  2222   567888888899999999999999998 98876543     


Q ss_pred             HHHHHHHHHHHHHHHhhh-----ccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhh
Q psy10432        294 LTVYLATFSITVSTVLTS-----SLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTN  368 (440)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  368 (440)
                      .+..+..++...+ ....     .......     .......+.+++.+...+....+..|..|++.||++.|+.+...+
T Consensus       359 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  432 (491)
T 4aps_A          359 VGLMFAGLSFLLM-AIPGALYGTSGKVSPL-----WLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSS  432 (491)
T ss_dssp             HHHHHHHHHHTTT-HHHHHHCCCCTTCCTH-----HHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHHHhcCCCCCccHH-----HHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            4444444443333 1111     0011111     244555566677777888889999999999999999999999999


Q ss_pred             hHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy10432        369 FITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFKR  414 (440)
Q Consensus       369 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (440)
                      +|..+++.+.   +...+  .++...|...+++.+++.++.+...+
T Consensus       433 ~g~~i~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (491)
T 4aps_A          433 VGSALNAQLV---TLYNA--KSEVAYFSYFGLGSVVLGIVLVFLSK  473 (491)
T ss_dssp             HHHHHHHHHG---GGGGG--SSTTHHHHHTHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHH---HHHhc--ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999844   44444  25667777777777766666555444

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.98  E-value=5.3e-33  Score=258.68  Aligned_cols=348  Identities=12%  Similarity=0.054  Sum_probs=262.1

Q ss_pred             HHHHHHHHhhhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhH
Q psy10432         25 FLATFSDWIQGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFY  103 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~  103 (440)
                      +..........+..|.+.+++|.|+++.+++.++......+.+++.|+++||+|||+++..+..+.+++ .+..++++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~   89 (375)
T 2gfp_A           10 AVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLT   89 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHH
Confidence            344445667788888888999999999999888888888888899999999999999999999999998 6788889999


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAI  183 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~  183 (440)
                      .+++.|+++|++.+...+...+++.      |+.|+|+|++++++.+...++|..++|.+++.+.+..||  |..+.+.+
T Consensus        90 ~l~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~~~~  161 (375)
T 2gfp_A           90 VLIAASAMQGMGTGVGGVMARTLPR------DLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNW--RACYLFLL  161 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHH--HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccH--HHHHHHHH
Confidence            9999999999999999887777777      999999999999999999999999999999999998899  88888777


Q ss_pred             HHHHHHHHHHHHhccccCCCCCccCCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhhhc-cC---Cc
Q psy10432        184 PFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVLEV-LS---PP  259 (440)
Q Consensus       184 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~  259 (440)
                      ...++..+...+.+||++++++++     ++.++++++++|+|+++...+...+.......+....++++++ .+   .+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  236 (375)
T 2gfp_A          162 VLCAGVTFSMARWMPETRPVDAPR-----TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMT  236 (375)
T ss_dssp             HHHHHHHCCCCCSSCCCSTTTCCC-----CCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCcccCCCCccc-----ccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence            766655554555677765543322     1223456778888988888777777777766665544444432 33   67


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHH-HHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc
Q psy10432        260 LGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYL-ATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM  338 (440)
Q Consensus       260 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  338 (440)
                      .+.......++.+++.++.+++.|| .++  ....+... ...+...+ ........ ...    .......+.+++.+.
T Consensus       237 ~g~~~~~~~~~~~~~~~~~~~l~~r-~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~----~~~~~~~l~g~~~~~  307 (375)
T 2gfp_A          237 VSILFILPIPAAFFGAWFAGRPNKR-FST--LMWQSVICCLLAGLLMW-IPDWFGVM-NVW----TLLVPAALFFFGAGM  307 (375)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHTTTTH-HHH--HHHHHHHHHHHTSSSSS-HHHHHHHH-HHH----HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHH-HHhhhccc-cHH----HHHHHHHHHHHHHHH
Confidence            7888899999999999999999997 665  22333222 11111110 10000000 111    233445566677788


Q ss_pred             hhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHH
Q psy10432        339 YCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCT  399 (440)
Q Consensus       339 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (440)
                      ..+.......|..| ++||++.|+.+...+++..++|.+.   +.+.+ ..++...+...+
T Consensus       308 ~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~-~~~~~~~~~~~~  363 (375)
T 2gfp_A          308 LFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLS---AMLPQ-TGQGSLGLLMTL  363 (375)
T ss_dssp             TSSTTHHHHHTHHH-HHHHHHHHHHHHHHHHHHHCCSTTC---THHHH-HHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCC-cccchHHHHHHHHHHHHHHHHHHHH---HHHhc-CCcccHHHHHHH
Confidence            88988999999988 8999999999999999999999843   55555 556666666543

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.97  E-value=3.1e-29  Score=241.82  Aligned_cols=376  Identities=11%  Similarity=0.024  Sum_probs=235.9

Q ss_pred             HhhhhhHhhhHhhcCC--------ChhhHHHH---HHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhc--
Q psy10432         32 WIQGPYVYKVYKDYGY--------DEKNIALL---YIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTK--   97 (440)
Q Consensus        32 ~~~~~~~~~~~~~~g~--------s~~~~~~~---~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~--   97 (440)
                      +..+..++.+.++++.        +.++.|++   +.++..++.   +++|+++||+|||++++++.+++.++ ++++  
T Consensus        29 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~---~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~  105 (491)
T 4gc0_A           29 AVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGG---ALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWP  105 (491)
T ss_dssp             HGGGGTHHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHH---HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            3455666666655532        23344554   444444444   59999999999999999999999988 6655  


Q ss_pred             ----------------ccchhHHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHH
Q psy10432         98 ----------------FSSDFYILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSG  161 (440)
Q Consensus        98 ----------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~  161 (440)
                                      +++|+++++++|+++|++.|...+...+++.      |+.|+++|++..+..+.+...|.++++
T Consensus       106 ~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~------E~~p~~~rg~~~~~~~~~~~~g~~~~~  179 (491)
T 4gc0_A          106 ELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIA------ELAPAHIRGKLVSFNQFAIIFGQLLVY  179 (491)
T ss_dssp             TTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH------TTSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH------hhCCHHhhhhhHHhhhhhhhhhhhhhh
Confidence                            4789999999999999999999887777777      999999999999999999999999999


Q ss_pred             HHHHHHHhhcc------cCchhhHHHHHHHHHHHHHHHHHhccccCCC----CCccCC--------------CCc---c-
Q psy10432        162 FTAHFFADILN------LGPIAPFAVAIPFLLGSTLFIYFCWEEHYDP----KTAKSS--------------LLP---N-  213 (440)
Q Consensus       162 ~~~~~l~~~~g------w~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~--------------~~~---~-  213 (440)
                      .++..+....+      |.||..+.......++ .+...+..||+|+.    .++++.              ++.   + 
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  258 (491)
T 4gc0_A          180 CVNYFIARSGDASWLNTDGWRYMFASECIPALL-FLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKH  258 (491)
T ss_dssp             HHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHH-HHHHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcchhhccccccccccchhhHHHhhhhhhhhhh-hhhhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHH
Confidence            98887765432      1236666555555443 33445567888641    000000              000   0 


Q ss_pred             ---chh--hhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhh
Q psy10432        214 ---SMF--SSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILK  284 (440)
Q Consensus       214 ---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r  284 (440)
                         ..+  ......++.++.........+.+.........+.+.+ +..+   ..........++..+++.++.+++.||
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr  338 (491)
T 4gc0_A          259 SLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK  338 (491)
T ss_dssp             HHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence               000  0011122333333333333333332222223344444 3332   334455566778888999999999998


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhc-hhhhHHhHhccCCcchhhHHHHHHh
Q psy10432        285 YFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGM-YCPVTGYLRGRIIPEKARATITNWL  363 (440)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~g~~~g~~  363 (440)
                       +|||+.+..+.....++.+.+..........+.      .+....++..+.+. ..|..+.+..|.+|++.|+++.|+.
T Consensus       339 -~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~  411 (491)
T 4gc0_A          339 -FGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV------ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIA  411 (491)
T ss_dssp             -HCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH------HHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHH
T ss_pred             -hcCcchhccchHHHHHHHHHHHHHHhcccchHH------HHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence             999999988888777766555222222221121      22222222222332 4567788999999999999999999


Q ss_pred             hhhhhhHHHHHHHHhhcc---ccccCccchhhHHHHHHHHHHHHHHHHHH-Hhhhhhcccccchhhhhhh
Q psy10432        364 RVPTNFITCFTLIFIKNE---DAEGGKLIAIHSVFVVCTACLLVALLASC-VFKRLYLSRKYSCESEKDL  429 (440)
Q Consensus       364 ~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  429 (440)
                      +...++++.+++..+...   ..... ..+....|.+.+++++++.++.+ ++++    .|.++-+|.++
T Consensus       412 ~~~~~~~~~i~~~~~p~l~~~~~~~~-~~~~~~~~~i~~~~~~~~~i~~~~~~PE----Tkg~tLeei~~  476 (491)
T 4gc0_A          412 VAAQWLANYFVSWTFPMMDKNSWLVA-HFHNGFSYWIYGCMGVLAALFMWKFVPE----TKGKTLEELEA  476 (491)
T ss_dssp             HHHHHHHHHHHHTHHHHHCHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHCCC----CTTCCHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHHHheecC----CCCCCHHHHHH
Confidence            999999998887643110   00111 23445667777777777666554 4455    44444444443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.96  E-value=1.1e-28  Score=232.62  Aligned_cols=363  Identities=14%  Similarity=0.048  Sum_probs=228.1

Q ss_pred             HHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-h---hhccc
Q psy10432         25 FLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-C---LTKFS   99 (440)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~---~~~~~   99 (440)
                      +....+.....+++|... +++|.|+.++|++.+.......+.+|++|+++||+||||+++.+..+.++. .   ...+.
T Consensus        17 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~   96 (417)
T 2cfq_A           17 FFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFG   96 (417)
T ss_dssp             HHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444455667776644 568999999999888888888888899999999999999999888776653 1   11222


Q ss_pred             chhH-HHHHHHHHHHHHHhhhccccchhhhccccccccccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q psy10432        100 SDFY-ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV--EWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPI  176 (440)
Q Consensus       100 ~~~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~  176 (440)
                      +... .++..+.+.|++.+...+...+...      ++.++  ++++...+......++|..++|.+++++.+. +|  +
T Consensus        97 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~~-~~--~  167 (417)
T 2cfq_A           97 PLLQYNILVGSIVGGIYLGFCFNAGAPAVE------AFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NN--Q  167 (417)
T ss_dssp             HHHHTTCCHHHHGGGSSTTHHHHTTHHHHH------HHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHHH-CS--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHH------HHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh-ch--h
Confidence            2211 1334555555544443333222222      33333  3556677888888999999999999999874 77  7


Q ss_pred             hhHHHHHHHHHHHHHHHHHhccccCCCCC-cc--CCCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh
Q psy10432        177 APFAVAIPFLLGSTLFIYFCWEEHYDPKT-AK--SSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL  253 (440)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (440)
                      ..|++.+...++..+...+..||++++.+ ++  ++++.+...+++++++++|+++...+..+........+.. +.|.+
T Consensus       168 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  246 (417)
T 2cfq_A          168 FVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQ-QFANF  246 (417)
T ss_dssp             HHHTTTTTTTTTHHHHSCSSCCCCSCSSCSSSSSSSCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcccccccccccccccccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHH-HHHHH
Confidence            77776655543333332223334322111 10  0001111223456778888887765554443333333322 23332


Q ss_pred             --hccC------CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        254 --EVLS------PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       254 --~~~~------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                        +..+      ...+.......++.+++.++.+++.|| +++|+.+..+..+.++..+.+ ..  .. ..+      ..
T Consensus       247 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~l~~~~~~~~~~~~~~-~~--~~-~~~------~~  315 (417)
T 2cfq_A          247 FTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINR-IGGKNALLLAGTIMSVRIIGS-SF--AT-SAL------EV  315 (417)
T ss_dssp             HHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHH-TT--CC-SHH------HH
T ss_pred             HHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHH-HH--hc-cHH------HH
Confidence              2121      334667777778888999999999998 999998877776665544333 21  11 111      12


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH-hhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW-LRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLV  404 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (440)
                      .....+..++.+...+....+..|..|++.||++.+. .+...++|+.++|.+.   |.+.+ ..+++..|.+.+++.++
T Consensus       316 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~---G~l~~-~~g~~~~f~~~~~~~l~  391 (417)
T 2cfq_A          316 VILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLA---GNMYE-SIGFQGAYLVLGLVALG  391 (417)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHH---HTHHH-HSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhH---HHHHH-hcCcHHHHHHHHHHHHH
Confidence            2222233344455556667889999999999999998 4888889999999954   66767 67888888888887777


Q ss_pred             HHHHHHHh
Q psy10432        405 ALLASCVF  412 (440)
Q Consensus       405 ~~~~~~~~  412 (440)
                      +.+..+..
T Consensus       392 ~~~~~~~~  399 (417)
T 2cfq_A          392 FTLISVFT  399 (417)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHHhh
Confidence            76655443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.95  E-value=1e-26  Score=225.98  Aligned_cols=362  Identities=7%  Similarity=0.026  Sum_probs=220.3

Q ss_pred             hhhhhHhhh-HhhcC------CChhhHHHHHHHHHHHHhhhhcccccccccc-chhHHHHHHhHHHHHh-hhhcccc-hh
Q psy10432         33 IQGPYVYKV-YKDYG------YDEKNIALLYIAGFASSMIFGIVVGSIADKF-GRKLICISYGIVYTLC-CLTKFSS-DF  102 (440)
Q Consensus        33 ~~~~~~~~~-~~~~g------~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~-~~~~~~~-~~  102 (440)
                      ...+.++.. .+++|      .++.+.+++.++......+..++.|+++||+ |||+++..+.++.+++ .+..+++ ++
T Consensus        30 ~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~  109 (524)
T 2xut_A           30 GMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSV  109 (524)
T ss_dssp             HHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCH
T ss_pred             HHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccH
Confidence            344555443 36788      9999999988888877777778999999999 9999999999999998 6778888 99


Q ss_pred             HHHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHH---HHHHHHHHHHHHHHHHHHHHhhcccCchhhH
Q psy10432        103 YILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFAR---ATFGSGLFAIVSGFTAHFFADILNLGPIAPF  179 (440)
Q Consensus       103 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~  179 (440)
                      +.+++.|++.|++.+...|...+++.      |++|+++|+++.+.   .+...++|..+||.+++.+.+..||  +..|
T Consensus       110 ~~~~~~~~l~g~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~--~~~f  181 (524)
T 2xut_A          110 QGFYTGLFLIALGSGGIKPLVSSFMG------DQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGA--AVAF  181 (524)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHH------HTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCH--HHHH
T ss_pred             HHHHHHHHHHHHhccccchhHHHHHH------HHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH--HHHH
Confidence            99999999999999999888777777      99999999776655   8999999999999999999998898  8888


Q ss_pred             HHHHHHHHHHHHHHHHhccccCCCCCccCC--CC----------cc---ch-----------------------------
Q psy10432        180 AVAIPFLLGSTLFIYFCWEEHYDPKTAKSS--LL----------PN---SM-----------------------------  215 (440)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~----------~~---~~-----------------------------  215 (440)
                      .+.+...++..+...+..|+.+++++++++  ..          .+   +.                             
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (524)
T 2xut_A          182 GIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGL  261 (524)
T ss_dssp             HHHHHHHHHHHHHHHSSSSSCCCCC--------------------CTTHHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHhhhhcccCccchhhhhhhhhhhhhhhcccchhhhhhhh
Confidence            877766554444333222221111100000  00          00   00                             


Q ss_pred             ------------hhhhh------------hhccCcchHHHHHHHHHHHhHHHHHHHhhhhhh----hccCC----chhhH
Q psy10432        216 ------------FSSLK------------FLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPVL----EVLSP----PLGLV  263 (440)
Q Consensus       216 ------------~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~g~~  263 (440)
                                  .++++            ...+.++.+... .........+.....+.+.+    ...+.    ..+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (524)
T 2xut_A          262 CCAMVLVMGFVGAGASLQLERARKSHPDAAVDGVRSVLRIL-VLFALVTPFWSLFDQKASTWILQANDMVKPQWFEPAMM  340 (524)
T ss_dssp             HHHHHHHHHHHHTGGGTHHHHSCCSCCSSSSTTTTTHHHHH-HHHTTSHHHHTTTSSTTTHHHHHHHHSCCCSSSCHHHH
T ss_pred             hhhhhhhhcccccchhhHHhhhhccccHhHHHHHHHHHHHH-HHHHHHHHHHHHHhccchhhHHhHHhcCCCeeecHHHH
Confidence                        00000            001112222111 11111111111111112222    11121    35555


Q ss_pred             HHHHHHHHHHHHHHHHHHH----hhccCC----chhHHHHHHHHHHHHHHHHHhhhc-----cccchhhcchhHHHHHHH
Q psy10432        264 FSCFMISIMIGSKIYSILI----LKYFKP----ETMLTLTVYLATFSITVSTVLTSS-----LFDSRRVLSTNLCFVAFL  330 (440)
Q Consensus       264 ~~~~~~~~~~~~~~~g~l~----~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  330 (440)
                      .....++.+++.++.+++.    || .++    ++.+..+..+..++.+.+ .....     ......     .......
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~  413 (524)
T 2xut_A          341 QALNPLLVMLLIPFNNFVLYPAIER-MGVKLTALRKMGAGIAITGLSWIVV-GTIQLMMDGGSALSIF-----WQILPYA  413 (524)
T ss_dssp             HTTSGGGHHHHGGGTTTC-------------CCHHHHHTHHHHHHHHHHTT-TTTTTTTTTTCCCCSH-----HHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHhhhHHHHHh-cCCCCChHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcCHH-----HHHHHHH
Confidence            5555556666666665543    43 322    234445555554444333 21110     001111     2444555


Q ss_pred             HHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCcc---------chh-hHHHHHHHH
Q psy10432        331 IYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKL---------IAI-HSVFVVCTA  400 (440)
Q Consensus       331 ~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~  400 (440)
                      +.+++.+...+....+..+..|++.||+++|+.+...++|..++|.+.   +.+.+..         .+. ...|.+.++
T Consensus       414 l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (524)
T 2xut_A          414 LLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLAN---VSVKSPTVTEQIVQTGMSVTAFQMFFFAG  490 (524)
T ss_dssp             HHHHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHH---HHTTSCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHH---HHhcccccccccccccccccccHHHHHHH
Confidence            667777888898999999999999999999999999999999999855   4454411         011 223666666


Q ss_pred             HHHHHHHHHHHhh
Q psy10432        401 CLLVALLASCVFK  413 (440)
Q Consensus       401 ~~~~~~~~~~~~~  413 (440)
                      +.+++.++.+...
T Consensus       491 ~~~~~~~~~~~~~  503 (524)
T 2xut_A          491 FAILAAIVFALYA  503 (524)
T ss_dssp             HHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHH
Confidence            6666655554443

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.42  E-value=1.6e-12  Score=123.27  Aligned_cols=157  Identities=9%  Similarity=-0.009  Sum_probs=123.8

Q ss_pred             HHhhhhhHhhhHhh-cCCChhhHHHHHHHHHHHHhhhhcccccccccc--chhHHHHHHhHHHH-Hh-hhhccc--chhH
Q psy10432         31 DWIQGPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKF--GRKLICISYGIVYT-LC-CLTKFS--SDFY  103 (440)
Q Consensus        31 ~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~l~~~~~~~~-~~-~~~~~~--~~~~  103 (440)
                      ......+.|.+.++ +|.++.+.++...+......+..++.|++.||+  |||+.+..+..+.. ++ .+..+.  .+.+
T Consensus       268 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (451)
T 1pw4_A          268 RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPT  347 (451)
T ss_dssp             HHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHH
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHH
Confidence            33455566555555 899999999877777776666678999999999  99999888777766 55 445454  3677


Q ss_pred             HHHHHHHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccCchhhHHHH
Q psy10432        104 ILLYGRLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGL-FAIVSGFTAHFFADILNLGPIAPFAVA  182 (440)
Q Consensus       104 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~gw~~~~~~~~~  182 (440)
                      .+.+..++.|++.+...+...+++.      |..|+++|++++++.+....+ |..++|.+.+.+.+..||  +..|++.
T Consensus       348 ~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~~~~~  419 (451)
T 1pw4_A          348 VDMICMIVIGFLIYGPVMLIGLHAL------ELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW--DGGFMVM  419 (451)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHH------HTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS--HHHHHHH
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHH------HHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--HHHHHHH
Confidence            7888888999988887676666666      999999999999999999999 999999999999999888  7777777


Q ss_pred             HHHHHHHHHHHHH
Q psy10432        183 IPFLLGSTLFIYF  195 (440)
Q Consensus       183 ~~~~~~~~~~~~~  195 (440)
                      .+..++..++..+
T Consensus       420 ~~~~~~~~~~~~~  432 (451)
T 1pw4_A          420 IGGSILAVILLIV  432 (451)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            6666655554443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.34  E-value=7.9e-12  Score=117.31  Aligned_cols=145  Identities=14%  Similarity=0.111  Sum_probs=109.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccchhh
Q psy10432         49 EKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFESWY  127 (440)
Q Consensus        49 ~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~  127 (440)
                      ..+.+....+..+...+..++.|+++||+|||+.+..+..+.+++ .+..+.++.+.+++..++.+++.+...+...+++
T Consensus       258 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  337 (417)
T 2cfq_A          258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYI  337 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444555555555554555569999999999999998888888777 5666777888888888888887766655444455


Q ss_pred             hccccccccccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccC
Q psy10432        128 VNEHLNYYLFPVEWLNLTFAR-ATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHY  201 (440)
Q Consensus       128 ~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~  201 (440)
                      .      |.+|++.|+++.+. .+....+|..++|.++|.+.+..|+  ...|.+.+...++..+..+...||++
T Consensus       338 ~------~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~--~~~f~~~~~~~l~~~~~~~~~~~~~~  404 (417)
T 2cfq_A          338 T------SQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGF--QGAYLVLGLVALGFTLISVFTLSGPG  404 (417)
T ss_dssp             H------HHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHH--HHHHHHHHHHHHHHHHHHTTSSCCSC
T ss_pred             H------HHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence            5      99999999999999 4888889999999999999988777  77777766666655555455555543

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.26  E-value=8.6e-11  Score=110.96  Aligned_cols=142  Identities=15%  Similarity=0.184  Sum_probs=108.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.+++.+...++..++.++.|++.|| +|+|+.+..+....+++.+....... ....+      ..++...+.+++.+
T Consensus        61 ~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~------~l~~~~~l~G~~~~  132 (438)
T 3o7q_A           61 FQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYALGAALFWPAAE-IMNYT------LFLVGLFIIAAGLG  132 (438)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHH------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchHHHHHHHHHHHHHHHHHHhccc-cccHH------HHHHHHHHHHhhHH
Confidence            778999999999999999999999998 99999999998888887765522111 11112      35556667777888


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhcccccc-Cccch-------------------------h
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEG-GKLIA-------------------------I  391 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~-------------------------~  391 (440)
                      ...+....++.|..|+++|++++++.+...++|..++|.+.   +.+. + ..+                         +
T Consensus       133 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~w  208 (438)
T 3o7q_A          133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG---QSLILS-NVPHQSQDVLDKMSPEQLSAYKHSLVLSV  208 (438)
T ss_dssp             HHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHT---THHHHT-SSCCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH---HHHHhc-ccccccccccccCCcchhhhhhhhhhhhH
Confidence            89999999999999999999999999999999999999843   4444 3 222                         7


Q ss_pred             hHHHHHHHHHHHHHHHHHHH
Q psy10432        392 HSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~  411 (440)
                      +..|.+.++..++..+....
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~  228 (438)
T 3o7q_A          209 QTPYMIIVAIVLLVALLIML  228 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            78887766665555444433

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.23  E-value=2.8e-10  Score=110.11  Aligned_cols=172  Identities=10%  Similarity=0.082  Sum_probs=125.3

Q ss_pred             cchHHHHHHHHHHHhHHHHHHHhhhhhh----h------ccCCchhhHHHHHHHHHHHHHHHHHHHHhhcc-CCchhHHH
Q psy10432        226 PCLLTLGIVQSIYEGIMYTFIFVWTPVL----E------VLSPPLGLVFSCFMISIMIGSKIYSILILKYF-KPETMLTL  294 (440)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-~~~~~~~~  294 (440)
                      +.++...+..++.....+......++++    +      ....+.+++.+...++..++.++.|++.|| + |+|+.+..
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~~g~r~~~~~   90 (524)
T 2xut_A           12 RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADR-FFGKYNTILW   90 (524)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTT-SSCSHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHH
Confidence            4556666666666666655555455544    2      334778999999999999999999999998 9 99999888


Q ss_pred             HHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHH---hhhhhhhHH
Q psy10432        295 TVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNW---LRVPTNFIT  371 (440)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~---~~~~~~~g~  371 (440)
                      +..+..++.+.. .+..  ...+      ..+....+.+++.+...|...+++.|.+|+++|++..+.   .+...++|.
T Consensus        91 ~~~~~~~~~~~~-~~~~--~~~~------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~  161 (524)
T 2xut_A           91 LSLIYCVGHAFL-AIFE--HSVQ------GFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGS  161 (524)
T ss_dssp             HHHHHHHHHHHH-HHTS--SCHH------HHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHhc--ccHH------HHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHH
Confidence            888777766555 2211  0111      345555566777888899999999999999999766555   888999999


Q ss_pred             HHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q psy10432        372 CFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCV  411 (440)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      .++|.  .+ +.+.+ ..+++..|.+.+++.+++.+....
T Consensus       162 ~~g~~--~~-~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~  197 (524)
T 2xut_A          162 FFASL--SM-PLLLK-NFGAAVAFGIPGVLMFVATVFFWL  197 (524)
T ss_dssp             HHHHH--TS-THHHH-TSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHH--HH-HHHhc-cccHHHHHHHHHHHHHHHHHHHHH
Confidence            99998  34 66666 678899999888776666555443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.22  E-value=1.5e-10  Score=111.12  Aligned_cols=173  Identities=14%  Similarity=0.137  Sum_probs=127.0

Q ss_pred             chHHHHHHHHHHHhHHHHHHHhhhhhh-hc-----cC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHH
Q psy10432        227 CLLTLGIVQSIYEGIMYTFIFVWTPVL-EV-----LS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVY  297 (440)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~  297 (440)
                      .++......++.....+......++++ +.     .+   .+.++..+...++..++.++.|+++||++|||+.+..+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~   93 (491)
T 4aps_A           14 GLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGV   93 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHH
Confidence            344555555555555555545455555 32     34   6788999999999999999999999941599999999888


Q ss_pred             HHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhhchhhhHHhHhccCCcchh--hHHHHHHhhhhhhhHHHHHH
Q psy10432        298 LATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKA--RATITNWLRVPTNFITCFTL  375 (440)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~--~g~~~g~~~~~~~~g~~~~~  375 (440)
                      +..++.+.. ...   +..+      ..+....+.+++.+...+...+++.|.+|+++  |+.+++..+...++|..++|
T Consensus        94 ~~~~~~~~~-~~~---~~~~------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~  163 (491)
T 4aps_A           94 LIMLGHIVL-ALP---FGAS------ALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAP  163 (491)
T ss_dssp             HHHHHHHHH-HSC---CSTT------HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHh---hhHH------HHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHH
Confidence            887776555 221   1111      34555556677788889999999999999888  77888889999999999999


Q ss_pred             HHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy10432        376 IFIKNEDAEGGKLIAIHSVFVVCTACLLVALLASCVFK  413 (440)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (440)
                      .+.   +.+.+ ..+++..|.+.++..+++.+.....+
T Consensus       164 ~~~---~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~~~  197 (491)
T 4aps_A          164 LIV---GAAQE-AAGYHVAFSLAAIGMFIGLLVYYFGG  197 (491)
T ss_dssp             HHH---HHHHH-HSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH---HHHHh-hhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence            844   66666 67899999998877777666555443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.17  E-value=9.6e-11  Score=108.24  Aligned_cols=135  Identities=8%  Similarity=0.069  Sum_probs=108.6

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHHHHHHHHHhhh
Q psy10432        258 PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVG  337 (440)
Q Consensus       258 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  337 (440)
                      .+.++..+...++..++.++.|++.|| +|||+.+..+.....++.+.. ....    ...     ..+....+.+++.+
T Consensus        35 ~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~~----~~~-----~l~~~~~l~g~~~~  103 (375)
T 2gfp_A           35 GAVQSVMGAYLLTYGVSQLFYGPISDR-VGRRPVILVGMSIFMLATLVA-VTTS----SLT-----VLIAASAMQGMGTG  103 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHTT-SCCCCCCHHHHHHHHHHHHHH-HHHH----HHH-----HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHH-HHhc----cHH-----HHHHHHHHHHHHHH
Confidence            678899999999999999999999998 999999998888887777655 2211    111     34445556667778


Q ss_pred             chhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHH
Q psy10432        338 MYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALL  407 (440)
Q Consensus       338 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (440)
                      ...+....++.|..|+++|+++++..+....+|..++|.+.   +.+.+ ..+++..|.+.++..++..+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~l~~-~~~~~~~~~~~~~~~~~~~~  169 (375)
T 2gfp_A          104 VGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIG---GLLDT-MWNWRACYLFLLVLCAGVTF  169 (375)
T ss_dssp             HHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHH---HHSSC-HHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHH---HHHHH-hccHHHHHHHHHHHHHHHHH
Confidence            88899999999999999999999999999999999999943   66767 77889999888777666554

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.04  E-value=3e-09  Score=101.98  Aligned_cols=162  Identities=17%  Similarity=0.042  Sum_probs=104.2

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcc---c-chhHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKF---S-SDFYILLYG  108 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~---~-~~~~~l~~~  108 (440)
                      ...+.+.+.++.+.+..+.............+..++.+.+.||+|||+.++.+.....++ ...+.   . .+.+..++.
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  375 (491)
T 4gc0_A          296 VLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLS  375 (491)
T ss_dssp             HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             HHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHH
Confidence            334455566777777666555444444444444569999999999999998888777766 32221   1 111222222


Q ss_pred             HHHHHHHH-hhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh------cccCchhhHHH
Q psy10432        109 RLFGGIAT-SILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADI------LNLGPIAPFAV  181 (440)
Q Consensus       109 r~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------~gw~~~~~~~~  181 (440)
                      -++...+. ....|....+..      |.+|.+.|+++.|+......++..+++.+...+.+.      .++  ...|++
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~------E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~--~~~~~i  447 (491)
T 4gc0_A          376 MLFYVAAFAMSWGPVCWVLLS------EIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHN--GFSYWI  447 (491)
T ss_dssp             HHHHHHHHHTTTTHHHHHHHH------HSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTT--CHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHH------HhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hHHHHH
Confidence            22222221 122233334455      999999999999999999999999988877665432      233  556777


Q ss_pred             HHHHHHHHHHHHHHhccccCCC
Q psy10432        182 AIPFLLGSTLFIYFCWEEHYDP  203 (440)
Q Consensus       182 ~~~~~~~~~~~~~~~~~e~~~~  203 (440)
                      .+.+.++..++.++++||++.+
T Consensus       448 ~~~~~~~~~i~~~~~~PETkg~  469 (491)
T 4gc0_A          448 YGCMGVLAALFMWKFVPETKGK  469 (491)
T ss_dssp             HHHHHHHHHHHHHHHCCCCTTC
T ss_pred             HHHHHHHHHHHHHheecCCCCC
Confidence            7777777777788899998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	440
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	2e-07
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	1e-06

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 45/425 (10%), Positives = 121/425 (28%), Gaps = 22/425 (5%)

Query: 7   EKTNMEFKRLQVRYFIPFFLATFS---DWIQGPYVYKVYKDYGYDEKNIALLYIAGFASS 63
            + +  ++RL+ + F+  F    +                + G+   ++         + 
Sbjct: 13  AEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAY 72

Query: 64  MIFGIVVGSIADKFGRKLICISYGIVYTLCCLTKFSSDFYILLYGRLFGGIATSILFSGF 123
                ++GS++D+   ++   +  I+     L      +       +F  +     F G 
Sbjct: 73  GFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGM 132

Query: 124 ESWYVNEHLNYYLFPV---EWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFA 180
                   + ++         +++       G G+  ++      +F D      +  F 
Sbjct: 133 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFC 192

Query: 181 VAIPFLLGSTLFIYFCWEEHYDPKTAKSSLLPNSMFSS-----------LKFLFTNPCLL 229
             +  L    +           P     +  P+                ++++  N  L 
Sbjct: 193 AILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLW 252

Query: 230 TLGIVQSIYEGIMYTFIFVWTPVLEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPE 289
            + I       + Y  +  W+P          L  S +   +   + I   L+  +   +
Sbjct: 253 YIAIANVFVYLLRYGILD-WSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK 311

Query: 290 TMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGR 349
                      F +T+ T+ T  ++      +  +  +  ++    +     + G     
Sbjct: 312 VFRGNRGATGVFFMTLVTIAT-IVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALE 370

Query: 350 IIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVALLAS 409
           + P+KA  T   +  +            I     +          F+V     ++A++  
Sbjct: 371 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILL 427

Query: 410 CVFKR 414
            V   
Sbjct: 428 IVVMI 432

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 47.8 bits (112), Expect = 1e-06
 Identities = 45/405 (11%), Positives = 92/405 (22%), Gaps = 23/405 (5%)

Query: 19  RYFIPFFLATFSDWIQGPYVYKVYKD-YGYDEKNIALLYIAGFASSMIFGIVVGSIADKF 77
            + + FF   F      P+      D     + +  +++ A    S++F  + G ++DK 
Sbjct: 11  MFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL 70

Query: 78  GRKLICISYGIVYTLCCL-----TKFSSDFYILLYGRLFGGIATSILFSGFESWYVNEHL 132
           G +   +       +               Y +L G + GGI     F+           
Sbjct: 71  GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIE 130

Query: 133 NYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLF 192
                              G  L A + G         +         +    L  +   
Sbjct: 131 KVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTD 190

Query: 193 IYFCWEEHYDPKTAKSSLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTPV 252
                          S+          +        L +  V   Y+     F   +T  
Sbjct: 191 APSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSF 250

Query: 253 LEVLSPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSS 312
                    +      +  ++ + I     L   +      L +     S+         
Sbjct: 251 FATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSV--------R 302

Query: 313 LFDSRRVLSTNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITC 372
           +  S    S     +   ++   V                 +  ATI          +  
Sbjct: 303 IIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAM 362

Query: 373 FTLIFIKNEDAEGGKLIA---IHSVFVVCTACLLVALLASCVFKR 414
             +  +       G +         ++V     L   L S     
Sbjct: 363 IFMSVL------AGNMYESIGFQGAYLVLGLVALGFTLISVFTLS 401

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	440
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.96
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.41
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.29

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-34  Score=271.52  Aligned_cols=362  Identities=9%  Similarity=0.026  Sum_probs=259.8

Q ss_pred             hhhhHhhhHhhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhccc----chhHHHHHH
Q psy10432         34 QGPYVYKVYKDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFS----SDFYILLYG  108 (440)
Q Consensus        34 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~----~~~~~l~~~  108 (440)
                      .+... +..+|+|.|.+|+|++.++..+...+.++++|+++||+|||+++..+.++.+++ ++++++    ++++.+++.
T Consensus        44 ~~~~~-p~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (447)
T d1pw4a_          44 FALAM-PYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL  122 (447)
T ss_dssp             HHHHH-HHTTSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHH
T ss_pred             HHHHH-HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHH
Confidence            34444 444678999999999888777777777789999999999999999999998887 555554    578899999


Q ss_pred             HHHHHHHHhhhccccchhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchhhHHHHHHHHH
Q psy10432        109 RLFGGIATSILFSGFESWYVNEHLNYYLFPVEWLNLTFARATFGSGLFAIVSGFTAHFFADIL-NLGPIAPFAVAIPFLL  187 (440)
Q Consensus       109 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~~~~~~~~~~~~  187 (440)
                      |++.|++.+...+...+++.      |++|+++|++++++.+.+..+|..++|.+++.+.+.. +|  +..+++......
T Consensus       123 ~~~~g~~~~~~~~~~~~~i~------~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w--~~~~~~~~~~~~  194 (447)
T d1pw4a_         123 LFLCGWFQGMGWPPCGRTMV------HWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDW--HAALYMPAFCAI  194 (447)
T ss_dssp             HHHHHHHHHHTHHHHHHHHH------TTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCS--TTCTHHHHHHHH
T ss_pred             HHHHHHhhhhhhhHHHHHHH------HHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcc--cccchhhhhhHH
Confidence            99999999999887777777      9999999999999999999999999999998877764 67  777777766666


Q ss_pred             HHHHHHHHhccccCCCCCccCC----------------CCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHHhhhh
Q psy10432        188 GSTLFIYFCWEEHYDPKTAKSS----------------LLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIFVWTP  251 (440)
Q Consensus       188 ~~~~~~~~~~~e~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (440)
                      +..++.+...+|++++.+....                .+........+..+++|.++......++.....+......+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (447)
T d1pw4a_         195 LVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPT  274 (447)
T ss_dssp             HHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhh
Confidence            6666666666665542211100                001111223556778888888777777777776666554444


Q ss_pred             hh-hccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHHHH
Q psy10432        252 VL-EVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLCFV  327 (440)
Q Consensus       252 ~~-~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (440)
                      ++ +..+   .+.+.......++.+++.++.|++.|| .++++..........+.................     ....
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  348 (447)
T d1pw4a_         275 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWMNPAGNPT-----VDMI  348 (447)
T ss_dssp             HBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHH-----HHHH
T ss_pred             hcccccccccchhhhhhhcchhhhhhhhhhhhhhhhh-ccccccccccchhHHHHHHHHHHHHhcccccHH-----HHHH
Confidence            44 3333   567788888899999999999999998 887765554444433333333222222221121     2344


Q ss_pred             HHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHH-HHHHHHhhccccccCccchhhHHHHHHHHHHHHHH
Q psy10432        328 AFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFIT-CFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVAL  406 (440)
Q Consensus       328 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (440)
                      ...+.+++.+...+.......|..|++.||++.|+.+...++++ ..+|.+.   +.+.| ..|++..|.+.+++.+++.
T Consensus       349 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~---g~~~~-~~g~~~~~~~~~~~~~~~~  424 (447)
T d1pw4a_         349 CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV---GYTVD-FFGWDGGFMVMIGGSILAV  424 (447)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-SSCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HhChHHHHHHHHHHHHHHH
Confidence            44455555666677888889999999999999999999888754 5567643   66777 7788888888877777766


Q ss_pred             HHHHHhhh
Q psy10432        407 LASCVFKR  414 (440)
Q Consensus       407 ~~~~~~~~  414 (440)
                      ++.....+
T Consensus       425 ~~~~~~~~  432 (447)
T d1pw4a_         425 ILLIVVMI  432 (447)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            65554443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=6.4e-28  Score=224.27  Aligned_cols=372  Identities=14%  Similarity=0.026  Sum_probs=243.1

Q ss_pred             HHHHHHHHHHHHHHhhhhhHhhhH-hhcCCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhh
Q psy10432         19 RYFIPFFLATFSDWIQGPYVYKVY-KDYGYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLT   96 (440)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~   96 (440)
                      ......+...++.+...|++|... +++|.|++++|++.++..+...+.+|++|+++||+||||+++.+.....++ .+.
T Consensus        11 ~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~   90 (417)
T d1pv7a_          11 MFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPF   90 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence            333445555566667788886544 678999999999999999888888899999999999999999998888887 555


Q ss_pred             cccchhHHH----HHHHHHHHHHHhhhccccchhhhccccccccccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10432         97 KFSSDFYIL----LYGRLFGGIATSILFSGFESWYVNEHLNYYLFPV--EWLNLTFARATFGSGLFAIVSGFTAHFFADI  170 (440)
Q Consensus        97 ~~~~~~~~l----~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  170 (440)
                      .+..+....    +..+.+.+.+.+...+.......      +..++  +++.+..+........+..++|.+++.+.+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  164 (417)
T d1pv7a_          91 FIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVE------AFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI  164 (417)
T ss_dssp             HHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHH------HHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhHHHHHHHHHHHhhhcccccccchhhccc------ccccchhhhhHHHHHHHhhhhccccccccccccccccc
Confidence            555554443    34444444444444332222222      22222  3455567788888899999999999999887


Q ss_pred             cccCchhhHHHHHHHHHHHHHHHHHhccccCCCCCccC---CCCccchhhhhhhhccCcchHHHHHHHHHHHhHHHHHHH
Q psy10432        171 LNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYDPKTAKS---SLLPNSMFSSLKFLFTNPCLLTLGIVQSIYEGIMYTFIF  247 (440)
Q Consensus       171 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (440)
                      .+   +..+........+......+..+|+++++++++   +.+.+......+...+++..+..................
T Consensus       165 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (417)
T d1pv7a_         165 NN---QFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQ  241 (417)
T ss_dssp             CH---HHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc---cccccchhhHHHHHHHHHHHHhcccccchhhhhhhhhhcccccccccccccccccccchhhhhHHHHHHHHhhhc
Confidence            43   445555544444455555556666554333221   111112223333444545444433333332222222211


Q ss_pred             hhhhhh----hcc---CCchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhc
Q psy10432        248 VWTPVL----EVL---SPPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVL  320 (440)
Q Consensus       248 ~~~~~~----~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (440)
                      ......    +..   ....+.......++..++..+.+++.|| .++++.+..+.....+..+.+ ...   ...+   
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~---  313 (417)
T d1pv7a_         242 QFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINR-IGGKNALLLAGTIMSVRIIGS-SFA---TSAL---  313 (417)
T ss_dssp             HHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH-HCHHHHHHHHHHHHHHHHHHH-HTC---CCHH---
T ss_pred             cccccccccccccccchhhhcccccccccccccchhhhhhhhcc-cccccchhhhHHHHHHhhhcc-ccc---cccc---
Confidence            111111    111   1455667777888889999999999998 999999888887777766554 211   1112   


Q ss_pred             chhHHHHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHh-hhhhhhHHHHHHHHhhccccccCccchhhHHHHHHH
Q psy10432        321 STNLCFVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWL-RVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCT  399 (440)
Q Consensus       321 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (440)
                         .......+.+++.+...+...++++|.+|++.|+++.|+. +....+|..++|.+.   |.+.| ..|++..|.+.+
T Consensus       314 ---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~---G~l~~-~~g~~~~~~~~~  386 (417)
T d1pv7a_         314 ---EVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLA---GNMYE-SIGFQGAYLVLG  386 (417)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHH---HHHHH-HHCHHHHHHHHH
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHCHHHHHHHHH
Confidence               3455555667778888899999999999999999999975 556678999999854   77888 889999999888


Q ss_pred             HHHHHHHHHHHHhhh
Q psy10432        400 ACLLVALLASCVFKR  414 (440)
Q Consensus       400 ~~~~~~~~~~~~~~~  414 (440)
                      ++.++..++.....+
T Consensus       387 ~~~~~~~~~~~~~l~  401 (417)
T d1pv7a_         387 LVALGFTLISVFTLS  401 (417)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhhc
Confidence            887777666555444

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=5.5e-13  Score=122.20  Aligned_cols=149  Identities=13%  Similarity=0.107  Sum_probs=122.4

Q ss_pred             CCChhhHHHHHHHHHHHHhhhhccccccccccchhHHHHHHhHHHHHh-hhhcccchhHHHHHHHHHHHHHHhhhccccc
Q psy10432         46 GYDEKNIALLYIAGFASSMIFGIVVGSIADKFGRKLICISYGIVYTLC-CLTKFSSDFYILLYGRLFGGIATSILFSGFE  124 (440)
Q Consensus        46 g~s~~~~~~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~  124 (440)
                      +.+....+...........+..++.+++.||+|||+.+..+..+.+++ ....+.++.+.+++..++.|++.+...+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  334 (417)
T d1pv7a_         255 EQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF  334 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            344455555666666666666689999999999999999999999888 6788899999999999999999999988777


Q ss_pred             hhhhccccccccccchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHhccccCC
Q psy10432        125 SWYVNEHLNYYLFPVEWLNLTFARA-TFGSGLFAIVSGFTAHFFADILNLGPIAPFAVAIPFLLGSTLFIYFCWEEHYD  202 (440)
Q Consensus       125 ~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  202 (440)
                      +++.      |.+|+++|++..+.. +....+|..++|.++|++.+.+|+  +..+++.+.+.++..++..+.++++.+
T Consensus       335 ~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~~  405 (417)
T d1pv7a_         335 KYIT------SQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGF--QGAYLVLGLVALGFTLISVFTLSGPGP  405 (417)
T ss_dssp             HHHH------HHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             HHHH------HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence            7777      999999999999985 566789999999999999999998  778877777776666666666665433

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=2.2e-11  Score=112.93  Aligned_cols=154  Identities=16%  Similarity=0.122  Sum_probs=111.1

Q ss_pred             hhhhhhccC---CchhhHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHhhhccccchhhcchhHH
Q psy10432        249 WTPVLEVLS---PPLGLVFSCFMISIMIGSKIYSILILKYFKPETMLTLTVYLATFSITVSTVLTSSLFDSRRVLSTNLC  325 (440)
Q Consensus       249 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (440)
                      ..|..++.+   .+.|++.+...++..++.++.|+++|| +|||+.+..+.++..++.+........... ..     ..
T Consensus        47 ~~p~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~  119 (447)
T d1pw4a_          47 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAAVMLFMGFVPWATSS-IA-----VM  119 (447)
T ss_dssp             HHHHTTSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHCHHHHSS-SS-----HH
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHhhccccchhhhh-HH-----HH
Confidence            345553333   889999999999999999999999998 999999999888887776555221111111 11     34


Q ss_pred             HHHHHHHHHhhhchhhhHHhHhccCCcchhhHHHHHHhhhhhhhHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHH
Q psy10432        326 FVAFLIYEISVGMYCPVTGYLRGRIIPEKARATITNWLRVPTNFITCFTLIFIKNEDAEGGKLIAIHSVFVVCTACLLVA  405 (440)
Q Consensus       326 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (440)
                      +..-.+.+++.+...+....++.|..|+++|++++|+.+....+|..++|.+.   +...+...+++..+.+.+.+.++.
T Consensus       120 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~---~~~~~~~~~w~~~~~~~~~~~~~~  196 (447)
T d1pw4a_         120 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF---LLGMAWFNDWHAALYMPAFCAILV  196 (447)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH---HHHHHHTCCSTTCTHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhh---hhHhhhhhcccccchhhhhhHHHH
Confidence            44555666677888899999999999999999999999999999999988743   222221345677777766666555


Q ss_pred             HHHHHHh
Q psy10432        406 LLASCVF  412 (440)
Q Consensus       406 ~~~~~~~  412 (440)
                      .++.+..
T Consensus       197 ~~~~~~~  203 (447)
T d1pw4a_         197 ALFAFAM  203 (447)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5554444