Psyllid ID: psy10444

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVCK
cccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHccccEEEEEcccEEEEEEcccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccc
EEEEccccccHHHccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccEEEEEccccEEEEEcccHHHccccccccccccccccccccccccccccEcccccEcccccccEEEEccccccccccccccccccccccEEEccEEEEEEEccccccccHHHccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcHHHcccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEcccEEEEccccccccccEEEEEccccccHHHccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccc
milprthvlrftdlddqQRNNLADIIKKITTKYDNlfkvsfpysmgfhehqhvrynplkgewilvsphrmkrpwsgqeeksnedpiaefdpknplcptatrgngevnpnydsvfvfnndfpallenvpsppvqddplfkmgnasgvckvicfhpksnttlpimsIEEIRKVIDTWVDETASLGKTYEWVQIFENkgaimgcsnphphcqvwassflpnlprikdihqreyyqthgkplLMDYVSKellkrkqpTSVAVWLKELLKrdrvvvrnpdwvvvvpfwaewpfetmilprthvlrftdlddqQRNNLADIIKKITTKYDNlfkvsfpysmgfhvck
milprthvlrftdlddqqrnNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPksnttlpimSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKEllkrdrvvvrnpdwVVVVPFWAEWPFETMILPRTHVLrftdlddqqrNNLADIIKKITTKYDNLFkvsfpysmgfhvck
MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKrdrvvvrnpdwvvvvpFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVCK
******HVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVS****************************************NPNYDSVFVFNNDFPALLENV*******DPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC*
MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVCK
MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHR****************IAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVCK
MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC*
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MILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVCK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query341 2.2.26 [Sep-21-2011]
Q03249379 Galactose-1-phosphate uri yes N/A 0.803 0.722 0.568 2e-99
P07902379 Galactose-1-phosphate uri yes N/A 0.803 0.722 0.562 3e-98
P43424379 Galactose-1-phosphate uri yes N/A 0.803 0.722 0.562 1e-97
Q9VMA2350 Probable galactose-1-phos yes N/A 0.803 0.782 0.565 4e-97
P31764349 Galactose-1-phosphate uri yes N/A 0.809 0.790 0.534 9e-90
P22714348 Galactose-1-phosphate uri yes N/A 0.803 0.787 0.5 3e-85
P09148348 Galactose-1-phosphate uri N/A N/A 0.803 0.787 0.496 5e-85
Q27536352 Probable galactose-1-phos yes N/A 0.785 0.761 0.449 1e-72
P09580370 Galactose-1-phosphate uri yes N/A 0.818 0.754 0.427 6e-69
Q9HDU5369 Galactose-1-phosphate uri yes N/A 0.806 0.745 0.403 2e-65
>sp|Q03249|GALT_MOUSE Galactose-1-phosphate uridylyltransferase OS=Mus musculus GN=Galt PE=2 SV=3 Back     alignment and function desciption
 Score =  362 bits (930), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 165/290 (56%), Positives = 209/290 (72%), Gaps = 16/290 (5%)

Query: 49  EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
           EHQH+RYNPL+ EW+LVS HRMKRPW GQ E      +   DP NPLCP ATR NGEVNP
Sbjct: 28  EHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGATRANGEVNP 87

Query: 109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
           +YD  F+F+NDFPAL  + P P   D PLF+   A GVCKV+CFHP S+ TLP+MS+ EI
Sbjct: 88  HYDGTFLFDNDFPALQPDAPDPGPSDHPLFRAEAARGVCKVMCFHPWSDVTLPLMSVPEI 147

Query: 169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQR 228
           R VID W   T  LG  Y WVQIFENKGA+MGCSNPHPHCQVWASSFLP++ + ++  Q+
Sbjct: 148 RAVIDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQ 207

Query: 229 EYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPF 288
            Y+  HGKPLL++Y                  +ELL+++R+V+ +  W+V+VPFWA WPF
Sbjct: 208 TYHSQHGKPLLLEYGH----------------QELLRKERLVLTSEHWIVLVPFWAVWPF 251

Query: 289 ETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 338
           +T++LPR HV R  +L+  +R++LA I+KK+ TKYDNLF+ SFPYSMG+H
Sbjct: 252 QTLLLPRRHVRRLPELNPAERDDLASIMKKLLTKYDNLFETSFPYSMGWH 301

Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 1EC: 2
>sp|P07902|GALT_HUMAN Galactose-1-phosphate uridylyltransferase OS=Homo sapiens GN=GALT PE=1 SV=3 Back     alignment and function description
>sp|P43424|GALT_RAT Galactose-1-phosphate uridylyltransferase OS=Rattus norvegicus GN=Galt PE=2 SV=1 Back     alignment and function description
>sp|Q9VMA2|GALT_DROME Probable galactose-1-phosphate uridylyltransferase OS=Drosophila melanogaster GN=Galt PE=1 SV=2 Back     alignment and function description
>sp|P31764|GAL7_HAEIN Galactose-1-phosphate uridylyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=galT PE=3 SV=2 Back     alignment and function description
>sp|P22714|GAL7_SALTY Galactose-1-phosphate uridylyltransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=galT PE=3 SV=2 Back     alignment and function description
>sp|P09148|GAL7_ECOLI Galactose-1-phosphate uridylyltransferase OS=Escherichia coli (strain K12) GN=galT PE=1 SV=2 Back     alignment and function description
>sp|Q27536|GALT_CAEEL Probable galactose-1-phosphate uridylyltransferase OS=Caenorhabditis elegans GN=ZK1058.3 PE=3 SV=1 Back     alignment and function description
>sp|P09580|GAL7_KLULA Galactose-1-phosphate uridylyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL7 PE=3 SV=2 Back     alignment and function description
>sp|Q9HDU5|GAL7_SCHPO Galactose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gal7 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query341
170033792350 galactose-1-phosphate uridylyltransferas 0.803 0.782 0.631 1e-106
157120732351 galactose-1-phosphate uridylyltransferas 0.803 0.780 0.627 1e-105
442758247351 Putative galactose-1-phosphate uridylylt 0.803 0.780 0.606 1e-105
347971921351 AGAP004451-PA [Anopheles gambiae str. PE 0.803 0.780 0.620 1e-105
321473045353 hypothetical protein DAPPUDRAFT_187801 [ 0.809 0.781 0.593 1e-105
156554896363 PREDICTED: galactose-1-phosphate uridyly 0.803 0.754 0.589 1e-103
312372860441 hypothetical protein AND_19608 [Anophele 0.803 0.621 0.564 1e-102
307177332426 Galactose-1-phosphate uridylyltransferas 0.803 0.643 0.575 1e-101
307194530366 Probable galactose-1-phosphate uridylylt 0.815 0.759 0.574 1e-101
432888080369 PREDICTED: galactose-1-phosphate uridyly 0.803 0.742 0.586 1e-100
>gi|170033792|ref|XP_001844760.1| galactose-1-phosphate uridylyltransferase [Culex quinquefasciatus] gi|167874837|gb|EDS38220.1| galactose-1-phosphate uridylyltransferase [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/290 (63%), Positives = 208/290 (71%), Gaps = 16/290 (5%)

Query: 49  EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
           EHQH RYNPL G+W+LVSPHRMKRPWSGQEE      I EFDP NPLCP   R NG  NP
Sbjct: 7   EHQHTRYNPLNGQWVLVSPHRMKRPWSGQEESPQSLDIPEFDPSNPLCPGVVRSNGAKNP 66

Query: 109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
            Y S FVF NDFPALLE+VP PP  DDPLF+ G A G C+V+CFHPKSN TLP+M+ +EI
Sbjct: 67  IYTSTFVFTNDFPALLEDVPIPPESDDPLFQTGGARGTCRVMCFHPKSNKTLPLMTPKEI 126

Query: 169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQR 228
           R VID W+ E   L   Y WVQIFENKGA MGCSNPHPHCQ+WA SFLPN PR+KD   R
Sbjct: 127 RTVIDAWIAEFKVLAVKYTWVQIFENKGASMGCSNPHPHCQIWACSFLPNEPRVKDEKLR 186

Query: 229 EYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPF 288
           +YY+THG  LL DY                  KE+ K++RVV+ N DW+VVVPFWA WPF
Sbjct: 187 DYYRTHGTALLDDYAK----------------KEIAKKERVVIENADWLVVVPFWAVWPF 230

Query: 289 ETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 338
           ETMI+ R    R +DL  QQ NNLA +IK++T KYDNLFK SFPYSMG+H
Sbjct: 231 ETMIISRNGARRMSDLTQQQINNLAIVIKELTIKYDNLFKCSFPYSMGWH 280

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157120732|ref|XP_001659745.1| galactose-1-phosphate uridylyltransferase [Aedes aegypti] gi|108883034|gb|EAT47259.1| AAEL001607-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|442758247|gb|JAA71282.1| Putative galactose-1-phosphate uridylyltransferase [Ixodes ricinus] Back     alignment and taxonomy information
>gi|347971921|ref|XP_313741.5| AGAP004451-PA [Anopheles gambiae str. PEST] gi|333469091|gb|EAA09124.5| AGAP004451-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|321473045|gb|EFX84013.1| hypothetical protein DAPPUDRAFT_187801 [Daphnia pulex] Back     alignment and taxonomy information
>gi|156554896|ref|XP_001600507.1| PREDICTED: galactose-1-phosphate uridylyltransferase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|312372860|gb|EFR20731.1| hypothetical protein AND_19608 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|307177332|gb|EFN66505.1| Galactose-1-phosphate uridylyltransferase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307194530|gb|EFN76822.1| Probable galactose-1-phosphate uridylyltransferase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|432888080|ref|XP_004075057.1| PREDICTED: galactose-1-phosphate uridylyltransferase-like [Oryzias latipes] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query341
ZFIN|ZDB-GENE-070112-172369 galt "galactose-1-phosphate ur 0.803 0.742 0.562 1.8e-87
MGI|MGI:95638379 Galt "galactose-1-phosphate ur 0.800 0.720 0.553 1.8e-87
UNIPROTKB|F1S3U0379 GALT "Galactose-1-phosphate ur 0.800 0.720 0.556 2.9e-87
UNIPROTKB|E2RB65380 GALT "Galactose-1-phosphate ur 0.800 0.718 0.556 7.7e-87
UNIPROTKB|P07902379 GALT "Galactose-1-phosphate ur 0.803 0.722 0.547 7.7e-87
UNIPROTKB|Q58CX1360 GALT "Galactose-1-phosphate ur 0.800 0.758 0.549 1.6e-86
RGD|1306483379 Galt "galactose-1-phosphate ur 0.803 0.722 0.544 1.6e-86
FB|FBgn0263200350 Galt "Galactose-1-phosphate ur 0.803 0.782 0.537 4.4e-84
TIGR_CMR|VC_1596372 VC_1596 "galactose-1-phosphate 0.803 0.736 0.496 3.9e-76
UNIPROTKB|Q0V7N7331 GALT "Galactose-1-phosphate ur 0.739 0.761 0.533 8.1e-76
ZFIN|ZDB-GENE-070112-172 galt "galactose-1-phosphate uridylyltransferase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 163/290 (56%), Positives = 200/290 (68%)

Query:    49 EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
             EHQH+RYNPL+  W+LVS HRMKRPW GQ EK  ED I   DP NPLCP + R NGE+NP
Sbjct:    13 EHQHLRYNPLRDSWVLVSAHRMKRPWKGQVEKPPEDNIPRHDPNNPLCPGSVRANGELNP 72

Query:   109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
              YDS F+F+NDFPAL  + P P     PLF+   A GVCKV+CFHP S+ TLP+M   EI
Sbjct:    73 EYDSTFMFDNDFPALQPDAPDPGSDHHPLFQSKAARGVCKVMCFHPWSDITLPLMQPAEI 132

Query:   169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQR 228
             RKVID W D T  LG TY WVQIFENKGA+MGCSNPHPHCQVWAS+FLPN   + +  QR
Sbjct:   133 RKVIDKWADLTVELGATYAWVQIFENKGAMMGCSNPHPHCQVWASNFLPNEASLAERCQR 192

Query:   229 EYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKXXXXXXXXXXXXXXXXFWAEWPF 288
             ++ Q HG+P+L+ Y   E   +++   V V  +  L                 +WA WPF
Sbjct:   193 DFLQKHGEPMLVQYARMEAQAQER---VVVENEHWL-------------VVVPYWATWPF 236

Query:   289 ETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 338
             +T++LPR HVLR  DL  Q+R++LA I+K++ TKYDNLF+VSFPYSMG+H
Sbjct:   237 QTLLLPRRHVLRLPDLTTQERDSLASIMKRLLTKYDNLFEVSFPYSMGWH 286
GO:0003824 "catalytic activity" evidence=IEA
GO:0006012 "galactose metabolic process" evidence=IEA
GO:0008108 "UDP-glucose:hexose-1-phosphate uridylyltransferase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005575 "cellular_component" evidence=ND
GO:0046872 "metal ion binding" evidence=IEA
GO:0016740 "transferase activity" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
MGI|MGI:95638 Galt "galactose-1-phosphate uridyl transferase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1S3U0 GALT "Galactose-1-phosphate uridylyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RB65 GALT "Galactose-1-phosphate uridylyltransferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P07902 GALT "Galactose-1-phosphate uridylyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q58CX1 GALT "Galactose-1-phosphate uridylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1306483 Galt "galactose-1-phosphate uridylyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0263200 Galt "Galactose-1-phosphate uridylyltransferase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1596 VC_1596 "galactose-1-phosphate uridylyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q0V7N7 GALT "Galactose-1-phosphate uridylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P09580GAL7_KLULA2, ., 7, ., 7, ., 1, 20.42710.81810.7540yesN/A
P22714GAL7_SALTY2, ., 7, ., 7, ., 1, 20.50.80350.7873yesN/A
Q9HDU5GAL7_SCHPO2, ., 7, ., 7, ., 1, 20.40320.80640.7452yesN/A
Q27536GALT_CAEEL2, ., 7, ., 7, ., 1, 20.44980.78590.7613yesN/A
P43424GALT_RAT2, ., 7, ., 7, ., 1, 20.56200.80350.7229yesN/A
P08431GAL7_YEAST2, ., 7, ., 7, ., 1, 20.39210.80930.7540yesN/A
Q9VMA2GALT_DROME2, ., 7, ., 7, ., 1, 20.56550.80350.7828yesN/A
P31764GAL7_HAEIN2, ., 7, ., 7, ., 1, 20.53420.80930.7908yesN/A
P0CN76GAL7_CRYNJ2, ., 7, ., 7, ., 1, 20.42150.81520.7296yesN/A
P07902GALT_HUMAN2, ., 7, ., 7, ., 1, 20.56200.80350.7229yesN/A
O33836GAL7_THEMA2, ., 7, ., 7, ., 1, 20.31700.73310.7861yesN/A
Q03249GALT_MOUSE2, ., 7, ., 7, ., 1, 20.56890.80350.7229yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.70.921
4th Layer2.7.7.120.914

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query341
PRK11720346 PRK11720, PRK11720, galactose-1-phosphate uridylyl 1e-168
cd00608329 cd00608, GalT, Galactose-1-phosphate uridyl transf 1e-132
TIGR00209347 TIGR00209, galT_1, galactose-1-phosphate uridylylt 1e-122
COG1085338 COG1085, GalT, Galactose-1-phosphate uridylyltrans 2e-96
pfam01087170 pfam01087, GalP_UDP_transf, Galactose-1-phosphate 4e-68
pfam02744168 pfam02744, GalP_UDP_tr_C, Galactose-1-phosphate ur 4e-32
PLN02643336 PLN02643, PLN02643, ADP-glucose phosphorylase 6e-24
PRK11720346 PRK11720, PRK11720, galactose-1-phosphate uridylyl 1e-22
cd00608329 cd00608, GalT, Galactose-1-phosphate uridyl transf 1e-16
TIGR00209347 TIGR00209, galT_1, galactose-1-phosphate uridylylt 7e-16
pfam02744168 pfam02744, GalP_UDP_tr_C, Galactose-1-phosphate ur 3e-14
COG1085338 COG1085, GalT, Galactose-1-phosphate uridylyltrans 3e-11
cd0046886 cd00468, HIT_like, HIT family: HIT (Histidine tria 1e-09
>gnl|CDD|236963 PRK11720, PRK11720, galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information 
 Score =  471 bits (1214), Expect = e-168
 Identities = 155/290 (53%), Positives = 201/290 (69%), Gaps = 16/290 (5%)

Query: 49  EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
           +H H RYNPL G+W+LVSPHR KRPW GQ+E   ++ +  +DP   LCP  TR  G+VNP
Sbjct: 8   DHPHRRYNPLTGQWVLVSPHRAKRPWQGQQETPAKETLPAYDPDCFLCPGNTRVTGDVNP 67

Query: 109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
           +Y   +VF NDF AL+ + P  P  DDPLF+  +A G  +VICF P  + TLP +S+  +
Sbjct: 68  DYTGTYVFTNDFAALMPDTPDAPESDDPLFRCQSARGTSRVICFSPDHSKTLPELSVAAL 127

Query: 169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQR 228
           R+V+DTW ++TA LGKTY WVQ+FENKGA MGCSNPHPH Q+WA+SFLPN    +D  QR
Sbjct: 128 REVVDTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAEREDRLQR 187

Query: 229 EYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPF 288
            Y+  HG PLL+DYV                 +EL   +R+VV    W+ VVP+WA WPF
Sbjct: 188 AYFAEHGSPLLVDYVQ----------------RELADGERIVVETEHWLAVVPYWAAWPF 231

Query: 289 ETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 338
           ET++LP+ HVLR TDL D QR++LA  +KK+T++YDNLF+ SFPYSMG+H
Sbjct: 232 ETLLLPKAHVLRLTDLTDAQRDDLALALKKLTSRYDNLFQCSFPYSMGWH 281

Length = 346
>gnl|CDD|238341 cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate Back     alignment and domain information
>gnl|CDD|129313 TIGR00209, galT_1, galactose-1-phosphate uridylyltransferase, family 1 Back     alignment and domain information
>gnl|CDD|224010 COG1085, GalT, Galactose-1-phosphate uridylyltransferase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|216293 pfam01087, GalP_UDP_transf, Galactose-1-phosphate uridyl transferase, N-terminal domain Back     alignment and domain information
>gnl|CDD|145739 pfam02744, GalP_UDP_tr_C, Galactose-1-phosphate uridyl transferase, C-terminal domain Back     alignment and domain information
>gnl|CDD|215346 PLN02643, PLN02643, ADP-glucose phosphorylase Back     alignment and domain information
>gnl|CDD|236963 PRK11720, PRK11720, galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238341 cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate Back     alignment and domain information
>gnl|CDD|129313 TIGR00209, galT_1, galactose-1-phosphate uridylyltransferase, family 1 Back     alignment and domain information
>gnl|CDD|145739 pfam02744, GalP_UDP_tr_C, Galactose-1-phosphate uridyl transferase, C-terminal domain Back     alignment and domain information
>gnl|CDD|224010 COG1085, GalT, Galactose-1-phosphate uridylyltransferase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|238263 cd00468, HIT_like, HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 341
TIGR00209347 galT_1 galactose-1-phosphate uridylyltransferase, 100.0
PRK11720346 galactose-1-phosphate uridylyltransferase; Provisi 100.0
PLN02643336 ADP-glucose phosphorylase 100.0
cd00608329 GalT Galactose-1-phosphate uridyl transferase (Gal 100.0
KOG2958|consensus354 100.0
COG1085338 GalT Galactose-1-phosphate uridylyltransferase [En 100.0
PF01087183 GalP_UDP_transf: Galactose-1-phosphate uridyl tran 100.0
PF02744166 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transf 99.93
cd01278104 aprataxin_related aprataxin related: Aprataxin, a 99.82
cd01277103 HINT_subgroup HINT (histidine triad nucleotide-bin 99.81
cd01276104 PKCI_related Protein Kinase C Interacting protein 99.79
cd01275126 FHIT FHIT (fragile histidine family): FHIT protein 99.75
COG0537138 Hit Diadenosine tetraphosphate (Ap4A) hydrolase an 99.62
PRK10687119 purine nucleoside phosphoramidase; Provisional 99.61
cd0046886 HIT_like HIT family: HIT (Histidine triad) protein 99.5
PF0123098 HIT: HIT domain; InterPro: IPR001310 The Histidine 99.38
KOG3275|consensus127 99.33
KOG2958|consensus354 99.14
PF02744166 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transf 99.1
PF11969116 DcpS_C: Scavenger mRNA decapping enzyme C-term bin 99.05
cd0046886 HIT_like HIT family: HIT (Histidine triad) protein 99.04
COG1085338 GalT Galactose-1-phosphate uridylyltransferase [En 98.77
TIGR00209347 galT_1 galactose-1-phosphate uridylyltransferase, 98.62
PRK11720346 galactose-1-phosphate uridylyltransferase; Provisi 98.57
PLN02643336 ADP-glucose phosphorylase 98.47
KOG3379|consensus150 98.47
cd00608329 GalT Galactose-1-phosphate uridyl transferase (Gal 98.44
cd01277103 HINT_subgroup HINT (histidine triad nucleotide-bin 98.31
KOG4359|consensus166 98.06
cd01275126 FHIT FHIT (fragile histidine family): FHIT protein 98.04
PRK10687119 purine nucleoside phosphoramidase; Provisional 97.84
PF04677121 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; In 97.83
cd01278104 aprataxin_related aprataxin related: Aprataxin, a 97.71
cd01276104 PKCI_related Protein Kinase C Interacting protein 97.64
COG4360298 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetr 97.64
PF0123098 HIT: HIT domain; InterPro: IPR001310 The Histidine 97.45
COG0537138 Hit Diadenosine tetraphosphate (Ap4A) hydrolase an 96.79
KOG2476|consensus 528 95.69
PF04677121 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; In 92.48
KOG2477|consensus 628 87.92
KOG3379|consensus150 86.46
KOG0562|consensus184 83.85
KOG4359|consensus166 81.78
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 Back     alignment and domain information 
Probab=100.00  E-value=1.4e-86  Score=648.65  Aligned_cols=277  Identities=54%  Similarity=1.065  Sum_probs=257.3

Q ss_pred             ccccceeecccCCcEEEEccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeCCCCccccCC
Q psy10444         48 HEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLENV  127 (341)
Q Consensus        48 ~~~~~~r~~pl~~~wviia~~R~~RP~~~~~~~~~~~~~~~~~~~CPFCpg~e~~~~~~~~~~~~vrvfpN~fPal~~~~  127 (341)
                      ..++|+|+|||||+|||||++|++|||+++.++...+..+.+++.||||||||+.+++++++|..+|||+||||||+++.
T Consensus         7 ~~~~~~R~dplt~~wViia~~R~~RP~~~~~~~~~~~~~~~~~~~CPfcpgne~~~~~~~~~w~~~rV~~N~fPal~~~~   86 (347)
T TIGR00209         7 VDHPHRRYNPLTDQWILVSPHRAKRPWQGQQETPAKQVLPAYDPDCYLCPGNKRVTGDLNPDYTGTYVFTNDFAALMSDT   86 (347)
T ss_pred             CCCCeeeeCCCCCcEEEEeCCcccCCCCccccccccccCCCCCCCCCCCCCCCCCCCCcCCCCceEEEEeCCCcccccCC
Confidence            45789999999999999999999999998755433333444567899999999998888777646999999999999887


Q ss_pred             CCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCccc
Q psy10444        128 PSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPH  207 (341)
Q Consensus       128 ~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HPH  207 (341)
                      +.+....+|+|++++|+|+||||||||+|+.+|++|+.+||..||++|++|+++|+++++||+||||+|+.|||||+|||
T Consensus        87 ~~~~~~~~~l~~~~~~~G~~eVii~sp~H~~~l~~m~~~~i~~v~~~~~~r~~~l~~~i~yv~iF~N~G~~~GaSl~HPH  166 (347)
T TIGR00209        87 PDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQIFENKGAAMGCSNPHPH  166 (347)
T ss_pred             CCCCcCCCcccccCCCCeeEEEEEeCCCccCChhHCCHHHHHHHHHHHHHHHHHHHhCCcEEEEEeecCcccCcCCCCCc
Confidence            66544446799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeecCCCCChHHHHHHHHHHHHHhcCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCCC
Q psy10444        208 CQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWP  287 (341)
Q Consensus       208 sQiia~p~vP~~~~~el~~~~~y~~~~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~p  287 (341)
                      |||||+|+||+.++.|++++++||+++|+|+||+|+++|+                ..++|+|++|++|+||+|++|++|
T Consensus       167 ~Qi~a~p~vP~~~~~e~~~~~~y~~~~g~clfcdIi~~E~----------------~~~~riV~End~fvAf~p~~p~~P  230 (347)
T TIGR00209       167 GQIWANSFLPNEVEREDRLQKEYFAEHKSPMLVDYVKREL----------------ADKSRTVVETEHWIAVVPYWAIWP  230 (347)
T ss_pred             eeeeeCCCCChHHHHHHHHHHHHHHHcCCccHHHHHHhHh----------------hcCCeEEEECCCEEEEeccCCCCC
Confidence            9999999999999999999999999999999999999998                668999999999999999999999


Q ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444        288 FETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC  340 (341)
Q Consensus       288 ~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~h~~  340 (341)
                      ||+||+||+|+++|.+|+++++.+|++++++++++|+++|+.++|||||||++
T Consensus       231 gh~lIiPKrH~~~~~dl~d~e~~~La~~lk~v~~~l~~~~~~~~pYn~~~h~~  283 (347)
T TIGR00209       231 FETLLLPKAHVLRITDLTDAQRSDLALILKKLTSKYDNLFETSFPYSMGWHGA  283 (347)
T ss_pred             CeEEEeeccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcceeEEec
Confidence            99999999999999999999999999999999999999998799999999996

This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM.
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information
>PLN02643 ADP-glucose phosphorylase Back     alignment and domain information
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate Back     alignment and domain information
>KOG2958|consensus Back     alignment and domain information
>COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] Back     alignment and domain information
>PF01087 GalP_UDP_transf: Galactose-1-phosphate uridyl transferase, N-terminal domain; InterPro: IPR005849 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism Back     alignment and domain information
>PF02744 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transferase, C-terminal domain; InterPro: IPR005850 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism Back     alignment and domain information
>cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome Back     alignment and domain information
>cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides Back     alignment and domain information
>cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides Back     alignment and domain information
>cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases Back     alignment and domain information
>COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK10687 purine nucleoside phosphoramidase; Provisional Back     alignment and domain information
>cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides Back     alignment and domain information
>PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms [] Back     alignment and domain information
>KOG3275|consensus Back     alignment and domain information
>KOG2958|consensus Back     alignment and domain information
>PF02744 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transferase, C-terminal domain; InterPro: IPR005850 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism Back     alignment and domain information
>PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B Back     alignment and domain information
>cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides Back     alignment and domain information
>COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] Back     alignment and domain information
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 Back     alignment and domain information
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information
>PLN02643 ADP-glucose phosphorylase Back     alignment and domain information
>KOG3379|consensus Back     alignment and domain information
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate Back     alignment and domain information
>cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides Back     alignment and domain information
>KOG4359|consensus Back     alignment and domain information
>cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases Back     alignment and domain information
>PRK10687 purine nucleoside phosphoramidase; Provisional Back     alignment and domain information
>PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues Back     alignment and domain information
>cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome Back     alignment and domain information
>cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides Back     alignment and domain information
>COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms [] Back     alignment and domain information
>COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG2476|consensus Back     alignment and domain information
>PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues Back     alignment and domain information
>KOG2477|consensus Back     alignment and domain information
>KOG3379|consensus Back     alignment and domain information
>KOG0562|consensus Back     alignment and domain information
>KOG4359|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query341
1hxp_A348 Nucleotide Transferase Length = 348 6e-81
1hxq_B348 The Structure Of Nucleotidylated Galactose-1-Phosph 6e-81
1gup_A348 Structure Of Nucleotidyltransferase Complexed With 6e-80
1z84_A351 X-Ray Structure Of Galt-Like Protein From Arabidops 1e-11
2h39_A351 Crystal Structure Of An Adp-Glucose Phosphorylase F 1e-10
>pdb|1HXP|A Chain A, Nucleotide Transferase Length = 348 Back     alignment and structure 
Iteration: 1

 Score =  297 bits (760), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 139/291 (47%), Positives = 184/291 (63%), Gaps = 18/291 (6%)
Query: 49  EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
           +H H RYNPL G+WILVSPHR KRPW G +E   +  +   DP   LC    R  G+ NP
Sbjct: 8   DHPHRRYNPLTGQWILVSPHRAKRPWEGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNP 67
Query: 109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
           +Y   +VF NDF AL+ + P  P   DPL +  +A G  +VICF P  + TLP +S+  +
Sbjct: 68  DYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAAL 127
Query: 169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQR 228
            +++ TW ++TA LGKTY WVQ+FENKGA MGCSNPHPH Q+WA+SFLPN    +D  Q+
Sbjct: 128 TEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAEREDRLQK 187
Query: 229 EYYQTHGKPLLMDYVSKELL-KRKQPTSVAVWLKELLKXXXXXXXXXXXXXXXXFWAEWP 287
           EY+     P+L+DYV +EL    +       WL  +                  +WA WP
Sbjct: 188 EYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVV-----------------PYWAAWP 230
Query: 288 FETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 338
           FET++LP+ HVLR TDL D QR++LA  +KK+T++YDNLF+ SFPYSMG+H
Sbjct: 231 FETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWH 281
>pdb|1HXQ|B Chain B, The Structure Of Nucleotidylated Galactose-1-Phosphate Uridylyltransferase From Escherichia Coli At 1.86 Angstroms Resolution Length = 348 Back     alignment and structure
>pdb|1GUP|A Chain A, Structure Of Nucleotidyltransferase Complexed With Udp- Galactose Length = 348 Back     alignment and structure
>pdb|1Z84|A Chain A, X-Ray Structure Of Galt-Like Protein From Arabidopsis Thaliana At5g18200 Length = 351 Back     alignment and structure
>pdb|2H39|A Chain A, Crystal Structure Of An Adp-Glucose Phosphorylase From Arabidopsis Thaliana With Bound Adp-Glucose Length = 351 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query341
1gup_A348 Galactose-1-phosphate uridylyltransferase; nucleot 1e-81
1gup_A348 Galactose-1-phosphate uridylyltransferase; nucleot 7e-06
1z84_A351 Galactose-1-phosphate uridyl transferase-like prot 5e-69
2oik_A154 Histidine triad (HIT) protein; HIT-like fold, stru 5e-04
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* Length = 348 Back     alignment and structure
 Score =  251 bits (641), Expect = 1e-81
 Identities = 143/290 (49%), Positives = 187/290 (64%), Gaps = 16/290 (5%)

Query: 49  EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
           +H H RYNPL G+WILVSPHR KRPW G +E   +  +   DP   LC    R  G+ NP
Sbjct: 8   DHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNP 67

Query: 109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
           +Y   +VF NDF AL+ + P  P   DPL +  +A G  +VICF P  + TLP +S+  +
Sbjct: 68  DYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAAL 127

Query: 169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPNLPRIKDIHQR 228
            +++ TW ++TA LGKTY WVQ+FENKGA MGCSNPHP  Q+WA+SFLPN    +D  Q+
Sbjct: 128 TEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQK 187

Query: 229 EYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEWPF 288
           EY+     P+L+DYV +EL                    R VV    W+ VVP+WA WPF
Sbjct: 188 EYFAEQKSPMLVDYVQRELADGS----------------RTVVETEHWLAVVPYWAAWPF 231

Query: 289 ETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFH 338
           ET++LP+ HVLR TDL D QR++LA  +KK+T++YDNLF+ SFPYSMG+H
Sbjct: 232 ETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWH 281
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* Length = 348 Back     alignment and structure
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* Length = 351 Back     alignment and structure
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query341
1gup_A348 Galactose-1-phosphate uridylyltransferase; nucleot 100.0
1z84_A351 Galactose-1-phosphate uridyl transferase-like prot 100.0
3o1c_A126 Histidine triad nucleotide-binding protein 1; hydr 99.81
3lb5_A161 HIT-like protein involved in cell-cycle regulatio; 99.8
3ksv_A149 Uncharacterized protein; HIT family, structural ge 99.8
1xqu_A147 HIT family hydrolase; protein STRU initiative, PSI 99.8
3imi_A147 HIT family protein; structural genomics, infectiou 99.79
3o0m_A149 HIT family protein; ssgcid, NIH, niaid, SBRI, UW, 99.79
4egu_A119 Histidine triad (HIT) protein; structural genomics 99.79
3l7x_A173 SMU.412C, putative HIT-like protein involved in ce 99.78
3oj7_A117 Putative histidine triad family protein; hydrolase 99.77
1y23_A145 HIT, histidine triad protein; HIT protein, PKCI-1, 99.76
2eo4_A149 150AA long hypothetical histidine triad nucleotid 99.76
3n1s_A119 HIT-like protein HINT; histidine triad nucleotide 99.74
3ano_A218 AP-4-A phosphorylase; diadenosine polyphosphate, H 99.7
3r6f_A135 HIT family protein; structural genomics, seattle s 99.7
3p0t_A138 Uncharacterized protein; ssgcid, HIT-like protein, 99.7
2oik_A154 Histidine triad (HIT) protein; HIT-like fold, stru 99.61
1fit_A147 FragIle histidine protein; FHIT, fragIle histidine 99.53
1ems_A440 Nitfhit, NIT-fragIle histidine triad fusion protei 99.51
3ohe_A137 Histidine triad (HIT) protein; structural genomics 98.9
3i24_A149 HIT family hydrolase; structural genomics, PSI-2, 98.88
3nrd_A135 Histidine triad (HIT) protein; structural genomics 98.65
3i4s_A149 Histidine triad protein; hydrolase, phosphatase, H 98.47
4egu_A119 Histidine triad (HIT) protein; structural genomics 98.23
3sp4_A 204 Aprataxin-like protein; HIT domain, zinc finger, D 98.18
3oj7_A117 Putative histidine triad family protein; hydrolase 98.15
1gup_A348 Galactose-1-phosphate uridylyltransferase; nucleot 98.13
1z84_A351 Galactose-1-phosphate uridyl transferase-like prot 98.05
3lb5_A161 HIT-like protein involved in cell-cycle regulatio; 97.95
3n1s_A119 HIT-like protein HINT; histidine triad nucleotide 97.9
3o0m_A149 HIT family protein; ssgcid, NIH, niaid, SBRI, UW, 97.8
3o1c_A126 Histidine triad nucleotide-binding protein 1; hydr 97.78
3imi_A147 HIT family protein; structural genomics, infectiou 97.77
2eo4_A149 150AA long hypothetical histidine triad nucleotid 97.75
1y23_A145 HIT, histidine triad protein; HIT protein, PKCI-1, 97.72
1xqu_A147 HIT family hydrolase; protein STRU initiative, PSI 97.71
1ems_A440 Nitfhit, NIT-fragIle histidine triad fusion protei 97.55
3l7x_A173 SMU.412C, putative HIT-like protein involved in ce 97.51
3ano_A218 AP-4-A phosphorylase; diadenosine polyphosphate, H 97.42
3r6f_A135 HIT family protein; structural genomics, seattle s 97.35
3ksv_A149 Uncharacterized protein; HIT family, structural ge 97.3
2oik_A154 Histidine triad (HIT) protein; HIT-like fold, stru 97.24
3p0t_A138 Uncharacterized protein; ssgcid, HIT-like protein, 97.2
1fit_A147 FragIle histidine protein; FHIT, fragIle histidine 96.89
3bl9_A301 Scavenger mRNA-decapping enzyme DCPS; ligand compl 95.28
1vlr_A350 MRNA decapping enzyme; 16740816, structural genomi 94.98
3i4s_A149 Histidine triad protein; hydrolase, phosphatase, H 94.43
3nrd_A135 Histidine triad (HIT) protein; structural genomics 94.18
3ohe_A137 Histidine triad (HIT) protein; structural genomics 93.21
3i24_A149 HIT family hydrolase; structural genomics, PSI-2, 91.92
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* Back     alignment and structure
Probab=100.00  E-value=9e-81  Score=607.95  Aligned_cols=278  Identities=51%  Similarity=1.019  Sum_probs=257.9

Q ss_pred             cccccceeecccCCcEEEEccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeCCCCccccC
Q psy10444         47 FHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLEN  126 (341)
Q Consensus        47 ~~~~~~~r~~pl~~~wviia~~R~~RP~~~~~~~~~~~~~~~~~~~CPFCpg~e~~~~~~~~~~~~vrvfpN~fPal~~~  126 (341)
                      +..|+|+|+|||||+|||||++|++|||+++.+.....+++.+++.|||||||++.+|..+++|..+|||+||||||+++
T Consensus         6 ~~~~~~~R~npltg~wv~vs~~R~~RP~~~~~~~~~~~~~p~~~~~CpfCpg~~~~t~~~~p~~~~~~v~~N~fpal~~~   85 (348)
T 1gup_A            6 PVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSD   85 (348)
T ss_dssp             TTTSCEEEEETTTTEEEEECTTGGGSCCCSCCCCCCCSCCCSCCTTCTTSTTCBCTTSCBCCCCSSCEEEECTTCSCCTT
T ss_pred             CCCCCceEECCcCCcEEEEeCCCCCCCCCCccccccccCCCCCCCCCCCCCCCcccCCCCCCCCceEEEecCCCceeccC
Confidence            34689999999999999999999999999987655444567777889999999999887788864499999999999987


Q ss_pred             CCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCcc
Q psy10444        127 VPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHP  206 (341)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HP  206 (341)
                      .+.....++++|+.++|+|+|+||||||+|+.+|++||.+++..+|.+|++|+++|+++++||+||||+|+.|||||.||
T Consensus        86 ~~~~~~~~~~l~~~~~~~G~~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~~~yV~iF~N~G~~~G~Sl~Hp  165 (348)
T 1gup_A           86 TPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHP  165 (348)
T ss_dssp             CCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSS
T ss_pred             CCCccccCccceecCccceeEEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhcCCEEEEecccCCcCCcCCCCC
Confidence            65443335679999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeecCCCCChHHHHHHHHHHHHHhcCCCccchhhhHHHhhccCCchhHHHHhhhccCCeEEEECCcEEEEecCCCCC
Q psy10444        207 HCQVWASSFLPNLPRIKDIHQREYYQTHGKPLLMDYVSKELLKRKQPTSVAVWLKELLKRDRVVVRNPDWVVVVPFWAEW  286 (341)
Q Consensus       207 HsQiia~p~vP~~~~~el~~~~~y~~~~g~c~fc~i~~~e~~~~~~~~~~~~~~~~~~~~~rvV~~~~~~~a~~p~~~~~  286 (341)
                      |+||||+|++|+.++.+++++++||++++.|+||+|+++|+                ..++|+|++|++|+||+|++|.+
T Consensus       166 H~Qi~a~~~~p~~~~~e~~~~~~y~~~~~~Cifc~ii~~E~----------------~~~~~iV~E~e~~~af~~~~p~~  229 (348)
T 1gup_A          166 GGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQREL----------------ADGSRTVVETEHWLAVVPYWAAW  229 (348)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHHHHHSSCHHHHHHHHHH----------------HHCTTEEEECSSEEEECCTTCCS
T ss_pred             ceeEEecccCChHHHHHHHHHHHHHhcCCCCchhHHHhhcc----------------ccCceEEEeCCcEEEEEccCCCC
Confidence            99999999999999999999999999999999999999988                55789999999999999999999


Q ss_pred             CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhHhCCCCCeEEEEecC
Q psy10444        287 PFETMILPRTHVLRFTDLDDQQRNNLADIIKKITTKYDNLFKVSFPYSMGFHVC  340 (341)
Q Consensus       287 p~e~~I~Pk~H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~g~h~~  340 (341)
                      |||+||+||+|+.+|.+|+++++.+|++++++++++|+++++.++|||||||++
T Consensus       230 pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~  283 (348)
T 1gup_A          230 PFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGA  283 (348)
T ss_dssp             TTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECC
T ss_pred             ceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence            999999999999999999999999999999999999999998667999999986
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* Back     alignment and structure
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A Back     alignment and structure
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} Back     alignment and structure
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0 Back     alignment and structure
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 Back     alignment and structure
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1 Back     alignment and structure
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} Back     alignment and structure
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} Back     alignment and structure
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} Back     alignment and structure
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A* Back     alignment and structure
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 Back     alignment and structure
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A* Back     alignment and structure
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} Back     alignment and structure
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} Back     alignment and structure
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} Back     alignment and structure
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 Back     alignment and structure
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Back     alignment and structure
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 Back     alignment and structure
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} Back     alignment and structure
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} Back     alignment and structure
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} Back     alignment and structure
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} Back     alignment and structure
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} Back     alignment and structure
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A* Back     alignment and structure
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A* Back     alignment and structure
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* Back     alignment and structure
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* Back     alignment and structure
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} Back     alignment and structure
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A* Back     alignment and structure
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} Back     alignment and structure
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A Back     alignment and structure
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1 Back     alignment and structure
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 Back     alignment and structure
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 Back     alignment and structure
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 Back     alignment and structure
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} Back     alignment and structure
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} Back     alignment and structure
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} Back     alignment and structure
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0 Back     alignment and structure
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 Back     alignment and structure
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} Back     alignment and structure
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Back     alignment and structure
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A* Back     alignment and structure
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B* Back     alignment and structure
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} Back     alignment and structure
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} Back     alignment and structure
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} Back     alignment and structure
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 341
d1guqa1176 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylylt 2e-68
d1z84a1173 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyl 2e-55
d1guqa2171 d.13.1.2 (A:178-348) Galactose-1-phosphate uridyly 1e-20
d1guqa2171 d.13.1.2 (A:178-348) Galactose-1-phosphate uridyly 6e-04
d1z84a2156 d.13.1.2 (A:196-351) Galactose-1-phosphate uridyly 2e-10
>d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Length = 176 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: HIT-like
superfamily: HIT-like
family: Hexose-1-phosphate uridylyltransferase
domain: Galactose-1-phosphate uridylyltransferase
species: Escherichia coli [TaxId: 562]

 Score =  210 bits (535), Expect = 2e-68
 Identities = 88/170 (51%), Positives = 113/170 (66%)

Query: 49  EHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNP 108
           +H H RYNPL G+WILVSPHR KRPW G +E   +  +   DP   LC    R  G+ NP
Sbjct: 7   DHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNP 66

Query: 109 NYDSVFVFNNDFPALLENVPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEI 168
           +Y   +VF NDF AL+ + P  P   DPL +  +A G  +VICF P  + TLP +S+  +
Sbjct: 67  DYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAAL 126

Query: 169 RKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHPHCQVWASSFLPN 218
            +++ TW ++TA LGKTY WVQ+FENKGA MGCSNPHP  Q+WA+SFLPN
Sbjct: 127 TEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPGGQIWANSFLPN 176
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 173 Back     information, alignment and structure
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Length = 171 Back     information, alignment and structure
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Length = 171 Back     information, alignment and structure
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 156 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query341
d1guqa1176 Galactose-1-phosphate uridylyltransferase {Escheri 100.0
d1z84a1173 Galactose-1-phosphate uridylyltransferase {Thale c 100.0
d1guqa2171 Galactose-1-phosphate uridylyltransferase {Escheri 99.94
d1z84a2156 Galactose-1-phosphate uridylyltransferase {Thale c 99.93
d1y23a_139 Hit {Bacillus subtilis [TaxId: 1423]} 99.68
d1xqua_113 Putative hydrolase {Clostridium thermocellum [TaxI 99.66
d1kpfa_111 Protein kinase C inhibitor-1, PKCI-1 {Human (Homo 99.65
d1emsa1160 NIT-FHIT fusion protein, C-terminal domain {Nemato 99.51
d1fita_146 FHIT (fragile histidine triad protein) {Human (Hom 99.47
d2oika1139 Histidine triad protein Mfla2506 {Methylobacillus 99.46
d1guqa2171 Galactose-1-phosphate uridylyltransferase {Escheri 98.4
d1z84a2156 Galactose-1-phosphate uridylyltransferase {Thale c 98.28
d1y23a_139 Hit {Bacillus subtilis [TaxId: 1423]} 97.96
d1vlra1192 mRNA decapping enzyme DcpS C-terminal domain {Mous 97.58
d1emsa1160 NIT-FHIT fusion protein, C-terminal domain {Nemato 97.48
d1xqua_113 Putative hydrolase {Clostridium thermocellum [TaxI 97.44
d1kpfa_111 Protein kinase C inhibitor-1, PKCI-1 {Human (Homo 97.2
d2oika1139 Histidine triad protein Mfla2506 {Methylobacillus 96.79
d1fita_146 FHIT (fragile histidine triad protein) {Human (Hom 96.76
>d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: HIT-like
superfamily: HIT-like
family: Hexose-1-phosphate uridylyltransferase
domain: Galactose-1-phosphate uridylyltransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-59  Score=414.86  Aligned_cols=172  Identities=51%  Similarity=1.030  Sum_probs=158.0

Q ss_pred             cccccceeecccCCcEEEEccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeeeeCCCCccccC
Q psy10444         47 FHEHQHVRYNPLKGEWILVSPHRMKRPWSGQEEKSNEDPIAEFDPKNPLCPTATRGNGEVNPNYDSVFVFNNDFPALLEN  126 (341)
Q Consensus        47 ~~~~~~~r~~pl~~~wviia~~R~~RP~~~~~~~~~~~~~~~~~~~CPFCpg~e~~~~~~~~~~~~vrvfpN~fPal~~~  126 (341)
                      +..++|+|+|||||+|||||++|++||+++..+.......+.+++.|||||||++.++..++++|++|||+|+||||+.+
T Consensus         5 ~~~~p~lR~dpLt~~wViia~~R~~RP~~~~~~~~~~~~~p~~~~~CPfCpgn~~~~~~~~~~~~~vrv~~N~~pal~~~   84 (176)
T d1guqa1           5 PVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSD   84 (176)
T ss_dssp             TTTSCEEEEETTTTEEEEECTTGGGSCCCSCCCCCCCSCCCSSCTTCTTSTTCBCTTSCBCCCCSSCEEEECTTCSCCTT
T ss_pred             CCCCCcccccccCCCEEEEeCCccCCCCCCcccCCcccCCCCCCCCCCCCCCcccccccCCCCccceeeecCCCcccccC
Confidence            44579999999999999999999999999976555445567788899999999999888888889999999999999987


Q ss_pred             CCCCCCCCCccccccCCCcceEEEEecCCCCCCcCCCCHHHHHHHHHHHHHHHHHhccCCceEEEeeecCcCCCCCCCcc
Q psy10444        127 VPSPPVQDDPLFKMGNASGVCKVICFHPKSNTTLPIMSIEEIRKVIDTWVDETASLGKTYEWVQIFENKGAIMGCSNPHP  206 (341)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ls~~~i~~vl~~~~~r~~~l~~~i~Yv~iFkN~G~~aGaSl~HP  206 (341)
                      .+......+++|++++|+|+||||||||+|+.+|++|+.++|..+|++|++|+++|+++++||+||||+|+.|||||.||
T Consensus        85 ~~~~~~~~~~l~~~~~~~G~heVIi~sp~H~~~l~~~~~~~i~~vl~a~~~R~~~l~~~i~yv~iFkN~G~~aGaSl~HP  164 (176)
T d1guqa1          85 TPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHP  164 (176)
T ss_dssp             CCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSS
T ss_pred             cccccccCCcccccCCCCCceeEEEECcccccChhhCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEeecCccccCCCCCC
Confidence            76655566789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeecCCCCC
Q psy10444        207 HCQVWASSFLPN  218 (341)
Q Consensus       207 HsQiia~p~vP~  218 (341)
                      ||||||+|+||.
T Consensus       165 H~QI~a~p~vP~  176 (176)
T d1guqa1         165 GGQIWANSFLPN  176 (176)
T ss_dssp             EEEEEEESSCCH
T ss_pred             CeeeeecCcCCC
Confidence            999999999984
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} Back     information, alignment and structure
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} Back     information, alignment and structure
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure