Psyllid ID: psy10510


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
MRRGCSQVECSEGTLTIRVAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP
cccccccEEccccEEEEEEEEEEEEccEEEEEEccccccEEEEEEEEEEcccccccEEEEcccHHHHHHHHHHHHHHHHcccccccccccc
cccccccEEEcccEEEEEEEEEEcccEEEEEEEEEcccEEEEEEEEEEccccccccEEEEcccHHHHHHHHHHHHHHHHcccccccccccc
mrrgcsqvecsegTLTIRVAVVLTKPILVYCTVVLTKPILVYCTvsqtiprggprsqiaipaqGMIEFRDALTDLLEEfgtedggykgelp
mrrgcsqvecsegtlTIRVAVVLTKPILVYCTVVLTKPILVYCTVsqtiprggprsqiAIPAQGMIEFRDALTDLLEEfgtedggykgelp
MRRGCSQVECSEGTLTIRVAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP
********ECSEGTLTIRVAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEF************
*****************RVAVVLTKPILVYCTVVLTKPILVYCTVSQT*****P**QIAIPAQGMIEFRDALTDLLEEFGT**********
**********SEGTLTIRVAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTED********
****CSQVECSEGTLTIRVAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDG*******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRRGCSQVECSEGTLTIRVAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query91 2.2.26 [Sep-21-2011]
Q00577 322 Transcriptional activator yes N/A 0.527 0.149 0.436 0.0002
P42669 321 Transcriptional activator yes N/A 0.527 0.149 0.436 0.0002
Q9UJV8347 Purine-rich element-bindi no N/A 0.461 0.121 0.415 0.0002
Q8R4E6350 Purine-rich element-bindi no N/A 0.461 0.12 0.415 0.0003
Q68A21 315 Transcriptional activator no N/A 0.285 0.082 0.653 0.0004
Q6PHK6297 Transcriptional activator no N/A 0.285 0.087 0.653 0.0004
Q8AVS4 328 Transcriptional activator N/A N/A 0.285 0.079 0.653 0.0004
Q6PAC9 323 Transcriptional activator N/A N/A 0.285 0.080 0.653 0.0004
Q96QR8 312 Transcriptional activator no N/A 0.285 0.083 0.653 0.0004
>sp|Q00577|PURA_HUMAN Transcriptional activator protein Pur-alpha OS=Homo sapiens GN=PURA PE=1 SV=2 Back     alignment and function desciption
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 7/55 (12%)

Query: 42  YCTVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP 91
           +  + QT+ RG      + Q IA+PAQG+IEFRDAL  L++++G E+     ELP
Sbjct: 167 FLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE--EPAELP 219




This is a probable transcription activator that specifically binds the purine-rich single strand of the PUR element located upstream of the MYC gene. May play a role in the initiation of DNA replication and in recombination.
Homo sapiens (taxid: 9606)
>sp|P42669|PURA_MOUSE Transcriptional activator protein Pur-alpha OS=Mus musculus GN=Pura PE=1 SV=1 Back     alignment and function description
>sp|Q9UJV8|PURG_HUMAN Purine-rich element-binding protein gamma OS=Homo sapiens GN=PURG PE=2 SV=1 Back     alignment and function description
>sp|Q8R4E6|PURG_MOUSE Purine-rich element-binding protein gamma OS=Mus musculus GN=Purg PE=1 SV=1 Back     alignment and function description
>sp|Q68A21|PURB_RAT Transcriptional activator protein Pur-beta OS=Rattus norvegicus GN=Purb PE=1 SV=3 Back     alignment and function description
>sp|Q6PHK6|PURB_DANRE Transcriptional activator protein Pur-beta OS=Danio rerio GN=purb PE=2 SV=3 Back     alignment and function description
>sp|Q8AVS4|PURBB_XENLA Transcriptional activator protein Pur-beta-B OS=Xenopus laevis GN=purb-b PE=2 SV=3 Back     alignment and function description
>sp|Q6PAC9|PURBA_XENLA Transcriptional activator protein Pur-beta-A OS=Xenopus laevis GN=purb-a PE=2 SV=3 Back     alignment and function description
>sp|Q96QR8|PURB_HUMAN Transcriptional activator protein Pur-beta OS=Homo sapiens GN=PURB PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query91
242020726 226 pur-alpha, putative [Pediculus humanus c 0.549 0.221 0.94 3e-20
312375108 354 hypothetical protein AND_14541 [Anophele 0.549 0.141 0.9 2e-19
158293209 294 AGAP010564-PA [Anopheles gambiae str. PE 0.549 0.170 0.9 2e-19
157131521 274 pur-alpha [Aedes aegypti] gi|108871498|g 0.549 0.182 0.88 5e-19
321478130 220 hypothetical protein DAPPUDRAFT_95385 [D 0.769 0.318 0.671 6e-19
157123034 269 pur-alpha [Aedes aegypti] gi|108874553|g 0.549 0.185 0.88 1e-18
427793839 291 Putative transcriptional regulator of th 0.549 0.171 0.86 1e-18
307190558 298 Transcriptional activator protein Pur-al 0.549 0.167 0.84 2e-18
156538218 324 PREDICTED: transcriptional activator pro 0.549 0.154 0.84 2e-18
170035946 273 transcriptional activator protein Pur-al 0.549 0.183 0.88 2e-18
>gi|242020726|ref|XP_002430803.1| pur-alpha, putative [Pediculus humanus corporis] gi|212516000|gb|EEB18065.1| pur-alpha, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/50 (94%), Positives = 48/50 (96%)

Query: 42  YCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP 91
           +  VSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP
Sbjct: 98  FLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP 147




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375108|gb|EFR22538.1| hypothetical protein AND_14541 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|158293209|ref|XP_314537.4| AGAP010564-PA [Anopheles gambiae str. PEST] gi|157016848|gb|EAA09967.5| AGAP010564-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|157131521|ref|XP_001662270.1| pur-alpha [Aedes aegypti] gi|108871498|gb|EAT35723.1| AAEL012134-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|321478130|gb|EFX89088.1| hypothetical protein DAPPUDRAFT_95385 [Daphnia pulex] Back     alignment and taxonomy information
>gi|157123034|ref|XP_001659993.1| pur-alpha [Aedes aegypti] gi|108874553|gb|EAT38778.1| AAEL009370-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|427793839|gb|JAA62371.1| Putative transcriptional regulator of the pur family single-stranded-dna-binding protein, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|307190558|gb|EFN74545.1| Transcriptional activator protein Pur-alpha [Camponotus floridanus] Back     alignment and taxonomy information
>gi|156538218|ref|XP_001601888.1| PREDICTED: transcriptional activator protein Pur-alpha-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|170035946|ref|XP_001845827.1| transcriptional activator protein Pur-alpha [Culex quinquefasciatus] gi|167878426|gb|EDS41809.1| transcriptional activator protein Pur-alpha [Culex quinquefasciatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query91
FB|FBgn0022361275 Pur-alpha "Purine-rich binding 0.549 0.181 0.803 6.7e-17
ZFIN|ZDB-GENE-040624-8287 pura "purine-rich element bind 0.527 0.167 0.454 2.4e-05
ZFIN|ZDB-GENE-040426-1478297 purbb "purine-rich element bin 0.450 0.138 0.5 2.5e-05
UNIPROTKB|Q9MYX6 321 Q9MYX6 "DNA binding protein pu 0.527 0.149 0.436 8.1e-05
MGI|MGI:103079 321 Pura "purine rich element bind 0.527 0.149 0.436 8.1e-05
UNIPROTKB|E1BMW9 322 PURA "Uncharacterized protein" 0.527 0.149 0.436 8.1e-05
UNIPROTKB|Q00577 322 PURA "Transcriptional activato 0.527 0.149 0.436 8.1e-05
UNIPROTKB|I3LCN6 322 PURA "Uncharacterized protein" 0.527 0.149 0.436 8.1e-05
UNIPROTKB|G3N0W8 304 PURB "Uncharacterized protein" 0.516 0.154 0.428 0.00012
UNIPROTKB|Q96QR8 312 PURB "Transcriptional activato 0.406 0.118 0.538 0.00016
FB|FBgn0022361 Pur-alpha "Purine-rich binding protein-alpha" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 41/51 (80%), Positives = 45/51 (88%)

Query:    42 YCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGG-YKGELP 91
             +  VSQTI RGGPRSQIA+PAQGMIEFRDALTDLLEEFG  DGG +KG+LP
Sbjct:   145 FLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGANDGGRFKGDLP 195




GO:0003697 "single-stranded DNA binding" evidence=NAS
GO:0003677 "DNA binding" evidence=ISS
GO:0043565 "sequence-specific DNA binding" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0031935 "regulation of chromatin silencing" evidence=IMP
ZFIN|ZDB-GENE-040624-8 pura "purine-rich element binding protein A" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1478 purbb "purine-rich element binding protein Bb" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q9MYX6 Q9MYX6 "DNA binding protein pur-alpha" [Ovis aries (taxid:9940)] Back     alignment and assigned GO terms
MGI|MGI:103079 Pura "purine rich element binding protein A" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMW9 PURA "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q00577 PURA "Transcriptional activator protein Pur-alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LCN6 PURA "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|G3N0W8 PURB "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q96QR8 PURB "Transcriptional activator protein Pur-beta" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query91
pfam04845218 pfam04845, PurA, PurA ssDNA and RNA-binding protei 6e-18
smart0071263 smart00712, PUR, DNA/RNA-binding repeats in PUR-al 7e-10
>gnl|CDD|218289 pfam04845, PurA, PurA ssDNA and RNA-binding protein Back     alignment and domain information
 Score = 74.1 bits (182), Expect = 6e-18
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)

Query: 45  VSQTIPRG--GPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGG-YKGELP 91
           ++QT+ RG  G R QIA+PAQGMIEFRDALTDL+E++G  D      ELP
Sbjct: 110 IAQTVMRGGSGQRQQIALPAQGMIEFRDALTDLIEDYGEGDEEDEPAELP 159


This family represents most of the length of the protein. Length = 218

>gnl|CDD|197840 smart00712, PUR, DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 91
PF04845218 PurA: PurA ssDNA and RNA-binding protein; InterPro 99.96
smart0071263 PUR DNA/RNA-binding repeats in PUR-alpha/beta/gamm 99.94
KOG3074|consensus263 99.93
PF04845 218 PurA: PurA ssDNA and RNA-binding protein; InterPro 99.87
KOG3074|consensus 263 99.86
PF11680124 DUF3276: Protein of unknown function (DUF3276); In 97.89
>PF04845 PurA: PurA ssDNA and RNA-binding protein; InterPro: IPR006628 The Pur protein family consists of four known members in humans and is strongly conserved throughout evolution Back     alignment and domain information
Probab=99.96  E-value=4.2e-29  Score=191.31  Aligned_cols=73  Identities=49%  Similarity=0.706  Sum_probs=57.3

Q ss_pred             EeEeeeeCceEEEEEcccCCCcceEEEEEeccCC--CCcceEEEecchHHHHHHHHHHHHHHhcCCC-CCCCCCCC
Q psy10510         19 VAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRG--GPRSQIAIPAQGMIEFRDALTDLLEEFGTED-GGYKGELP   91 (91)
Q Consensus        19 ~~~v~~~e~KrFY~DlkeN~RGRFLRIsE~~~rG--g~RsqIalPaqg~~EFRdaL~dlie~yg~~~-~~~~~~Lp   91 (91)
                      .++++..++|+||||||||+|||||||||+.++|  |+|+||+||||||+||+|||++|||+||.++ ++++++||
T Consensus        84 kSe~i~~e~r~yylDLKEN~RGrfLRisq~~~~~~~~~R~qIaiPa~G~~ef~~al~~lid~~g~~~~~~~~~~Lp  159 (218)
T PF04845_consen   84 KSEKINVENRRYYLDLKENSRGRFLRISQTVSRGPRGRRSQIAIPAQGMIEFRDALTDLIDEFGEDDEEDEQGELP  159 (218)
T ss_dssp             EEEEEEETTEEEEEEEEEETTEEEEEEEEEETTT----EEEEEEEGGGHHHHHHHHHHHHHHH-------------
T ss_pred             eehheeeccceEEEEcccccCcceEEEEEeeccCCCCCccEEEEehHHHHHHHHHHHHHHHHhcCcccccccccCC
Confidence            5789999999999999999999999999999888  8999999999999999999999999999987 45777787



Pur-alpha is a highly conserved, sequence-specific DNA- and RNA-binding protein involved in diverse cellular and viral functions including transcription, replication, and cell growth. Pur-alpha has a modular structure with alternating three basic aromatic class I and two acidic leucine-rich class II repeats in the central region of the protein []. In addition to its involved in basic cellular function, Pur-alpha, has been implicated in the development of blood cells and cells of the central nervous system; it has also been implicated in the inhibition of oncogenic transformation and along with Pur-beta in myelodysplastic syndrome progressing to acute myelogenous leukemia. Pur-alpha can influence viral interaction through functional associations, for example with the Tat protein and TAR RNA of HIV-1, and with large T-antigen and DNA regulatory regions of JC virus. JC virus causes opportunistic infections in the brains of certain HIV-1-infected individuals [].; PDB: 3K44_A.

>smart00712 PUR DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria Back     alignment and domain information
>KOG3074|consensus Back     alignment and domain information
>PF04845 PurA: PurA ssDNA and RNA-binding protein; InterPro: IPR006628 The Pur protein family consists of four known members in humans and is strongly conserved throughout evolution Back     alignment and domain information
>KOG3074|consensus Back     alignment and domain information
>PF11680 DUF3276: Protein of unknown function (DUF3276); InterPro: IPR021694 This bacterial family of proteins has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query91
3k44_A146 Crystal Structure Of Drosophila Melanogaster Pur-Al 8e-15
>pdb|3K44|A Chain A, Crystal Structure Of Drosophila Melanogaster Pur-Alpha Length = 146 Back     alignment and structure

Iteration: 1

Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 34/41 (82%), Positives = 36/41 (87%) Query: 42 YCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTE 82 + VSQTI RGGPRSQIA+PAQGMIEFRDALTDLLEEFG Sbjct: 106 FLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGAN 146 Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query91
3k44_A146 Purine-rich binding protein-alpha, isoform B; PUR- 6e-16
3k44_A146 Purine-rich binding protein-alpha, isoform B; PUR- 4e-04
>3k44_A Purine-rich binding protein-alpha, isoform B; PUR-alpha, PUR repeat, PUR domain, whirly fold, DNA binding protein, RNA binding protein; 2.10A {Drosophila melanogaster} Length = 146 Back     alignment and structure
 Score = 67.0 bits (163), Expect = 6e-16
 Identities = 34/41 (82%), Positives = 36/41 (87%)

Query: 42  YCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTE 82
           +  VSQTI RGGPRSQIA+PAQGMIEFRDALTDLLEEFG  
Sbjct: 106 FLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGAN 146


>3k44_A Purine-rich binding protein-alpha, isoform B; PUR-alpha, PUR repeat, PUR domain, whirly fold, DNA binding protein, RNA binding protein; 2.10A {Drosophila melanogaster} Length = 146 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query91
3k44_A146 Purine-rich binding protein-alpha, isoform B; PUR- 99.95
3k44_A146 Purine-rich binding protein-alpha, isoform B; PUR- 99.95
3n8b_A98 Uncharacterized protein; PUR-alpha, PUR repeat, PU 98.69
3nm7_A127 Uncharacterized protein; PUR-alpha, PUR repeat, PU 97.47
>3k44_A Purine-rich binding protein-alpha, isoform B; PUR-alpha, PUR repeat, PUR domain, whirly fold, DNA binding protein, RNA binding protein; 2.10A {Drosophila melanogaster} Back     alignment and structure
Probab=99.95  E-value=8.7e-29  Score=178.61  Aligned_cols=72  Identities=21%  Similarity=0.224  Sum_probs=65.7

Q ss_pred             EeEeeeeCceEEEEEcccCCCcceEEEEEeccCCCCcceEEEecchHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q psy10510         19 VAVVLTKPILVYCTVVLTKPILVYCTVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP   91 (91)
Q Consensus        19 ~~~v~~~e~KrFY~DlkeN~RGRFLRIsE~~~rGg~RsqIalPaqg~~EFRdaL~dlie~yg~~~~~~~~~Lp   91 (91)
                      .++.+..|+|+||||||||+|||||||||++ ++|+||||+||++||+||||+|++|||.|+..+++.+.+||
T Consensus         6 ~S~~i~ie~KrfYlDlKeN~RGrfLkIsE~~-~~g~rs~I~lp~~~~~efrd~L~~~ie~~~~~g~~~~~~~~   77 (146)
T 3k44_A            6 ATKMLQIQSKRFYLDVKQNRRGRFIKVAEIG-ADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPNTDNLP   77 (146)
T ss_dssp             EEEEEEETTEEEEEEEEEETTEEEEEEEEEC-TTCCEEEEEECHHHHHHHHHHHHHHHHHHHTSCSCCSSCCC
T ss_pred             cceeEEEeceEEEEEecccCCeEEEEEEEec-CCCcceEEEEEhhHHHHHHHHHHHHHHHHHhcCCCccccCC
Confidence            3568899999999999999999999999996 46899999999999999999999999999988777777776



>3k44_A Purine-rich binding protein-alpha, isoform B; PUR-alpha, PUR repeat, PUR domain, whirly fold, DNA binding protein, RNA binding protein; 2.10A {Drosophila melanogaster} Back     alignment and structure
>3n8b_A Uncharacterized protein; PUR-alpha, PUR repeat, PUR domain, whirly fold, RNA binding, binding, nucleic acid binding protein; HET: MSE; 1.90A {Borrelia burgdorferi} Back     alignment and structure
>3nm7_A Uncharacterized protein; PUR-alpha, PUR repeat, PUR domain, PURA, whirly fold, RNA BI DNA binding, nucleic acid binding protein; 2.20A {Borrelia burgdorferi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00