Psyllid ID: psy10515


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
MKTQIKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP
cccccHHHHHccHHHHHHHHHHHHHcEEEcccccccccccccccccccEEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHHHHHHHHHHHcccccccc
cccEEEEHcHccHHHHHHHHHHHHHHHHEcccccccHcHHcccccccEEEEcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcHcccHHHcccccccccEEEHHHHHHHHHHHHHHHcHHccccc
mktqikiadclSLRDFVREVCIAQSAIVlnkngcgtqgikkrlpehnkiiaqpdiksslynfhAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSalpllhhpdkmIQMFTIMTKIAQGMYLLCDHIVWFGRVGlmemdtvhwtgtanRYFFYSLVLMLARDIYEILQLYDVTkrsyrkvplgelvcsnksLFLDLFKNVFDVlipatglgyvkfspgavgffGVLSSAAALYTIVNPMYKMIP
mktqikiadclslRDFVREVCIAQSaivlnkngcgtqGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP
MKTQIKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP
****IKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYK***
****IKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHS*********IKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLY*****************SNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMI*
MKTQIKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP
*KTQIKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiii
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MKTQIKIADCLSLRDFVREVCIAQSAIVLNKNGCGTQGIKKRLPEHNKIIAQPDIKSSLYNFHAENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query280 2.2.26 [Sep-21-2011]
Q9Z210259 Peroxisomal membrane prot yes N/A 0.710 0.768 0.266 4e-21
Q148K5258 Peroxisomal membrane prot yes N/A 0.710 0.771 0.267 5e-20
Q5RFI0259 Peroxisomal membrane prot yes N/A 0.710 0.768 0.258 7e-20
O96011259 Peroxisomal membrane prot yes N/A 0.710 0.768 0.258 2e-19
O75192247 Peroxisomal membrane prot no N/A 0.628 0.712 0.300 2e-17
O70597246 Peroxisomal membrane prot no N/A 0.628 0.715 0.301 4e-17
Q9Z211246 Peroxisomal membrane prot no N/A 0.628 0.715 0.301 6e-16
Q0VCP2247 Peroxisomal membrane prot no N/A 0.628 0.712 0.300 9e-11
Q96HA9241 Peroxisomal membrane prot no N/A 0.475 0.551 0.227 3e-05
Q54H86254 Peroxisomal membrane prot yes N/A 0.610 0.673 0.218 0.0001
>sp|Q9Z210|PX11B_MOUSE Peroxisomal membrane protein 11B OS=Mus musculus GN=Pex11b PE=2 SV=1 Back     alignment and function desciption
 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 41/240 (17%)

Query: 81  VQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLHHPD 140
            Q+A  ++    ++H   S    ++I+ LE HL++ R+LLRLG   DAL SA   +H  D
Sbjct: 21  AQYACSLLGHALQRHG-ASPELQKQIRQLEGHLSLGRKLLRLGNSTDALESAKRAVHLSD 79

Query: 141 KMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLM-EMDTVHWTGTANRYFFYSLVLMLARDI 199
            +++    ++ + + +Y  CD+++W G+ GL   +D   W   + RY+ +SL++ L+RD 
Sbjct: 80  VVLRFCITVSHLNRALYFACDNVLWAGKSGLAPRVDQEKWAQRSFRYYLFSLIMNLSRDA 139

Query: 200 YEILQLYDVTKRSY---------------------------------------RKVPLGE 220
           YEI  L +    +Y                                       R + L  
Sbjct: 140 YEIRLLMEQETSAYSRRMKVSGVGVSGGVETVGPGGPGTPGGSLPQLALKFRLRILLLAR 199

Query: 221 LVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP 280
           ++  +  L LD+ +N  D+ IP   LG  +  PG VG  G++SS  ++ T++ P  ++ P
Sbjct: 200 VLRGHPPLLLDVLRNACDLFIPLDKLGLWRCGPGIVGLCGLISSILSILTLICPWLRLKP 259




Involved in peroxisomal proliferation. May regulate peroxisomes division by recruiting the dynamin-related GTPase DNM1L to the peroxisomal membrane.
Mus musculus (taxid: 10090)
>sp|Q148K5|PX11B_BOVIN Peroxisomal membrane protein 11B OS=Bos taurus GN=PEX11B PE=2 SV=1 Back     alignment and function description
>sp|Q5RFI0|PX11B_PONAB Peroxisomal membrane protein 11B OS=Pongo abelii GN=PEX11B PE=2 SV=1 Back     alignment and function description
>sp|O96011|PX11B_HUMAN Peroxisomal membrane protein 11B OS=Homo sapiens GN=PEX11B PE=1 SV=1 Back     alignment and function description
>sp|O75192|PX11A_HUMAN Peroxisomal membrane protein 11A OS=Homo sapiens GN=PEX11A PE=1 SV=1 Back     alignment and function description
>sp|O70597|PX11A_RAT Peroxisomal membrane protein 11A OS=Rattus norvegicus GN=Pex11a PE=1 SV=1 Back     alignment and function description
>sp|Q9Z211|PX11A_MOUSE Peroxisomal membrane protein 11A OS=Mus musculus GN=Pex11a PE=2 SV=1 Back     alignment and function description
>sp|Q0VCP2|PX11A_BOVIN Peroxisomal membrane protein 11A OS=Bos taurus GN=PEX11A PE=2 SV=1 Back     alignment and function description
>sp|Q96HA9|PX11C_HUMAN Peroxisomal membrane protein 11C OS=Homo sapiens GN=PEX11G PE=1 SV=1 Back     alignment and function description
>sp|Q54H86|PEX11_DICDI Peroxisomal membrane protein 11 homolog OS=Dictyostelium discoideum GN=pex11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query280
383850840232 PREDICTED: peroxisomal membrane protein 0.735 0.887 0.402 2e-43
307180349220 Peroxisomal membrane protein 11B [Campon 0.739 0.940 0.408 4e-43
332017897201 Peroxisomal membrane protein 11B [Acromy 0.710 0.990 0.400 1e-41
66505000232 PREDICTED: peroxisomal membrane protein 0.735 0.887 0.380 5e-41
350400633232 PREDICTED: peroxisomal membrane protein 0.739 0.892 0.386 8e-41
322794347234 hypothetical protein SINV_10043 [Solenop 0.735 0.880 0.358 3e-39
357601984238 hypothetical protein KGM_16453 [Danaus p 0.757 0.890 0.363 1e-37
242009349239 Peroxisomal membrane protein 11A, putati 0.732 0.857 0.343 1e-37
195121628241 GI20418 [Drosophila mojavensis] gi|19391 0.753 0.875 0.347 4e-37
195488397243 GE14109 [Drosophila yakuba] gi|194178399 0.760 0.876 0.347 1e-36
>gi|383850840|ref|XP_003700982.1| PREDICTED: peroxisomal membrane protein 11B-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 141/221 (63%), Gaps = 15/221 (6%)

Query: 73  GSCSLILLVQFASRMVWDITEK-HSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYS 131
           G   +I L+Q+ SR  W   +  HS  ++ S E ++ LE+  + FR+LLRLGRC D+LYS
Sbjct: 13  GRDKIIRLLQYGSRTYWYYAQNAHS--TQQSAEILRSLEYTFSSFRKLLRLGRCLDSLYS 70

Query: 132 ALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANRYFFYSL 191
           AL ++ +PD +I++   ++KIA  ++LL DHI+W GRVGL+ ++   W+ TAN+Y+  S+
Sbjct: 71  ALKMMKYPDIVIRVTLTLSKIANALFLLADHIIWIGRVGLLRVNIEKWSKTANKYWLMSI 130

Query: 192 VLMLARDIYEILQLY------------DVTKRSYRKVPLGELVCSNKSLFLDLFKNVFDV 239
           ++ L RDIYEI+ +             D+T   +++  L   + ++K + +D  KN  D+
Sbjct: 131 IMNLVRDIYEIITILECEGKSVLMKKSDLTPNIWKQYKLLFHLRNHKDVVMDAIKNGCDL 190

Query: 240 LIPATGLGYVKFSPGAVGFFGVLSSAAALYTIVNPMYKMIP 280
            IP T LG+ KF+PG +G FGV+SS   LYT+V+P+YK+ P
Sbjct: 191 FIPLTALGFTKFTPGTIGMFGVISSIVGLYTLVHPLYKLTP 231




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180349|gb|EFN68375.1| Peroxisomal membrane protein 11B [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332017897|gb|EGI58557.1| Peroxisomal membrane protein 11B [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|66505000|ref|XP_623134.1| PREDICTED: peroxisomal membrane protein 11B-like isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|350400633|ref|XP_003485904.1| PREDICTED: peroxisomal membrane protein 11B-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|322794347|gb|EFZ17455.1| hypothetical protein SINV_10043 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|357601984|gb|EHJ63227.1| hypothetical protein KGM_16453 [Danaus plexippus] Back     alignment and taxonomy information
>gi|242009349|ref|XP_002425450.1| Peroxisomal membrane protein 11A, putative [Pediculus humanus corporis] gi|212509286|gb|EEB12712.1| Peroxisomal membrane protein 11A, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|195121628|ref|XP_002005322.1| GI20418 [Drosophila mojavensis] gi|193910390|gb|EDW09257.1| GI20418 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195488397|ref|XP_002092298.1| GE14109 [Drosophila yakuba] gi|194178399|gb|EDW92010.1| GE14109 [Drosophila yakuba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query280
FB|FBgn0034058241 Pex11 "Peroxin 11" [Drosophila 0.503 0.585 0.384 1.9e-37
UNIPROTKB|J9NWL2284 PEX11B "Uncharacterized protei 0.614 0.605 0.309 1.5e-26
UNIPROTKB|E2QYT4259 PEX11B "Uncharacterized protei 0.467 0.505 0.330 8.2e-26
UNIPROTKB|Q5RFI0259 PEX11B "Peroxisomal membrane p 0.446 0.482 0.330 2.1e-25
MGI|MGI:1338882259 Pex11b "peroxisomal biogenesis 0.475 0.513 0.318 2.1e-25
UNIPROTKB|F1SDE2259 PEX11B "Uncharacterized protei 0.446 0.482 0.338 2.7e-25
UNIPROTKB|Q148K5258 PEX11B "Peroxisomal membrane p 0.446 0.484 0.338 2.7e-25
ZFIN|ZDB-GENE-050419-121246 pex11a "peroxisomal biogenesis 0.410 0.467 0.318 2.7e-25
RGD|1310353258 Pex11b "peroxisomal biogenesis 0.446 0.484 0.330 4.4e-25
UNIPROTKB|O96011259 PEX11B "Peroxisomal membrane p 0.446 0.482 0.330 5.6e-25
FB|FBgn0034058 Pex11 "Peroxin 11" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 298 (110.0 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 55/143 (38%), Positives = 88/143 (61%)

Query:    67 QLNTLFGSCSLIL-LVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRC 125
             QLN   G    I  L+Q+ASR +WD  E  +  +   V+  K +E+ L+ FR+LLR G+C
Sbjct:     6 QLNNQAGGRDKIARLIQYASRAMWDSLESAN-SNPALVDNFKTVEYILSTFRKLLRFGKC 64

Query:   126 FDALYSALPLLHHPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGTANR 185
              D  Y AL  +HHPD  I++   ++K++Q ++L  DH +W  R GL  ++   W+  AN+
Sbjct:    65 VDVFYGALKTIHHPDLNIRVTLTLSKLSQSLFLFADHFLWLARTGLTAVNAKRWSNIANK 124

Query:   186 YFFYSLVLMLARDIYEILQLYDV 208
             Y+ +S+++ L RD YEIL++ D+
Sbjct:   125 YWLFSIIMNLCRDFYEILRVLDL 147


GO:0007031 "peroxisome organization" evidence=ISS;IMP
GO:0016559 "peroxisome fission" evidence=IEA
GO:0005779 "integral to peroxisomal membrane" evidence=IEA
UNIPROTKB|J9NWL2 PEX11B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2QYT4 PEX11B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5RFI0 PEX11B "Peroxisomal membrane protein 11B" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
MGI|MGI:1338882 Pex11b "peroxisomal biogenesis factor 11 beta" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SDE2 PEX11B "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q148K5 PEX11B "Peroxisomal membrane protein 11B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050419-121 pex11a "peroxisomal biogenesis factor 11 alpha" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1310353 Pex11b "peroxisomal biogenesis factor 11 beta" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O96011 PEX11B "Peroxisomal membrane protein 11B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query280
pfam05648225 pfam05648, PEX11, Peroxisomal biogenesis factor 11 1e-38
>gnl|CDD|218675 pfam05648, PEX11, Peroxisomal biogenesis factor 11 (PEX11) Back     alignment and domain information
 Score =  134 bits (340), Expect = 1e-38
 Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)

Query: 77  LILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLL 136
           L+  +Q+ASR++     +    S   + ++K LE   ++ R+LLRLG+  + L +A    
Sbjct: 17  LLRTLQYASRLLAWYLYR-KGSSPELIARLKNLESQFSLSRKLLRLGKFLEHLQAAAKYY 75

Query: 137 H--HPDKMIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTVHWTGT-ANRYFFYSLVL 193
               PD ++++  ++  +   +YL  DHI+W  ++GL+++         ++R++ + L+L
Sbjct: 76  DNKLPDPVLRLLAVLRNLGYALYLPFDHILWLAKIGLLKVKNAKRWSRISSRFWLFGLLL 135

Query: 194 MLARDIYEILQLYD----VTKRSYRKVPLGELVCS-------NKSLFLDLFKNVFDVLIP 242
            L RD+ E+ QL +    + K    +                  +  LDL KN+ D+ I 
Sbjct: 136 SLVRDLRELRQLQEKEKKLKKEKDSEGESTSERKLLKKILKKRPAALLDLVKNLCDLFIA 195

Query: 243 ATGLGYVKFSPGAVGFFGVLSSAAALYTIV 272
              LG ++F+ G VG  G +SS   +Y + 
Sbjct: 196 LNSLGILRFNDGLVGLAGTISSLIGIYQLW 225


This family consists of several peroxisomal biogenesis factor 11 (PEX11) proteins from several eukaryotic species. The PEX11 peroxisomal membrane proteins promote peroxisome division in multiple eukaryotes. Length = 225

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 280
PF05648223 PEX11: Peroxisomal biogenesis factor 11 (PEX11) 100.0
KOG4186|consensus233 100.0
>PF05648 PEX11: Peroxisomal biogenesis factor 11 (PEX11) Back     alignment and domain information
Probab=100.00  E-value=1e-44  Score=319.05  Aligned_cols=208  Identities=30%  Similarity=0.515  Sum_probs=188.5

Q ss_pred             hhhhccCCcchHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHhHhHHHHHHHhhCCHHHHHHHhhccC--CCch
Q psy10515         64 AENQLNTLFGSCSLILLVQFASRMVWDITEKHSLMSKHSVEKIKLLEFHLAMFRRLLRLGRCFDALYSALPLLH--HPDK  141 (280)
Q Consensus        64 ~~~~lst~~GRDKllR~lQY~skll~~~l~~~~l~~~~~~~~l~~L~s~ls~aRk~fRL~k~l~~l~~~~~~~~--~~d~  141 (280)
                      +.+|+++++||||++|++||++++++|++.+++ +++++.++++++++++|++||+||+||++++++++.+...  .+|.
T Consensus         4 ~~~~l~~~~GrDK~~r~~qy~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ls~aRk~~Rl~k~l~~l~~~~~~~~~~~~d~   82 (223)
T PF05648_consen    4 FVRFLSSTDGRDKLLRLLQYSSKFLAWYLARRG-PSKELSKRLKALSSQLSDARKLFRLGKFLPMLQAARKYIKKKPSDQ   82 (223)
T ss_pred             HHHHHccchhhHHHHHHHHHHHHHHHHHHHccC-CChHHHHHHHHHHHHhhhHHHHHHHHccHHHHHHHHHhhccCCccH
Confidence            333999999999999999999999999998877 6789999999999999999999999999999999998643  3478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------c
Q psy10515        142 MIQMFTIMTKIAQGMYLLCDHIVWFGRVGLMEMDTV-HWTGTANRYFFYSLVLMLARDIYEILQLYDVTKRSY------R  214 (280)
Q Consensus       142 ~~~~l~~l~~~~~~lY~~~D~i~wL~~~Gil~~~~~-k~~~~s~~fW~~~lv~sli~~l~~L~~l~~~~~~~k------~  214 (280)
                      +.+++++++++++++|+++||++|++++|+++.+.. ++.++|++||++++++++++++++++.+.+++++.+      +
T Consensus        83 ~~~~l~~l~~~~~~~y~~~D~~~wl~~~gl~~~~~~~~~~~~s~~~W~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  162 (223)
T PF05648_consen   83 VLRILEILSNLFMFLYYLLDNLVWLSKLGLLPNKSKKKWSRWSNRFWFASLVLSLVRDLRELRRLRQKERSLKKQLKEKD  162 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence            999999999999999999999999999999997754 999999999999999999999999988877665421      1


Q ss_pred             c-c--cchhhhhhhhhHHHHHHHHhhhHHHhhhccCCcccCchhHhHHHHHHHHHHHHHhc
Q psy10515        215 K-V--PLGELVCSNKSLFLDLFKNVFDVLIPATGLGYVKFSPGAVGFFGVLSSAAALYTIV  272 (280)
Q Consensus       215 ~-~--~~~~~~~~~~~~~l~lv~~~~Dl~i~~~~lg~~~~~~g~VG~~G~iSSlig~y~~W  272 (280)
                      + +  ++.++++++++..+++++|+||+++|++++|+.+++|++||++|++||++|+|++|
T Consensus       163 ~~~~~~l~~~~~~~~~~~l~lv~~~~D~~~~~~~l~~~~~~~~~vg~~G~iSs~i~~~~~W  223 (223)
T PF05648_consen  163 ENEEEKLKKLRKERRALLLDLVKNLCDLIIAVHWLGWLKVSDGVVGLLGLISSLIGLYQLW  223 (223)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCChhhHHHHHHHHHHHHHHHhC
Confidence            1 1  23467789999999999999999999999999999999999999999999999999



>KOG4186|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00