Psyllid ID: psy10561


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70---
MDFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSGGLGFDSWRG
cccccccccccEEEcccccccccccccccccccccccccccccEEEEccccccEEEEEEEEcccccccccccc
ccccccccccEEEEccccccccccccccccccccHHHHccccccEEEcccccccEEEEEEccccccccccccc
mdfsapdynvepavgsgerclpgdeahcgdgapardaklaypkgknynrslcsrVGITVglhsgglgfdswrg
mdfsapdyNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITvglhsgglgfdswrg
MDFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSGGLGFDSWRG
***************************************AYPKGKNYNRSLCSRVGITVGLHSGGLGF*****
***SAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSGGLGFDSWR*
MDFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSGGLGFDSWRG
*****PDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSG*LGFDSWR*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSGGLGFDSWRG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query73 2.2.26 [Sep-21-2011]
O61307 2731 Teneurin-m OS=Drosophila yes N/A 0.589 0.015 0.790 2e-13
Q9VYN8 3004 Teneurin-a OS=Drosophila no N/A 0.534 0.012 0.615 3e-08
Q9WTS4 2731 Teneurin-1 OS=Mus musculu yes N/A 0.561 0.015 0.463 1e-05
Q9WTS6 2715 Teneurin-3 OS=Mus musculu no N/A 0.493 0.013 0.583 2e-05
Q9P273 2699 Teneurin-3 OS=Homo sapien yes N/A 0.493 0.013 0.583 2e-05
Q9UKZ4 2725 Teneurin-1 OS=Homo sapien no N/A 0.561 0.015 0.463 2e-05
Q9DER5 2802 Teneurin-2 OS=Gallus gall yes N/A 0.493 0.012 0.583 2e-05
Q9W6V6 2705 Teneurin-1 OS=Gallus gall no N/A 0.493 0.013 0.5 3e-05
Q9W7R4 2590 Teneurin-3 OS=Danio rerio no N/A 0.493 0.013 0.583 3e-05
Q9WTS5 2764 Teneurin-2 OS=Mus musculu no N/A 0.493 0.013 0.583 7e-05
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2 Back     alignment and function desciption
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%)

Query: 2    DFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
            D+S P+ N E  VGSGERCLPGDEAHCGDGA A+DAKLAYPKG
Sbjct: 1248 DYSQPELNWEAVVGSGERCLPGDEAHCGDGALAKDAKLAYPKG 1290




Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.
Drosophila melanogaster (taxid: 7227)
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2 Back     alignment and function description
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1 Back     alignment and function description
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1 Back     alignment and function description
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3 Back     alignment and function description
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2 Back     alignment and function description
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1 Back     alignment and function description
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1 Back     alignment and function description
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1 Back     alignment and function description
>sp|Q9WTS5|TEN2_MOUSE Teneurin-2 OS=Mus musculus GN=Tenm2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query73
328724904 2662 PREDICTED: teneurin-3-like isoform 2 [Ac 0.589 0.016 0.883 3e-15
328724902 2927 PREDICTED: teneurin-3-like isoform 1 [Ac 0.589 0.014 0.883 3e-15
242003399 2599 type II transmembrane protein, putative 0.589 0.016 0.837 1e-14
322790284 1879 hypothetical protein SINV_13496 [Solenop 0.589 0.022 0.813 2e-14
340721624 3454 PREDICTED: teneurin-3-like [Bombus terre 0.589 0.012 0.837 3e-14
350404731 3457 PREDICTED: teneurin-3-like [Bombus impat 0.589 0.012 0.837 3e-14
270006439 2957 tenascin major [Tribolium castaneum] 0.589 0.014 0.837 5e-14
91081003 3108 PREDICTED: similar to odd Oz protein [Tr 0.589 0.013 0.837 6e-14
332023466 3373 Teneurin-3 [Acromyrmex echinatior] 0.589 0.012 0.813 9e-14
307187110 3344 Teneurin-3 [Camponotus floridanus] 0.589 0.012 0.813 9e-14
>gi|328724904|ref|XP_003248283.1| PREDICTED: teneurin-3-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/43 (88%), Positives = 40/43 (93%)

Query: 2    DFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
            +FS PD+N EPAVGSGERCLPGDEAHCGDGA ARDAKLAYPKG
Sbjct: 1188 NFSDPDHNWEPAVGSGERCLPGDEAHCGDGALARDAKLAYPKG 1230




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328724902|ref|XP_001945083.2| PREDICTED: teneurin-3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242003399|ref|XP_002422722.1| type II transmembrane protein, putative [Pediculus humanus corporis] gi|212505544|gb|EEB09984.1| type II transmembrane protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|322790284|gb|EFZ15283.1| hypothetical protein SINV_13496 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|340721624|ref|XP_003399217.1| PREDICTED: teneurin-3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350404731|ref|XP_003487201.1| PREDICTED: teneurin-3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|270006439|gb|EFA02887.1| tenascin major [Tribolium castaneum] Back     alignment and taxonomy information
>gi|91081003|ref|XP_975140.1| PREDICTED: similar to odd Oz protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332023466|gb|EGI63709.1| Teneurin-3 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307187110|gb|EFN72354.1| Teneurin-3 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query73
FB|FBgn0004449 2731 Ten-m "Tenascin major" [Drosop 0.589 0.015 0.790 6.6e-13
FB|FBgn0259240 3378 Ten-a "Tenascin accessory" [Dr 0.534 0.011 0.615 3e-08
ZFIN|ZDB-GENE-081027-3 2467 si:dkey-237h12.3 "si:dkey-237h 0.493 0.014 0.611 9.8e-06
ZFIN|ZDB-GENE-060503-100 2515 si:ch211-12m10.1 "si:ch211-12m 0.493 0.014 0.5 5.7e-05
UNIPROTKB|J9NRQ0 2429 ODZ3 "Uncharacterized protein" 0.493 0.014 0.583 8.7e-05
RGD|1306641 2529 Tenm3 "teneurin transmembrane 0.493 0.014 0.583 9.1e-05
UNIPROTKB|F1LV44 2545 Odz3 "Protein Odz3" [Rattus no 0.493 0.014 0.583 9.2e-05
UNIPROTKB|E1BMG7 2546 ODZ3 "Uncharacterized protein" 0.493 0.014 0.583 9.2e-05
UNIPROTKB|F1P9A6 2699 ODZ3 "Uncharacterized protein" 0.493 0.013 0.583 9.7e-05
UNIPROTKB|Q9P273 2699 TENM3 "Teneurin-3" [Homo sapie 0.493 0.013 0.583 9.7e-05
FB|FBgn0004449 Ten-m "Tenascin major" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 188 (71.2 bits), Expect = 6.6e-13, P = 6.6e-13
 Identities = 34/43 (79%), Positives = 37/43 (86%)

Query:     2 DFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
             D+S P+ N E  VGSGERCLPGDEAHCGDGA A+DAKLAYPKG
Sbjct:  1248 DYSQPELNWEAVVGSGERCLPGDEAHCGDGALAKDAKLAYPKG 1290




GO:0005578 "proteinaceous extracellular matrix" evidence=ISS
GO:0007155 "cell adhesion" evidence=ISS;IMP
GO:0005887 "integral to plasma membrane" evidence=IDA
GO:0008360 "regulation of cell shape" evidence=IMP
GO:0042051 "compound eye photoreceptor development" evidence=IMP
GO:0001745 "compound eye morphogenesis" evidence=IMP
GO:0048058 "compound eye corneal lens development" evidence=IMP
GO:0022416 "chaeta development" evidence=IMP
GO:0045467 "R7 cell development" evidence=IMP
GO:0031005 "filamin binding" evidence=IDA
GO:0008045 "motor neuron axon guidance" evidence=IMP
GO:0031594 "neuromuscular junction" evidence=IDA
GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP
GO:0045211 "postsynaptic membrane" evidence=IDA
GO:0016200 "synaptic target attraction" evidence=IMP
GO:0042802 "identical protein binding" evidence=IDA
FB|FBgn0259240 Ten-a "Tenascin accessory" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081027-3 si:dkey-237h12.3 "si:dkey-237h12.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060503-100 si:ch211-12m10.1 "si:ch211-12m10.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J9NRQ0 ODZ3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1306641 Tenm3 "teneurin transmembrane protein 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LV44 Odz3 "Protein Odz3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMG7 ODZ3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P9A6 ODZ3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9P273 TENM3 "Teneurin-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O61307TENM_DROMENo assigned EC number0.79060.58900.0157yesN/A
Q9DER5TEN2_CHICKNo assigned EC number0.58330.49310.0128yesN/A
Q9P273TEN3_HUMANNo assigned EC number0.58330.49310.0133yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 73
KOG4659|consensus 1899 99.59
>KOG4659|consensus Back     alignment and domain information
Probab=99.59  E-value=4.9e-16  Score=136.81  Aligned_cols=48  Identities=46%  Similarity=0.828  Sum_probs=46.6

Q ss_pred             CCCCCccceEECCcceecCCCCCcCCCCcccchhhhcCCCceeeecCCc
Q psy10561          4 SAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLC   52 (73)
Q Consensus         4 ~d~~~N~EvvaG~Ge~ClP~de~~CGDGG~A~eAtL~~PkGIAvdk~~~   52 (73)
                      +|+.+|+|||+|+||+|+|+||+ ||||++|.+|+|++||||||||++.
T Consensus       440 ~d~~~N~evvaG~Ge~Clp~des-CGDGalA~dA~L~~PkGIa~dk~g~  487 (1899)
T KOG4659|consen  440 QDSRNNYEVVAGDGEVCLPADES-CGDGALAQDAQLIFPKGIAFDKMGN  487 (1899)
T ss_pred             cccccCeeEEeccCcCccccccc-cCcchhcccceeccCCceeEccCCc
Confidence            68999999999999999999999 9999999999999999999999985




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query73
3kya_A496 Putative phosphatase; structural genomics, joint c 90.06
4hw6_A433 Hypothetical protein, IPT/TIG domain protein; puta 86.8
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=90.06  E-value=0.057  Score=42.14  Aligned_cols=42  Identities=21%  Similarity=0.237  Sum_probs=30.2

Q ss_pred             ccceEECCcceecCCCCCcC--CCCcccchhhhcCCCceeeecC
Q psy10561          9 NVEPAVGSGERCLPGDEAHC--GDGAPARDAKLAYPKGKNYNRS   50 (73)
Q Consensus         9 N~EvvaG~Ge~ClP~de~~C--GDGG~A~eAtL~~PkGIAvdk~   50 (73)
                      ...-++|++.++...+...|  .||+++.+|+|.+|.|||||+.
T Consensus       411 ~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~  454 (496)
T 3kya_A          411 IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV  454 (496)
T ss_dssp             BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred             CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence            45567888876411122234  4788999999999999999986



>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00