Psyllid ID: psy10581

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90
Protein Sequence
MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPDKHTYMSLPRPGICGKL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHEEEHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccc
Coil and Loop (DISEMBL)
MAGTETLQVATYHAEYHLKIYAPQLVTAARtladhpsskiaKENLEVFADMWQALVSDITTLCKEImdkeripdkhtymslprpgicgkl
Flexible Loop (DISEMBL)
MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDkeripdkhtymslprpgicgkl
Low Complexity Region (SEG)
MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPDKHTYMSLPRPGICGKL
Disordered region (IsUnstruct)
******LQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERI******************
Disordered Region (DISOPRED)
*****TLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIM****************P******
Disordered Region (DISEMBL)
MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPDKHTYMSLPRPGICGKL
Disordered Region (DISPRO)
****ETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD*H*Y**L*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPDKHTYMSLPRPGICGKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	90	2.2.26 [Sep-21-2011]
Q5RC06	734	Alpha-catulin OS=Pongo ab	yes	N/A	0.933	0.114	0.465	2e-17
Q9UBT7	734	Alpha-catulin OS=Homo sap	yes	N/A	0.933	0.114	0.465	2e-17
O88327	731	Alpha-catulin OS=Mus musc	yes	N/A	0.933	0.114	0.441	1e-14
Q6GLP0	966	Catenin alpha-2 OS=Xenopu	N/A	N/A	0.488	0.045	0.431	0.0002
P30997	906	Catenin alpha-2 OS=Gallus	no	N/A	0.488	0.048	0.431	0.0002
Q5R416	905	Catenin alpha-2 OS=Pongo	no	N/A	0.488	0.048	0.431	0.0002
Q61301	953	Catenin alpha-2 OS=Mus mu	no	N/A	0.488	0.046	0.431	0.0002
A4IGI7	966	Catenin alpha-2 OS=Xenopu	no	N/A	0.488	0.045	0.431	0.0002
P26232	953	Catenin alpha-2 OS=Homo s	no	N/A	0.488	0.046	0.431	0.0002
B7ZC77	865	Catenin alpha-2 OS=Danio	no	N/A	0.488	0.050	0.431	0.0002

>sp|Q5RC06|CTNL1_PONAB Alpha-catulin OS=Pongo abelii GN=CTNNAL1 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 2/86 (2%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD++
Sbjct: 457 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMS 516

Query: 61  TLCKEIMD--KERIPDKHTYMSLPRP 84
           TL +EI D  + R  +K+ Y+SLP+P
Sbjct: 517 TLLREINDVFEGRRGEKYGYLSLPKP 542

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).
Pongo abelii (taxid: 9601)

>sp|Q9UBT7|CTNL1_HUMAN Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 2/86 (2%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD++
Sbjct: 457 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMS 516

Query: 61  TLCKEIMD--KERIPDKHTYMSLPRP 84
           TL +EI D  + R  +K+ Y+SLP+P
Sbjct: 517 TLLREINDVFEGRRGEKYGYLSLPKP 542

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).

Homo sapiens (taxid: 9606)

>sp|O88327|CTNL1_MOUSE Alpha-catulin OS=Mus musculus GN=Ctnnal1 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/86 (44%), Positives = 60/86 (69%), Gaps = 2/86 (2%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD+ 
Sbjct: 456 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQMSDMA 515

Query: 61  TLCKEIMD--KERIPDKHTYMSLPRP 84
           TL +EI D  + R  ++  ++SLP+P
Sbjct: 516 TLLREISDVFEGRRGERCDHLSLPKP 541

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).

Mus musculus (taxid: 10090)

>sp|Q6GLP0|CTNA2_XENLA Catenin alpha-2 OS=Xenopus laevis GN=ctnna2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 472 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 515

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Xenopus laevis (taxid: 8355)

>sp|P30997|CTNA2_CHICK Catenin alpha-2 OS=Gallus gallus GN=CTNNA2 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 461 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 504

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Gallus gallus (taxid: 9031)

>sp|Q5R416|CTNA2_PONAB Catenin alpha-2 OS=Pongo abelii GN=CTNNA2 PE=2 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 460 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 503

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system. Regulates morphological plasticity of synapses and cerebellar and hippocampal lamination during development. Functions in the control of startle modulation.

Pongo abelii (taxid: 9601)

>sp|Q61301|CTNA2_MOUSE Catenin alpha-2 OS=Mus musculus GN=Ctnna2 PE=1 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 460 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 503

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system. Regulates morphological plasticity of synapses and cerebellar and hippocampal lamination during development. Functions in the control of startle modulation.

Mus musculus (taxid: 10090)

>sp|A4IGI7|CTNA2_XENTR Catenin alpha-2 OS=Xenopus tropicalis GN=ctnna2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 472 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 515

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Xenopus tropicalis (taxid: 8364)

>sp|P26232|CTNA2_HUMAN Catenin alpha-2 OS=Homo sapiens GN=CTNNA2 PE=1 SV=5

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 460 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 503

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system. Regulates morphological plasticity of synapses and cerebellar and hippocampal lamination during development. Functions in the control of startle modulation.

Homo sapiens (taxid: 9606)

>sp|B7ZC77|CTNA2_DANRE Catenin alpha-2 OS=Danio rerio GN=Ctnna2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 23  PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
           PQ++ AA TLA  P SK+A++N++VF D W+  V  +T    +I
Sbjct: 420 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRILTEAVDDI 463

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	90
328723686	417	PREDICTED: alpha-catulin-like, partial [	0.966	0.208	0.659	4e-27
340709559	760	PREDICTED: alpha-catulin-like isoform 1	0.977	0.115	0.584	8e-23
350401121	760	PREDICTED: alpha-catulin-like isoform 1	0.977	0.115	0.584	8e-23
380028231	691	PREDICTED: alpha-catulin-like [Apis flor	0.977	0.127	0.584	8e-23
328781966	849	PREDICTED: alpha-catulin-like [Apis mell	0.977	0.103	0.584	1e-22
332030215	823	Alpha-catulin [Acromyrmex echinatior]	0.977	0.106	0.584	1e-22
307167509	756	Alpha-catulin [Camponotus floridanus]	0.977	0.116	0.584	1e-22
340709563	845	PREDICTED: alpha-catulin-like isoform 3	0.977	0.104	0.584	1e-22
340709561	838	PREDICTED: alpha-catulin-like isoform 2	0.977	0.105	0.584	1e-22
307213678	739	Alpha-catulin [Harpegnathos saltator]	0.977	0.119	0.584	1e-22

>gi|328723686|ref|XP_001943925.2| PREDICTED: alpha-catulin-like, partial [Acyrthosiphon pisum]

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A  E+LQV+  HAE +L++YAPQ+VTAA+ LA +P SKI KENLEVFADMWQAL  D++
Sbjct: 91  IATAESLQVSAKHAEVNLRVYAPQIVTAAQALAHYPCSKIIKENLEVFADMWQALTQDVS 150

Query: 61  TLCKEIMDKERIPDKHTYMSLPRPGICG 88
           T+CKEIM+K+ IP+K TYMSLPRPG  G
Sbjct: 151 TVCKEIMEKQ-IPEKQTYMSLPRPGKHG 177

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709559|ref|XP_003393373.1| PREDICTED: alpha-catulin-like isoform 1 [Bombus terrestris]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 446 VALSESLQVSAKFTEINLRIYGPQVVTAAYTLARHPTSKIAKENLEVFADMWQWLMTDVT 505

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 506 TVAKDVLELNQNRPEKQVYMSLPRPGKHG 534

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401121|ref|XP_003486053.1| PREDICTED: alpha-catulin-like isoform 1 [Bombus impatiens]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 446 VALSESLQVSAKFTEINLRIYGPQVVTAAYTLARHPTSKIAKENLEVFADMWQWLMTDVT 505

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 506 TVAKDVLELNQNRPEKQVYMSLPRPGKHG 534

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028231|ref|XP_003697811.1| PREDICTED: alpha-catulin-like [Apis florea]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 446 VALSESLQVSAKFTEINLRIYGPQVVTAAYTLARHPTSKIAKENLEVFADMWQWLMTDVT 505

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 506 TVAKDVLELNQNRPEKQVYMSLPRPGKHG 534

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781966|ref|XP_624400.3| PREDICTED: alpha-catulin-like [Apis mellifera]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 446 VALSESLQVSAKFTEINLRIYGPQVVTAAYTLARHPTSKIAKENLEVFADMWQWLMTDVT 505

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 506 TVAKDVLELNQNRPEKQVYMSLPRPGKHG 534

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030215|gb|EGI69998.1| Alpha-catulin [Acromyrmex echinatior]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 429 VALSESLQVSAKFTEINLRIYGPQVVTAAHTLARHPTSKIAKENLEVFADMWQWLMTDVT 488

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 489 TVAKDVLELSQNRPEKQVYMSLPRPGKHG 517

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167509|gb|EFN61082.1| Alpha-catulin [Camponotus floridanus]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 365 VALSESLQVSAKFTEINLRIYGPQVVTAAHTLARHPTSKIAKENLEVFADMWQWLMTDVT 424

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 425 TVAKDVLELSQNRPEKQVYMSLPRPGKHG 453

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709563|ref|XP_003393375.1| PREDICTED: alpha-catulin-like isoform 3 [Bombus terrestris]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 446 VALSESLQVSAKFTEINLRIYGPQVVTAAYTLARHPTSKIAKENLEVFADMWQWLMTDVT 505

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 506 TVAKDVLELNQNRPEKQVYMSLPRPGKHG 534

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709561|ref|XP_003393374.1| PREDICTED: alpha-catulin-like isoform 2 [Bombus terrestris]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 439 VALSESLQVSAKFTEINLRIYGPQVVTAAYTLARHPTSKIAKENLEVFADMWQWLMTDVT 498

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 499 TVAKDVLELNQNRPEKQVYMSLPRPGKHG 527

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213678|gb|EFN89034.1| Alpha-catulin [Harpegnathos saltator]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           +A +E+LQV+    E +L+IY PQ+VTAA TLA HP+SKIAKENLEVFADMWQ L++D+T
Sbjct: 343 VALSESLQVSAKFTEINLRIYGPQVVTAAHTLARHPTSKIAKENLEVFADMWQWLMTDVT 402

Query: 61  TLCKEIMD-KERIPDKHTYMSLPRPGICG 88
           T+ K++++  +  P+K  YMSLPRPG  G
Sbjct: 403 TVAKDVLELTQNRPEKQVYMSLPRPGKHG 431

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	90
ZFIN|ZDB-GENE-060503-507	754	ctnnal1 "catenin (cadherin-ass	0.944	0.112	0.505	8.7e-18
UNIPROTKB|F1NMC0	722	CTNNAL1 "Uncharacterized prote	0.944	0.117	0.505	1.7e-17
UNIPROTKB|F1SP25	720	CTNNAL1 "Uncharacterized prote	0.933	0.116	0.465	5.4e-16
UNIPROTKB|E1BBP2	731	CTNNAL1 "Uncharacterized prote	0.933	0.114	0.465	7e-16
UNIPROTKB|Q9UBT7	734	CTNNAL1 "Alpha-catulin" [Homo	0.933	0.114	0.465	7.1e-16
RGD|1311434	731	Ctnnal1 "catenin (cadherin ass	0.933	0.114	0.453	1.5e-15
UNIPROTKB|F1Q370	684	CTNNAL1 "Uncharacterized prote	0.933	0.122	0.453	1.7e-15
UNIPROTKB|F1PPY7	698	CTNNAL1 "Uncharacterized prote	0.933	0.120	0.453	1.8e-15
MGI|MGI:1859649	731	Ctnnal1 "catenin (cadherin ass	0.933	0.114	0.441	2.2e-14
WB|WBGene00000832	820	ctn-1 [Caenorhabditis elegans	0.911	0.1	0.470	5.6e-14

ZFIN|ZDB-GENE-060503-507 ctnnal1 "catenin (cadherin-associated protein), alpha-like 1" [Danio rerio (taxid:7955)]

 Score = 227 (85.0 bits), Expect = 8.7e-18, P = 8.7e-18
 Identities = 44/87 (50%), Positives = 63/87 (72%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++  PQ+++AA+TLA HP+SKIAKENL+VF + W++ + D+ 
Sbjct:   442 VSGTEPLEITCIHAEETFRVIGPQIISAAQTLALHPTSKIAKENLDVFCEAWESQLCDMA 501

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRPG 85
              L KEI D  + R  DK TY+SLPRPG
Sbjct:   502 ILLKEINDVFEGRRGDKKTYLSLPRPG 528

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

UNIPROTKB|F1NMC0 CTNNAL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 224 (83.9 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 44/87 (50%), Positives = 63/87 (72%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++  PQ+++AA TLA HPSSKIAKENLEVF + W++ +SD++
Sbjct:   411 VSGTEPLEITCIHAEDTFQVTGPQIISAAETLALHPSSKIAKENLEVFCEAWESQLSDMS 470

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRPG 85
              L +EI D  + R  +K  Y+SLPRPG
Sbjct:   471 MLLREINDVFEGRRGEKRVYLSLPRPG 497

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

UNIPROTKB|F1SP25 CTNNAL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 210 (79.0 bits), Expect = 5.4e-16, P = 5.4e-16
 Identities = 40/86 (46%), Positives = 62/86 (72%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD++
Sbjct:   457 VSGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDLS 516

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  +K+ Y+SLP+P
Sbjct:   517 TLLREINDVFEGRRGEKYGYLSLPKP 542

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|E1BBP2 CTNNAL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 209 (78.6 bits), Expect = 7.0e-16, P = 7.0e-16
 Identities = 40/86 (46%), Positives = 62/86 (72%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD++
Sbjct:   457 VSGTEPLEITCLHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMS 516

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  +K+ Y+SLP+P
Sbjct:   517 TLLREINDVFEGRRGEKYGYLSLPKP 542

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|Q9UBT7 CTNNAL1 "Alpha-catulin" [Homo sapiens (taxid:9606)]

 Score = 209 (78.6 bits), Expect = 7.1e-16, P = 7.1e-16
 Identities = 40/86 (46%), Positives = 62/86 (72%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD++
Sbjct:   457 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMS 516

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  +K+ Y+SLP+P
Sbjct:   517 TLLREINDVFEGRRGEKYGYLSLPKP 542

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0007266 "Rho protein signal transduction" evidence=IDA

RGD|1311434 Ctnnal1 "catenin (cadherin associated protein), alpha-like 1" [Rattus norvegicus (taxid:10116)]

 Score = 206 (77.6 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 39/86 (45%), Positives = 61/86 (70%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD+ 
Sbjct:   456 VSGTEPLEITCMHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDLA 515

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  +K+ ++SLP+P
Sbjct:   516 TLLREISDVFEGRRGEKYDHLSLPKP 541

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0007155 "cell adhesion" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA;ISO

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

UNIPROTKB|F1Q370 CTNNAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 205 (77.2 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 39/86 (45%), Positives = 61/86 (70%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ + D++
Sbjct:   410 ISGTEPLEITCMHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQIGDMS 469

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  +K+ Y+SLP+P
Sbjct:   470 TLLREINDVFEGRRGEKYGYLSLPKP 495

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|F1PPY7 CTNNAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 205 (77.2 bits), Expect = 1.8e-15, P = 1.8e-15
 Identities = 39/86 (45%), Positives = 61/86 (70%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ + D++
Sbjct:   421 ISGTEPLEITCMHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQIGDMS 480

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  +K+ Y+SLP+P
Sbjct:   481 TLLREINDVFEGRRGEKYGYLSLPKP 506

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

MGI|MGI:1859649 Ctnnal1 "catenin (cadherin associated protein), alpha-like 1" [Mus musculus (taxid:10090)]

 Score = 195 (73.7 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 38/86 (44%), Positives = 60/86 (69%)

Query:     1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
             ++GTE L++   HAE   ++   Q+++AA TL  HPSSKIAKENL+VF + W++ +SD+ 
Sbjct:   456 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQMSDMA 515

Query:    61 TLCKEIMD--KERIPDKHTYMSLPRP 84
             TL +EI D  + R  ++  ++SLP+P
Sbjct:   516 TLLREISDVFEGRRGERCDHLSLPKP 541

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=ISO

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

WB|WBGene00000832 ctn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 192 (72.6 bits), Expect = 5.6e-14, P = 5.6e-14
 Identities = 40/85 (47%), Positives = 54/85 (63%)

Query:     4 TETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLC 63
             T+ L V T H E +++  AP  + A RTL  HPSS+IA+ENLEVF D W   V+D++ + 
Sbjct:   471 TDALHVHTGHVERNMRALAPLTILAGRTLCVHPSSRIARENLEVFCDTWGQAVNDLSRVA 530

Query:    64 KE--IMDKERIP-DKHTYMSLPRPG 85
             KE  +    R+  +K  YMSLPRPG
Sbjct:   531 KESDVAANGRVAAEKQAYMSLPRPG 555

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0040012 "regulation of locomotion" evidence=IMP

GO:0055120 "striated muscle dense body" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	90
pfam01044	850	pfam01044, Vinculin, Vinculin family	6e-08

>gnl|CDD|216263 pfam01044, Vinculin, Vinculin family

 Score = 47.8 bits (114), Expect = 6e-08
 Identities = 19/47 (40%), Positives = 28/47 (59%)

Query: 22  APQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD 68
            PQ++ AAR L  +P SK A+EN+E F + W+  V  +T    +I D
Sbjct: 442 TPQVINAARILLHNPGSKAAQENMETFKNQWEDQVRRLTEAVDDITD 488

Length = 850

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	90
KOG3681|consensus	835		99.77
PF01044	968	Vinculin: Vinculin family; InterPro: IPR006077 Vin	99.62
KOG3681|consensus	835		94.4

>KOG3681|consensus

Probab=99.77  E-value=1.3e-19  Score=156.06  Aligned_cols=85  Identities=29%  Similarity=0.497  Sum_probs=73.9

Q ss_pred             cchhHHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCcee
Q psy10581          2 AGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKE---RIPDKHTY   78 (90)
Q Consensus         2 s~tE~L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d~g---~~~~k~~y   78 (90)
                      |..|..-.-.++++.|+++||||||+||++|+.+|.||+|+||||+||++|+++|+.||++||+||+..   ...|.|.+
T Consensus       424 s~n~~~v~~v~~sa~ql~~L~Pqvi~Aa~~l~~~P~sk~A~enme~~k~~w~~~V~~lt~avd~~t~~~dfl~vSE~hi~  503 (835)
T KOG3681|consen  424 SNNEEGVKIVQHSAAQLESLCPQVINAARILAARPGSKAAQENMETYKNQWEDQVRVLTTAVDDITDIDDFLAVSEEHIL  503 (835)
T ss_pred             ccccchhHHHHHHHHHHHhcchHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHHHHHHH
Confidence            444555556677888899999999999999999999999999999999999999999999999999822   27888888


Q ss_pred             eeCCCCCC
Q psy10581         79 MSLPRPGI   86 (90)
Q Consensus        79 ~slprp~k   86 (90)
                      ..++++++
T Consensus       504 ed~~kc~~  511 (835)
T KOG3681|consen  504 EDVNKCGV  511 (835)
T ss_pred             Hhhhhhhh
Confidence            88888764

>PF01044 Vinculin: Vinculin family; InterPro: IPR006077 Vinculin is a eukaryotic protein that seems to be involved in the attachment of the actin-based microfilaments to the plasma membrane

Probab=99.62  E-value=6.4e-16  Score=134.70  Aligned_cols=67  Identities=45%  Similarity=0.624  Sum_probs=60.2

Q ss_pred             chhHHHHHH-HHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10581          3 GTETLQVAT-YHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDK   69 (90)
Q Consensus         3 ~tE~L~vta-~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d~   69 (90)
                      .++...+.. ++++.+|+.|+||||+||++|+.||+||+|+||||+||++|++.+++|+.+||+|+|.
T Consensus       543 ~~d~~~v~~I~~aa~~l~~L~pqvi~Aa~~l~~~P~sk~A~e~le~~~~~W~~~v~~L~~~vd~i~d~  610 (968)
T PF01044_consen  543 CTDEETVKEIRHAAEQLEKLTPQVINAARILAANPSSKAAKEHLEVFREAWEDAVEDLTEAVDEITDV  610 (968)
T ss_dssp             S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHCTS-H
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence            356666775 6889999999999999999999999999999999999999999999999999999883

Vinculin is located at the cytoplasmic side of focal contacts or adhesion plaques []. In addition to actin, vinculin interacts with other structural proteins such as talin and alpha-actinins. Vinculin is a large protein of 116 kDa (about a 1000 residues). Structurally the protein consists of an acidic N-terminal domain of about 90 kDa separated from a basic C-terminal domain of about 25 kDa by a proline-rich region of about 50 residues. The central part of the N-terminal domain consists of a variable number (3 in vertebrates, 2 in Caenorhabditis elegans) of repeats of a 110 amino acids domain. Alpha-catenins are evolutionary related to vinculin IPR001033 from INTERPRO []. Catenins are proteins that associate with the cytoplasmic domain of a variety of cadherins. The association of catenins to cadherins produces a complex which is linked to the actin filament network, and which seems to be of primary importance for cadherins cell-adhesion properties. Three different types of catenins seem to exist: alpha, beta, and gamma. Alpha-catenins are proteins of about 100 kDa which are evolutionary related to vinculin. In terms of their structure the most significant differences are the absence, in alpha-catenin, of the repeated domain and of the proline-rich segment.; GO: 0005198 structural molecule activity, 0007155 cell adhesion, 0015629 actin cytoskeleton; PDB: 3S90_B 1TR2_B 2IBF_A 1RKC_A 3TJ5_A 3RF3_B 4DJ9_A 2GWW_A 2HSQ_A 3TJ6_A ....

>KOG3681|consensus

Probab=94.40  E-value=0.068  Score=47.75  Aligned_cols=86  Identities=16%  Similarity=0.181  Sum_probs=72.1

Q ss_pred             cchhHHHHHHHHHHHHHhhhhHHHHH------------------------HHHHHhhCCC--CHHHHHHHHHHHHHHHHH
Q psy10581          2 AGTETLQVATYHAEYHLKIYAPQLVT------------------------AARTLADHPS--SKIAKENLEVFADMWQAL   55 (90)
Q Consensus         2 s~tE~L~vta~~ae~~l~~l~PQVi~------------------------Aar~L~~~P~--Sk~A~En~d~f~~~W~~~   55 (90)
                      +..+.|.++..|+...++.-.-++.+                        ++......|.  .+.++++.+.|++.|..+
T Consensus       490 ~~~dfl~vSE~hi~ed~~kc~~ai~~~~~~~l~~~a~~i~~ra~rv~~v~~aE~dn~e~~~yte~v~~a~~~l~~~v~~~  569 (835)
T KOG3681|consen  490 DIDDFLAVSEEHILEDVNKCGVAIQSIDPQMLDRTAGAIRGRANRVLHVVKAEMDNYEPPVYTERVKEAVDVLSETVMPQ  569 (835)
T ss_pred             CchhHHHHHHHHHHHhhhhhhhhhccccchhhhhhhhhhhhhhhHHHHHHHHHHhccCCchhhHHHHHHHHHHHhccchh
Confidence            45678999999999888776666555                        5556666677  899999999999999999


Q ss_pred             HHHHHHHHHHHHh--cccCCCCceeeeCCCCCCC
Q psy10581         56 VSDITTLCKEIMD--KERIPDKHTYMSLPRPGIC   87 (90)
Q Consensus        56 v~~Lt~lvdei~d--~g~~~~k~~y~slprp~kh   87 (90)
                      |.+...+.-++.|  .++..++..|+..+|+-.-
T Consensus       570 ~~d~~~~a~e~~d~~~~~~~~~n~~i~a~~~V~d  603 (835)
T KOG3681|consen  570 FGDAVSVAVEILDPDKAFRGEENRFLDASRLVYD  603 (835)
T ss_pred             HHHHHHHHHHhcCchhcccchhhHHhhhhHHHHh
Confidence            9999999999999  6678899999999887543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	90
4igg_A	832	Full-Length Human Alpha-Catenin Crystal Structure L		2e-04
1h6g_A	256	Alpha-Catenin M-Domain Length = 256		5e-04
1l7c_A	269	Alpha-Catenin Fragment, Residues 385-651 Length = 2		5e-04

>pdb|4IGG|A Chain A, Full-Length Human Alpha-Catenin Crystal Structure Length = 832

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17  HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
            L+   PQ++ AA  LA  P SK+A+EN+++F + W+  V  +T    +I
Sbjct: 375 QLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI 424

>pdb|1H6G|A Chain A, Alpha-Catenin M-Domain Length = 256

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 17  HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
            L+   PQ++ AA  LA  P SK+A+EN ++F + W+  V  +T    +I
Sbjct: 80  QLEALCPQVINAALALAAKPQSKLAQENXDLFKEQWEKQVRVLTDAVDDI 129

>pdb|1L7C|A Chain A, Alpha-Catenin Fragment, Residues 385-651 Length = 269

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 17  HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
            L+   PQ++ AA  LA  P SK+A+EN ++F + W+  V  +T    +I
Sbjct: 74  QLEALCPQVINAALALAAKPQSKLAQENXDLFKEQWEKQVRVLTDAVDDI 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	90
1h6g_A	256	Alpha-1 catenin; adhesion modulation, cytoskeleton	1e-14
1tr2_A	1066	Vinculin isoform 1; actin-binding, cell adhesion;	5e-07

>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A Length = 256

 Score = 65.6 bits (159), Expect = 1e-14
 Identities = 19/68 (27%), Positives = 34/68 (50%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           ++  E        +   L+   PQ++ AA  LA  P SK+A+EN+++F + W+  V  +T
Sbjct: 64  ISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLT 123

Query: 61  TLCKEIMD 68
               +I  
Sbjct: 124 DAVDDITS 131

>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A Length = 1066

 Score = 44.9 bits (104), Expect = 5e-07
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 5   ETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCK 64
           ++       +    +   PQ+V+AAR L  +P ++ A E+ E   + W   V  +T L  
Sbjct: 655 KSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714

Query: 65  EIMDKERI 72
           E +D + +
Sbjct: 715 EAIDTKSL 722

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	90
1h6g_A	256	Alpha-1 catenin; adhesion modulation, cytoskeleton	99.83
4igg_A	832	Catenin alpha-1; asymmetric dimer, adherens juncti	99.8
1tr2_A	1066	Vinculin isoform 1; actin-binding, cell adhesion;	99.18
1dow_A	205	Alpha-catenin; four-helix bundle, cell adhesion; 1	93.69
2l7a_A	131	Talin-1; vinculin, bundle, focal adhesion, integri	90.61
3rf3_A	258	Vinculin, metavinculin; alpha-helix bundle domain,	89.37
2x0c_A	309	Talin-1; cytoskeleton, cell membrane, actin, synem	89.13
1h6g_A	256	Alpha-1 catenin; adhesion modulation, cytoskeleton	86.69

>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A

Probab=99.83  E-value=1.8e-20  Score=140.87  Aligned_cols=69  Identities=28%  Similarity=0.451  Sum_probs=66.8

Q ss_pred             CcchhHHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10581          1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDK   69 (90)
Q Consensus         1 is~tE~L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d~   69 (90)
                      +|+.|.++..+++|+++++.|+||||+|||+|+.||+||+|+||||+||++|++.|+.|+.+||+|+|.
T Consensus        64 ~s~~~~~~~~v~~aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~~w~~~v~~L~~~vd~~~~~  132 (256)
T 1h6g_A           64 ISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSI  132 (256)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            578999999999999999999999999999999999999999999999999999999999999999974

>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}

Probab=99.80  E-value=9.9e-20  Score=155.81  Aligned_cols=69  Identities=28%  Similarity=0.451  Sum_probs=62.8

Q ss_pred             CcchhHHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10581          1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDK   69 (90)
Q Consensus         1 is~tE~L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d~   69 (90)
                      +|+.|.+....++++++++.||||||+|||+|+.||+||+|+||||+||++|+++|+.|+++||+|+|.
T Consensus       359 ~s~ne~~v~~i~~aa~~le~L~PQVI~Aar~L~~~P~Sk~A~Enle~f~~~W~~~v~~L~~avDdi~di  427 (832)
T 4igg_A          359 ISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSI  427 (832)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCH
T ss_pred             hcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence            466777666777777779999999999999999999999999999999999999999999999999873

>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A

Probab=99.18  E-value=2.7e-11  Score=104.99  Aligned_cols=62  Identities=27%  Similarity=0.392  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581          7 LQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus         7 L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      ..-..+.+..+|+.+|||||+|||+++.+|+|++|++||+.|+++|.+.+.+|+++||+|.|
T Consensus       657 ~~~~i~~aa~~l~~~t~~lv~aar~~~~~p~n~~Ak~~l~~~~~~~~~~v~~L~~~V~~i~d  718 (1066)
T 1tr2_A          657 TVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAID  718 (1066)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCTHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            33445577778999999999999999999999999999999999999999999999999887

>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A

Probab=93.69  E-value=0.32  Score=35.64  Aligned_cols=49  Identities=22%  Similarity=0.258  Sum_probs=39.5

Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581         13 HAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus        13 ~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      -|-..|+..+|-+++|-++...||++.-|++|-|-...       .|+.++++|++
T Consensus       153 aAr~~Lk~~sp~L~ta~k~~lrhp~~~~a~~nRd~v~~-------qm~~al~~I~~  201 (205)
T 1dow_A          153 AARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYK-------QLQQAVTGISN  201 (205)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-------HHHHHHHHHHH
T ss_pred             HHHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence            35567999999999999999999999999999995553       45555555554

>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}

Probab=90.61  E-value=1.4  Score=30.38  Aligned_cols=49  Identities=18%  Similarity=0.192  Sum_probs=38.9

Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581         13 HAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus        13 ~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      .|.+.|..-.+.+|+|||-.+.||+|+.++.       .|.+...+|..++.++..
T Consensus        78 ~AAk~La~At~~MVeaAK~~A~NP~d~~~q~-------~Lr~Aae~L~~at~~~~~  126 (131)
T 2l7a_A           78 SAAKILADATAKMVEAAKGAAAHPDSEEQQQ-------RLREAAEGLRMATNAAAQ  126 (131)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSSCHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence            4555689999999999999999999966554       466677778888877764

>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...

Probab=89.37  E-value=1.1  Score=33.48  Aligned_cols=49  Identities=16%  Similarity=0.212  Sum_probs=41.1

Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581         13 HAEYHLKIYAPQLVTAARTLADH-----PSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus        13 ~ae~~l~~l~PQVi~Aar~L~~~-----P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      -|-..|+..+|-+++|.++...|     |+...|++|=|-..       ..|+.++++|+.
T Consensus       193 ~Ar~~Lk~~~p~L~ta~k~~lrh~~~~~~~~~~a~~nRd~v~-------~~m~~al~~I~~  246 (258)
T 3rf3_A          193 NSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTV-------EKMSAEINEIIR  246 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHhHHHHH-------HHHHHHHHHHHH
Confidence            35568999999999999999999     89999999977665       567777777777

>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B

Probab=89.13  E-value=2.6  Score=32.38  Aligned_cols=53  Identities=17%  Similarity=0.115  Sum_probs=43.7

Q ss_pred             HHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10581         14 AEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI   66 (90)
Q Consensus        14 ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei   66 (90)
                      +...+-.-+=++|.+||-|+.+|.+.-.+++|-..-..=.+.|++|.+.+.+.
T Consensus       252 a~r~v~~~s~~ll~taK~la~~P~dp~~~~~La~~ar~VSdsI~~Li~ai~~~  304 (309)
T 2x0c_A          252 SAKTMLESAGGLIQTARALAVNPRDPPRWSVLAGHSRTVSDSIKKLITSMRDK  304 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34447777889999999999999999999888888888888888877776654

>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A

Probab=86.69  E-value=2  Score=31.70  Aligned_cols=51  Identities=12%  Similarity=0.155  Sum_probs=35.6

Q ss_pred             HHHHHHhh-hhHHHHHHHHHH----hhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10581         13 HAEYHLKI-YAPQLVTAARTL----ADHPSSKIAKENLEVFADMWQALVSDITTLC   63 (90)
Q Consensus        13 ~ae~~l~~-l~PQVi~Aar~L----~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lv   63 (90)
                      .|...|+. +.|+++.+|+..    +.+|++...+.+|-.=.+.--+.++.++.+|
T Consensus       198 ~a~~~L~~a~~p~mv~~ak~~~~~~a~np~d~~~~~~~~~a~~~L~~~v~~vr~av  253 (256)
T 1h6g_A          198 EATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAV  253 (256)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHTSSSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhchHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445888 599999999996    9999997777666555544445555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	90
d1h6ga1	131	a.24.9.1 (A:377-507) alpha-catenin {Human (Homo sa	1e-20
d1st6a6	72	a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gal	1e-19

>d1h6ga1 a.24.9.1 (A:377-507) alpha-catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 131

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: alpha-catenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (190), Expect = 1e-20
 Identities = 19/66 (28%), Positives = 34/66 (51%)

Query: 1   MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
           ++  E        +   L+   PQ++ AA  LA  P SK+A+EN+++F + W+  V  +T
Sbjct: 64  ISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLT 123

Query: 61  TLCKEI 66
               +I
Sbjct: 124 DAVDDI 129

>d1st6a6 a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 72

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 73.3 bits (180), Expect = 1e-19
 Identities = 17/56 (30%), Positives = 27/56 (48%)

Query: 13 HAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD 68
                +   PQ+V+AAR L  +P ++ A E+ E   + W   V  +T L  E +D
Sbjct: 17 ATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAID 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	90
d1st6a6	72	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	99.96
d1h6ga1	131	alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1dova_	181	alpha-catenin {Mouse (Mus musculus) [TaxId: 10090]	93.61
d1u89a1	138	Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}	93.06
d1sj8a2	125	Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}	92.22
d1st6a7	137	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	92.14
d1t01a2	127	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	85.99
d2b0ha1	136	Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}	80.88

>d1st6a6 a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=4.8e-30  Score=163.94  Aligned_cols=62  Identities=31%  Similarity=0.477  Sum_probs=58.5

Q ss_pred             chhHHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581          3 GTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus         3 ~tE~L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      ++|.|+++|++    ||.||||||+|||+|+.||+||+|+||||+||++|+++|++|+++||||+|
T Consensus        11 ~ve~i~~aa~q----le~L~PQVi~AariL~~~P~sK~a~En~e~~~~~W~~~v~~l~~~vDei~D   72 (72)
T d1st6a6          11 TVEGIQATVKS----ARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAID   72 (72)
T ss_dssp             HHHHHHHHHHH----HHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHH----HHHHCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            46778877776    999999999999999999999999999999999999999999999999987

>d1h6ga1 a.24.9.1 (A:377-507) alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: alpha-catenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.1e-28  Score=168.15  Aligned_cols=68  Identities=28%  Similarity=0.468  Sum_probs=66.3

Q ss_pred             CcchhHHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581          1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus         1 is~tE~L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      +|+.|++...+++|+++|++||||||||||+|+.||+||+|+||||+||++|+++|++|+++|||||.
T Consensus        64 ~s~ne~~v~~i~~aa~~l~~L~PQVi~Aar~l~~~P~sk~a~en~e~~~~~W~~~v~~L~~~vd~it~  131 (131)
T d1h6ga1          64 ISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITS  131 (131)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hcCChHHHHHHHHHHHHHHHHChHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            68899999999999999999999999999999999999999999999999999999999999999984

>d1dova_ a.24.9.1 (A:) alpha-catenin {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: alpha-catenin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.61  E-value=0.17  Score=34.58  Aligned_cols=49  Identities=22%  Similarity=0.255  Sum_probs=41.5

Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10581         13 HAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD   68 (90)
Q Consensus        13 ~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~d   68 (90)
                      -|-..|+...|.+++|.++...||++.-|++|=|-..       ..|+.++++|++
T Consensus       128 ~ar~~Lk~~~p~L~ts~k~~lrhp~~~~a~~nRd~v~-------~~m~~al~~I~~  176 (181)
T d1dova_         128 AARGILQKNVPILYTASQACLQHPDVAAYKANRDLIY-------KQLQQAVTGISN  176 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcHHHHHhHHHHH-------HHHHHHHHHHHH
Confidence            3556799999999999999999999999999999776       556666666665

>d1u89a1 a.216.1.1 (A:752-889) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: I/LWEQ domain
superfamily: I/LWEQ domain
family: I/LWEQ domain
domain: Talin 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.06  E-value=0.023  Score=37.14  Aligned_cols=36  Identities=25%  Similarity=0.239  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHH
Q psy10581          8 QVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKE   43 (90)
Q Consensus         8 ~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~E   43 (90)
                      +-.-..|...|-..+||+|+++|..+.+|+|+.++|
T Consensus       102 q~~li~aA~~va~~t~qLV~aak~~a~~p~~~~~qq  137 (138)
T d1u89a1         102 SRKLLSAAKILADATAKMVEAAKGAAAHPDSEEQQQ  137 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSSSCCSSCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhhcc
Confidence            334455666688888888888888888888876543

>d1sj8a2 a.216.1.1 (A:658-782) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: I/LWEQ domain
superfamily: I/LWEQ domain
family: I/LWEQ domain
domain: Talin 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.22  E-value=0.6  Score=29.15  Aligned_cols=56  Identities=18%  Similarity=0.169  Sum_probs=46.9

Q ss_pred             HHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10581         12 YHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIM   67 (90)
Q Consensus        12 ~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lvdei~   67 (90)
                      ..+..++-.-+.|++.++|..+.+|+++.+++-|....+.=...++.|-.++..+.
T Consensus        46 i~aa~~v~~~t~qLv~~aK~~a~~~~d~~~q~~L~~aak~V~~a~~~Lv~a~~~a~  101 (125)
T d1sj8a2          46 IAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVAKAVEGCVSASQAAT  101 (125)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            34455688889999999999999999999999999998888888888877776554

>d1st6a7 a.24.9.1 (A:719-855) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=92.14  E-value=0.037  Score=36.48  Aligned_cols=54  Identities=15%  Similarity=0.029  Sum_probs=41.6

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10581         10 ATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLC   63 (90)
Q Consensus        10 ta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~W~~~v~~Lt~lv   63 (90)
                      ....|..+|+.-.+|.+.+|+.++.+|+|+..++.|-.-.+.--+.|+.++.++
T Consensus        64 ~V~~Avk~La~~~~~~v~~ak~va~np~d~~~q~~~~daa~~l~~aV~~Vr~Al  117 (137)
T d1st6a7          64 AVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAF  117 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSSSCCTTTTTHHHHTTTTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344566669999999999999999999999988776665555566666666555

>d1t01a2 a.24.9.1 (A:126-252) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=85.99  E-value=1.7  Score=27.99  Aligned_cols=50  Identities=16%  Similarity=0.219  Sum_probs=41.2

Q ss_pred             HHHHHHhhhhHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10581         13 HAEYHLKIYAPQLVTAARTLADHPSS-----KIAKENLEVFADMWQALVSDITTLCKEIMDK   69 (90)
Q Consensus        13 ~ae~~l~~l~PQVi~Aar~L~~~P~S-----k~A~En~d~f~~~W~~~v~~Lt~lvdei~d~   69 (90)
                      .|-..|+...|=++++-++...||++     .-|++|=|-.-       ..|+.++++|++.
T Consensus        68 ~ar~~Lk~~sp~L~ts~K~~v~~~~~~~~~~~eA~~NRd~v~-------~qm~~ai~~Ii~v  122 (127)
T d1t01a2          68 NSMNTVKELLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTV-------EKMSAEINEIIRV  122 (127)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTSSSSCHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHhCCCccccccHHHHHhHHHHH-------HHHHHHHHHHHHH
Confidence            34568999999999999999999997     78999998776       5666777777663

>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: VBS domain
domain: Talin 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.88  E-value=4.5  Score=25.06  Aligned_cols=45  Identities=27%  Similarity=0.170  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy10581          7 LQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADM   51 (90)
Q Consensus         7 L~vta~~ae~~l~~l~PQVi~Aar~L~~~P~Sk~A~En~d~f~~~   51 (90)
                      .|..-..+..+|-.=+=++|++++.++.+|++..++..+..-.+.
T Consensus        75 ~q~~ll~~ak~v~~s~~~Lv~aak~~~~nP~d~~~~~~L~~aAr~  119 (136)
T d2b0ha1          75 IGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECARR  119 (136)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Confidence            344455556667777889999999999999997776555444433