Psyllid ID: psy10612

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420------
MSCRGHSLVLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSEEF
ccccccccccccHHHHHHHcHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHccccccccccccEEEEcccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccEEcccccccccccccEEEEEcccccccccccccccccccccccEEEcccccccccEEEEEHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccHHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHccccEEEEEEcccccccccEEEEEcccccccEEEHHHHHHHHHHHHHHcccccccc
ccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccEEcHHHHHHHHHHHHHHHHHHHHcccEEcEcccEEEHHHHHHHcHHHHHHHHccEEEEccEEEEEccccHHHHHHHHcccccEHHHccEEEEEEEEEEccccHHHcEcccEccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHccccEEEEccccEccEcEEEEEEEcccccEEEEEEEEEEccHHHHccccEEcccccEEccEEEEEEEEEEHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHccccEEEEcccccHHcHHHHHHHHccccEEEEEcccHHcccEEEEEEccccccccccHHHHHHHHHHHHHHcccccccc
mscrghslvlpecgdsnrmmpiSFVLWNRkigreqelfffhelspgscffqtkgafIYNTLVEFIRSEyrkrgfqevvspnvynVKLWqtsghwahysenmfsfdvenetyalkpmncpghclifdhRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFnlrlstrpekyLGELEVWNKAEKQLEASLnsfgepwtenpgdgafygpkidititdalkrphqcatiqldfqlpiRFNLAYVnekgeknrpvMIHRAILGSVERMVAILTEsyagkwpfwisprqgivipvaepfneYADQVKNKIFAAgfmcdadldssdTLNKKIRNAQISQYNFIMVVGEkekssntvnvrtrdnivhgefsVDDVITRFGklkenrtlkseef
mscrghslvlpecgdsnrmmPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATiqldfqlpIRFNLAYvnekgeknrpvMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGekekssntvnvrtrdnivhgefsvddvitrfgklkenrtlkseef
MSCRGHSLVLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSEEF
********VLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEK*****TVNVRTRDNIVHGEFSVDDVITRFGK************
MSCRGHSLVLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKL***********
MSCRGHSLVLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSEEF
*SCRGHSLVLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKLKENR*******
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MSCRGHSLVLPECGDSNRMMPISFVLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSEEF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query426 2.2.26 [Sep-21-2011]
Q9D0R2722 Threonine--tRNA ligase, c yes N/A 0.934 0.551 0.739 0.0
Q3ZBV8723 Threonine--tRNA ligase, c yes N/A 0.934 0.550 0.744 0.0
Q5XHY5695 Threonine--tRNA ligase, c yes N/A 0.934 0.572 0.739 0.0
P26639723 Threonine--tRNA ligase, c yes N/A 0.934 0.550 0.736 1e-180
A2RTX5802 Probable threonine--tRNA no N/A 0.934 0.496 0.714 1e-175
Q8BLY2790 Probable threonine--tRNA no N/A 0.934 0.503 0.711 1e-174
Q0V9S0814 Probable threonine--tRNA no N/A 0.934 0.488 0.714 1e-174
P52709725 Threonine--tRNA ligase, c yes N/A 0.936 0.550 0.637 1e-155
Q54J66710 Probable threonine--tRNA yes N/A 0.908 0.545 0.635 1e-150
P87144703 Threonine--tRNA ligase, c yes N/A 0.866 0.524 0.659 1e-149
>sp|Q9D0R2|SYTC_MOUSE Threonine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Tars PE=1 SV=2 Back     alignment and function desciption
 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/399 (73%), Positives = 344/399 (86%), Gaps = 1/399 (0%)

Query: 28  NRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKL 87
           +RKIGR+QEL+FFHELSPGSCFF  KGA+IYNTL+EFIRSEYRKRGFQEVV+PN++N +L
Sbjct: 322 HRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRL 381

Query: 88  WQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHR 147
           W TSGHW HYSENMFSF+VE E +ALKPMNCPGHCL+FDHR RSWRELPLR+ADFGVLHR
Sbjct: 382 WMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHR 441

Query: 148 NELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRP 207
           NELSGALTGLTRVRRFQQDDAHIFC +EQI DEI G LDFLR VYS+FGF+F L LSTRP
Sbjct: 442 NELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRP 501

Query: 208 EKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQ 267
           EK+LG++E+WN+AEKQLE SLN FGE W  NPGDGAFYGPKIDI I DA+ R HQCATIQ
Sbjct: 502 EKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQ 561

Query: 268 LDFQLPIRFNLAYVNEKG-EKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGI 326
           LDFQLPIRFNL YV+  G +K RPV++HRAILGSVERM+AILTE+Y GKWPFW+SPRQ +
Sbjct: 562 LDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVM 621

Query: 327 VIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKS 386
           V+PV    +EYA +V+ +   A FM D DLD   TLNKKIRNAQ++QYNFI+VVGEKEK+
Sbjct: 622 VVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKA 681

Query: 387 SNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSEE 425
           S TVN+RTRDN VHGE +V++ + R  +LK+ R+ ++EE
Sbjct: 682 SGTVNIRTRDNKVHGERTVEETVRRLQQLKQTRSKQAEE 720

Mus musculus (taxid: 10090)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 3
>sp|Q3ZBV8|SYTC_BOVIN Threonine--tRNA ligase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1 Back     alignment and function description
>sp|Q5XHY5|SYTC_RAT Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Tars PE=2 SV=1 Back     alignment and function description
>sp|P26639|SYTC_HUMAN Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3 Back     alignment and function description
>sp|A2RTX5|SYTC2_HUMAN Probable threonine--tRNA ligase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1 Back     alignment and function description
>sp|Q8BLY2|SYTC2_MOUSE Probable threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus GN=Tarsl2 PE=2 SV=1 Back     alignment and function description
>sp|Q0V9S0|SYTC2_XENTR Probable threonine--tRNA ligase 2, cytoplasmic OS=Xenopus tropicalis GN=tarsl2 PE=2 SV=1 Back     alignment and function description
>sp|P52709|SYTC_CAEEL Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=trs-1 PE=2 SV=1 Back     alignment and function description
>sp|Q54J66|SYTC1_DICDI Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium discoideum GN=thrS1 PE=3 SV=1 Back     alignment and function description
>sp|P87144|SYTC_SCHPO Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ths1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query426
328710126 714 PREDICTED: threonyl-tRNA synthetase, cyt 0.931 0.556 0.811 0.0
242024338 717 Threonyl-tRNA synthetase, cytoplasmic, p 0.934 0.555 0.798 0.0
340717366 725 PREDICTED: threonyl-tRNA synthetase, cyt 0.934 0.548 0.781 0.0
350413351 690 PREDICTED: threonyl-tRNA synthetase, cyt 0.934 0.576 0.778 0.0
345484325 705 PREDICTED: threonyl-tRNA synthetase, cyt 0.934 0.564 0.788 0.0
158299584 761 AGAP008929-PA [Anopheles gambiae str. PE 0.936 0.524 0.764 0.0
312384017 766 hypothetical protein AND_02684 [Anophele 0.934 0.519 0.768 0.0
307169877 689 Threonyl-tRNA synthetase, cytoplasmic [C 0.931 0.576 0.770 0.0
383856199 712 PREDICTED: threonine--tRNA ligase, cytop 0.920 0.550 0.785 0.0
322796311 807 hypothetical protein SINV_16250 [Solenop 0.920 0.485 0.775 0.0
>gi|328710126|ref|XP_001950747.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/397 (81%), Positives = 363/397 (91%)

Query: 28  NRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKL 87
           +RKIGREQELFFFHELSPGSCFFQ KGA IYNTL+EFI+SEYRKRGFQEVVSPN+YNVKL
Sbjct: 315 HRKIGREQELFFFHELSPGSCFFQPKGAHIYNTLIEFIKSEYRKRGFQEVVSPNIYNVKL 374

Query: 88  WQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHR 147
           WQTSGHWAHY+ENMFSFDVE ETYALKPMNCPGHCL+FDHR RSWRELPLRMADFGVLHR
Sbjct: 375 WQTSGHWAHYAENMFSFDVEKETYALKPMNCPGHCLMFDHRNRSWRELPLRMADFGVLHR 434

Query: 148 NELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRP 207
           NELSGALTGLTRVRRFQQDDAHIFCT +QIG E++ +LDFLR+VY++FGFTF+LRLSTRP
Sbjct: 435 NELSGALTGLTRVRRFQQDDAHIFCTTDQIGQEMMSSLDFLRHVYTVFGFTFHLRLSTRP 494

Query: 208 EKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQ 267
           EKYLGELE+W  AEKQL  SLNSFGEPWT NPGDGAFYGPKIDITI+DALKR HQCATIQ
Sbjct: 495 EKYLGELEMWENAEKQLADSLNSFGEPWTLNPGDGAFYGPKIDITISDALKRQHQCATIQ 554

Query: 268 LDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIV 327
           LDFQLPIRFNL +++E GEK RPV+IHRAI GSVERM+AILTES+AGKWPFW+SPRQ IV
Sbjct: 555 LDFQLPIRFNLNFISESGEKKRPVIIHRAIFGSVERMIAILTESFAGKWPFWLSPRQAIV 614

Query: 328 IPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSS 387
           IPV   F+EY+++VK +I+ AGFMCD D+D  DTLNKKIRNAQ++QYNFI+VVG+KEK++
Sbjct: 615 IPVGPQFDEYSEKVKKEIYEAGFMCDVDVDHGDTLNKKIRNAQLAQYNFILVVGDKEKTA 674

Query: 388 NTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSE 424
           NTVNVRTRDN VHGEFS+++ I R  KLK ++T  SE
Sbjct: 675 NTVNVRTRDNNVHGEFSIEETIQRLQKLKISKTNNSE 711

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242024338|ref|XP_002432585.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] gi|212518045|gb|EEB19847.1| Threonyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|340717366|ref|XP_003397155.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350413351|ref|XP_003489967.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|345484325|ref|XP_001603180.2| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|158299584|ref|XP_319682.4| AGAP008929-PA [Anopheles gambiae str. PEST] gi|157013587|gb|EAA14818.5| AGAP008929-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312384017|gb|EFR28854.1| hypothetical protein AND_02684 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|307169877|gb|EFN62386.1| Threonyl-tRNA synthetase, cytoplasmic [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383856199|ref|XP_003703597.1| PREDICTED: threonine--tRNA ligase, cytoplasmic-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|322796311|gb|EFZ18882.1| hypothetical protein SINV_16250 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query426
UNIPROTKB|E2RHW7723 TARS "Uncharacterized protein" 0.934 0.550 0.744 7.6e-167
MGI|MGI:106314722 Tars "threonyl-tRNA synthetase 0.934 0.551 0.739 7.6e-167
FB|FBgn0027081747 Aats-thr "Threonyl-tRNA synthe 0.936 0.534 0.734 1.6e-166
UNIPROTKB|Q3ZBV8723 TARS "Threonine--tRNA ligase, 0.934 0.550 0.744 3.3e-166
RGD|1359527695 Tars "threonyl-tRNA synthetase 0.934 0.572 0.739 5.4e-166
UNIPROTKB|Q5XHY5695 Tars "Threonine--tRNA ligase, 0.934 0.572 0.739 5.4e-166
ZFIN|ZDB-GENE-041010-218718 tars "threonyl-tRNA synthetase 0.934 0.554 0.744 8.7e-166
UNIPROTKB|F1SP18620 TARS "Uncharacterized protein" 0.934 0.641 0.736 6.2e-165
UNIPROTKB|E7ERI3602 TARS "Threonine--tRNA ligase, 0.934 0.661 0.736 1.3e-164
UNIPROTKB|G3XAN9619 TARS "Threonyl-tRNA synthetase 0.934 0.642 0.736 1.3e-164
UNIPROTKB|E2RHW7 TARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 1623 (576.4 bits), Expect = 7.6e-167, P = 7.6e-167
 Identities = 297/399 (74%), Positives = 344/399 (86%)

Query:    28 NRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKL 87
             +RKIGR+QEL+FFHELSPGSCFF  KGA+IYNTL+EFIRSEYRKRGFQEVV+PN+YN +L
Sbjct:   323 HRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEVVTPNIYNSRL 382

Query:    88 WQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHR 147
             W TSGHW HYSENMFSF+VE E +ALKPMNCPGHCL+FDHR RSWRELPLR+ADFGVLHR
Sbjct:   383 WMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRIADFGVLHR 442

Query:   148 NELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRP 207
             NELSGALTGLTRVRRFQQDDAHIFC +EQI DEI G LDFLR VYSIFGF+F L LSTRP
Sbjct:   443 NELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYSIFGFSFKLNLSTRP 502

Query:   208 EKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQ 267
             EKYLG++EVWN+AEKQLE SLN FGE W  NPGDGAFYGPKIDI I DA+ R HQCATIQ
Sbjct:   503 EKYLGDIEVWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRFHQCATIQ 562

Query:   268 LDFQLPIRFNLAYVNEKGE-KNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGI 326
             LDFQLPIRFNL +V+  G+ K RPV++HRAILGSVERM+AILTE+Y GKWPFW+SPRQ +
Sbjct:   563 LDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVM 622

Query:   327 VIPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKS 386
             V+PV    +EYA +V+ +   A FM D DLD   TLNKKIRNAQ++QYNFI+V+GEKEK+
Sbjct:   623 VVPVGPTCDEYAQKVRQQFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVIGEKEKA 682

Query:   387 SNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRTLKSEE 425
             S TVN+RTRDN VHGE ++ + I R  +LK++R+ ++EE
Sbjct:   683 SGTVNIRTRDNKVHGERTILETIERLQQLKQSRSKQAEE 721
GO:0015629 "actin cytoskeleton" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0006435 "threonyl-tRNA aminoacylation" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0004829 "threonine-tRNA ligase activity" evidence=IEA
MGI|MGI:106314 Tars "threonyl-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0027081 Aats-thr "Threonyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZBV8 TARS "Threonine--tRNA ligase, cytoplasmic" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1359527 Tars "threonyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5XHY5 Tars "Threonine--tRNA ligase, cytoplasmic" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041010-218 tars "threonyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SP18 TARS "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E7ERI3 TARS "Threonine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G3XAN9 TARS "Threonyl-tRNA synthetase, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A7FY87SYT_CLOB16, ., 1, ., 1, ., 30.43250.92010.6173yesN/A
Q9D0R2SYTC_MOUSE6, ., 1, ., 1, ., 30.73930.93420.5512yesN/A
B0S169SYT_FINM26, ., 1, ., 1, ., 30.45660.91780.6167yesN/A
C5B846SYT_EDWI96, ., 1, ., 1, ., 30.44860.93190.6183yesN/A
A5I6L8SYT_CLOBH6, ., 1, ., 1, ., 30.43250.92010.6173yesN/A
Q5XHY5SYTC_RAT6, ., 1, ., 1, ., 30.73930.93420.5726yesN/A
Q3ZBV8SYTC_BOVIN6, ., 1, ., 1, ., 30.74430.93420.5504yesN/A
B8FN26SYT_DESAA6, ., 1, ., 1, ., 30.46110.93420.6257yesN/A
Q6MML0SYT_BDEBA6, ., 1, ., 1, ., 30.44330.92720.6021yesN/A
P87144SYTC_SCHPO6, ., 1, ., 1, ., 30.65960.86610.5248yesN/A
Q8SRH2SYTC_ENCCU6, ., 1, ., 1, ., 30.55640.89670.5968yesN/A
O04630SYTM_ARATH6, ., 1, ., 1, ., 30.61390.90140.5416yesN/A
A5EVK6SYT_DICNV6, ., 1, ., 1, ., 30.44470.92950.6187yesN/A
Q60AZ3SYT_METCA6, ., 1, ., 1, ., 30.45310.92250.6159yesN/A
Q891T0SYT_CLOTE6, ., 1, ., 1, ., 30.43180.92720.6181yesN/A
B9KAN7SYT_THENN6, ., 1, ., 1, ., 30.45450.92480.6156yesN/A
A3DET1SYT_CLOTH6, ., 1, ., 1, ., 30.45400.91780.6157yesN/A
A0PZN1SYT_CLONN6, ., 1, ., 1, ., 30.45030.92010.6153yesN/A
Q189B8SYT_CLOD66, ., 1, ., 1, ., 30.47440.91780.6118yesN/A
P04801SYTC_YEAST6, ., 1, ., 1, ., 30.60400.91780.5326yesN/A
Q6M9L0SYT_PARUW6, ., 1, ., 1, ., 30.44580.92720.6076yesN/A
C1FKN0SYT_CLOBJ6, ., 1, ., 1, ., 30.43510.92010.6173yesN/A
A4J4Y7SYT_DESRM6, ., 1, ., 1, ., 30.45820.92010.6173yesN/A
Q54J66SYTC1_DICDI6, ., 1, ., 1, ., 30.63580.90840.5450yesN/A
P52709SYTC_CAEEL6, ., 1, ., 1, ., 30.63770.93660.5503yesN/A
P26639SYTC_HUMAN6, ., 1, ., 1, ., 30.73680.93420.5504yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.1.1.30.914
3rd Layer6.1.10.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
PLN02908686 PLN02908, PLN02908, threonyl-tRNA synthetase 0.0
PRK00413638 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed 0.0
PRK12305575 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed 0.0
cd00771298 cd00771, ThrRS_core, Threonyl-tRNA synthetase (Thr 0.0
COG0441589 COG0441, ThrS, Threonyl-tRNA synthetase [Translati 0.0
TIGR00418563 TIGR00418, thrS, threonyl-tRNA synthetase 1e-179
PRK12444639 PRK12444, PRK12444, threonyl-tRNA synthetase; Revi 1e-152
PLN02837614 PLN02837, PLN02837, threonine-tRNA ligase 1e-120
PRK14799545 PRK14799, thrS, threonyl-tRNA synthetase; Provisio 1e-115
pfam00587171 pfam00587, tRNA-synt_2b, tRNA synthetase class II 2e-49
PRK03991613 PRK03991, PRK03991, threonyl-tRNA synthetase; Vali 9e-47
cd0086091 cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon 2e-31
cd00670235 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro 4e-25
pfam0312993 pfam03129, HGTP_anticodon, Anticodon binding domai 2e-18
cd00768211 cd00768, class_II_aaRS-like_core, Class II tRNA am 4e-15
PRK14938387 PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provi 2e-08
TIGR00408472 TIGR00408, proS_fam_I, prolyl-tRNA synthetase, fam 3e-07
TIGR00409 568 TIGR00409, proS_fam_II, prolyl-tRNA synthetase, fa 3e-07
cd00779255 cd00779, ProRS_core_prok, Prolyl-tRNA synthetase ( 9e-06
COG0442500 COG0442, ProS, Prolyl-tRNA synthetase [Translation 2e-05
cd0073894 cd00738, HGTP_anticodon, HGTP anticodon binding do 1e-04
cd00772264 cd00772, ProRS_core, Prolyl-tRNA synthetase (ProRS 2e-04
COG0172429 COG0172, SerS, Seryl-tRNA synthetase [Translation, 3e-04
TIGR00414418 TIGR00414, serS, seryl-tRNA synthetase 4e-04
TIGR00442397 TIGR00442, hisS, histidyl-tRNA synthetase 6e-04
>gnl|CDD|178496 PLN02908, PLN02908, threonyl-tRNA synthetase Back     alignment and domain information 
 Score =  705 bits (1821), Expect = 0.0
 Identities = 257/393 (65%), Positives = 319/393 (81%), Gaps = 2/393 (0%)

Query: 29  RKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLW 88
           R +G++QELFFFHELSPGSCFF   GA IYN L++FIR +Y +RG+ EV++PN+YN+ LW
Sbjct: 295 RLLGQKQELFFFHELSPGSCFFLPHGARIYNKLMDFIREQYWERGYDEVITPNIYNMDLW 354

Query: 89  QTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRN 148
           +TSGH AHY ENMF F++E + + LKPMNCPGHCL+F HRVRS+RELPLR+ADFGVLHRN
Sbjct: 355 ETSGHAAHYKENMFVFEIEKQEFGLKPMNCPGHCLMFAHRVRSYRELPLRLADFGVLHRN 414

Query: 149 ELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPE 208
           ELSGALTGLTRVRRFQQDDAHIFC  +QI DE+ G LDFL  VY +FGFT+ L+LSTRPE
Sbjct: 415 ELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFTYELKLSTRPE 474

Query: 209 KYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQL 268
           KYLG+LE W+KAE  L  +LN+FG+PW  N GDGAFYGPKIDIT++DALKR  QCAT+QL
Sbjct: 475 KYLGDLETWDKAEAALTEALNAFGKPWQLNEGDGAFYGPKIDITVSDALKRKFQCATVQL 534

Query: 269 DFQLPIRFNLAYVNEKGEK-NRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIV 327
           DFQLPIRF L+Y  E   K  RPVMIHRAILGSVERM AIL E YAGKWPFW+SPRQ IV
Sbjct: 535 DFQLPIRFKLSYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYAGKWPFWLSPRQAIV 594

Query: 328 IPVAEPFNEYADQVKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSS 387
           +P++E   +YA++V+ ++ AAGF  D D+ +   + KK+R AQ++QYN+I+VVGE E ++
Sbjct: 595 VPISEKSQDYAEEVRAQLHAAGFYVDVDV-TDRKIQKKVREAQLAQYNYILVVGEAEAAT 653

Query: 388 NTVNVRTRDNIVHGEFSVDDVITRFGKLKENRT 420
            TVNVRTRDN+VHGE  +++++T F + +    
Sbjct: 654 GTVNVRTRDNVVHGEKKIEELLTEFKEERAEFK 686

Length = 686
>gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|238394 cd00771, ThrRS_core, Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|223518 COG0441, ThrS, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232967 TIGR00418, thrS, threonyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|183530 PRK12444, PRK12444, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215450 PLN02837, PLN02837, threonine-tRNA ligase Back     alignment and domain information
>gnl|CDD|184826 PRK14799, thrS, threonyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|216009 pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T) Back     alignment and domain information
>gnl|CDD|235190 PRK03991, PRK03991, threonyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|238437 cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon binding domain Back     alignment and domain information
>gnl|CDD|238359 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information
>gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain Back     alignment and domain information
>gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>gnl|CDD|184902 PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|232961 TIGR00408, proS_fam_I, prolyl-tRNA synthetase, family I Back     alignment and domain information
>gnl|CDD|232962 TIGR00409, proS_fam_II, prolyl-tRNA synthetase, family II Back     alignment and domain information
>gnl|CDD|238402 cd00779, ProRS_core_prok, Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|223519 COG0442, ProS, Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|238379 cd00738, HGTP_anticodon, HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) Back     alignment and domain information
>gnl|CDD|238395 cd00772, ProRS_core, Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|223250 COG0172, SerS, Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232965 TIGR00414, serS, seryl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 426
PRK14799545 thrS threonyl-tRNA synthetase; Provisional 100.0
PRK12444639 threonyl-tRNA synthetase; Reviewed 100.0
PLN02908686 threonyl-tRNA synthetase 100.0
PRK12305575 thrS threonyl-tRNA synthetase; Reviewed 100.0
PLN02837614 threonine-tRNA ligase 100.0
PRK00413638 thrS threonyl-tRNA synthetase; Reviewed 100.0
TIGR00418563 thrS threonyl-tRNA synthetase. This model represen 100.0
PRK03991613 threonyl-tRNA synthetase; Validated 100.0
COG0441589 ThrS Threonyl-tRNA synthetase [Translation, riboso 100.0
KOG1637|consensus560 100.0
PRK12325439 prolyl-tRNA synthetase; Provisional 100.0
PRK09194565 prolyl-tRNA synthetase; Provisional 100.0
TIGR00408472 proS_fam_I prolyl-tRNA synthetase, family I. Proly 100.0
TIGR00409568 proS_fam_II prolyl-tRNA synthetase, family II. Pro 100.0
PRK08661477 prolyl-tRNA synthetase; Provisional 100.0
COG0124429 HisS Histidyl-tRNA synthetase [Translation, riboso 100.0
cd00771298 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class 100.0
PRK04173456 glycyl-tRNA synthetase; Provisional 100.0
KOG2324|consensus457 100.0
CHL00201430 syh histidine-tRNA synthetase; Provisional 100.0
COG0442500 ProS Prolyl-tRNA synthetase [Translation, ribosoma 100.0
PLN02530487 histidine-tRNA ligase 100.0
PLN02972763 Histidyl-tRNA synthetase 100.0
PRK00037412 hisS histidyl-tRNA synthetase; Reviewed 100.0
PRK12420423 histidyl-tRNA synthetase; Provisional 100.0
TIGR00442397 hisS histidyl-tRNA synthetase. This model finds a 100.0
TIGR00389551 glyS_dimeric glycyl-tRNA synthetase, dimeric type. 100.0
KOG1936|consensus518 100.0
PRK14894539 glycyl-tRNA synthetase; Provisional 100.0
cd00778261 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) 100.0
COG0423558 GRS1 Glycyl-tRNA synthetase (class II) [Translatio 100.0
cd00779255 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla 100.0
PLN02734684 glycyl-tRNA synthetase 100.0
cd00772264 ProRS_core Prolyl-tRNA synthetase (ProRS) class II 100.0
cd00770297 SerRS_core Seryl-tRNA synthetase (SerRS) class II 100.0
PRK05431425 seryl-tRNA synthetase; Provisional 100.0
TIGR00414418 serS seryl-tRNA synthetase. This model represents 100.0
PRK12292391 hisZ ATP phosphoribosyltransferase regulatory subu 100.0
KOG4163|consensus551 100.0
PLN02678448 seryl-tRNA synthetase 100.0
cd00670235 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t 100.0
PRK12421392 ATP phosphoribosyltransferase regulatory subunit; 100.0
PRK00960517 seryl-tRNA synthetase; Provisional 100.0
PLN02320502 seryl-tRNA synthetase 99.97
TIGR00415520 serS_MJ seryl-tRNA synthetase, Methanococcus janna 99.97
KOG2298|consensus599 99.97
PF00587173 tRNA-synt_2b: tRNA synthetase class II core domain 99.97
COG0172429 SerS Seryl-tRNA synthetase [Translation, ribosomal 99.96
cd00774254 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik 99.95
TIGR00443314 hisZ_biosyn_reg ATP phosphoribosyltransferase, reg 99.93
KOG2509|consensus455 99.93
cd00773261 HisRS-like_core Class II Histidinyl-tRNA synthetas 99.93
PRK12293281 hisZ ATP phosphoribosyltransferase regulatory subu 99.93
PF13393311 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI 99.92
PRK12295373 hisZ ATP phosphoribosyltransferase regulatory subu 99.88
COG3705390 HisZ ATP phosphoribosyltransferase involved in his 99.86
cd00862202 ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin 99.82
cd02426128 Pol_gamma_b_Cterm C-terminal domain of mitochondri 99.82
cd00858121 GlyRS_anticodon GlyRS Glycyl-anticodon binding dom 99.8
PF0312994 HGTP_anticodon: Anticodon binding domain; InterPro 99.77
PRK14938387 Ser-tRNA(Thr) hydrolase; Provisional 99.74
cd0086194 ProRS_anticodon_short ProRS Prolyl-anticodon bindi 99.73
cd00768211 class_II_aaRS-like_core Class II tRNA amino-acyl s 99.73
TIGR02367453 PylS pyrrolysyl-tRNA synthetase. PylS is the archa 99.69
cd0086091 ThrRS_anticodon ThrRS Threonyl-anticodon binding d 99.68
PRK12294272 hisZ ATP phosphoribosyltransferase regulatory subu 99.68
cd0073894 HGTP_anticodon HGTP anticodon binding domain, as f 99.62
PRK09537417 pylS pyrolysyl-tRNA synthetase; Reviewed 99.62
PRK07080317 hypothetical protein; Validated 99.53
PRK04172489 pheS phenylalanyl-tRNA synthetase subunit alpha; P 99.47
cd0085991 HisRS_anticodon HisRS Histidyl-anticodon binding d 99.38
PTZ00326494 phenylalanyl-tRNA synthetase alpha chain; Provisio 99.12
PRK09350306 poxB regulator PoxA; Provisional 98.99
cd00669269 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl 98.97
KOG1035|consensus1351 98.84
PF01409247 tRNA-synt_2d: tRNA synthetases class II core domai 98.62
cd00776322 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class 98.59
COG0173585 AspS Aspartyl-tRNA synthetase [Translation, riboso 98.58
cd00777280 AspRS_core Asp tRNA synthetase (aspRS) class II co 98.55
PF00152335 tRNA-synt_2: tRNA synthetases class II (D, K and N 98.53
cd00775329 LysRS_core Lys_tRNA synthetase (LysRS) class II co 98.44
PF12745 273 HGTP_anticodon2: Anticodon binding domain of tRNAs 98.41
TIGR00462304 genX lysyl-tRNA synthetase-like protein GenX. Many 98.38
cd00496218 PheRS_alpha_core Phenylalanyl-tRNA synthetase (Phe 98.36
TIGR00459583 aspS_bact aspartyl-tRNA synthetase, bacterial type 98.35
TIGR00468294 pheS phenylalanyl-tRNA synthetase, alpha subunit. 98.35
PRK00484491 lysS lysyl-tRNA synthetase; Reviewed 98.34
TIGR00458428 aspS_arch aspartyl-tRNA synthetase, archaeal type. 98.34
COG0016335 PheS Phenylalanyl-tRNA synthetase alpha subunit [T 98.34
PRK06462335 asparagine synthetase A; Reviewed 98.33
PRK00476588 aspS aspartyl-tRNA synthetase; Validated 98.32
PTZ00417585 lysine-tRNA ligase; Provisional 98.31
PTZ00385659 lysyl-tRNA synthetase; Provisional 98.31
PRK05159437 aspC aspartyl-tRNA synthetase; Provisional 98.29
PLN02903652 aminoacyl-tRNA ligase 98.27
PRK00488339 pheS phenylalanyl-tRNA synthetase subunit alpha; V 98.25
PRK12445505 lysyl-tRNA synthetase; Reviewed 98.25
TIGR00499496 lysS_bact lysyl-tRNA synthetase, eukaryotic and no 98.25
COG2269322 Truncated, possibly inactive, lysyl-tRNA synthetas 98.23
COG0442 500 ProS Prolyl-tRNA synthetase [Translation, ribosoma 98.2
PLN02502553 lysyl-tRNA synthetase 98.2
PRK03932450 asnC asparaginyl-tRNA synthetase; Validated 98.19
PLN02850530 aspartate-tRNA ligase 98.18
PRK12820 706 bifunctional aspartyl-tRNA synthetase/aspartyl/glu 98.17
KOG2411|consensus628 98.13
TIGR00457453 asnS asparaginyl-tRNA synthetase. In a multiple se 98.08
PRK029831094 lysS lysyl-tRNA synthetase; Provisional 98.03
PLN02853492 Probable phenylalanyl-tRNA synthetase alpha chain 98.01
PTZ00401550 aspartyl-tRNA synthetase; Provisional 97.92
PTZ00425586 asparagine-tRNA ligase; Provisional 97.91
COG0017435 AsnS Aspartyl/asparaginyl-tRNA synthetases [Transl 97.85
PLN02603565 asparaginyl-tRNA synthetase 97.79
PLN02221572 asparaginyl-tRNA synthetase 97.72
PLN02532633 asparagine-tRNA synthetase 97.66
COG1190502 LysU Lysyl-tRNA synthetase (class II) [Translation 97.57
TIGR00470533 sepS O-phosphoseryl-tRNA(Cys) synthetase. This fam 97.49
PRK09616552 pheT phenylalanyl-tRNA synthetase subunit beta; Re 97.47
KOG1885|consensus560 97.39
PLN02788402 phenylalanine-tRNA synthetase 96.78
cd00769198 PheRS_beta_core Phenylalanyl-tRNA synthetase (PheR 96.64
KOG0554|consensus446 96.25
TIGR00471551 pheT_arch phenylalanyl-tRNA synthetase, beta subun 96.16
KOG0556|consensus533 95.99
KOG2784|consensus483 95.55
PLN02265597 probable phenylalanyl-tRNA synthetase beta chain 94.81
TIGR00469460 pheS_mito phenylalanyl-tRNA synthetase, mitochondr 94.71
COG2024536 Phenylalanyl-tRNA synthetase alpha subunit (archae 93.72
PRK06253529 O-phosphoseryl-tRNA synthetase; Reviewed 93.63
KOG0555|consensus545 92.11
CHL00192704 syfB phenylalanyl-tRNA synthetase beta chain; Prov 90.96
COG0072650 PheT Phenylalanyl-tRNA synthetase beta subunit [Tr 90.52
TIGR00472798 pheT_bact phenylalanyl-tRNA synthetase, beta subun 84.24
PRK00629791 pheT phenylalanyl-tRNA synthetase subunit beta; Re 83.72
>PRK14799 thrS threonyl-tRNA synthetase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.2e-73  Score=587.17  Aligned_cols=395  Identities=41%  Similarity=0.710  Sum_probs=373.2

Q ss_pred             ChhHHHHHHhcCCcccc-cCCCcceeeccchHHHHHHHHHHHHHHHHHcCCeEeecccccchhhHhHhcccccccccceE
Q psy10612         25 VLWNRKIGREQELFFFH-ELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFS  103 (426)
Q Consensus        25 ~~~h~~l~~~~~l~~~~-~~~~G~~~~lP~~~~~~~~i~~~i~~~~~~~G~~~i~tP~l~~~~l~~~sg~~~~~~~e~y~  103 (426)
                      ..|||+||++++||++. ..++|+++|+|.|+.+++.|++++++.+.++||++|.||.++..++|..||||+.+.++||.
T Consensus       137 ~rdHr~lg~~l~lf~~~~~~~~G~~~~lP~G~~i~~~L~~~~r~~~~~~Gy~eV~TP~i~~~eL~k~SGh~~~y~~~mf~  216 (545)
T PRK14799        137 ETDHRLIGEKLDLFSFHEEAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIV  216 (545)
T ss_pred             cCCHHHHHHHcCCcccccccCCcceEEcChHHHHHHHHHHHHHHHHHHcCCeEEECCccchHHHHhhccccccchhhcce
Confidence            57999999999999886 46899999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCceEEEcCCCcHHHHHHHhhhhcCcCCCCceeeeeccccccCCCCCCCCCccceeEeEcCeeEecCccchHHHHHH
Q psy10612        104 FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVG  183 (426)
Q Consensus       104 ~~d~~~~~~LrP~~t~~i~~~~~~~~~~~~~lP~k~~~~g~~fR~E~~~~~~Gl~R~REF~q~d~~~fg~~~~~~~e~~~  183 (426)
                      ++..+++++||||+|++++++|+++..||++||+|+|++|+|||+|.++..+||+|+|||+|.|+|+||.++++.+|+..
T Consensus       217 ~~~~~e~~~LrPm~cp~~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~RvReF~Q~DaHif~~~~q~~~E~~~  296 (545)
T PRK14799        217 FNMEGDEYGVKPMNCPAHILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKM  296 (545)
T ss_pred             eeccCceEEeccCCCHHHHHHHhccccChhhCCHhhEEecceecCCCCCCccccccceeEEEcccEEEeCHHHHHHHHHH
Confidence            95558999999999999999999999999999999999999999999998899999999999999999999888889888


Q ss_pred             HHHHHHHHHHHcCCe---EEEEEecCCCccCCCchhHHHHHHHHHHhhccCCCCceeCCCCCccccCccceeeecccCCc
Q psy10612        184 ALDFLRNVYSIFGFT---FNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRP  260 (426)
Q Consensus       184 ~~~~~~~il~~lgi~---~~i~~~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  260 (426)
                      +++++.++++.||++   +.+.+++||.+++|.++.|+++++.+++.|.+.|.++...++.++|++|++++.+.|++++.
T Consensus       297 ~l~~i~~vy~~fG~~~~~~~i~ls~Rpe~~~G~~~~wdka~~~l~~~L~~~gl~~~~~~g~gafygpkiD~~v~dalgr~  376 (545)
T PRK14799        297 LISKTVEVWHKFGFKDDDIKPYLSTRPDESIGSDELWEKATNALISALQESGLKFGIKEKEGAFYGPKIDFEIRDSLGRW  376 (545)
T ss_pred             HHHHHHHHHHHhCCCcccEEEEEEcChhhhcCCHHHHHHHHHHHHHHHHHcCCCeEEecceeccccCccceEehhhcCch
Confidence            889999999999995   89999999988899999999999999999999999999988999999999998888999999


Q ss_pred             eeeeeeeeeecCCeEEeEEEeCCCCccccCEEEecccccchHHHHHHHHHhcCCCCCCCCCCceEEEEeCCCChHHHHHH
Q psy10612        261 HQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKWPFWISPRQGIVIPVAEPFNEYADQ  340 (426)
Q Consensus       261 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~GgleRll~~l~e~~g~~~p~~~ap~~V~Vi~~~~~~~~~a~~  340 (426)
                      |+|+++++||+++.+|+++|.+.++...+|+.+|++++||+||++++|++++.+.||.|++|.||+|+|++++..++|.+
T Consensus       377 ~q~~Tiqldf~lp~rf~Ley~~~~~~~~~pv~ihr~~~GgiERli~iL~e~~~G~~P~wlaP~qV~Iipi~e~~~~~A~~  456 (545)
T PRK14799        377 WQLSTIQVDFNLPERFKLEYIDKDGIKKRPVMVHRAIYGSIDRFVAILLEHFKGKLPTWLSSVQVRVLPITDEVNEYAEK  456 (545)
T ss_pred             hhhhhhhhhcCcccccceEEEcCCCCCcccEEEEccCCCCHHHHHHHHHHHcCCCCCCCCCCceEEEEEcCHHHHHHHHH
Confidence            99999999999999999999998887778999998888899999999988755679999999999999999888899999


Q ss_pred             HHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHhCCcEEEEEecCccCCCeEEEEEccCCeeeeecHHHHHHHHHHHHhhcc
Q psy10612        341 VKNKIFAAGFMCDADLDSSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGEFSVDDVITRFGKLKENRT  420 (426)
Q Consensus       341 ia~~Lr~~Gi~v~~d~~~~~~lgkk~~~A~~~gip~~iiiG~~E~~~~~v~vk~~~~~~q~~v~~~el~~~i~~~~~~~~  420 (426)
                      |++.||++|++|++|+ ++.++++|+++|++.|+||++|||++|+++|+|+||+|++++|..++++++++.+.+.++.+.
T Consensus       457 Ia~~LR~~GirVelD~-~~~~lgkkir~A~k~gip~viIIG~~E~e~~~VtVR~r~~~eq~~v~l~eli~~l~~~i~~~~  535 (545)
T PRK14799        457 VLNDMRKRRIRAEIDY-AGETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQRD  535 (545)
T ss_pred             HHHHHHhCCCEEEEEC-CCCCHHHHHHHHHHcCCCEEEEEChhHhhcCeEEEEECCCCceEEEcHHHHHHHHHHHHhhcc
Confidence            9999999999999999 588999999999999999999999999999999999999999999999999999998888764

>PRK12444 threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02908 threonyl-tRNA synthetase Back     alignment and domain information
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02837 threonine-tRNA ligase Back     alignment and domain information
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00418 thrS threonyl-tRNA synthetase Back     alignment and domain information
>PRK03991 threonyl-tRNA synthetase; Validated Back     alignment and domain information
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1637|consensus Back     alignment and domain information
>PRK12325 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK09194 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I Back     alignment and domain information
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II Back     alignment and domain information
>PRK08661 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain Back     alignment and domain information
>PRK04173 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG2324|consensus Back     alignment and domain information
>CHL00201 syh histidine-tRNA synthetase; Provisional Back     alignment and domain information
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02530 histidine-tRNA ligase Back     alignment and domain information
>PLN02972 Histidyl-tRNA synthetase Back     alignment and domain information
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12420 histidyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00442 hisS histidyl-tRNA synthetase Back     alignment and domain information
>TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type Back     alignment and domain information
>KOG1936|consensus Back     alignment and domain information
>PRK14894 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>PLN02734 glycyl-tRNA synthetase Back     alignment and domain information
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>cd00770 SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain Back     alignment and domain information
>PRK05431 seryl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00414 serS seryl-tRNA synthetase Back     alignment and domain information
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>KOG4163|consensus Back     alignment and domain information
>PLN02678 seryl-tRNA synthetase Back     alignment and domain information
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>PRK00960 seryl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02320 seryl-tRNA synthetase Back     alignment and domain information
>TIGR00415 serS_MJ seryl-tRNA synthetase, Methanococcus jannaschii family Back     alignment and domain information
>KOG2298|consensus Back     alignment and domain information
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes Back     alignment and domain information
>COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain Back     alignment and domain information
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit Back     alignment and domain information
>KOG2509|consensus Back     alignment and domain information
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Back     alignment and domain information
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A Back     alignment and domain information
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] Back     alignment and domain information
>cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea Back     alignment and domain information
>cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity Back     alignment and domain information
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain Back     alignment and domain information
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis Back     alignment and domain information
>PRK14938 Ser-tRNA(Thr) hydrolase; Provisional Back     alignment and domain information
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria Back     alignment and domain information
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>TIGR02367 PylS pyrrolysyl-tRNA synthetase Back     alignment and domain information
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain Back     alignment and domain information
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) Back     alignment and domain information
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK07080 hypothetical protein; Validated Back     alignment and domain information
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional Back     alignment and domain information
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain Back     alignment and domain information
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional Back     alignment and domain information
>PRK09350 poxB regulator PoxA; Provisional Back     alignment and domain information
>cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain Back     alignment and domain information
>KOG1035|consensus Back     alignment and domain information
>PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00776 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain Back     alignment and domain information
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain Back     alignment and domain information
>PF00152 tRNA-synt_2: tRNA synthetases class II (D, K and N) ; InterPro: IPR004364 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00775 LysRS_core Lys_tRNA synthetase (LysRS) class II core domain Back     alignment and domain information
>PF12745 HGTP_anticodon2: Anticodon binding domain of tRNAs; InterPro: IPR024435 This is an anticodon binding domain, found largely on Gcn2 proteins which bind tRNA to down regulate translation in certain stress situations [] Back     alignment and domain information
>TIGR00462 genX lysyl-tRNA synthetase-like protein GenX Back     alignment and domain information
>cd00496 PheRS_alpha_core Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain Back     alignment and domain information
>TIGR00459 aspS_bact aspartyl-tRNA synthetase, bacterial type Back     alignment and domain information
>TIGR00468 pheS phenylalanyl-tRNA synthetase, alpha subunit Back     alignment and domain information
>PRK00484 lysS lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00458 aspS_arch aspartyl-tRNA synthetase, archaeal type Back     alignment and domain information
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06462 asparagine synthetase A; Reviewed Back     alignment and domain information
>PRK00476 aspS aspartyl-tRNA synthetase; Validated Back     alignment and domain information
>PTZ00417 lysine-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00385 lysyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02903 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated Back     alignment and domain information
>PRK12445 lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00499 lysS_bact lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial Back     alignment and domain information
>COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02502 lysyl-tRNA synthetase Back     alignment and domain information
>PRK03932 asnC asparaginyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02850 aspartate-tRNA ligase Back     alignment and domain information
>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional Back     alignment and domain information
>KOG2411|consensus Back     alignment and domain information
>TIGR00457 asnS asparaginyl-tRNA synthetase Back     alignment and domain information
>PRK02983 lysS lysyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02853 Probable phenylalanyl-tRNA synthetase alpha chain Back     alignment and domain information
>PTZ00401 aspartyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00425 asparagine-tRNA ligase; Provisional Back     alignment and domain information
>COG0017 AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02603 asparaginyl-tRNA synthetase Back     alignment and domain information
>PLN02221 asparaginyl-tRNA synthetase Back     alignment and domain information
>PLN02532 asparagine-tRNA synthetase Back     alignment and domain information
>COG1190 LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00470 sepS O-phosphoseryl-tRNA(Cys) synthetase Back     alignment and domain information
>PRK09616 pheT phenylalanyl-tRNA synthetase subunit beta; Reviewed Back     alignment and domain information
>KOG1885|consensus Back     alignment and domain information
>PLN02788 phenylalanine-tRNA synthetase Back     alignment and domain information
>cd00769 PheRS_beta_core Phenylalanyl-tRNA synthetase (PheRS) beta chain core domain Back     alignment and domain information
>KOG0554|consensus Back     alignment and domain information
>TIGR00471 pheT_arch phenylalanyl-tRNA synthetase, beta subunit Back     alignment and domain information
>KOG0556|consensus Back     alignment and domain information
>KOG2784|consensus Back     alignment and domain information
>PLN02265 probable phenylalanyl-tRNA synthetase beta chain Back     alignment and domain information
>TIGR00469 pheS_mito phenylalanyl-tRNA synthetase, mitochondrial Back     alignment and domain information
>COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06253 O-phosphoseryl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0555|consensus Back     alignment and domain information
>CHL00192 syfB phenylalanyl-tRNA synthetase beta chain; Provisional Back     alignment and domain information
>COG0072 PheT Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00472 pheT_bact phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial Back     alignment and domain information
>PRK00629 pheT phenylalanyl-tRNA synthetase subunit beta; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
3ugq_A460 Crystal Structure Of The Apo Form Of The Yeast Mito 1e-101
1qf6_A642 Structure Of E. Coli Threonyl-Trna Synthetase Compl 5e-99
1evk_A401 Crystal Structure Of A Truncated Form Of Threonyl-T 6e-99
1nyq_A645 Structure Of Staphylococcus Aureus Threonyl-Trna Sy 2e-78
3a32_A471 Crystal Structure Of Putative Threonyl-Trna Synthet 1e-46
3a31_A471 Crystal Structure Of Putative Threonyl-Trna Synthet 1e-43
3ial_A 518 Giardia Lamblia Prolyl-Trna Synthetase In Complex W 9e-09
2j3l_A 572 Prolyl-Trna Synthetase From Enterococcus Faecalis C 8e-06
>pdb|3UGQ|A Chain A, Crystal Structure Of The Apo Form Of The Yeast Mitochondrial Threonyl- Trna Synthetase Determined At 2.1 Angstrom Resolution Length = 460 Back     alignment and structure 
Iteration: 1

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/419 (43%), Positives = 269/419 (64%), Gaps = 31/419 (7%)
Query: 31  IGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYR-KRGFQEVVSPNVYNVKLWQ 89
           + + Q+LF    LSPGS FF   GA I+N L+EF++ + + K GF EVV+P +Y   LW+
Sbjct: 40  VSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWE 99
Query: 90  TSGHWAHYSENMF---SFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLH 146
            SGHW +Y+++MF   + D E E Y LKPMNCPGHCLIF  + RS+ ELPLR +DF  LH
Sbjct: 100 KSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLH 159
Query: 147 RNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS-IFGFT------- 198
           RNE SGAL+GLTR+R+F QDD HIFCT  Q+  EI  +L  +  VY+ IF F        
Sbjct: 160 RNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAE 219
Query: 199 --FNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDA 256
             + +  STRP+ ++G+L+VWN AE+ L+  L   G+PW  NPGDGAFYGPK+DI +TD 
Sbjct: 220 SNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDH 279
Query: 257 LKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGKW 316
           L++ HQ ATIQLDFQLP RF+L + ++     RP+MIHRA  GS+ER +A+L +S  G+W
Sbjct: 280 LRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRW 339
Query: 317 PFWISPRQGIVIPVAEPFNEYAD-------QVKNKIFAA--------GFMCDADLD-SSD 360
           PFW++P Q ++IPV     +  D       +++N++ A          +  + DLD  ++
Sbjct: 340 PFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIRNE 399
Query: 361 TLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGE-FSVDDVITRFGKLKEN 418
            +  +I++A +  Y+++++VG++E      N+R RDN    E  ++  +  +F +L++N
Sbjct: 400 PVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELEKN 458
>pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642 Back     alignment and structure
>pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine Length = 401 Back     alignment and structure
>pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate Length = 645 Back     alignment and structure
>pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix Length = 471 Back     alignment and structure
>pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix (Selenomethionine Derivative) Length = 471 Back     alignment and structure
>pdb|3IAL|A Chain A, Giardia Lamblia Prolyl-Trna Synthetase In Complex With Prolyl- Adenylate Length = 518 Back     alignment and structure
>pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With A Prolyl-Adenylate Analogue ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine) Length = 572 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
3uh0_A460 Threonyl-tRNA synthetase, mitochondrial; threonine 0.0
1evl_A401 Threonyl-tRNA synthetase; amino acid recognition, 0.0
1qf6_A642 THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m 0.0
1nyr_A645 Threonyl-tRNA synthetase 1; ATP, threonine, ligase 0.0
3a32_A471 Probable threonyl-tRNA synthetase 1; aeropyrum per 0.0
3dsq_A288 Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t 2e-67
2cja_A522 Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE 2e-50
3qtc_A290 Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet 3e-07
1nj1_A501 PROR, proline-tRNA synthetase, proline--tRNA ligas 8e-07
1v95_A130 Nuclear receptor coactivator 5; coactivator indepe 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 1e-04
2i4l_A458 Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud 1e-04
3mf2_A346 BLL0957 protein; aminoacyl-tRNA synthetase, seryl- 2e-04
1hc7_A477 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 4e-04
3lc0_A456 Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t 7e-04
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Length = 460 Back     alignment and structure
 Score =  693 bits (1790), Expect = 0.0
 Identities = 182/423 (43%), Positives = 260/423 (61%), Gaps = 33/423 (7%)

Query: 29  RKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYR-KRGFQEVVSPNVYNVKL 87
             + + Q+LF    LSPGS FF   GA I+N L+EF++ + + K GF EVV+P +Y   L
Sbjct: 38  SMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTL 97

Query: 88  WQTSGHWAHYSENMFSF---DVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGV 144
           W+ SGHW +Y+++MF     D E E Y LKPMNCPGHCLIF  + RS+ ELPLR +DF  
Sbjct: 98  WEKSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSP 157

Query: 145 LHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS-IFGFT----- 198
           LHRNE SGAL+GLTR+R+F QDD HIFCT  Q+  EI  +L  +  VY+ IF F      
Sbjct: 158 LHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSG 217

Query: 199 ----FNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITIT 254
               + +  STRP+ ++G+L+VWN AE+ L+  L   G+PW  NPGDGAFYGPK+DI +T
Sbjct: 218 AESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVT 277

Query: 255 DALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAG 314
           D L++ HQ ATIQLDFQLP RF+L + ++     RP+MIHRA  GS+ER +A+L +S  G
Sbjct: 278 DHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEG 337

Query: 315 KWPFWISPRQGIVIPVAEPFNEYADQVKN-----------------KIFAAGFMCDADLD 357
           +WPFW++P Q ++IPV     +  D                      +    F  D D  
Sbjct: 338 RWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLD-I 396

Query: 358 SSDTLNKKIRNAQISQYNFIMVVGEKEKSSNTVNVRTRDNIVHGE-FSVDDVITRFGKLK 416
            ++ +  +I++A +  Y+++++VG++E      N+R RDN    E  ++  +  +F +L+
Sbjct: 397 RNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELE 456

Query: 417 ENR 419
           +N 
Sbjct: 457 KNY 459
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Length = 401 Back     alignment and structure
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 Back     alignment and structure
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 Back     alignment and structure
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Length = 471 Back     alignment and structure
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288 Back     alignment and structure
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Length = 522 Back     alignment and structure
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* Length = 290 Back     alignment and structure
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Length = 501 Back     alignment and structure
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 Length = 130 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* Length = 458 Back     alignment and structure
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* Length = 346 Back     alignment and structure
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A Length = 477 Back     alignment and structure
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query426
3uh0_A460 Threonyl-tRNA synthetase, mitochondrial; threonine 100.0
1qf6_A642 THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m 100.0
1evl_A401 Threonyl-tRNA synthetase; amino acid recognition, 100.0
1nyr_A645 Threonyl-tRNA synthetase 1; ATP, threonine, ligase 100.0
3a32_A471 Probable threonyl-tRNA synthetase 1; aeropyrum per 100.0
1hc7_A477 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
4hvc_A519 Bifunctional glutamate/proline--tRNA ligase; ligas 100.0
3ial_A 518 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
1nj8_A459 Proline-tRNA synthetase, proline--tRNA ligase; cla 100.0
1nj1_A501 PROR, proline-tRNA synthetase, proline--tRNA ligas 100.0
2j3l_A572 Prolyl-tRNA synthetase; class II aminoacyl- T synt 100.0
2i4l_A458 Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud 100.0
4e51_A467 Histidine--tRNA ligase; seattle structural genomic 100.0
1h4v_B421 Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA 100.0
1qe0_A420 Histidyl-tRNA synthetase; class II tRNA synthetase 100.0
1htt_A423 Histidyl-tRNA synthetase; complex (tRNA synthetase 100.0
1ati_A505 Glycyl-tRNA synthetase; protein biosynthesis, liga 100.0
1wu7_A434 Histidyl-tRNA synthetase; ligase, structural genom 100.0
2zt5_A693 Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP 100.0
4g84_A464 Histidine--tRNA ligase, cytoplasmic; synthetase; 2 100.0
3net_A465 Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas 100.0
4g85_A517 Histidine-tRNA ligase, cytoplasmic; synthetase; 3. 100.0
3lc0_A456 Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t 100.0
1g5h_A454 Mitochondrial DNA polymerase accessory subunit; in 100.0
3ikl_A459 DNA polymerase subunit gamma-2, mitochondrial; tra 100.0
2dq3_A425 Seryl-tRNA synthetase; coiled-coil, homodimer, str 100.0
2dq0_A455 Seryl-tRNA synthetase; coiled-coil, homodimer, str 100.0
1ses_A421 Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A 100.0
3vbb_A522 Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l 100.0
1wle_A501 Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo 100.0
3lss_A484 Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
3od1_A400 ATP phosphoribosyltransferase regulatory subunit; 100.0
3qne_A485 Seryl-tRNA synthetase, cytoplasmic; amino acid bio 100.0
3err_A536 Fusion protein of microtubule binding domain from 100.0
2cja_A522 Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE 100.0
1z7m_A344 ATP phosphoribosyltransferase regulatory subunit; 99.97
3rac_A373 Histidine-tRNA ligase; structural genomics, PSI-bi 99.97
3mf2_A346 BLL0957 protein; aminoacyl-tRNA synthetase, seryl- 99.94
1usy_A275 ATP phosphoribosyltransferase regulatory subunit; 99.88
3dsq_A288 Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t 99.77
1v95_A130 Nuclear receptor coactivator 5; coactivator indepe 99.69
3qtc_A290 Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet 99.59
1nnh_A294 Asparaginyl-tRNA synthetase-related peptide; struc 99.28
1eov_A487 ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy 99.08
1wyd_A429 Hypothetical aspartyl-tRNA synthetase; archaea, LI 99.08
1x54_A434 Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe 99.03
1n9w_A422 Aspartyl-tRNA synthetase 2; biosynthetic protein; 98.95
3a74_A493 Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, 98.94
1e1o_A504 Lysyl-tRNA synthetase, heat inducible; ligase, ami 98.85
3a5y_A345 GENX, putative lysyl-tRNA synthetase; aminoacyl-tR 98.83
3nem_A438 Aspartyl-tRNA synthetase; rossmann fold, OB fold, 98.68
2xgt_A435 Asparaginyl-tRNA synthetase, cytoplasmic; ligase, 98.6
3l4g_A508 Phenylalanyl-tRNA synthetase alpha chain; aminoacy 98.56
3bju_A521 Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, 98.55
4ex5_A529 Lysine--tRNA ligase; structural genomics, niaid, n 98.5
1c0a_A585 Aspartyl tRNA synthetase; protein-RNA complex, lig 98.44
1l0w_A580 Aspartyl-tRNA synthetase; space-grown crystal, dim 98.43
3m4p_A456 Ehasnrs, asparaginyl-tRNA synthetase, putative; am 98.36
1b7y_A350 Phers, protein (phenylalanyl-tRNA synthetase); enz 98.33
3i7f_A548 Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi 98.31
4ah6_A 617 Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo 98.29
2du3_A534 O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l 98.27
2rhq_A294 Phenylalanyl-tRNA synthetase alpha chain; heterote 98.23
2du7_A549 O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l 97.91
2odr_B 648 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.76
2odr_A 665 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.75
2odr_D 685 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.74
2odr_C 701 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.74
3pco_A327 Phenylalanyl-tRNA synthetase, alpha subunit; amino 97.71
3l4g_B589 Phenylalanyl-tRNA synthetase beta chain; aminoacyl 97.55
3ig2_A213 Phenylalanyl-tRNA synthetase beta chain; phers, MC 97.52
3ica_A213 Phenylalanyl-tRNA synthetase beta chain; APC61692. 97.47
2rhq_B795 Phenylalanyl-tRNA synthetase beta chain; heterotet 97.35
1b7y_B785 Phers, protein (phenylalanyl-tRNA synthetase); enz 96.78
3cmq_A415 Phenylalanyl-tRNA synthetase, mitochondrial; class 96.74
3pco_B795 Phenylalanyl-tRNA synthetase, beta chain; aminoacy 94.29
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Back     alignment and structure
Probab=100.00  E-value=5.9e-79  Score=622.69  Aligned_cols=408  Identities=44%  Similarity=0.869  Sum_probs=375.6

Q ss_pred             cCCCCCCCCCCCCC-ChhHHHHHHhcCCcccccCCCcceeeccchHHHHHHHHHHHHHHH-HHcCCeEeecccccchhhH
Q psy10612         11 PECGDSNRMMPISF-VLWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEY-RKRGFQEVVSPNVYNVKLW   88 (426)
Q Consensus        11 ~~~~~~~~~~~~~~-~~~h~~l~~~~~l~~~~~~~~G~~~~lP~~~~~~~~i~~~i~~~~-~~~G~~~i~tP~l~~~~l~   88 (426)
                      .-|..-..+.++++ ..||++||++++||++.+.++|+++|+|.|+.++++|++++++.+ .++||++|.||+|++.++|
T Consensus        19 ~~~~~~~~~~~~~~~~rdH~~lg~~l~l~~~~~~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~   98 (460)
T 3uh0_A           19 SHMASATKNASSATPATMTSMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLW   98 (460)
T ss_dssp             -----------CCCHHHHHHHHHHHHTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHH
T ss_pred             ccccccCCCCCCCCCCCCHHHHHHhCCCceeccCCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHH
Confidence            34555556666666 569999999999999988899999999999999999999999999 9999999999999999999


Q ss_pred             hHhcccccccccceEeeeC---CceEEEcCCCcHHHHHHHhhhhcCcCCCCceeeeeccccccCCCCCCCCCccceeEeE
Q psy10612         89 QTSGHWAHYSENMFSFDVE---NETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQ  165 (426)
Q Consensus        89 ~~sg~~~~~~~e~y~~~d~---~~~~~LrP~~t~~i~~~~~~~~~~~~~lP~k~~~~g~~fR~E~~~~~~Gl~R~REF~q  165 (426)
                      .++|||+.|.++||.|+|+   ++.++||||+|+++++++++++.++++||+|+||+|+|||+|.++.++||.|+|||+|
T Consensus        99 ~~sGh~~~~~~emy~~~d~~~~~~~l~LrPt~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q  178 (460)
T 3uh0_A           99 EKSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQ  178 (460)
T ss_dssp             HHHTCTTTSGGGSCEECC------CEEECSCSHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEE
T ss_pred             HhcCCccccccceEEEecCCCCCceEEEcccCcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEE
Confidence            9999999999999999885   6899999999999999999999999999999999999999999985589999999999


Q ss_pred             cCeeEecCccchHHHHHHHHHHHHHHH-HHcCCe---------EEEEEecCCCccCCCchhHHHHHHHHHHhhccCCCCc
Q psy10612        166 DDAHIFCTVEQIGDEIVGALDFLRNVY-SIFGFT---------FNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPW  235 (426)
Q Consensus       166 ~d~~~fg~~~~~~~e~~~~~~~~~~il-~~lgi~---------~~i~~~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~  235 (426)
                      .|+|+||.++++++|+..+++++.++| +.|||+         +.+.++++|++++|+.+.|++++..|+++|+..+.++
T Consensus       179 ~d~~~f~~~e~~~~e~~~~i~~~~~~~~~~lGl~~~~~~~~~~~~~~l~t~pe~~~G~~~~w~~ae~~L~~~l~~~g~~~  258 (460)
T 3uh0_A          179 DDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPW  258 (460)
T ss_dssp             EEEEEEECGGGHHHHHHHHHHHHHHHHTTTSCCC-----CCSSCEEEEECCCSSCCSCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred             eeEEEEcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcccccccceEEEEccCCcccCCCHHHHHHHHHHHHHHHHHhCCCe
Confidence            999999998899999988889999999 999997         8899999999999999999999999999999999999


Q ss_pred             eeCCCCCccccCccceeeecccCCceeeeeeeeeecCCeEEeEEEeCCCCccccCEEEecccccchHHHHHHHHHhcCCC
Q psy10612        236 TENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAGK  315 (426)
Q Consensus       236 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~GgleRll~~l~e~~g~~  315 (426)
                      ..++++++||||++++.+.|++++.|+|+|+++||+++.+|+++|.+.+|....|++++++++||+||++++|+|++++.
T Consensus       259 ~~~~g~gafygpkid~~~~d~~gr~~q~~Tiqld~~~~~rf~l~y~~~~g~~~~P~~ih~~~~Gg~eRli~~Lie~~~g~  338 (460)
T 3uh0_A          259 KLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGR  338 (460)
T ss_dssp             EEETTCSCSSCCEEEEEEECTTSCEEEEEEEEEESHHHHHTTCCEECTTSCEECCEEEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred             eECCCccccccceEEEEEEccCCCeeeecccccccccccccceEEECCCCCccCcEEEecCcchHHHHHHHHHHHHcCCC
Confidence            99999999999999988889999999999999999999999999999988777899888888889999999999988889


Q ss_pred             CCCCCCCceEEEEeCCCC---hHHHHHHHHHHHHHC--------------CCeEEEcCCCCCCHHHHHHHHHHhCCcEEE
Q psy10612        316 WPFWISPRQGIVIPVAEP---FNEYADQVKNKIFAA--------------GFMCDADLDSSDTLNKKIRNAQISQYNFIM  378 (426)
Q Consensus       316 ~p~~~ap~~V~Vi~~~~~---~~~~a~~ia~~Lr~~--------------Gi~v~~d~~~~~~lgkk~~~A~~~gip~~i  378 (426)
                      ||+|++|+||+|+|++++   ..++|.+|++.||++              |++|++|+ ++.++|+||++|++.|+||+|
T Consensus       339 ~P~~laP~qv~Vipi~~~~~~~~~~a~~l~~~Lr~~~~~~~~~~~~~~~~Gi~v~~D~-~~~~lg~k~r~Ad~~g~p~~i  417 (460)
T 3uh0_A          339 WPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDI-RNEPVGYRIKSAILKNYSYLI  417 (460)
T ss_dssp             CCGGGCSCCEEEEESSTTCHHHHHHHHHHHHHHHCCCCTTSSCCCCTTCCCCCEEECC-CSSCHHHHHHHHHHHTCSEEE
T ss_pred             CCCCCCCceEEEEEecCCcHHHHHHHHHHHHHHHcCcccccccccccCCCCEEEEEEC-CCCCHHHHHHHHHHcCCCEEE
Confidence            999999999999999987   889999999999998              99999999 589999999999999999999


Q ss_pred             EEecCccCCCeEEEEEccCCe-eeeecHHHHHHHHHHHHhhc
Q psy10612        379 VVGEKEKSSNTVNVRTRDNIV-HGEFSVDDVITRFGKLKENR  419 (426)
Q Consensus       379 iiG~~E~~~~~v~vk~~~~~~-q~~v~~~el~~~i~~~~~~~  419 (426)
                      |||++|+++|+|+||+|++++ |..++++++++.|+++++++
T Consensus       418 vvG~~E~~~g~Vtvr~r~~~e~q~~v~~~el~~~l~~~~~~~  459 (460)
T 3uh0_A          418 IVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELEKNY  459 (460)
T ss_dssp             EECHHHHHHTCEEEEEGGGTTSCEEECHHHHHHHHHHHHHTT
T ss_pred             EEcchhhhCCeEEEEECCCCceeEEeeHHHHHHHHHHHHHhc
Confidence            999999999999999999999 99999999999999988764
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Back     alignment and structure
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Back     alignment and structure
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Back     alignment and structure
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Back     alignment and structure
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A Back     alignment and structure
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} Back     alignment and structure
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Back     alignment and structure
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Back     alignment and structure
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Back     alignment and structure
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* Back     alignment and structure
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* Back     alignment and structure
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} Back     alignment and structure
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A Back     alignment and structure
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 Back     alignment and structure
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* Back     alignment and structure
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* Back     alignment and structure
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Back     alignment and structure
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A Back     alignment and structure
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} Back     alignment and structure
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Back     alignment and structure
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} Back     alignment and structure
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Back     alignment and structure
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* Back     alignment and structure
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} Back     alignment and structure
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} Back     alignment and structure
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A Back     alignment and structure
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A Back     alignment and structure
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} Back     alignment and structure
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} Back     alignment and structure
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* Back     alignment and structure
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Back     alignment and structure
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A Back     alignment and structure
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A Back     alignment and structure
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Back     alignment and structure
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* Back     alignment and structure
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* Back     alignment and structure
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* Back     alignment and structure
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Back     alignment and structure
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 Back     alignment and structure
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* Back     alignment and structure
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* Back     alignment and structure
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* Back     alignment and structure
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} Back     alignment and structure
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A Back     alignment and structure
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* Back     alignment and structure
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* Back     alignment and structure
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A Back     alignment and structure
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* Back     alignment and structure
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Back     alignment and structure
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* Back     alignment and structure
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Back     alignment and structure
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} Back     alignment and structure
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} Back     alignment and structure
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* Back     alignment and structure
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A Back     alignment and structure
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A Back     alignment and structure
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* Back     alignment and structure
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} Back     alignment and structure
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} Back     alignment and structure
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* Back     alignment and structure
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* Back     alignment and structure
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} Back     alignment and structure
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} Back     alignment and structure
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Back     alignment and structure
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis} Back     alignment and structure
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis} Back     alignment and structure
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* Back     alignment and structure
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B* Back     alignment and structure
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A Back     alignment and structure
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 426
d1qf6a4291 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th 1e-103
d1nyra4291 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th 4e-85
d1g5ha2290 d.104.1.1 (A:41-330) The aaRS-like accessory subun 2e-38
d1b76a2331 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) 2e-36
d1nj8a3268 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) 2e-32
d1hc7a2272 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) 7e-28
d1nj1a3265 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS 7e-24
d1qf6a1110 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (Thr 8e-22
d1nyra1113 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (Thr 3e-18
d1g5ha1127 c.51.1.1 (A:343-469) The aaRS-like accessory subun 1e-14
d1qe0a195 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (His 6e-13
d1seta2311 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS 5e-12
d1nj1a1127 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS 2e-11
d1hc7a1127 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS 3e-11
d1h4vb196 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (His 3e-11
d1kmma199 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (His 3e-10
d1atia1111 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS 9e-10
d1nj8a1126 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS 9e-10
d1wu7a197 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (His 2e-08
d1z7ma1318 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase 3e-05
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Length = 291 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Threonyl-tRNA synthetase (ThrRS)
species: Escherichia coli [TaxId: 562]

 Score =  306 bits (785), Expect = e-103
 Identities = 144/287 (50%), Positives = 194/287 (67%), Gaps = 1/287 (0%)

Query: 29  RKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLW 88
           RKIG++ +L+   E +PG  F+   G  I+  L  F+RS+ ++  +QEV  P + +  LW
Sbjct: 4   RKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLW 63

Query: 89  QTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRN 148
           + +GHW +Y + MF+   EN  Y +KPMNCPGH  IF+  ++S+R+LPLRMA+FG  HRN
Sbjct: 64  EKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRN 123

Query: 149 ELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFT-FNLRLSTRP 207
           E SG+L GL RVR F QDDAHIFCT EQI DE+ G +  + ++YS FGF    ++LSTRP
Sbjct: 124 EPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRP 183

Query: 208 EKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQ 267
           EK +G  E+W++AE  L  +L     P+    G+GAFYGPKI+ T+ D L R  QC T+Q
Sbjct: 184 EKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQ 243

Query: 268 LDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYAG 314
           LDF LP R + +YV E  E+  PVMIHRAILGS+ER + ILTE +AG
Sbjct: 244 LDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAG 290
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Length = 291 Back     information, alignment and structure
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 290 Back     information, alignment and structure
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Length = 331 Back     information, alignment and structure
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 268 Back     information, alignment and structure
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Length = 272 Back     information, alignment and structure
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 265 Back     information, alignment and structure
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 113 Back     information, alignment and structure
>d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 Back     information, alignment and structure
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 95 Back     information, alignment and structure
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} Length = 311 Back     information, alignment and structure
>d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 127 Back     information, alignment and structure
>d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Length = 127 Back     information, alignment and structure
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 Back     information, alignment and structure
>d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 111 Back     information, alignment and structure
>d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 126 Back     information, alignment and structure
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 97 Back     information, alignment and structure
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Length = 318 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query426
d1qf6a4291 Threonyl-tRNA synthetase (ThrRS) {Escherichia coli 100.0
d1nyra4291 Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a 100.0
d1nj8a3268 Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc 100.0
d1nj1a3265 Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth 100.0
d1hc7a2272 Prolyl-tRNA synthetase (ProRS) {Thermus thermophil 100.0
d1b76a2331 Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil 100.0
d1seta2311 Seryl-tRNA synthetase (SerRS) {Thermus thermophilu 99.97
d1kmma2322 Histidyl-tRNA synthetase (HisRS) {Escherichia coli 99.94
d1wu7a2327 Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop 99.93
d1z7ma1318 ATP phosphoribosyltransferase regulatory subunit H 99.93
d1h4vb2324 Histidyl-tRNA synthetase (HisRS) {Thermus thermoph 99.93
d1qf6a1110 Threonyl-tRNA synthetase (ThrRS), C-terminal domai 99.92
d1qe0a2325 Histidyl-tRNA synthetase (HisRS) {Staphylococcus a 99.92
d1nyra1113 Threonyl-tRNA synthetase (ThrRS), C-terminal domai 99.92
d1nj1a1127 Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me 99.89
d1g5ha2290 The aaRS-like accessory subunit of mitochondrial p 99.87
d1nj8a1126 Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M 99.86
d1g5ha1127 The aaRS-like accessory subunit of mitochondrial p 99.85
d1hc7a1127 Prolyl-tRNA synthetase (ProRS) domain {Thermus the 99.85
d1atia2394 Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil 99.83
d1atia1111 Glycyl-tRNA synthetase (GlyRS), C-terminal domain 99.8
d1kmma199 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.8
d1wu7a197 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.8
d1usya_275 ATP phosphoribosyltransferase regulatory subunit H 99.78
d1qe0a195 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.78
d1h4vb196 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.77
d1c0aa3346 Aspartyl-tRNA synthetase (AspRS) {Escherichia coli 98.56
d1b8aa2335 Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ 98.55
d1e1oa2342 Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g 98.55
d1eova2353 Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S 98.51
d1nnha_293 Hypothetical protein PF1951 {Archaeon Pyrococcus f 98.42
d1l0wa3356 Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph 98.41
d1n9wa2304 Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph 98.07
d1jjca_266 Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS 98.01
d1v95a_130 Nuclear receptor coactivator 5 (KIAA1637) {Human ( 97.99
d1jjcb5207 Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, 97.04
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Threonyl-tRNA synthetase (ThrRS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-55  Score=419.12  Aligned_cols=288  Identities=50%  Similarity=0.921  Sum_probs=273.5

Q ss_pred             hhHHHHHHhcCCcccccCCCcceeeccchHHHHHHHHHHHHHHHHHcCCeEeecccccchhhHhHhcccccccccceEee
Q psy10612         26 LWNRKIGREQELFFFHELSPGSCFFQTKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFD  105 (426)
Q Consensus        26 ~~h~~l~~~~~l~~~~~~~~G~~~~lP~~~~~~~~i~~~i~~~~~~~G~~~i~tP~l~~~~l~~~sg~~~~~~~e~y~~~  105 (426)
                      .|||+||+++|||++++.++|++.|+|.|++++++|++++++++.+.||++|.||.|.+.++|.+||||+.|.++||.++
T Consensus         1 rDH~~lg~~l~lf~~~~~~~G~~~~lP~G~~l~~~L~~~i~e~~~~~G~~eV~~P~L~~~~l~~~sG~~~~~~~~~~~~~   80 (291)
T d1qf6a4           1 RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTS   80 (291)
T ss_dssp             TCHHHHHHHTTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEEEE
T ss_pred             CChHHHHHhCCCccccCCCCcceEEccCHHHHHHHHHHHHHHHHHHcCCEEEEcccccchhHHhhhchhhhccchhcccc
Confidence            48999999999999998999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCceEEEcCCCcHHHHHHHhhhhcCcCCCCceeeeeccccccCCCCCCCCCccceeEeEcCeeEecCccchHHHHHHHH
Q psy10612        106 VENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGAL  185 (426)
Q Consensus       106 d~~~~~~LrP~~t~~i~~~~~~~~~~~~~lP~k~~~~g~~fR~E~~~~~~Gl~R~REF~q~d~~~fg~~~~~~~e~~~~~  185 (426)
                      +.+++++|+||+|++++.++++++.||++||+|+||+++|||+|.++..+||.|+|||+|.|+|+|+.++++.+|+..++
T Consensus        81 ~~~~~~~L~Pt~e~~~~~~~~~~~~sy~~LPl~~~q~~~~fR~E~~~~~~Gl~R~reF~~~d~h~f~~~e~~~~e~~~~~  160 (291)
T d1qf6a4          81 SENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCI  160 (291)
T ss_dssp             ETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHH
T ss_pred             ccchhhcccccCcHHHHHHHHccccchhhcCeeEeecceeeecccccccccccccccceeccceeEecchhhHHHHHHHH
Confidence            98999999999999999999999999999999999999999999887678999999999999999999988888998999


Q ss_pred             HHHHHHHHHcCCe-EEEEEecCCCccCCCchhHHHHHHHHHHhhccCCCCceeCCCCCccccCccceeeecccCCceeee
Q psy10612        186 DFLRNVYSIFGFT-FNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCA  264 (426)
Q Consensus       186 ~~~~~il~~lgi~-~~i~~~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  264 (426)
                      +.+.++++.||++ +.+.+++++.++.|+.+.|++++..+...+...+.++....+.+++++|++++.+.+.+++.|+++
T Consensus       161 ~~~~~i~~~lGl~~~~v~~s~~~~~~~~~~e~w~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~k~~~~~~~~~gr~~~~~  240 (291)
T d1qf6a4         161 RLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCG  240 (291)
T ss_dssp             HHHHHHHGGGTCCCCEEEEECCCSSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEEEECTTCCEEEEE
T ss_pred             HHHHHHHHHcCCceEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHcCCCceecccccccccccccccccccCCCeEEec
Confidence            9999999999997 788889998889999999999999999999888888888888889999999988889999999999


Q ss_pred             eeeeeecCCeEEeEEEeCCCCccccCEEEecccccchHHHHHHHHHhcC
Q psy10612        265 TIQLDFQLPIRFNLAYVNEKGEKNRPVMIHRAILGSVERMVAILTESYA  313 (426)
Q Consensus       265 ~~~l~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~GgleRll~~l~e~~g  313 (426)
                      ++++||.++.+|+++|++.+|....|+++|++++||+||++++|+|+++
T Consensus       241 tiqld~~~~~rf~~~y~~~dg~~~~pvmiHra~~GsieR~ia~LiE~~~  289 (291)
T d1qf6a4         241 TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA  289 (291)
T ss_dssp             EEEEESSHHHHTTCCEECTTSCEECCEEEEEEEEEEHHHHHHHHHHHHT
T ss_pred             eeEEeccchhhhCCEEECCCCCCcCCEEEEcCCCCcHHHHHHHHHHhhC
Confidence            9999999999999999999998888999999999999999999999864
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Back     information, alignment and structure
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Back     information, alignment and structure
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} Back     information, alignment and structure
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Back     information, alignment and structure
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Back     information, alignment and structure
>d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} Back     information, alignment and structure
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Back     information, alignment and structure
>d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} Back     information, alignment and structure
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure