Psyllid ID: psy10730
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 150 | ||||||
| 307197497 | 714 | Low affinity cationic amino acid transpo | 0.673 | 0.141 | 0.693 | 5e-43 | |
| 332030638 | 713 | Low affinity cationic amino acid transpo | 0.68 | 0.143 | 0.686 | 3e-42 | |
| 193657417 | 149 | PREDICTED: hypothetical protein LOC10015 | 0.78 | 0.785 | 0.641 | 1e-41 | |
| 345481398 | 1220 | PREDICTED: hypothetical protein LOC10011 | 0.66 | 0.081 | 0.676 | 1e-38 | |
| 383847330 | 720 | PREDICTED: low affinity cationic amino a | 0.686 | 0.143 | 0.679 | 2e-37 | |
| 380018645 | 724 | PREDICTED: low affinity cationic amino a | 0.646 | 0.133 | 0.701 | 1e-36 | |
| 328791294 | 714 | PREDICTED: low affinity cationic amino a | 0.653 | 0.137 | 0.683 | 3e-36 | |
| 340720464 | 722 | PREDICTED: low affinity cationic amino a | 0.666 | 0.138 | 0.67 | 4e-36 | |
| 350412705 | 722 | PREDICTED: low affinity cationic amino a | 0.666 | 0.138 | 0.67 | 4e-36 | |
| 170052451 | 148 | conserved hypothetical protein [Culex qu | 0.773 | 0.783 | 0.606 | 2e-35 |
| >gi|307197497|gb|EFN78731.1| Low affinity cationic amino acid transporter 2 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 70/101 (69%), Positives = 82/101 (81%)
Query: 23 GKGLECYVCTNQEANTEKCLKTIKTCDQDEDACLSTINWGSPPYWSQGATKQYYVSKSCA 82
G LECYVCTNQE N +KCL TIKTC+QD+D C + I WGS PYWSQGA KQ+YVSK C+
Sbjct: 19 GHALECYVCTNQEGNQDKCLNTIKTCEQDQDVCYTEIKWGSTPYWSQGAKKQFYVSKKCS 78
Query: 83 SKKFCEEFKKKNMPSCTYIWYQDWKCSECCSGDRCNYFVTL 123
+KK CE ++ NMP CT+IWYQDWKCS+CC GDRCNY+V L
Sbjct: 79 TKKECERLQRNNMPDCTHIWYQDWKCSDCCQGDRCNYYVIL 119
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332030638|gb|EGI70326.1| Low affinity cationic amino acid transporter 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|193657417|ref|XP_001951621.1| PREDICTED: hypothetical protein LOC100158674 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|345481398|ref|XP_001603047.2| PREDICTED: hypothetical protein LOC100119236 [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|383847330|ref|XP_003699307.1| PREDICTED: low affinity cationic amino acid transporter 2-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|380018645|ref|XP_003693237.1| PREDICTED: low affinity cationic amino acid transporter 2-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|328791294|ref|XP_393753.3| PREDICTED: low affinity cationic amino acid transporter 2-like [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|340720464|ref|XP_003398657.1| PREDICTED: low affinity cationic amino acid transporter 2-like isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350412705|ref|XP_003489734.1| PREDICTED: low affinity cationic amino acid transporter 2-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|170052451|ref|XP_001862228.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167873383|gb|EDS36766.1| conserved hypothetical protein [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 150 | ||||||
| FB|FBgn0031268 | 153 | cold "coiled" [Drosophila mela | 0.686 | 0.673 | 0.615 | 4e-35 |
| FB|FBgn0031268 cold "coiled" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 64/104 (61%), Positives = 78/104 (75%)
Query: 25 GLECYVCTNQEANTEKCLKTIKTCDQDEDACLSTINWGSPPYWSQGATKQYYVSKSCASK 84
GLECYVC+NQ NTEKCL TIKTC+ E+ C + I WGS PY+S+GA KQYYVSK C +K
Sbjct: 25 GLECYVCSNQTGNTEKCLNTIKTCEPFENVCGTEIRWGSQPYFSEGALKQYYVSKRCMTK 84
Query: 85 KFCEEFKKKNMPS-CTYIWYQDWKCSECCSGDRCNYFVTLGGSS 127
+ C+ +K+ M CT+IWY+DW C+ECC GDRCNYFV G S
Sbjct: 85 EQCQSKRKRYMQLYCTHIWYEDWACNECCKGDRCNYFVISGAPS 128
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 150 150 0.00087 104 3 11 22 0.37 32
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 609 (65 KB)
Total size of DFA: 187 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.43u 0.07s 14.50t Elapsed: 00:00:06
Total cpu time: 14.43u 0.07s 14.50t Elapsed: 00:00:06
Start: Thu Aug 15 13:34:38 2013 End: Thu Aug 15 13:34:44 2013
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 150 | |||
| cd00117 | 79 | cd00117, LU, Ly-6 antigen / uPA receptor -like dom | 0.001 |
| >gnl|CDD|238065 cd00117, LU, Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor | Back alignment and domain information |
|---|
Score = 35.5 bits (82), Expect = 0.001
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 16/93 (17%)
Query: 26 LECYVCTNQEANTEKCLKTIKTCDQDEDACLSTINWGSPPYWSQGATKQYYVSKSCASKK 85
LECY CT +T C T C +D CL+ + + + + V + CAS
Sbjct: 1 LECYSCTGV--STSSC-STETNCPSPDDQCLTAVA-----TVIEESVRLSLVVRGCASD- 51
Query: 86 FCEEFKKKNMPSCTYIWYQDWKCSECCSGDRCN 118
C S T++ CC D CN
Sbjct: 52 -CPFTNVFGQLSITFLKVS------CCQEDLCN 77
|
Topology of these domains is similar to that of snake venom neurotoxins. Length = 79 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 150 | |||
| cd00117 | 79 | LU Ly-6 antigen / uPA receptor -like domain; occur | 99.22 | |
| PF00021 | 77 | UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor si | 99.02 | |
| smart00134 | 79 | LU Ly-6 antigen / uPA receptor -like domain. Three | 98.95 | |
| cd00206 | 64 | snake_toxin Snake toxin domain, present in short a | 98.47 | |
| PF00087 | 63 | Toxin_1: Snake toxin; InterPro: IPR003571 Snake to | 98.23 | |
| PF02988 | 83 | PLA2_inh: Phospholipase A2 inhibitor; InterPro: IP | 97.91 | |
| PF01064 | 83 | Activin_recp: Activin types I and II receptor doma | 96.23 | |
| KOG2052|consensus | 513 | 89.03 | ||
| PF06211 | 107 | BAMBI: BMP and activin membrane-bound inhibitor (B | 89.03 | |
| PF05444 | 152 | DUF753: Protein of unknown function (DUF753); Inte | 83.34 |
| >cd00117 LU Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.9e-12 Score=84.79 Aligned_cols=75 Identities=32% Similarity=0.619 Sum_probs=56.8
Q ss_pred eEEeecCCCCCCHHHHhcccccccCCCCeeEeeecCCCCCeeccC--CceeeEEecccCCchhchHhhhccCCCcceeec
Q psy10730 26 LECYVCTNQEANTEKCLKTIKTCDQDEDACLSTINWGSPPYWSQG--ATKQYYVSKSCASKKFCEEFKKKNMPSCTYIWY 103 (150)
Q Consensus 26 LeCYvC~~q~~N~ekCLntiktC~~~ed~ClT~I~wgs~py~s~G--a~kQ~yVSK~Ca~k~~C~~~~~~~m~~ct~iwy 103 (150)
|+||+|.++ |.+.|++ .++|++++|+|++. ++... ..+...+.|+|+. .|+......++.-.++
T Consensus 1 L~C~~C~~~--~~~~C~~-~~~C~~~~~~C~~~-------~~~~~~~~~~~~~~~rgC~~--~C~~~~~~~~~~~~~~-- 66 (79)
T cd00117 1 LECYSCTGV--STSSCST-ETNCPSPDDQCLTA-------VATVIEESVRLSLVVRGCAS--DCPFTNVFGQLSITFL-- 66 (79)
T ss_pred CccCcCCCC--CCCCCCC-CCccCCCCCEeeEE-------EEEEEeeccccceEECcccC--CCCCCCccCccccceE--
Confidence 789999998 3468998 66999999999986 33322 2245579999999 5998877655322232
Q ss_pred ccccccCCCCCCCCC
Q psy10730 104 QDWKCSECCSGDRCN 118 (150)
Q Consensus 104 ~dw~c~eCC~gD~CN 118 (150)
.+.||++|+||
T Consensus 67 ----~~~CC~tD~CN 77 (79)
T cd00117 67 ----KVSCCQEDLCN 77 (79)
T ss_pred ----eeeeCCCCccC
Confidence 58999999999
|
Topology of these domains is similar to that of snake venom neurotoxins. |
| >PF00021 UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor similarity | Back alignment and domain information |
|---|
| >smart00134 LU Ly-6 antigen / uPA receptor -like domain | Back alignment and domain information |
|---|
| >cd00206 snake_toxin Snake toxin domain, present in short and long neurotoxins, cytotoxins and short toxins, and in other miscellaneous venom peptides | Back alignment and domain information |
|---|
| >PF00087 Toxin_1: Snake toxin; InterPro: IPR003571 Snake toxins belong to a family of proteins [] which groups short and long neurotoxins, cytotoxins and short toxins, as well as a other miscellaneous venom peptides | Back alignment and domain information |
|---|
| >PF02988 PLA2_inh: Phospholipase A2 inhibitor; InterPro: IPR004126 Proteins in this entry inhibit basic phospholipase A2 isozymes in snake's venom [, ] | Back alignment and domain information |
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| >PF01064 Activin_recp: Activin types I and II receptor domain; InterPro: IPR000472 Transforming growth factor-beta (TGF-beta) forms a family with other growth factors described in PDOC00223 from PROSITEDOC | Back alignment and domain information |
|---|
| >KOG2052|consensus | Back alignment and domain information |
|---|
| >PF06211 BAMBI: BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain; InterPro: IPR009345 This family consists of several eukaryotic BMP and activin membrane-bound inhibitor (BAMBI) proteins | Back alignment and domain information |
|---|
| >PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 150 | |||
| 2l03_A | 74 | LY-6/neurotoxin-like protein 1; LYNX1, acetylcholi | 99.15 | |
| 2j8b_A | 79 | CD59 glycoprotein; lipid-binding protein, lipid-bi | 99.14 | |
| 2h5f_A | 77 | Denmotoxin; three-finger toxin, neurotoxin, snake | 99.07 | |
| 2h7z_B | 77 | Irditoxin subunit B; three-finger toxin, neurotoxi | 99.02 | |
| 3neq_A | 66 | Muscarinic M1-toxin1, muscarinic toxin 1; chimeric | 98.91 | |
| 1mr6_A | 68 | Neurotoxin; venom; NMR {Bungarus multicinctus} SCO | 98.77 | |
| 1ywh_A | 313 | Urokinase plasminogen activator surface receptor; | 98.73 | |
| 1cvo_A | 62 | Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g. | 98.7 | |
| 1hc9_A | 74 | Alpha-bungarotoxin; toxin/peptide, complex (toxin/ | 98.68 | |
| 2h7z_A | 75 | Irditoxin subunit A; three-finger toxin, neurotoxi | 98.68 | |
| 1ff4_A | 65 | Muscarinic toxin/acetylcholine receptor binding P; | 98.65 | |
| 1vyc_A | 65 | Bucain, neurotoxin; snake neurotoxin; NMR {Bungaru | 98.61 | |
| 2jqp_A | 65 | WEAK toxin 1; protein; NMR {Bungarus candidus} | 98.61 | |
| 1kba_A | 66 | Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} | 98.6 | |
| 1lsi_A | 66 | LSIII; venom, multigene family, neurotoxin; NMR {L | 98.58 | |
| 1ntn_A | 72 | Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja | 98.56 | |
| 1jgk_A | 66 | Candoxin; beta sheet, snake venom protein, toxin; | 98.49 | |
| 3plc_A | 63 | Beta-cardiotoxin OH-27; beta-sheet, novel cardioto | 98.45 | |
| 1ywh_A | 313 | Urokinase plasminogen activator surface receptor; | 98.41 | |
| 1f94_A | 63 | Bucandin; three-finger snake presynaptic neurotoxi | 98.28 | |
| 2fd6_U | 276 | Urokinase plasminogen activator surface receptor; | 98.26 | |
| 1ug4_A | 60 | Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A { | 98.25 | |
| 3hh7_A | 65 | Muscarinic toxin-like protein 3 homolog; haditoxin | 98.11 | |
| 4aea_A | 71 | Long neurotoxin 1; three-finger toxin, nicotinic a | 98.08 | |
| 3era_A | 62 | Erabutoxin A; snake neurotoxin, venom, postsynapti | 98.04 | |
| 3laq_U | 277 | UPAR, U-PAR, urokinase plasminogen activator surfa | 98.04 | |
| 3laq_U | 277 | UPAR, U-PAR, urokinase plasminogen activator surfa | 97.95 | |
| 1vb0_A | 61 | Cobrotoxin B; short-chain neurotoxin, three-finger | 97.88 | |
| 1ntx_A | 60 | Alpha-neurotoxin; NMR {Dendroaspis polylepis polyl | 97.65 | |
| 3vts_A | 61 | Cytotoxin 1; three finger toxin, venom toxin; 2.43 | 97.49 | |
| 1tfs_A | 60 | Toxin FS2; NMR {Dendroaspis polylepis polylepis} S | 97.47 | |
| 1drs_A | 59 | Dendroaspin; cell adhesion protein; NMR {Dendroasp | 97.24 | |
| 2pjy_C | 79 | TGF-beta receptor type-1; ternary complex, three f | 97.1 | |
| 1fas_A | 61 | Fasciculin 1; toxin; 1.80A {Dendroaspis angusticep | 97.07 | |
| 2l5s_A | 88 | TGF-beta receptor type-1; ALK5, transforming growt | 96.96 | |
| 2fd6_U | 276 | Urokinase plasminogen activator surface receptor; | 96.86 | |
| 2h62_C | 129 | Bone morphogenetic protein receptor type IA; TGF-b | 96.61 | |
| 4fao_C | 106 | Serine/threonine-protein kinase receptor R3; TGF-b | 96.1 | |
| 3evs_C | 119 | Bone morphogenetic protein receptor type-1B; ligan | 95.66 | |
| 2jve_A | 91 | PROD1; LY-6, three-finger snake toxin, UPAR, CD59, | 88.32 |
| >2l03_A LY-6/neurotoxin-like protein 1; LYNX1, acetylcholine receptor, endogenic neuromodulator, Thr toxins, signaling protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=7.4e-12 Score=83.62 Aligned_cols=73 Identities=27% Similarity=0.544 Sum_probs=55.3
Q ss_pred eeEEeecCCCCCCHHHHhcccccccCCCCeeEeeecCCCCCeeccCCceeeEEecccCCchhchHhhhccCCCcceeecc
Q psy10730 25 GLECYVCTNQEANTEKCLKTIKTCDQDEDACLSTINWGSPPYWSQGATKQYYVSKSCASKKFCEEFKKKNMPSCTYIWYQ 104 (150)
Q Consensus 25 aLeCYvC~~q~~N~ekCLntiktC~~~ed~ClT~I~wgs~py~s~Ga~kQ~yVSK~Ca~k~~C~~~~~~~m~~ct~iwy~ 104 (150)
.|+||+|.. ++ ..|.+ +++|++++++|.|. +|.. +.....|+|+|+.. |++......+. +++
T Consensus 1 ~L~C~~C~~--~~-~~c~~-~~~C~~~~~~C~t~-------~~~~-~~~~~~v~rgC~~~--Cp~~~~~~~~~-~~~--- 62 (74)
T 2l03_A 1 MLDCHVCAY--NG-DNCFN-PMRCPAMVAYCMTT-------RTYY-TPTRMKVSKSCVPR--CFETVYDGYSK-HAS--- 62 (74)
T ss_dssp CCEEECEEE--SS-SCCCC-EEECCTTCCEEEEE-------EEEE-ETTEEEEEEEEESC--CCCCCCCSSSC-CSE---
T ss_pred CCEeeECCC--CC-CcCCC-CeEcCCCCCEEEEE-------EEEc-cCCCceEeccccCc--CcCCccccccc-cce---
Confidence 489999997 32 47887 99999999999997 5542 23345799999974 99877633333 222
Q ss_pred cccccCCCCCCCCC
Q psy10730 105 DWKCSECCSGDRCN 118 (150)
Q Consensus 105 dw~c~eCC~gD~CN 118 (150)
-+.||++|+||
T Consensus 63 ---~v~CC~tDlCN 73 (74)
T 2l03_A 63 ---TTSCCQYDLCN 73 (74)
T ss_dssp ---EEEEECSTTTT
T ss_pred ---EeEeCCCCCCC
Confidence 58999999999
|
| >2j8b_A CD59 glycoprotein; lipid-binding protein, lipid-binding protein MAC, membrane, GPI-anchor, complement, lipoprotein; 1.15A {Homo sapiens} SCOP: g.7.1.3 PDB: 2ux2_A 2uwr_A 1cdq_A 1cdr_A* 1cds_A* 2ofs_A 1erg_A 1erh_A | Back alignment and structure |
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| >2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1 | Back alignment and structure |
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| >2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1 | Back alignment and structure |
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| >3neq_A Muscarinic M1-toxin1, muscarinic toxin 1; chimeric muscarinic toxin, HM1-muscarinic receptor, snake to green mamba; 1.25A {Dendroaspis angusticeps} PDB: 2vlw_A* 3fev_A 4do8_A | Back alignment and structure |
|---|
| >1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1 | Back alignment and structure |
|---|
| >1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 | Back alignment and structure |
|---|
| >1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A | Back alignment and structure |
|---|
| >1hc9_A Alpha-bungarotoxin; toxin/peptide, complex (toxin/peptide), acetylcholine receptor mimitope, alpha-bungarotoxin, 3- finger; 1.8A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2qc1_A* 1abt_A 1bxp_A 1haa_A 1haj_A 1hc9_B 1hoy_A 1idg_A 1idh_A 1idi_A 1idl_A 1ik8_A 1ikc_A 1jbd_A 1kc4_A 1kfh_A 1kl8_A 1l4w_A 1ljz_A 1rgj_A ... | Back alignment and structure |
|---|
| >2h7z_A Irditoxin subunit A; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1 | Back alignment and structure |
|---|
| >1ff4_A Muscarinic toxin/acetylcholine receptor binding P; three fingers motif; 1.50A {Dendroaspis angusticeps} SCOP: g.7.1.1 | Back alignment and structure |
|---|
| >1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A | Back alignment and structure |
|---|
| >2jqp_A WEAK toxin 1; protein; NMR {Bungarus candidus} | Back alignment and structure |
|---|
| >1kba_A Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2nbt_A | Back alignment and structure |
|---|
| >1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1 | Back alignment and structure |
|---|
| >1ntn_A Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja oxiana} SCOP: g.7.1.1 PDB: 1w6b_A | Back alignment and structure |
|---|
| >1jgk_A Candoxin; beta sheet, snake venom protein, toxin; NMR {Bungarus candidus} SCOP: g.7.1.1 | Back alignment and structure |
|---|
| >3plc_A Beta-cardiotoxin OH-27; beta-sheet, novel cardiotoxin; 2.41A {Ophiophagus hannah} SCOP: g.7.1.1 | Back alignment and structure |
|---|
| >1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 | Back alignment and structure |
|---|
| >1f94_A Bucandin; three-finger snake presynaptic neurotoxin; 0.97A {Bungarus candidus} SCOP: g.7.1.1 PDB: 1ijc_A | Back alignment and structure |
|---|
| >2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U* | Back alignment and structure |
|---|
| >1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ... | Back alignment and structure |
|---|
| >3hh7_A Muscarinic toxin-like protein 3 homolog; haditoxin, three finger toxin, snake venom, neurotoxin, nicotinic acetylcholine receptors; 1.55A {Ophiophagus hannah} SCOP: g.7.1.0 | Back alignment and structure |
|---|
| >4aea_A Long neurotoxin 1; three-finger toxin, nicotinic acetylcholine receptor; 1.94A {Naja kaouthia} SCOP: g.7.1.1 PDB: 1lxg_A 1lxh_A 1yi5_F 1ctx_A 2ctx_A 1txa_A 1txb_A | Back alignment and structure |
|---|
| >3era_A Erabutoxin A; snake neurotoxin, venom, postsynaptic neurotoxin; 1.70A {Laticauda semifasciata} SCOP: g.7.1.1 PDB: 2era_A | Back alignment and structure |
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| >3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus} | Back alignment and structure |
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| >3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus} | Back alignment and structure |
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| >1vb0_A Cobrotoxin B; short-chain neurotoxin, three-finger toxin; HET: SO4; 0.92A {Naja atra} SCOP: g.7.1.1 PDB: 1onj_A* 1je9_A 1nor_A 1iq9_A 1nea_A 3nds_A 1cod_A 1coe_A 1v6p_A 1g6m_A 1qkd_A 1qke_A 5ebx_A 1era_A 1fra_A 3ebx_A 6ebx_A 1nxb_A | Back alignment and structure |
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| >1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1 | Back alignment and structure |
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| >3vts_A Cytotoxin 1; three finger toxin, venom toxin; 2.43A {Hemachatus haemachatus} | Back alignment and structure |
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| >1tfs_A Toxin FS2; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1 | Back alignment and structure |
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| >1drs_A Dendroaspin; cell adhesion protein; NMR {Dendroaspis jamesoni kaimosae} SCOP: g.7.1.2 PDB: 2la1_A | Back alignment and structure |
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| >2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I | Back alignment and structure |
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| >1fas_A Fasciculin 1; toxin; 1.80A {Dendroaspis angusticeps} SCOP: g.7.1.1 PDB: 1fsc_A 1f8u_B* 1b41_B 1fss_B* 1ku6_B* 1mah_F* 2x8b_B* 1qm7_A | Back alignment and structure |
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| >2l5s_A TGF-beta receptor type-1; ALK5, transforming growth factor beta, type I receptor, SIGN protein; NMR {Homo sapiens} | Back alignment and structure |
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| >2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U* | Back alignment and structure |
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| >2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B | Back alignment and structure |
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| >4fao_C Serine/threonine-protein kinase receptor R3; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens} PDB: 2lcr_A | Back alignment and structure |
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| >3evs_C Bone morphogenetic protein receptor type-1B; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Mus musculus} | Back alignment and structure |
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| >2jve_A PROD1; LY-6, three-finger snake toxin, UPAR, CD59, LIMB regeneration; NMR {Notophthalmus viridescens} | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 150 | |||
| d2j8ba1 | 77 | CD59 {Human (Homo sapiens) [TaxId: 9606]} | 98.14 | |
| d1mr6a_ | 68 | Bungarotoxin {Many-banded krait (Bungarus multicin | 97.97 | |
| d1jgka_ | 66 | Candoxin {Malayan krait (Bungarus candidus) [TaxId | 97.83 | |
| d1ff4a_ | 65 | Muscarinic toxin {Green mamba (Dendroaspis angusti | 97.82 | |
| d1ntna_ | 72 | Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 865 | 97.7 | |
| d1kxia_ | 62 | Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxI | 97.41 | |
| d2h8ua1 | 65 | Bucain {Malaysian krait (Bungarus candidus) [TaxId | 97.41 | |
| d1v6pa_ | 62 | Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra) | 97.39 | |
| d1hc9a_ | 74 | Bungarotoxin {Many-banded krait (Bungarus multicin | 97.33 | |
| d3ebxa_ | 62 | Erabutoxin B (also neurotoxin B) {Sea snake (Latic | 97.16 | |
| d2h7zb1 | 77 | Irditoxin subunit B {Brown tree snake (Boiga irreg | 97.14 | |
| d2h5fa1 | 75 | Denmotoxin {Mangrove snake (Boiga dendrophila) [Ta | 97.07 | |
| d1lsia_ | 66 | Long neurotoxin 1 (component LSIII) {Sea snake (La | 97.04 | |
| d1tgxa_ | 60 | gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId | 96.83 | |
| d1kbaa_ | 66 | Bungarotoxin {Many-banded krait (Bungarus multicin | 96.53 | |
| d2fd6u2 | 87 | Urokinase plasminogen activator surface receptor, | 96.0 | |
| d1ntxa_ | 60 | alpha-Toxin {Black mamba (Dendroaspis polylepis po | 95.98 | |
| d2h62c1 | 84 | BMP receptor Ia ectodomain {Human (Homo sapiens) [ | 95.63 | |
| d2ctxa_ | 71 | alpha-Cobratoxin {Cobra (Naja siamensis) [TaxId: 8 | 95.48 | |
| d1drsa_ | 59 | Dendroaspin {Dendroaspis jamesoni kaimosae [TaxId: | 95.17 | |
| d2h7za1 | 75 | Irditoxin subunit A {Brown tree snake (Boiga irreg | 94.74 | |
| d1tfsa_ | 60 | FS2 toxin {Black mamba (Dendroaspis polylepis poly | 93.35 | |
| d1fasa_ | 61 | Fasciculin {Green mamba (Dendroaspis angusticeps) | 92.26 |
| >d2j8ba1 g.7.1.3 (A:1-77) CD59 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Snake toxin-like superfamily: Snake toxin-like family: Extracellular domain of cell surface receptors domain: CD59 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=3.2e-07 Score=63.83 Aligned_cols=74 Identities=31% Similarity=0.515 Sum_probs=53.5
Q ss_pred eEEeecCCCCCCHHHHhcccccccCCCCeeEeeecCCCCCeeccCCceeeEEecccCCchhchHhhhccCCCcceeeccc
Q psy10730 26 LECYVCTNQEANTEKCLKTIKTCDQDEDACLSTINWGSPPYWSQGATKQYYVSKSCASKKFCEEFKKKNMPSCTYIWYQD 105 (150)
Q Consensus 26 LeCYvC~~q~~N~ekCLntiktC~~~ed~ClT~I~wgs~py~s~Ga~kQ~yVSK~Ca~k~~C~~~~~~~m~~ct~iwy~d 105 (150)
|+||.|.+.++ .|-+ .++|..++|.||..- +.+ -+.-+|-..+.|.-.+...|=.-..+
T Consensus 1 L~CY~C~d~t~---~C~t-~~~C~~~~DaCL~~~-----------~g~--~~y~qCwk~sDC~~~~is~~f~~~~f---- 59 (77)
T d2j8ba1 1 LQCYNCPNPTA---DCKT-AVNCSSDFDACLITK-----------AGL--QVYNKCWKFEHCNFNDVTTRLRENEL---- 59 (77)
T ss_dssp CEEECCSSCCT---TCCC-EEECCTTCCEEEEEE-----------ETT--EEEEEEECGGGCSHHHHHHHHTCSSC----
T ss_pred CcccccCCCCC---cccc-ccccCCCCCeeEEEe-----------eCC--eEEeeeEeccCCCHHHHHHHhcccCc----
Confidence 78999999887 4766 899999999999752 122 24457888889986666532221221
Q ss_pred ccccCCCCCCCCCceeeccC
Q psy10730 106 WKCSECCSGDRCNYFVTLGG 125 (150)
Q Consensus 106 w~c~eCC~gD~CNy~visGa 125 (150)
-..||+.|||| .+++
T Consensus 60 --~y~CC~~dLCN---~~~~ 74 (77)
T d2j8ba1 60 --TYYCCKKDLCN---FNEQ 74 (77)
T ss_dssp --EEEEECSTTCC---CGGG
T ss_pred --eeeccCccccC---chhh
Confidence 45899999999 6664
|
| >d1mr6a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), gamma-bungarotoxin [TaxId: 8616]} | Back information, alignment and structure |
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| >d1jgka_ g.7.1.1 (A:) Candoxin {Malayan krait (Bungarus candidus) [TaxId: 92438]} | Back information, alignment and structure |
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| >d1ff4a_ g.7.1.1 (A:) Muscarinic toxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} | Back information, alignment and structure |
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| >d1ntna_ g.7.1.1 (A:) Neurotoxin I {Snake (Naja naja oxiana) [TaxId: 8657]} | Back information, alignment and structure |
|---|
| >d1kxia_ g.7.1.1 (A:) Cardiotoxin V {Taiwan cobra (Naja naja atra) [TaxId: 8656]} | Back information, alignment and structure |
|---|
| >d2h8ua1 g.7.1.1 (A:1-65) Bucain {Malaysian krait (Bungarus candidus) [TaxId: 92438]} | Back information, alignment and structure |
|---|
| >d1v6pa_ g.7.1.1 (A:) Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra) [TaxId: 8656]} | Back information, alignment and structure |
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| >d1hc9a_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), Alpha-bungarotoxin [TaxId: 8616]} | Back information, alignment and structure |
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| >d3ebxa_ g.7.1.1 (A:) Erabutoxin B (also neurotoxin B) {Sea snake (Laticauda semifasciata) [TaxId: 8631]} | Back information, alignment and structure |
|---|
| >d2h7zb1 g.7.1.1 (B:1-77) Irditoxin subunit B {Brown tree snake (Boiga irregularis) [TaxId: 92519]} | Back information, alignment and structure |
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| >d2h5fa1 g.7.1.1 (A:3-77) Denmotoxin {Mangrove snake (Boiga dendrophila) [TaxId: 46286]} | Back information, alignment and structure |
|---|
| >d1lsia_ g.7.1.1 (A:) Long neurotoxin 1 (component LSIII) {Sea snake (Laticauda semifasciata) [TaxId: 8631]} | Back information, alignment and structure |
|---|
| >d1tgxa_ g.7.1.1 (A:) gamma-Cardiotoxin {Snake (Naja nigricollis) [TaxId: 8654]} | Back information, alignment and structure |
|---|
| >d1kbaa_ g.7.1.1 (A:) Bungarotoxin {Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin [TaxId: 8616]} | Back information, alignment and structure |
|---|
| >d2fd6u2 g.7.1.3 (U:189-275) Urokinase plasminogen activator surface receptor, UPAR {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ntxa_ g.7.1.1 (A:) alpha-Toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]} | Back information, alignment and structure |
|---|
| >d2h62c1 g.7.1.3 (C:34-117) BMP receptor Ia ectodomain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ctxa_ g.7.1.1 (A:) alpha-Cobratoxin {Cobra (Naja siamensis) [TaxId: 84476]} | Back information, alignment and structure |
|---|
| >d1drsa_ g.7.1.2 (A:) Dendroaspin {Dendroaspis jamesoni kaimosae [TaxId: 8619]} | Back information, alignment and structure |
|---|
| >d2h7za1 g.7.1.1 (A:1-75) Irditoxin subunit A {Brown tree snake (Boiga irregularis) [TaxId: 92519]} | Back information, alignment and structure |
|---|
| >d1tfsa_ g.7.1.1 (A:) FS2 toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]} | Back information, alignment and structure |
|---|
| >d1fasa_ g.7.1.1 (A:) Fasciculin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]} | Back information, alignment and structure |
|---|