Psyllid ID: psy10762

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
Protein Sequence
MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLPPK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mwhtgetphrcdycaktftrkEHLVNHVrqhtgesphhcnycaksftrkdhmvyherqhtgetpfpcqycpkaftrkdhLVNHvrrhtgesphkctycmksftrkehltNHIRQHTvrrvndlppk
Flexible Loop (DISEMBL)
mwhtgetphrcdycAKTFTRKEHLVNHvrqhtgesphhcnYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNhvrrhtgesphkctyCMKSFTRKehltnhirqhtvrrvndlppk
Low Complexity Region (SEG)
MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLPPK
Disordered region (IsUnstruct)
*********RCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI**************
Disordered Region (DISOPRED)
MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLPP*
Disordered Region (DISEMBL)
********HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLPPK
Disordered Region (DISPRO)
MW**GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLPPK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	126	2.2.26 [Sep-21-2011]
P51523	738	Zinc finger protein 84 OS	yes	N/A	0.920	0.157	0.521	2e-31
Q96RE9	604	Zinc finger protein 300 O	no	N/A	0.904	0.188	0.5	3e-29
Q5R5Y7	470	Zinc finger protein 436 O	no	N/A	0.904	0.242	0.491	4e-29
Q9C0F3	470	Zinc finger protein 436 O	no	N/A	0.928	0.248	0.478	5e-29
Q15776	578	Zinc finger protein 192 O	no	N/A	0.960	0.209	0.446	6e-29
A2T736	578	Zinc finger protein 192 O	no	N/A	0.960	0.209	0.446	6e-29
A1YG60	578	Zinc finger protein 192 O	N/A	N/A	0.960	0.209	0.446	6e-29
Q8BPP0	452	Zinc finger protein 436 O	no	N/A	0.928	0.258	0.478	7e-29
P10076	861	Zinc finger protein 26 OS	no	N/A	0.928	0.135	0.478	2e-28
Q9Y6Q3	630	Zinc finger protein 37 ho	no	N/A	0.904	0.180	0.482	3e-28

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 80/117 (68%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P+ C+ C K F  K  L+NH R HTGE P  C+ C K+F+RK H++ H+R HTGE
Sbjct: 621 HTGEKPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGE 680

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
            P+ C  C KAF++K  LVNH R HTGE P++C  C K+F++K  L NH R HTV++
Sbjct: 681 KPYGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKK 737

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q96RE9|ZN300_HUMAN Zinc finger protein 300 OS=Homo sapiens GN=ZNF300 PE=2 SV=1

 Score =  126 bits (317), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 75/114 (65%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++C  C + F+RK  L+ H   HTGE P+ C  C K+F+RK  ++ H+R HTGE
Sbjct: 431 HTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGE 490

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P+ C  C KAF +K HL+ H R HTGE P+ CT C K+F++K HL  H R HT
Sbjct: 491 KPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHT 544

Has a transcriptional repressor activity.

Homo sapiens (taxid: 9606)

>sp|Q5R5Y7|ZN436_PONAB Zinc finger protein 436 OS=Pongo abelii GN=ZNF436 PE=2 SV=1

 Score =  126 bits (317), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 75/114 (65%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++CD C K F++   LV H R HTGE P+HCN C ++F+R  H+V H+R HTGE
Sbjct: 300 HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGE 359

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P+ C  C K+F+R  HL+ H + HTGE P++C  C +SF  +  L  H R HT
Sbjct: 360 KPYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHT 413

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q9C0F3|ZN436_HUMAN Zinc finger protein 436 OS=Homo sapiens GN=ZNF436 PE=2 SV=2

 Score =  126 bits (316), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 76/117 (64%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++CD C K F++   LV H R HTGE P+HCN C ++F+R  H+V H+R HTGE
Sbjct: 300 HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGE 359

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
            P+ C  C K+F+R  HL+ H + HTGE P++C  C +SF  +  L  H R HT  +
Sbjct: 360 KPYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEK 416

May be a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q15776|ZN192_HUMAN Zinc finger protein 192 OS=Homo sapiens GN=ZNF192 PE=1 SV=2

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 76/121 (62%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P+ CD C KTF R  HL+ H R HTGE P+ CN C ++F++K  ++ H+R HTGE
Sbjct: 456 HTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGE 515

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVND 122
            P+ C+ C KAF     L+ H+R HTGE P++C  C K+F ++  L  H R H+  +   
Sbjct: 516 RPYKCKECGKAFNGNTGLIQHLRIHTGEKPYQCNECGKAFIQRSSLIRHQRIHSGEKSES 575

Query: 123 L 123
           +
Sbjct: 576 I 576

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A2T736|ZN192_PANTR Zinc finger protein 192 OS=Pan troglodytes GN=ZNF192 PE=3 SV=1

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 76/121 (62%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P+ CD C KTF R  HL+ H R HTGE P+ CN C ++F++K  ++ H+R HTGE
Sbjct: 456 HTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGE 515

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVND 122
            P+ C+ C KAF     L+ H+R HTGE P++C  C K+F ++  L  H R H+  +   
Sbjct: 516 RPYKCKECGKAFNGNTGLIQHLRIHTGEKPYQCNECGKAFIQRSSLIRHQRIHSGEKSES 575

Query: 123 L 123
           +
Sbjct: 576 I 576

May be involved in transcriptional regulation.

Pan troglodytes (taxid: 9598)

>sp|A1YG60|ZN192_PANPA Zinc finger protein 192 OS=Pan paniscus GN=ZNF192 PE=3 SV=1

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 76/121 (62%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P+ CD C KTF R  HL+ H R HTGE P+ CN C ++F++K  ++ H+R HTGE
Sbjct: 456 HTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGE 515

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVND 122
            P+ C+ C KAF     L+ H+R HTGE P++C  C K+F ++  L  H R H+  +   
Sbjct: 516 RPYKCKECGKAFNGNTGLIQHLRIHTGEKPYQCNECGKAFIQRSSLIRHQRIHSGEKSES 575

Query: 123 L 123
           +
Sbjct: 576 I 576

May be involved in transcriptional regulation.

Pan paniscus (taxid: 9597)

>sp|Q8BPP0|ZN436_MOUSE Zinc finger protein 436 OS=Mus musculus GN=Znf436 PE=2 SV=1

 Score =  125 bits (314), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 76/117 (64%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++CD C K F++   LV H R HTGE P+HCN C ++F+R  H+V H+R HTGE
Sbjct: 282 HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGE 341

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
            P+ C  C K+F+R  HL+ H + HTGE P++C  C +SF  +  L  H R HT  +
Sbjct: 342 KPYECTACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEK 398

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 74/117 (63%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++CD C   F    +L  H+R HTGE P  CN C K+FTR  +++ H R HTGE
Sbjct: 324 HTGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGE 383

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
            P+ C+ C KAF+ +  L  H+R+HTGE P+ CT C K+FT    LT HI+ HT  +
Sbjct: 384 KPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEK 440

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9Y6Q3|ZFP37_HUMAN Zinc finger protein 37 homolog OS=Homo sapiens GN=ZFP37 PE=2 SV=3

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 73/114 (64%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE+P  C+ C K F + E L  H R HTGE P+ CN C K+F++K H++ H+R HTGE
Sbjct: 511 HTGESPFECNQCGKGFKQIEGLTQHQRVHTGEKPYECNECGKAFSQKSHLIVHQRTHTGE 570

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P+ C  C KAF  K  LV H R HTGE P++C  C K+F +   LT H++ H+
Sbjct: 571 KPYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVKTHS 624

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
328720798	632	PREDICTED: zinc finger protein 84-like [	0.666	0.132	0.965	1e-60
383857871	1127	PREDICTED: zinc finger protein 256-like	0.888	0.099	0.862	2e-55
350398052	1083	PREDICTED: zinc finger protein 268-like	0.888	0.103	0.862	4e-55
340720923	1084	PREDICTED: zinc finger protein 268-like	0.888	0.103	0.862	4e-55
380028964	1083	PREDICTED: zinc finger protein 184-like	0.888	0.103	0.862	4e-55
328782115	1082	PREDICTED: zinc finger protein 268-like	0.888	0.103	0.862	5e-55
357604684	1065	putative zinc finger protein [Danaus ple	0.888	0.105	0.853	7e-55
91089385	974	PREDICTED: similar to crooked legs CG149	0.888	0.114	0.836	2e-54
332030777	1019	Zinc finger protein 84 [Acromyrmex echin	0.888	0.109	0.853	3e-54
345487808	992	PREDICTED: zinc finger protein 841 isofo	0.888	0.112	0.836	4e-53

>gi|328720798|ref|XP_001947579.2| PREDICTED: zinc finger protein 84-like [Acyrthosiphon pisum]

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 112/116 (96%), Positives = 114/116 (98%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE+PHHCNYC KSFTRKDHMVYHERQHT
Sbjct: 180 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGETPHHCNYCPKSFTRKDHMVYHERQHT 239

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC+K FTRKEHLTNHIRQHT
Sbjct: 240 GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCLKVFTRKEHLTNHIRQHT 295

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857871|ref|XP_003704427.1| PREDICTED: zinc finger protein 256-like [Megachile rotundata]

 Score =  219 bits (559), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 109/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 707 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 766

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF CQYCPKAFTRKDHLVNHVR+HTGESPHKC YC KSFTRKEHLTNH+RQHT
Sbjct: 767 GETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHT 822

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398052|ref|XP_003485072.1| PREDICTED: zinc finger protein 268-like [Bombus impatiens]

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 109/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 663 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 722

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF CQYCPKAFTRKDHLVNHVR+HTGESPHKC YC KSFTRKEHLTNH+RQHT
Sbjct: 723 GETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHT 778

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720923|ref|XP_003398878.1| PREDICTED: zinc finger protein 268-like [Bombus terrestris]

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 109/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 664 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 723

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF CQYCPKAFTRKDHLVNHVR+HTGESPHKC YC KSFTRKEHLTNH+RQHT
Sbjct: 724 GETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHT 779

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028964|ref|XP_003698153.1| PREDICTED: zinc finger protein 184-like [Apis florea]

 Score =  218 bits (556), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 109/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 663 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 722

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF CQYCPKAFTRKDHLVNHVR+HTGESPHKC YC KSFTRKEHLTNH+RQHT
Sbjct: 723 GETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHT 778

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782115|ref|XP_392980.4| PREDICTED: zinc finger protein 268-like [Apis mellifera]

 Score =  218 bits (556), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 109/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 662 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 721

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF CQYCPKAFTRKDHLVNHVR+HTGESPHKC YC KSFTRKEHLTNH+RQHT
Sbjct: 722 GETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHT 777

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357604684|gb|EHJ64291.1| putative zinc finger protein [Danaus plexippus]

 Score =  218 bits (555), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 99/116 (85%), Positives = 110/116 (94%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           +WHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH CNYCAKSFTR++H+V H RQHT
Sbjct: 593 LWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHT 652

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF C YCPKAFTRKDHLVNHVR+HTGESPHKC++C KSFTRKEHLTNH+RQHT
Sbjct: 653 GETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHT 708

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91089385|ref|XP_973800.1| PREDICTED: similar to crooked legs CG14938-PA [Tribolium castaneum] gi|270012538|gb|EFA08986.1| hypothetical protein TcasGA2_TC006693 [Tribolium castaneum]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 97/116 (83%), Positives = 108/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H++ H RQHT
Sbjct: 621 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHT 680

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF C YCPKAFTRKDHLVNHVR+HTGESPHKCT+C KSFTRKEHL NH+RQHT
Sbjct: 681 GETPFRCNYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHT 736

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030777|gb|EGI70453.1| Zinc finger protein 84 [Acromyrmex echinatior]

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 99/116 (85%), Positives = 108/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 673 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 732

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF C YCPKAFTRKDHLVNHVR+HTGESPHKC YC KSFTRKEHLTNH+RQHT
Sbjct: 733 GETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHT 788

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487808|ref|XP_001606584.2| PREDICTED: zinc finger protein 841 isoform 1 [Nasonia vitripennis]

 Score =  212 bits (539), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/116 (83%), Positives = 108/116 (93%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           MWHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C +C+KSFTRK+H+V H RQHT
Sbjct: 651 MWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHT 710

Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           GETPF CQYCPKAFTRKDHLVNHVR+HTGESPH+C +C KSFTRKEHLTNH+R HT
Sbjct: 711 GETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHT 766

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
FB|FBgn0020309	962	crol "crooked legs" [Drosophil	0.920	0.120	0.827	3.1e-57
UNIPROTKB|F5H630	737	ZNF84 "Zinc finger protein 84"	0.928	0.158	0.521	2.5e-33
UNIPROTKB|P51523	738	ZNF84 "Zinc finger protein 84"	0.928	0.158	0.521	2.5e-33
UNIPROTKB|Q5TEG9	302	ZNF436 "Zinc finger protein 43	0.904	0.377	0.517	3.2e-33
UNIPROTKB|F1RI76	738	F1RI76 "Uncharacterized protei	0.928	0.158	0.512	3.2e-33
UNIPROTKB|J9NXK0	744	ZNF84 "Uncharacterized protein	0.920	0.155	0.525	3.3e-33
ZFIN|ZDB-GENE-030131-1529	346	zgc:174574 "zgc:174574" [Danio	0.928	0.338	0.521	4.1e-33
RGD|1310584	393	Zfp46 "zinc finger protein 46"	0.904	0.290	0.5	6.7e-33
UNIPROTKB|J9P0N4	873	J9P0N4 "Uncharacterized protei	0.904	0.130	0.561	8.3e-33
UNIPROTKB|J9NZD8	470	ZNF436 "Uncharacterized protei	0.904	0.242	0.491	1.8e-32

FB|FBgn0020309 crol "crooked legs" [Drosophila melanogaster (taxid:7227)]

 Score = 595 (214.5 bits), Expect = 3.1e-57, P = 3.1e-57
 Identities = 96/116 (82%), Positives = 108/116 (93%)

Query:     1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
             +WHTGETPHRCD+C+KTFTRKEHL+NHVRQHTGESPH C+YC K+FTRK+H+V H RQHT
Sbjct:   437 LWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHT 496

Query:    61 GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
             GETPF C YC KAFTRKDH+VNHVR+HTGESPHKCTYC K+FTRKEHLTNH+RQHT
Sbjct:   497 GETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHT 552

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS;IMP

GO:0007155 "cell adhesion" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IGI;IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IGI

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0031935 "regulation of chromatin silencing" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|F5H630 ZNF84 "Zinc finger protein 84" [Homo sapiens (taxid:9606)]

 Score = 371 (135.7 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 61/117 (52%), Positives = 80/117 (68%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P+ C+ C K F  K  L+NH R HTGE P  C+ C K+F+RK H++ H+R HTGE
Sbjct:   620 HTGEKPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGE 679

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
              P+ C  C KAF++K  LVNH R HTGE P++C  C K+F++K  L NH R HTV++
Sbjct:   680 KPYGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKK 736

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|P51523 ZNF84 "Zinc finger protein 84" [Homo sapiens (taxid:9606)]

 Score = 371 (135.7 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 61/117 (52%), Positives = 80/117 (68%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P+ C+ C K F  K  L+NH R HTGE P  C+ C K+F+RK H++ H+R HTGE
Sbjct:   621 HTGEKPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGE 680

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
              P+ C  C KAF++K  LVNH R HTGE P++C  C K+F++K  L NH R HTV++
Sbjct:   681 KPYGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKK 737

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0003677 "DNA binding" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|Q5TEG9 ZNF436 "Zinc finger protein 436" [Homo sapiens (taxid:9606)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 59/114 (51%), Positives = 74/114 (64%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P+ C+ C K+F R  HL+ H   HTGE PH CN C KSF R  H++ H+R H+GE
Sbjct:   188 HTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGE 247

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              P+ C+ C K+F+R  HL  H R HTGE P++CT C KSF+R   L  H R HT
Sbjct:   248 KPYECEECGKSFSRSSHLAQHQRTHTGEKPYECTECEKSFSRSSALIKHKRVHT 301

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1RI76 F1RI76 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 370 (135.3 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 60/117 (51%), Positives = 80/117 (68%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P+ C  C K F  K  L+NH R HTGE P  C+ C K+F+RK H++ H+R HTGE
Sbjct:   621 HTGEKPYECSECRKAFREKSSLINHQRTHTGEKPFECSDCGKAFSRKSHLIPHQRTHTGE 680

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
              P+ C  C KAF++K  LVNH R HTGE P++C+ C K+F++K  L NH R HT+++
Sbjct:   681 KPYGCSECRKAFSQKSQLVNHQRIHTGEKPYQCSECEKAFSQKSQLINHRRTHTLKK 737

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NXK0 ZNF84 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 370 (135.3 bits), Expect = 3.3e-33, P = 3.3e-33
 Identities = 61/116 (52%), Positives = 78/116 (67%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P+ C  C K F  K  L+NH R HTGE P  C+ C K+F+RK H++ H+R HTGE
Sbjct:   627 HTGEKPYECSECGKAFREKSSLINHQRTHTGEKPFECSVCGKTFSRKSHLIPHQRTHTGE 686

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVR 118
              P+ C  C KAF++K  LVNH R HTGE P++C  C K+F++K  L NH R HTV+
Sbjct:   687 KPYGCSECRKAFSQKSQLVNHQRIHTGEKPYQCHECGKAFSQKSQLINHQRTHTVK 742

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-030131-1529 zgc:174574 "zgc:174574" [Danio rerio (taxid:7955)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 61/117 (52%), Positives = 75/117 (64%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P+ C  C K+FT K +L+ H R HTGE P+ C  C K F RK  +  H R HTGE
Sbjct:   135 HTGEKPYTCQQCGKSFTWKRYLITHTRMHTGEKPYTCQQCGKCFARKHMLTIHMRVHTGE 194

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
              P+PCQ C K FT+K  L++H+R HTGE PH C  C  SFT K++ T H+R HT  R
Sbjct:   195 RPYPCQECGKGFTQKHILIDHMRIHTGERPHVCQQCGMSFTWKQYYTEHMRTHTGER 251

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1310584 Zfp46 "zinc finger protein 46" [Rattus norvegicus (taxid:10116)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 57/114 (50%), Positives = 76/114 (66%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P++CD C K F++   LV H R HTGE P+HCN C ++F+R  H+V H+R HTGE
Sbjct:   223 HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGE 282

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              P+ C  C K+F+R  HL+ H + HTGE P++CT C +SF  +  L  H R HT
Sbjct:   283 KPYECTACGKSFSRSSHLITHQKIHTGEKPYECTECWRSFGERSDLIKHQRTHT 336

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|J9P0N4 J9P0N4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 368 (134.6 bits), Expect = 8.3e-33, P = 8.3e-33
 Identities = 64/114 (56%), Positives = 70/114 (61%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE PH+C  C KTFTR  HL  H R HTGE PH C  C K+F R  H+  H R HTGE
Sbjct:   728 HTGEKPHKCGECGKTFTRHSHLTQHHRIHTGEKPHKCEECGKTFARHSHLTQHHRIHTGE 787

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              P  C  C K FTR  +L  H R HTGE PHKC  C K+FTR  +LT H R HT
Sbjct:   788 KPHKCGECGKTFTRHSYLTQHHRIHTGEKPHKCGECGKTFTRHSYLTQHHRIHT 841

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NZD8 ZNF436 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 56/114 (49%), Positives = 75/114 (65%)

Query:     3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             HTGE P++CD C K F++   LV H R HTGE P+HCN C ++F+R  H+V H+R HTGE
Sbjct:   300 HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGE 359

Query:    63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              P+ C  C K+F+R  HL+ H + HTGE P++C  C +SF  +  L  H R HT
Sbjct:   360 KPYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHT 413

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51523	ZNF84_HUMAN	No assigned EC number	0.5213	0.9206	0.1571	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	126
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.001
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.001
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.002
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.003

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 7  TPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHT 60
           P  C  C  +F+R EHL  H+R HTGE P  C+Y  C KSF+R   +  H R H 
Sbjct: 32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHH 87

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 27/116 (23%), Positives = 38/116 (32%), Gaps = 9/116 (7%)

Query: 1   MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES-PHHCNYCAKSFTRKDHMVYHERQ- 58
              +     R      +        +      G S P     C  SF+R   +  H R  
Sbjct: 253 SSSSASESPRSSLPTASSQSSSPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRSV 312

Query: 59  -HTGETPFPCQ----YCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEH 107
            H+GE+  P       C K F+R D L  H+  HT  SP K         F+   +
Sbjct: 313 NHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN 368

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCM--KSFTRKEHLTNHIRQHTVRRV 120
            P  C  C  +F+R +HL  H+R HTGE P +C+Y    KSF+R   L+ H+R H     
Sbjct: 32  RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNPS 91

Query: 121 NDL 123
           +  
Sbjct: 92  DLN 94

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPH 93
          P  C  C  SF+R +H+  H R HTGE P  C Y  C K+F+R   L  H+R H      
Sbjct: 33 PDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNPSD 92

Length = 467

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	126
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.96
KOG3576|consensus	267		99.84
KOG1074|consensus	958		99.83
KOG1074|consensus	958		99.76
KOG3623|consensus	1007		99.73
KOG3608|consensus	467		99.71
KOG3623|consensus	1007		99.7
KOG3576|consensus	267		99.68
KOG3608|consensus	467		99.65
PLN03086	567	PRLI-interacting factor K; Provisional	99.52
PHA00733	128	hypothetical protein	99.49
PHA02768	55	hypothetical protein; Provisional	99.26
PHA00733	128	hypothetical protein	99.25
PLN03086	567	PRLI-interacting factor K; Provisional	99.1
PHA02768	55	hypothetical protein; Provisional	99.06
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.05
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.88
KOG3993|consensus	500		98.84
KOG3993|consensus	500		98.81
PHA00616	44	hypothetical protein	98.81
PHA00616	44	hypothetical protein	98.66
PHA00732	79	hypothetical protein	98.66
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.65
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.39
PHA00732	79	hypothetical protein	98.38
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.3
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.29
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.28
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.25
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	98.03
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.0
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.99
smart00355	26	ZnF_C2H2 zinc finger.	97.98
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.98
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.72
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.72
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.66
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.58
PRK04860	160	hypothetical protein; Provisional	97.56
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.51
smart00355	26	ZnF_C2H2 zinc finger.	97.46
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.33
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.18
PRK04860	160	hypothetical protein; Provisional	97.0
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.89
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.67
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.46
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	96.15
COG4049	65	Uncharacterized protein containing archaeal-type C	96.12
KOG4173|consensus	253		96.03
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	95.76
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.57
KOG2231|consensus	669		95.48
KOG2893|consensus	341		95.02
KOG2785|consensus	390		94.91
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.85
COG5048	467	FOG: Zn-finger [General function prediction only]	94.48
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	94.48
KOG1146|consensus	1406		94.46
COG4049	65	Uncharacterized protein containing archaeal-type C	94.23
KOG1146|consensus	1406		94.16
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	93.91
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	93.73
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	93.53
KOG2186|consensus	276		93.5
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.45
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	93.36
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	93.01
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	92.67
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	92.6
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.57
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	92.38
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.2
COG5048	467	FOG: Zn-finger [General function prediction only]	92.15
KOG2231|consensus	669		92.14
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	92.0
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	91.97
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	91.8
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	91.76
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	91.63
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.48
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.75
PRK06266	178	transcription initiation factor E subunit alpha; V	90.64
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	90.42
smart00531	147	TFIIE Transcription initiation factor IIE.	90.17
COG1592	166	Rubrerythrin [Energy production and conversion]	90.14
KOG4173|consensus	253		90.13
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	90.05
KOG2186|consensus	276		90.04
PRK06266	178	transcription initiation factor E subunit alpha; V	89.84
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	89.75
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	89.5
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	89.47
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	88.86
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	88.45
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	87.8
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	87.23
PRK04023	1121	DNA polymerase II large subunit; Validated	87.03
PF07800	162	DUF1644: Protein of unknown function (DUF1644); In	86.37
KOG3408|consensus	129		85.97
smart00440	40	ZnF_C2C2 C2C2 Zinc finger. Nucleic-acid-binding mo	85.65
PF14353	128	CpXC: CpXC protein	85.56
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	84.84
COG4957	148	Predicted transcriptional regulator [Transcription	84.16
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	83.53
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	83.31
COG1198	730	PriA Primosomal protein N' (replication factor Y)	83.17
PHA00626	59	hypothetical protein	82.1
PF08790	28	zf-LYAR: LYAR-type C2HC zinc finger ; InterPro: IP	81.57
PTZ00448	373	hypothetical protein; Provisional	81.44
PF08274	30	PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR01	81.08
PRK03824	135	hypA hydrogenase nickel incorporation protein; Pro	80.87
KOG2482|consensus	423		80.86
PF15135	278	UPF0515: Uncharacterised protein UPF0515	80.29
PF12907	40	zf-met2: Zinc-binding	80.27

>KOG2462|consensus

Probab=99.97  E-value=1.2e-30  Score=156.14  Aligned_cols=107  Identities=37%  Similarity=0.739  Sum_probs=74.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHH
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVR   85 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~   85 (126)
                      ++.+.|..|+++|-+...|..|+++|.  .+++|.+||+.|...+.|+.|+++|+|||||.|+.|+++|...++|..|++
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH
Confidence            455666666666666666666666665  356677777777777777777777777777777777777777777777777


Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHH
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      +|.+.+.|.|..|+|+|+..+.|.+|...
T Consensus       237 THS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  237 THSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            77777777777777777777777777544

>KOG2462|consensus

Probab=99.96  E-value=2.3e-30  Score=154.88  Aligned_cols=117  Identities=32%  Similarity=0.676  Sum_probs=108.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcC---CCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHH
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTG---ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN   82 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~   82 (126)
                      ...|.|.+||+.+...++|..|++.|..   .+.+.|..|++.+.+...|..|+++|.-  +.+|..||+.|.+...|+.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l--~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL--PCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC--CcccccccccccchHHhhc
Confidence            3459999999999999999999999853   5678999999999999999999999984  6899999999999999999


Q ss_pred             HHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccccCCC
Q psy10762         83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLP  124 (126)
Q Consensus        83 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  124 (126)
                      |+++|+|||||.|+.|+|.|..+++|+.|+.+|.+.+..+++
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~  247 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCP  247 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCc
Confidence            999999999999999999999999999999999998876654

>KOG3576|consensus

Probab=99.84  E-value=1.2e-21  Score=113.19  Aligned_cols=113  Identities=29%  Similarity=0.597  Sum_probs=103.5

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHH
Q psy10762          5 GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHV   84 (126)
Q Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~   84 (126)
                      +...|.|.+|++.|.....|..|+..|...+.+.|..||+.|.+.-.|.+|+++|+|.+||.|..|+++|.+.-+|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcC-----------CCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         85 RRHTG-----------ESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        85 ~~~~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      +.-+|           ++.|+|..||.+-.....+..|+..|+.
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            75432           5679999999998888899999888764

>KOG1074|consensus

Probab=99.83  E-value=9.5e-22  Score=132.49  Aligned_cols=51  Identities=37%  Similarity=0.734  Sum_probs=49.4

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +|..|.++++-...|+.|.++|+||+||+|++||+.|..+-+|+.|+-+|.
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk  657 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHK  657 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccc
Confidence            799999999999999999999999999999999999999999999999886

>KOG1074|consensus

Probab=99.76  E-value=1.4e-19  Score=122.23  Aligned_cols=52  Identities=35%  Similarity=0.721  Sum_probs=49.8

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      .|..|++.|...+.|+.|+++|+++++|.|..|++.|..+.+|+.||.+|.-
T Consensus       881 ~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  881 VCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             hhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccc
Confidence            5899999999999999999999999999999999999999999999998873

>KOG3623|consensus

Probab=99.73  E-value=1.2e-18  Score=116.60  Aligned_cols=106  Identities=30%  Similarity=0.682  Sum_probs=94.5

Q ss_pred             eeccccccccCChhHHHHHHHhhc--CCCCcccCCcccccCCchHHHHHHhhhcCC-------------CCcccCCCCCc
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHT--GESPHHCNYCAKSFTRKDHMVYHERQHTGE-------------TPFPCQYCPKA   73 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~--~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~-------------~~~~C~~C~~~   73 (126)
                      ..|+.|...+.....++.|+...+  .+..|.|.+|..+|.+...|.+|+.+|...             +.|.|..|+++
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            579999999999999999998654  355689999999999999999999877432             45999999999


Q ss_pred             CCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHH
Q psy10762         74 FTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        74 ~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      |...-.|..|+++|.||+||.|+.|+|+|+.+..+..|+-.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            99999999999999999999999999999998888888754

>KOG3608|consensus

Probab=99.71  E-value=2.2e-17  Score=102.76  Aligned_cols=79  Identities=23%  Similarity=0.537  Sum_probs=40.4

Q ss_pred             cccCCcccccCCchHHHHHHh-hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcc--cccccCCHHHHHHHHH
Q psy10762         37 HHCNYCAKSFTRKDHMVYHER-QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIR  113 (126)
Q Consensus        37 ~~c~~C~~~~~~~~~l~~h~~-~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~  113 (126)
                      |+|+.|..+....++|..|++ .|...+||.|+.|...+.+...|.+|...|. +..|+|..  |..+|.+...|++|++
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHH
Confidence            445555555555555555544 2334455555555555555555555555444 34455543  5555555555555554


Q ss_pred             Hhh
Q psy10762        114 QHT  116 (126)
Q Consensus       114 ~h~  116 (126)
                      .++
T Consensus       343 evh  345 (467)
T KOG3608|consen  343 EVH  345 (467)
T ss_pred             Hhc
Confidence            433

>KOG3623|consensus

Probab=99.70  E-value=3.4e-18  Score=114.54  Aligned_cols=80  Identities=34%  Similarity=0.833  Sum_probs=72.1

Q ss_pred             CCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHH
Q psy10762         34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        34 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  113 (126)
                      +..|.|++|.++|.-.++|.+|.-.|.|.+||+|..|.++|...-.|..|.+.|.||+||.|..|+|+|+.+..+..||.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            34689999999999999999999999999999999999999999999999999999999999999999998877777764

>KOG3576|consensus

Probab=99.68  E-value=6.2e-18  Score=98.01  Aligned_cols=81  Identities=31%  Similarity=0.658  Sum_probs=76.9

Q ss_pred             CCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHH
Q psy10762         34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        34 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  113 (126)
                      ...|.|.+|++.|.....|.+|++.|...+.+-|..||++|...-.|.+|.++|+|.+||+|..|++.|.++-.|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            44689999999999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             H
Q psy10762        114 Q  114 (126)
Q Consensus       114 ~  114 (126)
                      .
T Consensus       195 k  195 (267)
T KOG3576|consen  195 K  195 (267)
T ss_pred             H
Confidence            5

>KOG3608|consensus

Probab=99.65  E-value=2.4e-16  Score=98.21  Aligned_cols=113  Identities=26%  Similarity=0.590  Sum_probs=86.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhh--cCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhh
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQH--TGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDH   79 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h--~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~   79 (126)
                      .|+++|...|+.||..|.....|-.|.+.-  ....+|.|..|.+.|.....|..|+..|..  -|.||.|..+....++
T Consensus       201 ~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ss  278 (467)
T KOG3608|consen  201 THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASS  278 (467)
T ss_pred             hcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHH
Confidence            577788888888888888887777776532  344577888888888888888888777766  4788888888888888


Q ss_pred             HHHHHHh-hcCCCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         80 LVNHVRR-HTGESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        80 l~~h~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |..|++. |...+||+|..|.+.|...++|.+|..+|.
T Consensus       279 L~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            8888875 666778888888888888888888877766

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.52  E-value=7e-14  Score=93.28  Aligned_cols=103  Identities=19%  Similarity=0.459  Sum_probs=87.1

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCC---------
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTR---------   76 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~---------   76 (126)
                      +..+.|+.|++.|. ...|..|+..++  .++.|+ |+..+ ....|..|+..+.+.+++.|+.|+..+..         
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            45678999999996 578999999975  679999 99654 66889999999999999999999998852         


Q ss_pred             -hhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHh
Q psy10762         77 -KDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        77 -~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  115 (126)
                       ...|..|...+ +.+++.|..||+.+..+ .|..|+-.-
T Consensus       526 ~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        526 RLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             hhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHh
Confidence             34788898885 88999999999999988 788886553

>PHA00733 hypothetical protein

Probab=99.49  E-value=5.9e-14  Score=77.85  Aligned_cols=112  Identities=14%  Similarity=0.199  Sum_probs=78.8

Q ss_pred             CCCcceeccccccccC-ChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHH--H---hhhcCCCCcccCCCCCcCCCh
Q psy10762          4 TGETPHRCDYCAKTFT-RKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYH--E---RQHTGETPFPCQYCPKAFTRK   77 (126)
Q Consensus         4 ~~~~~~~C~~C~~~f~-~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h--~---~~~~~~~~~~C~~C~~~~~~~   77 (126)
                      +|.+.|.-+.=|..|- +.+.|..+-......+++.|.+|...+.....|..+  +   ....+.+||.|+.|++.|.+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~   86 (128)
T PHA00733          7 SGSKKYLSNHKGIFIHVTLEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSS   86 (128)
T ss_pred             cchHhhcccCCCeEEecCHHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCH
Confidence            3444444333333322 223344333333345678899998887776666554  1   133457899999999999999


Q ss_pred             hhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         78 DHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        78 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ..|..|++.+  +.+|.|.+|++.|.....|.+|+...++
T Consensus        87 s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         87 VSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            9999999876  4679999999999999999999887664

>PHA02768 hypothetical protein; Provisional

Probab=99.26  E-value=2.2e-12  Score=60.17  Aligned_cols=44  Identities=18%  Similarity=0.557  Sum_probs=35.3

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHH
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLT  109 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~  109 (126)
                      .|+|+.||+.|...+.|..|+++|+  ++|.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3788888888888888888888887  6888888888888766553

>PHA00733 hypothetical protein

Probab=99.25  E-value=1e-11  Score=68.92  Aligned_cols=82  Identities=20%  Similarity=0.300  Sum_probs=67.2

Q ss_pred             CcceeccccccccCChhHHHHH--HH---hhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhH
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNH--VR---QHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHL   80 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h--~~---~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l   80 (126)
                      ++.+.|.+|...|.....+..+  +.   .+.+..+|.|+.|+..|.....|..|+..+  ..+|.|+.|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4678899999988887776665  11   233467899999999999999999999875  4579999999999999999


Q ss_pred             HHHHHhhcC
Q psy10762         81 VNHVRRHTG   89 (126)
Q Consensus        81 ~~h~~~~~~   89 (126)
                      ..|+...++
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            999876543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.10  E-value=1.7e-10  Score=77.51  Aligned_cols=101  Identities=18%  Similarity=0.424  Sum_probs=76.0

Q ss_pred             eeccccccccCChhHHHHHHHhhcC-------------------CCCcccCCcccccCCchHHHHHHhhhcCCCCcccCC
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTG-------------------ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY   69 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~-------------------~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~   69 (126)
                      -.|.-|...... .+|..|......                   +..+.|+.|+..|. ...|..|+..++  +++.|+ 
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-  482 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-  482 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-
Confidence            356667665544 345566543221                   23467899999885 677999999875  789999 


Q ss_pred             CCCcCCChhhHHHHHHhhcCCCCccCcccccccCC----------HHHHHHHHHHh
Q psy10762         70 CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTR----------KEHLTNHIRQH  115 (126)
Q Consensus        70 C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h  115 (126)
                      |+..+ ....|..|+.++...+++.|..|++.|..          .+.|..|..+.
T Consensus       483 Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C  537 (567)
T PLN03086        483 CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC  537 (567)
T ss_pred             CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc
Confidence            99765 56899999999999999999999999852          45788998875

>PHA02768 hypothetical protein; Provisional

Probab=99.06  E-value=1.1e-10  Score=54.59  Aligned_cols=39  Identities=18%  Similarity=0.588  Sum_probs=21.5

Q ss_pred             eeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCc
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRK   49 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~   49 (126)
                      |.|+.||+.|....+|..|++.|+  ++++|..|++.|...
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccc
Confidence            555555555555555555555555  345555555555443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.05  E-value=1.3e-10  Score=46.69  Aligned_cols=25  Identities=60%  Similarity=1.123  Sum_probs=18.1

Q ss_pred             hHHHHHHhhcCCCCccCcccccccC
Q psy10762         79 HLVNHVRRHTGESPHKCTYCMKSFT  103 (126)
Q Consensus        79 ~l~~h~~~~~~~~~~~C~~C~~~f~  103 (126)
                      +|.+|+++|+++++|.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3567777777777777777777775

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.88  E-value=1.3e-09  Score=43.75  Aligned_cols=24  Identities=50%  Similarity=1.115  Sum_probs=16.1

Q ss_pred             HHHHHhhhcCCCCcccCCCCCcCC
Q psy10762         52 MVYHERQHTGETPFPCQYCPKAFT   75 (126)
Q Consensus        52 l~~h~~~~~~~~~~~C~~C~~~~~   75 (126)
                      |..|+++|.|++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            566666777777777777766654

...

>KOG3993|consensus

Probab=98.84  E-value=1e-09  Score=70.54  Aligned_cols=114  Identities=25%  Similarity=0.388  Sum_probs=82.1

Q ss_pred             ceeccccccccCChhHHHHHHHhhcC---------------------------------CCCcccCCcccccCCchHHHH
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTG---------------------------------ESPHHCNYCAKSFTRKDHMVY   54 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~---------------------------------~~~~~c~~C~~~~~~~~~l~~   54 (126)
                      -|+|++|+++|....||.+|.+.|-.                                 +..|.|..|++.|.....|.+
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            59999999999999999999987732                                 123789999999999999999


Q ss_pred             HHhhhcCCC------C----------------------------------------cccCCCCCcCCChhhHHHHHHhhc
Q psy10762         55 HERQHTGET------P----------------------------------------FPCQYCPKAFTRKDHLVNHVRRHT   88 (126)
Q Consensus        55 h~~~~~~~~------~----------------------------------------~~C~~C~~~~~~~~~l~~h~~~~~   88 (126)
                      |+..|....      +                                        -.++.++..+.++..--.+.+...
T Consensus       375 Hqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~  454 (500)
T KOG3993|consen  375 HQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGI  454 (500)
T ss_pred             hHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccc
Confidence            987664220      0                                        123445544444433333334444


Q ss_pred             CCCCccCcccccccCCHHHHHHHHHHhhhcccc
Q psy10762         89 GESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  121 (126)
                      .+.-|.|..|.-.|-++..|.+|+..-|....+
T Consensus       455 ~~q~f~~ky~~atfyss~~ltrhin~~Hpse~r  487 (500)
T KOG3993|consen  455 AEQGFTCKYCPATFYSSPGLTRHINKCHPSELR  487 (500)
T ss_pred             hhhccccccchHhhhcCcchHhHhhhcChHHhh
Confidence            456789999999999999999998886655444

>KOG3993|consensus

Probab=98.81  E-value=8.9e-10  Score=70.80  Aligned_cols=27  Identities=30%  Similarity=0.491  Sum_probs=23.8

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ..|.|..|+|.|.....|++|+-.|..
T Consensus       355 gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  355 GIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            359999999999999999999888763

>PHA00616 hypothetical protein

Probab=98.81  E-value=2.5e-09  Score=47.71  Aligned_cols=29  Identities=17%  Similarity=0.343  Sum_probs=17.0

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      +|.|+.||+.|...+.|.+|++.|++++.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            35566666666666666666666655543

>PHA00616 hypothetical protein

Probab=98.66  E-value=1.4e-08  Score=45.30  Aligned_cols=33  Identities=15%  Similarity=0.351  Sum_probs=19.1

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      ||.|..||+.|....+|..|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355666666666666666666665555555443

>PHA00732 hypothetical protein

Probab=98.66  E-value=2.3e-08  Score=50.90  Aligned_cols=45  Identities=24%  Similarity=0.450  Sum_probs=29.0

Q ss_pred             CcccCCcccccCCchHHHHHHhh-hcCCCCcccCCCCCcCCChhhHHHHHHh
Q psy10762         36 PHHCNYCAKSFTRKDHMVYHERQ-HTGETPFPCQYCPKAFTRKDHLVNHVRR   86 (126)
Q Consensus        36 ~~~c~~C~~~~~~~~~l~~h~~~-~~~~~~~~C~~C~~~~~~~~~l~~h~~~   86 (126)
                      +|.|+.|++.|.....|..|++. |.   ++.|+.|++.|.   .+..|..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            35677777777777777777764 33   246777777775   34555543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.65  E-value=8.6e-08  Score=45.42  Aligned_cols=50  Identities=28%  Similarity=0.584  Sum_probs=37.2

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcC-C-CCccCcccccccCCHHHHHHHHHHhh
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTG-E-SPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~-~-~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      .|.||.|++ ..+...|..|...... + +.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            378999998 4566788889876443 2 4588999988655  48889988765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.63  E-value=2.9e-08  Score=38.66  Aligned_cols=23  Identities=48%  Similarity=0.917  Sum_probs=19.6

Q ss_pred             ccCcccccccCCHHHHHHHHHHh
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h  115 (126)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67888999999999999998774

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.39  E-value=3.1e-07  Score=35.86  Aligned_cols=24  Identities=42%  Similarity=0.826  Sum_probs=18.2

Q ss_pred             ccCcccccccCCHHHHHHHHHHhh
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |.|+.|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578889999999889998888764

...

>PHA00732 hypothetical protein

Probab=98.38  E-value=3.4e-07  Score=46.65  Aligned_cols=46  Identities=28%  Similarity=0.466  Sum_probs=37.9

Q ss_pred             ceeccccccccCChhHHHHHHHh-hcCCCCcccCCcccccCCchHHHHHHhhh
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCNYCAKSFTRKDHMVYHERQH   59 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~C~~~~~~~~~l~~h~~~~   59 (126)
                      ||.|..|++.|....+|..|+.. |.+   +.|+.|++.|.   .+..|+...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhccc
Confidence            58899999999999999999984 553   58999999997   467777443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.30  E-value=5.6e-07  Score=47.94  Aligned_cols=23  Identities=39%  Similarity=0.967  Sum_probs=15.3

Q ss_pred             CccCcccccccCCHHHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      .+.|..|++.|.+...|..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            46677777777777777777665

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.29  E-value=7.8e-07  Score=34.47  Aligned_cols=23  Identities=39%  Similarity=0.907  Sum_probs=16.9

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.28  E-value=4.7e-07  Score=36.55  Aligned_cols=25  Identities=36%  Similarity=0.731  Sum_probs=20.3

Q ss_pred             CccCcccccccCCHHHHHHHHHHhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4778888888888888888887764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.25  E-value=3e-06  Score=40.11  Aligned_cols=48  Identities=25%  Similarity=0.546  Sum_probs=24.3

Q ss_pred             eeccccccccCChhHHHHHHHhh-cC-CCCcccCCcccccCCchHHHHHHhhh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQH-TG-ESPHHCNYCAKSFTRKDHMVYHERQH   59 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h-~~-~~~~~c~~C~~~~~~~~~l~~h~~~~   59 (126)
                      |.|+.|++ ..+...|..|.... .. .+.+.|++|...+.  ..|..|+...
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            56666666 44455566665442 22 23455666654322  2455555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.03  E-value=3.7e-06  Score=38.44  Aligned_cols=33  Identities=18%  Similarity=0.486  Sum_probs=21.9

Q ss_pred             cCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         88 TGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        88 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      ..+.|..|++|+..+++..+|++|+++++..+.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            346778899999999999999999988776553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.00  E-value=5.1e-06  Score=33.42  Aligned_cols=25  Identities=44%  Similarity=0.830  Sum_probs=18.0

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777776553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.99  E-value=1.4e-06  Score=54.70  Aligned_cols=52  Identities=23%  Similarity=0.593  Sum_probs=38.3

Q ss_pred             CCCcccCC--CCCcCCChhhHHHHHHhh-------------------cCCCCccCcccccccCCHHHHHHHHH
Q psy10762         62 ETPFPCQY--CPKAFTRKDHLVNHVRRH-------------------TGESPHKCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        62 ~~~~~C~~--C~~~~~~~~~l~~h~~~~-------------------~~~~~~~C~~C~~~f~~~~~l~~H~~  113 (126)
                      ++||.|++  |.+.|....-|.-|+.-.                   ...+||+|++|+|+++....|.-|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            46777765  777777776666665321                   12589999999999999988888743

>smart00355 ZnF_C2H2 zinc finger

Probab=97.98  E-value=8.3e-06  Score=32.16  Aligned_cols=24  Identities=38%  Similarity=0.690  Sum_probs=20.6

Q ss_pred             ccCcccccccCCHHHHHHHHHHhh
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |.|..|++.|...+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578899999999999999988664

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.98  E-value=9.7e-06  Score=31.42  Aligned_cols=23  Identities=39%  Similarity=0.863  Sum_probs=14.0

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      |.|+.|+..|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            46677777777777777776654

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.72  E-value=3.6e-05  Score=40.90  Aligned_cols=74  Identities=23%  Similarity=0.588  Sum_probs=22.1

Q ss_pred             eccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhc
Q psy10762         10 RCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT   88 (126)
Q Consensus        10 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~   88 (126)
                      .|..|+..|.....+..|+...++-.   .+. ...+.....+..+...... ..+.|..|++.|.+...|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~-~~~l~~~~~~~~~~~~~~~-~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD---IPD-QKYLVDPNRLLNYLRKKVK-ESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccc---ccc-ccccccccccccccccccC-CCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            48899999999999999986554421   111 1112233333334332222 26899999999999999999999754

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.72  E-value=2.3e-05  Score=30.84  Aligned_cols=23  Identities=35%  Similarity=0.758  Sum_probs=18.7

Q ss_pred             ccCcccccccCCHHHHHHHHHHh
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h  115 (126)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888888888888888887653

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.66  E-value=1.1e-05  Score=50.88  Aligned_cols=69  Identities=20%  Similarity=0.444  Sum_probs=41.8

Q ss_pred             Ccceeccc--cccccCChhHHHHHHHh-hcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHH
Q psy10762          6 ETPHRCDY--CAKTFTRKEHLVNHVRQ-HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN   82 (126)
Q Consensus         6 ~~~~~C~~--C~~~f~~~~~l~~h~~~-h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~   82 (126)
                      ++||+|++  |.+.|.....|+.|+.. |...+...-+          .-..+.......|||.|.+|++.|....-|.-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCcccee
Confidence            57888865  88888888778877643 2222211111          01111122345689999999999988877765


Q ss_pred             HH
Q psy10762         83 HV   84 (126)
Q Consensus        83 h~   84 (126)
                      |.
T Consensus       417 Hr  418 (423)
T COG5189         417 HR  418 (423)
T ss_pred             cc
Confidence            54

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.58  E-value=7.3e-05  Score=29.08  Aligned_cols=23  Identities=35%  Similarity=0.690  Sum_probs=16.5

Q ss_pred             ccCcccccccCCHHHHHHHHHHhh
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |+|+.|+.... ...|.+|+++++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57888888777 778888887765

>PRK04860 hypothetical protein; Provisional

Probab=97.56  E-value=5.6e-05  Score=43.78  Aligned_cols=38  Identities=26%  Similarity=0.629  Sum_probs=32.4

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCH
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRK  105 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~  105 (126)
                      +|.|. |+.   ....+.+|.+++.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58998 986   666788999999999999999999988653

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.51  E-value=0.00021  Score=32.81  Aligned_cols=32  Identities=19%  Similarity=0.409  Sum_probs=19.1

Q ss_pred             CCCCcccCCcccccCCchHHHHHHhhhcCCCC
Q psy10762         33 GESPHHCNYCAKSFTRKDHMVYHERQHTGETP   64 (126)
Q Consensus        33 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~   64 (126)
                      .+.|..|++|+..+.+..+|.+|+...++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            44566778888777777778888777776655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.46  E-value=0.00012  Score=28.61  Aligned_cols=23  Identities=43%  Similarity=0.823  Sum_probs=14.5

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      |.|..|++.|.....+..|+..|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666666544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.33  E-value=0.0002  Score=28.06  Aligned_cols=22  Identities=36%  Similarity=0.834  Sum_probs=16.0

Q ss_pred             eeccccccccCChhHHHHHHHh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      |.|..|+..|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5677777777777777777654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.18  E-value=8.9e-05  Score=29.75  Aligned_cols=22  Identities=27%  Similarity=0.677  Sum_probs=16.7

Q ss_pred             ccCcccccccCCHHHHHHHHHH
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5688888888888888777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.00  E-value=0.00067  Score=39.39  Aligned_cols=38  Identities=26%  Similarity=0.635  Sum_probs=31.4

Q ss_pred             CcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCCh
Q psy10762         36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRK   77 (126)
Q Consensus        36 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   77 (126)
                      +|.|. |+.   ....+..|.+++.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            47887 876   677788999999999999999999877543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.89  E-value=0.0012  Score=25.92  Aligned_cols=21  Identities=24%  Similarity=0.602  Sum_probs=13.5

Q ss_pred             ccCcccccccCCHHHHHHHHHH
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      ..|+.||+.| ..+.|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3577777777 44466777654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.67  E-value=0.0022  Score=24.72  Aligned_cols=21  Identities=24%  Similarity=0.629  Sum_probs=9.5

Q ss_pred             eeccccccccCChhHHHHHHHh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      |.|+.|+.... ..+|..|+..
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            34555555444 4455555544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.46  E-value=0.0008  Score=26.89  Aligned_cols=22  Identities=32%  Similarity=0.753  Sum_probs=16.1

Q ss_pred             eeccccccccCChhHHHHHHHh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      |.|..|++.|.+...+..|+..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677888888887777777643

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=96.15  E-value=0.0046  Score=26.15  Aligned_cols=23  Identities=22%  Similarity=0.527  Sum_probs=19.2

Q ss_pred             CccCcccccccCCHHHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      +|.|..|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57799999999988888888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=96.12  E-value=0.0038  Score=29.20  Aligned_cols=28  Identities=25%  Similarity=0.573  Sum_probs=19.2

Q ss_pred             CCCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         89 GESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      ||..+.|+.|+..|....++.+|....+
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4556677777777777777777765543

>KOG4173|consensus

Probab=96.03  E-value=0.0031  Score=37.75  Aligned_cols=76  Identities=22%  Similarity=0.546  Sum_probs=56.1

Q ss_pred             CcccCC--cccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhc----------CCCCccCcc--cccc
Q psy10762         36 PHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT----------GESPHKCTY--CMKS  101 (126)
Q Consensus        36 ~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~----------~~~~~~C~~--C~~~  101 (126)
                      .+.|+.  |...+.....+..|...-++.   .|..|.++|.+...|..|+...+          |.-.|.|.+  |+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            456766  667777777777776655554   89999999999888888886533          334588955  9999


Q ss_pred             cCCHHHHHHHHHH
Q psy10762        102 FTRKEHLTNHIRQ  114 (126)
Q Consensus       102 f~~~~~l~~H~~~  114 (126)
                      |.....-..|+-.
T Consensus       156 FkT~r~RkdH~I~  168 (253)
T KOG4173|consen  156 FKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhHHHH
Confidence            9998888888544

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=95.76  E-value=0.0063  Score=25.56  Aligned_cols=8  Identities=38%  Similarity=0.982  Sum_probs=3.7

Q ss_pred             CccCcccc
Q psy10762         92 PHKCTYCM   99 (126)
Q Consensus        92 ~~~C~~C~   99 (126)
                      ++.|++|+
T Consensus        17 ~~~CP~Cg   24 (33)
T cd00350          17 PWVCPVCG   24 (33)
T ss_pred             CCcCcCCC
Confidence            34444443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.57  E-value=0.015  Score=24.52  Aligned_cols=22  Identities=27%  Similarity=0.578  Sum_probs=15.3

Q ss_pred             ceeccccccccCChhHHHHHHH
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVR   29 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~   29 (126)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777666766664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231|consensus

Probab=95.48  E-value=0.052  Score=38.52  Aligned_cols=97  Identities=23%  Similarity=0.431  Sum_probs=57.7

Q ss_pred             ccCChhHHHHHHHhhcCCCCcccCCcc---------cccCCchHHHHHHhhhcC-CC----CcccCCCCCcCCChhhHHH
Q psy10762         17 TFTRKEHLVNHVRQHTGESPHHCNYCA---------KSFTRKDHMVYHERQHTG-ET----PFPCQYCPKAFTRKDHLVN   82 (126)
Q Consensus        17 ~f~~~~~l~~h~~~h~~~~~~~c~~C~---------~~~~~~~~l~~h~~~~~~-~~----~~~C~~C~~~~~~~~~l~~   82 (126)
                      .|.....|+.|+..-+.  .+.|.+|-         ........|..|+..... ++    .-.|..|...|.....+.+
T Consensus       123 ~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~r  200 (669)
T KOG2231|consen  123 EFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYR  200 (669)
T ss_pred             chhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHH
Confidence            33477889999854332  23444432         223345567777654322 11    1368889888888888888


Q ss_pred             HHHhhcCCCCccC---cccccccCCHHHHHHHHHHhh
Q psy10762         83 HVRRHTGESPHKC---TYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        83 h~~~~~~~~~~~C---~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |++..+-...| |   ..++..|.....|..|.|..|
T Consensus       201 H~~~~h~~chf-C~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  201 HLRFDHEFCHF-CDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             hhccceeheee-cCcccccchhcccchHHHHHhhhcC
Confidence            88754322211 2   223456777888888887755

>KOG2893|consensus

Probab=95.02  E-value=0.0048  Score=37.86  Aligned_cols=46  Identities=28%  Similarity=0.660  Sum_probs=34.8

Q ss_pred             cCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHH-HHHhh
Q psy10762         67 CQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH-IRQHT  116 (126)
Q Consensus        67 C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~  116 (126)
                      |..|.+.|..+..|..|++    .+.|+|.+|.|..-+.-.|..| +.+|.
T Consensus        13 cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhhh
Confidence            6779999999988888866    5778999998876555577777 44443

>KOG2785|consensus

Probab=94.91  E-value=0.16  Score=33.54  Aligned_cols=50  Identities=22%  Similarity=0.553  Sum_probs=34.9

Q ss_pred             cccCCCCCcCCChhhHHHHHHhhcC-----------------------CCCccCcccc---cccCCHHHHHHHHHH
Q psy10762         65 FPCQYCPKAFTRKDHLVNHVRRHTG-----------------------ESPHKCTYCM---KSFTRKEHLTNHIRQ  114 (126)
Q Consensus        65 ~~C~~C~~~~~~~~~l~~h~~~~~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~  114 (126)
                      -.|-.|++.+.+...-..|+..+++                       ..-+.|..|+   +.|.+....+.||..
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            4577787777777777777765543                       1346777787   788887777888754

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.85  E-value=0.064  Score=29.24  Aligned_cols=48  Identities=17%  Similarity=0.275  Sum_probs=24.0

Q ss_pred             cCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         67 CQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        67 C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |-.|...|.......  ...-.....|.|+.|...|=..-+.-.|...|.
T Consensus        58 C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        58 CFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhhhhccC
Confidence            666666665432100  000122345777777777765555555555443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.48  E-value=0.0062  Score=40.50  Aligned_cols=58  Identities=36%  Similarity=0.705  Sum_probs=45.8

Q ss_pred             CcccCCCCCcCCChhhHHHHHH--hhcCC--CCccCc--ccccccCCHHHHHHHHHHhhhcccc
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVR--RHTGE--SPHKCT--YCMKSFTRKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  121 (126)
                      ++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.+...+..|..+|+.....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc
Confidence            5677778888888888888888  78888  888888  6888888888888888777765543

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=94.48  E-value=0.027  Score=22.30  Aligned_cols=10  Identities=30%  Similarity=0.647  Sum_probs=5.9

Q ss_pred             cCcccccccC
Q psy10762         94 KCTYCMKSFT  103 (126)
Q Consensus        94 ~C~~C~~~f~  103 (126)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            4666666653

Several members are annotated as putative helicases.

>KOG1146|consensus

Probab=94.46  E-value=0.01  Score=44.58  Aligned_cols=75  Identities=24%  Similarity=0.368  Sum_probs=49.2

Q ss_pred             hcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHh------hcCCCCccCcccccccCC
Q psy10762         31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRR------HTGESPHKCTYCMKSFTR  104 (126)
Q Consensus        31 h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~------~~~~~~~~C~~C~~~f~~  104 (126)
                      ++..+.+.|+.|++.+.....|..|++..+.+-.-  ..|.       ..+.|.+.      -.+.++|.|..|..++..
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~-------~gq~~~~~arg~~~~~~~~p~~C~~C~~sttt  530 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCK-------AGQNHPRLARGEVYRCPGKPYPCRACNYSTTT  530 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccch--hHhH-------hccccccccccccccCCCCcccceeeeeeeec
Confidence            34446678888998888888888888864443211  1121       11111111      123578999999999999


Q ss_pred             HHHHHHHHHH
Q psy10762        105 KEHLTNHIRQ  114 (126)
Q Consensus       105 ~~~l~~H~~~  114 (126)
                      ...|.+|+..
T Consensus       531 ng~LsihlqS  540 (1406)
T KOG1146|consen  531 NGNLSIHLQS  540 (1406)
T ss_pred             chHHHHHHHH
Confidence            9999999755

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.23  E-value=0.034  Score=26.09  Aligned_cols=27  Identities=33%  Similarity=0.730  Sum_probs=17.1

Q ss_pred             CCCcceeccccccccCChhHHHHHHHh
Q psy10762          4 TGETPHRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      .|+.-+.|+-|+..|....++..|...
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            345556677777777666666666543

>KOG1146|consensus

Probab=94.16  E-value=0.0076  Score=45.26  Aligned_cols=103  Identities=17%  Similarity=0.275  Sum_probs=58.4

Q ss_pred             eeccccccccCChhHHHHHHHhhc----CCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHH
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHT----GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHV   84 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~----~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~   84 (126)
                      ..|.+|...|........+-.-..    ....+.|..|.+.+.....+. ++.   ....|.|..|...|.....+..|.
T Consensus      1229 l~~~~~e~~f~~~~~~~~~a~~~~~~~~~sGe~~c~~~~~~~~~~~~~~-~l~---~~~~~~~~~~~~~~~~~~~l~~~~ 1304 (1406)
T KOG1146|consen 1229 LLPNALEQPFPQEPEPTATAPPKPPELPASGEGECGAVDELLTPSFGIS-TLD---VTHRYLCRQCKMAFDGEAPLTAHQ 1304 (1406)
T ss_pred             ccHHhhhcCccCcccccccCCCCCCcCcCCCcchhhhccccccCcccee-ecc---cchhHHHHHHHhhhcchhHHHHHH
Confidence            345556666665554433321110    011244555555555544433 221   223466777777777766666666


Q ss_pred             Hhh-----------------cCCCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         85 RRH-----------------TGESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        85 ~~~-----------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +..                 ..-..| |..|...|+....|..|+++..
T Consensus      1305 ~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~~ 1352 (1406)
T KOG1146|consen 1305 RKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSSA 1352 (1406)
T ss_pred             HHHHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHhh
Confidence            421                 112345 9999999999999999999843

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=93.91  E-value=0.056  Score=25.78  Aligned_cols=11  Identities=27%  Similarity=0.679  Sum_probs=6.0

Q ss_pred             CCCccCccccc
Q psy10762         90 ESPHKCTYCMK  100 (126)
Q Consensus        90 ~~~~~C~~C~~  100 (126)
                      ..+|.|+.||.
T Consensus        48 g~~Y~Cp~CGF   58 (61)
T COG2888          48 GNPYRCPKCGF   58 (61)
T ss_pred             CCceECCCcCc
Confidence            34566666653

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=93.73  E-value=0.05  Score=23.46  Aligned_cols=32  Identities=25%  Similarity=0.624  Sum_probs=15.3

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCCCccCccccccc
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSF  102 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  102 (126)
                      .||.|+..|.-...     ++-.+....+|+.|+-.|
T Consensus         4 ~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHH-----HcccCCcEEECCCCCcEe
Confidence            46666655544322     111223445666666555

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=93.53  E-value=0.061  Score=23.04  Aligned_cols=32  Identities=19%  Similarity=0.487  Sum_probs=16.6

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCCCccCccccccc
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSF  102 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  102 (126)
                      .|+.|+..|.-....     +-......+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            566666665444331     22233445676676655

>KOG2186|consensus

Probab=93.50  E-value=0.052  Score=33.75  Aligned_cols=48  Identities=27%  Similarity=0.509  Sum_probs=31.8

Q ss_pred             CcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHh
Q psy10762         36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRR   86 (126)
Q Consensus        36 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   86 (126)
                      .|.|..||.+..-. .+.+|+..-.+ .-|.|..|+..|-. .+...|..-
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            36788888766543 35667766656 46788888888876 455566543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.45  E-value=0.11  Score=33.98  Aligned_cols=74  Identities=23%  Similarity=0.450  Sum_probs=43.8

Q ss_pred             ccCCcccccCCchHHHHHHhhhcCCCCcccCCCC----CcCCChhhHHHHHHhhcCCCCccCcc--cc----cccCCHHH
Q psy10762         38 HCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCP----KAFTRKDHLVNHVRRHTGESPHKCTY--CM----KSFTRKEH  107 (126)
Q Consensus        38 ~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~----~~~~~~~~l~~h~~~~~~~~~~~C~~--C~----~~f~~~~~  107 (126)
                      .|.+|...|.+...|..|++..+.. -|.|..-+    +-|.+-.+|..|.+    ...|.|.+  |.    .+|.....
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE~-ChICD~v~p~~~QYFK~Y~~Le~HF~----~~hy~ct~qtc~~~k~~vf~~~~e  296 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHEA-CHICDMVGPIRYQYFKSYEDLEAHFR----NAHYCCTFQTCRVGKCYVFPYHTE  296 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhhh-hhhhhccCccchhhhhCHHHHHHHhh----cCceEEEEEEEecCcEEEeccHHH
Confidence            4777887788888888887765542 23443322    23444455555544    23466643  42    46888888


Q ss_pred             HHHHHHHhh
Q psy10762        108 LTNHIRQHT  116 (126)
Q Consensus       108 l~~H~~~h~  116 (126)
                      |..|+..-+
T Consensus       297 l~~h~~~~h  305 (493)
T COG5236         297 LLEHLTRFH  305 (493)
T ss_pred             HHHHHHHHh
Confidence            888865533

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=93.36  E-value=0.034  Score=34.70  Aligned_cols=42  Identities=17%  Similarity=0.612  Sum_probs=22.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhh--cCCCCcccCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQH--TGESPHHCNYCAK   44 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h--~~~~~~~c~~C~~   44 (126)
                      |..|++.|.|..|...... ..--.|+..-  .....|+|.-|+.
T Consensus       136 w~hGGrif~CsfC~~flCE-DDQFEHQAsCQvLe~E~~KC~SCNr  179 (314)
T PF06524_consen  136 WDHGGRIFKCSFCDNFLCE-DDQFEHQASCQVLESETFKCQSCNR  179 (314)
T ss_pred             ccCCCeEEEeecCCCeeec-cchhhhhhhhhhhhccccccccccc
Confidence            5677888888888774433 2333344322  1223466666653

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=93.01  E-value=0.062  Score=29.21  Aligned_cols=12  Identities=25%  Similarity=0.717  Sum_probs=6.1

Q ss_pred             eeccccccccCC
Q psy10762          9 HRCDYCAKTFTR   20 (126)
Q Consensus         9 ~~C~~C~~~f~~   20 (126)
                      ..|+.||..|..
T Consensus        10 R~Cp~CG~kFYD   21 (108)
T PF09538_consen   10 RTCPSCGAKFYD   21 (108)
T ss_pred             ccCCCCcchhcc
Confidence            445555555544

The function of members of this family is unknown.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=92.67  E-value=0.073  Score=22.94  Aligned_cols=10  Identities=20%  Similarity=0.673  Sum_probs=5.6

Q ss_pred             ccCccccccc
Q psy10762         93 HKCTYCMKSF  102 (126)
Q Consensus        93 ~~C~~C~~~f  102 (126)
                      ..|+.|+..|
T Consensus        26 v~C~~C~~~~   35 (38)
T TIGR02098        26 VRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEE
Confidence            4566665554

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=92.60  E-value=0.019  Score=35.17  Aligned_cols=44  Identities=20%  Similarity=0.416  Sum_probs=26.6

Q ss_pred             CcceeccccccccCChhHHHHHHHhh---c-------CCC-----CcccCCcccccCCc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQH---T-------GES-----PHHCNYCAKSFTRK   49 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h---~-------~~~-----~~~c~~C~~~~~~~   49 (126)
                      ++...|+.|+..|..........+.-   .       +..     .+.|+.||.++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            46788999999998875544443221   1       111     24677787776544

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.57  E-value=0.42  Score=25.94  Aligned_cols=26  Identities=19%  Similarity=0.315  Sum_probs=22.6

Q ss_pred             CccC----cccccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKC----TYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C----~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      -|.|    ..|+....+...|++|++.+++
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            4789    8999999999999999988764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=92.38  E-value=0.091  Score=22.20  Aligned_cols=9  Identities=22%  Similarity=0.704  Sum_probs=4.3

Q ss_pred             cccCCCCCc
Q psy10762         65 FPCQYCPKA   73 (126)
Q Consensus        65 ~~C~~C~~~   73 (126)
                      |.|..||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            445555443

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.20  E-value=0.32  Score=26.59  Aligned_cols=86  Identities=20%  Similarity=0.430  Sum_probs=52.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCc------------ccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH------------HCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKA   73 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~------------~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   73 (126)
                      +.|..|+.|+.+.-+...|......-...++|            .|--|...|........  ........|+|+.|...
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~   90 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNV   90 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCCc
Confidence            46788999999887777766553211111111            26667777765421100  00123346999999999


Q ss_pred             CCChhhHHHHHHhhcCCCCccCcccc
Q psy10762         74 FTRKDHLVNHVRRHTGESPHKCTYCM   99 (126)
Q Consensus        74 ~~~~~~l~~h~~~~~~~~~~~C~~C~   99 (126)
                      |-..-+...|...|.      |+-|.
T Consensus        91 FC~dCD~fiHe~Lh~------CPGC~  110 (112)
T TIGR00622        91 FCVDCDVFVHESLHC------CPGCI  110 (112)
T ss_pred             cccccchhhhhhccC------CcCCC
Confidence            988877777766663      66554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.15  E-value=0.043  Score=36.56  Aligned_cols=57  Identities=40%  Similarity=0.746  Sum_probs=28.1

Q ss_pred             cccCCcccccCCchHHHHHHh--hhcCC--CCcccC--CCCCcCCChhhHHHHHHhhcCCCCc
Q psy10762         37 HHCNYCAKSFTRKDHMVYHER--QHTGE--TPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPH   93 (126)
Q Consensus        37 ~~c~~C~~~~~~~~~l~~h~~--~~~~~--~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~   93 (126)
                      +.|..|...+.....+..|..  .|.++  +++.|+  .|++.|.+...+..|...+.+..++
T Consensus       290 ~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         290 IKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             CCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc
Confidence            344445555555555555554  45555  455555  4555555555555555554444433

>KOG2231|consensus

Probab=92.14  E-value=0.22  Score=35.61  Aligned_cols=74  Identities=22%  Similarity=0.495  Sum_probs=46.8

Q ss_pred             cCCcccccCCchHHHHHHhhhcCCCCcccCCC----------CCcCCChhhHHHHHHhhcC-C---CC-ccCcccccccC
Q psy10762         39 CNYCAKSFTRKDHMVYHERQHTGETPFPCQYC----------PKAFTRKDHLVNHVRRHTG-E---SP-HKCTYCMKSFT  103 (126)
Q Consensus        39 c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C----------~~~~~~~~~l~~h~~~~~~-~---~~-~~C~~C~~~f~  103 (126)
                      |..| -.|.....|..|+...+..  +.|..|          .+.| +...|+.|++..-- +   +. -.|+.|...|-
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e~k~Y-t~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fl  193 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKL--HLCSLCLQNLKIFINERKLY-TRAELNLHLMFGDPDDESCRGHPLCKFCHERFL  193 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhh--hccccccccceeeeeeeehe-hHHHHHHHHhcCCCccccccCCccchhhhhhhc
Confidence            3344 3444778899998655442  344443          2333 34567777765321 2   11 35889999999


Q ss_pred             CHHHHHHHHHHhh
Q psy10762        104 RKEHLTNHIRQHT  116 (126)
Q Consensus       104 ~~~~l~~H~~~h~  116 (126)
                      ....|.+|++.++
T Consensus       194 d~~el~rH~~~~h  206 (669)
T KOG2231|consen  194 DDDELYRHLRFDH  206 (669)
T ss_pred             cHHHHHHhhccce
Confidence            9999999998654

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=92.00  E-value=0.14  Score=23.00  Aligned_cols=29  Identities=17%  Similarity=0.361  Sum_probs=17.5

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccC
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFT   47 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~   47 (126)
                      .|.|..||..|...           ...+..|+.||....
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~~~~irC~~CG~rIl   30 (44)
T smart00659        2 IYICGECGRENEIK-----------SKDVVRCRECGYRIL   30 (44)
T ss_pred             EEECCCCCCEeecC-----------CCCceECCCCCceEE
Confidence            36777787766432           223467777776543

present in RNA polymerase I, II and III

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=91.97  E-value=0.17  Score=29.56  Aligned_cols=33  Identities=18%  Similarity=0.302  Sum_probs=23.6

Q ss_pred             CCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccccc
Q psy10762         61 GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSF  102 (126)
Q Consensus        61 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  102 (126)
                      ...-|.||.|+..|+...++.         ..|.|+.||...
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            344588888888887776653         368888888754

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=91.80  E-value=0.05  Score=25.26  Aligned_cols=12  Identities=33%  Similarity=0.808  Sum_probs=7.6

Q ss_pred             eeccccccccCC
Q psy10762          9 HRCDYCAKTFTR   20 (126)
Q Consensus         9 ~~C~~C~~~f~~   20 (126)
                      |.|..|+..|..
T Consensus         6 y~C~~Cg~~fe~   17 (52)
T TIGR02605         6 YRCTACGHRFEV   17 (52)
T ss_pred             EEeCCCCCEeEE
Confidence            667777766643

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=91.76  E-value=0.21  Score=29.15  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=25.0

Q ss_pred             hhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCC
Q psy10762         30 QHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFT   75 (126)
Q Consensus        30 ~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~   75 (126)
                      ...+..-|.|+.|+..|.....+.         ..|.||.||..+.
T Consensus       103 ~e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       103 FETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             hccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            334455688988887777665553         2589999987543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=91.63  E-value=0.18  Score=24.11  Aligned_cols=10  Identities=30%  Similarity=0.687  Sum_probs=5.1

Q ss_pred             CCccCccccc
Q psy10762         91 SPHKCTYCMK  100 (126)
Q Consensus        91 ~~~~C~~C~~  100 (126)
                      .+|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4455555543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.48  E-value=0.18  Score=27.39  Aligned_cols=26  Identities=23%  Similarity=0.496  Sum_probs=22.4

Q ss_pred             Cccc----CCCCCcCCChhhHHHHHHhhcC
Q psy10762         64 PFPC----QYCPKAFTRKDHLVNHVRRHTG   89 (126)
Q Consensus        64 ~~~C----~~C~~~~~~~~~l~~h~~~~~~   89 (126)
                      .|.|    ..|+....+...+.+|++.++|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3789    8999999999999999987653

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.75  E-value=0.61  Score=30.72  Aligned_cols=48  Identities=31%  Similarity=0.566  Sum_probs=25.9

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCCCccCccc----ccccCCHHHHHHHHHH
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC----MKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C----~~~f~~~~~l~~H~~~  114 (126)
                      .|-.|..-|-....|..|.+.-+ ++=|.|..-    ..-|.+..+|.+|.+.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~H-E~ChICD~v~p~~~QYFK~Y~~Le~HF~~  273 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRH-EACHICDMVGPIRYQYFKSYEDLEAHFRN  273 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhh-hhhhhhhccCccchhhhhCHHHHHHHhhc
Confidence            46666666666667767666432 222333221    1336666666666554

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=90.64  E-value=0.21  Score=29.74  Aligned_cols=33  Identities=21%  Similarity=0.461  Sum_probs=23.2

Q ss_pred             CCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccC
Q psy10762         62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFT  103 (126)
Q Consensus        62 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~  103 (126)
                      ..-|.|+.|+..|+...++.         ..|.|+.||....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            34588888888887766542         3688988887643

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=90.42  E-value=0.059  Score=31.24  Aligned_cols=13  Identities=38%  Similarity=0.577  Sum_probs=8.7

Q ss_pred             cccCCCCCcCCCh
Q psy10762         65 FPCQYCPKAFTRK   77 (126)
Q Consensus        65 ~~C~~C~~~~~~~   77 (126)
                      ++|+.||..|...
T Consensus        29 ~~c~~c~~~f~~~   41 (154)
T PRK00464         29 RECLACGKRFTTF   41 (154)
T ss_pred             eeccccCCcceEe
Confidence            6677777766554

>smart00531 TFIIE Transcription initiation factor IIE

Probab=90.17  E-value=0.55  Score=27.05  Aligned_cols=38  Identities=13%  Similarity=0.387  Sum_probs=23.5

Q ss_pred             CCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccccc
Q psy10762         61 GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSF  102 (126)
Q Consensus        61 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  102 (126)
                      ...-|.||.|+..|.....+.. .  . ....|.|+.||...
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~-~--d-~~~~f~Cp~Cg~~l  133 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL-L--D-MDGTFTCPRCGEEL  133 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh-c--C-CCCcEECCCCCCEE
Confidence            3346889999888875443321 0  1 13348899998765

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.14  E-value=0.23  Score=29.18  Aligned_cols=23  Identities=30%  Similarity=0.795  Sum_probs=17.2

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccc
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCM   99 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   99 (126)
                      .|.|++||..+             .++-|-+||+||
T Consensus       134 ~~vC~vCGy~~-------------~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYTH-------------EGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCcc-------------cCCCCCcCCCCC
Confidence            68999997543             346678899997

>KOG4173|consensus

Probab=90.13  E-value=0.14  Score=30.95  Aligned_cols=75  Identities=19%  Similarity=0.538  Sum_probs=53.3

Q ss_pred             ceeccc--cccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhh----------cCCCCcccCC--CCCc
Q psy10762          8 PHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH----------TGETPFPCQY--CPKA   73 (126)
Q Consensus         8 ~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~----------~~~~~~~C~~--C~~~   73 (126)
                      .|.|++  |-..|.....+..|..+-++   -.|.+|...|+....|..|+...          .|..-|+|-+  |+.-
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            366765  66777777777777655443   36899999999988888886532          3445588864  8888


Q ss_pred             CCChhhHHHHHH
Q psy10762         74 FTRKDHLVNHVR   85 (126)
Q Consensus        74 ~~~~~~l~~h~~   85 (126)
                      |.+......|+-
T Consensus       156 FkT~r~RkdH~I  167 (253)
T KOG4173|consen  156 FKTSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhhhHHH
Confidence            888777777764

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=90.05  E-value=0.14  Score=23.20  Aligned_cols=11  Identities=18%  Similarity=0.794  Sum_probs=5.9

Q ss_pred             CcccCCCCCcC
Q psy10762         64 PFPCQYCPKAF   74 (126)
Q Consensus        64 ~~~C~~C~~~~   74 (126)
                      .|.|+.||..+
T Consensus         3 ~y~C~~CG~~~   13 (46)
T PRK00398          3 EYKCARCGREV   13 (46)
T ss_pred             EEECCCCCCEE
Confidence            35566665544

>KOG2186|consensus

Probab=90.04  E-value=0.29  Score=30.64  Aligned_cols=48  Identities=19%  Similarity=0.465  Sum_probs=36.4

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhh
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ   58 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~   58 (126)
                      -|.|..||....-. .+..|+....+ .-|.|-.|+..|.. .++..|...
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            37899999887664 56678877766 56889999999887 667777653

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=89.84  E-value=0.37  Score=28.72  Aligned_cols=35  Identities=23%  Similarity=0.472  Sum_probs=23.5

Q ss_pred             CCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCC
Q psy10762         33 GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTR   76 (126)
Q Consensus        33 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~   76 (126)
                      +..-|.|+.|+..|.....+.         ..|.||.||..+..
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            345688888887776655432         25889999876543

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=89.75  E-value=0.097  Score=22.83  Aligned_cols=11  Identities=45%  Similarity=1.087  Sum_probs=6.7

Q ss_pred             eeccccccccC
Q psy10762          9 HRCDYCAKTFT   19 (126)
Q Consensus         9 ~~C~~C~~~f~   19 (126)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            56666666554

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=89.50  E-value=0.27  Score=27.77  Aligned_cols=26  Identities=27%  Similarity=0.390  Sum_probs=16.6

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      .....|.+||+.|...   .+|++.|++-
T Consensus        70 ~d~i~clecGk~~k~L---krHL~~~~gl   95 (132)
T PF05443_consen   70 PDYIICLECGKKFKTL---KRHLRTHHGL   95 (132)
T ss_dssp             SS-EE-TBT--EESBH---HHHHHHTT-S
T ss_pred             cCeeEEccCCcccchH---HHHHHHccCC
Confidence            3456899999999965   8999998643

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.47  E-value=0.43  Score=21.23  Aligned_cols=24  Identities=29%  Similarity=0.686  Sum_probs=13.3

Q ss_pred             CCCccCcccccccCCH----HHHHHHHH
Q psy10762         90 ESPHKCTYCMKSFTRK----EHLTNHIR  113 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~----~~l~~H~~  113 (126)
                      .....|..|++.+...    +.|.+|++
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            3445677787777654    67777773

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=88.86  E-value=0.26  Score=23.46  Aligned_cols=26  Identities=27%  Similarity=0.666  Sum_probs=12.0

Q ss_pred             hHHHHHHhhcCCCCccCcc----cccccCC
Q psy10762         79 HLVNHVRRHTGESPHKCTY----CMKSFTR  104 (126)
Q Consensus        79 ~l~~h~~~~~~~~~~~C~~----C~~~f~~  104 (126)
                      .|..|+...-..++..|+.    |+..+..
T Consensus        25 ~l~~H~~~~C~~~~v~C~~~~~GC~~~~~~   54 (60)
T PF02176_consen   25 ELDDHLENECPKRPVPCPYSPYGCKERVPR   54 (60)
T ss_dssp             CHHHHHHTTSTTSEEE-SS----S--EEEH
T ss_pred             HHHHHHHccCCCCcEECCCCCCCCCCccch
Confidence            5556666443444555655    6555543

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=88.45  E-value=0.31  Score=27.17  Aligned_cols=31  Identities=16%  Similarity=0.341  Sum_probs=16.0

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCc
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRK   49 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~   49 (126)
                      ...|+.||..|....           ..|..|+.||..|...
T Consensus         9 Kr~Cp~cg~kFYDLn-----------k~p~vcP~cg~~~~~~   39 (129)
T TIGR02300         9 KRICPNTGSKFYDLN-----------RRPAVSPYTGEQFPPE   39 (129)
T ss_pred             cccCCCcCccccccC-----------CCCccCCCcCCccCcc
Confidence            345666666664432           2345566666555443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>smart00614 ZnF_BED BED zinc finger

Probab=87.80  E-value=0.41  Score=22.03  Aligned_cols=20  Identities=45%  Similarity=1.019  Sum_probs=12.1

Q ss_pred             cCcccccccCCH-----HHHHHHHH
Q psy10762         94 KCTYCMKSFTRK-----EHLTNHIR  113 (126)
Q Consensus        94 ~C~~C~~~f~~~-----~~l~~H~~  113 (126)
                      .|..|++.++..     +.|.+|+.
T Consensus        20 ~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       20 KCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EecCCCCEeeeCCCCCcHHHHHHHH
Confidence            466666665443     46777765

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=87.23  E-value=0.73  Score=18.11  Aligned_cols=19  Identities=16%  Similarity=0.704  Sum_probs=11.6

Q ss_pred             cCcccccccCCHHHHHHHHH
Q psy10762         94 KCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        94 ~C~~C~~~f~~~~~l~~H~~  113 (126)
                      .|++|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            577777776 3345556653

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PRK04023 DNA polymerase II large subunit; Validated

Probab=87.03  E-value=0.83  Score=34.42  Aligned_cols=10  Identities=20%  Similarity=0.710  Sum_probs=6.0

Q ss_pred             CccCcccccc
Q psy10762         92 PHKCTYCMKS  101 (126)
Q Consensus        92 ~~~C~~C~~~  101 (126)
                      ++.|+.|+..
T Consensus       663 ~y~CPKCG~E  672 (1121)
T PRK04023        663 EDECEKCGRE  672 (1121)
T ss_pred             CCcCCCCCCC
Confidence            3557777654

>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function

Probab=86.37  E-value=4.8  Score=23.58  Aligned_cols=104  Identities=14%  Similarity=0.244  Sum_probs=50.5

Q ss_pred             cccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCC-cCCChhhHHHHHHhhcCCCC
Q psy10762         14 CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPK-AFTRKDHLVNHVRRHTGESP   92 (126)
Q Consensus        14 C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~-~~~~~~~l~~h~~~~~~~~~   92 (126)
                      |+..+....-|.+-...+.......-..-.......... . ...........||.|.. ++.+...  ...+.+...|+
T Consensus        32 c~Ts~rhSNCLdqfkka~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~L~CPLCRG~V~GWtvv--e~AR~~LN~K~  107 (162)
T PF07800_consen   32 CDTSYRHSNCLDQFKKAYGKSSSSSSQSSSSAPSDSSSS-E-SSESQEQPELACPLCRGEVKGWTVV--EPARRFLNAKK  107 (162)
T ss_pred             cCCccchhHHHHHHHHHhcCCCCccccccccCcCCCccc-c-cccccccccccCccccCceeceEEc--hHHHHHhccCC
Confidence            666777777777777666543321111000000000000 0 01111222457898853 3333211  23455666777


Q ss_pred             ccCcc--cccccCCHHHHHHHHHH-hhhccccC
Q psy10762         93 HKCTY--CMKSFTRKEHLTNHIRQ-HTVRRVND  122 (126)
Q Consensus        93 ~~C~~--C~~~f~~~~~l~~H~~~-h~~~~~~~  122 (126)
                      -.|..  |..+- +...|++|.+. |-..++.+
T Consensus       108 RsC~~e~C~F~G-tY~eLrKHar~~HP~~rP~~  139 (162)
T PF07800_consen  108 RSCSQESCSFSG-TYSELRKHARSEHPSARPSE  139 (162)
T ss_pred             ccCccccccccc-CHHHHHHHHHhhCCCCCCcc
Confidence            77865  55443 35589999777 44444443

The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.

>KOG3408|consensus

Probab=85.97  E-value=0.5  Score=26.13  Aligned_cols=26  Identities=23%  Similarity=0.565  Sum_probs=18.3

Q ss_pred             CCCCccCcccccccCCHHHHHHHHHH
Q psy10762         89 GESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      |...|.|-.|.+-|.....|..|.+.
T Consensus        54 G~GqfyCi~CaRyFi~~~~l~~H~kt   79 (129)
T KOG3408|consen   54 GGGQFYCIECARYFIDAKALKTHFKT   79 (129)
T ss_pred             CCceeehhhhhhhhcchHHHHHHHhc
Confidence            33446677788888877777777665

>smart00440 ZnF_C2C2 C2C2 Zinc finger

Probab=85.65  E-value=0.077  Score=23.32  Aligned_cols=12  Identities=25%  Similarity=0.445  Sum_probs=8.4

Q ss_pred             CccCcccccccC
Q psy10762         92 PHKCTYCMKSFT  103 (126)
Q Consensus        92 ~~~C~~C~~~f~  103 (126)
                      .|.|..|+..|.
T Consensus        28 fy~C~~C~~~w~   39 (40)
T smart00440       28 FYVCTKCGHRWR   39 (40)
T ss_pred             EEEeCCCCCEeC
Confidence            377877877664

Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases.

>PF14353 CpXC: CpXC protein

Probab=85.56  E-value=0.73  Score=25.76  Aligned_cols=16  Identities=31%  Similarity=0.677  Sum_probs=9.4

Q ss_pred             cccCCCCCcCCChhhH
Q psy10762         65 FPCQYCPKAFTRKDHL   80 (126)
Q Consensus        65 ~~C~~C~~~~~~~~~l   80 (126)
                      +.||.||..+.-...+
T Consensus        39 ~~CP~Cg~~~~~~~p~   54 (128)
T PF14353_consen   39 FTCPSCGHKFRLEYPL   54 (128)
T ss_pred             EECCCCCCceecCCCE
Confidence            5677777666544443

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=84.84  E-value=0.41  Score=19.93  Aligned_cols=27  Identities=22%  Similarity=0.522  Sum_probs=13.5

Q ss_pred             eeccccccccCChhHHHHHHHhhcCCCCcccCCccccc
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSF   46 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~   46 (126)
                      |.|..|+..+...           ...+..|+.||...
T Consensus         1 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~RI   27 (32)
T PF03604_consen    1 YICGECGAEVELK-----------PGDPIRCPECGHRI   27 (32)
T ss_dssp             EBESSSSSSE-BS-----------TSSTSSBSSSS-SE
T ss_pred             CCCCcCCCeeEcC-----------CCCcEECCcCCCeE
Confidence            5566777665421           12245677776543

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>COG4957 Predicted transcriptional regulator [Transcription]

Probab=84.16  E-value=0.52  Score=26.59  Aligned_cols=23  Identities=26%  Similarity=0.267  Sum_probs=18.7

Q ss_pred             ccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ..|.++|+.|.   .|.+|+.+|.+-
T Consensus        77 IicLEDGkkfK---SLKRHL~t~~gm   99 (148)
T COG4957          77 IICLEDGKKFK---SLKRHLTTHYGL   99 (148)
T ss_pred             EEEeccCcchH---HHHHHHhcccCC
Confidence            57999999998   578999987753

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=83.53  E-value=0.81  Score=23.79  Aligned_cols=12  Identities=33%  Similarity=0.675  Sum_probs=6.6

Q ss_pred             CccCcccccccC
Q psy10762         92 PHKCTYCMKSFT  103 (126)
Q Consensus        92 ~~~C~~C~~~f~  103 (126)
                      -|.|..|+..|.
T Consensus        53 IW~C~kCg~~fA   64 (89)
T COG1997          53 IWKCRKCGAKFA   64 (89)
T ss_pred             eEEcCCCCCeec
Confidence            455655655553

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=83.31  E-value=0.82  Score=28.15  Aligned_cols=29  Identities=28%  Similarity=0.505  Sum_probs=19.3

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +..|.|+.|+|.|.-..=.++|+..-|.+
T Consensus        75 ~~K~~C~lc~KlFkg~eFV~KHI~nKH~e  103 (214)
T PF04959_consen   75 EDKWRCPLCGKLFKGPEFVRKHIFNKHPE  103 (214)
T ss_dssp             SEEEEE-SSS-EESSHHHHHHHHHHH-HH
T ss_pred             CCEECCCCCCcccCChHHHHHHHhhcCHH
Confidence            44588888888888887788887764443

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=83.17  E-value=0.5  Score=34.41  Aligned_cols=12  Identities=25%  Similarity=0.637  Sum_probs=7.2

Q ss_pred             CCCcccCCCCCc
Q psy10762         62 ETPFPCQYCPKA   73 (126)
Q Consensus        62 ~~~~~C~~C~~~   73 (126)
                      ..|..||.||..
T Consensus       473 ~~p~~Cp~Cgs~  484 (730)
T COG1198         473 PIPQSCPECGSE  484 (730)
T ss_pred             CCCCCCCCCCCC
Confidence            345677777643

>PHA00626 hypothetical protein

Probab=82.10  E-value=0.71  Score=21.83  Aligned_cols=16  Identities=13%  Similarity=0.237  Sum_probs=13.0

Q ss_pred             CCCccCcccccccCCH
Q psy10762         90 ESPHKCTYCMKSFTRK  105 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~  105 (126)
                      ...|.|+.||..|+..
T Consensus        21 snrYkCkdCGY~ft~~   36 (59)
T PHA00626         21 SDDYVCCDCGYNDSKD   36 (59)
T ss_pred             CcceEcCCCCCeechh
Confidence            4679999999998754

>PF08790 zf-LYAR: LYAR-type C2HC zinc finger ; InterPro: IPR014898 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=81.57  E-value=0.41  Score=19.27  Aligned_cols=19  Identities=26%  Similarity=0.592  Sum_probs=11.6

Q ss_pred             eeccccccccCChhHHHHHH
Q psy10762          9 HRCDYCAKTFTRKEHLVNHV   28 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~   28 (126)
                      |.|-+|++.| ....++.|.
T Consensus         1 ~sCiDC~~~F-~~~~y~~Ht   19 (28)
T PF08790_consen    1 FSCIDCSKDF-DGDSYKSHT   19 (28)
T ss_dssp             EEETTTTEEE-EGGGTTT--
T ss_pred             CeeecCCCCc-CcCCcCCCC
Confidence            5688888888 334555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This C2HC zinc finger domain is found in LYAR proteins such as Q08288 from SWISSPROT, which are involved in cell growth regulation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1WJV_A.

>PTZ00448 hypothetical protein; Provisional

Probab=81.44  E-value=1.6  Score=29.06  Aligned_cols=34  Identities=21%  Similarity=0.437  Sum_probs=27.1

Q ss_pred             CccCcccccccCCHHHHHHHHHH--hh---hccccCCCC
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQ--HT---VRRVNDLPP  125 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~--h~---~~~~~~~~p  125 (126)
                      .|.|..|+-.|......+.|++.  |.   .++...+||
T Consensus       314 ~~tC~~C~v~F~~~~~qR~H~KSDwHrYNLKRkl~gLpp  352 (373)
T PTZ00448        314 MLLCRKCNIQLMDHNAFKQHYRSEWHIFNTKRNARKMEP  352 (373)
T ss_pred             CccccccccccCCHHHHHHHhhhhHHHHHHHHHhcCCCC
Confidence            58899999999988888999876  33   566667776

>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues

Probab=81.08  E-value=0.55  Score=19.24  Aligned_cols=8  Identities=25%  Similarity=0.571  Sum_probs=3.9

Q ss_pred             CcccCCcc
Q psy10762         36 PHHCNYCA   43 (126)
Q Consensus        36 ~~~c~~C~   43 (126)
                      .+.|+.|+
T Consensus        19 ~~vCp~C~   26 (30)
T PF08274_consen   19 LLVCPECG   26 (30)
T ss_dssp             SEEETTTT
T ss_pred             EEeCCccc
Confidence            34555554

The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.

>PRK03824 hypA hydrogenase nickel incorporation protein; Provisional

Probab=80.87  E-value=0.71  Score=26.23  Aligned_cols=13  Identities=15%  Similarity=0.626  Sum_probs=7.5

Q ss_pred             ceeccccccccCC
Q psy10762          8 PHRCDYCAKTFTR   20 (126)
Q Consensus         8 ~~~C~~C~~~f~~   20 (126)
                      .+.|..||..|..
T Consensus        70 ~~~C~~CG~~~~~   82 (135)
T PRK03824         70 VLKCRNCGNEWSL   82 (135)
T ss_pred             EEECCCCCCEEec
Confidence            4566666655544

>KOG2482|consensus

Probab=80.86  E-value=2.4  Score=28.06  Aligned_cols=50  Identities=20%  Similarity=0.464  Sum_probs=36.7

Q ss_pred             cccCCCCCcCCChhhHHHHHHhhc---------------------------CCCCccCcccccccCCHHHHHHHHHH
Q psy10762         65 FPCQYCPKAFTRKDHLVNHVRRHT---------------------------GESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        65 ~~C~~C~~~~~~~~~l~~h~~~~~---------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      ..|-.|...+.+...+..|+++-+                           +.+.-.|-.|.-.|-....|..|+.-
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            367888888888888888886532                           01223577788889999999999755

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=80.29  E-value=1.8  Score=27.22  Aligned_cols=13  Identities=15%  Similarity=0.680  Sum_probs=7.8

Q ss_pred             Ccceecccccccc
Q psy10762          6 ETPHRCDYCAKTF   18 (126)
Q Consensus         6 ~~~~~C~~C~~~f   18 (126)
                      .+.|.|..|....
T Consensus       110 drqFaC~~Cd~~W  122 (278)
T PF15135_consen  110 DRQFACSSCDHMW  122 (278)
T ss_pred             ceeeeccccchHH
Confidence            3567777776543

>PF12907 zf-met2: Zinc-binding

Probab=80.27  E-value=1.5  Score=19.26  Aligned_cols=33  Identities=21%  Similarity=0.504  Sum_probs=20.0

Q ss_pred             ccCcccccccC---CHHHHHHHHHH-hhhccccCCCC
Q psy10762         93 HKCTYCMKSFT---RKEHLTNHIRQ-HTVRRVNDLPP  125 (126)
Q Consensus        93 ~~C~~C~~~f~---~~~~l~~H~~~-h~~~~~~~~~p  125 (126)
                      +.|.+|...|.   +...|..|... |......++.|
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~CFP   38 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTFEECFP   38 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHcCC
Confidence            56888886664   45667777654 44433555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	126
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-27
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-19
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-18
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		8e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-18
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		8e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-17
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-17
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-15
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-15
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-14
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-10
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-14
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-14
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-14
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-14
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-14
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-14
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		9e-14
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-09
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-13
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-13
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-11
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		5e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-10
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		3e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-10
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-09
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-09
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		1e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-07
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		5e-06
2el5_A	42	Solution Structure Of The 18th Zf-C2h2 Domain From		1e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		4e-05
2ytb_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-05
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-05
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		1e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2en0_A	42	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eps_A	54	Solution Structure Of The 4th Zinc Finger Domain Of		3e-04
2epy_A	42	Solution Structure Of The 10th C2h2 Type Zinc Finge		4e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-04
2eol_A	42	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2em1_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 80/119 (67%)
Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++C  C K+F+++ +L  H R HTGE P+ C  C KSF++  H+  H+R HTGE
Sbjct: 72  HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131
Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVN 121
            P+ C  C K+F+R+D+L  H R HTGE P+KC  C KSF+R++ L  H R HT ++ +
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS 190

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 8   PHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGET 63
           P  C Y  C K + +  HL  H R+HTGE P+ C++  C + F+R D +  H+R+HTG  
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 64  PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNH 111
           PF C+ C + F+R DHL  H R HTGE P  C +  C K F R + L  H
Sbjct: 66  PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Query: 9  HRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETP 64
          H CDY  C KT+T+  HL  H+R HTGE P+HC++  C   F R D +  H R+HTG  P
Sbjct: 7  HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 66
Query: 65 FPCQYCPKAFTRKDHLVNHVRRH 87
          F CQ C +AF+R DHL  H++RH
Sbjct: 67 FQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 67  CQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTVRR 119
           C Y  C K +T+  HL  H+R HTGE P+ C +  C   F R + LT H R+HT  R
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 65

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Query: 9  HRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETP 64
          H CDY  C KT+T+  HL  H+R HTGE P+HC++  C   F R D +  H R+HTG  P
Sbjct: 6  HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65
Query: 65 FPCQYCPKAFTRKDHLVNHVRRH 87
          F CQ C +AF+R DHL  H++RH
Sbjct: 66 FQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 67  CQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTVRR 119
           C Y  C K +T+  HL  H+R HTGE P+ C +  C   F R + LT H R+HT  R
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 64

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
          E P++C  C K+F++  +L  H R HTGE P+ C  C KSF++   +  H+R HTGE P+
Sbjct: 2  EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 66 PCQYCPKAFTRKDHLVNHVRRH 87
           C  C K+F+R DHL  H R H
Sbjct: 62 KCPECGKSFSRSDHLSRHQRTH 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 54/86 (62%)
Query: 34  ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
           E P+ C  C KSF++  ++  H+R HTGE P+ C  C K+F++   L  H R HTGE P+
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 94  KCTYCMKSFTRKEHLTNHIRQHTVRR 119
           KC  C KSF+R +HL+ H R H  ++
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 9  HRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETP 64
          H CDY  C K +T+  HL  H+R HTGE P+ C +  C   F R D +  H R+HTG  P
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75
Query: 65 FPCQYCPKAFTRKDHLVNHVRRH 87
          F C  C ++F+R DHL  H++RH
Sbjct: 76 FQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 67  CQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
           C Y  C K +T+  HL  H+R HTGE P+KCT+  C   F R + LT H R+HT
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4   TGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT--- 60
           +G +   C  C K F  K +L  H R+HTGE P  C  C K + RK++++ HE ++    
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 61  GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI 112
            E  F C  C + F R+  L  H+  HTGE P+KC+ C + F +K+ L +H+
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 60  TGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
           +G +   C  C K F  K +L  H R+HTGE P +C  C K + RKE+L  H  ++ + R
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 120 VNDL 123
              +
Sbjct: 63  SEQV 66

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F+R + L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F+R D L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F+R + L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 1  ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 61 PFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F+R D L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 57

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 4  TGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          +G +   C+ C K F    HL  H   H+GE P+ C  C   F RKD M YH R H G  
Sbjct: 3  SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 64 --PFPCQYCPKAFTRKDHLVNHVRR-HTGES 91
            P+ CQ C K F+R DHL  H+++ H+G S
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 60  TGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
           +G +   C+ C K F    HL  H   H+GE P+ C  C   F RK+ ++ H+R H
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F+R + L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F+R D L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F+R   L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F+R   L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F+R   L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F+R   L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          PH+C+ C K F+RK+ L  H+R HTG  P+ C  C  +      +  H R H+ E PF C
Sbjct: 8  PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 68 QYCPKAFTRKDHLVNHVRRHTGES 91
          Q CP A      L  H+R HTG+S
Sbjct: 68 QICPYASRNSSQLTVHLRSHTGDS 91

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 64  PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
           P  C+ C K F+RKD L  H+R HTG  P+KC  C  +      L  H+R H+  R
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F+   +L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F+   +L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 6  ETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C  + C + F++   L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
          PF C  C + F R D    H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 62  ETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           E P+ C  + C + F++   L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 39  CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC 98
           C  C KSF R   +  H   H+   P+PCQYC K F +K  +  H   HTGE PHKC  C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 99  MKSFTRKEHLTNHIRQHT 116
            K+F++  +L  H R+HT
Sbjct: 64  GKAFSQSSNLITHSRKHT 81

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 14  CAKTFTRKEHLVNHV-RQHTGESPHHCNYC--------AKSFTRKDHMVYHERQHTGETP 64
           C +TF+    LV HV  +H G    + + C         KSF  K  +V H R HTGE P
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 65  FPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
           FPC +  C K F R ++L  H R HTGE P KC +  C + F        H+  HT
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 39  CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC 98
           C +C + FT+  +++ HER HT E P+ C  C KAF R+DHL +H   H+ E P KC  C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 99  MKSFTRKEHLTNH 111
            K F +   L  H
Sbjct: 80  GKGFCQSRTLAVH 92

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 14  CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY--CP 71
           C K F     +  H+  H G   H C  C K+F     +  H+  HTGE PF C +  C 
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 72  KAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTVRRVN 121
           K F+   +L  HVR HTG+ P+ C +  C K F +  +L +HI  H   + N
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 34  ESPHHC--NYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
           E P+ C    C + F++K ++  H R HTG+ PF C+ C + F+++  L  H+R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 92  PHKCTYCMKSF----TRKEHLTNHIRQ 114
           P  C  C + F    TR  H   H+RQ
Sbjct: 62  PFACDICGRKFATLHTRTRHTKIHLRQ 88

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
          E P+ C  C K+F+R   +V H+R HTGE P+ C  C KAF++   L+NH R HT
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 3   HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHE-R 57
           HTGE PH+C +  C K+++R E+L  H+R HTGE P+ C +  C+K+F+       H+ R
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 58  QHTGETPFPCQY--CPKAFTRKDHLVNHVR 85
            H+ E P+ C+   C K +T    L  HV+
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 42  CAKSFTRKDHMVYH---ERQHTGETPFPCQYCP-----KAFTRKDHLVNHVRRHTGESPH 93
           C++ F  ++ +V+H   E  H     F C +       + F  +  LV H+RRHTGE PH
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH 68
Query: 94  KCTY--CMKSFTRKEHLTNHIRQHT 116
           KCT+  C KS++R E+L  H+R HT
Sbjct: 69  KCTFEGCRKSYSRLENLKTHLRSHT 93

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 66  PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           P + C + F+R D L  H+R HTG+ P +C  CM++F+R +HLT HIR HT
Sbjct: 23  PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 34  ESPHHC--NYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
           E P+ C    C + F++K ++  H R HTG+ PF C+ C + F++   L  H+R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 92  PHKCTYCMKSF----TRKEHLTNHIRQ 114
           P  C  C + F    TR  H   H+RQ
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIHLRQ 88

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 9  HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
          ++CD C K+F+    L  H R HTGE P+ C+ C K+F ++ H++ H R HTG  P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 65  FPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           + C  C K+F+    L  H R HTGE P+KC  C K+F ++ HL  H R HT
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 4  TGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          +G+  + C  C K+FT K     H+  H G  P+ C  C K F  K H+V H + HTG  
Sbjct: 6  SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 64 PFPCQYCPKAFTRKDHLVNHV 84
          P+ C  C K F  +D    HV
Sbjct: 65 PYECNICAKRFMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 36/71 (50%)
Query: 42  CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKS 101
           C KSFT K     H   H G  P+ C  C K F  K HLV H++ HTG  P++C  C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 102 FTRKEHLTNHI 112
           F  ++    H+
Sbjct: 75  FMWRDSFHRHV 85

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
          + P++CD C  +F  K +L +H   HTGE P+ CN C   F R  ++  H R H+GE P
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 62  ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           + P+ C  C  +F  K +L +H   HTGE P++C  C   F R  +L  H R H+
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS 69

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 39 CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTG 89
          C  C ++F R++H+  H R HT E P+PC  C +AFTR+D L+ H ++ H+G
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYH-ERQHTGETPFP 66
          P +C  C + F+R +HL  H+R HTGE P  C+ C + F R D    H + QH    P  
Sbjct: 3  PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPIL 60
Query: 67 CQYCPKAFTRKDHLVNHVRR 86
               +  ++  HL N V R
Sbjct: 61 EDKVEELLSKNYHLENEVAR 80

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 64  PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH 111
           PF C+ C + F+R DHL  H+R HTGE P  C  C + F R +    H
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 33  GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
           G   + C  C +S+     +  H   H+ E  +PC+YC K F   ++   H   HTGE  
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR 78
Query: 93  HKCTYCMKSFTRKEHLTNHIR 113
           ++C  C KSF   + +++HI+
Sbjct: 79  YQCLACGKSFINYQFMSSHIK 99

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 33 GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH 87
          G S   C+YC K F    ++  H R HTGE P+ C++C  A  +K  L  H+ RH
Sbjct: 1  GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 42  CAKSFTRKDHMVYHERQHTGETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTY-- 97
           C  ++ +   +  H  +HTGE PFPC  + C K FT   HL  H   HTGE    C    
Sbjct: 11  CGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 70
Query: 98  CMKSFTRKEHLTNHI-RQHTVR 118
           C   FT K ++  H  R H ++
Sbjct: 71  CDLRFTTKANMKKHFNRFHNIK 92

>pdb|2EL5|A Chain A, Solution Structure Of The 18th Zf-C2h2 Domain From Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 60 TGETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
          +GE P+ C  C KAF RKD L++H R H GES
Sbjct: 6  SGENPYECSECGKAFNRKDQLISHQRTHAGES 37

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 3   HTGETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYH-ER 57
           HTGE P  C  + C K FT   HL  H   HTGE    C+   C   FT K +M  H  R
Sbjct: 37  HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR 96
Query: 58  QHTGET-PFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHI 112
            H  +   + C +  C KAF + + L  H   HT + P++C +  C K F+    L  H 
Sbjct: 97  FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156
Query: 113 RQHT 116
           + H 
Sbjct: 157 KVHA 160

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 42 CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRH 87
          C K++ +  H+  H R HTGE PF C +  C + F R D L  H R H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2YTB|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 5 In Zinc Finger Protein 32 Length = 42

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESP 36
          E P+RCD C K F++K  L+ H+R HTG  P
Sbjct: 9  EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
          E PH CN C KSF +  H++ H+R HTGE P
Sbjct: 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          +GE P+ C  C K+F RK H + HER HTGE+
Sbjct: 6  SGEKPYVCTECGKAFIRKSHFITHERIHTGES 37

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESP 36
          E P++C+ C K FT+  HL NH R HTGE P
Sbjct: 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
          E P+ C  C K FT+  HL NH R HTGE P
Sbjct: 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          +GE P+ CN C K F+ K +++ H+R HTGE
Sbjct: 6  SGEKPYGCNECGKDFSSKSYLIVHQRIHTGE 36

>pdb|2EN0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 385- 413) Of Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          +G+ P+ CN C K+F  K  ++ HER HTGE+
Sbjct: 6  SGQKPYVCNECGKAFGLKSQLIIHERIHTGES 37

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
          E P+ C+ C KAFT+K HL  H + HTGE P
Sbjct: 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|2EPS|A Chain A, Solution Structure Of The 4th Zinc Finger Domain Of Zinc Finger Protein 278 Length = 54

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRR-HTGESPHKC 95
          P+ CQ C K F+R DHL  H+++ HT E PHKC
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 44

>pdb|2EPY|A Chain A, Solution Structure Of The 10th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          +GE  H CN C K+F+ K  ++ H+R HTGE+
Sbjct: 6  SGEKLHECNNCGKAFSFKSQLIIHQRIHTGES 37

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESP 36
          E P+ CDYC K F     LV H R HTGE P
Sbjct: 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESP 36
          E P++C+ C K FT+  HL NH R HTG  P
Sbjct: 10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
          E PF C+ C KAF +  HL +H+R HTGE P
Sbjct: 10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHH------CNYCAKSFTRKDHMVYHE 56
          HTGE P+ C +C KTF +K+ L  H +++    P+       C+ C K+FTR++ M  H 
Sbjct: 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRY--HDPNFVPAAFVCSKCGKTFTRRNTMARHA 67
Query: 57 RQHTG 61
              G
Sbjct: 68 DNCAG 72

>pdb|2EOL|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 581- 609) Of Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          +GE P+ C  C K+F  K  ++ H+R HTGE+
Sbjct: 6  SGEKPYECTDCGKAFGLKSQLIIHQRTHTGES 37

>pdb|2EM1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 637- 667) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
          +GE P+ CN C K+FT K  ++ H+  HTG  P
Sbjct: 6  SGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKP 38

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
          E P+ CN C KSF +K H+  H R HTGE P
Sbjct: 10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
          E P+ C  C KAF+ K +L+ H+R H+GE P
Sbjct: 10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	126
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-40
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-40
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-40
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-30
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-39
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-36
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-26
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-35
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-26
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-25
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-34
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-29
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-33
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-28
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-25
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-33
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-31
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-32
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-31
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-30
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-27
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-26
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-26
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-26
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-19
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-26
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-22
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-19
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-21
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-19
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-17
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-14
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	8e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  132 bits (335), Expect = 1e-40
 Identities = 55/114 (48%), Positives = 76/114 (66%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++C  C K+F+ K+ L  H R HTGE P+ C  C KSF+++ ++  H+R HTGE
Sbjct: 44  HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P+ C  C K+F++  HL  H R HTGE P+KC  C KSF+R+++L  H R HT
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT 157

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  131 bits (333), Expect = 3e-40
 Identities = 53/114 (46%), Positives = 70/114 (61%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             GE P+ C  C K+F+R +HL  H R HTGE P+ C  C KSF+ K  +  H+R HTGE
Sbjct: 16  EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE 75

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P+ C  C K+F+++ +L  H R HTGE P+ C  C KSF++  HL  H R HT
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  131 bits (332), Expect = 4e-40
 Identities = 56/114 (49%), Positives = 77/114 (67%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P++C  C K+F+++ +L  H R HTGE P+ C  C KSF++  H+  H+R HTGE
Sbjct: 72  HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P+ C  C K+F+R+D+L  H R HTGE P+KC  C KSF+R++ L  H R HT
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  114 bits (287), Expect = 2e-33
 Identities = 43/100 (43%), Positives = 56/100 (56%)

Query: 17  TFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTR 76
           +       V       GE P+ C  C KSF+R DH+  H+R HTGE P+ C  C K+F+ 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 77  KDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           K  L  H R HTGE P+KC  C KSF+++ +L  H R HT
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHT 101

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  105 bits (265), Expect = 5e-30
 Identities = 44/90 (48%), Positives = 59/90 (65%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           HTGE P+ C  C K+F++  HL  H R HTGE P+ C  C KSF+R+D++  H+R HTGE
Sbjct: 100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
            P+ C  C K+F+R+D L  H R HTG+  
Sbjct: 160 KPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  128 bits (323), Expect = 1e-39
 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ---H 59
            +G +   C  C K F  K +L  H R+HTGE P  C  C K + RK++++ HE +   +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 60  TGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH-IRQHT 116
             E  F C  C + F R+  L  H+  HTGE P+KC+ C + F +K+ L +H I+ H+
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 70.2 bits (173), Expect = 5e-17
 Identities = 22/59 (37%), Positives = 32/59 (54%)

Query: 59  HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
            +G +   C  C K F  K +L  H R+HTGE P +C  C K + RKE+L  H  ++ +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  117 bits (297), Expect = 8e-36
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
            +G+  + C  C K+FT K     H+  H G  P+ C  C K F  K H+V H + HTG 
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN 110
            P+ C  C K F  +D    H    +    ++     ++ T     ++
Sbjct: 64  KPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 92.5 bits (231), Expect = 8e-26
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 29  RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
              +G+  + C  C KSFT K     H   H G  P+ C  C K F  K HLV H++ HT
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 89  GESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           G  P++C  C K F  ++    H    +
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTS 87

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.4 bits (184), Expect = 9e-19
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 56  ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
               +G+  +PCQ C K+FT K     H+  H G  P+ C  C K F  K HL  H++ H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 116 T 116
           T
Sbjct: 61  T 61

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  116 bits (294), Expect = 3e-35
 Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 6/118 (5%)

Query: 4   TGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQH 59
           + + P  C Y  C K + +  HL  H R+HTGE P+ C++  C + F+R D +  H+R+H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 60  TGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQH 115
           TG  PF C+ C + F+R DHL  H R HTGE P  C +  C K F R + L  H   H
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 92.6 bits (231), Expect = 9e-26
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 32  TGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRH 87
           + + P  C Y  C K + +  H+  H R+HTGE P+ C +  C + F+R D L  H RRH
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 88  TGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           TG  P +C  C + F+R +HL  H R HT
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 92.2 bits (230), Expect = 1e-25
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 3   HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
           HTGE P++CD+  C + F+R + L  H R+HTG  P  C  C + F+R DH+  H R HT
Sbjct: 31  HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90

Query: 61  GETPFPCQY--CPKAFTRKDHLVNHVRRH 87
           GE PF C++  C K F R D LV H   H
Sbjct: 91  GEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  112 bits (283), Expect = 7e-34
 Identities = 35/93 (37%), Positives = 46/93 (49%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
               PH+C+ C K F+RK+ L  H+R HTG  P+ C  C  +      +  H R H+ E
Sbjct: 3  SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
           PF CQ CP A      L  H+R HTG+S    
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  101 bits (255), Expect = 1e-29
 Identities = 33/86 (38%), Positives = 41/86 (47%)

Query: 31  HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
                PH C  C K F+RKD +  H R HTG  P+ C+ C  A      L  H+R H+ E
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 91  SPHKCTYCMKSFTRKEHLTNHIRQHT 116
            P KC  C  +      LT H+R HT
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHT 88

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  113 bits (285), Expect = 2e-33
 Identities = 43/127 (33%), Positives = 53/127 (41%), Gaps = 13/127 (10%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHH---------CNYCAKSFTRKDHMV 53
              +       C +TF+    LV HV       P           C    KSF  K  +V
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 54  YHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLT 109
            H R HTGE PFPC +  C K F R ++L  H R HTGE P KC +  C + F       
Sbjct: 80  NHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK 139

Query: 110 NHIRQHT 116
            H+  HT
Sbjct: 140 KHMHVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  100 bits (250), Expect = 2e-28
 Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 14  CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF-------- 65
              +    +  ++       +       C ++F+    +V H        P         
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 66  -PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
             C    K+F  K  LVNH+R HTGE P  C +  C K F R E+L  H R HT
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 116

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 91.6 bits (228), Expect = 5e-25
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 13/107 (12%)

Query: 3   HTGETPHR---------CDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDH 51
                P +         C    K+F  K  LVNH+R HTGE P  C +  C K F R ++
Sbjct: 48  EHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSEN 107

Query: 52  MVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCT 96
           +  H+R HTGE PF C++  C + F        H+  HT +     +
Sbjct: 108 LKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 5/48 (10%), Positives = 13/48 (27%)

Query: 70  CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
              +       ++       +       C ++F+    L  H+    V
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV 50

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  110 bits (278), Expect = 5e-33
 Identities = 32/94 (34%), Positives = 45/94 (47%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
              +    C +C + FT+  +L+ H R HT E P+ C+ C K+F R+DH+  H   H+ E
Sbjct: 12  SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE 71

Query: 63  TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
            PF CQ C K F +   L  H   H   S     
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  105 bits (266), Expect = 4e-31
 Identities = 32/94 (34%), Positives = 44/94 (46%)

Query: 23  HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
                      +    C +C + FT+  +++ HER HT E P+ C  C KAF R+DHL +
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           H   H+ E P KC  C K F +   L  H   H 
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  109 bits (275), Expect = 6e-32
 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 12/126 (9%)

Query: 3   HTGETPHRCDYC-----AKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYH 55
           H       C +       + F  +  LV H+R+HTGE PH C +  C KS++R +++  H
Sbjct: 29  HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTH 88

Query: 56  ERQHTGETPFPCQY--CPKAFTRKDHLVNHVRR-HTGESPHKCTY--CMKSFTRKEHLTN 110
            R HTGE P+ C++  C KAF+       H  R H+ E P+ C    C K +T    L  
Sbjct: 89  LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

Query: 111 HIRQHT 116
           H++   
Sbjct: 149 HVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  101 bits (254), Expect = 8e-29
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 13/124 (10%)

Query: 6   ETPHRCDYCAKTFTRKEHLVNHVRQ---HTGESPHHCNYC-----AKSFTRKDHMVYHER 57
           ET  R D C++ F  +E LV+H+     H       C++       + F  +  +V H R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 58  QHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNH-I 112
           +HTGE P  C +  C K+++R ++L  H+R HTGE P+ C +  C K+F+       H  
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 113 RQHT 116
           R H+
Sbjct: 121 RTHS 124

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 82.6 bits (205), Expect = 2e-21
 Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 7/94 (7%)

Query: 3   HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYH-ER 57
           HTGE PH+C +  C K+++R E+L  H+R HTGE P+ C +  C+K+F+       H  R
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121

Query: 58  QHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTG 89
            H+ E P+ C+   C K +T    L  HV+   G
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  109 bits (276), Expect = 9e-32
 Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 10/124 (8%)

Query: 3   HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
                 + C +  C   + +   L  H+ +HTGE P  C    C K FT   H+  H   
Sbjct: 7   PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT 66

Query: 59  HTGETPFPC--QYCPKAFTRKDHLVNHVRRHTGE--SPHKCTY--CMKSFTRKEHLTNHI 112
           HTGE  F C    C   FT K ++  H  R        + C +  C K+F +   L  H 
Sbjct: 67  HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126

Query: 113 RQHT 116
             HT
Sbjct: 127 FSHT 130

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  108 bits (271), Expect = 6e-31
 Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 10/124 (8%)

Query: 3   HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHERQ 58
           HTGE P  C    C K FT   HL  H   HTGE    C+   C   FT K +M  H  +
Sbjct: 37  HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR 96

Query: 59  HTGE--TPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCT--YCMKSFTRKEHLTNHI 112
                   + C +  C KAF + + L  H   HT + P++C    C K F+    L  H 
Sbjct: 97  FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156

Query: 113 RQHT 116
           + H 
Sbjct: 157 KVHA 160

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 95.4 bits (238), Expect = 5e-26
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 3   HTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGE--SPHHCNY--CAKSFTRKDHMVYHE 56
           HTGE    CD   C   FT K ++  H  +        + C++  C K+F + + +  H+
Sbjct: 67  HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126

Query: 57  RQHTGETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
             HT + P+ C  + C K F+    L  H + H G    K   C            H+ +
Sbjct: 127 FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 92.7 bits (231), Expect = 5e-25
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 25  VNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHL 80
           +           + C++  C  ++ +   +  H  +HTGE PFPC+   C K FT   HL
Sbjct: 1   MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60

Query: 81  VNHVRRHTGESPHKCT--YCMKSFTRKEHLTNHIRQHT 116
             H   HTGE    C    C   FT K ++  H  +  
Sbjct: 61  TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  105 bits (264), Expect = 1e-30
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 6   ETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
                C +  C K F     +  H+  H G   H C  C K+F     +  H+  HTGE 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 64  PFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
           PF C +  C K F+   +L  HVR HTG+ P+ C +  C K F +  +L +HI  H 
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 93.0 bits (232), Expect = 8e-26
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 5   GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGE 62
           G   H C  C K F     L  H   HTGE P  C +  C K F+   ++  H R HTG+
Sbjct: 31  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90

Query: 63  TPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHK 94
            P+ C +  C K F +  +L +H+  H     ++
Sbjct: 91  RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.2 bits (165), Expect = 1e-15
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 3   HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
           HTGE P +C +  C K F+   +L  HVR HTG+ P+ C +  C K F +  ++  H   
Sbjct: 57  HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 116

Query: 59  HTGETPF 65
           H      
Sbjct: 117 HAKAKNN 123

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  101 bits (255), Expect = 1e-29
 Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           +G +   C+ C K F    HL  H   H+GE P+ C  C   F RKD M YH R H G 
Sbjct: 2  SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 63 T--PFPCQYCPKAFTRKDHLVNHVRR-HTGE 90
             P+ CQ C K F+R DHL  H+++ H+G 
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 96.8 bits (242), Expect = 1e-27
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 31  HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
            +G S   C  C K F    H+  H+  H+GE P+ C  C   F RKD +  HVR H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 91  S--PHKCTYCMKSFTRKEHLTNHIRQ-HT 116
              P+ C  C K F+R +HL  HI+Q H+
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 94.1 bits (235), Expect = 1e-26
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHT 60
           T         C KT+T+  HL  H+R HTGE P+HC++  C   F R D +  H R+HT
Sbjct: 2  RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 61 GETPFPCQYCPKAFTRKDHLVNHVRRH 87
          G  PF CQ C +AF+R DHL  H++RH
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 92.2 bits (230), Expect = 6e-26
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 30  QHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRH 87
           + T         C K++T+  H+  H R HTGE P+ C +  C   F R D L  H R+H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 88  TGESPHKCTYCMKSFTRKEHLTNHIRQH 115
           TG  P +C  C ++F+R +HL  H+++H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 63.7 bits (156), Expect = 7e-15
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 2  WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
           HTGE P+ CD+  C   F R + L  H R+HTG  P  C  C ++F+R DH+  H ++H
Sbjct: 29 THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 62.5 bits (153), Expect = 2e-14
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 58  QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQH 115
           + T         C K +T+  HL  H+R HTGE P+ C +  C   F R + LT H R+H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 116 T 116
           T
Sbjct: 61  T 61

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.5 bits (231), Expect = 3e-26
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 6  ETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
          E P+ C    C + F++   L  H+R HTG+ P  C  C ++F+R DH+  H R HTGE 
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
          PF C  C + F R D    H + H  +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 89.8 bits (224), Expect = 5e-25
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 34  ESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
           E P+ C    C + F++   +  H R HTG+ PF C+ C + F+R DHL  H+R HTGE 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 92  PHKCTYCMKSFTRKEHLTNHIRQHT 116
           P  C  C + F R +    H + H 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.0 bits (183), Expect = 8e-19
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          HTG+ P +C  C + F+R +HL  H+R HTGE P  C+ C + F R D    H + H  +
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 91.9 bits (229), Expect = 9e-26
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 17  TFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC--QYCPKAF 74
           +       +   R H  + P     C K +T+  H+  H R HTGE P+ C  + C   F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 75  TRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            R D L  H R+HTG  P +C  C +SF+R +HL  H+++H 
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 90.0 bits (224), Expect = 6e-25
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 3  HTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
                H CD   C K +T+  HL  H+R HTGE P+ C +  C   F R D +  H R+
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
          HTG  PF C  C ++F+R DHL  H++RH 
Sbjct: 70 HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.0 bits (159), Expect = 3e-15
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 2  WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
           HTGE P++C +  C   F R + L  H R+HTG  P  C  C +SF+R DH+  H ++H
Sbjct: 39 THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

Query: 60 T 60
           
Sbjct: 99 Q 99

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 91.0 bits (227), Expect = 2e-25
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 23  HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET----PFPCQYCPKAFTRKD 78
              +  R HTGE P+ C++C K+F +K  +  H +++         F C  C K FTR++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 79  HLVNHVRRHTGESPHKCTYCMKSF 102
            +  H     G    +      S 
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 84.5 bits (210), Expect = 5e-23
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES----PHHCNYCAKSFTRKDHMVYHERQ 58
          HTGE P+ C +C KTF +K+ L  H +++   +       C+ C K+FTR++ M  H   
Sbjct: 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN 69

Query: 59 HTGETPFPCQYCPKAF 74
            G      +    + 
Sbjct: 70 CAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 75.6 bits (187), Expect = 2e-19
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 51  HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES----PHKCTYCMKSFTRKE 106
                 R HTGE P+ C +C K F +K  L  H +R+   +       C+ C K+FTR+ 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 107 HLTNHIRQHT 116
            +  H     
Sbjct: 62  TMARHADNCA 71

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 90.6 bits (226), Expect = 2e-25
 Identities = 34/78 (43%), Positives = 44/78 (56%)

Query: 39  CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC 98
           C  C KSF R   +  H   H+   P+PCQYC K F +K  +  H   HTGE PHKC  C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 99  MKSFTRKEHLTNHIRQHT 116
            K+F++  +L  H R+HT
Sbjct: 64  GKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 90.2 bits (225), Expect = 3e-25
 Identities = 34/79 (43%), Positives = 44/79 (55%)

Query: 11 CDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC 70
          C  C K+F R   L  H+  H+   P+ C YC K F +K  M  H   HTGE P  CQ C
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 71 PKAFTRKDHLVNHVRRHTG 89
           KAF++  +L+ H R+HTG
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 71.7 bits (177), Expect = 6e-18
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTG 61
          H+   P+ C YC K F +K  +  H   HTGE PH C  C K+F++  +++ H R+HTG
Sbjct: 24 HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 86.0 bits (214), Expect = 1e-23
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          P +C  C + F+R +HL  H+R HTGE P  C+ C + F R D    H        P   
Sbjct: 3  PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61

Query: 68 QYCPKAFTRKDHLVNHV---RRHTGE 90
              +  ++  HL N V   ++  GE
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 83.3 bits (207), Expect = 2e-22
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 36  PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
           P  C  C ++F+R DH+  H R HTGE PF C  C + F R D    H        P   
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61

Query: 96  TYCMKSFTRKEHLTNHI---RQHT 116
               +  ++  HL N +   ++  
Sbjct: 62  DKVEELLSKNYHLENEVARLKKLV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.2 bits (147), Expect = 2e-13
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHM---VYHERQH 59
          HTGE P  CD C + F R +    H        P   +   +  ++  H+   V   ++ 
Sbjct: 26 HTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84

Query: 60 TGE 62
           GE
Sbjct: 85 VGE 87

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 83.3 bits (207), Expect = 1e-22
 Identities = 26/72 (36%), Positives = 34/72 (47%)

Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
                 Q      + C+ C KSF+    +  H R HTGE P+ C  C KAF ++ HL+ 
Sbjct: 5  SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 83 HVRRHTGESPHK 94
          H R HTG  P  
Sbjct: 65 HHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 75.6 bits (187), Expect = 1e-19
 Identities = 25/66 (37%), Positives = 32/66 (48%)

Query: 51  HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN 110
                E Q      + C  C K+F+    L  H R HTGE P+KC  C K+F ++ HL  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 111 HIRQHT 116
           H R HT
Sbjct: 65  HHRVHT 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 75.6 bits (187), Expect = 2e-19
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
                ++CD C K+F+    L  H R HTGE P+ C+ C K+F ++ H++ H R HTG 
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72

Query: 63 TPF 65
           P 
Sbjct: 73 GPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.4 bits (202), Expect = 7e-22
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET--PFPCQYCPKAFTRKDHL 80
             +  R H+GE P+ C  C   FT+   M  H  Q   E    F C +C     RK  L
Sbjct: 2  SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 81 VNHVRR-HTGESPH 93
            H+R+ H+   P 
Sbjct: 62 GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.3 bits (181), Expect = 9e-19
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 51  HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES--PHKCTYCMKSFTRKEHL 108
                 R H+GE P+ C  C   FT+   +  H+ +   E+     C +C     RK  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 109 TNHIR-QHT 116
             H+R QH+
Sbjct: 62  GVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 71.8 bits (177), Expect = 4e-18
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES--PHHCNYCAKSFTRKDHMVYHER-QH 59
          H+GE P+ C  C   FT+   +  H+ Q   E+    HC +C     RK  +  H R QH
Sbjct: 10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

Query: 60 TGETPF 65
          +   P 
Sbjct: 70 SYSGPS 75

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.2 bits (199), Expect = 2e-21
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query: 24 LVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNH 83
                 H+GE P+ C  C K+F+R   +V H+R HTGE P+ C  C KAF++   L+NH
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 84 VRRHTGESPH 93
           R HT     
Sbjct: 62 QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 75.6 bits (187), Expect = 1e-19
 Identities = 26/63 (41%), Positives = 36/63 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          H+GE P+ C  C K F+R   LV H R HTGE P+ C  C K+F++   ++ H+R HT  
Sbjct: 9  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68

Query: 63 TPF 65
             
Sbjct: 69 PSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 74.4 bits (184), Expect = 3e-19
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 55  HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
               H+GE P+ C  C KAF+R   LV H R HTGE P+KC  C K+F++   L NH R 
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Query: 115 HT 116
           HT
Sbjct: 65  HT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 80  LVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                  H+GE P+ C  C K+F+R   L  H R HT
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHT 38

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 78.6 bits (195), Expect = 7e-21
 Identities = 25/71 (35%), Positives = 36/71 (50%)

Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
          H  +H      + P+ C+ C  SF  K ++  H+  HTGE P+ C  C   F R  +L  
Sbjct: 4  HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 83 HVRRHTGESPH 93
          H R H+GE P+
Sbjct: 64 HTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 74.4 bits (184), Expect = 4e-19
 Identities = 22/66 (33%), Positives = 32/66 (48%)

Query: 51  HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN 110
           H  +H      + P+ C  C  +F  K +L +H   HTGE P++C  C   F R  +L  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 111 HIRQHT 116
           H R H+
Sbjct: 64  HTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 74.0 bits (183), Expect = 6e-19
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             + P++CD C  +F  K +L +H   HTGE P+ CN C   F R  ++  H R H+GE
Sbjct: 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

Query: 63 TPF 65
           P+
Sbjct: 72 KPY 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 78.7 bits (195), Expect = 9e-21
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 31  HTGESPHHCNY--CAKSFTRKDHMVYHER-QHTGETPFPCQY--CPKAFTRKDHLVNHVR 85
            +G S   C++  C + F+ + ++ +H++ QH  +  F C    C K+F  K HL  H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 86  RHTGESPHKCTYCMKSF 102
            H+    + C +   S 
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 78.0 bits (193), Expect = 1e-20
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 3  HTGETPHRCDY--CAKTFTRKEHLVNHVR-QHTGESPHHCNY--CAKSFTRKDHMVYHER 57
           +G +   CD+  C + F+ +++L +H + QH  +    C    C KSF  K H+  H +
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 58 QHTGETPFPCQYCPKAF 74
           H+    + C++   + 
Sbjct: 62 LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 65.3 bits (160), Expect = 2e-15
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 59  HTGETPFPCQY--CPKAFTRKDHLVNHVR-RHTGESPHKCTY--CMKSFTRKEHLTNHIR 113
            +G +  PC +  C + F+ + +L +H + +H  +    C    C KSF  K+HL  H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 114 QHT 116
            H+
Sbjct: 62  LHS 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 75.6 bits (187), Expect = 1e-19
 Identities = 16/65 (24%), Positives = 29/65 (44%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           +   P +C  C+ + + K  L  H R H  + P  CNYC+    +  ++  H ++  G+
Sbjct: 4  GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

Query: 63 TPFPC 67
             P 
Sbjct: 64 MSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.1 bits (183), Expect = 5e-19
 Identities = 15/60 (25%), Positives = 25/60 (41%)

Query: 57  RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              +   P  C  C  + + K  L  H R H  + P KC YC     +  +L+ H+++  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.1 bits (183), Expect = 5e-19
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
             +   P  C+ C+ S + K  +  HER H  + PF C YC     +  +L  H+++  
Sbjct: 2  SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 89 GE 90
          G+
Sbjct: 62 GD 63

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 72.3 bits (178), Expect = 3e-18
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 9  HRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETP 64
          + C +  C K F +   L  H   HT + P+ C +  C K F+    +  HE+ H G   
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 65 FPCQYCPKAFTRKDHLVNHVRR 86
               C          + HV  
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 71.1 bits (175), Expect = 1e-17
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 37  HHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESP 92
           + C++  C K+F + + +  H+  HT + P+ C +  C K F+    L  H + H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 93  HKCTYCMKSFTRKEHLTNHIR 113
            K   C            H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 66  PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
             + C KAF + + L  H   HT + P++C +  C K F+    L  H + H 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 3  HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHER 57
          HT + P+ C +  C K F+    L  H + H G      + C+         + H  
Sbjct: 26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.5 bits (173), Expect = 1e-17
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 3/73 (4%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHT---GESPHHCNYCAKSFTRKDHMVYHERQH 59
           +G +  +C+ C  T  +K  L  H R+H          C +C K F + D +  H  + 
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 60 TGETPFPCQYCPK 72
                  Q    
Sbjct: 62 HPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 69.0 bits (169), Expect = 6e-17
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHT---GETPFPCQYCPKAFTRKDHLVNHVRRH 87
           +G S   C  C  +  +K  + +H+R+H        FPC++C K F + D +  H  + 
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 88 TGESPHKC 95
                  
Sbjct: 62 HPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 66.7 bits (163), Expect = 5e-16
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 59  HTGETPFPCQYCPKAFTRKDHLVNHVRRHT---GESPHKCTYCMKSFTRKEHLTNHIRQH 115
            +G +   C+ C     +K  L  H R+H          C +C K F + + +  H  + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 1e-06
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 87  HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
            +G S  +C  C  +  +K  L  H R+H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV 34

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.1 bits (170), Expect = 3e-17
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVR--QHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
            GE  +RC  C++ +T   +   H           + C +C K FTRKD+M  H +   
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 61 G 61
           
Sbjct: 65 K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 68.7 bits (169), Expect = 5e-17
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 56  ERQHTGETPFPCQYCPKAFTRKDHLVNHVR--RHTGESPHKCTYCMKSFTRKEHLTNHIR 113
           E    GE  + C+ C + +T   +   H           + C +C K FTRK+++T H++
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 114 QHT 116
              
Sbjct: 62  IIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 68.7 bits (169), Expect = 5e-17
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHER--QHTGETPFPCQYCPKAFTRKDHLVNHVRR 86
              GE  + C  C++ +T   +   H           +PC +C K FTRKD++  HV+ 
Sbjct: 3  FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 87 HTG 89
             
Sbjct: 63 IHK 65

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 68.7 bits (169), Expect = 4e-17
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGE 90
             C  C ++F R++H+  H R HT E P+PC  C +AFTR+D L+ H ++ H+G 
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 68.3 bits (168), Expect = 7e-17
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHE-RQHTGET 63
             C+ C + F R+EHL  H R HT E P+ C  C ++FTR+D ++ H  + H+G  
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 62.5 bits (153), Expect = 1e-14
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 64  PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI-RQHT 116
            F C+ C +AF R++HL  H R HT E P+ C  C ++FTR++ L  H  + H+
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHV-RQHTGE 34
          HT E P+ C  C + FTR++ L+ H  + H+G 
Sbjct: 25 HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 65.8 bits (161), Expect = 7e-16
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 18 FTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFT 75
               +L+N+V       P+ C    C + F+R D +  H R HTG+ PF C+ C + F+
Sbjct: 3  PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 76 RKDHLVNHVRRHT 88
          R DHL  H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 65.4 bits (160), Expect = 1e-15
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 55  HERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI 112
                    P+ C    C + F+R D L  H+R HTG+ P +C  CM++F+R +HLT HI
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 113 RQHT 116
           R HT
Sbjct: 70  RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 58.5 bits (142), Expect = 5e-13
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 3  HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
               P+ C    C + F+R + L  H+R HTG+ P  C  C ++F+R DH+  H R HT
Sbjct: 14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 60.7 bits (148), Expect = 6e-14
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 55  HERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHKCTYCMKSFT 103
                +   P+ CQ C K F+R DHL  H+++ HT E PHKC   +   +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCNYCAKSFT 47
           +   P+ C  C K F+R +HL  H++Q HT E PH C       +
Sbjct: 7  GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.7 bits (135), Expect = 4e-12
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ-HTGETPFPCQYCPKAFT 75
          +     +   P+ C  C K F+R DH+  H +Q HT E P  CQ      +
Sbjct: 2  SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ-HT 116
           +     +   P+ C  C K F+R +HL  HI+Q HT
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.6 bits (141), Expect = 2e-12
 Identities = 17/103 (16%), Positives = 32/103 (31%), Gaps = 5/103 (4%)

Query: 19  TRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYH-----ERQHTGETPFPCQYCPKA 73
           +       +    TG S   C  C+ ++     +  H       +              +
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 74  FTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
             RK  L+    +   +   KC YC  SF   + L+ H+ +  
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.8 bits (131), Expect = 5e-11
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVR--QHTGESPHHCNYC---AKSFTRKDHMVYHER 57
            TG +  RC  C+  +     L  H+    H  +  H  +       S  RK  ++  E 
Sbjct: 14  FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG 73

Query: 58  QHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
           +   +    C YC  +F     L  H+ +  
Sbjct: 74  KEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 57.4 bits (139), Expect = 2e-12
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 51  HMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKE 106
                +   +      C +  C K + +  HL  H R HTGE P  C++  C + F R +
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 107 HLTNHIRQH 115
            L+ H R H
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 56.2 bits (136), Expect = 4e-12
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 23 HLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKD 78
                   +    H C++  C K++ +  H+  H R HTGE PF C +  C + F R D
Sbjct: 4  GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 79 HLVNHVRRH 87
           L  H R H
Sbjct: 64 ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 56.2 bits (136), Expect = 5e-12
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 3  HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
           +    H C +  C KT+ +  HL  H R HTGE P  C++  C + F R D +  H R 
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

Query: 59 H 59
          H
Sbjct: 72 H 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.8 bits (88), Expect = 6e-05
 Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 79  HLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
                    +    H C++  C K++ +  HL  H R HT
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TGE P+ C  C K F+RKD LV+H + H+G+S    
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.1 bits (126), Expect = 8e-11
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE+P+ C  C K F+RKD +V H++ H+G++    
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.3 bits (124), Expect = 2e-10
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TGE P+ C  C K F+RK+ LV+H + H+G+S    
Sbjct: 7  GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE+P++C  C K F+RK+ L +H + H+
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE P+ C  C K F R  HL+ H++RH  E     +
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P+ CN C K+F R  H++ H ++H  E     
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-09
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P+ C+ C K F R  HL+ H+++H  E     +
Sbjct: 7  GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P+ C  C K+F R  HL  H+++H 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 4e-12
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF+RK  L++H R H GE P   +
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 6e-11
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE+P+ C+ C K+F+RK  ++ H+R H GE P   
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K F+RK  L++H R H GE P   +
Sbjct: 7  GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE+P++C  C K+F+RK  L +H R H 
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHA 36

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 7e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAFTRK  L  H + HTGE     +
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ C+ C K+FTRK  +  H++ HTGE     
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C  C K FTRK  L  H + HTGE     +
Sbjct: 7  GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-08
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC+ C K+FTRK  L  H + HT
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 8e-12
 Identities = 19/42 (45%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C KAF  K +L+ H R HTGE P   +
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P  C+ C K+F  K +++ H+R HTGE P   
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-09
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TGE P  C  C K F  K +L+ H R HTGE P   
Sbjct: 7  GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P +C+ C K+F  K +L  H R HT
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT 36

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 8e-12
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE  + C  C KAF RK  L+ H R HTGE P   +
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-11
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE  + C+ C K+F RK  ++ H+R HTGE P   
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE  + C  C K F RK  L+ H R HTGE P   +
Sbjct: 7  GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE  ++C+ C K+F RK  L  H R HT
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHT 36

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 54.9 bits (133), Expect = 9e-12
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TG+ PF C +C K+F  K +LV H R HTGE     +
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TG+ P  C +C KSF  K ++V H+R HTGE   P 
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.5 bits (119), Expect = 9e-10
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG+ P  C +C K+F  K +LV H R HTGE     +
Sbjct: 7  GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TG+ P +CT+C KSF  K +L  H R HT
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT 36

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 54.8 bits (133), Expect = 9e-12
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TG  P+ C  C K F+ K  L+ H R HTG  P   +
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TG  P+ C+ CAK+F+ K  ++ H+R HTG  P   
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG  P+ C  CAKTF+ K  L+ H R HTG  P   +
Sbjct: 7  GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TG  P+ C+ C K+F+ K  L  H R HT
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT 36

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 9e-12
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE P+ C  C K + R+  L  H R HTGE     +
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     +GE P+ C  C K + R+  + +H+R HTGE     
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-10
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P++C  C K + R+  L  H R HTGE     +
Sbjct: 7  GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     +GE P+KC  C K + R+  L  H R HT
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 54.8 bits (133), Expect = 9e-12
 Identities = 18/40 (45%), Positives = 22/40 (55%)

Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
              +GE P+ C  C KAF RKD L++H R H GES    
Sbjct: 2  SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 52.1 bits (126), Expect = 8e-11
 Identities = 15/39 (38%), Positives = 24/39 (61%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
             +GE+P+ C+ C K+F RKD ++ H+R H GE+    
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 51.7 bits (125), Expect = 1e-10
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           +GE P+ C  C K F RK+ L++H R H GES    
Sbjct: 5  SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 85  RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              +GE+P++C+ C K+F RK+ L +H R H 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE PF C+ C KAF +  HL +H+R HTGE P   +
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P  C  C K+F +  H+  H R HTGE P   
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P +C  C K F +  HL +H+R HTGE P   +
Sbjct: 7  GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P KC  C K+F +  HL +H+R HT
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT 36

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C+ C KAFT+K HL  H + HTGE P   +
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C  C+K+FT+K H+  H++ HTGE P   
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C+K FT+K HL  H + HTGE P   +
Sbjct: 7  GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C  C K+FT+K HL  H + HT
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE  + C+ C K+F+R   L+ H R H+GE P   +
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE  ++C  C KSF+R   ++ HER H+GE P   
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE  + C  C K+F+R   L+ H R H+GE P   +
Sbjct: 7  GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE  + C  C KSF+R   L  H R H+
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAFT + +L+ H + HT + P   +
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ C  C K+FT + +++ H++ HT + P   
Sbjct: 2  SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-10
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K FT + +L+ H + HT + P   +
Sbjct: 7  GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+ C  C K+FT + +L  H + HT
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT 36

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TG  P+ C  C KAF  K +L+ H R HTGES    
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 7e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TG  P+ CN C K+F  K +++ H R HTGE+    
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TG  P+ C+ C K F  K +L+ H R HTGES    
Sbjct: 7  GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TG  P+ C  C K+F  K +L  H R HT
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT 36

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE P+ C YC KAF     LV H R HTGE P   +
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P+ C+YC K+F     +V H+R HTGE P   
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 18/38 (47%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P+ CDYC K F     LV H R HTGE P   +
Sbjct: 7  GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P+ C YC K+F     L  H R HT
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT 36

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE PF C+ C K FT+  HL +H R HTGE P   +
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P  C  C K FT+  H+  H+R HTGE P   
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 8e-10
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P +C+ C K FT+  HL +H R HTGE P   +
Sbjct: 7  GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P +C  C K FT+  HL +H R HT
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT 36

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE P+ C  C KAF R  HL  H R HTG  P   +
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P+ C+ C K+F R  H+  H R HTG  P   
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P++C  C K F R  HL  H R HTG  P   +
Sbjct: 7  GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P+KC+ C K+F R  HL  H R HT
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TG   F C  C KAFTRK  L  H + HTGE P   +
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-10
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TG     C  C K+FTRK  +  H++ HTGE P   
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 16/38 (42%), Positives = 18/38 (47%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG     C  C K FTRK  L  H + HTGE P   +
Sbjct: 7  GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TG    +CT C K+FTRK  L+ H + HT
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT 36

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ CQ C KAF    HLV H   H+GE P   +
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C  C K+F    H+V H   H+GE P   
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C  C K F    HLV H   H+GE P   +
Sbjct: 7  GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K+F    HL  H   H+
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TGE P+ C  C KAFT + +L+ H + HTGE P   
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ 68
               TGE P+ C  C K+FT + +++ H++ HTGE P    
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K FT + +L+ H + HTGE P   +
Sbjct: 7  GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 3e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+ CT C K+FT + +L  H + HT
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT 36

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C+ C KAF++  HL+ H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 50.6 bits (122), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C  C K+F++  H++ H+R HTGE P   
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K F++  HL+ H R HTGE P   +
Sbjct: 7  GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.7 bits (99), Expect = 9e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C  C K+F++  HL  H R HT
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT 36

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 55.4 bits (133), Expect = 2e-11
 Identities = 23/95 (24%), Positives = 31/95 (32%), Gaps = 21/95 (22%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCNYCAKSFTRKDHMVYHERQHTG 61
             +       C +TF+    LV HV   H G    + + C                   
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW----------------- 62

Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               C    K+F  K  LVNH+R HTGE     +
Sbjct: 63 ---EECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 47.3 bits (112), Expect = 2e-08
 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 9/67 (13%)

Query: 59  HTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHK--------CTYCMKSFTRKEHLT 109
              +   P + C + F+    LV HV   H G             C    KSF  K  L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 110 NHIRQHT 116
           NHIR HT
Sbjct: 80  NHIRVHT 86

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE PF C+ C K FT+   L +H R HTGE P   +
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     +GE P  C  C K FT+   +  H+R HTGE P   
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P +C+ C K FT+   L +H R HTGE P   +
Sbjct: 7  GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     +GE P KC  C K FT+   L +H R HT
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT 36

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.6 bits (130), Expect = 2e-11
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TGE P+ C  C KAF  K +L+ H R HTGES    
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 6e-11
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K+F  K +++ H+R HTGE+    
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.2 bits (116), Expect = 3e-09
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TGE P+ C+ C K F  K +L+ H R HTGES    
Sbjct: 7  GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C  C K+F  K +L  H R HT
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT 36

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C K++ ++ HL  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P  C  C KS+ ++ H+  H+R HTGE P   
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 9e-10
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P +C  C K++ ++ HL  H R HTGE P   +
Sbjct: 7  GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P KC  C KS+ ++ HLT H R HT
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                GE P+ C  C KAF+ K +L+ H+R H+GE P   +
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 8e-11
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +      GE P+ C+ C K+F+ K +++ H R H+GE P   
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-09
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
            GE P+ C  C K F+ K +L+ H+R H+GE P   
Sbjct: 7  GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +      GE P+ C+ C K+F+ K +L  H+R H+
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C K+F+    L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P  C  C KSF+    +  H+R HTGE P   
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.1 bits (113), Expect = 7e-09
 Identities = 16/37 (43%), Positives = 18/37 (48%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TGE P  C  C K+F+    L  H R HTGE P   
Sbjct: 7  GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P +C  C KSF+    L  H R HT
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT 36

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE PF C+ C K F       +H R H+GE P   +
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 1e-10
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ 68
          +     +GE P  C  C K F        H+R H+GE P    
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P +C+ C K F       +H R H+GE P   +
Sbjct: 7  GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     +GE P KC  C K F       +H R H+
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                G+  F C  C K FT+   L  H R HTGE P   +
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
                G+    CN C K+FT+   +  H+R HTGE P   
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
            G+   +C+ C KTFT+   L  H R HTGE P   +
Sbjct: 7  GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 G+   KC  C K+FT+   LT H R HT
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K+F +K HL  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 19/41 (46%), Positives = 22/41 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C KSF +K H+  H R HTGE P   
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-10
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C+ C K+F +K HL  H R HTGE P   +
Sbjct: 7  GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+ C  C KSF +K HL  H R HT
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT 36

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C K FT K +L+ H + HTGE P   +
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE+P  C+ C K FT K +++ H++ HTGE P   
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-09
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P  C  C K FT K +L+ H + HTGE P   +
Sbjct: 7  GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE+P  C+ C K FT K +L  H + HT
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT 36

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C K F+R+  L  H + HTGE P   +
Sbjct: 3  SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P  C  C K F+R+  +  H + HTGE P   
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P +C  C K F+R+  L  H + HTGE P   +
Sbjct: 7  GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P KC  C K F+R+  L  H + HT
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE P+ C  C K FT+  HL NH R HTGE P   +
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     +GE P+ CN C K FT+  H+  H R HTGE P   
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-10
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P++C+ C K FT+  HL NH R HTGE P   +
Sbjct: 7  GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     +GE P+KC  C K FT+  HLTNH R HT
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C K+F  +  L  H   HT E P   +
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P  C+ C KSF  +  +  H   HT E P   
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-09
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P +CD C K+F  +  L  H   HT E P   +
Sbjct: 7  GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P KC  C KSF  +  L  H   HT
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P  C  C K+F +  HL+ H R HTGE P   +
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 9e-11
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE PH CN C KSF +  H++ H+R HTGE P   
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 9e-10
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE PH+C+ C K+F +  HL+ H R HTGE P   +
Sbjct: 7  GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 17/35 (48%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE PHKC  C KSF +  HL  H R HT
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT 36

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 3e-11
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K F R  HL  H   HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C+ C K F R  H+  H+  HTGE P   
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-10
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C  C K F R  HL  H   HTGE P   +
Sbjct: 7  GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K F R  HL  H   HT
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT 36

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF    HL  H+R HT E+    +
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-10
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ CN C K+F    H+  H R HT ET    
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-09
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C+ C K F    HL  H+R HT E+    +
Sbjct: 7  GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+ C  C K+F    HL  H+R HT
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE PF C  C K F R+ HL  H+R H+ E     +
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P +C+ C K F R+ HL  H+R H+ E     +
Sbjct: 7  GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P  CN C K F R+ H+  H R H+ E     
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P KC  C K F R+ HL  H+R H+
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C+ C K +  K +L  H + HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C  C K +  K ++  H++ HTGE P   
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K +  K +L  H + HTGE P   +
Sbjct: 7  GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K +  K +L  H + HT
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               + E P+ C+ C K + R+ +L  H R H GE     +
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     + E P+ C  C K + R+ ++  H+R H GE     
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           + E P++C+ C K + R+ +L  H R H GE     +
Sbjct: 7  GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-08
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     + E P+KC  C K + R+ +L  H R H 
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 3e-11
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P  C  C KAF  K  L+ H R H  +     +
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P  C  C K+F  K  ++ H+R H  +     
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.3 bits (121), Expect = 6e-10
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P +C  C K F  K  L+ H R H  +     +
Sbjct: 7  GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P KCT C K+F  K  L  H R H 
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV 36

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 3e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K+FT K  L  H + HTGE     +
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 3e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ C+ C KSFT K  +  H++ HTGE     
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C  C K+FT K  L  H + HTGE     +
Sbjct: 7  GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-07
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC+ C KSFT K  L  H + HT
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                GE  + C  C K F++  HL  H R HTGE P   +
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
                GE  + C+ C K F++  H+  H+R HTGE P   
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
            GE  ++CD C K F++  HL  H R HTGE P   +
Sbjct: 7  GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE  +KC  C K F++  HL  H R HT
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT 36

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 3e-11
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF +K +L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ C  C K+F +K ++  H+R HTGE P   
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-09
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+RC  C K F +K +L  H R HTGE P   +
Sbjct: 7  GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P++C  C K+F +K +LT H R HT
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT 36

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C+ C K F  +  L  H   HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ C  C K F  +  +  H   HTGE P   
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K F  +  L  H   HTGE P   +
Sbjct: 7  GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC  C K F  +  L  H   HT
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT 36

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K FT+  HL NH R HTG  P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 3e-10
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K FT+  H+  H+R HTG  P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K FT+  HL NH R HTG  P   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 17/34 (50%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K FT+  HL NH R HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT 36

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K+FT+K  L  H + HTGE P   +
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C+ C KSFT+K  +  H++ HTGE P   
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K+FT+K  L  H + HTGE P   +
Sbjct: 7  GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C+ C KSFT+K  L  H + HT
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT 36

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
           +GE PF C  C KAF+ K +L+ H + H  E P   +
Sbjct: 5  SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 52.5 bits (127), Expect = 7e-11
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P  C  C K F+ K +L+ H + H  E P   +
Sbjct: 5  SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 52.2 bits (126), Expect = 9e-11
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
           +GE P  C+ C K+F+ K +++ H++ H  E P   
Sbjct: 5  SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 87  HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            +GE P  C+ C K+F+ K +L  H + H 
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               +GE P+ C  C KAF  K  L+ H R H G S    
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     +GE P+ CN C K+F  K  ++ HER H G +    
Sbjct: 2  SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           +GE P+ C+ C K F  K  L+ H R H G S    
Sbjct: 7  GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 2e-06
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     +GE P++C  C K+F  K  L  H R H 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TGE P+ C  C K+F +K  L  H R HTGE+P   
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-10
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C+ C KSF +K  +  H+R HTGE P   
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K+F +K  L  H R HTGE+P   +
Sbjct: 7  GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C+ C KSF +K  L  H R HT
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TGE P+ C  C KAFT + +L  H + HTGE P   
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C  C K+FT + ++  H++ HTGE P   
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-09
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TGE P+RC  C K FT + +L  H + HTGE P   
Sbjct: 7  GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C  C K+FT + +L  H + HT
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT 36

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 4e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TG+ P+ C  C KAF  K  L+ H R HTGE P   +
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 1e-10
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TG+ P+ C  C K+F  K  ++ H R HTGE P   
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG+ P+ C  C K F  K  L+ H R HTGE P   +
Sbjct: 7  GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 9e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TG+ P++C  C K+F  K  L  H R HT
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT 36

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF  +  L  H   H+GE P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K+F  +  +  H+  H+GE P   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K F  +  L  H   H+GE P   +
Sbjct: 7  GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K+F  +  L  H   H+
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS 36

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                G  P+ C  C K+F+ K  L+ H R HT E P   +
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
                G +P+ C+ C KSF+ K  ++ H+R HT E P   
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 8e-10
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
            G  P++C  C K+F+ K  L+ H R HT E P   +
Sbjct: 7  GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 G +P+KC+ C KSF+ K  L  H R HT
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE  + C  C K F+R   L  H + HTGE P   +
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE  + CN C K F+R   +  H++ HTGE P   
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE  ++C+ C K F+R   L  H + HTGE P   +
Sbjct: 7  GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE  +KC  C K F+R   L+ H + HT
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 52.7 bits (127), Expect = 6e-11
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 55 HERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C +  C   F+R D L  H R H+G  P   +
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.1 bits (123), Expect = 2e-10
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 26 NHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQ 68
          +     TGE P  C +  C   F+R D +  H R H+G  P    
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 47.3 bits (113), Expect = 8e-09
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 2  WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN 40
            TGE P  C +  C   F+R + L  H R H+G  P   +
Sbjct: 6  SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 44.6 bits (106), Expect = 8e-08
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 82  NHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
           +     TGE P  CT+  C   F+R + L+ H R H+
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 6e-11
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE P+ C  C K F++K  L  H R HTGE P   +
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE P+ CN C K+F++K  +  H+R HTGE P   
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-09
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE P+ C+ C KTF++K  L  H R HTGE P   +
Sbjct: 7  GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE P+ C  C K+F++K  L+ H R HT
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT 36

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 6e-11
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K FT+  HLV H   HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ CN C K FT+  H+V H   HTGE P   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-09
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K FT+  HLV H   HTGE P   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC  C K FT+  HL  H   HT
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT 36

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 6e-11
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF    +L  H   HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K+F    ++  H+  HTGE P   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K F    +L  H   HTGE P   +
Sbjct: 7  GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K+F    +LT H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT 36

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 6e-11
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE  + C  C KAF +K  L  H R H GE P   +
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE  + C+ C K+F +K  +  H+R H GE P   
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE  + C  C K F +K  L  H R H GE P   +
Sbjct: 7  GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE  ++C+ C K+F +K  L+ H R H 
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR 36

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 8e-11
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                GE  + C+ C   F++   L  H   H GE P   +
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-09
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
                GE    C  C   F++   +  H+  H GE P   
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 4e-09
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
            GE   +C  C   F++   L  H   H GE P   +
Sbjct: 7  GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 9/34 (26%), Positives = 11/34 (32%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE   KC  C   F++   L  H   H 
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV 36

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 8e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TG  P+ C  C KAF++   L  H R HTGE P   +
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TG  P+ CN C K+F++   +  H+R HTGE P   
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG  P++C+ C K F++   L  H R HTGE P   +
Sbjct: 7  GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TG  P++C  C K+F++   L  H R HT
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT 36

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 8e-11
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P  C+ C K+F+    L+ H R HTGE+P   +
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE PH C  C KSF+    ++ H+R HTGE P   
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE PH C  C K+F+    L+ H R HTGE+P   +
Sbjct: 7  GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE PH+C  C KSF+    L  H R HT
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT 36

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 8e-11
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 54 YHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                TGE P+ C  C K FT+  HL  H R HTG  P   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K FT+  H+  H R HTG  P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K FT+  HL  H R HTG  P   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K FT+  HL  H R HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT 36

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 52.2 bits (126), Expect = 8e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C+ C K+F     L+ H R H+GE P   +
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.9 bits (120), Expect = 8e-10
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P++C  C KSF     ++ H+R H+GE P   
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K+F     L+ H R H+GE P   +
Sbjct: 7  GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+ C  C KSF     L  H R H+
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 9e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TG+ P+ C  C K FT+  HL  H   HTGE P   +
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TG+ P+ CN C K FT+  H+  H   HTGE P   
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG+ P++C+ C K FT+  HL  H   HTGE P   +
Sbjct: 7  GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TG+ P+KC  C K FT+  HL  H   HT
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT 36

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 9e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF+ +  L  H   HTG+ P   +
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K+F+ +  +  H+  HTG+ P   
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C+ C K F+ +  L  H   HTG+ P   +
Sbjct: 7  GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C  C K+F+ +  LT H   HT
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 9e-11
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C+ C KAF     L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P++C  C K+F     +  H+R HTGE P   
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C+ C K F     L  H R HTGE P   +
Sbjct: 7  GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+ C  C K+F     L  H R HT
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT 36

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 9e-11
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K FT+  HL  H   HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 9e-10
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ CN C K FT+  H+  H   HTGE P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K FT+  HL  H   HTGE P   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C K FT+  HL  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT 36

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 9e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF++   L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ CN C K+F++   +  H+R HTGE P   
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K F++   L  H R HTGE P   +
Sbjct: 7  GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC  C K+F++   L  H R HT
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT 36

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 9e-11
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               +G+ P+ C+ C K F +  HL  H R HTGE     
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +G+ P+ C  C K+F +  H+  H+R HTGE     
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-10
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +G+ P+ C  C KTF +  HL  H R HTGE     +
Sbjct: 7  GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +G+ P++C  C K+F +  HL  H R HT
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K F    +L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ CN C K F    ++  H+R HTGE P   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C+ C K F    +L  H R HTGE P   +
Sbjct: 7  GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC  C K F    +L+ H R HT
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT 36

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-10
 Identities = 18/42 (42%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE PF C  C KAF+    L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P  C  C K+F+    +  H R HTGE P   
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-08
 Identities = 16/38 (42%), Positives = 18/38 (47%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P  C  C K F+    L  H R HTGE P   +
Sbjct: 7  GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P  C  C K+F+    L  H R HT
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-10
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                GE P+ C  C K+F+    L  H   HT E P   +
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
            GE P++C  C K+F+    L  H   HT E P   +
Sbjct: 7  GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
                GE P+ C+ C KSF+    +  H   HT E P   
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE P++C+ C KSF+    LT H   HT
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 1e-10
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C K+F     L  H R HTGE P   +
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ 68
               TGE P+ C+ C KSF     +  H+R HTGE P    
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++CD C K+F     L  H R HTGE P   +
Sbjct: 7  GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 16/34 (47%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P+KC  C KSF     LT H R HT
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT 36

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 1e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF+ +  L  H R H+G+ P   +
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 6e-10
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C+ C K+F+ +  +  H+R H+G+ P   
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ C  C K F+ ++ L  H R H+G+ P   +
Sbjct: 7  GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C+ C K+F+ ++ L+ H R H+
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-10
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF        H R HTG+ P   +
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.3 bits (121), Expect = 6e-10
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TGE P+ C  C K+F        H+R HTG+ P   
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 8e-09
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P++C  C K F        H R HTG+ P   +
Sbjct: 7  GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TGE P+KC  C K+F      T H R HT
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-10
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TG  P+ C  C KAF+    L  H   HTGE P   
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     TG  P+ CN C K+F+    +  H+  HTGE P   
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-09
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TG  P+ C+ C K F+    L  H   HTGE P   +
Sbjct: 7  GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     TG  P+ C  C K+F+    LT H   HT
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT 36

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               TGE P+ C  C KAF+    L  H R H+GE P   +
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P+ C+ C K+F+    +  H+R H+GE P   
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           TGE P+ CD C K F+    L  H R H+GE P   +
Sbjct: 7  GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P++C  C K+F+    LT H R H+
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +     +    H C+ C + FT K H+  H+R HTGE P   
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +      C  C + FT K HL  H R HTGE P   +
Sbjct: 3  SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           +    H+C  C + FT K HL  H R HTGE P   
Sbjct: 7  GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +     +    H+C  C + FT K HL  H R HT
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHKCT 96
               TG+ P+ C  C KAF +   L+ H R  HTGE P   +
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ-HTGETPFPC 67
          +     TG+ P+ C  C K+F +   ++ H R  HTGE P   
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.0 bits (110), Expect = 2e-08
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCN 40
           TG+ P+ C  C K F +   L+ H R  HTGE P   +
Sbjct: 7  GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.5 bits (93), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ-HT 116
           +     TG+ P++C  C K+F +   L  H R  HT
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.7 bits (122), Expect = 4e-10
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               TGE PF C+ C   F+    L  H+R H    P   
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-08
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               TGE P  C  C  +F+    +  H R H    P   
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-08
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           TGE P +C  C   F+    L  H+R H    P   
Sbjct: 7  GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                TGE P +C  C  +F+    L  H+R H 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
                GE    C  C K F +  + + H R HTGE P   +
Sbjct: 3  SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 6e-10
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
          +      GE  H C+ C K F +  + + H R HTGE P   
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 5e-09
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
            GE  HRC  C K F +  + + H R HTGE P   +
Sbjct: 7  GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +      GE  H+C+ C K F +  +   H R HT
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.5 bits (119), Expect = 1e-09
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
                GE P+ C+ C K+F++K  ++ H R HTG  P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.1 bits (118), Expect = 1e-09
 Identities = 16/39 (41%), Positives = 21/39 (53%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
                GE P+ C  C KAF++K  L+ H+R HTG  P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.0 bits (110), Expect = 2e-08
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
            GE P+RCD C K F++K  L+ H+R HTG  P 
Sbjct: 6  SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE P++C  C K+F++K  L  HIR HT
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.0 bits (118), Expect = 1e-09
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
                GE P+PC+ C   F     L +H+R HTG  P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.0 bits (110), Expect = 2e-08
 Identities = 12/39 (30%), Positives = 14/39 (35%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
                GE P+ C  C   F     +  H R HTG  P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.6 bits (109), Expect = 3e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
            GE P+ C+ C   F   + L +H+R HTG  P 
Sbjct: 6  SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.5 bits (101), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE P+ C  C   F   + L +H+R HT
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
               T    + C  C KAFTR  HL  H + HT +S    
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.6 bits (114), Expect = 6e-09
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               T    ++CN C K+FTR  H+  H++ HT ++    
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           T    + C+ C K FTR  HL  H + HT +S    
Sbjct: 7  GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                T    + C  C K+FTR  HLT H + HT
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.7 bits (117), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
                GE P+ C+ C   F +  HL  HV  HTG  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.7 bits (112), Expect = 1e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
            GE P++C+ C   F +  HL  HV  HTG  P 
Sbjct: 6  SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.4 bits (111), Expect = 1e-08
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
                GE P+ C  C   F +  H+  H   HTG  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.4 bits (106), Expect = 9e-08
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE P+KC  C   F +  HL  H+  HT
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 6e-09
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 9  HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          + C+ C     +   L  H+R HT   P+HC YC  SF  K ++  H +     
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 1e-08
 Identities = 14/52 (26%), Positives = 21/52 (40%)

Query: 39 CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
          C  C     +   +  H R HT   P+ C YC  +F  K +L  H++     
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.9 bits (108), Expect = 4e-08
 Identities = 18/50 (36%), Positives = 25/50 (50%)

Query: 67  CQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           C+ C     +   L  H+R HT   P+ CTYC  SF  K +LT H++   
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 35.1 bits (80), Expect = 4e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
          HT   P+ C YC  +F  K +L  H++     
Sbjct: 24 HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 47.3 bits (113), Expect = 7e-09
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHK 94
                GETP+ C  C K+FT++  L  H R  +   P  
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 47.3 bits (113), Expect = 8e-09
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
                GE+P+ C  C KSFT++  +  H+R  +   P 
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.7 bits (109), Expect = 3e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
            GETP+ C  C K+FT++  L  H R  +   P 
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.0 bits (94), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                 GE+P+ C  C KSFT++  L  H R  +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.8 bits (112), Expect = 9e-09
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
             +G+  + C  C KSF +K  +  HER HTG  P 
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.4 bits (111), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
              +G+  + CQ C K+F +K  L  H R HTG  P 
Sbjct: 2  SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 45.3 bits (108), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
           +G+  + C  C K+F +K  L  H R HTG  P 
Sbjct: 5  SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 85  RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              +G+  ++C  C KSF +K  LT H R HT
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHT 34

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 1e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
               +GE  H C+ C K+F     +  H+R H GE     
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 1e-07
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
               +GE    C  C K F     L  H R H GE     +
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 1e-07
 Identities = 14/38 (36%), Positives = 16/38 (42%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
           +GE  H CD C K F     L  H R H GE     +
Sbjct: 7  GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.3 bits (95), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 13/34 (38%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
                +GE  H C  C K+F     L  H R H 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.3 bits (112), Expect = 1e-08
 Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 7/71 (9%)

Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
                + H G+    C+ C   F R+          +      C+ C K   ++  L  
Sbjct: 5  SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57

Query: 83 HVRRHTGESPH 93
               +G+   
Sbjct: 58 DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.8 bits (108), Expect = 6e-08
 Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 7/63 (11%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          H G+   +C  C   F R+          +      C  C K   ++  +   E   +G+
Sbjct: 13 HLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGNESGK 65

Query: 63 TPF 65
             
Sbjct: 66 KTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 44.7 bits (105), Expect = 1e-07
 Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 7/62 (11%)

Query: 55  HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
            ++ H G+    C  C   F R+          +      C  C K   ++  L      
Sbjct: 9   RQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGN 61

Query: 115 HT 116
            +
Sbjct: 62  ES 63

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.5 bits (111), Expect = 1e-08
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
           +GE P+ C  C + F+  + LV H + HT +S    
Sbjct: 5  SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.2 bits (110), Expect = 2e-08
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
           +GE P+ C  C +TF+    LV H + HT +S    
Sbjct: 5  SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.6 bits (106), Expect = 7e-08
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
           +GE P+ C  C ++F+  + +V H++ HT ++    
Sbjct: 5  SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.6 bits (93), Expect = 6e-06
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 87  HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            +GE P+ C  C ++F+    L  H + HT
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHT 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 45.8 bits (109), Expect = 3e-08
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH 87
            R  TG  PF C  C ++F+R DHL  H +RH
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.1 bits (102), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
             R  TG  P +C  C +SF+R +HL  H ++H +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.6 bits (93), Expect = 5e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
            R  TG  P  C  C +SF+R DH+  H ++H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQH 31
           TG  P +C  C ++F+R +HL  H ++H
Sbjct: 6  STGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 8e-08
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
                GE PF C  C + FT++++LV H R H  +S  
Sbjct: 3  SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (97), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
            GE P +C  C + FT++ +LV H R H  +S  
Sbjct: 7  GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (95), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
          +      GE+P  C+ C + FT+++++V HER H  ++ 
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 82  NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           +      GE+P KC+ C + FT++ +L  H R H 
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.5 bits (104), Expect = 5e-07
 Identities = 18/106 (16%), Positives = 29/106 (27%), Gaps = 6/106 (5%)

Query: 14  CAKTFTRKEHLVNHVRQHTGESPHHCN----YCAKSFTRKDHMVYHERQHTGETPFPCQY 69
                T +E    H      +                  +   +Y        + F C  
Sbjct: 20  IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 70  CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
           C   F+    L  H+R    E    C  C K FT  +   +H+ + 
Sbjct: 80  CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 36.5 bits (83), Expect = 5e-04
 Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 3   HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
               +   C  C   F+    L  H+R    E    C  C K FT  D  + H  + 
Sbjct: 69  SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCA 43
                  C+ C K F    HL  H   H+GE P+     +
Sbjct: 7  GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC 70
                    C  C K F    H+  H+  H+GE P+     
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 7e-06
 Identities = 11/42 (26%), Positives = 14/42 (33%)

Query: 57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC 98
                    C+ C K F    HL  H   H+GE P+     
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 6/60 (10%), Positives = 14/60 (23%)

Query: 56  ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
                  +    +      ++    V      +    ++C  C         L  H+  H
Sbjct: 144 GSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 4e-05
 Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 3/79 (3%)

Query: 33  GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
            +  + C  C    +       HER         C YC   F   +    H         
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69

Query: 93  HKCTYCMKSFTRKEHLTNH 111
             C  CM++F     +  H
Sbjct: 70  LTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 36.8 bits (84), Expect = 3e-04
 Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 3/82 (3%)

Query: 5  GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
           +  ++C  C    +      +H R     +   C YC+  F   +    HE +   +  
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHESKCEYK-K 69

Query: 65 FPCQYCPKAFTRKDHLVNHVRR 86
            C  C + F     +  H   
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVE 91

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 35.0 bits (81), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
             C+ C + F R+EHL  H R HT E
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNE 28

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 33.8 bits (78), Expect = 8e-04
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
           F C+ C +AF R++HL  H R HT E
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNE 28

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 64 PFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
          PF C +  C K FTR D L  H R HTGE
Sbjct: 2  PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	126
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.97
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.97
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.97
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.97
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.92
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.92
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.92
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.91
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.91
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.91
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.9
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.9
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.9
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.9
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.89
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.89
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.89
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.88
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.87
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.84
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.84
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.83
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.83
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.83
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.8
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.8
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.8
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.79
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.79
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.78
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.78
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.77
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.77
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.77
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.76
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.76
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.76
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.75
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.74
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.74
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.73
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.73
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.73
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.73
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.72
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.72
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.71
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.7
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.69
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.67
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.66
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.66
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.66
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.63
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.62
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.61
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.6
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.58
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.58
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.57
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.56
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.54
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.53
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.52
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.5
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.49
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.49
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.48
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.47
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.47
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.46
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.45
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.43
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.43
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.42
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.41
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.39
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.38
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.38
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.37
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.37
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.34
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.34
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.34
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.33
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.32
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.32
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.31
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.3
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.3
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.28
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.27
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.27
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.27
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.26
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.25
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.25
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.24
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.24
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.23
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.23
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.19
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.16
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.16
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.14
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.11
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.11
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.1
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.1
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.09
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.07
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.06
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.05
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.04
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.03
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.02
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.02
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	99.0
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.99
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.99
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.98
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.94
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.93
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.93
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.91
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.91
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.91
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.9
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.9
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.9
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.89
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.89
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.88
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.87
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.87
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.87
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.83
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.83
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.33
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.81
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.79
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.23
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.72
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.72
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.67
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.64
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.62
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.61
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.61
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.6
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.59
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.58
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.57
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.55
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.55
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.55
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.55
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.55
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.54
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.44
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.79
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.69
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.29
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.24
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.83
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.75
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	97.58
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.51
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.39
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.93
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.68
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	96.65
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.65
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.38
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	95.18
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.17
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	94.28
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	92.91
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	92.52
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	92.35
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	92.34
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	92.2
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.05
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	91.9
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.4
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	90.43
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	89.94
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	89.77
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	89.44
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	89.22
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	88.65
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	88.21
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	87.18
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	86.24
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	83.65
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	83.63
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	82.58
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	81.55
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	80.46

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=3.9e-32  Score=160.25  Aligned_cols=117  Identities=47%  Similarity=0.914  Sum_probs=56.0

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHH
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN   82 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~   82 (126)
                      |.++++|.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|+..|.++++|.|+.|++.|.+...|..
T Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  123 (190)
T 2i13_A           44 HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA  123 (190)
T ss_dssp             C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHH
T ss_pred             cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHH
Confidence            34444555555555555555555555555444445555555555444445555444444444444444444444444444


Q ss_pred             HHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        83 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      |+++|.++++|.|..|++.|.....|..|+++|++++
T Consensus       124 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A          124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             HHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             HHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4444444444444444444444444444444444433

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=2.5e-31  Score=156.81  Aligned_cols=118  Identities=47%  Similarity=0.916  Sum_probs=102.1

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHH
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN   82 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~   82 (126)
                      |.++++|.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.+...|..
T Consensus        72 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  151 (190)
T 2i13_A           72 HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHT  151 (190)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHH
Confidence            55778899999999999999999999998888889999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        83 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++.
T Consensus       152 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             HHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999888754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=5.6e-31  Score=145.67  Aligned_cols=116  Identities=36%  Similarity=0.713  Sum_probs=108.9

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhh---hcCCCCcccCCCCCcCCChhhH
Q psy10762          4 TGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ---HTGETPFPCQYCPKAFTRKDHL   80 (126)
Q Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~~~~~~~l   80 (126)
                      +++++|.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|+..   +.++++|.|+.|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            5789999999999999999999999999999999999999999999999999985   5788899999999999999999


Q ss_pred             HHHHHhhcCCCCccCcccccccCCHHHHHHHHHH-hhhcc
Q psy10762         81 VNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ-HTVRR  119 (126)
Q Consensus        81 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~  119 (126)
                      ..|+++|.++++|.|.+|++.|.....|.+|++. |.++.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999999999875 65543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.97  E-value=4.2e-31  Score=145.28  Aligned_cols=112  Identities=43%  Similarity=0.931  Sum_probs=108.1

Q ss_pred             CCCcceeccc--cccccCChhHHHHHHHhhcCCCCcccC--CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhh
Q psy10762          4 TGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDH   79 (126)
Q Consensus         4 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~   79 (126)
                      +++++|.|..  |++.|.....|..|+..|.++++|.|+  .|+..|.....|..|++.|.++++|.|+.|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            5789999997  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCccC--cccccccCCHHHHHHHHHHh
Q psy10762         80 LVNHVRRHTGESPHKC--TYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        80 l~~h~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  115 (126)
                      |..|+++|.++++|.|  +.|++.|.+.+.|.+|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999  89999999999999999886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.97  E-value=1.2e-31  Score=149.78  Aligned_cols=103  Identities=24%  Similarity=0.447  Sum_probs=97.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHH
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLV   81 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~   81 (126)
                      +|.|+++|.|++|++.|.....|..|+.+|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|++.|.....|.
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCC------CccCcccccccCC
Q psy10762         82 NHVRRHTGES------PHKCTYCMKSFTR  104 (126)
Q Consensus        82 ~h~~~~~~~~------~~~C~~C~~~f~~  104 (126)
                      .|++++++++      +|.|.+|++.|..
T Consensus        96 ~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           96 SHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            9999988654      5889999998864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.97  E-value=1.8e-30  Score=143.70  Aligned_cols=116  Identities=34%  Similarity=0.684  Sum_probs=104.1

Q ss_pred             CCcceecc--ccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCC--CCCcCCChhhH
Q psy10762          5 GETPHRCD--YCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHL   80 (126)
Q Consensus         5 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l   80 (126)
                      .+++|.|+  .|++.|.....|..|+..| +.++|.|+.|+..|.....|..|++.|.++++|.|+.  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999999 7789999999999999999999999999999999985  99999999999


Q ss_pred             HHHHHhhcCCCCccCc--ccccccCCHHHHHHHHHHhhhcccc
Q psy10762         81 VNHVRRHTGESPHKCT--YCMKSFTRKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        81 ~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  121 (126)
                      ..|+++|.++++|.|+  .|++.|.+.+.|..|+++|+++++.
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999999996  5999999999999999999988764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=144.69  Aligned_cols=121  Identities=36%  Similarity=0.697  Sum_probs=111.4

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHh-hcCCCC--------cccCCcccccCCchHHHHHHhhhcCCCCcccCC--CC
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESP--------HHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY--CP   71 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~   71 (126)
                      ...+..|.|..|++.|.....|..|+.. |.+..+        +.|+.|+..|.....|..|++.|.++++|.|+.  |+
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            3456789999999999999999999997 666544        789999999999999999999999999999998  99


Q ss_pred             CcCCChhhHHHHHHhhcCCCCccCcc--cccccCCHHHHHHHHHHhhhccccCC
Q psy10762         72 KAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTVRRVNDL  123 (126)
Q Consensus        72 ~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~  123 (126)
                      +.|.....|..|+++|.++++|.|..  |++.|.....|.+|+++|++++...+
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999997  99999999999999999999876653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=1.5e-28  Score=140.67  Aligned_cols=116  Identities=35%  Similarity=0.743  Sum_probs=97.6

Q ss_pred             CCCCCcceecccc-----ccccCChhHHHHHHHhhcCCCCcccCC--cccccCCchHHHHHHhhhcCCCCcccCC--CCC
Q psy10762          2 WHTGETPHRCDYC-----AKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPK   72 (126)
Q Consensus         2 ~~~~~~~~~C~~C-----~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~   72 (126)
                      +|.++++|.|..|     ++.|.....|..|+..|.++++|.|+.  |+..|.....|..|++.|.++++|.|+.  |++
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            4667788887643     488888888888888888888888875  8888888888888888888888888887  888


Q ss_pred             cCCChhhHHHHH-HhhcCCCCccCcc--cccccCCHHHHHHHHHHhhh
Q psy10762         73 AFTRKDHLVNHV-RRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        73 ~~~~~~~l~~h~-~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  117 (126)
                      .|.+...|..|+ +.|.++++|.|.+  |++.|...+.|..|+++|++
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            888888888888 7888888888887  88888888888888888764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.9e-28  Score=144.46  Aligned_cols=114  Identities=37%  Similarity=0.633  Sum_probs=61.0

Q ss_pred             CCCcceec--cccccccCChhHHHHHHHhhcCCCCcccC--CcccccCCchHHHHHH-hhh-cCCCCccc--CCCCCcCC
Q psy10762          4 TGETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHE-RQH-TGETPFPC--QYCPKAFT   75 (126)
Q Consensus         4 ~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~--~C~~~~~~~~~l~~h~-~~~-~~~~~~~C--~~C~~~~~   75 (126)
                      .++++|.|  +.|++.|.....|..|+.+|.++++|.|+  .|+..|.+...|..|+ ..| .+.++|.|  +.|++.|.
T Consensus        38 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~  117 (190)
T 1tf6_A           38 TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK  117 (190)
T ss_dssp             HCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECS
T ss_pred             CCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccC
Confidence            34455555  44555555555555555555555555555  4555555555555555 333 23445555  45555555


Q ss_pred             ChhhHHHHHHhhcCCCCccCcc--cccccCCHHHHHHHHHHhhh
Q psy10762         76 RKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        76 ~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  117 (126)
                      +...|..|+++|+++++|.|+.  |++.|.+.+.|.+|+++|++
T Consensus       118 ~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          118 KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             SHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            5555555555555555555544  55555555555555555544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=3e-27  Score=139.30  Aligned_cols=121  Identities=31%  Similarity=0.555  Sum_probs=111.2

Q ss_pred             CCCcceec--cccccccCChhHHHHHHHhhcCCCCccc--CCcccccCCchHHHHHHhhhcCCCCcccC--CCCCcCCCh
Q psy10762          4 TGETPHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHC--NYCAKSFTRKDHMVYHERQHTGETPFPCQ--YCPKAFTRK   77 (126)
Q Consensus         4 ~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c--~~C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~   77 (126)
                      ...++|.|  ..|++.|.....|..|+..|.++++|.|  +.|+..|.....|..|+++|.++++|.|+  .|++.|.+.
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence            35688999  6899999999999999999999999999  88999999999999999999999999999  899999999


Q ss_pred             hhHHHHH-Hhh-cCCCCccC--cccccccCCHHHHHHHHHHhhhccccCCC
Q psy10762         78 DHLVNHV-RRH-TGESPHKC--TYCMKSFTRKEHLTNHIRQHTVRRVNDLP  124 (126)
Q Consensus        78 ~~l~~h~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  124 (126)
                      ..|..|+ +.| .++++|.|  ..|++.|.+.+.|..|+++|++++...++
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  138 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP  138 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCC
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCC
Confidence            9999999 566 46789999  89999999999999999999998877654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=3.3e-27  Score=135.03  Aligned_cols=119  Identities=34%  Similarity=0.666  Sum_probs=108.2

Q ss_pred             CcceeccccccccCChhHHHHHHH---hhcCCCCcccCC-----cccccCCchHHHHHHhhhcCCCCcccCC--CCCcCC
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVR---QHTGESPHHCNY-----CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFT   75 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~---~h~~~~~~~c~~-----C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~   75 (126)
                      +.+|.|+.|++.|.....|..|+.   +|.++++|.|++     |+..|.....|..|++.|.++++|.|+.  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            467999999999999999999998   677888898875     3488999999999999999999999985  999999


Q ss_pred             ChhhHHHHHHhhcCCCCccCcc--cccccCCHHHHHHHH-HHhhhccccCCC
Q psy10762         76 RKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHI-RQHTVRRVNDLP  124 (126)
Q Consensus        76 ~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~  124 (126)
                      +...|..|+++|.++++|.|.+  |++.|.+.+.|..|+ ++|++++...++
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            9999999999999999999998  999999999999998 789888765543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=3.8e-28  Score=135.56  Aligned_cols=95  Identities=26%  Similarity=0.465  Sum_probs=89.5

Q ss_pred             HHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCH
Q psy10762         26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRK  105 (126)
Q Consensus        26 ~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~  105 (126)
                      .|..+|.++++|.|++|++.|.....|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|++.|...
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            34457788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccc
Q psy10762        106 EHLTNHIRQHTVRRV  120 (126)
Q Consensus       106 ~~l~~H~~~h~~~~~  120 (126)
                      +.|..|+++|++++.
T Consensus        92 ~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHHHTCCCT
T ss_pred             HHHHHHhHHhcCCCC
Confidence            999999999987654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.92  E-value=1.6e-24  Score=116.77  Aligned_cols=91  Identities=35%  Similarity=0.706  Sum_probs=71.0

Q ss_pred             CCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHH
Q psy10762         33 GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI  112 (126)
Q Consensus        33 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  112 (126)
                      .+++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            34567777777777777777777777777778888888888888888888888888888888888888888888888888


Q ss_pred             HHhhhccccCC
Q psy10762        113 RQHTVRRVNDL  123 (126)
Q Consensus       113 ~~h~~~~~~~~  123 (126)
                      ++|++++....
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            88877765543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.92  E-value=4.9e-25  Score=115.45  Aligned_cols=87  Identities=37%  Similarity=0.828  Sum_probs=68.9

Q ss_pred             CCCcccC--CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHH
Q psy10762         34 ESPHHCN--YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH  111 (126)
Q Consensus        34 ~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H  111 (126)
                      +++|.|+  .|+..|.....|..|++.|.++++|.|+.|++.|.+...|..|+++|.++++|.|..|++.|...+.|.+|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4567776  47777777777777877777788888888888888888888888888888888888888888888888888


Q ss_pred             HHHhhhccc
Q psy10762        112 IRQHTVRRV  120 (126)
Q Consensus       112 ~~~h~~~~~  120 (126)
                      +++|+++++
T Consensus        82 ~~~H~~~k~   90 (90)
T 1a1h_A           82 TKIHLRQKD   90 (90)
T ss_dssp             HGGGGC---
T ss_pred             HHHhcccCC
Confidence            888887653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.1e-25  Score=116.14  Aligned_cols=89  Identities=37%  Similarity=0.695  Sum_probs=68.9

Q ss_pred             cCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHH
Q psy10762         32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH  111 (126)
Q Consensus        32 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H  111 (126)
                      .++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            34566777777777777777777777777777788888888888888888888888888888888888888888888888


Q ss_pred             HHHhhhccc
Q psy10762        112 IRQHTVRRV  120 (126)
Q Consensus       112 ~~~h~~~~~  120 (126)
                      +++|++++.
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            888776653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.91  E-value=6.4e-24  Score=114.36  Aligned_cols=92  Identities=35%  Similarity=0.681  Sum_probs=88.0

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHH
Q psy10762          4 TGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNH   83 (126)
Q Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h   83 (126)
                      .++++|.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCccC
Q psy10762         84 VRRHTGESPHKC   95 (126)
Q Consensus        84 ~~~~~~~~~~~C   95 (126)
                      +++|.++++|.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999999998864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.91  E-value=1.6e-24  Score=111.64  Aligned_cols=82  Identities=41%  Similarity=0.840  Sum_probs=69.5

Q ss_pred             CcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHh
Q psy10762         36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        36 ~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  115 (126)
                      +|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            46788888888888888888888888888888888888888888888888888888899999999999988999998888


Q ss_pred             hh
Q psy10762        116 TV  117 (126)
Q Consensus       116 ~~  117 (126)
                      ++
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=6.7e-24  Score=112.37  Aligned_cols=92  Identities=38%  Similarity=0.734  Sum_probs=87.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHH
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLV   81 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~   81 (126)
                      .+.++++|.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCc
Q psy10762         82 NHVRRHTGESPH   93 (126)
Q Consensus        82 ~h~~~~~~~~~~   93 (126)
                      .|+++|++++..
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999987754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.90  E-value=1.4e-25  Score=122.56  Aligned_cols=104  Identities=20%  Similarity=0.308  Sum_probs=88.8

Q ss_pred             hhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhh--hcCCCCcc-cCCCCCcC--CChhhHHHHHHhhcCCCCccC
Q psy10762         21 KEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ--HTGETPFP-CQYCPKAF--TRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        21 ~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~--~~~~~~~~-C~~C~~~~--~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ...|..|+.+|.++++|.|+.|++.|.....|..|++.  +.+.+++. |+.|++.|  .....|..|+++|.++++|.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            34567788888888999999999999999999999988  66666554 99999988  888999999999999999999


Q ss_pred             cccccccCCHHHHHHHHHHhhhccccCCC
Q psy10762         96 TYCMKSFTRKEHLTNHIRQHTVRRVNDLP  124 (126)
Q Consensus        96 ~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  124 (126)
                      .+|++.|...+.|.+|+++|+.......|
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            99999999999999999998766554433

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.90  E-value=1.1e-23  Score=110.20  Aligned_cols=87  Identities=38%  Similarity=0.842  Sum_probs=80.9

Q ss_pred             CCcceecc--ccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHH
Q psy10762          5 GETPHRCD--YCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN   82 (126)
Q Consensus         5 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~   82 (126)
                      |+++|.|.  .|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            57899998  6999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCC
Q psy10762         83 HVRRHTGES   91 (126)
Q Consensus        83 h~~~~~~~~   91 (126)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999998875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.90  E-value=1e-23  Score=114.23  Aligned_cols=86  Identities=36%  Similarity=0.700  Sum_probs=60.1

Q ss_pred             hcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHH
Q psy10762         31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN  110 (126)
Q Consensus        31 h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~  110 (126)
                      |.++++|.| .|+..|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|.+
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            445555666 5666666666666666666666667777777777777777777777777777777777777777777777


Q ss_pred             HHHHhhh
Q psy10762        111 HIRQHTV  117 (126)
Q Consensus       111 H~~~h~~  117 (126)
                      |+++|+.
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            7777664

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.4e-23  Score=110.01  Aligned_cols=86  Identities=40%  Similarity=0.785  Sum_probs=60.4

Q ss_pred             CCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCC--CCccCcccccccCCHHHHHH
Q psy10762         33 GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE--SPHKCTYCMKSFTRKEHLTN  110 (126)
Q Consensus        33 ~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~--~~~~C~~C~~~f~~~~~l~~  110 (126)
                      ++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++  ++|.|.+|++.|.....|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            3455666666666666666666666666666777777777777777777777777665  77888888888888888888


Q ss_pred             HHH-Hhhhc
Q psy10762        111 HIR-QHTVR  118 (126)
Q Consensus       111 H~~-~h~~~  118 (126)
                      |++ +|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            875 56543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.8e-23  Score=112.85  Aligned_cols=90  Identities=18%  Similarity=0.315  Sum_probs=56.3

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHH
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHL  108 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l  108 (126)
                      .+|.++++|.|+.|+..|.....|..|++.|.  ++|.|+.|++.|.....|..|+. |.++++|.|.+|++.|.....|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            34455556666666666666666666666552  45666666666666666666664 6666666666666666666666


Q ss_pred             HHHHH-Hhhhcccc
Q psy10762        109 TNHIR-QHTVRRVN  121 (126)
Q Consensus       109 ~~H~~-~h~~~~~~  121 (126)
                      .+|++ +|++++..
T Consensus        86 ~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           86 WRHQVEVHNQNNMA   99 (107)
T ss_dssp             HHHHHHTSCCCCCC
T ss_pred             HHHHHHHcCCCCCC
Confidence            66665 56555443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.2e-23  Score=113.44  Aligned_cols=92  Identities=16%  Similarity=0.276  Sum_probs=86.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHH
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLV   81 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~   81 (126)
                      +|+++++|.|..|++.|.....|..|+..|.  ++|.|+.|++.|.....|..|+. |.++++|.|+.|++.|.....|.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            5788999999999999999999999999984  58999999999999999999996 99999999999999999999999


Q ss_pred             HHHH-hhcCCCCccCc
Q psy10762         82 NHVR-RHTGESPHKCT   96 (126)
Q Consensus        82 ~h~~-~~~~~~~~~C~   96 (126)
                      .|++ .|.++++|.+.
T Consensus        87 ~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           87 RHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHTSCCCCCCCCC
T ss_pred             HHHHHHcCCCCCCCCC
Confidence            9997 89999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.89  E-value=5.8e-23  Score=105.73  Aligned_cols=82  Identities=41%  Similarity=0.847  Sum_probs=78.8

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhh
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH   87 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~   87 (126)
                      ||.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q psy10762         88 TG   89 (126)
Q Consensus        88 ~~   89 (126)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.89  E-value=1e-22  Score=110.31  Aligned_cols=87  Identities=36%  Similarity=0.676  Sum_probs=83.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHH
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLV   81 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~   81 (126)
                      .|+++++|.| .|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5889999999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcC
Q psy10762         82 NHVRRHTG   89 (126)
Q Consensus        82 ~h~~~~~~   89 (126)
                      .|++.+..
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99998753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=1.1e-22  Score=111.53  Aligned_cols=92  Identities=39%  Similarity=0.864  Sum_probs=86.7

Q ss_pred             cCCCCcccCC--cccccCCchHHHHHHhhhcCCCCcccC--CCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHH
Q psy10762         32 TGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEH  107 (126)
Q Consensus        32 ~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~  107 (126)
                      .++++|.|+.  |+..|.....|..|++.|.++++|.|+  .|++.|.+...|..|++.|.++++|.|.+|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4567899997  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccccCC
Q psy10762        108 LTNHIRQHTVRRVNDL  123 (126)
Q Consensus       108 l~~H~~~h~~~~~~~~  123 (126)
                      |..|+++|++++...+
T Consensus        82 l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHHTCCCEEC
T ss_pred             HHHHHHHhcCCCCeeC
Confidence            9999999999877655

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.6e-22  Score=106.01  Aligned_cols=88  Identities=42%  Similarity=0.857  Sum_probs=82.5

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCC--CCcccCCCCCcCCChhhH
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE--TPFPCQYCPKAFTRKDHL   80 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~--~~~~C~~C~~~~~~~~~l   80 (126)
                      .+++++|.|..|++.|.....|..|+..|.++++|.|+.|+..|.....|..|++.|.++  ++|.|+.|++.|.....|
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            367899999999999999999999999999999999999999999999999999999987  899999999999999999


Q ss_pred             HHHHH-hhcCC
Q psy10762         81 VNHVR-RHTGE   90 (126)
Q Consensus        81 ~~h~~-~~~~~   90 (126)
                      ..|++ .|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99986 67654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.88  E-value=2.7e-23  Score=100.46  Aligned_cols=58  Identities=31%  Similarity=0.710  Sum_probs=53.5

Q ss_pred             CCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        62 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++||.|..|++.|.....|..|+++|+++++|.|.+|++.|...+.|.+|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999998764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=3.4e-22  Score=110.20  Aligned_cols=92  Identities=35%  Similarity=0.654  Sum_probs=85.1

Q ss_pred             cCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHh---hcCCCCccCcccccccCCHHHH
Q psy10762         32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRR---HTGESPHKCTYCMKSFTRKEHL  108 (126)
Q Consensus        32 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~f~~~~~l  108 (126)
                      .++++|.|+.|+..|.....|..|++.|.++++|.|+.|++.|.+...|..|+..   +.++++|.|.+|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4567899999999999999999999999999999999999999999999999996   5678999999999999999999


Q ss_pred             HHHHHHhhhccccCC
Q psy10762        109 TNHIRQHTVRRVNDL  123 (126)
Q Consensus       109 ~~H~~~h~~~~~~~~  123 (126)
                      ..|+++|++++...+
T Consensus        83 ~~H~~~h~~~~~~~C   97 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKC   97 (124)
T ss_dssp             HHHHHHHSSSCSEEC
T ss_pred             HHHHHHcCCCCCccC
Confidence            999999998876544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=1.5e-22  Score=115.68  Aligned_cols=88  Identities=38%  Similarity=0.809  Sum_probs=85.3

Q ss_pred             eeccccccccCChhHHHHHHHhhcCCCCcccCC--cccccCCchHHHHHHhhhcCCCCcccCC--CCCcCCChhhHHHHH
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHV   84 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~   84 (126)
                      |.|..|++.|.....|..|+..|.++++|.|+.  |+..|.....|..|++.|.++++|.|+.  |++.|.....|..|+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence            899999999999999999999999999999998  9999999999999999999999999997  999999999999999


Q ss_pred             HhhcCCCCccCc
Q psy10762         85 RRHTGESPHKCT   96 (126)
Q Consensus        85 ~~~~~~~~~~C~   96 (126)
                      ++|+++++|.|.
T Consensus       143 ~~H~~~k~~~c~  154 (155)
T 2rpc_A          143 HVHTSDKSGPSS  154 (155)
T ss_dssp             TTTTSCCCSCSC
T ss_pred             HHhcCCCCCCCC
Confidence            999999999885

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.87  E-value=6.1e-22  Score=105.45  Aligned_cols=84  Identities=42%  Similarity=0.904  Sum_probs=71.4

Q ss_pred             CCCcccCC--cccccCCchHHHHHHhhhcCCCCcccC--CCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHH
Q psy10762         34 ESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLT  109 (126)
Q Consensus        34 ~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~  109 (126)
                      .++|.|..  |+..|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|.++++|.|.+|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            45677875  888888888888888888888888886  58888988888999998888888999999999999999999


Q ss_pred             HHHHHhhh
Q psy10762        110 NHIRQHTV  117 (126)
Q Consensus       110 ~H~~~h~~  117 (126)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99988863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=1.5e-22  Score=110.45  Aligned_cols=96  Identities=21%  Similarity=0.390  Sum_probs=85.1

Q ss_pred             CCCCCCcceeccccccccCChhHHHHHHHh--hcCCCCc-ccCCccccc--CCchHHHHHHhhhcCCCCcccCCCCCcCC
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQ--HTGESPH-HCNYCAKSF--TRKDHMVYHERQHTGETPFPCQYCPKAFT   75 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~--h~~~~~~-~c~~C~~~~--~~~~~l~~h~~~~~~~~~~~C~~C~~~~~   75 (126)
                      ++|+++++|.|.+|++.|.....|..|+..  |...+++ .|+.|+..|  .....|..|+++|.++++|.|+.|++.|.
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~   91 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFE   91 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCS
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccC
Confidence            368899999999999999999999999998  6655554 499999998  88899999999999999999999999999


Q ss_pred             ChhhHHHHHHhhcCCCCccCc
Q psy10762         76 RKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        76 ~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      ....|..|++.+........+
T Consensus        92 ~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           92 SLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SHHHHHHHHHHTTTTTCSCCC
T ss_pred             CHHHHHHHHHHhCCcccCCCC
Confidence            999999999998776655443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.87  E-value=3.6e-22  Score=104.23  Aligned_cols=82  Identities=41%  Similarity=0.950  Sum_probs=66.1

Q ss_pred             CCcccCC--cccccCCchHHHHHHhhhcCCCCcccC--CCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHH
Q psy10762         35 SPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN  110 (126)
Q Consensus        35 ~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~  110 (126)
                      .+|.|+.  |+..|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|...+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            4577777  777777777777787777777888886  588888888888888888888888888888888888888888


Q ss_pred             HHHHhh
Q psy10762        111 HIRQHT  116 (126)
Q Consensus       111 H~~~h~  116 (126)
                      |+++|.
T Consensus        84 H~~~H~   89 (89)
T 2wbs_A           84 HMKRHF   89 (89)
T ss_dssp             HGGGGC
T ss_pred             HHHhhC
Confidence            888763

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=4.9e-22  Score=109.66  Aligned_cols=89  Identities=34%  Similarity=0.706  Sum_probs=80.9

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCcccCC--cccccCCchHHHHHHhhhcCCCCcccC--CCCCcCCChhhH
Q psy10762          5 GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQ--YCPKAFTRKDHL   80 (126)
Q Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l   80 (126)
                      ++++|.|..|++.|.....|..|+..|.++++|.|+.  |+..|.....|..|+++|.++++|.|+  .|++.|.+...|
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  110 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL  110 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHH
Confidence            7789999999999999999999999999999999986  999999999999999999999999996  599999999999


Q ss_pred             HHHHHhhcCCCCc
Q psy10762         81 VNHVRRHTGESPH   93 (126)
Q Consensus        81 ~~h~~~~~~~~~~   93 (126)
                      ..|+++|++++++
T Consensus       111 ~~H~~~H~~~k~~  123 (124)
T 1ubd_C          111 KSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHC-----
T ss_pred             HHHHHHHcccccC
Confidence            9999999998875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.84  E-value=2.4e-20  Score=99.23  Aligned_cols=85  Identities=45%  Similarity=0.938  Sum_probs=80.0

Q ss_pred             CCcceeccc--cccccCChhHHHHHHHhhcCCCCcccC--CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhH
Q psy10762          5 GETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHL   80 (126)
Q Consensus         5 ~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l   80 (126)
                      ..++|.|..  |++.|.....|..|+..|.++++|.|+  .|+..|.....|..|++.|.++++|.|+.|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            457899996  999999999999999999999999997  5999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcC
Q psy10762         81 VNHVRRHTG   89 (126)
Q Consensus        81 ~~h~~~~~~   89 (126)
                      ..|+++|.+
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999999864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.84  E-value=6e-22  Score=103.31  Aligned_cols=83  Identities=30%  Similarity=0.589  Sum_probs=72.5

Q ss_pred             CCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHH
Q psy10762         34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        34 ~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  113 (126)
                      +++|.|+.|+..|.....|..|+++|.++++|.|+.|++.|.....|..|++.+.+ .+|.|..|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            35788888888888888888888888888899999999999999999999988874 78999999999999999999988


Q ss_pred             Hhhh
Q psy10762        114 QHTV  117 (126)
Q Consensus       114 ~h~~  117 (126)
                      .+++
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.84  E-value=1.3e-20  Score=98.21  Aligned_cols=83  Identities=51%  Similarity=1.032  Sum_probs=78.8

Q ss_pred             Ccceeccc--cccccCChhHHHHHHHhhcCCCCcccC--CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHH
Q psy10762          6 ETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLV   81 (126)
Q Consensus         6 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~   81 (126)
                      .++|.|..  |++.|.....|..|+..|.++++|.|+  .|+..|.....|..|++.|.++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy10762         82 NHVRRHT   88 (126)
Q Consensus        82 ~h~~~~~   88 (126)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9998873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.83  E-value=5.7e-21  Score=92.27  Aligned_cols=57  Identities=32%  Similarity=0.685  Sum_probs=37.6

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCC
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE   62 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~   62 (126)
                      |+||.|.+|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|.|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            566666666666666666666666666666666666666666666666666666654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.83  E-value=1.1e-20  Score=97.65  Aligned_cols=78  Identities=24%  Similarity=0.509  Sum_probs=66.0

Q ss_pred             Cccc--CCcccccCCchHHHHHHhhhcCCCCcccCC--CCCcCCChhhHHHHHHhhcCCCCccCcc---cccccCCHHHH
Q psy10762         36 PHHC--NYCAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY---CMKSFTRKEHL  108 (126)
Q Consensus        36 ~~~c--~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~---C~~~f~~~~~l  108 (126)
                      ||.|  +.|+..|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++   |.|..   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4677  778888888888888888888888888877  88888888888888888877   88888   99999999999


Q ss_pred             HHHHHHhh
Q psy10762        109 TNHIRQHT  116 (126)
Q Consensus       109 ~~H~~~h~  116 (126)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99988875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.83  E-value=3.7e-22  Score=110.93  Aligned_cols=114  Identities=16%  Similarity=0.198  Sum_probs=88.0

Q ss_pred             CCCCCCcceeccccccccCChhHHHHHHHhh---cCCCCcccCCcccccC------CchHHHHHHhhhcCCCCcccCCCC
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQH---TGESPHHCNYCAKSFT------RKDHMVYHERQHTGETPFPCQYCP   71 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h---~~~~~~~c~~C~~~~~------~~~~l~~h~~~~~~~~~~~C~~C~   71 (126)
                      |+++|.++|.|...+.....  .+..+...+   ..++.+.|+.|+..|.      ....|..|+ .|.+++||.|+.|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTC
T ss_pred             hhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCC
Confidence            57889999988765544322  233342222   2234567777776655      445566665 68899999999999


Q ss_pred             CcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         72 KAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        72 ~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +.|.....|..|+++|  +++|.|..|++.|...+.|.+|+++|++..
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            9999999999999998  899999999999999999999999998764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=2.1e-20  Score=99.24  Aligned_cols=76  Identities=17%  Similarity=0.187  Sum_probs=63.1

Q ss_pred             cCCchHHHHHHhhhcCCCCcccCCCCCcCC-ChhhHHHHHHhhcC-CCCccCcccccccCCHHHHHHHHHHhhhcccc
Q psy10762         46 FTRKDHMVYHERQHTGETPFPCQYCPKAFT-RKDHLVNHVRRHTG-ESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        46 ~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~-~~~~l~~h~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  121 (126)
                      +.....+..|+++|.++++|.|+.|++.|. ....|..|+++|.+ +++|.|.+|++.|.....|.+|+++|++++..
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            444555677888888888888888888888 88888888888887 88889988999999988999998888877654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.5e-19  Score=92.28  Aligned_cols=70  Identities=27%  Similarity=0.647  Sum_probs=35.6

Q ss_pred             CCcceeccc--cccccCChhHHHHHHH-hhcCCCCcccCC--cccccCCchHHHHHHhhhcCCCCcccCCCCCcC
Q psy10762          5 GETPHRCDY--CAKTFTRKEHLVNHVR-QHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAF   74 (126)
Q Consensus         5 ~~~~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~   74 (126)
                      ++++|.|..  |++.|.....|..|+. .|.++++|.|+.  |++.|.....|..|+++|.++++|.|+.|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            444555543  5555555555555555 354445555554  555555555555555555544455555554443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.2e-19  Score=91.04  Aligned_cols=72  Identities=28%  Similarity=0.622  Sum_probs=67.5

Q ss_pred             cCCCCcccCC--cccccCCchHHHHHHh-hhcCCCCcccCC--CCCcCCChhhHHHHHHhhcCCCCccCcccccccC
Q psy10762         32 TGESPHHCNY--CAKSFTRKDHMVYHER-QHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFT  103 (126)
Q Consensus        32 ~~~~~~~c~~--C~~~~~~~~~l~~h~~-~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~  103 (126)
                      +++++|.|..  |+..|.....|..|++ .|.++++|.|+.  |++.|.....|..|+++|+++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567889987  9999999999999999 799999999998  9999999999999999999999999999999984

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=5.2e-19  Score=93.41  Aligned_cols=74  Identities=12%  Similarity=0.205  Sum_probs=65.7

Q ss_pred             cccCCchHHHHHHhhhcCCCCcccCCCCCcC-CChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHH-HHHhhhc
Q psy10762         44 KSFTRKDHMVYHERQHTGETPFPCQYCPKAF-TRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH-IRQHTVR  118 (126)
Q Consensus        44 ~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~-~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  118 (126)
                      ..+.....+..|+..+.++++|.|+.|++.| .....|..|+++| ++++|.|.+|++.|...+.|..| +++|+++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3566777788888889999999999999999 8999999999999 99999999999999999999999 8888754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.79  E-value=1e-20  Score=98.62  Aligned_cols=82  Identities=32%  Similarity=0.653  Sum_probs=77.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHH
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVR   85 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~   85 (126)
                      +++|.|..|++.|.....|..|+.+|.++++|.|+.|+..|.....|..|+..+++ .+|.|+.|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            57899999999999999999999999999999999999999999999999999886 68999999999999999999998


Q ss_pred             hhc
Q psy10762         86 RHT   88 (126)
Q Consensus        86 ~~~   88 (126)
                      ...
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=9.1e-20  Score=94.46  Aligned_cols=78  Identities=28%  Similarity=0.491  Sum_probs=49.3

Q ss_pred             HHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCC----CCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccc
Q psy10762         25 VNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE----TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMK  100 (126)
Q Consensus        25 ~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~----~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  100 (126)
                      ..|+++|.++++|.|+.|++.|.....|..|++.+++.    ++|.|+.|++.|.....|..|+++|.+++++.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            34555666666666666666666666666666555543    56666666666666666666666666666666666665


Q ss_pred             cc
Q psy10762        101 SF  102 (126)
Q Consensus       101 ~f  102 (126)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.78  E-value=5.3e-19  Score=91.28  Aligned_cols=78  Identities=28%  Similarity=0.571  Sum_probs=74.3

Q ss_pred             ceec--cccccccCChhHHHHHHHhhcCCCCcccCC--cccccCCchHHHHHHhhhcCCCCcccCC---CCCcCCChhhH
Q psy10762          8 PHRC--DYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY---CPKAFTRKDHL   80 (126)
Q Consensus         8 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~---C~~~~~~~~~l   80 (126)
                      ||.|  +.|++.|.....|..|+.+|.++++|.|+.  |++.|.....|..|+++|.+   |.|+.   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6899  999999999999999999999999999998  99999999999999999998   99999   99999999999


Q ss_pred             HHHHHhhc
Q psy10762         81 VNHVRRHT   88 (126)
Q Consensus        81 ~~h~~~~~   88 (126)
                      ..|+++++
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=5.4e-19  Score=88.70  Aligned_cols=65  Identities=46%  Similarity=0.776  Sum_probs=59.4

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      .++|.++++|.|+.|++.|.....|..|+++|.++++|.|.+|++.|.....|.+|+++|+++..
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            35678899999999999999999999999999999999999999999999999999999987643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=7.2e-19  Score=87.77  Aligned_cols=65  Identities=23%  Similarity=0.451  Sum_probs=58.4

Q ss_pred             hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccccC
Q psy10762         58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVND  122 (126)
Q Consensus        58 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  122 (126)
                      .+.++++|.|+.|++.|.....|..|+++|.++++|.|.+|++.|.....|.+|+++|++++...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            35678899999999999999999999999999999999999999999999999999999876543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.77  E-value=1.4e-18  Score=87.66  Aligned_cols=63  Identities=32%  Similarity=0.688  Sum_probs=54.9

Q ss_pred             hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        58 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      .+.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|+++|++++.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            456778899999999999999999999999998999999999999999999999999887753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.5e-18  Score=88.16  Aligned_cols=64  Identities=39%  Similarity=0.805  Sum_probs=43.1

Q ss_pred             cCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        32 ~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      .++++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455666666666666666666666666666667777777777666677777766666666665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=4.1e-18  Score=88.15  Aligned_cols=74  Identities=30%  Similarity=0.517  Sum_probs=68.3

Q ss_pred             CCCCCCcceeccccccccCChhHHHHHHHhhcCC----CCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcC
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE----SPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAF   74 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~----~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~   74 (126)
                      ++|+++++|.|..|++.|.....|..|+..+...    ++|.|+.|++.|.....|..|++.+.+++++.|..|+..+
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            3688999999999999999999999999877654    6899999999999999999999999999999999998764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.76  E-value=1.4e-18  Score=83.29  Aligned_cols=57  Identities=37%  Similarity=0.709  Sum_probs=49.4

Q ss_pred             CCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         61 GETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        61 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      |+++|.|+.|++.|.+...|..|+++|+++++|.|.+|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999999999999998863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=3e-18  Score=87.02  Aligned_cols=64  Identities=38%  Similarity=0.689  Sum_probs=50.2

Q ss_pred             hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcccc
Q psy10762         58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        58 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  121 (126)
                      .+.++++|.|+.|++.|.....|..|+++|.++++|.|.+|++.|.....|.+|+++|++++..
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3456677888888888888888888888888888888888888888888888888888776654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.74  E-value=1.3e-18  Score=89.58  Aligned_cols=62  Identities=24%  Similarity=0.449  Sum_probs=55.1

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHH-HHhhhc
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI-RQHTVR  118 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  118 (126)
                      ..+.+.++|.|+.|++.|.+...|..|+++|+++++|.|.+|++.|...+.|.+|+ ++|+++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            45567788999999999999999999999999999999999999999999999997 457654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.74  E-value=5.6e-18  Score=85.40  Aligned_cols=63  Identities=37%  Similarity=0.782  Sum_probs=37.7

Q ss_pred             hcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCc
Q psy10762         31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH   93 (126)
Q Consensus        31 h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~   93 (126)
                      +.++++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            344455666666666666666666666666666666666666666666666666666665554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.1e-18  Score=91.05  Aligned_cols=66  Identities=26%  Similarity=0.356  Sum_probs=38.3

Q ss_pred             CCCcceeccccccccCChhHHHHHHH-hh---cCCCCcccCCcccccCCchHHHHH-HhhhcCCCCcccCC
Q psy10762          4 TGETPHRCDYCAKTFTRKEHLVNHVR-QH---TGESPHHCNYCAKSFTRKDHMVYH-ERQHTGETPFPCQY   69 (126)
Q Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~h~~-~h---~~~~~~~c~~C~~~~~~~~~l~~h-~~~~~~~~~~~C~~   69 (126)
                      +|+++|.|..|++.|.....|..|+. .|   .++++|.|+.|++.|.....|..| +++|.+++||.|..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            35566666666666666666666654 35   334555666666666555555555 55555555555554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=8.1e-19  Score=89.15  Aligned_cols=67  Identities=28%  Similarity=0.575  Sum_probs=57.9

Q ss_pred             HHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHH-hhcCC-CCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         52 MVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVR-RHTGE-SPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        52 l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +..|+++|.++++|.|+.|++.|.....|..|++ .|.++ ++|.|.+|++.|.....|..|+++++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3457788999999999999999999999999997 57664 7899999999999999999999986643

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=2.6e-18  Score=84.76  Aligned_cols=61  Identities=26%  Similarity=0.634  Sum_probs=55.1

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHh-h-cCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRR-H-TGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~-~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ++|.++++|.|+.|++.|.....|..|++. | .++++|.|..|++.|...+.|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            467788999999999999999999999988 6 588999999999999999999999998875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.73  E-value=7.4e-18  Score=80.75  Aligned_cols=56  Identities=32%  Similarity=0.663  Sum_probs=50.7

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ||.|+.|++.|.....|..|+++|.++++|.|..|++.|...+.|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58899999999999999999999999999999999999999999999999988764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=2e-18  Score=91.55  Aligned_cols=78  Identities=17%  Similarity=0.185  Sum_probs=69.9

Q ss_pred             cCChhHHHHHHHhhcCCCCcccCCcccccC-CchHHHHHHhhhcC-CCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         18 FTRKEHLVNHVRQHTGESPHHCNYCAKSFT-RKDHMVYHERQHTG-ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        18 f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~-~~~~l~~h~~~~~~-~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      +.....+..|+.+|.++++|.|+.|++.|. ....|..|+++|.+ +++|.|+.|++.|.....|..|+++|++++++..
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            444556778999999999999999999999 99999999999998 8999999999999999999999999999888644

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.6e-17  Score=82.80  Aligned_cols=64  Identities=23%  Similarity=0.505  Sum_probs=50.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF   65 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~   65 (126)
                      .|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|++.|.....|..|++.|++++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            4667788888888888888888888888888777888888888888888888888888777653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=2.7e-17  Score=86.83  Aligned_cols=78  Identities=12%  Similarity=0.196  Sum_probs=70.0

Q ss_pred             ccccCChhHHHHHHHhhcCCCCcccCCccccc-CCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHH-HHhhcCCCC
Q psy10762         15 AKTFTRKEHLVNHVRQHTGESPHHCNYCAKSF-TRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNH-VRRHTGESP   92 (126)
Q Consensus        15 ~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~-~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h-~~~~~~~~~   92 (126)
                      ..+|.....+..|+..+.++++|.|+.|++.| .....|..|+++| ++++|.|..|++.|.....|..| +++|+++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            44667778899999999999999999999999 9999999999999 99999999999999999999999 888876443


Q ss_pred             c
Q psy10762         93 H   93 (126)
Q Consensus        93 ~   93 (126)
                      +
T Consensus        92 ~   92 (96)
T 2ctd_A           92 G   92 (96)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.6e-18  Score=89.81  Aligned_cols=68  Identities=25%  Similarity=0.448  Sum_probs=57.5

Q ss_pred             cCCCCcccCCcccccCCchHHHHHHh-hh---cCCCCcccCCCCCcCCChhhHHHH-HHhhcCCCCccCcccc
Q psy10762         32 TGESPHHCNYCAKSFTRKDHMVYHER-QH---TGETPFPCQYCPKAFTRKDHLVNH-VRRHTGESPHKCTYCM   99 (126)
Q Consensus        32 ~~~~~~~c~~C~~~~~~~~~l~~h~~-~~---~~~~~~~C~~C~~~~~~~~~l~~h-~~~~~~~~~~~C~~C~   99 (126)
                      .++++|.|+.|++.|.....|..|++ .|   .+++||.|..|++.|.....|..| +++|+++++|.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            56778899999999999999999987 47   567889999999999999999999 7889999999887643

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.4e-17  Score=82.04  Aligned_cols=61  Identities=43%  Similarity=0.815  Sum_probs=36.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE   62 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~   62 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|++.|.....|..|+++|.++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4555566666666666666666666666665555566666666666655566665555543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=2.2e-17  Score=83.97  Aligned_cols=63  Identities=22%  Similarity=0.499  Sum_probs=52.8

Q ss_pred             hcCCCCcccCCCCCcCCChhhHHHHHHhhcC---CCCccCcccccccCCHHHHHHHHHH-hhhcccc
Q psy10762         59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTG---ESPHKCTYCMKSFTRKEHLTNHIRQ-HTVRRVN  121 (126)
Q Consensus        59 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~  121 (126)
                      |.++++|.|+.|++.|.....|..|+++|.+   +++|.|.+|++.|.....|.+|++. |.++...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5678899999999999999999999998885   7899999999999999999999854 5554443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.9e-17  Score=78.62  Aligned_cols=56  Identities=39%  Similarity=0.842  Sum_probs=50.0

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHH-HHhhhc
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI-RQHTVR  118 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  118 (126)
                      +||.|+.|++.|.....|..|+++|+++++|.|..|++.|.+.+.|.+|+ ++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999999999999999999999999997 567654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=1.3e-17  Score=92.43  Aligned_cols=82  Identities=20%  Similarity=0.283  Sum_probs=71.2

Q ss_pred             CcceeccccccccC------ChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhh
Q psy10762          6 ETPHRCDYCAKTFT------RKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDH   79 (126)
Q Consensus         6 ~~~~~C~~C~~~f~------~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~   79 (126)
                      ++.+.|+.|.+.|.      ....|..|+ .|.++++|.|+.|++.|.....|..|+++|  +++|.|+.|++.|.....
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHH
Confidence            45677888877766      445566666 677889999999999999999999999998  889999999999999999


Q ss_pred             HHHHHHhhcCC
Q psy10762         80 LVNHVRRHTGE   90 (126)
Q Consensus        80 l~~h~~~~~~~   90 (126)
                      |..|+++|++.
T Consensus       116 l~~H~~~h~~~  126 (129)
T 2wbt_A          116 ALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHHHCCc
Confidence            99999999875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=7e-17  Score=81.07  Aligned_cols=59  Identities=44%  Similarity=0.964  Sum_probs=53.5

Q ss_pred             hhcCCCCcccC--CCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         58 QHTGETPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        58 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      ++.++++|.|+  .|++.|.....|..|++.|.++++|.|.+|++.|...+.|.+|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            46678899997  599999999999999999999999999999999999999999998875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=1.7e-16  Score=81.69  Aligned_cols=61  Identities=31%  Similarity=0.628  Sum_probs=42.3

Q ss_pred             hhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHH-HhhcCC
Q psy10762         30 QHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHV-RRHTGE   90 (126)
Q Consensus        30 ~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~-~~~~~~   90 (126)
                      .+...+++.|++|++.|.....|..|+++|.+++||.|+.|++.|.....|..|+ +.|.+|
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3445556777777777777777777777777777777777777777777777775 345554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.66  E-value=1.5e-16  Score=76.08  Aligned_cols=55  Identities=35%  Similarity=0.757  Sum_probs=29.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT   60 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~   60 (126)
                      +++|.|..|++.|.....|..|+.+|.++++|.|+.|+..|.....|..|++.++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4455555555555555555555555555555555555555555555555555443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.1e-16  Score=78.79  Aligned_cols=60  Identities=30%  Similarity=0.571  Sum_probs=42.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHh-h-cCCCCcccCCcccccCCchHHHHHHhhhcC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQ-H-TGESPHHCNYCAKSFTRKDHMVYHERQHTG   61 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h-~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~   61 (126)
                      +|+++++|.|+.|++.|.....|..|+.. | .++++|.|+.|++.|.....|..|++.+++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            46677777777777777777777777766 5 366677777777777777777777766654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=6.7e-16  Score=78.41  Aligned_cols=64  Identities=25%  Similarity=0.496  Sum_probs=49.2

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcC---CCCcccCCcccccCCchHHHHHH-hhhcCCCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTG---ESPHHCNYCAKSFTRKDHMVYHE-RQHTGETPF   65 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~~~~~c~~C~~~~~~~~~l~~h~-~~~~~~~~~   65 (126)
                      .|+++++|.|.+|++.|.....|..|+.+|.+   +++|.|+.|++.|.....|..|+ ..|.+.++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47788888888888888888888888888874   67788888888888888888887 445555443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.62  E-value=9.5e-16  Score=73.26  Aligned_cols=54  Identities=26%  Similarity=0.592  Sum_probs=27.1

Q ss_pred             cccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCC
Q psy10762         37 HHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        37 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      |.|+.|+..|.....|..|+++|.++++|.|+.|++.|.....|..|+++|.++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            444445555555555555555555555555555555555555555555544443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.3e-15  Score=76.26  Aligned_cols=60  Identities=35%  Similarity=0.661  Sum_probs=29.0

Q ss_pred             HHHhhcCCCCcccCCcccccCCchHHHHHHh-hhcCC-CCcccCCCCCcCCChhhHHHHHHh
Q psy10762         27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHER-QHTGE-TPFPCQYCPKAFTRKDHLVNHVRR   86 (126)
Q Consensus        27 h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~-~~~~~-~~~~C~~C~~~~~~~~~l~~h~~~   86 (126)
                      |+++|.++++|.|+.|++.|.....|..|++ .|.++ ++|.|+.|++.|.....|..|++.
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            3444444444555555555555555555543 33332 445555555555555555555544

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=2.7e-16  Score=77.47  Aligned_cols=59  Identities=25%  Similarity=0.553  Sum_probs=50.6

Q ss_pred             hcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc-ccccccCCHHHHHHHHHHhhhcc
Q psy10762         59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT-YCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        59 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ..+.++|.|+.|++.|. ...|..|+++ +++++|.|. .|++.|..++.|..|+++|.+.+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            35677899999999998 8889999988 888999999 89999999889999998887654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=5.6e-15  Score=77.61  Aligned_cols=60  Identities=32%  Similarity=0.509  Sum_probs=43.9

Q ss_pred             cccCCcccccCCchHHHHHHhh-hcCCCC--------cccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         37 HHCNYCAKSFTRKDHMVYHERQ-HTGETP--------FPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        37 ~~c~~C~~~~~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +.|..|++.|.....|..|++. |.++++        |.|+.|++.|.....|..|+++|+++++|.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566666666666666666665 666555        77888888888888888888888888888775

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=8.1e-19  Score=88.15  Aligned_cols=69  Identities=16%  Similarity=0.312  Sum_probs=44.1

Q ss_pred             HHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        23 ~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      .|..|+.+|.++++|.|+.|++.|.....|..       +++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34455566666666666666666666555443       5566777777777666666677766766667766665

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=1.2e-14  Score=76.34  Aligned_cols=60  Identities=35%  Similarity=0.525  Sum_probs=47.7

Q ss_pred             CcccCCCCCcCCChhhHHHHHHh-hcCCCC--------ccCcccccccCCHHHHHHHHHHhhhccccCC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRR-HTGESP--------HKCTYCMKSFTRKEHLTNHIRQHTVRRVNDL  123 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  123 (126)
                      .+.|+.|++.|.....|..|+++ |.++++        |.|.+|++.|.....|.+|+++|++++...+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            46788888888888888888887 777766        7888888888888888888888887776544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=6e-15  Score=71.15  Aligned_cols=49  Identities=41%  Similarity=0.926  Sum_probs=25.9

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHH
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHE   56 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~   56 (126)
                      +|.|..|++.|.....|..|+.+|.++++|.|+.|+..|.....|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555555555555555555555555555553

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.1e-14  Score=72.86  Aligned_cols=57  Identities=40%  Similarity=0.880  Sum_probs=35.5

Q ss_pred             hcCCCCcccC--CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhh
Q psy10762         31 HTGESPHHCN--YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH   87 (126)
Q Consensus        31 h~~~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~   87 (126)
                      +.++++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4455566665  36666666666666666666666666666666666666666666554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1e-16  Score=80.32  Aligned_cols=62  Identities=19%  Similarity=0.403  Sum_probs=57.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      +|.++++|.|..|++.|.....|..       +++|.|+.|+..|.....|..|+++|.++++|.|+.|
T Consensus        12 ~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            6889999999999999999887766       6789999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=72.36  Aligned_cols=57  Identities=35%  Similarity=0.784  Sum_probs=49.6

Q ss_pred             hcCCCCcccCC--CCCcCCChhhHHHHHHhhcCCCCccCcc--cccccCCHHHHHHHHHHh
Q psy10762         59 HTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        59 ~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  115 (126)
                      ....++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567889987  9999999999999999999999999965  999999999999998765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.2e-14  Score=70.48  Aligned_cols=58  Identities=21%  Similarity=0.491  Sum_probs=38.8

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCcccC-CcccccCCchHHHHHHhhhcCCC
Q psy10762          4 TGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN-YCAKSFTRKDHMVYHERQHTGET   63 (126)
Q Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~-~C~~~~~~~~~l~~h~~~~~~~~   63 (126)
                      .++++|.|..|++.|. ...|..|+.+ .++++|.|+ .|++.|.....|..|+++|....
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            3556677777777777 6667777666 666667777 67776666666777766665543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.49  E-value=2.7e-14  Score=67.44  Aligned_cols=46  Identities=39%  Similarity=0.764  Sum_probs=37.4

Q ss_pred             hcCCCCcccCCCCCcCCChhhHHHHHH-hhcCCCCccCcccccccCC
Q psy10762         59 HTGETPFPCQYCPKAFTRKDHLVNHVR-RHTGESPHKCTYCMKSFTR  104 (126)
Q Consensus        59 ~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~C~~C~~~f~~  104 (126)
                      +.++++|.|+.|++.|.....|..|++ +|.++++|.|.+|++.|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            556778888888888888888888876 7888888888888888875

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.49  E-value=1.6e-14  Score=65.95  Aligned_cols=44  Identities=39%  Similarity=0.641  Sum_probs=32.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667777777777777777777777777777777777777765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=66.05  Aligned_cols=44  Identities=36%  Similarity=0.650  Sum_probs=32.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.48  E-value=2e-14  Score=65.69  Aligned_cols=44  Identities=41%  Similarity=0.751  Sum_probs=31.8

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.48  E-value=1.7e-14  Score=65.86  Aligned_cols=44  Identities=25%  Similarity=0.451  Sum_probs=33.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45667777777777777777777777777777777777777765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.8e-14  Score=65.78  Aligned_cols=44  Identities=34%  Similarity=0.602  Sum_probs=32.0

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.2e-14  Score=65.49  Aligned_cols=44  Identities=34%  Similarity=0.580  Sum_probs=31.8

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.3e-14  Score=65.39  Aligned_cols=44  Identities=36%  Similarity=0.551  Sum_probs=31.9

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.2e-14  Score=65.54  Aligned_cols=44  Identities=27%  Similarity=0.462  Sum_probs=32.1

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=65.96  Aligned_cols=44  Identities=34%  Similarity=0.644  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.4e-14  Score=66.18  Aligned_cols=44  Identities=41%  Similarity=0.595  Sum_probs=31.8

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.6e-14  Score=65.35  Aligned_cols=43  Identities=35%  Similarity=0.627  Sum_probs=30.1

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4556667777777777777777777777777777777777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.1e-14  Score=65.55  Aligned_cols=44  Identities=41%  Similarity=0.596  Sum_probs=32.1

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.8e-14  Score=65.75  Aligned_cols=44  Identities=39%  Similarity=0.671  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.4e-14  Score=65.40  Aligned_cols=44  Identities=34%  Similarity=0.597  Sum_probs=30.5

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.4e-14  Score=65.38  Aligned_cols=44  Identities=36%  Similarity=0.674  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.1e-14  Score=65.56  Aligned_cols=44  Identities=39%  Similarity=0.678  Sum_probs=32.4

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45666777777777777777777777777777777777777765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2e-14  Score=65.65  Aligned_cols=44  Identities=39%  Similarity=0.666  Sum_probs=31.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.47  E-value=1.6e-14  Score=65.97  Aligned_cols=44  Identities=34%  Similarity=0.612  Sum_probs=31.8

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.8e-14  Score=65.79  Aligned_cols=44  Identities=41%  Similarity=0.699  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.2e-14  Score=65.47  Aligned_cols=44  Identities=36%  Similarity=0.620  Sum_probs=31.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.47  E-value=1.8e-14  Score=65.76  Aligned_cols=44  Identities=34%  Similarity=0.610  Sum_probs=30.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=65.96  Aligned_cols=44  Identities=36%  Similarity=0.617  Sum_probs=31.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.8e-14  Score=65.80  Aligned_cols=44  Identities=41%  Similarity=0.724  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.9e-14  Score=65.73  Aligned_cols=44  Identities=41%  Similarity=0.742  Sum_probs=30.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.8e-14  Score=65.78  Aligned_cols=44  Identities=34%  Similarity=0.524  Sum_probs=29.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666667777777777776677777766666666766655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.3e-14  Score=65.43  Aligned_cols=44  Identities=39%  Similarity=0.652  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.7e-14  Score=65.92  Aligned_cols=44  Identities=39%  Similarity=0.697  Sum_probs=29.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666667777777777777777777766666666766655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.7e-14  Score=65.17  Aligned_cols=44  Identities=41%  Similarity=0.712  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.46  E-value=2.2e-14  Score=65.52  Aligned_cols=44  Identities=34%  Similarity=0.630  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=2.2e-14  Score=65.49  Aligned_cols=44  Identities=34%  Similarity=0.583  Sum_probs=30.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566667777777777777777777777777777777777665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.5e-14  Score=65.31  Aligned_cols=44  Identities=34%  Similarity=0.577  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34556666777777777777777777777777777777777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2e-14  Score=65.65  Aligned_cols=44  Identities=39%  Similarity=0.670  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44566677777777777777777777777777777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.9e-14  Score=65.72  Aligned_cols=44  Identities=32%  Similarity=0.633  Sum_probs=28.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.4e-14  Score=65.37  Aligned_cols=44  Identities=32%  Similarity=0.498  Sum_probs=30.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=2e-14  Score=65.64  Aligned_cols=44  Identities=32%  Similarity=0.520  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=3.1e-14  Score=65.00  Aligned_cols=44  Identities=32%  Similarity=0.613  Sum_probs=30.8

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34566667777777777777777777777777777777777665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.7e-14  Score=65.18  Aligned_cols=44  Identities=39%  Similarity=0.679  Sum_probs=30.5

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.9e-14  Score=65.69  Aligned_cols=44  Identities=39%  Similarity=0.680  Sum_probs=29.9

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666677777777777777777777777777777776655

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.45  E-value=3.7e-14  Score=64.75  Aligned_cols=44  Identities=32%  Similarity=0.540  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34566677777777777777777777777777777777777665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=3.3e-14  Score=64.89  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=29.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34556666667777777777777777777777776677766655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3e-14  Score=65.03  Aligned_cols=44  Identities=27%  Similarity=0.356  Sum_probs=30.0

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666677777777777777777777777777777776655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.2e-14  Score=65.51  Aligned_cols=44  Identities=34%  Similarity=0.576  Sum_probs=30.1

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44556666777777777777777777777777777777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3e-14  Score=65.02  Aligned_cols=44  Identities=36%  Similarity=0.656  Sum_probs=29.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666667777777777777777777777766677766655

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.8e-14  Score=64.68  Aligned_cols=43  Identities=33%  Similarity=0.516  Sum_probs=29.0

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4556666667777777777776777777777766667766655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.2e-14  Score=65.50  Aligned_cols=44  Identities=39%  Similarity=0.688  Sum_probs=32.1

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5.7e-14  Score=64.34  Aligned_cols=44  Identities=36%  Similarity=0.640  Sum_probs=31.5

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHH-hhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVR-RHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|++ +|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4556667777777777777777777777777 7777777777665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=4.3e-14  Score=64.52  Aligned_cols=44  Identities=39%  Similarity=0.674  Sum_probs=28.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.43  E-value=2.4e-13  Score=64.11  Aligned_cols=45  Identities=33%  Similarity=0.685  Sum_probs=28.6

Q ss_pred             CCCCcceeccccccccCChhHHHHHHH-hhcCCCCcccCCcccccC
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVR-QHTGESPHHCNYCAKSFT   47 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~C~~~~~   47 (126)
                      ++++++|.|.+|++.|.....|..|+. +|.++++|.|++|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            455666666666666666666666664 566666666666666654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.42  E-value=4.6e-14  Score=66.65  Aligned_cols=49  Identities=16%  Similarity=0.310  Sum_probs=39.2

Q ss_pred             CcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         72 KAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        72 ~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      +.|.....|..|+++|+++++|.|.+|++.|...+.|..|+++|++++.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            4566677777888888888888888888888888888888888887654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=7.9e-14  Score=63.62  Aligned_cols=44  Identities=41%  Similarity=0.721  Sum_probs=28.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666543

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=2.7e-13  Score=61.51  Aligned_cols=42  Identities=31%  Similarity=0.569  Sum_probs=32.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCA   43 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~   43 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            567777788888888877777777777777777777777775

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=3.5e-13  Score=60.82  Aligned_cols=41  Identities=32%  Similarity=0.565  Sum_probs=29.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.41  E-value=4.5e-13  Score=66.80  Aligned_cols=52  Identities=40%  Similarity=0.887  Sum_probs=25.2

Q ss_pred             Ccceeccc--cccccCChhHHHHHHHhhcCCCCcccCC--cccccCCchHHHHHHh
Q psy10762          6 ETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHER   57 (126)
Q Consensus         6 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~~~l~~h~~   57 (126)
                      .++|.|..  |++.|.....|..|+..|.++++|.|+.  |++.|.....|..|++
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            34455544  5555555555555555554444455532  4444444444444443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.1e-13  Score=61.13  Aligned_cols=41  Identities=44%  Similarity=0.809  Sum_probs=23.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555566666666666666556666555555555555544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.2e-13  Score=61.13  Aligned_cols=41  Identities=34%  Similarity=0.629  Sum_probs=23.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|++|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45555566666666666665556666655555555555544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.40  E-value=4.1e-13  Score=61.19  Aligned_cols=42  Identities=36%  Similarity=0.631  Sum_probs=20.1

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.3e-13  Score=60.78  Aligned_cols=41  Identities=39%  Similarity=0.649  Sum_probs=24.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45555666666666666666666666666665556655544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4e-13  Score=61.22  Aligned_cols=41  Identities=32%  Similarity=0.606  Sum_probs=23.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|+.|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45555555565565555555555555555555555555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.8e-13  Score=60.93  Aligned_cols=41  Identities=41%  Similarity=0.717  Sum_probs=23.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4e-13  Score=61.19  Aligned_cols=41  Identities=39%  Similarity=0.668  Sum_probs=23.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.39  E-value=5e-13  Score=60.90  Aligned_cols=40  Identities=43%  Similarity=0.760  Sum_probs=20.2

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY   41 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   41 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444555555555555555555555555555555555444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.1e-13  Score=61.18  Aligned_cols=41  Identities=37%  Similarity=0.647  Sum_probs=20.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.7e-13  Score=61.32  Aligned_cols=41  Identities=39%  Similarity=0.566  Sum_probs=22.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.7e-13  Score=61.33  Aligned_cols=40  Identities=30%  Similarity=0.502  Sum_probs=19.4

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      |+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4444445555555555444444445444444444444433

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=5e-13  Score=60.87  Aligned_cols=41  Identities=32%  Similarity=0.613  Sum_probs=24.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.39  E-value=5.7e-13  Score=60.69  Aligned_cols=41  Identities=34%  Similarity=0.546  Sum_probs=26.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.7e-13  Score=60.97  Aligned_cols=41  Identities=37%  Similarity=0.589  Sum_probs=22.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|++|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555543

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.4e-13  Score=61.07  Aligned_cols=41  Identities=39%  Similarity=0.634  Sum_probs=23.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.39  E-value=4.9e-13  Score=60.90  Aligned_cols=41  Identities=37%  Similarity=0.626  Sum_probs=22.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.6e-13  Score=60.70  Aligned_cols=41  Identities=41%  Similarity=0.661  Sum_probs=23.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|+.|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.3e-13  Score=60.53  Aligned_cols=40  Identities=35%  Similarity=0.591  Sum_probs=21.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY   41 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   41 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3455555555555555555555555555555555555544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=6.1e-13  Score=60.58  Aligned_cols=41  Identities=22%  Similarity=0.365  Sum_probs=24.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666566665544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.3e-13  Score=60.51  Aligned_cols=41  Identities=44%  Similarity=0.717  Sum_probs=21.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|++|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5e-13  Score=60.87  Aligned_cols=41  Identities=34%  Similarity=0.499  Sum_probs=21.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5e-13  Score=60.85  Aligned_cols=41  Identities=37%  Similarity=0.589  Sum_probs=20.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            34445555555555555555555555555554445544443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.9e-13  Score=60.61  Aligned_cols=39  Identities=41%  Similarity=0.624  Sum_probs=19.1

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCC
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY   41 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   41 (126)
                      |+++++|.|+.|++.|.....|..|+.+|.++++|.|+.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            444444555555555554444555544444444444443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5e-13  Score=60.88  Aligned_cols=41  Identities=41%  Similarity=0.667  Sum_probs=26.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=2.9e-13  Score=61.41  Aligned_cols=42  Identities=33%  Similarity=0.631  Sum_probs=29.5

Q ss_pred             hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccc
Q psy10762         58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCM   99 (126)
Q Consensus        58 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   99 (126)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            455666777777777777777777777777777777777664

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.4e-13  Score=61.05  Aligned_cols=42  Identities=38%  Similarity=0.634  Sum_probs=20.9

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            344444455555555555555555555555555555555443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.8e-13  Score=60.63  Aligned_cols=41  Identities=44%  Similarity=0.749  Sum_probs=24.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45555666666666666666666666666665556655544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.5e-13  Score=60.72  Aligned_cols=42  Identities=33%  Similarity=0.557  Sum_probs=20.1

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.3e-13  Score=60.79  Aligned_cols=41  Identities=41%  Similarity=0.672  Sum_probs=23.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555556666666666665556666555555555555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.4e-13  Score=60.78  Aligned_cols=41  Identities=34%  Similarity=0.488  Sum_probs=24.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45556666666666666666666666666666666666554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.3e-13  Score=61.13  Aligned_cols=41  Identities=34%  Similarity=0.549  Sum_probs=21.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.3e-13  Score=60.77  Aligned_cols=41  Identities=44%  Similarity=0.722  Sum_probs=21.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.38  E-value=4.5e-13  Score=61.04  Aligned_cols=42  Identities=24%  Similarity=0.454  Sum_probs=20.8

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            344444455555555555555555555555555555555443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.3e-13  Score=60.51  Aligned_cols=41  Identities=32%  Similarity=0.532  Sum_probs=22.2

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.38  E-value=4.9e-13  Score=60.88  Aligned_cols=41  Identities=41%  Similarity=0.613  Sum_probs=20.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.5e-13  Score=60.75  Aligned_cols=41  Identities=37%  Similarity=0.595  Sum_probs=23.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|+.|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.8e-13  Score=60.64  Aligned_cols=41  Identities=34%  Similarity=0.459  Sum_probs=23.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|+.|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555566666666666666666666655555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.8e-13  Score=60.93  Aligned_cols=41  Identities=37%  Similarity=0.580  Sum_probs=25.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|++|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.4e-13  Score=60.77  Aligned_cols=40  Identities=40%  Similarity=0.600  Sum_probs=20.0

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      |+++++|.|..|++.|.....|..|+.+|.++++|.|+.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444555555555555555555555555554445544443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.38  E-value=5.8e-13  Score=60.62  Aligned_cols=41  Identities=37%  Similarity=0.614  Sum_probs=21.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.38  E-value=1.9e-13  Score=61.10  Aligned_cols=39  Identities=46%  Similarity=0.874  Sum_probs=20.0

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ++|.++++|.|+.|++.|.+...|..|+++|+++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344445555555555555555555555555555555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=62.21  Aligned_cols=42  Identities=31%  Similarity=0.536  Sum_probs=28.7

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445666677777777777777777777777776777777665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.9e-13  Score=60.43  Aligned_cols=39  Identities=31%  Similarity=0.652  Sum_probs=21.6

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ++|.++++|.|+.|++.|.+...|..|+++|+++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-13  Score=60.72  Aligned_cols=41  Identities=39%  Similarity=0.702  Sum_probs=21.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.37  E-value=2e-13  Score=62.24  Aligned_cols=42  Identities=40%  Similarity=0.715  Sum_probs=23.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.6e-13  Score=60.98  Aligned_cols=41  Identities=41%  Similarity=0.702  Sum_probs=21.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=3.1e-13  Score=62.16  Aligned_cols=42  Identities=26%  Similarity=0.411  Sum_probs=31.4

Q ss_pred             hcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccc
Q psy10762         59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMK  100 (126)
Q Consensus        59 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  100 (126)
                      +.++++|.|+.|++.|.....|..|+++|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            455667777777777777777777777777777777777764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.37  E-value=2.9e-15  Score=72.81  Aligned_cols=50  Identities=24%  Similarity=0.495  Sum_probs=37.0

Q ss_pred             HHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHH
Q psy10762         54 YHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKE  106 (126)
Q Consensus        54 ~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~  106 (126)
                      .|+++|.+++||.|+.|++.|.....|.   ++|.++++|.|..|++.|...+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCc
Confidence            4566777778888888888887766664   6777788888888888876554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=6.4e-13  Score=60.49  Aligned_cols=42  Identities=40%  Similarity=0.719  Sum_probs=20.1

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.8e-13  Score=61.72  Aligned_cols=42  Identities=38%  Similarity=0.713  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            345556666666666666666666666666666666666664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2e-13  Score=62.27  Aligned_cols=42  Identities=40%  Similarity=0.718  Sum_probs=22.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.2e-13  Score=60.78  Aligned_cols=43  Identities=37%  Similarity=0.628  Sum_probs=22.1

Q ss_pred             HHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCC
Q psy10762         28 VRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC   70 (126)
Q Consensus        28 ~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   70 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344445555555555555555555555555555555555443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.5e-13  Score=61.87  Aligned_cols=42  Identities=43%  Similarity=0.756  Sum_probs=24.4

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            344555555666666666666666666666666555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.7e-13  Score=61.78  Aligned_cols=42  Identities=40%  Similarity=0.730  Sum_probs=25.9

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            344555666666666666666666666666666666666654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.3e-13  Score=61.46  Aligned_cols=42  Identities=40%  Similarity=0.719  Sum_probs=26.0

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555666666666666666666666666666666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.3e-13  Score=61.50  Aligned_cols=42  Identities=43%  Similarity=0.783  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            344555666666666666666666666666666666666654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3e-13  Score=61.64  Aligned_cols=42  Identities=43%  Similarity=0.729  Sum_probs=25.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555566666666666666666666666666666666554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.6e-13  Score=61.38  Aligned_cols=41  Identities=34%  Similarity=0.663  Sum_probs=23.4

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555555555555555555555555555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.6e-13  Score=60.99  Aligned_cols=41  Identities=39%  Similarity=0.723  Sum_probs=22.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555544

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.1e-13  Score=62.13  Aligned_cols=42  Identities=38%  Similarity=0.650  Sum_probs=29.7

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456666777777777777777777777777777777777665

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.7e-13  Score=61.81  Aligned_cols=42  Identities=45%  Similarity=0.850  Sum_probs=24.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555555566666666666666666666666555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=9.1e-13  Score=59.98  Aligned_cols=41  Identities=41%  Similarity=0.638  Sum_probs=28.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46667777777777777777777777777776667776654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.7e-13  Score=61.34  Aligned_cols=41  Identities=37%  Similarity=0.635  Sum_probs=24.2

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555666666666666666666666666666666554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.6e-13  Score=61.81  Aligned_cols=42  Identities=36%  Similarity=0.668  Sum_probs=23.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=61.91  Aligned_cols=41  Identities=44%  Similarity=0.725  Sum_probs=23.1

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455555555555555555555555555555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.4e-13  Score=61.44  Aligned_cols=42  Identities=36%  Similarity=0.662  Sum_probs=25.8

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344555666666666666666666666666666666666654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3e-13  Score=61.64  Aligned_cols=41  Identities=44%  Similarity=0.771  Sum_probs=25.4

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            44555666666666666666666666666666666666664

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.1e-12  Score=59.76  Aligned_cols=40  Identities=43%  Similarity=0.720  Sum_probs=23.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY   41 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   41 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4555555666666666655555555555555555555543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.9e-13  Score=61.67  Aligned_cols=41  Identities=41%  Similarity=0.742  Sum_probs=21.3

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            34444555555555555555555555555555555555553

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.1e-12  Score=60.00  Aligned_cols=41  Identities=37%  Similarity=0.596  Sum_probs=21.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHH-hhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVR-QHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|..|++.|.....|..|+. +|.++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3445555555555555555555555555 5555555555443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.4e-13  Score=61.46  Aligned_cols=41  Identities=39%  Similarity=0.634  Sum_probs=22.2

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            34455555555555555555555555555555555555553

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=61.55  Aligned_cols=42  Identities=43%  Similarity=0.744  Sum_probs=25.0

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            344555556666666666666666666666666666666554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.8e-13  Score=61.27  Aligned_cols=42  Identities=38%  Similarity=0.668  Sum_probs=24.9

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555556666666666666666666666666666666554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=61.57  Aligned_cols=41  Identities=46%  Similarity=0.814  Sum_probs=23.2

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.9e-12  Score=58.87  Aligned_cols=40  Identities=40%  Similarity=0.759  Sum_probs=24.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY   41 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   41 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556666666666666666666666666666666665553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=1e-12  Score=60.42  Aligned_cols=41  Identities=27%  Similarity=0.466  Sum_probs=26.7

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcc
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCA   43 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~   43 (126)
                      +.++++|.|.+|++.|.....|..|+.+|.++++|.|++|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            44556666666666666666666666666666666666665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.34  E-value=2.3e-13  Score=64.20  Aligned_cols=50  Identities=16%  Similarity=0.239  Sum_probs=35.4

Q ss_pred             cccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCc
Q psy10762         44 KSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH   93 (126)
Q Consensus        44 ~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~   93 (126)
                      +.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34555566666777777777777777777777777777777777777665

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.3e-13  Score=60.46  Aligned_cols=40  Identities=43%  Similarity=0.685  Sum_probs=21.5

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            3444555555555555555555555555555555555554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4.5e-13  Score=60.44  Aligned_cols=40  Identities=35%  Similarity=0.693  Sum_probs=21.3

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            3444555555555555555555555555555555555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.7e-13  Score=60.45  Aligned_cols=41  Identities=32%  Similarity=0.494  Sum_probs=23.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35555556666666666555556666555555555555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.3e-13  Score=61.48  Aligned_cols=41  Identities=39%  Similarity=0.661  Sum_probs=20.3

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444445555555555555555555555555555555443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.8e-13  Score=60.32  Aligned_cols=39  Identities=46%  Similarity=0.795  Sum_probs=17.9

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.1e-13  Score=61.16  Aligned_cols=42  Identities=43%  Similarity=0.744  Sum_probs=23.7

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.9e-13  Score=60.91  Aligned_cols=42  Identities=43%  Similarity=0.658  Sum_probs=23.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555553

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.6e-13  Score=60.12  Aligned_cols=40  Identities=40%  Similarity=0.811  Sum_probs=21.8

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3445555555555555555555555555555555555544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.7e-13  Score=60.72  Aligned_cols=39  Identities=44%  Similarity=0.826  Sum_probs=18.1

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.9e-13  Score=60.91  Aligned_cols=40  Identities=38%  Similarity=0.746  Sum_probs=19.8

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444555555555555555555555555544554443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7e-13  Score=60.38  Aligned_cols=41  Identities=39%  Similarity=0.763  Sum_probs=25.1

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34555666666666666666666666666666666666654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.1e-14  Score=71.70  Aligned_cols=68  Identities=18%  Similarity=0.186  Sum_probs=53.0

Q ss_pred             HHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcccc
Q psy10762         51 HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        51 ~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  121 (126)
                      .|..|+..+.+.+++.|+.|+..| ....|..|+ .+.+++++.|+.|++.|.. ..|..|+++|+++...
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~~~   71 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREGSG   71 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBSSS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCcCC
Confidence            345677777888888888888888 477888888 7888888888888888774 6888888888776543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=5.8e-13  Score=59.47  Aligned_cols=39  Identities=36%  Similarity=0.776  Sum_probs=19.5

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444555555555555555555555555555555443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7e-13  Score=60.39  Aligned_cols=42  Identities=31%  Similarity=0.523  Sum_probs=38.1

Q ss_pred             HHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccccCCC
Q psy10762         83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLP  124 (126)
Q Consensus        83 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  124 (126)
                      |+++|+++++|.|.+|++.|...+.|.+|+++|++++...++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567889999999999999999999999999999998877654

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.31  E-value=6.8e-13  Score=59.21  Aligned_cols=36  Identities=36%  Similarity=0.709  Sum_probs=15.7

Q ss_pred             hcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCcc
Q psy10762         59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHK   94 (126)
Q Consensus        59 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~   94 (126)
                      |.++++|.|+.|++.|.....|..|+++|+++++|.
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            334444444444444444444444444444444443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.2e-13  Score=59.76  Aligned_cols=40  Identities=20%  Similarity=0.492  Sum_probs=21.0

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3444555555555555555555555555555555555544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.1e-12  Score=59.09  Aligned_cols=39  Identities=31%  Similarity=0.482  Sum_probs=20.4

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            344455555555555555555555555555555555544

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.8e-13  Score=59.73  Aligned_cols=34  Identities=35%  Similarity=0.585  Sum_probs=16.1

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +|+++++|.|..|++.|.+.+.|..|+++|++++
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG   38 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCC
Confidence            3444444444444444444444444444444443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.4e-13  Score=60.52  Aligned_cols=42  Identities=26%  Similarity=0.397  Sum_probs=24.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcC-CCCccCc
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTG-ESPHKCT   96 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~-~~~~~C~   96 (126)
                      |+++|.++++|.|+.|++.|.....|..|+++|++ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34455555566666666666666666666666655 5555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.7e-12  Score=57.92  Aligned_cols=39  Identities=41%  Similarity=0.679  Sum_probs=23.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455566666666666666666666666666665565554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7e-13  Score=60.34  Aligned_cols=41  Identities=37%  Similarity=0.694  Sum_probs=21.5

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445555555555555555555555555555555555553

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.30  E-value=4.3e-12  Score=56.52  Aligned_cols=38  Identities=42%  Similarity=0.803  Sum_probs=26.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            56666777777777777777777777777766666665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=4e-12  Score=57.01  Aligned_cols=39  Identities=18%  Similarity=0.347  Sum_probs=28.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            566777777777777777777777777777777777765

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.29  E-value=4.5e-12  Score=57.62  Aligned_cols=39  Identities=41%  Similarity=0.712  Sum_probs=23.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666665554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.9e-12  Score=57.83  Aligned_cols=39  Identities=44%  Similarity=0.686  Sum_probs=23.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666665565554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.3e-12  Score=57.36  Aligned_cols=39  Identities=46%  Similarity=0.820  Sum_probs=24.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666666666666666666666666666666554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.3e-12  Score=57.35  Aligned_cols=39  Identities=36%  Similarity=0.673  Sum_probs=23.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            455666666666666666666666666666666666554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6e-13  Score=60.60  Aligned_cols=36  Identities=31%  Similarity=0.539  Sum_probs=15.6

Q ss_pred             HhhcCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        85 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      ++|+++++|.|.+|++.|.....|.+|+++|++++.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP   40 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC
Confidence            334444444444444444444444444444444433

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.9e-12  Score=56.32  Aligned_cols=38  Identities=34%  Similarity=0.586  Sum_probs=24.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45666666666666666666666666666666666655

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=59.52  Aligned_cols=43  Identities=33%  Similarity=0.634  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccccCCC
Q psy10762         82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRVNDLP  124 (126)
Q Consensus        82 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  124 (126)
                      .|+++|.++++|.|.+|++.|...+.|..|+++|++++...++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677889999999999999999999999999999998876653

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8e-13  Score=60.18  Aligned_cols=43  Identities=30%  Similarity=0.560  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         54 YHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        54 ~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      .|+++|.++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677899999999999999999999999999999999999986

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.28  E-value=4.1e-12  Score=56.95  Aligned_cols=39  Identities=18%  Similarity=0.405  Sum_probs=23.8

Q ss_pred             hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        58 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      .|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            345556666666666666666666666666666666654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.4e-12  Score=57.08  Aligned_cols=39  Identities=38%  Similarity=0.590  Sum_probs=23.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            455556666666666666666666666666555555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.2e-12  Score=57.41  Aligned_cols=39  Identities=38%  Similarity=0.639  Sum_probs=21.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            345555555555555555555555555555555555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.5e-12  Score=57.29  Aligned_cols=39  Identities=44%  Similarity=0.761  Sum_probs=23.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455556666666666666666666666666655555554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.6e-12  Score=57.97  Aligned_cols=40  Identities=33%  Similarity=0.580  Sum_probs=24.2

Q ss_pred             hhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        57 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3455556666666666666666666666666666666654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.9e-12  Score=57.48  Aligned_cols=39  Identities=46%  Similarity=0.784  Sum_probs=19.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            344455555555555555555555555555544444443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.1e-12  Score=57.43  Aligned_cols=39  Identities=44%  Similarity=0.721  Sum_probs=20.2

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.7e-12  Score=57.23  Aligned_cols=39  Identities=41%  Similarity=0.712  Sum_probs=21.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            345555555555555555555555555555555555554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=58.43  Aligned_cols=36  Identities=33%  Similarity=0.478  Sum_probs=17.5

Q ss_pred             HHhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         84 VRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        84 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS   39 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCS
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCC
Confidence            344444445555555555555555555555444443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=7.1e-12  Score=56.39  Aligned_cols=38  Identities=34%  Similarity=0.668  Sum_probs=22.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            45555666666666666666666666666655555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=6.8e-12  Score=57.49  Aligned_cols=41  Identities=34%  Similarity=0.583  Sum_probs=29.3

Q ss_pred             CCCCCcceecc--ccccccCChhHHHHHHHhhcCCCCcccCCc
Q psy10762          2 WHTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGESPHHCNYC   42 (126)
Q Consensus         2 ~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   42 (126)
                      +|+++++|.|.  .|++.|.....|..|+.+|.++++|.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777776  677777777777777777777777777655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5e-12  Score=57.47  Aligned_cols=41  Identities=37%  Similarity=0.663  Sum_probs=21.0

Q ss_pred             HHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccC
Q psy10762         28 VRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ   68 (126)
Q Consensus        28 ~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   68 (126)
                      +.+|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            33444455555555555555555555555555555555543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.3e-12  Score=57.11  Aligned_cols=39  Identities=41%  Similarity=0.708  Sum_probs=28.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            466777777777777777777777777777777777665

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8e-12  Score=56.77  Aligned_cols=39  Identities=44%  Similarity=0.653  Sum_probs=23.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            455556666666666666666666666666555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.8e-12  Score=57.25  Aligned_cols=39  Identities=41%  Similarity=0.703  Sum_probs=20.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344555555555555555555555555555555555443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.2e-12  Score=56.90  Aligned_cols=38  Identities=45%  Similarity=0.766  Sum_probs=19.0

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      |+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44445555555555555555555555555544444443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.6e-12  Score=56.85  Aligned_cols=39  Identities=38%  Similarity=0.621  Sum_probs=24.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            6 SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666666666666666666666666666666554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.4e-12  Score=57.35  Aligned_cols=40  Identities=43%  Similarity=0.718  Sum_probs=19.3

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ   68 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   68 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            3344444444555555554444455554444444444443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.7e-12  Score=57.59  Aligned_cols=39  Identities=41%  Similarity=0.736  Sum_probs=19.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344455555555555555555555555555544454443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6.7e-12  Score=57.01  Aligned_cols=39  Identities=46%  Similarity=0.749  Sum_probs=20.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            344555555555555555555555555555555555543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.3e-13  Score=59.55  Aligned_cols=40  Identities=35%  Similarity=0.512  Sum_probs=21.5

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      +++|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3445555555555555555555555555555555555544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.5e-12  Score=56.08  Aligned_cols=38  Identities=45%  Similarity=0.725  Sum_probs=21.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|..|++.|....+|..|+.+|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            35555556666666666555555566555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.9e-12  Score=56.76  Aligned_cols=39  Identities=46%  Similarity=0.778  Sum_probs=23.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455566666666666666666666666666655555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6.6e-12  Score=57.06  Aligned_cols=40  Identities=40%  Similarity=0.758  Sum_probs=19.7

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ   68 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   68 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3444444455555555555555555555555555555443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=8.5e-12  Score=56.70  Aligned_cols=39  Identities=38%  Similarity=0.681  Sum_probs=26.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            456666666766766666666666666666666666664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=6e-12  Score=55.78  Aligned_cols=38  Identities=34%  Similarity=0.593  Sum_probs=28.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|++|++.|.....|..|+.+|.++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            56777777777777777777777777777777777665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-12  Score=59.28  Aligned_cols=42  Identities=38%  Similarity=0.658  Sum_probs=29.5

Q ss_pred             hhhcCCCCcccC--CCCCcCCChhhHHHHHHhhcCCCCccCccc
Q psy10762         57 RQHTGETPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPHKCTYC   98 (126)
Q Consensus        57 ~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   98 (126)
                      ++|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456666777776  677777777777777777777777777665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.25  E-value=8.8e-12  Score=55.46  Aligned_cols=38  Identities=34%  Similarity=0.587  Sum_probs=25.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            46666777777777777777777777777766666654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6e-12  Score=56.62  Aligned_cols=38  Identities=42%  Similarity=0.755  Sum_probs=21.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            35555555555555555555555555555555555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=7.8e-12  Score=56.81  Aligned_cols=39  Identities=28%  Similarity=0.410  Sum_probs=23.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcC-CCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTG-ESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.+ +++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45556666666666666666666666666665 5565554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.6e-12  Score=56.83  Aligned_cols=39  Identities=38%  Similarity=0.675  Sum_probs=19.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555554454443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7e-12  Score=56.97  Aligned_cols=38  Identities=42%  Similarity=0.757  Sum_probs=19.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555555555444444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=9.2e-12  Score=56.01  Aligned_cols=38  Identities=24%  Similarity=0.465  Sum_probs=21.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            6 SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34555555555555555555555555555555555554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.8e-12  Score=58.70  Aligned_cols=39  Identities=44%  Similarity=0.782  Sum_probs=19.9

Q ss_pred             hhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        58 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      +|.++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            344445555555555555555555555555555555543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.5e-12  Score=55.93  Aligned_cols=38  Identities=37%  Similarity=0.686  Sum_probs=23.5

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45566666666666666666666666666666655554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=8e-12  Score=56.17  Aligned_cols=39  Identities=38%  Similarity=0.661  Sum_probs=18.7

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCccc
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC   67 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C   67 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            334444444444444444444444444444444444444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.23  E-value=3.4e-12  Score=55.29  Aligned_cols=36  Identities=36%  Similarity=0.719  Sum_probs=30.1

Q ss_pred             HHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        83 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      |+++|+++++|.|..|++.|...+.|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            566788888999999999999998999998888753

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.1e-11  Score=55.71  Aligned_cols=38  Identities=29%  Similarity=0.501  Sum_probs=21.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34555555555555555555555555555555555554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=6e-12  Score=55.78  Aligned_cols=37  Identities=38%  Similarity=0.702  Sum_probs=18.5

Q ss_pred             hcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccC
Q psy10762         59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC   95 (126)
Q Consensus        59 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   95 (126)
                      |.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3444455555555555555555555555555555443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=7.7e-12  Score=55.71  Aligned_cols=38  Identities=34%  Similarity=0.676  Sum_probs=21.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45555555555555555555555555555555555544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-11  Score=56.26  Aligned_cols=39  Identities=36%  Similarity=0.663  Sum_probs=21.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            345555555555555555555555555555555555543

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.3e-12  Score=55.74  Aligned_cols=38  Identities=45%  Similarity=0.845  Sum_probs=20.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|+.|++.|.....|..|+.+|.++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34555555555555555555555555555555555443

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=2.4e-12  Score=62.38  Aligned_cols=44  Identities=20%  Similarity=0.406  Sum_probs=21.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTR   48 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~   48 (126)
                      +|+++++|.|+.|++.|.....|.   .+|.++++|.|+.|+..|..
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~   51 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEE
T ss_pred             HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCcccc
Confidence            344555555555555554444433   34444445555555544443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=55.66  Aligned_cols=38  Identities=34%  Similarity=0.487  Sum_probs=25.6

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            46666667777777777776667777666666666655

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-11  Score=54.38  Aligned_cols=38  Identities=37%  Similarity=0.618  Sum_probs=24.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            45666666666666666666666666666666665544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.8e-12  Score=54.09  Aligned_cols=35  Identities=20%  Similarity=0.427  Sum_probs=29.4

Q ss_pred             HhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        85 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++|+++++|.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            35678888999999999999999999998888765

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.17  E-value=1.9e-11  Score=52.15  Aligned_cols=33  Identities=30%  Similarity=0.542  Sum_probs=28.1

Q ss_pred             hcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        87 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      |+++++|.|..|++.|.+.+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            567888999999999999999999998888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.4e-11  Score=52.91  Aligned_cols=32  Identities=28%  Similarity=0.355  Sum_probs=27.7

Q ss_pred             hcCCCCccCcc--cccccCCHHHHHHHHHHhhhc
Q psy10762         87 HTGESPHKCTY--CMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        87 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +++++||.|..  |++.|...+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            46789999986  999999999999999999865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.16  E-value=2.2e-11  Score=51.96  Aligned_cols=33  Identities=30%  Similarity=0.678  Sum_probs=28.2

Q ss_pred             hcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        87 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      |+++++|.|..|++.|...+.|.+|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            567888999999999999999999998888764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.2e-12  Score=65.77  Aligned_cols=65  Identities=17%  Similarity=0.202  Sum_probs=46.0

Q ss_pred             HHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCC
Q psy10762         23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        23 ~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      .|..|+..+.+.+++.|+.|+..|. ...|..|+ .+.+++++.|+.|++.|.. ..|..|++++.++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTB
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCC
Confidence            3455666667777777777777773 66777777 6777777777777777653 6777777777654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=5.2e-11  Score=51.05  Aligned_cols=34  Identities=29%  Similarity=0.516  Sum_probs=28.8

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4677889999999999999999999999888653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.4e-11  Score=51.35  Aligned_cols=34  Identities=24%  Similarity=0.574  Sum_probs=28.6

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      .|.++++|.|.+|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4677889999999999999999999998887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.5e-11  Score=51.96  Aligned_cols=34  Identities=26%  Similarity=0.496  Sum_probs=28.9

Q ss_pred             hhcCCCCccCcccccccCCH-HHHHHHHHHhhhcc
Q psy10762         86 RHTGESPHKCTYCMKSFTRK-EHLTNHIRQHTVRR  119 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  119 (126)
                      +|+++++|.|..|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46778899999999999998 89999999888753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.4e-11  Score=51.68  Aligned_cols=34  Identities=15%  Similarity=0.280  Sum_probs=28.7

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      .|.++++|.|.+|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4567889999999999999999999999887653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.10  E-value=1.1e-10  Score=50.99  Aligned_cols=37  Identities=16%  Similarity=0.370  Sum_probs=27.2

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCccc
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC   39 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   39 (126)
                      |+++++|.|..|++.|.....|..|+.+|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4667778888888888777777888777777776654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=9.4e-11  Score=50.22  Aligned_cols=34  Identities=29%  Similarity=0.468  Sum_probs=28.3

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      .|.++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3567888999999999999999999998888753

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.07  E-value=1.2e-10  Score=50.82  Aligned_cols=31  Identities=23%  Similarity=0.570  Sum_probs=14.9

Q ss_pred             CCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         89 GESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++++|.|.+|++.|...+.|..|+++|++++
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   33 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDR   33 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCc
Confidence            3444445455555555444555544444443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.06  E-value=2.3e-10  Score=48.60  Aligned_cols=34  Identities=26%  Similarity=0.522  Sum_probs=28.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES   35 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   35 (126)
                      +|+++++|.|..|++.|.....|..|+..|.+++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            4778888888888888888888888888887654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.06  E-value=2.4e-10  Score=48.57  Aligned_cols=34  Identities=29%  Similarity=0.588  Sum_probs=28.8

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES   35 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   35 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.+++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4788888999999999998888999988887764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.3e-10  Score=49.77  Aligned_cols=33  Identities=33%  Similarity=0.605  Sum_probs=28.0

Q ss_pred             hcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        87 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            567788999999999999999999999888653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=2e-10  Score=49.49  Aligned_cols=34  Identities=18%  Similarity=0.429  Sum_probs=28.0

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES   35 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   35 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            6778888888888888888888888888887654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=4.3e-11  Score=51.75  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=28.2

Q ss_pred             HhhcCCCCccCcccccccCCHHHHHHH-HHHhhhc
Q psy10762         85 RRHTGESPHKCTYCMKSFTRKEHLTNH-IRQHTVR  118 (126)
Q Consensus        85 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  118 (126)
                      ++|+++++|.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            357788899999999999999999999 8888753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=2.9e-10  Score=55.36  Aligned_cols=37  Identities=27%  Similarity=0.494  Sum_probs=22.7

Q ss_pred             cCCCCcccCC--CCCcCCChhhHHHHH-HhhcCCCCccCc
Q psy10762         60 TGETPFPCQY--CPKAFTRKDHLVNHV-RRHTGESPHKCT   96 (126)
Q Consensus        60 ~~~~~~~C~~--C~~~~~~~~~l~~h~-~~~~~~~~~~C~   96 (126)
                      .|++||.|+.  |+++|.+...|..|+ ++|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            4566666643  666666666666665 456666666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=8.7e-12  Score=64.49  Aligned_cols=57  Identities=16%  Similarity=0.276  Sum_probs=36.5

Q ss_pred             HhhcCCCCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcC
Q psy10762         29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTG   89 (126)
Q Consensus        29 ~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   89 (126)
                      .+|.++++|.|+.|++.|.....|..|+++|.+++||.|..|.    ....+..|.+++.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3466666777777777777777777777777777777776553    23344455555554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=53.47  Aligned_cols=35  Identities=20%  Similarity=0.449  Sum_probs=26.7

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHH-Hhhhccc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIR-QHTVRRV  120 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  120 (126)
                      +|+++++|.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3677888999889999998888999988 7876544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=4e-10  Score=54.87  Aligned_cols=38  Identities=26%  Similarity=0.463  Sum_probs=21.4

Q ss_pred             CCCCcceeccc--cccccCChhHHHHHH-HhhcCCCCcccC
Q psy10762          3 HTGETPHRCDY--CAKTFTRKEHLVNHV-RQHTGESPHHCN   40 (126)
Q Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~~~~c~   40 (126)
                      +++++||.|..  |++.|....+|..|+ ++|++++|+.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            34556666643  666666666666664 456555555554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.02  E-value=2.7e-10  Score=47.88  Aligned_cols=29  Identities=34%  Similarity=0.654  Sum_probs=17.3

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      +|.|.+|++.|...+.|..|+++|++++.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            45666666666666666666666655543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=99.00  E-value=3e-10  Score=48.99  Aligned_cols=33  Identities=33%  Similarity=0.573  Sum_probs=28.2

Q ss_pred             hcCCCCccCc--ccccccCCHHHHHHHHHHhhhcc
Q psy10762         87 HTGESPHKCT--YCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        87 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++++++|.|.  .|++.|...+.|.+|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            5678899998  49999999999999999998764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.99  E-value=2.6e-10  Score=49.08  Aligned_cols=35  Identities=43%  Similarity=0.806  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcC
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTG   89 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   89 (126)
                      |+++|.+++||.|+.|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45567777778888888888887788777777765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=4.6e-10  Score=48.60  Aligned_cols=34  Identities=29%  Similarity=0.582  Sum_probs=26.3

Q ss_pred             hcCCCCccCc--ccccccCCHHHHHHHHHHhhhccc
Q psy10762         87 HTGESPHKCT--YCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        87 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      |+++++|.|.  .|++.|...+.|.+|+++|++++.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            4567788888  488888888888888888877654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.98  E-value=7.1e-10  Score=46.56  Aligned_cols=32  Identities=38%  Similarity=0.721  Sum_probs=23.4

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCCCcc
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHK   94 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~   94 (126)
                      +||.|+.|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36777777777777777777777777777664

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.94  E-value=5.3e-10  Score=45.59  Aligned_cols=29  Identities=28%  Similarity=0.655  Sum_probs=24.0

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +++|.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46788888888888888888888888765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.3e-09  Score=46.49  Aligned_cols=33  Identities=24%  Similarity=0.527  Sum_probs=27.7

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      .|+++++|.|.+|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            578888888888888888888888888888754

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.93  E-value=7.1e-10  Score=44.26  Aligned_cols=27  Identities=30%  Similarity=0.642  Sum_probs=23.3

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +++|.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468899999999999999999988874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.93  E-value=9e-10  Score=44.57  Aligned_cols=28  Identities=39%  Similarity=0.810  Sum_probs=23.2

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ++|.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888888765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.2e-09  Score=46.90  Aligned_cols=33  Identities=24%  Similarity=0.543  Sum_probs=27.0

Q ss_pred             CCCCCcceeccccccccCCh-hHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRK-EHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~-~~l~~h~~~h~~~   34 (126)
                      +|+++++|.|..|++.|... ..|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            67888888888888888888 8888888887654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=1e-09  Score=53.44  Aligned_cols=33  Identities=30%  Similarity=0.416  Sum_probs=21.5

Q ss_pred             hcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        87 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +..+++|.|..|++.|.+.+.|.+|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            344566777777777777667777777666544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-09  Score=46.19  Aligned_cols=33  Identities=33%  Similarity=0.575  Sum_probs=27.1

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      +|+++++|.|..|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            577888888888888888888888888888754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.5e-09  Score=46.37  Aligned_cols=33  Identities=15%  Similarity=0.277  Sum_probs=27.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      .|+++++|.|..|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            577888888888888888888888888887654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.91  E-value=9e-10  Score=44.53  Aligned_cols=29  Identities=38%  Similarity=0.717  Sum_probs=24.2

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47888899999999889999988887753

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2e-09  Score=46.66  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=26.8

Q ss_pred             CCCCCcceeccc--cccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      .+++++||.|..  |++.|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467888888875  888888888888888888764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.5e-09  Score=46.69  Aligned_cols=34  Identities=18%  Similarity=0.275  Sum_probs=28.6

Q ss_pred             CCCCCCcceeccccccccCChhHHHHH-HHhhcCC
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNH-VRQHTGE   34 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~~   34 (126)
                      .+|+++++|.|..|++.|.....|..| +..|.+.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            368889999999999999999999999 7787653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=7.3e-11  Score=61.00  Aligned_cols=58  Identities=12%  Similarity=0.274  Sum_probs=47.3

Q ss_pred             HhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        56 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ..+|.++++|.|+.|++.|.....|..|+++|+++++|.|..|.+.    ..|..|.++|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~----~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR----KQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC----CCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH----HHHHhhhccccc
Confidence            3568899999999999999999999999999999999999876543    345566666654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.91  E-value=5.9e-10  Score=45.17  Aligned_cols=28  Identities=39%  Similarity=0.643  Sum_probs=22.8

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ++|.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4678888888888888888888888765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.90  E-value=1.8e-09  Score=46.46  Aligned_cols=34  Identities=38%  Similarity=0.655  Sum_probs=29.7

Q ss_pred             CCCCCCcceecc--ccccccCChhHHHHHHHhhcCC
Q psy10762          1 MWHTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         1 ~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      |.|+++++|.|.  .|++.|.....|..|+.+|.++
T Consensus         1 ~~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            1 MDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            678899999998  4999999999999999888765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.90  E-value=5.4e-10  Score=44.68  Aligned_cols=27  Identities=22%  Similarity=0.613  Sum_probs=23.2

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +++|.|..|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468899999999999999999988874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.90  E-value=6.8e-11  Score=53.93  Aligned_cols=38  Identities=24%  Similarity=0.541  Sum_probs=29.5

Q ss_pred             HHHHhhcCCCCccCc--ccccccCCHHHHHHHHHHhhhcc
Q psy10762         82 NHVRRHTGESPHKCT--YCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        82 ~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      .|...|+++++|.|.  .|++.|...+.|.+|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344567888888885  68888888888888888887653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.8e-09  Score=46.67  Aligned_cols=35  Identities=26%  Similarity=0.541  Sum_probs=27.1

Q ss_pred             CCCCcceecc--ccccccCChhHHHHHHHhhcCCCCc
Q psy10762          3 HTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGESPH   37 (126)
Q Consensus         3 ~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~   37 (126)
                      |+++++|.|.  .|++.|.....|..|+.+|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5677888888  5888888888888888888776654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.3e-09  Score=45.69  Aligned_cols=33  Identities=33%  Similarity=0.567  Sum_probs=26.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      +|+++++|.|.+|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            567788888888888888888888888887654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.89  E-value=1.2e-09  Score=45.32  Aligned_cols=30  Identities=30%  Similarity=0.648  Sum_probs=23.8

Q ss_pred             CCCccCc--ccccccCCHHHHHHHHHHhhhcc
Q psy10762         90 ESPHKCT--YCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        90 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +++|.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678887  78888888888888888887653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.88  E-value=8.5e-10  Score=44.35  Aligned_cols=28  Identities=36%  Similarity=0.645  Sum_probs=23.3

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      +++|.|..|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678899999999998899999888763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.87  E-value=1e-09  Score=44.36  Aligned_cols=28  Identities=32%  Similarity=0.670  Sum_probs=21.8

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ++|.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677888888888888888888887765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.87  E-value=1.4e-09  Score=44.81  Aligned_cols=29  Identities=48%  Similarity=0.888  Sum_probs=23.1

Q ss_pred             CCccCc--ccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCT--YCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++|.|.  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            467887  78888888888888888887653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=49.45  Aligned_cols=34  Identities=26%  Similarity=0.539  Sum_probs=27.2

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHH-hhcCCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVR-QHTGES   35 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~   35 (126)
                      +|+++++|.|.+|++.|....+|..|+. +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            5788889999999999999888999988 787653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4e-09  Score=44.97  Aligned_cols=33  Identities=36%  Similarity=0.633  Sum_probs=26.3

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      .|+++++|.|..|++.|.....|..|+.+|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            466778888888888888888888888887654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.83  E-value=2e-09  Score=46.09  Aligned_cols=26  Identities=19%  Similarity=0.282  Sum_probs=21.8

Q ss_pred             CCCCcceeccccccccCChhHHHHHH
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHV   28 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~   28 (126)
                      +.+++||.|.+|++.|...++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46788888888888888888888887

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=3.7e-10  Score=45.87  Aligned_cols=29  Identities=41%  Similarity=0.804  Sum_probs=23.9

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++|.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46888889999988888899988887653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.83  E-value=3.1e-09  Score=45.46  Aligned_cols=25  Identities=20%  Similarity=0.337  Sum_probs=16.2

Q ss_pred             cCCCCccCcccccccCCHHHHHHHH
Q psy10762         88 TGESPHKCTYCMKSFTRKEHLTNHI  112 (126)
Q Consensus        88 ~~~~~~~C~~C~~~f~~~~~l~~H~  112 (126)
                      .+++||.|.+|+++|.+.+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666665

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=3.9e-10  Score=46.08  Aligned_cols=29  Identities=31%  Similarity=0.584  Sum_probs=24.3

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +++|.|..|++.|...+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36788989999999888899998888765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.81  E-value=2.1e-09  Score=42.75  Aligned_cols=26  Identities=38%  Similarity=0.691  Sum_probs=20.9

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      +|.|..|++.|.+.+.|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            47788888888888888888888765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.79  E-value=4e-09  Score=42.84  Aligned_cols=29  Identities=21%  Similarity=0.501  Sum_probs=22.0

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++|.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36778888888888888888888777653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=9.7e-10  Score=43.43  Aligned_cols=26  Identities=42%  Similarity=0.829  Sum_probs=21.8

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      ++|.|..|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47888899999998888999888774

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.72  E-value=3.7e-09  Score=43.02  Aligned_cols=28  Identities=29%  Similarity=0.621  Sum_probs=20.8

Q ss_pred             CCccCcccccccCCHHHHHHH-HHHhhhc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNH-IRQHTVR  118 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  118 (126)
                      ++|.|..|++.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            367788888888888888888 5777654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.72  E-value=2e-10  Score=47.99  Aligned_cols=28  Identities=29%  Similarity=0.590  Sum_probs=17.6

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +|.|..|++.|...+.|.+|+++|++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.67  E-value=8.7e-09  Score=46.73  Aligned_cols=31  Identities=26%  Similarity=0.559  Sum_probs=14.9

Q ss_pred             CCCCcceecc--ccccccCChhHHHHHHHhhcC
Q psy10762          3 HTGETPHRCD--YCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         3 ~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      |+++++|.|.  .|++.|....+|..|+.+|.+
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            4444455553  355555555555555544443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.64  E-value=3.1e-08  Score=40.01  Aligned_cols=29  Identities=28%  Similarity=0.783  Sum_probs=21.2

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      +++|.|..|++.|.....|..|+.+|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35777777777777777777777777654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.62  E-value=1.2e-09  Score=45.54  Aligned_cols=31  Identities=32%  Similarity=0.592  Sum_probs=22.4

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCCCc
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPH   93 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~   93 (126)
                      +||.|+.|++.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3677777777777777777777777777665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.61  E-value=2.1e-08  Score=40.27  Aligned_cols=27  Identities=30%  Similarity=0.509  Sum_probs=22.7

Q ss_pred             CCccCc--ccccccCCHHHHHHHHHHhhh
Q psy10762         91 SPHKCT--YCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        91 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468888  899999999999999888863

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.61  E-value=3.8e-08  Score=39.52  Aligned_cols=28  Identities=32%  Similarity=0.636  Sum_probs=19.4

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      ++|.|..|++.|.....|..|+.+|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3577777777777777777777766543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.60  E-value=6.5e-08  Score=38.76  Aligned_cols=27  Identities=48%  Similarity=1.004  Sum_probs=18.1

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      +|.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566667777777766777776666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.59  E-value=4.2e-08  Score=38.79  Aligned_cols=26  Identities=27%  Similarity=0.654  Sum_probs=19.9

Q ss_pred             CcceeccccccccCChhHHHHHHHhh
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      +++|.|..|++.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            36778888888888888888887765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.58  E-value=5.5e-08  Score=38.91  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=17.3

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=5.5e-08  Score=47.29  Aligned_cols=32  Identities=28%  Similarity=0.398  Sum_probs=24.1

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      +..+++|.|.+|++.|.....|..|+++|++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            45667788888888887777788887777764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.55  E-value=6e-08  Score=38.83  Aligned_cols=28  Identities=43%  Similarity=0.853  Sum_probs=19.4

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      ++|.|..|++.|.....|..|+.+|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3577777777777777777777776553

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.55  E-value=9.9e-08  Score=38.43  Aligned_cols=28  Identities=21%  Similarity=0.595  Sum_probs=17.7

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCCC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGES   91 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~   91 (126)
                      +|.|+.|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666665543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.55  E-value=3.9e-08  Score=38.96  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=20.1

Q ss_pred             CcceeccccccccCChhHHHHHHHhh
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      +++|.|..|++.|.....|..|+.+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            36788888888888888888887665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.55  E-value=1e-07  Score=39.18  Aligned_cols=28  Identities=36%  Similarity=0.852  Sum_probs=18.7

Q ss_pred             CCcccC--CCCCcCCChhhHHHHHHhhcCC
Q psy10762         63 TPFPCQ--YCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        63 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            466666  6777777777777777666654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.55  E-value=5.8e-08  Score=38.66  Aligned_cols=27  Identities=37%  Similarity=0.716  Sum_probs=19.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      +++|.|..|++.|.....|..|+.+|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            356777777777777777777776664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.54  E-value=8.8e-08  Score=39.13  Aligned_cols=28  Identities=61%  Similarity=1.112  Sum_probs=19.0

Q ss_pred             CCcccC--CCCCcCCChhhHHHHHHhhcCC
Q psy10762         63 TPFPCQ--YCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        63 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356676  6777777777777777776654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1.6e-07  Score=37.86  Aligned_cols=27  Identities=41%  Similarity=0.972  Sum_probs=16.8

Q ss_pred             CcccCCCCCcCCChhhHHHH-HHhhcCC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNH-VRRHTGE   90 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h-~~~~~~~   90 (126)
                      ||.|+.|++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.4e-08  Score=40.21  Aligned_cols=27  Identities=52%  Similarity=1.004  Sum_probs=18.4

Q ss_pred             cceeccccccccCChhHHHHHHHhhcC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      ++|.|..|++.|.....|..|+.+|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            356777777777777777777766654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.43  E-value=2e-07  Score=36.60  Aligned_cols=26  Identities=31%  Similarity=0.746  Sum_probs=15.6

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTG   89 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~   89 (126)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=3e-08  Score=40.16  Aligned_cols=27  Identities=41%  Similarity=0.719  Sum_probs=18.7

Q ss_pred             cceeccccccccCChhHHHHHHHhhcC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      ++|.|..|++.|.....|..|+.+|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            567777777777777777777766654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.7e-08  Score=38.02  Aligned_cols=25  Identities=40%  Similarity=0.930  Sum_probs=17.8

Q ss_pred             cceeccccccccCChhHHHHHHHhh
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      ++|.|..|++.|.....|..|+.+|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777777777777777776655

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.29  E-value=3e-06  Score=40.86  Aligned_cols=48  Identities=23%  Similarity=0.402  Sum_probs=36.3

Q ss_pred             CCCCcCCChhhHHHHHH-hhcCCC------CccCc--ccccccCCHHHHHHHHHHhh
Q psy10762         69 YCPKAFTRKDHLVNHVR-RHTGES------PHKCT--YCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        69 ~C~~~~~~~~~l~~h~~-~~~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h~  116 (126)
                      .|++.|.+...|..|+. .|.+.+      .|.|.  .|++.+.....|.+|+++.+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            37777777777777773 565544      68896  69998888889999988753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.24  E-value=8.5e-07  Score=35.25  Aligned_cols=26  Identities=27%  Similarity=0.599  Sum_probs=19.7

Q ss_pred             cceecc--ccccccCChhHHHHHHHhhc
Q psy10762          7 TPHRCD--YCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         7 ~~~~C~--~C~~~f~~~~~l~~h~~~h~   32 (126)
                      ++|.|.  .|++.|.....|..|+.+|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            367777  88888888888888877764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.83  E-value=6.1e-05  Score=36.20  Aligned_cols=23  Identities=26%  Similarity=0.559  Sum_probs=11.5

Q ss_pred             CcccC--CCCCcCCChhhHHHHHHh
Q psy10762         64 PFPCQ--YCPKAFTRKDHLVNHVRR   86 (126)
Q Consensus        64 ~~~C~--~C~~~~~~~~~l~~h~~~   86 (126)
                      +|.|.  .|++.+.....|..|++.
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccc
Confidence            45554  355555555555555543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.75  E-value=5.2e-06  Score=45.04  Aligned_cols=31  Identities=26%  Similarity=0.539  Sum_probs=26.2

Q ss_pred             HHhhcCCCCccCcccccccCCHHHHHHHHHH
Q psy10762         84 VRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        84 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      ...++|+++|.|..|++.|.+.+.|..|+++
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            3457788899999999999999999999766

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.58  E-value=5.8e-05  Score=33.40  Aligned_cols=25  Identities=24%  Similarity=0.429  Sum_probs=19.6

Q ss_pred             CCccCcccccccCCHHHHHHHHHHh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h  115 (126)
                      .+|.|+.|+..|.....|++|++--
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5678888888888888888887753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.51  E-value=2.3e-05  Score=42.55  Aligned_cols=28  Identities=36%  Similarity=0.560  Sum_probs=17.4

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHH
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVR   29 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~   29 (126)
                      +|+|+++|.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            3556666666666666666666666654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.39  E-value=0.0003  Score=38.57  Aligned_cols=76  Identities=14%  Similarity=0.297  Sum_probs=47.4

Q ss_pred             CCcccCCcccccCCchHHHHHHh--hhcCC-CCccc------CCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCH
Q psy10762         35 SPHHCNYCAKSFTRKDHMVYHER--QHTGE-TPFPC------QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRK  105 (126)
Q Consensus        35 ~~~~c~~C~~~~~~~~~l~~h~~--~~~~~-~~~~C------~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~  105 (126)
                      .++.|..|+..|.+...+..|..  .|... +.+.+      +.-++.+....    +.....+...|.|.+|+..|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            46789999999999999988873  22111 11111      00111221111    11223456678999999999999


Q ss_pred             HHHHHHHHH
Q psy10762        106 EHLTNHIRQ  114 (126)
Q Consensus       106 ~~l~~H~~~  114 (126)
                      ..|..|...
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999999743

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.93  E-value=0.0018  Score=37.18  Aligned_cols=104  Identities=16%  Similarity=0.314  Sum_probs=68.6

Q ss_pred             eeccccccccCChh-----HHHHHHHhhcCCCCcccC--CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHH
Q psy10762          9 HRCDYCAKTFTRKE-----HLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLV   81 (126)
Q Consensus         9 ~~C~~C~~~f~~~~-----~l~~h~~~h~~~~~~~c~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~   81 (126)
                      ..|+.|...+....     .+...+    ......|+  -|+..+. ...+..|. ....-.+..|+.|+..+ ....+.
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~  126 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKME-LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHIN  126 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEEE-GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHH
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCceec-HhHHHHHH-hcCCceeeECCCCChHH-HHHHHH
Confidence            37899887765431     111111    12335564  4665443 45677886 34555677899999877 556788


Q ss_pred             HHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        82 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      .|....-..+...|+.|+..+... .|..|..++.++..
T Consensus       127 ~H~~~~C~~r~~~C~~C~~~~~~~-~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          127 IHILKDCPRRQVSCDNCAASMAFE-DKEIHDQNCPLALE  164 (170)
T ss_dssp             HHHHHTCTTCEEECTTTCCEEEGG-GHHHHHTTCCC---
T ss_pred             HHhhhhCCCCCeECCCCCCccCHH-HHHhHHHhCcChhh
Confidence            999877777888899999988765 78999988776543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.68  E-value=0.0029  Score=27.99  Aligned_cols=24  Identities=21%  Similarity=0.337  Sum_probs=15.5

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhh
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRH   87 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~   87 (126)
                      +|.||.|+..|.....|..|++..
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhhc
Confidence            466666666666666666666643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=96.65  E-value=0.0019  Score=26.72  Aligned_cols=25  Identities=28%  Similarity=0.487  Sum_probs=19.2

Q ss_pred             CccCcccccccCCHHHHHHHHHHhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      .|.|+.|.+.|.+...|..|....+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            3788888888888888888866544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.65  E-value=0.0019  Score=37.03  Aligned_cols=78  Identities=18%  Similarity=0.304  Sum_probs=41.0

Q ss_pred             ccCCcccccCCchHH-HHHHhhhcCCCCcccC--CCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHH
Q psy10762         38 HCNYCAKSFTRKDHM-VYHERQHTGETPFPCQ--YCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        38 ~c~~C~~~~~~~~~l-~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      .|+.|...+.....+ ...+......-...|+  .|...+. ...+..|.... .-.+..|+.|+..+. +..|..|...
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~~-r~~l~~H~~~  131 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPFQ-KFHINIHILK  131 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEEE-GGGHHHHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHHH-HHHHHHHhhh
Confidence            688887665542110 0001111122334563  4665543 44666776432 235567888888774 4477888754


Q ss_pred             hhhc
Q psy10762        115 HTVR  118 (126)
Q Consensus       115 h~~~  118 (126)
                      .-..
T Consensus       132 ~C~~  135 (170)
T 3hcs_A          132 DCPR  135 (170)
T ss_dssp             TCTT
T ss_pred             hCCC
Confidence            4333

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.38  E-value=0.0062  Score=33.30  Aligned_cols=76  Identities=17%  Similarity=0.288  Sum_probs=49.0

Q ss_pred             cceeccccccccCChhHHHHHH--HhhcCC-CCcccC------CcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCCh
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHV--RQHTGE-SPHHCN------YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRK   77 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~--~~h~~~-~~~~c~------~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   77 (126)
                      +++.|..|...|.+...+..|.  ..|... +.+.+.      .-+..+....    +.....+...|-|..|...|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            5688999999999999999998  344321 111110      0011121111    11234566778999999999999


Q ss_pred             hhHHHHHHh
Q psy10762         78 DHLVNHVRR   86 (126)
Q Consensus        78 ~~l~~h~~~   86 (126)
                      ..+..|...
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999998853

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=95.18  E-value=0.04  Score=22.86  Aligned_cols=27  Identities=15%  Similarity=0.289  Sum_probs=19.6

Q ss_pred             CcceeccccccccCChhHHHHHHHhhc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      ...+.|..|...|....++..|.+..-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~YC   32 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHTS
T ss_pred             cCcCeeccccceehhhHHHhhhheecC
Confidence            355778888888888888888876543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.17  E-value=0.039  Score=22.73  Aligned_cols=24  Identities=21%  Similarity=0.444  Sum_probs=16.6

Q ss_pred             ceeccccccccCChhHHHHHHHhh
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      .|.|+.|-+.+.....|..|....
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            477777777777777777776543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=94.28  E-value=0.024  Score=28.09  Aligned_cols=41  Identities=24%  Similarity=0.355  Sum_probs=22.1

Q ss_pred             CCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCC
Q psy10762         35 SPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTR   76 (126)
Q Consensus        35 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~   76 (126)
                      ..|.|..||..+. ...+..|...-.+-..|.|..|+..|..
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            4466666665443 3345666443333334666666666653

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=92.91  E-value=0.049  Score=27.56  Aligned_cols=23  Identities=30%  Similarity=0.547  Sum_probs=14.1

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      ....|.+||+.|..   |.+|+..++
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~h   42 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHH   42 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTT
T ss_pred             CceEecccchhhHH---HHHHHHHcc
Confidence            33467777777764   457776654

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=92.52  E-value=0.11  Score=26.98  Aligned_cols=42  Identities=24%  Similarity=0.528  Sum_probs=27.1

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCCCccCc---ccccccCCHHHHHHHHHH
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCT---YCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~---~C~~~f~~~~~l~~H~~~  114 (126)
                      .|+.|...+..-..       +..+..|.|.   .|.++|.+..+|+.|+..
T Consensus        39 ~Cp~C~~~V~rVe~-------~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~   83 (101)
T 3vk6_A           39 MCPGCSDPVQRIEQ-------CTRGSLFMCSIVQGCKRTYLSQRDLQAHINH   83 (101)
T ss_dssp             BCTTTCCBCSEEEE-------EEGGGCCCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred             CCcCcCCeeeeeEE-------eccCCEEECCCCCCHHHHhcCHHHHHHHHHH
Confidence            67777665544322       2234567776   388888888888888665

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=92.35  E-value=0.15  Score=20.00  Aligned_cols=22  Identities=23%  Similarity=0.317  Sum_probs=17.1

Q ss_pred             ceeccccccccCChhHHHHHHH
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVR   29 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~   29 (126)
                      .|.|++|.........++.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4778888888888888877764

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=92.34  E-value=0.078  Score=27.82  Aligned_cols=29  Identities=24%  Similarity=0.635  Sum_probs=19.5

Q ss_pred             CCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcC
Q psy10762         35 SPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAF   74 (126)
Q Consensus        35 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~   74 (126)
                      .++.|..||+.|.           ....+|-.||.|....
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            4678888998882           1233567888887543

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=92.20  E-value=0.013  Score=29.02  Aligned_cols=54  Identities=15%  Similarity=0.375  Sum_probs=28.7

Q ss_pred             cccCCcccccCCchHHHHHHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccC
Q psy10762         37 HHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFT  103 (126)
Q Consensus        37 ~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~  103 (126)
                      .+|++||....+. .|...|..--.        -...|.....+..-..    +-.|+|+.||..|-
T Consensus         9 ~~~PlCG~~L~W~-eLIeQML~~en--------~~ei~kDr~~Fl~~~e----~F~FkCP~CgEEFy   62 (95)
T 2k5c_A            9 AKCPICGSPLKWE-ELIEEMLIIEN--------FEEIVKDRERFLAQVE----EFVFKCPVCGEEFY   62 (95)
T ss_dssp             EECSSSCCEECHH-HHHHHSTTCST--------HHHHTTCHHHHHHHHH----HSEEECTTTCCEEE
T ss_pred             ccCCcCCCccCHH-HHHHHHHhhcc--------HHHHHhhHHHHHHHHH----HHhhcCCCccHHHh
Confidence            4788888765443 34444332111        0124445555544333    34688999988774

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.05  E-value=0.11  Score=25.71  Aligned_cols=47  Identities=21%  Similarity=0.401  Sum_probs=34.7

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHH
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYH   55 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h   55 (126)
                      ..|.|+.||.++.- ..+..|...-.+-..+.|-.|+..|.. ..+..|
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            45899999998866 468889766554446899999999975 334444

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=91.90  E-value=0.14  Score=21.77  Aligned_cols=25  Identities=20%  Similarity=0.417  Sum_probs=15.0

Q ss_pred             CcceeccccccccCChhHHHHHHHhh
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      ...+.|+.|+..+.. ..+..|.-.|
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhhHH
Confidence            345667777776665 3456665554

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.40  E-value=0.23  Score=19.92  Aligned_cols=23  Identities=30%  Similarity=0.813  Sum_probs=17.5

Q ss_pred             cCcccccccCCHHHHHHHHHHhh
Q psy10762         94 KCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        94 ~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      -|..|.+.++.-.+|..|++..+
T Consensus        11 hcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            47778888888888888877644

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=90.43  E-value=0.081  Score=23.40  Aligned_cols=10  Identities=20%  Similarity=0.909  Sum_probs=5.2

Q ss_pred             cccCCCCCcC
Q psy10762         65 FPCQYCPKAF   74 (126)
Q Consensus        65 ~~C~~C~~~~   74 (126)
                      |.|..||.++
T Consensus         5 y~C~vCGyvy   14 (46)
T 6rxn_A            5 YVCNVCGYEY   14 (46)
T ss_dssp             EEETTTCCEE
T ss_pred             EECCCCCeEE
Confidence            4555555444

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=89.94  E-value=0.24  Score=21.81  Aligned_cols=14  Identities=36%  Similarity=0.750  Sum_probs=8.3

Q ss_pred             CcccCCCCCcCCCh
Q psy10762         64 PFPCQYCPKAFTRK   77 (126)
Q Consensus        64 ~~~C~~C~~~~~~~   77 (126)
                      .|.|-.||+.|+..
T Consensus         3 iY~C~rCg~~fs~~   16 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE   16 (48)
T ss_dssp             --CCCCTTTTCCCC
T ss_pred             EEEeeccCCCccHH
Confidence            46677777777654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=89.77  E-value=0.12  Score=30.64  Aligned_cols=25  Identities=24%  Similarity=0.548  Sum_probs=17.8

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccc
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMK  100 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  100 (126)
                      ..|.|+.||..+..             ..|+.|++|+-
T Consensus       170 ~~~~C~~CG~i~~g-------------~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHKG-------------EDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEES-------------SCCSBCTTTCC
T ss_pred             cEEEECCCCCEEcC-------------cCCCCCCCCCC
Confidence            35888888876541             35688888874

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.44  E-value=0.1  Score=25.80  Aligned_cols=29  Identities=14%  Similarity=0.394  Sum_probs=18.8

Q ss_pred             ccCcccccccC-------CHHHHHHHHHHhhhcccc
Q psy10762         93 HKCTYCMKSFT-------RKEHLTNHIRQHTVRRVN  121 (126)
Q Consensus        93 ~~C~~C~~~f~-------~~~~l~~H~~~h~~~~~~  121 (126)
                      -.|..|++.++       .=+.|.+|++..+.+...
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~   64 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELE   64 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHH
Confidence            45777777665       125788888776655444

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=89.22  E-value=0.33  Score=23.52  Aligned_cols=27  Identities=15%  Similarity=0.429  Sum_probs=15.4

Q ss_pred             CCcccCCcccccCCchHHHHHHhhhcCCCCcccCCCCC
Q psy10762         35 SPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPK   72 (126)
Q Consensus        35 ~~~~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   72 (126)
                      ..|.|..||..|...           ...+..|+.||.
T Consensus        27 v~Y~C~~CG~~~e~~-----------~~d~irCp~CG~   53 (70)
T 1twf_L           27 LKYICAECSSKLSLS-----------RTDAVRCKDCGH   53 (70)
T ss_dssp             CCEECSSSCCEECCC-----------TTSTTCCSSSCC
T ss_pred             EEEECCCCCCcceeC-----------CCCCccCCCCCc
Confidence            456777777665433           112346777765

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=88.65  E-value=0.44  Score=22.57  Aligned_cols=10  Identities=20%  Similarity=0.421  Sum_probs=4.7

Q ss_pred             cccCCccccc
Q psy10762         37 HHCNYCAKSF   46 (126)
Q Consensus        37 ~~c~~C~~~~   46 (126)
                      |.|..|+..+
T Consensus        22 Y~C~~Cg~~~   31 (63)
T 3h0g_L           22 YLCADCGARN   31 (63)
T ss_dssp             CBCSSSCCBC
T ss_pred             EECCCCCCee
Confidence            4444454444

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=88.21  E-value=0.16  Score=24.74  Aligned_cols=33  Identities=15%  Similarity=0.522  Sum_probs=14.4

Q ss_pred             CcccccCCchHHHHHHhhhcCCCCcccCCCCCcC
Q psy10762         41 YCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAF   74 (126)
Q Consensus        41 ~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~   74 (126)
                      .|+..+. ...|..|.......++..|+.|+..+
T Consensus        22 ~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~   54 (76)
T 2yuc_A           22 RCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDF   54 (76)
T ss_dssp             CCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCC
T ss_pred             cccHHhh-HhHHHhhCHhhCCCcceECCCCCCcc
Confidence            3544333 22344444433444444555555444

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=87.18  E-value=0.56  Score=27.81  Aligned_cols=30  Identities=23%  Similarity=0.409  Sum_probs=24.8

Q ss_pred             CCCccCcccccccCC-HHHHHHHHHHhhhcc
Q psy10762         90 ESPHKCTYCMKSFTR-KEHLTNHIRQHTVRR  119 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~~~~  119 (126)
                      ..+.+|..|+..|.+ -..|..|+..|-.+.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~~~~  197 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEYDDW  197 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHHHHH
Confidence            467899999999987 889999988876543

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=86.24  E-value=0.26  Score=28.29  Aligned_cols=25  Identities=24%  Similarity=0.618  Sum_probs=16.2

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccc
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMK  100 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  100 (126)
                      ..|.|+.||.++.             ++-|-.||+|+-
T Consensus       137 ~~~~C~~CG~i~~-------------~~~p~~CP~Cg~  161 (170)
T 3pwf_A          137 KVYICPICGYTAV-------------DEAPEYCPVCGA  161 (170)
T ss_dssp             CEEECTTTCCEEE-------------SCCCSBCTTTCC
T ss_pred             CeeEeCCCCCeeC-------------CCCCCCCCCCCC
Confidence            3477888877664             134557888873

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=83.65  E-value=0.74  Score=24.67  Aligned_cols=12  Identities=25%  Similarity=0.733  Sum_probs=6.8

Q ss_pred             cccCCcccccCC
Q psy10762         37 HHCNYCAKSFTR   48 (126)
Q Consensus        37 ~~c~~C~~~~~~   48 (126)
                      +.|..||..|..
T Consensus        74 ~~C~~CG~~~e~   85 (119)
T 2kdx_A           74 LECKDCSHVFKP   85 (119)
T ss_dssp             EECSSSSCEECS
T ss_pred             EEcCCCCCEEeC
Confidence            556666655543

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=83.63  E-value=2.1  Score=19.46  Aligned_cols=45  Identities=18%  Similarity=0.424  Sum_probs=21.3

Q ss_pred             ccCCcccccCCchHHHHHHhhhcCCCCcccCCCC-CcCCChhhHHHHHH
Q psy10762         38 HCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCP-KAFTRKDHLVNHVR   85 (126)
Q Consensus        38 ~c~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~-~~~~~~~~l~~h~~   85 (126)
                      .|+.|..-......|..|...-...   +||.|- ....+++.|+.|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            4555555555555555554433222   444442 22344555555544

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=82.58  E-value=1  Score=21.89  Aligned_cols=11  Identities=27%  Similarity=0.821  Sum_probs=6.1

Q ss_pred             CcccCCCCCcC
Q psy10762         64 PFPCQYCPKAF   74 (126)
Q Consensus        64 ~~~C~~C~~~~   74 (126)
                      .|.|..|++.|
T Consensus        44 IW~C~~C~~~~   54 (72)
T 3jyw_9           44 IWTCSCCKKTV   54 (72)
T ss_dssp             CBCCSSSCCCC
T ss_pred             eEECCCCCCEE
Confidence            45666665544

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=81.55  E-value=1.4  Score=26.14  Aligned_cols=26  Identities=23%  Similarity=0.526  Sum_probs=22.1

Q ss_pred             CCCcccCCCCCcCCC-hhhHHHHHHhh
Q psy10762         62 ETPFPCQYCPKAFTR-KDHLVNHVRRH   87 (126)
Q Consensus        62 ~~~~~C~~C~~~~~~-~~~l~~h~~~~   87 (126)
                      ..+..|..|+..|.+ ...|..|+..+
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            457899999999987 89999998765

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=80.46  E-value=0.22  Score=25.02  Aligned_cols=10  Identities=30%  Similarity=0.953  Sum_probs=5.2

Q ss_pred             CcccCCCCCc
Q psy10762         64 PFPCQYCPKA   73 (126)
Q Consensus        64 ~~~C~~C~~~   73 (126)
                      .|.|+.|+..
T Consensus        45 iW~C~~Cg~~   54 (83)
T 1vq8_Z           45 IWQCSYCDYK   54 (83)
T ss_dssp             EEEETTTCCE
T ss_pred             eEECCCCCCE
Confidence            4555555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	126
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.003
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	8e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	9e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	7e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	7e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (101), Expect = 1e-07
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
          H+GE P+ C  C KAF+R   LV H R HTGE
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (100), Expect = 2e-07
 Identities = 17/32 (53%), Positives = 20/32 (62%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
          H+GE P+ C  C K F+R   LV H R HTGE
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 3e-07
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          H+GE P+ C  C K+F+R   +V H+R HTGE
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (95), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 87  HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           H+GE P+ C  C K+F+R   L  H R HT
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 4e-07
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 60 TGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHKC 95
          +   P+ CQ C K F+R DHL  H+++ HT E PHKC
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 6e-06
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 4  TGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCN 40
          +   P+ C  C K F+R +HL  H++Q HT E PH C 
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 9e-06
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQ-HTGETPFPCQ 68
          +   P+ C  C K F+R DH+  H +Q HT E P  CQ
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.1 bits (71), Expect = 0.003
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 88  TGESPHKCTYCMKSFTRKEHLTNHIRQ-HT 116
           +   P+ C  C K F+R +HL  HI+Q HT
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHT 30

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 7e-07
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 62  ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
           +  +PCQ C K+FT K     H+  H G  P+ C  C K F  K HL  H++ H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 1e-05
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
          +  + C  C K+FT K     H+  H G  P+ C  C K F  K H+V H + H
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 4e-05
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 34 ESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH 87
          +  + C  C KSFT K     H   H G  P+ C  C K F  K HLV H++ H
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 9e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
          R H+GE P+ C  C   FT+   +  H+ +   E
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 8e-06
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 85  RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           R H+GE P++C  C   FT+   +  HI Q  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          R H+GE P+ C  C   FT+   M  H  Q   E
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
          H+GE P+ C  C   FT+   +  H+ Q   E
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
          R HTGE P+ C +C K F +K  L  H +R+   +
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 22/32 (68%)

Query: 85  RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           R HTGE P+ C++C K+F +K+ L  H +++ 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
          R HTGE P+ C++C K+F +K  +  H +++   
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES 35
          HTGE P+ C +C KTF +K+ L  H +++   +
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 8e-06
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
             R  TG  P +C  C +SF+R +HL  H ++H +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTG 89
            R  TG  PF C  C ++F+R DHL  H +RH  
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 7e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTG 61
            R  TG  P  C  C +SF+R DH+  H ++H  
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (74), Expect = 0.001
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTG 33
           TG  P +C  C ++F+R +HL  H ++H  
Sbjct: 6  STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 8e-06
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY 97
          P   C K+F  K HL  H++ H+    + C +
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 38 HCNYCAKSFTRKDHMVYHERQHTGETPFPCQY 69
              C KSF  K H+  H + H+    + C++
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 7e-05
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 11 CDYCAKTFTRKEHLVNHVRQHTGESPHHCNY 41
             C K+F  K+HL  H++ H+    + C +
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 9e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
           E Q      + C  C K+F+    L  H R HTGE
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 4e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
             Q      + C+ C KSF+    +  H R HTGE
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 83  HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
              +      +KC  C KSF+    L+ H R HT
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 7e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
                ++CD C K+F+    L  H R HTGE
Sbjct: 7  QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.8 bits (86), Expect = 2e-05
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
           F C+ C +AF R++HL  H R HT E
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.1 bits (84), Expect = 4e-05
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
             C+ C + F R+EHL  H R HT E
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.7 bits (83), Expect = 5e-05
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGE 62
             C  C ++F R++H+  H R HT E
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.1 bits (79), Expect = 2e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 92  PHKCTYCMKSFTRKEHLTNHIRQHT 116
              C  C ++F R+EHL  H R HT
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHT 26

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 87  HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
            +G+ P  C  C+ +FT K +   H++ HT
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
           +G+ PF C+ C  AFT K +   H++ HT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
           +G+ P  C  C  +FT K +   H + HT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 3  HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
           +G+ P  C  C   FT K +   H++ HT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (80), Expect = 1e-04
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTG 89
          + PF C+ C + F+R DHL  H+R HTG
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (80), Expect = 2e-04
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 90  ESPHKCTYCMKSFTRKEHLTNHIRQHT 116
           + P +C  CM++F+R +HLT HIR HT
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.1 bits (79), Expect = 2e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 34 ESPHHCNYCAKSFTRKDHMVYHERQHTG 61
          + P  C  C ++F+R DH+  H R HTG
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (78), Expect = 3e-04
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 6  ETPHRCDYCAKTFTRKEHLVNHVRQHTG 33
          + P +C  C + F+R +HL  H+R HTG
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 7e-04
 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 2/29 (6%)

Query: 8  PHRCDY--CAKTFTRKEHLVNHVRQHTGE 34
          PH+C +  C K+++R E+L  H+R HTGE
Sbjct: 2  PHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 64 PFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
          P  C +  C K+++R ++L  H+R HTGE
Sbjct: 2  PHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 36 PHHCNY--CAKSFTRKDHMVYHERQHTGE 62
          PH C +  C KS++R +++  H R HTGE
Sbjct: 2  PHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 8e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
           F C  CPK F R DHL  H++ H  +
Sbjct: 2  KFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.001
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 8  PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
             C  C K F R +HL  H++ H  +
Sbjct: 2  KFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGE 62
             C  C K F R DH+  H + H  +
Sbjct: 2  KFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.8 bits (70), Expect = 0.004
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 92  PHKCTYCMKSFTRKEHLTNHIRQHT 116
              C  C K F R +HL+ HI+ H 
Sbjct: 2   KFACPECPKRFMRSDHLSKHIKTHQ 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 62 ETPFPCQY--CPKAFTRKDHLVNHVRRHTGES 91
          + P+ C +  C KAF R   L+ H + H  ++
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.5 bits (72), Expect = 0.002
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 6  ETPHRCDY--CAKTFTRKEHLVNHVRQHTGES 35
          + P+ CD+  C K F R   L+ H + H  ++
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 30.8 bits (70), Expect = 0.004
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 90  ESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
           + P+ C +  C K+F R   L  H + H 
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 30.8 bits (70), Expect = 0.004
 Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 34 ESPHHCNY--CAKSFTRKDHMVYHERQHTGET 63
          + P+ C++  C K+F R   ++ H++ H  + 
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.6 bits (72), Expect = 0.002
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 8  PHRCDY--CAKTFTRKEHLVNHVRQHTGE 34
          P +C +  C K F+   +L  HVR HTG+
Sbjct: 2  PFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.003
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 64 PFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
          PF C +  C K F+   +L  HVR HTG+
Sbjct: 2  PFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.8 bits (70), Expect = 0.003
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 36 PHHCNY--CAKSFTRKDHMVYHERQHTGE 62
          P  C +  C K F+   ++  H R HTG+
Sbjct: 2  PFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (72), Expect = 0.002
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 8  PHRCDY--CAKTFTRKEHLVNHVRQHTGE 34
          P  C +  C K FTR + L  H R HTGE
Sbjct: 2  PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (72), Expect = 0.002
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 64 PFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
          PF C +  C K FTR D L  H R HTGE
Sbjct: 2  PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.8 bits (70), Expect = 0.004
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 36 PHHCNY--CAKSFTRKDHMVYHERQHTGE 62
          P  C +  C K FTR D +  H+R HTGE
Sbjct: 2  PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	126
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.83
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.76
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.61
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.6
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.56
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.53
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.51
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.51
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.5
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.49
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.46
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.44
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.43
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.42
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.37
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.34
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.31
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.31
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.28
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.24
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.23
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.22
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.12
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.06
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.88
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.79
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.71
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.71
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.57
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.48
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.47
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.46
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.43
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.41
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.38
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.37
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.27
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.26
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.26
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.26
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.21
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.2
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.2
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.16
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.14
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.13
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.07
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.96
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.87
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.84
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.82
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.8
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.76
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.67
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.66
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.66
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.61
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.59
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.54
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.53
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.48
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.43
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	97.42
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.39
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.38
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.28
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.26
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.25
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.24
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.23
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.07
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.05
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	97.02
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.96
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	96.91
d1y0jb1	36	U-shaped transcription factor, different fingers {	96.83
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.75
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.61
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.55
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.3
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.23
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.19
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.01
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.0
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.92
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.75
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.71
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	95.46
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.0
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.9
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.57
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	94.56
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.99
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	93.24
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	92.91
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.99
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.38
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.43
d1fu9a_	36	U-shaped transcription factor, different fingers {	89.85
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.89
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	87.92
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	86.28
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	86.22
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	85.76
d2akla2	38	Hypothetical protein PA0128, N-terminal domain {Ps	83.96
d1twfl_	46	RBP12 subunit of RNA polymerase II {Baker's yeast	83.83
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	82.88
d2dkta1	74	RING finger and CHY zinc finger domain-containing	82.41
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	81.66
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	80.96
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.96
d1zina2	35	Microbial and mitochondrial ADK, insert "zinc fing	80.68

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.3e-21  Score=89.77  Aligned_cols=53  Identities=38%  Similarity=0.761  Sum_probs=49.2

Q ss_pred             CCCcccCCCCCcCCChhhHHHHHHhhcCCCCccCcccccccCCHHHHHHHHHHh
Q psy10762         62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        62 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  115 (126)
                      ++||.| .||+.|.....|..|+++|++++||.|.+|++.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            579999 59999999999999999999999999999999999999999999886

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6e-19  Score=81.97  Aligned_cols=53  Identities=36%  Similarity=0.671  Sum_probs=37.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCCchHHHHHHhhh
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH   59 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~~l~~h~~~~   59 (126)
                      |++|.| +||+.|....+|..|+.+|++++||.|+.|+++|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            467777 37777777777777777777777777777777777777777776654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.7e-17  Score=70.04  Aligned_cols=37  Identities=30%  Similarity=0.459  Sum_probs=32.5

Q ss_pred             HHHHhhcCCCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        82 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +|+.+|++++||.|.+||++|...++|..|+++|++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4677889999999999999999999999999999875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.8e-16  Score=64.69  Aligned_cols=33  Identities=42%  Similarity=0.704  Sum_probs=30.0

Q ss_pred             hhcCCCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         86 RHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        86 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +|++++||.|.+|+++|.+.+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.2e-15  Score=64.43  Aligned_cols=35  Identities=37%  Similarity=0.673  Sum_probs=31.5

Q ss_pred             HhhcCCCCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        85 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      ++|+|++||.|.+|+++|...+.|.+|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            47899999999999999999999999999998753

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=2.6e-15  Score=62.57  Aligned_cols=32  Identities=31%  Similarity=0.722  Sum_probs=29.7

Q ss_pred             hcCCCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        87 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ++|++||.|.+|++.|.+.++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=2.4e-15  Score=63.87  Aligned_cols=35  Identities=37%  Similarity=0.758  Sum_probs=30.0

Q ss_pred             HHHhhcCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        83 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      |.++|++++||.|.+|+++|.+.+.|.+|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            46788999999999999999999999999988853

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=5.3e-15  Score=58.48  Aligned_cols=28  Identities=50%  Similarity=1.067  Sum_probs=26.0

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      |+||.|.+|++.|.+++.|.+|+++|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999985

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.50  E-value=6.6e-15  Score=58.88  Aligned_cols=29  Identities=38%  Similarity=0.813  Sum_probs=25.9

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +||.|.+|++.|.+.+.|.+|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58899999999999999999999999875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.6e-14  Score=59.32  Aligned_cols=33  Identities=52%  Similarity=0.887  Sum_probs=29.9

Q ss_pred             CCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         2 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      +|+|++||.|.+|++.|...++|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            689999999999999999999999999999864

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.1e-14  Score=58.08  Aligned_cols=29  Identities=34%  Similarity=0.782  Sum_probs=25.4

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +||.|.+|+++|.+++.|.+|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58889999999999999999999998875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.6e-14  Score=60.50  Aligned_cols=37  Identities=41%  Similarity=0.855  Sum_probs=29.6

Q ss_pred             CCcceeccccccccCChhHHHHHHH-hhcCCCCcccCC
Q psy10762          5 GETPHRCDYCAKTFTRKEHLVNHVR-QHTGESPHHCNY   41 (126)
Q Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~   41 (126)
                      .++||.|.+||+.|...++|..|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4678888888888888888888865 688888888763

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.7e-14  Score=60.46  Aligned_cols=35  Identities=51%  Similarity=1.058  Sum_probs=21.7

Q ss_pred             CCCcccCCCCCcCCChhhHHHHHH-hhcCCCCccCc
Q psy10762         62 ETPFPCQYCPKAFTRKDHLVNHVR-RHTGESPHKCT   96 (126)
Q Consensus        62 ~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~C~   96 (126)
                      ++||.|..|++.|.....|..|++ +|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            456666666666666666666654 46666666664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.8e-14  Score=60.00  Aligned_cols=33  Identities=36%  Similarity=0.696  Sum_probs=28.3

Q ss_pred             HhhcCCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        85 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ++|+||+||.|..|++.|...++|.+|++.++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            468999999999999999999999999765443

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.9e-14  Score=61.44  Aligned_cols=36  Identities=36%  Similarity=0.681  Sum_probs=29.3

Q ss_pred             HHhhhcCCCCcccCCCCCcCCChhhHHHHHHhhcCC
Q psy10762         55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        55 h~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      |+++|.+++||.|+.|+++|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            567788888888888888888888888888888775

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=8.1e-14  Score=58.64  Aligned_cols=34  Identities=38%  Similarity=0.615  Sum_probs=31.0

Q ss_pred             CCCCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      ++|+|++||.|.+|++.|...++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.9e-14  Score=54.09  Aligned_cols=26  Identities=46%  Similarity=0.778  Sum_probs=23.9

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +||.|.+||+.|..++.|..|+++||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=3.2e-13  Score=56.09  Aligned_cols=32  Identities=31%  Similarity=0.688  Sum_probs=29.4

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCC
Q psy10762          3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      |+|++||.|.+|++.|....+|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999999999865

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.34  E-value=1.5e-14  Score=64.44  Aligned_cols=40  Identities=25%  Similarity=0.606  Sum_probs=32.4

Q ss_pred             hHHHHHHhhcCCCCccCcc--cccccCCHHHHHHHHHHhhhcc
Q psy10762         79 HLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        79 ~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      .+..|+. +.+++||.|.+  |++.|...+.|.+|+++|++++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4445664 88889999976  9999999999999999998875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=9.9e-13  Score=55.15  Aligned_cols=33  Identities=30%  Similarity=0.548  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChhHHHHHHHhhcC
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      ++|+|++||.|+.|++.|....+|..|+..++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            479999999999999999999999999765443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=8.7e-13  Score=55.79  Aligned_cols=32  Identities=34%  Similarity=0.726  Sum_probs=25.3

Q ss_pred             CCCCCCcceeccccccccCChhHHHHHHHhhc
Q psy10762          1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         1 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      ++|+|++||.|.+|++.|...++|..|+++|.
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            46788888888888888888888888887775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=8e-13  Score=52.91  Aligned_cols=28  Identities=54%  Similarity=1.060  Sum_probs=24.7

Q ss_pred             CCccCcc--cccccCCHHHHHHHHHHhhhc
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +||.|..  |+++|...+.|.+|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5889987  999999999999999999875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.1e-12  Score=52.55  Aligned_cols=28  Identities=39%  Similarity=0.766  Sum_probs=24.9

Q ss_pred             CCccCcc--cccccCCHHHHHHHHHHhhhc
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +||.|..  |+++|...+.|.+|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5889977  999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.26  E-value=3e-12  Score=50.96  Aligned_cols=29  Identities=45%  Similarity=0.934  Sum_probs=22.6

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCC
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGES   91 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   91 (126)
                      +||.|+.|++.|.+.+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            47788888888888888888888887764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=2.8e-12  Score=50.51  Aligned_cols=28  Identities=43%  Similarity=1.079  Sum_probs=23.1

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcC
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      |+||.|++|++.|...++|..|+++|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888864

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=5.2e-12  Score=50.20  Aligned_cols=29  Identities=41%  Similarity=0.943  Sum_probs=21.4

Q ss_pred             CCcccCCCCCcCCChhhHHHHHHhhcCCC
Q psy10762         63 TPFPCQYCPKAFTRKDHLVNHVRRHTGES   91 (126)
Q Consensus        63 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   91 (126)
                      +||.|+.|++.|.+.+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.4e-12  Score=51.54  Aligned_cols=29  Identities=48%  Similarity=0.888  Sum_probs=24.2

Q ss_pred             CCccCc--ccccccCCHHHHHHHHHHhhhcc
Q psy10762         91 SPHKCT--YCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        91 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      +||.|+  .|+++|...+.|.+|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  49999999999999999988875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=9.2e-12  Score=47.82  Aligned_cols=26  Identities=42%  Similarity=0.834  Sum_probs=21.6

Q ss_pred             cceeccccccccCChhHHHHHHHhhc
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      +||.|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888774

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=1.1e-11  Score=50.24  Aligned_cols=29  Identities=31%  Similarity=0.698  Sum_probs=25.2

Q ss_pred             CCCccCcc--cccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTY--CMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      |+||.|..  |+++|...++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58899977  999999999999999998864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=1.4e-11  Score=48.80  Aligned_cols=27  Identities=44%  Similarity=0.800  Sum_probs=23.9

Q ss_pred             CCccCcc--cccccCCHHHHHHHHHHhhh
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  117 (126)
                      +||.|..  |+++|...+.|.+|+++|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5889977  99999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.9e-11  Score=51.04  Aligned_cols=27  Identities=33%  Similarity=0.657  Sum_probs=14.8

Q ss_pred             CCCcCCChhhHHHHHHhhcCCCCccCc
Q psy10762         70 CPKAFTRKDHLVNHVRRHTGESPHKCT   96 (126)
Q Consensus        70 C~~~~~~~~~l~~h~~~~~~~~~~~C~   96 (126)
                      |+++|.+...|.+|+++|++++||.|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            555555555555555555555555553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.06  E-value=2.7e-11  Score=53.70  Aligned_cols=32  Identities=22%  Similarity=0.570  Sum_probs=17.4

Q ss_pred             hcCCCCcccCC--cccccCCchHHHHHHhhhcCC
Q psy10762         31 HTGESPHHCNY--CAKSFTRKDHMVYHERQHTGE   62 (126)
Q Consensus        31 h~~~~~~~c~~--C~~~~~~~~~l~~h~~~~~~~   62 (126)
                      |.+++||.|++  |++.|...+.|..|+++|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            55555555544  555555555555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.4e-11  Score=47.58  Aligned_cols=26  Identities=35%  Similarity=0.801  Sum_probs=21.2

Q ss_pred             CCccCcc--cccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  116 (126)
                      +||.|..  |+++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788876  8888888888888888875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.2e-10  Score=48.49  Aligned_cols=32  Identities=31%  Similarity=0.685  Sum_probs=17.9

Q ss_pred             eeccc--cccccCChhHHHHHHHhhcCCCCcccC
Q psy10762          9 HRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN   40 (126)
Q Consensus         9 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~   40 (126)
                      |.|+.  |++.|.....|..|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44543  555555555555555555555555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=3.1e-10  Score=45.20  Aligned_cols=28  Identities=43%  Similarity=1.016  Sum_probs=21.4

Q ss_pred             CCcccCC--CCCcCCChhhHHHHHHhhcCC
Q psy10762         63 TPFPCQY--CPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        63 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      +||.|+.  |++.|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4777766  888888888888888887765

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=6.9e-10  Score=44.59  Aligned_cols=29  Identities=59%  Similarity=1.075  Sum_probs=21.7

Q ss_pred             CCcccC--CCCCcCCChhhHHHHHHhhcCCC
Q psy10762         63 TPFPCQ--YCPKAFTRKDHLVNHVRRHTGES   91 (126)
Q Consensus        63 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~   91 (126)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            467774  48888888888888888887764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4.7e-10  Score=44.72  Aligned_cols=28  Identities=46%  Similarity=0.941  Sum_probs=19.8

Q ss_pred             CCcccCC--CCCcCCChhhHHHHHHhhcCC
Q psy10762         63 TPFPCQY--CPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        63 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      +||.|+.  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677755  777777777777777777664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=8.1e-10  Score=41.69  Aligned_cols=27  Identities=30%  Similarity=0.704  Sum_probs=24.2

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhh
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |+||.|.+||+.|..+....+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999998874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.4e-09  Score=39.71  Aligned_cols=26  Identities=54%  Similarity=1.008  Sum_probs=22.0

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      |.+|.+|++.|+.+..|..|+|.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45788999999999999999888874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=5.2e-09  Score=40.01  Aligned_cols=29  Identities=34%  Similarity=0.725  Sum_probs=24.4

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ++||.|++|+.+|..+.-+.-|.|.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57899999999999988888888888653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.71  E-value=6.8e-09  Score=41.83  Aligned_cols=28  Identities=36%  Similarity=0.831  Sum_probs=21.6

Q ss_pred             Ccceeccc--cccccCChhHHHHHHHhhcC
Q psy10762          6 ETPHRCDY--CAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         6 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~   33 (126)
                      ++||.|..  |++.|...++|..|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            56788866  88888888888888877764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3.9e-09  Score=39.28  Aligned_cols=27  Identities=33%  Similarity=0.530  Sum_probs=23.4

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ...|.+||+.|..++.|.+|+-+|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357889999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=6.3e-09  Score=40.96  Aligned_cols=27  Identities=41%  Similarity=0.901  Sum_probs=18.7

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhcC
Q psy10762          7 TPHRCDY--CAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         7 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~   33 (126)
                      +||.|..  |++.|...++|..|+++|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677755  77777777777777776653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.3e-08  Score=39.57  Aligned_cols=26  Identities=31%  Similarity=0.864  Sum_probs=19.5

Q ss_pred             CCcccCC--CCCcCCChhhHHHHHHhhc
Q psy10762         63 TPFPCQY--CPKAFTRKDHLVNHVRRHT   88 (126)
Q Consensus        63 ~~~~C~~--C~~~~~~~~~l~~h~~~~~   88 (126)
                      +||.|+.  |++.|.+.+.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677765  8888888888888877764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=3.2e-08  Score=37.15  Aligned_cols=27  Identities=33%  Similarity=0.455  Sum_probs=22.6

Q ss_pred             ccCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      |.|+.|+......+-|++|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778888888888888888888888764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.6e-08  Score=36.53  Aligned_cols=28  Identities=39%  Similarity=0.655  Sum_probs=21.1

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ++||+|..|...-..++.|..|+|.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4677777777777777777777777775

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.47  E-value=5e-08  Score=35.18  Aligned_cols=24  Identities=42%  Similarity=0.764  Sum_probs=21.8

Q ss_pred             ccCcccccccCCHHHHHHHHHHhh
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=6.2e-08  Score=37.81  Aligned_cols=29  Identities=38%  Similarity=0.703  Sum_probs=16.1

Q ss_pred             eeccccccccCChhHHHHHHHhhcCCCCc
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTGESPH   37 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   37 (126)
                      ..|+.||+.|.....|..|...|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            44555555555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.43  E-value=1.1e-07  Score=35.72  Aligned_cols=26  Identities=35%  Similarity=0.841  Sum_probs=16.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhh
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      ++||.|..||+.|........|..+|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            45666666666666666666666555

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1.1e-07  Score=36.26  Aligned_cols=26  Identities=27%  Similarity=0.643  Sum_probs=18.2

Q ss_pred             CCccCcc--cccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  116 (126)
                      +||.|.+  |++++...++|++|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677765  7777777777777777544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1e-07  Score=34.69  Aligned_cols=25  Identities=52%  Similarity=1.132  Sum_probs=16.0

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      |.+|+.|++-|.....|..|++.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3456666666666666666666654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.4e-07  Score=36.81  Aligned_cols=28  Identities=36%  Similarity=0.795  Sum_probs=15.1

Q ss_pred             ccCCcccccCCchHHHHHHhhhcCCCCc
Q psy10762         38 HCNYCAKSFTRKDHMVYHERQHTGETPF   65 (126)
Q Consensus        38 ~c~~C~~~~~~~~~l~~h~~~~~~~~~~   65 (126)
                      .|..||+.|.+...|.+|..+|.+++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4555555555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.9e-07  Score=33.69  Aligned_cols=26  Identities=31%  Similarity=0.621  Sum_probs=20.9

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      +||+|..|...-...+.|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=4.2e-07  Score=34.61  Aligned_cols=28  Identities=43%  Similarity=0.879  Sum_probs=18.8

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcC
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      ++||.|++|+..|.....+..|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4567777777777777667777666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.26  E-value=3.4e-07  Score=37.48  Aligned_cols=30  Identities=23%  Similarity=0.614  Sum_probs=24.3

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhhccc
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTVRRV  120 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  120 (126)
                      +.|.|..|++.|.+.+.|--|++.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            568888888888888888888888876554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=3.9e-07  Score=37.54  Aligned_cols=27  Identities=30%  Similarity=0.732  Sum_probs=23.4

Q ss_pred             cCCCCccCcccccccCCHHHHHHHHHH
Q psy10762         88 TGESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        88 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      +|-+||.|..|++.|.++.++.+|.-.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            366899999999999999999999644

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=8.7e-07  Score=33.13  Aligned_cols=29  Identities=31%  Similarity=0.607  Sum_probs=25.4

Q ss_pred             CCCccCcccccccCCHHHHHHHHHHhhhc
Q psy10762         90 ESPHKCTYCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        90 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +..|.|..|...|..+..|+.|+..|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            46688999999999999999999999874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=7.1e-07  Score=33.22  Aligned_cols=27  Identities=33%  Similarity=0.746  Sum_probs=15.7

Q ss_pred             cceeccccccccCChhHHHHHHHhhcC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      +||+|..|...-...+.|..|.+.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            556666666555555556666555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=7.6e-07  Score=32.50  Aligned_cols=26  Identities=38%  Similarity=0.613  Sum_probs=19.3

Q ss_pred             cCcccccccCCHHHHHHHHHHhhhcc
Q psy10762         94 KCTYCMKSFTRKEHLTNHIRQHTVRR  119 (126)
Q Consensus        94 ~C~~C~~~f~~~~~l~~H~~~h~~~~  119 (126)
                      .|+.|.+.|.++-.|..|.|.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777777777777777777777764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.16  E-value=1.2e-06  Score=32.74  Aligned_cols=25  Identities=32%  Similarity=0.624  Sum_probs=20.0

Q ss_pred             CCccCcc--cccccCCHHHHHHHHHHh
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHIRQH  115 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~~~h  115 (126)
                      .||.|+.  |+++|+..+-|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677854  888888888888888876

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=1e-06  Score=32.62  Aligned_cols=25  Identities=40%  Similarity=0.735  Sum_probs=14.4

Q ss_pred             eeccccccccCChhHHHHHHHhhcC
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      ..|.+||+.|...+.|+.|+.+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3455666666665666666555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.1e-06  Score=33.42  Aligned_cols=26  Identities=31%  Similarity=0.738  Sum_probs=18.4

Q ss_pred             CCcccCC--CCCcCCChhhHHHHHHhhc
Q psy10762         63 TPFPCQY--CPKAFTRKDHLVNHVRRHT   88 (126)
Q Consensus        63 ~~~~C~~--C~~~~~~~~~l~~h~~~~~   88 (126)
                      +||.|..  |++.|...++|.+|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677765  7777777777777777654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=3.1e-06  Score=31.66  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=17.9

Q ss_pred             cccCCCCCcCCChhhHHHHHHhhcCC
Q psy10762         65 FPCQYCPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        65 ~~C~~C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      |.|+.|+....-++.|++|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56667776666677777777777665

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=5e-06  Score=30.64  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=18.2

Q ss_pred             cceeccccccccCChhHHHHHHHhhc
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      +||+|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777777664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=1.2e-05  Score=29.27  Aligned_cols=26  Identities=46%  Similarity=0.717  Sum_probs=18.0

Q ss_pred             ccCCCCCcCCChhhHHHHHHhhcCCC
Q psy10762         66 PCQYCPKAFTRKDHLVNHVRRHTGES   91 (126)
Q Consensus        66 ~C~~C~~~~~~~~~l~~h~~~~~~~~   91 (126)
                      +|+.|.+.|.+..-|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            56777777777777777777776653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=1.5e-05  Score=29.68  Aligned_cols=27  Identities=37%  Similarity=0.695  Sum_probs=18.1

Q ss_pred             cceeccccccccCChhHHHHHHHhhcC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      .-|.|..|..+|...-.|..|+..|++
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            346677777777777667777766654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=7.9e-06  Score=33.55  Aligned_cols=26  Identities=35%  Similarity=0.813  Sum_probs=18.2

Q ss_pred             CCCCcccCCCCCcCCChhhHHHHHHh
Q psy10762         61 GETPFPCQYCPKAFTRKDHLVNHVRR   86 (126)
Q Consensus        61 ~~~~~~C~~C~~~~~~~~~l~~h~~~   86 (126)
                      |-+||.|..|++.|....+|.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            55677777777777777777777643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.80  E-value=5.9e-06  Score=31.66  Aligned_cols=25  Identities=36%  Similarity=0.871  Sum_probs=20.8

Q ss_pred             CccCcccccccCCHHHHHHHHHH-hh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQ-HT  116 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~-h~  116 (126)
                      ||.|.+|++.|+.+.-|.+|... |.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68899999999999999999654 44

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=2e-06  Score=33.01  Aligned_cols=26  Identities=31%  Similarity=0.669  Sum_probs=14.4

Q ss_pred             CCccCcc--cccccCCHHHHHHHH-HHhh
Q psy10762         91 SPHKCTY--CMKSFTRKEHLTNHI-RQHT  116 (126)
Q Consensus        91 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  116 (126)
                      +||.|..  |.|.|+..++--+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3555544  666666655555564 4443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.67  E-value=3e-05  Score=31.59  Aligned_cols=28  Identities=21%  Similarity=0.604  Sum_probs=17.5

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTGE   34 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   34 (126)
                      +.|.|..|++.|.+...|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4566666666666666666666666443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2.8e-05  Score=31.45  Aligned_cols=27  Identities=37%  Similarity=0.759  Sum_probs=17.8

Q ss_pred             CCCccCc--ccccccCCHHHHHHHHHHhh
Q psy10762         90 ESPHKCT--YCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        90 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~  116 (126)
                      ++||.|.  -|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            5677773  37777777777776665553

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2.6e-05  Score=29.08  Aligned_cols=24  Identities=33%  Similarity=0.848  Sum_probs=18.0

Q ss_pred             ceeccccccccCChhHHHHHHHhh
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      ||.|..|...|....+|..|+..-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577888888888888888877653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.61  E-value=2.9e-05  Score=28.88  Aligned_cols=25  Identities=32%  Similarity=0.715  Sum_probs=19.3

Q ss_pred             CCcccCC--CCCcCCChhhHHHHHHhh
Q psy10762         63 TPFPCQY--CPKAFTRKDHLVNHVRRH   87 (126)
Q Consensus        63 ~~~~C~~--C~~~~~~~~~l~~h~~~~   87 (126)
                      .||.|+.  |++.|...+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677875  888888888888887765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.7e-05  Score=29.02  Aligned_cols=23  Identities=48%  Similarity=0.944  Sum_probs=20.5

Q ss_pred             CccCcccccccCCHHHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      ||.|..|+..|..+.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3.2e-05  Score=28.95  Aligned_cols=24  Identities=25%  Similarity=0.571  Sum_probs=15.8

Q ss_pred             CCccCcccccccCCHHHHHHHHHH
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      +||.|..|...-...++|..|+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            466666666666666667766655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.54  E-value=3.5e-05  Score=27.54  Aligned_cols=22  Identities=36%  Similarity=0.836  Sum_probs=19.1

Q ss_pred             CccCcccccccCCHHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~  113 (126)
                      ||+|..|...|.++.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999999999999998864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.2e-05  Score=28.32  Aligned_cols=27  Identities=26%  Similarity=0.656  Sum_probs=21.4

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      +||+|..|...-.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            578888888888888888888776443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=6e-05  Score=27.76  Aligned_cols=26  Identities=38%  Similarity=0.606  Sum_probs=22.0

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      |-+|+.|..+.++...|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            45799999999999999999998853

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.43  E-value=5.7e-05  Score=26.97  Aligned_cols=23  Identities=35%  Similarity=0.794  Sum_probs=12.3

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      |+|..|...|-..+.|..|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=6.1e-05  Score=26.88  Aligned_cols=22  Identities=32%  Similarity=0.812  Sum_probs=18.9

Q ss_pred             ceeccccccccCChhHHHHHHH
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVR   29 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~   29 (126)
                      ||+|..|+..|-...+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999999988888888874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=5.8e-05  Score=29.50  Aligned_cols=26  Identities=27%  Similarity=0.576  Sum_probs=21.8

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      .|.|..|++.|..+..+.+|...-++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58899999999999999999776554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=4.3e-05  Score=29.22  Aligned_cols=27  Identities=30%  Similarity=0.704  Sum_probs=19.8

Q ss_pred             cceeccc--cccccCChhHHHHHH-HhhcC
Q psy10762          7 TPHRCDY--CAKTFTRKEHLVNHV-RQHTG   33 (126)
Q Consensus         7 ~~~~C~~--C~~~f~~~~~l~~h~-~~h~~   33 (126)
                      +||.|+.  |.+.|...++-.+|+ ++|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5788866  888888888877886 55543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=5.7e-05  Score=28.18  Aligned_cols=26  Identities=46%  Similarity=0.724  Sum_probs=14.8

Q ss_pred             CccCcc--cccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKCTY--CMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ||.|..  |.+.|.+.-.|.+|.-.|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455533  66666666666666555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=9.6e-05  Score=27.59  Aligned_cols=24  Identities=25%  Similarity=0.786  Sum_probs=15.6

Q ss_pred             cceeccccccccCChhHHHHHHHh
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      +||+|..|+..-.+.++|..|+..
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            366666666666666666666654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00018  Score=26.90  Aligned_cols=24  Identities=21%  Similarity=0.574  Sum_probs=14.1

Q ss_pred             cceeccccccccCChhHHHHHHHh
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      +||.|..|...-...++|..|+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            356666666555555666666554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00019  Score=28.97  Aligned_cols=28  Identities=32%  Similarity=0.740  Sum_probs=20.2

Q ss_pred             CCcceec--cccccccCChhHHHHHHHhhc
Q psy10762          5 GETPHRC--DYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         5 ~~~~~~C--~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      +++||.|  +-|+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4677888  447778887777777776664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00013  Score=30.95  Aligned_cols=26  Identities=38%  Similarity=0.565  Sum_probs=22.9

Q ss_pred             CccCcccccccCCHHHHHHHHHHhhh
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      .|.|..|+|.|.....|+.|...|..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47899999999999999999888764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.24  E-value=0.00014  Score=25.99  Aligned_cols=22  Identities=41%  Similarity=1.008  Sum_probs=19.4

Q ss_pred             ccCcccccccCCHHHHHHHHHH
Q psy10762         93 HKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6799999999999999998766

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.23  E-value=0.00014  Score=27.10  Aligned_cols=28  Identities=54%  Similarity=1.029  Sum_probs=18.5

Q ss_pred             CCcccCC--CCCcCCChhhHHHHHHhhcCC
Q psy10762         63 TPFPCQY--CPKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        63 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   90 (126)
                      +||.|..  |.++|.+...|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3566654  777777777777777666653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00029  Score=25.71  Aligned_cols=21  Identities=43%  Similarity=0.825  Sum_probs=15.3

Q ss_pred             CccCcccccccCCHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHI  112 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~  112 (126)
                      ||.|..||+.+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            567777887777777777774

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.07  E-value=0.00026  Score=27.01  Aligned_cols=23  Identities=35%  Similarity=0.938  Sum_probs=15.0

Q ss_pred             ceeccccccccCChhHHHHHHHh
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      ||.|.+|+..|.....+..|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            56677777777766666666543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.05  E-value=0.0002  Score=26.12  Aligned_cols=21  Identities=43%  Similarity=0.915  Sum_probs=13.1

Q ss_pred             ceeccccccccCChhHHHHHH
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHV   28 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~   28 (126)
                      ||.|..||+-+....+|..|-
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            456666666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.02  E-value=0.00026  Score=27.68  Aligned_cols=29  Identities=21%  Similarity=0.498  Sum_probs=23.6

Q ss_pred             CCCCccCcccccccCCHHHHHHHHHHhhh
Q psy10762         89 GESPHKCTYCMKSFTRKEHLTNHIRQHTV  117 (126)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  117 (126)
                      ++..|+|.+|.+.+..-+++.+|....+.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            45678999999999999999999776443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00027  Score=27.89  Aligned_cols=20  Identities=30%  Similarity=0.534  Sum_probs=14.8

Q ss_pred             ccccCCHHHHHHHHHHhhhc
Q psy10762         99 MKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        99 ~~~f~~~~~l~~H~~~h~~~  118 (126)
                      ++.|...-.|..|+|+||++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45577777888888888764

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0008  Score=24.98  Aligned_cols=26  Identities=19%  Similarity=0.370  Sum_probs=21.2

Q ss_pred             ceeccccccccCChhHHHHHHHhhcC
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      .|.|..||+...+...++.|...-++
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47899999999998888888876554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.83  E-value=0.00039  Score=26.83  Aligned_cols=22  Identities=23%  Similarity=0.401  Sum_probs=18.3

Q ss_pred             CccCcccccccCCHHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIR  113 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~  113 (126)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4788889999999999888853

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.75  E-value=0.00099  Score=25.15  Aligned_cols=28  Identities=21%  Similarity=0.461  Sum_probs=22.8

Q ss_pred             CCccCc--ccccccCCHHHHHHHHHHhhhc
Q psy10762         91 SPHKCT--YCMKSFTRKEHLTNHIRQHTVR  118 (126)
Q Consensus        91 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  118 (126)
                      +.|.|.  .|+-.|.....|..|+-.||++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            567774  5889999999999999988875

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00073  Score=24.85  Aligned_cols=20  Identities=25%  Similarity=0.552  Sum_probs=16.1

Q ss_pred             ccccccCCHHHHHHHHHHhh
Q psy10762         97 YCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        97 ~C~~~f~~~~~l~~H~~~h~  116 (126)
                      -|++.|...+.+++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            38888888888888887774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.55  E-value=0.0014  Score=23.34  Aligned_cols=22  Identities=41%  Similarity=0.895  Sum_probs=19.0

Q ss_pred             eeccccccccCChhHHHHHHHh
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQ   30 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~   30 (126)
                      |.|+.|-+.|....++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999888764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0019  Score=25.10  Aligned_cols=26  Identities=35%  Similarity=0.805  Sum_probs=21.1

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcC
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTG   89 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~   89 (126)
                      .|.|..|++.|.+...+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888877665

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.23  E-value=0.0025  Score=23.03  Aligned_cols=24  Identities=33%  Similarity=0.589  Sum_probs=19.2

Q ss_pred             ccC--cccccccCCHHHHHHHHHHhh
Q psy10762         93 HKC--TYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        93 ~~C--~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      |.|  ..|++.|.....|..|+..|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            556  349999999999999988876

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0041  Score=22.72  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=14.6

Q ss_pred             eeccccccccCChhHHHHHHHhhc
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      -+|++|+..-.+...|..|-++|.
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            456666666666666666665553

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0026  Score=26.85  Aligned_cols=25  Identities=36%  Similarity=0.607  Sum_probs=19.1

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q psy10762          8 PHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         8 ~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      .|.|..|++.|.....|..|-..|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4678888888888888888876663

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0032  Score=22.94  Aligned_cols=23  Identities=30%  Similarity=0.619  Sum_probs=18.5

Q ss_pred             CccCcccccccCCHHHHHHHHHH
Q psy10762         92 PHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      .|.|+.|+-....+++|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36788888888888888888765

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.92  E-value=0.0048  Score=25.94  Aligned_cols=26  Identities=23%  Similarity=0.611  Sum_probs=21.2

Q ss_pred             CCCCccCcccccccCCHHHHHHHHHH
Q psy10762         89 GESPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      .+.|-.|++|+-...++.+|++|+..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            46778888888888888888888765

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0045  Score=24.26  Aligned_cols=20  Identities=50%  Similarity=0.758  Sum_probs=13.3

Q ss_pred             CCcCCChhhHHHHHHhhcCC
Q psy10762         71 PKAFTRKDHLVNHVRRHTGE   90 (126)
Q Consensus        71 ~~~~~~~~~l~~h~~~~~~~   90 (126)
                      ++.|.....|..|++.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            44566667777777777664

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.71  E-value=0.0039  Score=23.95  Aligned_cols=25  Identities=20%  Similarity=0.297  Sum_probs=19.5

Q ss_pred             cceeccccccccCChhHHHHHHHhh
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQH   31 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h   31 (126)
                      ..|.|.-||..|.+.+.|..|+...
T Consensus         7 arf~c~pcgirfss~stleahqtyy   31 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTTT
T ss_pred             cceeccccceeecChhHHHhhhhee
Confidence            3478888888888888888887543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0015  Score=30.28  Aligned_cols=24  Identities=29%  Similarity=0.697  Sum_probs=19.6

Q ss_pred             CCccCcccccccCCHHHHHHHHHH
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      -.|-|..|++.|.+...|..|++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347788999999999899888755

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.00  E-value=0.016  Score=22.47  Aligned_cols=28  Identities=25%  Similarity=0.606  Sum_probs=23.1

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhc
Q psy10762          5 GETPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      |+..|.|..|.+++...+++..|..+.+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4567999999999999999999876544

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.90  E-value=0.024  Score=23.73  Aligned_cols=25  Identities=16%  Similarity=0.393  Sum_probs=14.5

Q ss_pred             CCcccCCcccccCCchHHHHHHhhh
Q psy10762         35 SPHHCNYCAKSFTRKDHMVYHERQH   59 (126)
Q Consensus        35 ~~~~c~~C~~~~~~~~~l~~h~~~~   59 (126)
                      .|..|++|+....+...|.+|...-
T Consensus        23 qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH
Confidence            3556666666666666666665443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.021  Score=25.88  Aligned_cols=37  Identities=22%  Similarity=0.501  Sum_probs=18.1

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCcccCCcccc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKS   45 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~   45 (126)
                      ...|.|+.|++.|......   +-.-.....|.|..|+..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~---~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEAN---QLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHH---HHEETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHH---HhcCcCCCeEEecCCCCE
Confidence            3456677776666444322   212222234666666543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.028  Score=25.36  Aligned_cols=27  Identities=19%  Similarity=0.530  Sum_probs=20.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhc
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      ...|.|..|...|.+...|..|...|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            445788888888888888888877664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.0068  Score=28.04  Aligned_cols=24  Identities=38%  Similarity=0.659  Sum_probs=18.1

Q ss_pred             CcceeccccccccCChhHHHHHHH
Q psy10762          6 ETPHRCDYCAKTFTRKEHLVNHVR   29 (126)
Q Consensus         6 ~~~~~C~~C~~~f~~~~~l~~h~~   29 (126)
                      ...|-|..|++.|.+...|..|.+
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345778888888888888887764

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.24  E-value=0.019  Score=23.14  Aligned_cols=10  Identities=20%  Similarity=0.657  Sum_probs=5.2

Q ss_pred             CcccCCCCCc
Q psy10762         64 PFPCQYCPKA   73 (126)
Q Consensus        64 ~~~C~~C~~~   73 (126)
                      .|.|+.||..
T Consensus         5 ~~~C~vCG~i   14 (37)
T d1nnqa2           5 VYICPICGYT   14 (37)
T ss_dssp             EEECTTTCCE
T ss_pred             EEECCCCCCE
Confidence            3555555543

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.063  Score=20.85  Aligned_cols=24  Identities=21%  Similarity=0.624  Sum_probs=20.6

Q ss_pred             CCccCcccccccCCHHHHHHHHHH
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      +.|.|..|-+-..+...|.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            568999999999999999999764

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.99  E-value=0.089  Score=23.67  Aligned_cols=26  Identities=27%  Similarity=0.553  Sum_probs=16.2

Q ss_pred             CCccCcccccccCCHHHHHHHHHHhh
Q psy10762         91 SPHKCTYCMKSFTRKEHLTNHIRQHT  116 (126)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~h~  116 (126)
                      ..|.|..|...|.+-..|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34666666666666666666665554

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.38  E-value=0.11  Score=18.91  Aligned_cols=18  Identities=22%  Similarity=0.491  Sum_probs=12.7

Q ss_pred             ccccccCCHHHHHHHHHH
Q psy10762         97 YCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        97 ~C~~~f~~~~~l~~H~~~  114 (126)
                      -|++-|++++.|..|.+-
T Consensus         7 gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTCCEESSHHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHHH
Confidence            478888888777666543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.43  E-value=0.066  Score=21.34  Aligned_cols=7  Identities=43%  Similarity=1.236  Sum_probs=3.1

Q ss_pred             cccCCcc
Q psy10762         37 HHCNYCA   43 (126)
Q Consensus        37 ~~c~~C~   43 (126)
                      |.|+.||
T Consensus         6 ~vC~vCG   12 (36)
T d1yuza2           6 HLCPICG   12 (36)
T ss_dssp             EECSSSC
T ss_pred             EECCCCC
Confidence            4444444

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.85  E-value=0.21  Score=19.47  Aligned_cols=23  Identities=17%  Similarity=0.375  Sum_probs=18.8

Q ss_pred             eccccccccCChhHHHHHHHhhc
Q psy10762         10 RCDYCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus        10 ~C~~C~~~f~~~~~l~~h~~~h~   32 (126)
                      -|..|...|.+...+..|.+...
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~YC   32 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTS
T ss_pred             HHhhCCceehhHHHHHHHHHhcc
Confidence            48889999999999988876554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.89  E-value=0.27  Score=17.92  Aligned_cols=25  Identities=28%  Similarity=0.574  Sum_probs=17.0

Q ss_pred             ceecc--ccccccCChhHHHHHHHhhc
Q psy10762          8 PHRCD--YCAKTFTRKEHLVNHVRQHT   32 (126)
Q Consensus         8 ~~~C~--~C~~~f~~~~~l~~h~~~h~   32 (126)
                      .|.|.  .|...|....++..|...-+
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            45664  47778888888888775443

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=87.92  E-value=0.075  Score=22.33  Aligned_cols=7  Identities=29%  Similarity=0.710  Sum_probs=4.3

Q ss_pred             ccCcccc
Q psy10762         93 HKCTYCM   99 (126)
Q Consensus        93 ~~C~~C~   99 (126)
                      |.|++|+
T Consensus        30 w~CP~C~   36 (45)
T d6rxna_          30 WCCPVCG   36 (45)
T ss_dssp             CBCTTTC
T ss_pred             CCCcCCC
Confidence            5666665

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=86.28  E-value=0.14  Score=20.46  Aligned_cols=9  Identities=0%  Similarity=0.002  Sum_probs=5.0

Q ss_pred             ecccccccc
Q psy10762         10 RCDYCAKTF   18 (126)
Q Consensus        10 ~C~~C~~~f   18 (126)
                      .|+.||..|
T Consensus         4 vc~~cG~~Y   12 (37)
T d2ak3a2           4 IHPGSGRVY   12 (37)
T ss_dssp             EETTTTEEE
T ss_pred             eeCCcCChh
Confidence            455555555

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.22  E-value=0.21  Score=24.91  Aligned_cols=28  Identities=25%  Similarity=0.698  Sum_probs=17.4

Q ss_pred             CcccCCCCCcCCChhhHHHHHHhhcCCCCccCccccccc
Q psy10762         64 PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSF  102 (126)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  102 (126)
                      |-.|..||.+|...           -.+|-+|+.|...+
T Consensus        67 Pp~CrkCGfvFr~~-----------~kkPSRCP~CKSE~   94 (105)
T d2gmga1          67 PAQCRKCGFVFKAE-----------INIPSRCPKCKSEW   94 (105)
T ss_dssp             CCBBTTTCCBCCCC-----------SSCCSSCSSSCCCC
T ss_pred             ChhhhhcCCeeccc-----------CCCCCCCCCCCCcc
Confidence            45788888777321           13566788876554

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.76  E-value=0.37  Score=18.70  Aligned_cols=21  Identities=24%  Similarity=0.539  Sum_probs=13.6

Q ss_pred             cCcccccccCCHHHHHHHHHH
Q psy10762         94 KCTYCMKSFTRKEHLTNHIRQ  114 (126)
Q Consensus        94 ~C~~C~~~f~~~~~l~~H~~~  114 (126)
                      .|.+|-+.|.+.-..-+|+..
T Consensus         5 tclecmrtfkssfsiwrhqve   25 (41)
T d1wjpa3           5 TCLECMRTFKSSFSIWRHQVE   25 (41)
T ss_dssp             EEGGGTEECSSHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhhhe
Confidence            466777777776666666543

>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: PhnA zinc-binding domain
domain: Hypothetical protein PA0128, N-terminal domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.96  E-value=0.25  Score=19.76  Aligned_cols=13  Identities=15%  Similarity=0.534  Sum_probs=7.2

Q ss_pred             CCccCcccccccC
Q psy10762         91 SPHKCTYCMKSFT  103 (126)
Q Consensus        91 ~~~~C~~C~~~f~  103 (126)
                      ..++|+.|+..+.
T Consensus        19 ~l~vCPeC~hEW~   31 (38)
T d2akla2          19 ALLVCPECAHEWS   31 (38)
T ss_dssp             SSEEETTTTEEEC
T ss_pred             CEEECCcccCcCC
Confidence            4456666665443

>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: RNA polymerase subunits
family: RBP12 subunit of RNA polymerase II
domain: RBP12 subunit of RNA polymerase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.83  E-value=0.57  Score=19.52  Aligned_cols=31  Identities=13%  Similarity=0.381  Sum_probs=17.6

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCcccCCcccccCC
Q psy10762          7 TPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTR   48 (126)
Q Consensus         7 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~   48 (126)
                      -.|.|.+|+....-..           ..+..|..||.....
T Consensus         3 v~YiCgeCg~~~~l~~-----------~d~irCreCG~RIlY   33 (46)
T d1twfl_           3 LKYICAECSSKLSLSR-----------TDAVRCKDCGHRILL   33 (46)
T ss_dssp             CCEECSSSCCEECCCT-----------TSTTCCSSSCCCCCB
T ss_pred             eEEEcccCCCceEeCC-----------CCcEEeccCCcEEEE
Confidence            3577777776553322           135667777765443

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=82.88  E-value=0.34  Score=26.40  Aligned_cols=24  Identities=33%  Similarity=0.710  Sum_probs=18.6

Q ss_pred             eeccccccccCChhHHHHHHHhhcC
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHTG   33 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~~   33 (126)
                      |+|..||+ +-...++..|++.|..
T Consensus       147 YKCe~CgK-YvDie~~~~H~k~HG~  170 (218)
T d2czra1         147 YKCEECGK-YVDIENLEAHLREHGI  170 (218)
T ss_dssp             EECTTTCC-EEEGGGHHHHHHTTTC
T ss_pred             eehhhcCc-eecHHHHHHHHHHcCc
Confidence            78888887 5566788888887754

>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: CHY zinc finger-like
superfamily: CHY zinc finger-like
family: CHY zinc finger
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.41  E-value=0.16  Score=23.72  Aligned_cols=36  Identities=19%  Similarity=0.352  Sum_probs=17.9

Q ss_pred             eeccccccccCChhHHHHHHHhhc----CCCCcccCCcccc
Q psy10762          9 HRCDYCAKTFTRKEHLVNHVRQHT----GESPHHCNYCAKS   45 (126)
Q Consensus         9 ~~C~~C~~~f~~~~~l~~h~~~h~----~~~~~~c~~C~~~   45 (126)
                      ..|..||..+.-..- ..-+..|.    ....+.|..|+..
T Consensus        21 l~C~~Cg~~~~C~~C-~~~lt~H~~~~k~~~~l~CH~Cg~~   60 (74)
T d2dkta1          21 LKAPCCDKLYTCRLC-HDTNEDHQLDRFKVKEVQCINCEKL   60 (74)
T ss_dssp             EEETTTTEEESSHHH-HHHTSSSCCCSSSCCCEEESSSCCE
T ss_pred             EEcCcCcCeeeCCCC-CCcccccccccccCCEEEeccCCCc
Confidence            446667776655422 11122332    2345667777654

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.66  E-value=0.32  Score=19.48  Aligned_cols=9  Identities=0%  Similarity=0.124  Sum_probs=5.1

Q ss_pred             ecccccccc
Q psy10762         10 RCDYCAKTF   18 (126)
Q Consensus        10 ~C~~C~~~f   18 (126)
                      .|+.||..|
T Consensus         4 ~C~~cG~~Y   12 (38)
T d1akya2           4 IHPASGRSY   12 (38)
T ss_dssp             ECTTTCCEE
T ss_pred             CCcCccchh
Confidence            455566555

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.96  E-value=0.74  Score=16.07  Aligned_cols=19  Identities=32%  Similarity=0.585  Sum_probs=13.1

Q ss_pred             cCcccccccCCHHHHHHHH
Q psy10762         94 KCTYCMKSFTRKEHLTNHI  112 (126)
Q Consensus        94 ~C~~C~~~f~~~~~l~~H~  112 (126)
                      .|+.|..+|.+...-..|.
T Consensus         2 vcpycslrf~sp~lk~ehe   20 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHE   20 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHH
T ss_pred             CCCcceeeeCCHHHhhHhh
Confidence            4788888888875545553

>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.68  E-value=0.21  Score=19.67  Aligned_cols=9  Identities=33%  Similarity=0.984  Sum_probs=5.2

Q ss_pred             ecccccccc
Q psy10762         10 RCDYCAKTF   18 (126)
Q Consensus        10 ~C~~C~~~f   18 (126)
                      .|+.||..|
T Consensus         4 ~C~~CG~~Y   12 (35)
T d1zina2           4 ICRNCGATY   12 (35)
T ss_dssp             EETTTCCEE
T ss_pred             CCcCcCchh
Confidence            455666555