Psyllid ID: psy10773
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 290 | ||||||
| 332016446 | 364 | Neutral ceramidase [Acromyrmex echinatio | 0.710 | 0.565 | 0.493 | 1e-68 | |
| 345481479 | 713 | PREDICTED: neutral ceramidase-like isofo | 0.706 | 0.287 | 0.470 | 8e-66 | |
| 383856233 | 713 | PREDICTED: neutral ceramidase-like [Mega | 0.7 | 0.284 | 0.452 | 5e-60 | |
| 322793202 | 351 | hypothetical protein SINV_00811 [Solenop | 0.706 | 0.584 | 0.463 | 2e-59 | |
| 322801423 | 716 | hypothetical protein SINV_05070 [Solenop | 0.768 | 0.311 | 0.441 | 6e-59 | |
| 242018358 | 740 | Neutral ceramidase precursor, putative [ | 0.703 | 0.275 | 0.452 | 1e-58 | |
| 170039952 | 707 | ceramidase [Culex quinquefasciatus] gi|1 | 0.710 | 0.291 | 0.437 | 2e-58 | |
| 118779266 | 709 | AGAP000973-PA [Anopheles gambiae str. PE | 0.551 | 0.225 | 0.607 | 3e-57 | |
| 270000905 | 1388 | hypothetical protein TcasGA2_TC011169 [T | 0.710 | 0.148 | 0.440 | 1e-56 | |
| 189241575 | 694 | PREDICTED: similar to AGAP000973-PA [Tri | 0.710 | 0.296 | 0.433 | 5e-56 |
| >gi|332016446|gb|EGI57359.1| Neutral ceramidase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/286 (49%), Positives = 173/286 (60%), Gaps = 80/286 (27%)
Query: 1 MGYAKMEQKGVGIHLRLFSRAFIIDDGERRFVFVSVDSGMIGYNIRAE------------ 48
MGYAKMEQKG G+HLR F+RAFIIDDG RFVFVSVD+ MIG +IR E
Sbjct: 50 MGYAKMEQKGNGLHLRTFARAFIIDDGTERFVFVSVDNAMIGNDIRQEVLRKLKTQFGDM 109
Query: 49 ------SISRAH----------------------------------NNLQK-------GR 61
IS H N++Q+ GR
Sbjct: 110 YTENNVMISSTHTHSAPGGFMLDMLFDLTTFGFIRESFDAVVNGITNSIQRAHNAVVPGR 169
Query: 62 LFVSKGELLDANINRSPTAYLQNPEEERMRYEHDVDKGMVQLQFISAEDRPLGVINWFAV 121
+F+ G++LDANINRSP AYL NP+ ER +Y++DVDK + Q+QFI A+D+PLGVINWFAV
Sbjct: 170 IFIIHGKVLDANINRSPQAYLNNPKSEREKYKYDVDKTLTQMQFIGADDKPLGVINWFAV 229
Query: 122 HPTSMNNTNRLVSSDN--------------------GKFVAAFASTNLGDVSPNIKGPKC 161
HPTSMNNTNRLVSSDN G+FVAAFASTNLGDVSPNI+GPKC
Sbjct: 230 HPTSMNNTNRLVSSDNVGYASILFEKMMNNNAMVGKGRFVAAFASTNLGDVSPNIRGPKC 289
Query: 162 LLTGVDCDIDTSACPKQGDSCVASGPGRDMFESTRLIAERMYRKAL 207
+G +C D CP + + C ASGPG+DMF+ST +IA R+Y +++
Sbjct: 290 EFSGQNCS-DQYTCPGKKEMCFASGPGKDMFDSTSIIAHRIYEESM 334
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345481479|ref|XP_001606211.2| PREDICTED: neutral ceramidase-like isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|383856233|ref|XP_003703614.1| PREDICTED: neutral ceramidase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|322793202|gb|EFZ16859.1| hypothetical protein SINV_00811 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|322801423|gb|EFZ22084.1| hypothetical protein SINV_05070 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|242018358|ref|XP_002429644.1| Neutral ceramidase precursor, putative [Pediculus humanus corporis] gi|212514629|gb|EEB16906.1| Neutral ceramidase precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|170039952|ref|XP_001847780.1| ceramidase [Culex quinquefasciatus] gi|167863560|gb|EDS26943.1| ceramidase [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|118779266|ref|XP_309165.3| AGAP000973-PA [Anopheles gambiae str. PEST] gi|116131849|gb|EAA04917.3| AGAP000973-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|270000905|gb|EEZ97352.1| hypothetical protein TcasGA2_TC011169 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|189241575|ref|XP_001810717.1| PREDICTED: similar to AGAP000973-PA [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 290 | ||||||
| UNIPROTKB|F1NN67 | 779 | ASAH2 "Uncharacterized protein | 0.365 | 0.136 | 0.482 | 3.3e-63 | |
| UNIPROTKB|P0C7U2 | 622 | ASAH2C "Putative neutral ceram | 0.310 | 0.144 | 0.5 | 1.4e-60 | |
| UNIPROTKB|Q9NR71 | 780 | ASAH2 "Neutral ceramidase" [Ho | 0.310 | 0.115 | 0.5 | 2.5e-60 | |
| DICTYBASE|DDB_G0293538 | 714 | dcd2A "neutral/alkaline nonlys | 0.310 | 0.126 | 0.466 | 4.5e-58 | |
| FB|FBgn0039774 | 704 | CDase "Ceramidase" [Drosophila | 0.489 | 0.201 | 0.448 | 2.8e-57 | |
| TAIR|locus:2025042 | 779 | AT1G07380 [Arabidopsis thalian | 0.358 | 0.133 | 0.485 | 4.1e-57 | |
| ZFIN|ZDB-GENE-041112-1 | 743 | asah2 "N-acylsphingosine amido | 0.555 | 0.216 | 0.398 | 1.7e-55 | |
| MGI|MGI:1859310 | 756 | Asah2 "N-acylsphingosine amido | 0.5 | 0.191 | 0.386 | 2.8e-41 | |
| UNIPROTKB|E1BJU5 | 756 | ASAH2 "Uncharacterized protein | 0.465 | 0.178 | 0.401 | 1.8e-40 | |
| RGD|69410 | 761 | Asah2 "N-acylsphingosine amido | 0.5 | 0.190 | 0.413 | 1.6e-41 |
| UNIPROTKB|F1NN67 ASAH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 270 (100.1 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 54/112 (48%), Positives = 74/112 (66%)
Query: 32 VFVSVDSGMIGYNIRA------ESISRAHNNLQKGRLFVSKGELLDANINRSPTAYLQNP 85
+F G+I N+ A +SI AH N+++GRLF+++G + ++ INRSP +YLQNP
Sbjct: 209 LFWITSKGLIKPNLNAIVNGIVKSIDIAHQNMKRGRLFLNRGTVENSQINRSPYSYLQNP 268
Query: 86 EEERMRYEHDVDKGMVQLQFISAEDRPLGVINWFAVHPTSMNNTNRLVSSDN 137
ER RY + DK MV L+ + LG+I+WFAVHP SMNNTN LV+SDN
Sbjct: 269 ASERSRYSTNTDKEMVMLKMVDENGHDLGLISWFAVHPVSMNNTNHLVNSDN 320
|
|
| UNIPROTKB|P0C7U2 ASAH2C "Putative neutral ceramidase C" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9NR71 ASAH2 "Neutral ceramidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0293538 dcd2A "neutral/alkaline nonlysosomal ceramidase family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0039774 CDase "Ceramidase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025042 AT1G07380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-041112-1 asah2 "N-acylsphingosine amidohydrolase 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1859310 Asah2 "N-acylsphingosine amidohydrolase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BJU5 ASAH2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|69410 Asah2 "N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 290 | |||
| pfam04734 | 672 | pfam04734, Ceramidase_alk, Neutral/alkaline non-ly | 4e-84 | |
| PTZ00487 | 715 | PTZ00487, PTZ00487, ceramidase; Provisional | 1e-55 | |
| pfam04734 | 672 | pfam04734, Ceramidase_alk, Neutral/alkaline non-ly | 6e-33 | |
| PTZ00487 | 715 | PTZ00487, PTZ00487, ceramidase; Provisional | 6e-18 | |
| pfam04734 | 672 | pfam04734, Ceramidase_alk, Neutral/alkaline non-ly | 9e-17 |
| >gnl|CDD|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 4e-84
Identities = 93/179 (51%), Positives = 113/179 (63%), Gaps = 19/179 (10%)
Query: 48 ESISRAHNNLQKGRLFVSKGELLDANINRSPTAYLQNPEEERMRYEHDVDKGMVQLQFIS 107
SI RAH +LQ GRL V KGELLDANINRSP+AYL NPEEER RY +VDK M L+F+
Sbjct: 129 LSIVRAHESLQPGRLSVGKGELLDANINRSPSAYLANPEEERARYPDNVDKTMTLLKFVR 188
Query: 108 AEDRPLGVINWFAVHPTSMNNTNRLVSSDN-------------------GKFVAAFASTN 148
++ +P+G INWFAVH TSMNNTN L+S DN G FVAAFA +N
Sbjct: 189 SDGKPVGAINWFAVHGTSMNNTNTLISGDNKGYAAYLFEKAVGGDLPGAGGFVAAFAQSN 248
Query: 149 LGDVSPNIKGPKCLLTGVDCDIDTSACPKQGDSCVASGPGRDMFESTRLIAERMYRKAL 207
+GDVSPN+ G C C ++S C + ++C GPG D FESTR+I R + A
Sbjct: 249 VGDVSPNVLGAWCEDGSGPCCFNSSTCGGKSEACHGRGPGDDEFESTRIIGRRQFAAAK 307
|
This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes. Length = 672 |
| >gnl|CDD|240437 PTZ00487, PTZ00487, ceramidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase | Back alignment and domain information |
|---|
| >gnl|CDD|240437 PTZ00487, PTZ00487, ceramidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 290 | |||
| PF04734 | 674 | Ceramidase_alk: Neutral/alkaline non-lysosomal cer | 100.0 | |
| PTZ00487 | 715 | ceramidase; Provisional | 100.0 | |
| KOG2232|consensus | 734 | 100.0 | ||
| PF09843 | 179 | DUF2070: Predicted membrane protein (DUF2070); Int | 94.77 | |
| COG3356 | 578 | Predicted membrane protein [Function unknown] | 94.66 |
| >PF04734 Ceramidase_alk: Neutral/alkaline non-lysosomal ceramidase; InterPro: IPR006823 This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes [, , ] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-70 Score=541.75 Aligned_cols=288 Identities=57% Similarity=0.909 Sum_probs=200.1
Q ss_pred CCCCCCCCccceeecceEEEEEEEEe--CCceEEEEEEccCcccHHHHHH------------------------------
Q psy10773 1 MGYAKMEQKGVGIHLRLFSRAFIIDD--GERRFVFVSVDSGMIGYNIRAE------------------------------ 48 (290)
Q Consensus 1 ~Gy~~~~~~~~gi~d~L~aRalvl~~--~~~~~~lvs~Dl~~~~~~~~~~------------------------------ 48 (290)
|||+.++++++|||||||||||||++ +++|++||++|++++++.++++
T Consensus 21 ~GYa~~~q~a~GihdrLyARAfVl~~~~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~g~~y~~~nViIsaTHTHSgPg 100 (674)
T PF04734_consen 21 MGYANRSQVATGIHDRLYARAFVLEDDDGGTRVVFVSLDLLMIPQEVRDEVRERLAAKYGILYDEENVIISATHTHSGPG 100 (674)
T ss_dssp ESS--SS-EEEEESS--EEEEEEEEESSS--EEEEEEESSS---HHHHHHHHHHHHHHSTTT-SGGGEEEEE--BSBEE-
T ss_pred CCCCCCCCCccceecceEEEEEEEEecCCCCEEEEEEeCccccCHHHHHHHHHHHHHhhcCCCChheEEEEeEecCCCCC
Confidence 79999999999999999999999993 5799999999999999876544
Q ss_pred -----------------------------HHHHHHhcCccEEEEEEEEEecCccccCCchhhcCCChhhhccCCCCCCCc
Q psy10773 49 -----------------------------SISRAHNNLQKGRLFVSKGELLDANINRSPTAYLQNPEEERMRYEHDVDKG 99 (290)
Q Consensus 49 -----------------------------ai~~A~~~l~pa~l~~g~~~~~~~~~NR~~~~~~~np~~~~~~~~g~~D~~ 99 (290)
||++|+++|+|++|.++++++.++++||+..+|.+||++++.+|++++||+
T Consensus 101 g~~~~~~~~~~~~gf~~~~~~~lv~gIv~aI~~A~~~L~pa~l~~g~g~~~~a~~NRs~~ay~~NP~~er~~y~g~vD~~ 180 (674)
T PF04734_consen 101 GYSHYLLYNITSGGFDPEYYDALVDGIVEAIEQAHENLQPARLGFGTGELSDANINRSPSAYLRNPAEERARYDGPVDPE 180 (674)
T ss_dssp ---SSHHHHGGGTB--HHHHHHHHHHHHHHHHHHHTT-EEEEEEEEEEE--SSEEETTHHHHTT-T--T-TT-TTS---E
T ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEEeEEEecceeecCCchhhhcCccccccccCCCcCCc
Confidence 899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCceEEEEeeeecccccCCCCceeccCC-------------------cchhhhhhccccCCCCCCCCCCc
Q psy10773 100 MVQLQFISAEDRPLGVINWFAVHPTSMNNTNRLVSSDN-------------------GKFVAAFASTNLGDVSPNIKGPK 160 (290)
Q Consensus 100 v~vl~~~~~~g~~~a~l~nya~HpT~l~~~n~~iS~D~-------------------~~~va~f~~Ga~GD~sP~~~g~~ 160 (290)
|.+|+|++.+|+++|+|+|||||||+|+++|++||+|| ++||++|+||++||+|||..|.+
T Consensus 181 ~~vLrf~~~dG~~ig~L~nfAvHpTsl~~~N~lIS~D~~G~aa~~lE~~~~~~~~~~~~fVaaFaq~n~GDvsPN~~g~~ 260 (674)
T PF04734_consen 181 MTVLRFRDADGKPIGVLNNFAVHPTSLGNTNRLISGDNKGYAAYLLEKELGGDLAGKPPFVAAFAQGNAGDVSPNTLGPF 260 (674)
T ss_dssp EEEEEEEETTS-EEEEEEE----B-SS-TT--SBB-HHHHHHHHHHHHTT------STT-EEEEE-SS-TTEES-SS---
T ss_pred eeEEEEEeCCCCEEEEEEEEcccceeccCCCCeecCCcHhHHHHHHHHhhcccccCCCCeEEEEccCCcccccccccccc
Confidence 99999999999999999999999999999999999999 57899999999999999999999
Q ss_pred cccCCCcccccCCCCCCCCCccccCCCCchhhhhhHHHHHHHHHHhh---------------------------------
Q psy10773 161 CLLTGVDCDIDTSACPKQGDSCVASGPGRDMFESTRLIAERMYRKAL--------------------------------- 207 (290)
Q Consensus 161 ~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------------------------------- 207 (290)
|+++|.+||+.+|+|+++.+.|...||+.++++++++||++|+++++
T Consensus 261 c~~~g~~c~~~~s~c~~~~~~~~~~Gp~~d~~~s~~iig~rq~~~A~~l~~~~~~~~~g~v~~~~~~vdm~~~~v~~~~~ 340 (674)
T PF04734_consen 261 CEDTGLPCDFEHSTCGGKNELCHGRGPGKDMFESTRIIGERQFDKARELYDSASEELTGPVDSRHQYVDMSNVTVDPPFT 340 (674)
T ss_dssp --------------------SSSTSSSTS-HHHHHHHHHHHHHHHHHHHHHHT-EEE-S-EEEEEEEEE-TT-EE-GGGT
T ss_pred ccccccccccccccccccccccCCCCCCccchHHHHHHHHHHHHHHHHHhhccCcccCCCEeEEEEEEcCCCeEEccCCC
Confidence 99999999999999999999999999999999999999999998877
Q ss_pred ------------------------------------------------------------------------hcCCCCCC
Q psy10773 208 ------------------------------------------------------------------------MNVPHQWQ 215 (290)
Q Consensus 208 ------------------------------------------------------------------------~~~p~~~~ 215 (290)
+..|++|.
T Consensus 341 ~~~~~~~tc~~a~G~sfaAGt~DGpg~~~f~qg~~~~~~~p~w~~v~~~~~~p~~~~~~cq~pKpiLl~~G~~~~p~~w~ 420 (674)
T PF04734_consen 341 GDGKTVRTCPAAMGYSFAAGTEDGPGAFDFTQGDTEVEGNPFWDLVRDFLKKPSPEQVACQAPKPILLPTGEMNFPYPWV 420 (674)
T ss_dssp -TSS-EE-----EE----SSSSSSS-SS---SSS------HHHHHHT-SSS---HHHHHHTTT--EEE--TT--SSS-SS
T ss_pred CCCCcCcccccccccccccccccCCCcccccCCCcccccchHHHHHhhhccCCCHHHHhccCCCcEEEeccccCCCcccC
Confidence 33568999
Q ss_pred CceeEEEEEEECCEEEEeeCCccchHHHHHHHHHHHHHhccC--CCCcEEEEcccCCCCcccCCHHhhccCcccc
Q psy10773 216 PNTVSTQLVRIGHLVLVGVPGELTTMAGRRLRRALQDELGLL--MESDVIIAGLANTYADYVTTPEEYQEIVHMS 288 (290)
Q Consensus 216 ~~~~~v~~l~iG~~~lv~~PgE~~~~~G~~lk~~~~~~s~~~--~~~~~~i~gyaNg~~GYi~t~~~y~~~~YE~ 288 (290)
|..+++|++|||++.|+++|||+++|.|+|||++|++.+... .++.++|+||+|+|.|||+|+|||+.|+||.
T Consensus 421 p~i~~~Qi~riG~l~i~~~P~E~TtmaGrRlr~~v~~~~~~~~~~~~~vvi~g~sN~Y~~YvtT~EEY~~Q~YEg 495 (674)
T PF04734_consen 421 PNIVPIQIVRIGQLVIVAVPGEFTTMAGRRLREAVAEALGAAGIDDPHVVIAGLSNGYSHYVTTPEEYQVQRYEG 495 (674)
T ss_dssp -SEEEEEEEEETTEEEEE-SSEE-HHHHHHHHHHHHHHHGGGT----EEEEE-SBSS---EE--HHHHHH--HHH
T ss_pred CceEEEEEEEEcCEEEEEcCCcchhHHHHHHHHHHHHHHhhcCCCceEEEEEeeccCcccccCCHHHhhcCcccc
Confidence 999999999999999999999999999999999999886322 1468999999999999999999999999996
|
They hydrolyse the sphingolipid ceramide into sphingosine and free fatty acid.; PDB: 2ZXC_A 2ZWS_A. |
| >PTZ00487 ceramidase; Provisional | Back alignment and domain information |
|---|
| >KOG2232|consensus | Back alignment and domain information |
|---|
| >PF09843 DUF2070: Predicted membrane protein (DUF2070); InterPro: IPR019204 This domain of unknown function is found in various bacterial and archael hypothetical proteins, as well as in prokaryotic polyketide synthase | Back alignment and domain information |
|---|
| >COG3356 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 290 | ||||
| 2zxc_A | 646 | Seramidase Complexed With C2 Length = 646 | 2e-20 | ||
| 2zxc_A | 646 | Seramidase Complexed With C2 Length = 646 | 1e-12 |
| >pdb|2ZXC|A Chain A, Seramidase Complexed With C2 Length = 646 | Back alignment and structure |
|
| >pdb|2ZXC|A Chain A, Seramidase Complexed With C2 Length = 646 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 290 | |||
| 2zws_A | 646 | Neutral ceramidase; prism fold and beta-sandwich f | 1e-33 | |
| 2zws_A | 646 | Neutral ceramidase; prism fold and beta-sandwich f | 1e-18 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Length = 646 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 1e-33
Identities = 69/220 (31%), Positives = 95/220 (43%), Gaps = 43/220 (19%)
Query: 47 AESISRAHNNLQKGRLFVSKGELLDANINRSPTAYLQNPEEERMRYEHDVDKGMVQLQFI 106
SI RA LQ GRLF GEL +A+ NRS ++L+NP+ YE +D M L F+
Sbjct: 131 VRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNPD--IAGYEDGIDPQMSVLSFV 188
Query: 107 SAEDRPLGVINWFAVHPTSMNNTNRLVSSDN---------------GKFVAAFASTNLGD 151
A G I+WF VH TSM N N L+S DN FVAAFA TN G+
Sbjct: 189 DANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGN 248
Query: 152 VSPNIKGPKCLLTGVDCDIDTSACPKQGDSCVASGPGRDMFESTRLIAERMYRKA--LMN 209
+SPN+ SGP + F++TR I R + KA +
Sbjct: 249 LSPNLNL-----------------------KPGSGPFDNEFDNTREIGLRQFAKAYEIAG 285
Query: 210 VPHQWQPNTVSTQLVRIGHLVLVGVPGELTTMAGRRLRRA 249
+ + ++ + + + E T R+L A
Sbjct: 286 QAQEEVLGELDSRFRFV-DFTRLPIRPEFTDGQPRQLCTA 324
|
| >2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Length = 646 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 290 | |||
| 2zws_A | 646 | Neutral ceramidase; prism fold and beta-sandwich f | 100.0 |
| >2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-60 Score=473.40 Aligned_cols=286 Identities=42% Similarity=0.669 Sum_probs=222.9
Q ss_pred CCCCCCCCccceeecceEEEEEEEEeC--CceEEEEEEccCcccHHHHHH------------------------------
Q psy10773 1 MGYAKMEQKGVGIHLRLFSRAFIIDDG--ERRFVFVSVDSGMIGYNIRAE------------------------------ 48 (290)
Q Consensus 1 ~Gy~~~~~~~~gi~d~L~aRalvl~~~--~~~~~lvs~Dl~~~~~~~~~~------------------------------ 48 (290)
|||+.+.++++|||||||||||||+++ ++|++||++|++++++.++++
T Consensus 24 ~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP~ 103 (646)
T 2zws_A 24 MGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGPG 103 (646)
T ss_dssp ESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEEC
T ss_pred cCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCCc
Confidence 699999999999999999999999985 799999999999999976655
Q ss_pred -----------------------------HHHHHHhcCccEEEEEEEEEecCccccCCchhhcCCChhhhccCCCCCCCc
Q psy10773 49 -----------------------------SISRAHNNLQKGRLFVSKGELLDANINRSPTAYLQNPEEERMRYEHDVDKG 99 (290)
Q Consensus 49 -----------------------------ai~~A~~~l~pa~l~~g~~~~~~~~~NR~~~~~~~np~~~~~~~~g~~D~~ 99 (290)
||++|+++|+|++|+|+++++.++++|||+.+|.+|| ++++|++++||+
T Consensus 104 g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~~ 181 (646)
T 2zws_A 104 GFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDPQ 181 (646)
T ss_dssp CCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCCE
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCCc
Confidence 9999999999999999999999999999999999999 788899999999
Q ss_pred eEEEEEEeCCCCceEEEEeeeecccccCCCCceeccCC---------------cchhhhhhccccCCCCCCCC-----CC
Q psy10773 100 MVQLQFISAEDRPLGVINWFAVHPTSMNNTNRLVSSDN---------------GKFVAAFASTNLGDVSPNIK-----GP 159 (290)
Q Consensus 100 v~vl~~~~~~g~~~a~l~nya~HpT~l~~~n~~iS~D~---------------~~~va~f~~Ga~GD~sP~~~-----g~ 159 (290)
|.+|+|++.+|+++|+|+|||||||+|+++|++||+|| ++||++|+|||+||+||++. |+
T Consensus 182 ~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~~~~fva~F~qg~~GDvsP~~~~~~~~Gp 261 (646)
T 2zws_A 182 MSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPNLNLKPGSGP 261 (646)
T ss_dssp EEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCCSTTCEEEEECSSCTTEEECCCCCTTCCT
T ss_pred eEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCCCCCeEEEEeccCcccCCccccccccCCC
Confidence 99999998899999999999999999999999999999 34899999999999999985 21
Q ss_pred cccc------CCC---------------c----ccccCC--CCCC-----------CCCcccc------------CCCCc
Q psy10773 160 KCLL------TGV---------------D----CDIDTS--ACPK-----------QGDSCVA------------SGPGR 189 (290)
Q Consensus 160 ~~~~------~g~---------------~----~~~~~~--~~~~-----------~~~~~~~------------~~p~~ 189 (290)
...+ .|+ . ++.... ..+. ....|.. .+|..
T Consensus 262 ~~~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~g~~~~tc~~a~g~s~aag~~~dgpg~ 341 (646)
T 2zws_A 262 FDNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGP 341 (646)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGSSSSCEECCCCCEEC-------------
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccCCcccceechhhhchhhhcCCcccCCCc
Confidence 1110 110 0 000000 0000 0001110 11211
Q ss_pred hhhhhh-----HHH--------HHHHHHHhh----------hcCCCCCCCceeEEEEEEECCEEEEeeCCccchHHHHHH
Q psy10773 190 DMFEST-----RLI--------AERMYRKAL----------MNVPHQWQPNTVSTQLVRIGHLVLVGVPGELTTMAGRRL 246 (290)
Q Consensus 190 ~~~~~~-----~~~--------~~~~~~~~~----------~~~p~~~~~~~~~v~~l~iG~~~lv~~PgE~~~~~G~~l 246 (290)
..++.. ..+ ... ..+.+ ..+|++|.+..+++|+|||||++|+++|||+|+++|++|
T Consensus 342 ~~f~q~~~~~w~~~~~~l~~~~~~~-~~~cq~~k~ill~~g~~~p~~~~~~~v~vqilriGdl~iv~~PgE~tt~~G~rl 420 (646)
T 2zws_A 342 LGLEEGNNPFLSALGGLLTGVPPQE-LVQCQAEKTILADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRI 420 (646)
T ss_dssp --CCSSCCHHHHHTTCSCCCCCCHH-HHHHTTTCCEEECCTTCSSSCSSCSEEEEEEEEETTEEEEECSSEECHHHHHHH
T ss_pred cccccccchhhhhhhhhhccccchh-HHhhccCcceecccCCCCCcccccceEEEEEEEECCEEEEecCcHHHHHHHHHH
Confidence 011100 000 011 11111 134578999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEcccCCCCcccCCHHhhccCccccC
Q psy10773 247 RRALQDELGLLMESDVIIAGLANTYADYVTTPEEYQEIVHMSN 289 (290)
Q Consensus 247 k~~~~~~s~~~~~~~~~i~gyaNg~~GYi~t~~~y~~~~YE~~ 289 (290)
|+++++.++..+.+.++|+||||+|.|||||+|||+.|+||+.
T Consensus 421 r~~~~~~~~~~~~~~v~v~GyaN~y~gYi~T~EeY~~q~YEg~ 463 (646)
T 2zws_A 421 RRAVQAASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGG 463 (646)
T ss_dssp HHHHHHHHGGGTCCEEEEECSBSSCCCEECCHHHHHHCCTTTT
T ss_pred HHHHHhhhccCCCceEEEEecCCCCCCccCCHHHHhcCCccce
Confidence 9988776532134578888999999999999999999999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00