Psyllid ID: psy10926

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSRPSGT
ccccEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHcccccEEEEEcccHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccHHHHHccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccHHHHHHHHHHHHcHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
ccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEccccHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEccccHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccc
mstpigatavypiDLVKtrmqnqrtgsfIGELMYRnswdcfkkagfsqvmftnPLEIVKIRLQVAGevvaapatkISAWSIVKELGFMGLYKGARacmlrdvpfsaiyfpaynhtkkrfadengynhpltLLAAGCIagipaaslvtpadVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVArmfrsspqfGVTLVMYELFQRLFyidfggsrpsgt
mstpigatavypidlvktrmqNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVvarqgqtvysGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFyidfggsrpsgt
MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSRPSGT
******ATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFG*******
MSTPIGATAVYPIDLVKTRMQN**********MYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQV***********ISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFAD**GYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVV*****TVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRL*************
MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSRPSGT
MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDF********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSRPSGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query227 2.2.26 [Sep-21-2011]
Q9VA73695 Calcium-binding mitochond yes N/A 0.973 0.317 0.596 8e-88
Q8BH59677 Calcium-binding mitochond yes N/A 0.973 0.326 0.580 6e-82
Q21153707 Probable calcium-binding yes N/A 0.973 0.312 0.562 3e-80
Q9UJS0675 Calcium-binding mitochond yes N/A 0.973 0.327 0.551 2e-78
Q9QXX4676 Calcium-binding mitochond no N/A 0.973 0.326 0.544 7e-78
O75746678 Calcium-binding mitochond no N/A 0.973 0.325 0.548 1e-77
Q5RBC8678 Calcium-binding mitochond yes N/A 0.973 0.325 0.548 1e-77
Q8HXW2674 Calcium-binding mitochond N/A N/A 0.969 0.326 0.544 1e-76
Q54RB9772 Calcium-binding mitochond yes N/A 0.938 0.275 0.471 6e-58
Q75AH6911 Mitochondrial aspartate-g yes N/A 0.801 0.199 0.520 6e-50
>sp|Q9VA73|CMC_DROME Calcium-binding mitochondrial carrier protein Aralar1 OS=Drosophila melanogaster GN=aralar1 PE=2 SV=1 Back     alignment and function desciption
 Score =  323 bits (827), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 188/280 (67%), Gaps = 59/280 (21%)

Query: 5   IGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKA----GF--------SQVMFT 52
           +GAT VYPIDLVKTRMQNQR GS+IGE+ YRNSWDCFKK     GF         Q+M  
Sbjct: 355 VGATVVYPIDLVKTRMQNQRAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMGV 414

Query: 53  NPLEIVK---------------------------------------------IRLQVAGE 67
            P + +K                                             IRLQVAGE
Sbjct: 415 APEKAIKLTVNDLVRDKLTDKKGNIPTWAEVLAGGCAGASQVVFTNPLEIVKIRLQVAGE 474

Query: 68  VVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNH 127
           +  A  +KI AWS+V+ELG  GLYKGARAC+LRDVPFSAIYFP Y HTK   AD++GYNH
Sbjct: 475 I--ASGSKIRAWSVVRELGLFGLYKGARACLLRDVPFSAIYFPTYAHTKAMMADKDGYNH 532

Query: 128 PLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARAFW 187
           PLTLLAAG IAG+PAASLVTPADVIKTRLQVVAR GQT Y+GV D  +KI  EEG RAFW
Sbjct: 533 PLTLLAAGAIAGVPAASLVTPADVIKTRLQVVARSGQTTYTGVWDATKKIMAEEGPRAFW 592

Query: 188 KGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSRPSGT 227
           KGT AR+FRSSPQFGVTLV YEL QRLFY+DFGG++P G+
Sbjct: 593 KGTAARVFRSSPQFGVTLVTYELLQRLFYVDFGGTQPKGS 632
Calcium-dependent mitochondrial solute carrier.
Drosophila melanogaster (taxid: 7227)
>sp|Q8BH59|CMC1_MOUSE Calcium-binding mitochondrial carrier protein Aralar1 OS=Mus musculus GN=Slc25a12 PE=1 SV=1 Back     alignment and function description
>sp|Q21153|CMC1_CAEEL Probable calcium-binding mitochondrial carrier K02F3.2 OS=Caenorhabditis elegans GN=K02F3.2 PE=3 SV=2 Back     alignment and function description
>sp|Q9UJS0|CMC2_HUMAN Calcium-binding mitochondrial carrier protein Aralar2 OS=Homo sapiens GN=SLC25A13 PE=1 SV=2 Back     alignment and function description
>sp|Q9QXX4|CMC2_MOUSE Calcium-binding mitochondrial carrier protein Aralar2 OS=Mus musculus GN=Slc25a13 PE=1 SV=1 Back     alignment and function description
>sp|O75746|CMC1_HUMAN Calcium-binding mitochondrial carrier protein Aralar1 OS=Homo sapiens GN=SLC25A12 PE=1 SV=2 Back     alignment and function description
>sp|Q5RBC8|CMC1_PONAB Calcium-binding mitochondrial carrier protein Aralar1 OS=Pongo abelii GN=SLC25A12 PE=2 SV=1 Back     alignment and function description
>sp|Q8HXW2|CMC2_MACFA Calcium-binding mitochondrial carrier protein Aralar2 OS=Macaca fascicularis GN=SLC25A13 PE=2 SV=1 Back     alignment and function description
>sp|Q54RB9|CMC_DICDI Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1 Back     alignment and function description
>sp|Q75AH6|AGC1_ASHGO Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AGC1 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query227
326910931 687 calcium-binding mitochondrial carrier pr 1.0 0.330 0.606 1e-89
345481607 682 PREDICTED: calcium-binding mitochondrial 0.973 0.324 0.617 3e-89
345481609 673 PREDICTED: calcium-binding mitochondrial 0.973 0.328 0.617 4e-89
307192016 671 Calcium-binding mitochondrial carrier pr 0.973 0.329 0.607 2e-87
332026081 665 Calcium-binding mitochondrial carrier pr 0.973 0.332 0.6 3e-87
383851350 734 PREDICTED: calcium-binding mitochondrial 0.973 0.301 0.596 3e-87
322799198 638 hypothetical protein SINV_00737 [Solenop 0.973 0.346 0.6 6e-87
194905455 682 GG11935 [Drosophila erecta] gi|190655837 0.973 0.324 0.6 9e-87
195341530 682 GM12154 [Drosophila sechellia] gi|194131 0.973 0.324 0.596 2e-86
45552009 679 aralar1, isoform B [Drosophila melanogas 0.973 0.325 0.596 2e-86
>gi|326910931|ref|NP_001192092.1| calcium-binding mitochondrial carrier protein Aralar1 [Acyrthosiphon pisum] gi|328704759|ref|XP_003242593.1| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1 isoform 1 [Acyrthosiphon pisum] gi|328704761|ref|XP_003242594.1| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1 isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 171/282 (60%), Positives = 196/282 (69%), Gaps = 55/282 (19%)

Query: 1   MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKKAGFSQVMF--------- 51
           +S  IGATAVYPIDLVKTRMQNQR GSFIGELMYRNS+DCFKK    + +F         
Sbjct: 357 ISGAIGATAVYPIDLVKTRMQNQRAGSFIGELMYRNSFDCFKKVIRHEGIFGLYRGLLPQ 416

Query: 52  -------------TNPLEIVKIR-----LQVAGEVVA----------------------- 70
                         N L   K+R     L V+ E++A                       
Sbjct: 417 LIGVAPEKAAKLTVNDLVRDKLRQENGDLAVSSEIIAGACAGFSQVIFTNPLEIVKIRLQ 476

Query: 71  -----APATKISAWSIVKELGFMGLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGY 125
                A   K+SA +++KELGF GLYKGA+AC LRD+PFSAIYFPAYNH K+ FADE GY
Sbjct: 477 VAGEIASTKKLSAITVIKELGFFGLYKGAKACFLRDIPFSAIYFPAYNHVKQAFADEKGY 536

Query: 126 NHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARA 185
           NHPL+LLAAGCIAG+PAASLVTPADVIKTRLQVVAR+GQT Y+G+VDCA KIY EEG RA
Sbjct: 537 NHPLSLLAAGCIAGVPAASLVTPADVIKTRLQVVARKGQTTYNGLVDCAMKIYNEEGPRA 596

Query: 186 FWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSRPSGT 227
           FWKGT AR+FRSSPQFGVTL+ YE+ QRLFY+DFGGSRPSG+
Sbjct: 597 FWKGTGARVFRSSPQFGVTLLSYEILQRLFYVDFGGSRPSGS 638

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345481607|ref|XP_003424412.1| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345481609|ref|XP_001605622.2| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307192016|gb|EFN75400.1| Calcium-binding mitochondrial carrier protein Aralar1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332026081|gb|EGI66230.1| Calcium-binding mitochondrial carrier protein Aralar1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|383851350|ref|XP_003701196.1| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|322799198|gb|EFZ20626.1| hypothetical protein SINV_00737 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|194905455|ref|XP_001981199.1| GG11935 [Drosophila erecta] gi|190655837|gb|EDV53069.1| GG11935 [Drosophila erecta] Back     alignment and taxonomy information
>gi|195341530|ref|XP_002037359.1| GM12154 [Drosophila sechellia] gi|194131475|gb|EDW53518.1| GM12154 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|45552009|ref|NP_733366.2| aralar1, isoform B [Drosophila melanogaster] gi|45446719|gb|AAF57050.3| aralar1, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query227
FB|FBgn0028646695 aralar1 "aralar1" [Drosophila 0.801 0.261 0.771 6.2e-91
UNIPROTKB|A6QNM9675 SLC25A12 "Uncharacterized prot 0.801 0.269 0.711 1.2e-83
UNIPROTKB|E2RBI2678 SLC25A12 "Uncharacterized prot 0.801 0.268 0.711 1.2e-83
UNIPROTKB|F1S086413 SLC25A12 "Uncharacterized prot 0.801 0.440 0.717 1.9e-83
UNIPROTKB|I3L8T2423 SLC25A12 "Uncharacterized prot 0.801 0.430 0.717 1.9e-83
UNIPROTKB|O75746678 SLC25A12 "Calcium-binding mito 0.801 0.268 0.711 4e-83
UNIPROTKB|Q5RBC8678 SLC25A12 "Calcium-binding mito 0.801 0.268 0.711 4e-83
UNIPROTKB|B3KR64571 SLC25A12 "cDNA FLJ33752 fis, c 0.801 0.318 0.711 4e-83
UNIPROTKB|F1P3D8635 SLC25A12 "Uncharacterized prot 0.801 0.286 0.713 4e-83
UNIPROTKB|F5GX33567 SLC25A13 "Calcium-binding mito 0.801 0.320 0.701 4e-83
FB|FBgn0028646 aralar1 "aralar1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 739 (265.2 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
 Identities = 142/184 (77%), Positives = 158/184 (85%)

Query:    44 AGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVP 103
             AG SQV+FTNPLEIVKIRLQVAGE+  A  +KI AWS+V+ELG  GLYKGARAC+LRDVP
Sbjct:   451 AGASQVVFTNPLEIVKIRLQVAGEI--ASGSKIRAWSVVRELGLFGLYKGARACLLRDVP 508

Query:   104 FSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQG 163
             FSAIYFP Y HTK   AD++GYNHPLTLLAAG IAG+PAASLVTPADVIKTRLQVVAR G
Sbjct:   509 FSAIYFPTYAHTKAMMADKDGYNHPLTLLAAGAIAGVPAASLVTPADVIKTRLQVVARSG 568

Query:   164 QTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDFGGSR 223
             QT Y+GV D  +KI  EEG RAFWKGT AR+FRSSPQFGVTLV YEL QRLFY+DFGG++
Sbjct:   569 QTTYTGVWDATKKIMAEEGPRAFWKGTAARVFRSSPQFGVTLVTYELLQRLFYVDFGGTQ 628

Query:   224 PSGT 227
             P G+
Sbjct:   629 PKGS 632
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=NAS
GO:0005509 "calcium ion binding" evidence=ISS;NAS
GO:0005743 "mitochondrial inner membrane" evidence=ISS;NAS
GO:0006810 "transport" evidence=NAS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
GO:0042060 "wound healing" evidence=IMP
UNIPROTKB|A6QNM9 SLC25A12 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RBI2 SLC25A12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S086 SLC25A12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3L8T2 SLC25A12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O75746 SLC25A12 "Calcium-binding mitochondrial carrier protein Aralar1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5RBC8 SLC25A12 "Calcium-binding mitochondrial carrier protein Aralar1" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|B3KR64 SLC25A12 "cDNA FLJ33752 fis, clone BRCAN2000364, highly similar to Calcium-binding mitochondrial carrier protein Aralar1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P3D8 SLC25A12 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F5GX33 SLC25A13 "Calcium-binding mitochondrial carrier protein Aralar2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VA73CMC_DROMENo assigned EC number0.59640.97350.3179yesN/A
Q75AH6AGC1_ASHGONo assigned EC number0.52060.80170.1997yesN/A
Q5RBC8CMC1_PONABNo assigned EC number0.54800.97350.3259yesN/A
Q9UJS0CMC2_HUMANNo assigned EC number0.55160.97350.3274yesN/A
Q8BH59CMC1_MOUSENo assigned EC number0.58000.97350.3264yesN/A
Q12482AGC1_YEASTNo assigned EC number0.55050.74440.1873yesN/A
Q21153CMC1_CAEELNo assigned EC number0.56270.97350.3125yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-30
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-08
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-08
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-06
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score =  106 bits (268), Expect = 5e-30
 Identities = 37/94 (39%), Positives = 51/94 (54%)

Query: 126 NHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCARKIYQEEGARA 185
              L  L AG IAG  AA++  P DV+KTRLQ  A  G   Y G++DC +KIY+EEG R 
Sbjct: 3   LSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRG 62

Query: 186 FWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDF 219
            +KG +  + R +P   +    YE  ++L     
Sbjct: 63  LYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96

Length = 96
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 227
KOG0752|consensus320 100.0
KOG0751|consensus694 100.0
KOG0753|consensus317 100.0
KOG0764|consensus299 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758|consensus297 100.0
KOG0754|consensus294 100.0
KOG0762|consensus311 100.0
KOG0760|consensus302 100.0
KOG0759|consensus286 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0768|consensus323 100.0
KOG0757|consensus319 100.0
KOG0761|consensus361 100.0
KOG0764|consensus299 100.0
KOG0749|consensus298 100.0
KOG0750|consensus304 100.0
KOG0756|consensus299 100.0
KOG0036|consensus463 100.0
KOG0755|consensus320 100.0
KOG0752|consensus320 100.0
KOG0757|consensus319 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0763|consensus301 100.0
KOG0765|consensus333 100.0
KOG0760|consensus302 100.0
KOG0758|consensus297 100.0
KOG0753|consensus317 100.0
KOG0766|consensus297 99.98
KOG0754|consensus294 99.98
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0761|consensus 361 99.97
KOG0762|consensus 311 99.97
KOG0759|consensus286 99.97
KOG0770|consensus353 99.97
KOG0751|consensus 694 99.97
KOG0770|consensus 353 99.97
KOG0769|consensus308 99.96
KOG0767|consensus333 99.96
KOG0767|consensus 333 99.95
KOG0036|consensus463 99.95
KOG0765|consensus333 99.94
KOG0768|consensus323 99.94
KOG0769|consensus 308 99.93
KOG0766|consensus297 99.93
KOG0756|consensus299 99.93
KOG0750|consensus304 99.92
KOG0749|consensus298 99.92
KOG0755|consensus320 99.91
KOG0763|consensus301 99.91
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.81
KOG2745|consensus321 99.74
KOG1519|consensus297 99.67
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.55
KOG2954|consensus427 99.34
KOG1519|consensus297 99.27
KOG2745|consensus321 99.23
KOG2954|consensus427 98.27
>KOG0752|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.2e-46  Score=302.97  Aligned_cols=216  Identities=26%  Similarity=0.469  Sum_probs=189.7

Q ss_pred             CCcccccccccchhhhhhhhccccCCCcccccceehHHHHHHH-------------------------------------
Q psy10926          1 MSTPIGATAVYPIDLVKTRMQNQRTGSFIGELMYRNSWDCFKK-------------------------------------   43 (227)
Q Consensus         1 ~a~~~~~~~~~Pld~ik~~~Q~~~~~~~~~~~~~~~~~~~~~~-------------------------------------   43 (227)
                      +||+++.+++.|||+||+|+|++..+  .....|.|+.++++.                                     
T Consensus        36 vAGavsrt~~APLd~iKIlfQ~~~~~--~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~  113 (320)
T KOG0752|consen   36 VAGAVSRTVTAPLDRIKILFQVQVEP--SKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKK  113 (320)
T ss_pred             HHHHHHHHhcCchhHceEEEEecccc--ccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhh
Confidence            57899999999999999999999854  222344554444443                                     


Q ss_pred             ----------------------hccchhhccCcHHHHHHHHHhcCCCCCCCchhHHHHHHHHhhchhhccccchhhhhcc
Q psy10926         44 ----------------------AGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRD  101 (227)
Q Consensus        44 ----------------------a~~~~~~i~~Pl~~ik~~~q~~~~~~~~~~~~~~~~~~~~~~G~~~ly~G~~~~~~~~  101 (227)
                                            ||+++.+++||||++|+|+-++.+...+++..+.+++++++||++|||||+.|++++.
T Consensus       114 ~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi  193 (320)
T KOG0752|consen  114 LVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGI  193 (320)
T ss_pred             hhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhcCcchhhhee
Confidence                                  9999999999999999999999887679999999999999999999999999999999


Q ss_pred             cccceeecchHHHHHH-HhhccC--CCCChhHHHHHHHhhhhhhhhccccHHHHHHhhhccccC---CCcccccHHHHHH
Q psy10926        102 VPFSAIYFPAYNHTKK-RFADEN--GYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQ---GQTVYSGVVDCAR  175 (227)
Q Consensus       102 ~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~g~~ag~~~~~i~~P~d~ik~~~q~~~~~---~~~~~~~~~~~~~  175 (227)
                      +|+.+++|.+||.+|+ ...+..  .+.+.+..+++|++||++++.+++|||++|.|||..+..   ....+.+.+++++
T Consensus       194 ~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~  273 (320)
T KOG0752|consen  194 APYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFR  273 (320)
T ss_pred             hhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHH
Confidence            9999999999999999 444333  345778899999999999999999999999999998752   3345579999999


Q ss_pred             HHHHhhccchhccccccccccccccchhHHHHHHHHHHHHhhh
Q psy10926        176 KIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYID  218 (227)
Q Consensus       176 ~i~~~~G~~glyrG~~~~~~~~~~~~~i~~~~y~~~~~~~~~~  218 (227)
                      +|+++||+.|||||+.|++++.+|..++.|.+||.+|+++...
T Consensus       274 ~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~  316 (320)
T KOG0752|consen  274 QIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLL  316 (320)
T ss_pred             HHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhcc
Confidence            9999999999999999999999999999999999999887643

>KOG0751|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-14
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-10
1okc_A 297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-05
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 49  VMFTNPLEIVKIRLQV---AGEVVAAPATKISAWSIVKELGFMGLYKGARACMLRDVPFS 105
           V    P ++VK+R Q    AG      +T  +  +I +E G  GL+KG    + R+   +
Sbjct: 119 VAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVN 178
Query: 106 AIYFPAYNHTKKRFADENGYNHPLTL-LAAGCIAGIPAASLVTPADVIKTRLQVVARQGQ 164
                 Y+  K      N     L     +   AG     + +P DV+KTR    A  GQ
Sbjct: 179 CAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-LGQ 237
Query: 165 TVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQR 213
             Y     CA  + ++EG RAF+KG +    R      V  V YE  +R
Sbjct: 238 --YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR 284
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-51
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-35
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-16
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-13
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-44
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-41
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-15
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-11
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  166 bits (423), Expect = 4e-51
 Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 8/177 (4%)

Query: 44  AGFSQVMFTNPLEIVKIRLQVAGEVVAAPAT----KISAWSIVKELGFMGLYKGARACML 99
           AG + + F  PL+  + RL       AA             I K  G  GLY+G    + 
Sbjct: 122 AGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQ 181

Query: 100 RDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVV 159
             + + A YF  Y+  K    D    +  +            A  +  P D ++ R+ + 
Sbjct: 182 GIIIYRAAYFGVYDTAKGMLPDPKNVH-IIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ 240

Query: 160 ARQ--GQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRL 214
           + +     +Y+G VDC RKI ++EG +AF+KG  + + R        LV+Y+  ++ 
Sbjct: 241 SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKF 296
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query227
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=8.3e-46  Score=304.40  Aligned_cols=216  Identities=25%  Similarity=0.355  Sum_probs=184.8

Q ss_pred             CCcccccccccchhhhhhhhccccCCCc----ccccceehHHHHHHH---------------------------------
Q psy10926          1 MSTPIGATAVYPIDLVKTRMQNQRTGSF----IGELMYRNSWDCFKK---------------------------------   43 (227)
Q Consensus         1 ~a~~~~~~~~~Pld~ik~~~Q~~~~~~~----~~~~~~~~~~~~~~~---------------------------------   43 (227)
                      +||+++.+++||||+||||+|++.....    .....|++.+++++.                                 
T Consensus        10 ~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye   89 (303)
T 2lck_A           10 TAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYD   89 (303)
T ss_dssp             HHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHH
T ss_pred             HHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence            3678899999999999999999864311    011223443333322                                 


Q ss_pred             ------------------------hccchhhccCcHHHHHHHHHhcCC---CCCCCchhHHHHHHHHhhchhhccccchh
Q psy10926         44 ------------------------AGFSQVMFTNPLEIVKIRLQVAGE---VVAAPATKISAWSIVKELGFMGLYKGARA   96 (227)
Q Consensus        44 ------------------------a~~~~~~i~~Pl~~ik~~~q~~~~---~~~~~~~~~~~~~~~~~~G~~~ly~G~~~   96 (227)
                                              ||+++.++++|+|++|+|+|++..   ...+.+.++++++++++||+++||||+.+
T Consensus        90 ~~k~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~  169 (303)
T 2lck_A           90 SVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSP  169 (303)
T ss_dssp             HHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHhcCCcCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccH
Confidence                                    777888999999999999999864   23478999999999999999999999999


Q ss_pred             hhhcccccceeecchHHHHHHHhhccC-CCCChhHHHHHHHhhhhhhhhccccHHHHHHhhhccccCCCcccccHHHHHH
Q psy10926         97 CMLRDVPFSAIYFPAYNHTKKRFADEN-GYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQGQTVYSGVVDCAR  175 (227)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~ag~~~~~i~~P~d~ik~~~q~~~~~~~~~~~~~~~~~~  175 (227)
                      ++++.+++.+++|.+||.+++.+.+.. ...+....+++|++||++++++++|+|++|+|+|.+..   ..|.+++++++
T Consensus       170 ~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~---~~y~~~~~~~~  246 (303)
T 2lck_A          170 NVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL---GQYHSAGHCAL  246 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS---SSCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc---cccCCHHHHHH
Confidence            999999999999999999999887543 34567788999999999999999999999999999753   45899999999


Q ss_pred             HHHHhhccchhccccccccccccccchhHHHHHHHHHHHHhhhc
Q psy10926        176 KIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELFQRLFYIDF  219 (227)
Q Consensus       176 ~i~~~~G~~glyrG~~~~~~~~~~~~~i~~~~y~~~~~~~~~~~  219 (227)
                      +++++||++|||||+.|++++.+|..+++|.+||.+|+++.+..
T Consensus       247 ~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~  290 (303)
T 2lck_A          247 TMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAY  290 (303)
T ss_dssp             HHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             HHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999998876544
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 227
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-19
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-11
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-09
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 82.5 bits (202), Expect = 2e-19
 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 8/183 (4%)

Query: 33  MYRNSWDCFKKAGFSQVMFTNPLEIVKIRLQVAGEVVAAPATKISAWSIV----KELGFM 88
            +  +      AG + + F  PL+  + RL       AA        + +    K  G  
Sbjct: 110 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLR 169

Query: 89  GLYKGARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTP 148
           GLY+G    +   + + A YF  Y+  K    D    +  ++ + A  +  +       P
Sbjct: 170 GLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLV-SYP 228

Query: 149 ADVIKTRLQV--VARQGQTVYSGVVDCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLV 206
            D ++ R+ +    +    +Y+G VDC RKI ++EG +AF+KG  + + R        LV
Sbjct: 229 FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLV 287

Query: 207 MYE 209
           +Y+
Sbjct: 288 LYD 290
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query227
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=1e-41  Score=276.35  Aligned_cols=209  Identities=27%  Similarity=0.425  Sum_probs=178.0

Q ss_pred             CCcccccccccchhhhhhhhccccCCCc-ccccceehHHHHHHH------------------------------------
Q psy10926          1 MSTPIGATAVYPIDLVKTRMQNQRTGSF-IGELMYRNSWDCFKK------------------------------------   43 (227)
Q Consensus         1 ~a~~~~~~~~~Pld~ik~~~Q~~~~~~~-~~~~~~~~~~~~~~~------------------------------------   43 (227)
                      +||+++.+++||||+||||+|++..... .....|+|.+++++.                                    
T Consensus        15 ~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~   94 (292)
T d1okca_          15 VAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYK   94 (292)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHH
Confidence            3688999999999999999999875432 223445555555443                                    


Q ss_pred             --------------------------hccchhhccCcHHHHHHHHHhcCCC----CCCCchhHHHHHHHHhhchhhcccc
Q psy10926         44 --------------------------AGFSQVMFTNPLEIVKIRLQVAGEV----VAAPATKISAWSIVKELGFMGLYKG   93 (227)
Q Consensus        44 --------------------------a~~~~~~i~~Pl~~ik~~~q~~~~~----~~~~~~~~~~~~~~~~~G~~~ly~G   93 (227)
                                                |++++.++.+|+|++|+|+|.+...    ..+.+.++.+++++++||+++||+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G  174 (292)
T d1okca_          95 QIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQG  174 (292)
T ss_dssp             HHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTT
T ss_pred             HHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhcc
Confidence                                      7788999999999999999998643    2467888999999999999999999


Q ss_pred             chhhhhcccccceeecchHHHHHHHhhccCCCCChhHHHHHHHhhhhhhhhccccHHHHHHhhhccccCC--CcccccHH
Q psy10926         94 ARACMLRDVPFSAIYFPAYNHTKKRFADENGYNHPLTLLAAGCIAGIPAASLVTPADVIKTRLQVVARQG--QTVYSGVV  171 (227)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~d~ik~~~q~~~~~~--~~~~~~~~  171 (227)
                      +.+++++.+++.+++|..||.+|+.+.+.. .......++++++++.+++++++|+|++|+|+|.+....  ...|.+++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~  253 (292)
T d1okca_         175 FNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTV  253 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHH
T ss_pred             ccccccceehHhhhhhhhccchhhhccccc-ccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHH
Confidence            999999999999999999999998875543 355778899999999999999999999999999976533  34688999


Q ss_pred             HHHHHHHHhhccchhccccccccccccccchhHHHHHHHH
Q psy10926        172 DCARKIYQEEGARAFWKGTVARMFRSSPQFGVTLVMYELF  211 (227)
Q Consensus       172 ~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~i~~~~y~~~  211 (227)
                      +++++++++||++|||||+.|++++.++ +++.|.+||.+
T Consensus       254 ~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         254 DCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999999999999999999999876 58899999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure