Psyllid ID: psy10958

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKLTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR
cHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccEEccccccccccHHcHHHHHHHHHHcccccEEEEcccccHHHHHHHHcccEEEccHHHHHHHHcccccccccccHHHHHHcccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
HHHHHHHHHHHHHHHccccEEEEccHHHcccHHHHHHHHHHHHHHHHHccccHHHEEEEEEccHHHHHHHHHHHHHHcccEEccEEEEEcHHHHHHHHHHcccccccHHHcHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHccccccEEEEcHHHHHHHHHccccccccccHHHHHccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHH
MDKLVILFGTEILniipgrvstevdarlsfdkdASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVtlispyaptedpgvvSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRwelnedpmatekLSDGIRKFAVDSRNEKLTKTFSAKkanldkitldESAFRwelnedpmatekLSDGIRKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEILniipgrvstevdar
MDKLVILFGteilniipgrvstevdarlsfdkdasiaKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISpyaptedpgvvSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMlseksakkanldkiTLDESAFRWELNEDPMATEKLSDGIRKFavdsrnekltktfsakkanldkitldesafrwelnedpmateklsdgirKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEilniipgrvstevdar
MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFafaqavacaeaGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKLTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRkletllkelilkkkNIAEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR
***LVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLL*********************************FRW**************************************LDKITLDESAFRWELN*********SDGIRKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEILNIIPGR********
MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRN*****************TLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEILNIIPGRVSTEV*A*
MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKLTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEILNIIPGRVSTEVDAR
MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKLTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELILKKKNIAEQTEAAMDKLVILFGTEILNIIPGRVSTEVD*R
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MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISPYAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKLTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDxxxxxxxxxxxxxxxxxxxxxTEAAMDKLVILFGTEILNIIPGRVSTEVDAR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query321 2.2.26 [Sep-21-2011]
Q9EQS0337 Transaldolase OS=Rattus n yes N/A 0.682 0.649 0.677 1e-88
Q9W1G0331 Probable transaldolase OS yes N/A 0.710 0.688 0.654 1e-88
Q8VI73337 Transaldolase OS=Cricetul yes N/A 0.682 0.649 0.682 3e-88
P37837337 Transaldolase OS=Homo sap yes N/A 0.682 0.649 0.669 1e-87
Q93092337 Transaldolase OS=Mus musc yes N/A 0.682 0.649 0.669 2e-87
Q2TBL6337 Transaldolase OS=Bos taur yes N/A 0.682 0.649 0.665 1e-86
A8H1G4318 Transaldolase OS=Shewanel yes N/A 0.666 0.672 0.660 4e-81
B8CSD3318 Transaldolase OS=Shewanel yes N/A 0.666 0.672 0.660 1e-80
A3QBW2318 Transaldolase OS=Shewanel yes N/A 0.669 0.676 0.658 4e-80
Q15PR4317 Transaldolase OS=Pseudoal yes N/A 0.697 0.706 0.628 6e-79
>sp|Q9EQS0|TALDO_RAT Transaldolase OS=Rattus norvegicus GN=Taldo1 PE=1 SV=2 Back     alignment and function desciption
 Score =  327 bits (837), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 160/236 (67%), Positives = 186/236 (78%), Gaps = 17/236 (7%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
           +DKL +LFG EIL  IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAGI K+RILIKL
Sbjct: 84  IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRIIELYKEAGISKDRILIKL 143

Query: 61  ASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISP--------------- 105
           +STWEGIQA K LE ++GIHCN+TLLF+FAQAVACAEAGVTLISP               
Sbjct: 144 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 203

Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
             Y P EDPGV SVTKIYNYYKKFGYKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 204 KSYEPQEDPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 263

Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
              ++ +   LS K+A+ ++L+KI LDE AFRW  NED MA EKLSDGIRKFA D+
Sbjct: 264 LKDSSKLAPTLSVKAAQTSDLEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADA 319
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 2
>sp|Q9W1G0|TALDO_DROME Probable transaldolase OS=Drosophila melanogaster GN=Tal PE=2 SV=2 Back     alignment and function description
>sp|Q8VI73|TALDO_CRIGR Transaldolase OS=Cricetulus griseus GN=TALDO1 PE=2 SV=1 Back     alignment and function description
>sp|P37837|TALDO_HUMAN Transaldolase OS=Homo sapiens GN=TALDO1 PE=1 SV=2 Back     alignment and function description
>sp|Q93092|TALDO_MOUSE Transaldolase OS=Mus musculus GN=Taldo1 PE=1 SV=2 Back     alignment and function description
>sp|Q2TBL6|TALDO_BOVIN Transaldolase OS=Bos taurus GN=TALDO1 PE=2 SV=1 Back     alignment and function description
>sp|A8H1G4|TAL_SHEPA Transaldolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|B8CSD3|TAL_SHEPW Transaldolase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|A3QBW2|TAL_SHELP Transaldolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|Q15PR4|TAL_PSEA6 Transaldolase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=tal PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
156552406332 PREDICTED: transaldolase-like [Nasonia v 0.697 0.674 0.706 9e-92
157123140333 transaldolase [Aedes aegypti] gi|1088745 0.682 0.657 0.690 2e-91
94469060321 transaldolase [Aedes aegypti] 0.682 0.682 0.690 2e-91
442754585331 Putative transaldolase [Ixodes ricinus] 0.682 0.661 0.694 7e-91
346471493334 hypothetical protein [Amblyomma maculatu 0.682 0.655 0.686 2e-90
312377679392 hypothetical protein AND_10958 [Anophele 0.682 0.558 0.690 5e-90
383861974332 PREDICTED: transaldolase-like isoform 1 0.697 0.674 0.698 8e-90
170049403336 transaldolase [Culex quinquefasciatus] g 0.682 0.651 0.673 2e-89
328783160332 PREDICTED: transaldolase [Apis mellifera 0.697 0.674 0.694 3e-89
380013402332 PREDICTED: LOW QUALITY PROTEIN: transald 0.697 0.674 0.685 3e-89
>gi|156552406|ref|XP_001602166.1| PREDICTED: transaldolase-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  343 bits (879), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 171/242 (70%), Positives = 194/242 (80%), Gaps = 18/242 (7%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
           +D   +LFG EIL I+PGRVSTEVDARLSFDK+ASI KA+K I +YEEAGI KER+LIKL
Sbjct: 84  LDYTCVLFGQEILKIVPGRVSTEVDARLSFDKEASIQKARKLIAIYEEAGISKERVLIKL 143

Query: 61  ASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISP--------------- 105
           ASTWEGIQAAK LE +YGIHCNLTLLF+FAQAVACAEAGVTLISP               
Sbjct: 144 ASTWEGIQAAKELEEKYGIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYVANTDK 203

Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
             Y   EDPGV+SVTKIYNYYKKFGY TVVMGASFRN  EI ALAGCD +TI PKLLEEL
Sbjct: 204 KTYEGKEDPGVISVTKIYNYYKKFGYNTVVMGASFRNVDEIKALAGCDFLTISPKLLEEL 263

Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRN-E 222
             ST P+ ++L+ +SA+K++L KI+LDE+AFRW LNE+ MAT+KLSDGIRKFAVD R  E
Sbjct: 264 GKSTEPLAKVLTFESAQKSDLQKISLDEAAFRWHLNENQMATDKLSDGIRKFAVDMRKLE 323

Query: 223 KL 224
           KL
Sbjct: 324 KL 325

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157123140|ref|XP_001660027.1| transaldolase [Aedes aegypti] gi|108874520|gb|EAT38745.1| AAEL009389-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|94469060|gb|ABF18379.1| transaldolase [Aedes aegypti] Back     alignment and taxonomy information
>gi|442754585|gb|JAA69452.1| Putative transaldolase [Ixodes ricinus] Back     alignment and taxonomy information
>gi|346471493|gb|AEO35591.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|312377679|gb|EFR24452.1| hypothetical protein AND_10958 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|383861974|ref|XP_003706459.1| PREDICTED: transaldolase-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|170049403|ref|XP_001855895.1| transaldolase [Culex quinquefasciatus] gi|167871255|gb|EDS34638.1| transaldolase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|328783160|ref|XP_397306.3| PREDICTED: transaldolase [Apis mellifera] Back     alignment and taxonomy information
>gi|380013402|ref|XP_003690749.1| PREDICTED: LOW QUALITY PROTEIN: transaldolase-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
FB|FBgn0023477331 Tal "Tal" [Drosophila melanoga 0.370 0.359 0.691 2e-75
UNIPROTKB|P37837337 TALDO1 "Transaldolase" [Homo s 0.401 0.382 0.618 7.6e-74
CGD|CAL0001103323 TAL1 [Candida albicans (taxid: 0.585 0.582 0.588 7.7e-68
UNIPROTKB|Q5A017323 TAL1 "Transaldolase" [Candida 0.585 0.582 0.588 7.7e-68
WB|WBGene00021286319 Y24D9A.8 [Caenorhabditis elega 0.370 0.373 0.6 5.4e-67
SGD|S000004346335 TAL1 "Transaldolase" [Saccharo 0.585 0.561 0.573 1.1e-64
UNIPROTKB|H9L1C2218 TALDO1 "Transaldolase" [Gallus 0.376 0.555 0.663 4.8e-64
TIGR_CMR|SO_3546318 SO_3546 "transaldolase" [Shewa 0.710 0.716 0.566 4.2e-63
SGD|S000003275333 NQM1 "Transaldolase of unknown 0.585 0.564 0.529 4.8e-62
TIGR_CMR|CPS_4104320 CPS_4104 "transaldolase" [Colw 0.663 0.665 0.587 1.3e-61
FB|FBgn0023477 Tal "Tal" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 418 (152.2 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 83/120 (69%), Positives = 98/120 (81%)

Query:   110 EDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEELENSTTP 169
             +DPGV+SVT IYNYYKKFGYKT+VMGASFRN GEI ALAGCDL+TI P LL+ELEN T  
Sbjct:   210 KDPGVISVTNIYNYYKKFGYKTLVMGASFRNVGEIKALAGCDLLTISPALLKELENETES 269

Query:   170 VDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDS-RNEKLTKTF 228
             V   LS  +AK  +++KIT+DES FRW LNED MAT+KLS+GIRKFAVD+ + E L KT+
Sbjct:   270 VVTYLSVSNAKLQDIEKITVDESRFRWLLNEDAMATDKLSEGIRKFAVDTVKLENLIKTY 329
GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA;NAS
GO:0009052 "pentose-phosphate shunt, non-oxidative branch" evidence=NAS
GO:0005737 "cytoplasm" evidence=IEA;NAS
GO:0006098 "pentose-phosphate shunt" evidence=IEA
UNIPROTKB|P37837 TALDO1 "Transaldolase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
CGD|CAL0001103 TAL1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A017 TAL1 "Transaldolase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
WB|WBGene00021286 Y24D9A.8 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
SGD|S000004346 TAL1 "Transaldolase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|H9L1C2 TALDO1 "Transaldolase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3546 SO_3546 "transaldolase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
SGD|S000003275 NQM1 "Transaldolase of unknown function" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4104 CPS_4104 "transaldolase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8ZIN2TAL_YERPE2, ., 2, ., 1, ., 20.60880.68530.6940yesN/A
B0UV30TAL_HAES22, ., 2, ., 1, ., 20.59910.68530.6940yesN/A
A8FSH3TAL_SHESH2, ., 2, ., 1, ., 20.64950.66970.6761yesN/A
B8EFD7TAL_SHEB22, ., 2, ., 1, ., 20.59030.71020.7169yesN/A
Q9EQS0TALDO_RAT2, ., 2, ., 1, ., 20.67790.68220.6498yesN/A
Q57TP8TAL1_SALCH2, ., 2, ., 1, ., 20.61150.68530.6940yesN/A
B4RX40TAL_ALTMD2, ., 2, ., 1, ., 20.61940.70090.7053yesN/A
Q8FLD1TALB_ECOL62, ., 2, ., 1, ., 20.61150.68530.6940yesN/A
B0TJA0TAL_SHEHH2, ., 2, ., 1, ., 20.64800.66660.6729yesN/A
A0L002TAL_SHESA2, ., 2, ., 1, ., 20.60240.71020.7169yesN/A
P0A872TALB_SHIFL2, ., 2, ., 1, ., 20.60740.68530.6940yesN/A
A8H1G4TAL_SHEPA2, ., 2, ., 1, ., 20.66090.66660.6729yesN/A
A1JJD0TAL_YERE82, ., 2, ., 1, ., 20.60400.69470.7034yesN/A
Q8EBH2TAL_SHEON2, ., 2, ., 1, ., 20.59830.71020.7169yesN/A
C5B7L0TAL_EDWI92, ., 2, ., 1, ., 20.61530.66660.6750yesN/A
Q326L3TAL_SHIBS2, ., 2, ., 1, ., 20.60740.68530.6940yesN/A
Q47WR3TAL_COLP32, ., 2, ., 1, ., 20.62280.66040.6625yesN/A
Q0HFX9TAL_SHESM2, ., 2, ., 1, ., 20.60240.71020.7169yesN/A
Q0K979TAL_CUPNH2, ., 2, ., 1, ., 20.57910.67910.6855yesN/A
A3QBW2TAL_SHELP2, ., 2, ., 1, ., 20.65810.66970.6761yesN/A
Q32KB0TAL_SHIDS2, ., 2, ., 1, ., 20.61150.68530.6940yesN/A
A9R021TAL_YERPG2, ., 2, ., 1, ., 20.60880.68530.6940yesN/A
A3D1F5TAL_SHEB52, ., 2, ., 1, ., 20.58630.71020.7169yesN/A
B3R1I4TAL_CUPTR2, ., 2, ., 1, ., 20.57080.67910.6855yesN/A
A1RMN6TAL_SHESW2, ., 2, ., 1, ., 20.61040.71020.7169yesN/A
A4Y494TAL_SHEPC2, ., 2, ., 1, ., 20.61040.71020.7169yesN/A
A7FME9TAL_YERP32, ., 2, ., 1, ., 20.60880.68530.6940yesN/A
A6WKC4TAL_SHEB82, ., 2, ., 1, ., 20.59030.71020.7169yesN/A
Q9W1G0TALDO_DROME2, ., 2, ., 1, ., 20.65440.71020.6888yesN/A
P53228TAL2_YEAST2, ., 2, ., 1, ., 20.58890.67910.6546yesN/A
Q0I1U0TAL_HAES12, ., 2, ., 1, ., 20.59500.68530.6940yesN/A
Q93092TALDO_MOUSE2, ., 2, ., 1, ., 20.66940.68220.6498yesN/A
Q0HS72TAL_SHESR2, ., 2, ., 1, ., 20.60240.71020.7169yesN/A
B1JL09TAL_YERPY2, ., 2, ., 1, ., 20.60880.68530.6940yesN/A
Q5PDM6TAL1_SALPA2, ., 2, ., 1, ., 20.61150.68530.6940yesN/A
Q15PR4TAL_PSEA62, ., 2, ., 1, ., 20.62850.69780.7066yesN/A
B0BRM0TAL_ACTPJ2, ., 2, ., 1, ., 20.58530.70090.7142yesN/A
Q8VI73TALDO_CRIGR2, ., 2, ., 1, ., 20.68220.68220.6498yesN/A
P66955TALB_SALTY2, ., 2, ., 1, ., 20.61150.68530.6940yesN/A
P37837TALDO_HUMAN2, ., 2, ., 1, ., 20.66940.68220.6498yesN/A
B8CSD3TAL_SHEPW2, ., 2, ., 1, ., 20.66090.66660.6729yesN/A
A1S414TAL_SHEAM2, ., 2, ., 1, ., 20.6250.70710.7160yesN/A
Q66ET5TAL_YERPS2, ., 2, ., 1, ., 20.60480.68530.6940yesN/A
Q3Z606TAL1_SHISS2, ., 2, ., 1, ., 20.60740.68530.6940yesN/A
B2K3L5TAL_YERPB2, ., 2, ., 1, ., 20.60480.68530.6940yesN/A
Q2TBL6TALDO_BOVIN2, ., 2, ., 1, ., 20.66520.68220.6498yesN/A
B1KIS4TAL_SHEWM2, ., 2, ., 1, ., 20.64400.66350.6698yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.2.1.20.824
3rd Layer2.2.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
PRK05269318 PRK05269, PRK05269, transaldolase B; Provisional 1e-150
cd00957313 cd00957, Transaldolase_TalAB, Transaldolases inclu 1e-131
PTZ00411333 PTZ00411, PTZ00411, transaldolase-like protein; Pr 1e-124
TIGR00874317 TIGR00874, talAB, transaldolase 1e-123
PRK12346316 PRK12346, PRK12346, transaldolase A; Provisional 1e-120
PRK12309391 PRK12309, PRK12309, transaldolase/EF-hand domain-c 1e-112
pfam00923244 pfam00923, Transaldolase, Transaldolase 3e-69
COG0176239 COG0176, MipB, Transaldolase [Carbohydrate transpo 6e-64
cd00439252 cd00439, Transaldolase, Transaldolase 1e-53
cd00956211 cd00956, Transaldolase_FSA, Transaldolase-like fru 2e-21
PRK01362214 PRK01362, PRK01362, putative translaldolase; Provi 3e-20
TIGR00875213 TIGR00875, fsa_talC_mipB, fructose-6-phosphate ald 6e-16
PRK05269 318 PRK05269, PRK05269, transaldolase B; Provisional 5e-12
cd00957 313 cd00957, Transaldolase_TalAB, Transaldolases inclu 2e-10
cd00955338 cd00955, Transaldolase_like, Transaldolase-like pr 2e-10
PRK12346 316 PRK12346, PRK12346, transaldolase A; Provisional 3e-09
PRK03343368 PRK03343, PRK03343, transaldolase; Validated 3e-09
TIGR00874 317 TIGR00874, talAB, transaldolase 5e-09
PRK03903274 PRK03903, PRK03903, transaldolase; Provisional 6e-08
PRK12309 391 PRK12309, PRK12309, transaldolase/EF-hand domain-c 1e-07
PTZ00411 333 PTZ00411, PTZ00411, transaldolase-like protein; Pr 9e-07
PRK09533 948 PRK09533, PRK09533, bifunctional transaldolase/pho 2e-06
TIGR00876350 TIGR00876, tal_mycobact, transaldolase, mycobacter 2e-04
PRK12653220 PRK12653, PRK12653, fructose-6-phosphate aldolase; 2e-04
PRK12655220 PRK12655, PRK12655, fructose-6-phosphate aldolase; 0.001
pfam00923 244 pfam00923, Transaldolase, Transaldolase 0.002
>gnl|CDD|235381 PRK05269, PRK05269, transaldolase B; Provisional Back     alignment and domain information 
 Score =  425 bits (1095), Expect = e-150
 Identities = 161/248 (64%), Positives = 185/248 (74%), Gaps = 22/248 (8%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
           +DKL + FG EIL +IPGRVSTEVDARLSFD +A+IAKA+K I +YEEAGI K+RILIK+
Sbjct: 74  IDKLAVNFGLEILKLIPGRVSTEVDARLSFDTEATIAKARKLIALYEEAGISKDRILIKI 133

Query: 61  ASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISP--------------- 105
           ASTWEGI+AA+ LE E GI+CNLTLLF+FAQA ACAEAGV LISP               
Sbjct: 134 ASTWEGIRAAEQLEKE-GINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKKNTGK 192

Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
             YAP EDPGVVSVTKIYNYYKK GYKTVVMGASFRNTG+IL LAGCD +TI P LLEEL
Sbjct: 193 KEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNTGQILELAGCDRLTISPALLEEL 252

Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEK 223
             S   +++ LS     KA    + L E+ FRW+ NED MATEKL++GIRKFA D   EK
Sbjct: 253 AASEGELERKLSPPGEAKA--RPVPLTEAEFRWQHNEDAMATEKLAEGIRKFAKDQ--EK 308

Query: 224 LTKTFSAK 231
           L K  +AK
Sbjct: 309 LEKLIAAK 316

Length = 318
>gnl|CDD|188644 cd00957, Transaldolase_TalAB, Transaldolases including both TalA and TalB Back     alignment and domain information
>gnl|CDD|240406 PTZ00411, PTZ00411, transaldolase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|162081 TIGR00874, talAB, transaldolase Back     alignment and domain information
>gnl|CDD|183458 PRK12346, PRK12346, transaldolase A; Provisional Back     alignment and domain information
>gnl|CDD|183426 PRK12309, PRK12309, transaldolase/EF-hand domain-containing protein; Provisional Back     alignment and domain information
>gnl|CDD|216195 pfam00923, Transaldolase, Transaldolase Back     alignment and domain information
>gnl|CDD|223254 COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|188631 cd00439, Transaldolase, Transaldolase Back     alignment and domain information
>gnl|CDD|188643 cd00956, Transaldolase_FSA, Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea Back     alignment and domain information
>gnl|CDD|234947 PRK01362, PRK01362, putative translaldolase; Provisional Back     alignment and domain information
>gnl|CDD|129953 TIGR00875, fsa_talC_mipB, fructose-6-phosphate aldolase, TalC/MipB family Back     alignment and domain information
>gnl|CDD|235381 PRK05269, PRK05269, transaldolase B; Provisional Back     alignment and domain information
>gnl|CDD|188644 cd00957, Transaldolase_TalAB, Transaldolases including both TalA and TalB Back     alignment and domain information
>gnl|CDD|188642 cd00955, Transaldolase_like, Transaldolase-like proteins from plants and bacteria Back     alignment and domain information
>gnl|CDD|183458 PRK12346, PRK12346, transaldolase A; Provisional Back     alignment and domain information
>gnl|CDD|235117 PRK03343, PRK03343, transaldolase; Validated Back     alignment and domain information
>gnl|CDD|162081 TIGR00874, talAB, transaldolase Back     alignment and domain information
>gnl|CDD|235171 PRK03903, PRK03903, transaldolase; Provisional Back     alignment and domain information
>gnl|CDD|183426 PRK12309, PRK12309, transaldolase/EF-hand domain-containing protein; Provisional Back     alignment and domain information
>gnl|CDD|240406 PTZ00411, PTZ00411, transaldolase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|236551 PRK09533, PRK09533, bifunctional transaldolase/phosoglucose isomerase; Validated Back     alignment and domain information
>gnl|CDD|129954 TIGR00876, tal_mycobact, transaldolase, mycobacterial type Back     alignment and domain information
>gnl|CDD|183653 PRK12653, PRK12653, fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>gnl|CDD|183655 PRK12655, PRK12655, fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>gnl|CDD|216195 pfam00923, Transaldolase, Transaldolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 321
PRK12346316 transaldolase A; Provisional 100.0
TIGR00874317 talAB transaldolase. This family includes the majo 100.0
PTZ00411333 transaldolase-like protein; Provisional 100.0
cd00957313 Transaldolase_TalAB Transaldolases including both 100.0
PRK12309391 transaldolase/EF-hand domain-containing protein; P 100.0
KOG2772|consensus337 100.0
PRK05269318 transaldolase B; Provisional 100.0
PF00923287 Transaldolase: Transaldolase; InterPro: IPR001585 100.0
PRK03343368 transaldolase; Validated 100.0
COG0176239 MipB Transaldolase [Carbohydrate transport and met 100.0
cd00955338 Transaldolase_like Transaldolase-like proteins fro 100.0
cd00439252 Transaldolase Transaldolase. Enzymes found in the 100.0
PRK03903274 transaldolase; Provisional 100.0
TIGR00875213 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/ 100.0
PRK01362214 putative translaldolase; Provisional 100.0
PRK12656222 fructose-6-phosphate aldolase; Reviewed 100.0
PRK12655220 fructose-6-phosphate aldolase; Reviewed 100.0
PRK12653220 fructose-6-phosphate aldolase; Reviewed 100.0
TIGR00876350 tal_mycobact transaldolase, mycobacterial type. Th 100.0
PRK09533 948 bifunctional transaldolase/phosoglucose isomerase; 100.0
PRK12376236 putative translaldolase; Provisional 100.0
cd00956211 Transaldolase_FSA Transaldolase-like fructose-6-ph 100.0
TIGR02134236 transald_staph transaldolase. This small family of 100.0
KOG2772|consensus 337 99.08
PRK12346 316 transaldolase A; Provisional 98.37
PTZ00411 333 transaldolase-like protein; Provisional 98.32
TIGR00874 317 talAB transaldolase. This family includes the majo 98.26
cd00957 313 Transaldolase_TalAB Transaldolases including both 98.23
PRK05269 318 transaldolase B; Provisional 98.17
PRK12309 391 transaldolase/EF-hand domain-containing protein; P 98.03
PRK03343368 transaldolase; Validated 97.43
TIGR00876 350 tal_mycobact transaldolase, mycobacterial type. Th 96.33
cd02809299 alpha_hydroxyacid_oxid_FMN Family of homologous FM 96.17
cd00955 338 Transaldolase_like Transaldolase-like proteins fro 96.07
cd00439 252 Transaldolase Transaldolase. Enzymes found in the 95.82
TIGR01182204 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxypho 95.72
PRK06015201 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 95.69
PRK07114222 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 95.47
COG5016472 Pyruvate/oxaloacetate carboxyltransferase [Energy 95.11
PF00923 287 Transaldolase: Transaldolase; InterPro: IPR001585 95.0
PF01081196 Aldolase: KDPG and KHG aldolase; InterPro: IPR0008 94.95
PRK06552213 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 94.54
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 94.37
COG0176 239 MipB Transaldolase [Carbohydrate transport and met 93.94
COG0800211 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca 93.85
CHL00162267 thiG thiamin biosynthesis protein G; Validated 93.56
PRK00208250 thiG thiazole synthase; Reviewed 93.32
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 93.13
PLN02535364 glycolate oxidase 92.96
cd04728248 ThiG Thiazole synthase (ThiG) is the tetrameric en 92.8
PF03437254 BtpA: BtpA family; InterPro: IPR005137 Photosystem 92.42
PRK09140206 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; R 92.03
PF01070356 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR 92.0
PF05690247 ThiG: Thiazole biosynthesis protein ThiG; InterPro 90.67
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 90.66
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 90.06
cd04737351 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding d 89.66
cd03332383 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-bindin 89.21
PRK06806281 fructose-bisphosphate aldolase; Provisional 88.64
PRK11858378 aksA trans-homoaconitate synthase; Reviewed 88.5
cd02922344 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding dom 88.48
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 88.42
PRK11197381 lldD L-lactate dehydrogenase; Provisional 88.26
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 88.15
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 86.67
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 86.36
PLN02979366 glycolate oxidase 86.04
PRK05848273 nicotinate-nucleotide pyrophosphorylase; Provision 85.77
TIGR02660365 nifV_homocitr homocitrate synthase NifV. This fami 85.72
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 85.35
cd04741294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 84.57
PRK12331448 oxaloacetate decarboxylase; Provisional 84.11
PRK05692287 hydroxymethylglutaryl-CoA lyase; Provisional 83.92
TIGR02151333 IPP_isom_2 isopentenyl-diphosphate delta-isomerase 83.9
TIGR02708367 L_lactate_ox L-lactate oxidase. Members of this pr 83.89
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 83.74
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 83.5
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 83.38
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 83.32
PRK13398266 3-deoxy-7-phosphoheptulonate synthase; Provisional 82.98
PLN02746347 hydroxymethylglutaryl-CoA lyase 82.75
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 82.62
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 82.55
PLN02493367 probable peroxisomal (S)-2-hydroxy-acid oxidase 82.21
PRK09533 948 bifunctional transaldolase/phosoglucose isomerase; 81.81
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 81.76
cd03321355 mandelate_racemase Mandelate racemase (MR) catalyz 81.63
cd03315265 MLE_like Muconate lactonizing enzyme (MLE) like su 81.61
PRK12330499 oxaloacetate decarboxylase; Provisional 81.48
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 81.2
PRK00366360 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s 80.42
PRK12755353 phospho-2-dehydro-3-deoxyheptonate aldolase; Provi 80.18
>PRK12346 transaldolase A; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.8e-67  Score=503.01  Aligned_cols=227  Identities=63%  Similarity=0.989  Sum_probs=210.6

Q ss_pred             CcHHHHHHHHHHhccCCCcEEEEecCCcCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEecCCHHHHHHHHHHHHhhCce
Q psy10958          1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIH   80 (321)
Q Consensus         1 ~d~~~v~~~~~i~~~~~G~Vs~EV~p~la~d~e~~i~~A~~L~~~~~~~gi~~~nv~IKIPaT~eGi~A~~~L~~~~GI~   80 (321)
                      +|++.+.||.++++++||+||+||||++++|+++||++|++|+++|++.||+++|++||||+||+||+|+++|+++ ||+
T Consensus        73 ~D~l~v~~g~ei~~~v~G~Vs~EVdp~la~d~e~~i~~A~~l~~l~~~~gi~~~~i~IKIPaT~eGi~A~~~L~~~-GI~  151 (316)
T PRK12346         73 CDKLAVNFGAEILKSVPGRVSTEVDARLSFDREKSIEKARHLVDLYQQQGIDKSRILIKLASTWEGIRAAEELEKE-GIN  151 (316)
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEEccccccCHHHHHHHHHHHHHHhhhcCCCCCcEEEEeCCCHHHHHHHHHHHHC-CCc
Confidence            4899999999999999999999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             eeeeeccCHHHHHHHHHhcCceeecC-CCC----------------CCCchHHHHHHHHHHHhcCCceEEeecccCCHhH
Q psy10958         81 CNLTLLFAFAQAVACAEAGVTLISPY-APT----------------EDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGE  143 (321)
Q Consensus        81 vn~TlvFS~~Qa~aaa~Aga~~iSpf-~~~----------------~d~Gi~~v~~i~~~~~~~~~~T~vl~AS~r~~~~  143 (321)
                      ||+|+|||+.||.+|++|||+||||| +|+                ++||+.++++||++|+++||+|+||+|||||++|
T Consensus       152 ~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfRn~~q  231 (316)
T PRK12346        152 CNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRRTEQ  231 (316)
T ss_pred             eeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHHHHcCCCcEEEecccCCHHH
Confidence            99999999999999999999999999 332                5799999999999999999999999999999999


Q ss_pred             HHHHhCCCeEEeCHHHHHHHhcCCCCcccccCchhhhhcccccccCChHHHHHhcCcCcchHHHHHHHHhhhhcccchhc
Q psy10958        144 ILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEK  223 (321)
Q Consensus       144 v~~LaG~d~vTipp~~l~~l~~~~~~v~~~l~~~~~~~~~~~~l~~~e~~f~~~~~~d~~a~~~l~eGi~~F~~d~v~~K  223 (321)
                      |.+|+|||++||||+++++|.+++++++++|+++.+..                                          
T Consensus       232 i~alaG~d~lTi~p~ll~~L~~~~~~~~~~l~~~~~~~------------------------------------------  269 (316)
T PRK12346        232 ILALAGCDRLTISPNLLKELQESESPVERKLIPSSQTF------------------------------------------  269 (316)
T ss_pred             HHHHhCCCEEeCCHHHHHHHHhcCCCcccccChhhhcc------------------------------------------
Confidence            99999999999999999999998887777666421110                                          


Q ss_pred             hhhhhhhhcccCCcCCCChHHHHhHhccCchhhhhHHHHHhhHHHHHHHHHHHHHHHH
Q psy10958        224 LTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELI  281 (321)
Q Consensus       224 Ll~~laaka~~~~~~~~~e~~Fr~~~n~d~mA~ekL~egIr~F~~d~~~L~~~l~~~~  281 (321)
                                 ..+.++||++|||+||+|+||+|||+||||+|++|+.+|+++|++++
T Consensus       270 -----------~~~~~~~e~~fr~~~~~d~mA~ekl~eGIr~F~~d~~~Le~~i~~~~  316 (316)
T PRK12346        270 -----------PRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL  316 (316)
T ss_pred             -----------cCCCCCCHHHHHHHhCcCHhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence                       01246799999999999999999999999999999999999999875

>TIGR00874 talAB transaldolase Back     alignment and domain information
>PTZ00411 transaldolase-like protein; Provisional Back     alignment and domain information
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB Back     alignment and domain information
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional Back     alignment and domain information
>KOG2772|consensus Back     alignment and domain information
>PRK05269 transaldolase B; Provisional Back     alignment and domain information
>PF00923 Transaldolase: Transaldolase; InterPro: IPR001585 Transaldolase (2 Back     alignment and domain information
>PRK03343 transaldolase; Validated Back     alignment and domain information
>COG0176 MipB Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00955 Transaldolase_like Transaldolase-like proteins from plants and bacteria Back     alignment and domain information
>cd00439 Transaldolase Transaldolase Back     alignment and domain information
>PRK03903 transaldolase; Provisional Back     alignment and domain information
>TIGR00875 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/MipB family Back     alignment and domain information
>PRK01362 putative translaldolase; Provisional Back     alignment and domain information
>PRK12656 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>PRK12655 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>PRK12653 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>TIGR00876 tal_mycobact transaldolase, mycobacterial type Back     alignment and domain information
>PRK09533 bifunctional transaldolase/phosoglucose isomerase; Validated Back     alignment and domain information
>PRK12376 putative translaldolase; Provisional Back     alignment and domain information
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases Back     alignment and domain information
>TIGR02134 transald_staph transaldolase Back     alignment and domain information
>KOG2772|consensus Back     alignment and domain information
>PRK12346 transaldolase A; Provisional Back     alignment and domain information
>PTZ00411 transaldolase-like protein; Provisional Back     alignment and domain information
>TIGR00874 talAB transaldolase Back     alignment and domain information
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB Back     alignment and domain information
>PRK05269 transaldolase B; Provisional Back     alignment and domain information
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional Back     alignment and domain information
>PRK03343 transaldolase; Validated Back     alignment and domain information
>TIGR00876 tal_mycobact transaldolase, mycobacterial type Back     alignment and domain information
>cd02809 alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes Back     alignment and domain information
>cd00955 Transaldolase_like Transaldolase-like proteins from plants and bacteria Back     alignment and domain information
>cd00439 Transaldolase Transaldolase Back     alignment and domain information
>TIGR01182 eda Entner-Doudoroff aldolase Back     alignment and domain information
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion] Back     alignment and domain information
>PF00923 Transaldolase: Transaldolase; InterPro: IPR001585 Transaldolase (2 Back     alignment and domain information
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4 Back     alignment and domain information
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>COG0176 MipB Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>CHL00162 thiG thiamin biosynthesis protein G; Validated Back     alignment and domain information
>PRK00208 thiG thiazole synthase; Reviewed Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>PLN02535 glycolate oxidase Back     alignment and domain information
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism Back     alignment and domain information
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane Back     alignment and domain information
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed Back     alignment and domain information
>PF01070 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR000262 A number of oxidoreductases that act on alpha-hydroxy acids and which are FMN-containing flavoproteins have been shown [, , ] to be structurally related Back     alignment and domain information
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd04737 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding domain Back     alignment and domain information
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain Back     alignment and domain information
>PRK06806 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PRK11197 lldD L-lactate dehydrogenase; Provisional Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PLN02979 glycolate oxidase Back     alignment and domain information
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR02660 nifV_homocitr homocitrate synthase NifV Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>PRK12331 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional Back     alignment and domain information
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2 Back     alignment and domain information
>TIGR02708 L_lactate_ox L-lactate oxidase Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PLN02746 hydroxymethylglutaryl-CoA lyase Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PLN02493 probable peroxisomal (S)-2-hydroxy-acid oxidase Back     alignment and domain information
>PRK09533 bifunctional transaldolase/phosoglucose isomerase; Validated Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid Back     alignment and domain information
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily Back     alignment and domain information
>PRK12330 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed Back     alignment and domain information
>PRK12755 phospho-2-dehydro-3-deoxyheptonate aldolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
1f05_A337 Crystal Structure Of Human Transaldolase Length = 3 2e-81
1f05_A 337 Crystal Structure Of Human Transaldolase Length = 3 2e-06
2cwn_A332 Crystal Structure Of Mouse Transaldolase Length = 3 2e-80
2cwn_A 332 Crystal Structure Of Mouse Transaldolase Length = 3 6e-07
2e1d_A331 Crystal Structure Of Mouse Transaldolase Length = 3 2e-80
2e1d_A 331 Crystal Structure Of Mouse Transaldolase Length = 3 6e-07
1i2p_A316 Crystal Structure Of Escherichia Coli Transaldolase 9e-70
1i2p_A 316 Crystal Structure Of Escherichia Coli Transaldolase 1e-04
1i2n_A316 Crystal Structure Of Escherichia Coli Transaldolase 9e-70
1i2n_A 316 Crystal Structure Of Escherichia Coli Transaldolase 1e-04
1onr_A316 Structure Of Transaldolase B Length = 316 1e-69
1onr_A 316 Structure Of Transaldolase B Length = 316 1e-04
3cwn_A337 Escherichia Coli Transaldolase B Mutant F178y Lengt 1e-69
3cwn_A 337 Escherichia Coli Transaldolase B Mutant F178y Lengt 1e-04
3kof_A337 Crystal Structure Of The Double Mutant F178yR181E O 1e-69
3kof_A 337 Crystal Structure Of The Double Mutant F178yR181E O 1e-04
3m16_A329 Structure Of A Transaldolase From Oleispira Antarct 2e-69
1i2r_A316 Crystal Structure Of Escherichia Coli Transaldolase 2e-69
1i2r_A 316 Crystal Structure Of Escherichia Coli Transaldolase 1e-04
1i2q_A316 Crystal Structure Of Escherichia Coli Transaldolase 3e-69
1i2q_A 316 Crystal Structure Of Escherichia Coli Transaldolase 1e-04
1ucw_A317 Complex Of Transaldolase With The Reduced Schiff-Ba 4e-69
1ucw_A 317 Complex Of Transaldolase With The Reduced Schiff-Ba 1e-04
3cq0_A339 Crystal Structure Of Tal2_yeast Length = 339 4e-69
3cq0_A 339 Crystal Structure Of Tal2_yeast Length = 339 2e-07
1i2o_A316 Crystal Structure Of Escherichia Coli Transaldolase 5e-69
1i2o_A 316 Crystal Structure Of Escherichia Coli Transaldolase 5e-04
3hjz_A334 The Structure Of An Aldolase From Prochlorococcus M 3e-55
3hjz_A 334 The Structure Of An Aldolase From Prochlorococcus M 7e-04
3tk7_A345 2.0 Angstrom Resolution Crystal Structure Of Transa 3e-52
3te9_A345 1.8 Angstrom Resolution Crystal Structure Of K135m 2e-51
3igx_A324 1.85 Angstrom Resolution Crystal Structure Of Trans 3e-50
1vpx_A230 Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm 4e-11
3s0c_A223 Transaldolase Wt Of Thermoplasma Acidophilum Length 3e-08
3s1w_A223 Transaldolase Variant Lys86ala From Thermoplasma Ac 1e-07
3r8r_A212 Transaldolase From Bacillus Subtilis Length = 212 7e-06
3r5e_A360 Transaldolase From Corynebacterium Glutamicum Lengt 3e-05
1wx0_A223 Crystal Structure Of Transaldolase From Thermus The 8e-05
>pdb|1F05|A Chain A, Crystal Structure Of Human Transaldolase Length = 337 Back     alignment and structure 
Iteration: 1

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/236 (62%), Positives = 173/236 (73%), Gaps = 17/236 (7%)
Query: 1   MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
           +DKL +LFG EIL  IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAGI K+RILIKL
Sbjct: 84  IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGISKDRILIKL 143
Query: 61  ASTWEGIQAAKVLESEYGIHCNLTLLFXXXXXXXXXXXGVTLISP--------------- 105
           +STWEGIQA K LE ++GIHCN+TLLF           GVTLISP               
Sbjct: 144 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 203
Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
             Y P EDPGV SVTKIYNYYKKF YKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 204 KSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 263
Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDS 219
                 +  +LS K+A+ ++L+KI LDE +FRW  NED MA EKLSDGIRKFA D+
Sbjct: 264 LQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAVEKLSDGIRKFAADA 319
>pdb|1F05|A Chain A, Crystal Structure Of Human Transaldolase Length = 337 Back     alignment and structure
>pdb|2CWN|A Chain A, Crystal Structure Of Mouse Transaldolase Length = 332 Back     alignment and structure
>pdb|2CWN|A Chain A, Crystal Structure Of Mouse Transaldolase Length = 332 Back     alignment and structure
>pdb|2E1D|A Chain A, Crystal Structure Of Mouse Transaldolase Length = 331 Back     alignment and structure
>pdb|2E1D|A Chain A, Crystal Structure Of Mouse Transaldolase Length = 331 Back     alignment and structure
>pdb|1I2P|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant D17a Length = 316 Back     alignment and structure
>pdb|1I2P|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant D17a Length = 316 Back     alignment and structure
>pdb|1I2N|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant N35a Length = 316 Back     alignment and structure
>pdb|1I2N|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant N35a Length = 316 Back     alignment and structure
>pdb|1ONR|A Chain A, Structure Of Transaldolase B Length = 316 Back     alignment and structure
>pdb|1ONR|A Chain A, Structure Of Transaldolase B Length = 316 Back     alignment and structure
>pdb|3CWN|A Chain A, Escherichia Coli Transaldolase B Mutant F178y Length = 337 Back     alignment and structure
>pdb|3CWN|A Chain A, Escherichia Coli Transaldolase B Mutant F178y Length = 337 Back     alignment and structure
>pdb|3KOF|A Chain A, Crystal Structure Of The Double Mutant F178yR181E OF E.COLI Transaldolase B Length = 337 Back     alignment and structure
>pdb|3KOF|A Chain A, Crystal Structure Of The Double Mutant F178yR181E OF E.COLI Transaldolase B Length = 337 Back     alignment and structure
>pdb|3M16|A Chain A, Structure Of A Transaldolase From Oleispira Antarctica Length = 329 Back     alignment and structure
>pdb|1I2R|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant S176a Length = 316 Back     alignment and structure
>pdb|1I2R|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant S176a Length = 316 Back     alignment and structure
>pdb|1I2Q|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant T156a Length = 316 Back     alignment and structure
>pdb|1I2Q|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant T156a Length = 316 Back     alignment and structure
>pdb|1UCW|A Chain A, Complex Of Transaldolase With The Reduced Schiff-Base Intermediate Length = 317 Back     alignment and structure
>pdb|1UCW|A Chain A, Complex Of Transaldolase With The Reduced Schiff-Base Intermediate Length = 317 Back     alignment and structure
>pdb|3CQ0|A Chain A, Crystal Structure Of Tal2_yeast Length = 339 Back     alignment and structure
>pdb|3CQ0|A Chain A, Crystal Structure Of Tal2_yeast Length = 339 Back     alignment and structure
>pdb|1I2O|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant E96a Length = 316 Back     alignment and structure
>pdb|1I2O|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant E96a Length = 316 Back     alignment and structure
>pdb|3HJZ|A Chain A, The Structure Of An Aldolase From Prochlorococcus Marinus Length = 334 Back     alignment and structure
>pdb|3HJZ|A Chain A, The Structure Of An Aldolase From Prochlorococcus Marinus Length = 334 Back     alignment and structure
>pdb|3TK7|A Chain A, 2.0 Angstrom Resolution Crystal Structure Of Transaldolase B (Tala) From Francisella Tularensis In Covalent Complex With Fructose 6- Phosphate Length = 345 Back     alignment and structure
>pdb|3TE9|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of K135m Mutant Of Transaldolase B (Tala) From Francisella Tularensis In Complex With Fructose 6-Phosphate Length = 345 Back     alignment and structure
>pdb|3IGX|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Transaldolase B (Tala) From Francisella Tularensis. Length = 324 Back     alignment and structure
>pdb|1VPX|A Chain A, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295) From Thermotoga Maritima At 2.40 A Resolution Length = 230 Back     alignment and structure
>pdb|3S0C|A Chain A, Transaldolase Wt Of Thermoplasma Acidophilum Length = 223 Back     alignment and structure
>pdb|3S1W|A Chain A, Transaldolase Variant Lys86ala From Thermoplasma Acidophilum In Complex With Glycerol And Citrate Length = 223 Back     alignment and structure
>pdb|3R8R|A Chain A, Transaldolase From Bacillus Subtilis Length = 212 Back     alignment and structure
>pdb|3R5E|A Chain A, Transaldolase From Corynebacterium Glutamicum Length = 360 Back     alignment and structure
>pdb|1WX0|A Chain A, Crystal Structure Of Transaldolase From Thermus Thermophilus Hb8 Length = 223 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
2e1d_A331 Transaldolase; pentose phosphate pathway, structur 1e-104
2e1d_A 331 Transaldolase; pentose phosphate pathway, structur 2e-04
3cq0_A339 Putative transaldolase YGR043C; alpha/beta barrel, 1e-102
3cq0_A 339 Putative transaldolase YGR043C; alpha/beta barrel, 1e-04
3cwn_A337 Transaldolase B; directed evolution, cytoplasm, pe 3e-99
3cwn_A 337 Transaldolase B; directed evolution, cytoplasm, pe 8e-04
3m16_A329 Transaldolase; dimer, molecular replac swiss-model 6e-98
3m16_A 329 Transaldolase; dimer, molecular replac swiss-model 4e-05
3hjz_A334 Transaldolase B; parachlorococcus, marine, cyanoba 2e-97
3hjz_A 334 Transaldolase B; parachlorococcus, marine, cyanoba 2e-04
3tkf_A345 Transaldolase; structural genomics, center for str 4e-96
3tkf_A 345 Transaldolase; structural genomics, center for str 8e-04
3clm_A352 Transaldolase; YP_208650.1, structural genomics, j 5e-61
3r5e_A360 Transaldolase; pentose phosphate pathway, TIM barr 1e-60
3r5e_A 360 Transaldolase; pentose phosphate pathway, TIM barr 7e-04
1vpx_A230 Protein (transaldolase (EC 2.2.1.2)); TM0295, stru 6e-27
3s1x_A223 Probable transaldolase; alpha-beta barrel, conform 8e-27
3r8r_A212 Transaldolase; pentose phosphate pathway, schiff b 9e-27
1wx0_A223 Transaldolase; structural genomics, riken structur 2e-26
1l6w_A220 Fructose-6-phosphate aldolase 1; alpha-beta barrel 2e-24
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Length = 331 Back     alignment and structure
 Score =  307 bits (787), Expect = e-104
 Identities = 159/253 (62%), Positives = 190/253 (75%), Gaps = 19/253 (7%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
           +DKL +LFG EIL  IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAG+ K+RILIKL
Sbjct: 81  IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKL 140

Query: 61  ASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISP--------------- 105
           +STWEGIQA K LE ++GIHCN+TLLF+FAQAVACAEAGVTLISP               
Sbjct: 141 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 200

Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
             Y P  DPGV SVTKIYNYYKKFGYKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 201 KSYEPQGDPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 260

Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEK 223
               + +   LS K+A+ ++ +KI LDE AFRW  NED MA EKLSDGIRKFA D+   K
Sbjct: 261 LKDNSKLAPALSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADA--IK 318

Query: 224 LTKTFSAKKANLD 236
           L +  + +  + +
Sbjct: 319 LERMLTERMFSAE 331
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Length = 331 Back     alignment and structure
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Length = 339 Back     alignment and structure
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Length = 339 Back     alignment and structure
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Length = 337 Back     alignment and structure
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Length = 337 Back     alignment and structure
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} Length = 329 Back     alignment and structure
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} Length = 329 Back     alignment and structure
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Length = 334 Back     alignment and structure
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Length = 334 Back     alignment and structure
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Length = 345 Back     alignment and structure
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Length = 345 Back     alignment and structure
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae} Length = 352 Back     alignment and structure
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Length = 360 Back     alignment and structure
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Length = 360 Back     alignment and structure
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1 Length = 230 Back     alignment and structure
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A* Length = 223 Back     alignment and structure
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis} Length = 212 Back     alignment and structure
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1 Length = 223 Back     alignment and structure
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1 Length = 220 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
3hjz_A334 Transaldolase B; parachlorococcus, marine, cyanoba 100.0
3m16_A329 Transaldolase; dimer, molecular replac swiss-model 100.0
3cq0_A339 Putative transaldolase YGR043C; alpha/beta barrel, 100.0
3tkf_A345 Transaldolase; structural genomics, center for str 100.0
2e1d_A331 Transaldolase; pentose phosphate pathway, structur 100.0
3cwn_A337 Transaldolase B; directed evolution, cytoplasm, pe 100.0
3clm_A352 Transaldolase; YP_208650.1, structural genomics, j 100.0
3r8r_A212 Transaldolase; pentose phosphate pathway, schiff b 100.0
3r5e_A360 Transaldolase; pentose phosphate pathway, TIM barr 100.0
1vpx_A230 Protein (transaldolase (EC 2.2.1.2)); TM0295, stru 100.0
3s1x_A223 Probable transaldolase; alpha-beta barrel, conform 100.0
1wx0_A223 Transaldolase; structural genomics, riken structur 100.0
1l6w_A220 Fructose-6-phosphate aldolase 1; alpha-beta barrel 100.0
2e1d_A 331 Transaldolase; pentose phosphate pathway, structur 98.42
3cq0_A 339 Putative transaldolase YGR043C; alpha/beta barrel, 98.42
3cwn_A 337 Transaldolase B; directed evolution, cytoplasm, pe 98.4
3tkf_A 345 Transaldolase; structural genomics, center for str 98.3
3m16_A 329 Transaldolase; dimer, molecular replac swiss-model 98.3
3hjz_A 334 Transaldolase B; parachlorococcus, marine, cyanoba 98.26
3r5e_A 360 Transaldolase; pentose phosphate pathway, TIM barr 97.38
3clm_A352 Transaldolase; YP_208650.1, structural genomics, j 97.14
1wx0_A 223 Transaldolase; structural genomics, riken structur 94.85
1wv2_A265 Thiazole moeity, thiazole biosynthesis protein THI 94.72
2p10_A286 MLL9387 protein; putative phosphonopyruvate hydrol 94.39
2htm_A268 Thiazole biosynthesis protein THIG; thiamin biosyn 93.72
3lab_A217 Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) 93.21
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 93.05
3sgz_A352 Hydroxyacid oxidase 2; flavoprotein, homology, INH 92.95
2v82_A212 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l 92.71
1gox_A370 (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoredu 92.08
1wa3_A205 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, 91.87
3s1x_A 223 Probable transaldolase; alpha-beta barrel, conform 90.95
2nli_A368 Lactate oxidase; flavoenzyme, FMN, D-lactate, oxid 90.74
2nzl_A392 Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, G 90.29
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 90.21
3sr7_A365 Isopentenyl-diphosphate delta-isomerase; isopenten 90.21
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 90.2
3noy_A366 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 88.43
3ble_A337 Citramalate synthase from leptospira interrogans; 86.78
3vkj_A368 Isopentenyl-diphosphate delta-isomerase; type 2 is 85.6
1vpx_A 230 Protein (transaldolase (EC 2.2.1.2)); TM0295, stru 85.09
3ivs_A423 Homocitrate synthase, mitochondrial; TIM barrel, m 84.7
3r8r_A 212 Transaldolase; pentose phosphate pathway, schiff b 84.03
1kbi_A511 Cytochrome B2, L-LCR; flavocytochrome B2, electron 83.15
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 83.13
2nwr_A267 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KD 82.7
1vcf_A332 Isopentenyl-diphosphate delta-isomerase; TIM barre 82.55
1xm3_A264 Thiazole biosynthesis protein THIG; structural gen 82.35
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 82.0
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 81.43
3tml_A288 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, 81.26
3fs2_A298 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, 81.09
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 81.06
1p4c_A380 L(+)-mandelate dehydrogenase; TIM barrel, hydroxy 80.71
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 80.64
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Back     alignment and structure
Probab=100.00  E-value=1.9e-66  Score=498.58  Aligned_cols=230  Identities=56%  Similarity=0.908  Sum_probs=212.1

Q ss_pred             CcHHHHHHHHHHhccCCCcEEEEecCCcCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEecCCHHHHHHHHHHHHhhCce
Q psy10958          1 MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIH   80 (321)
Q Consensus         1 ~d~~~v~~~~~i~~~~~G~Vs~EV~p~la~d~e~~i~~A~~L~~~~~~~gi~~~nv~IKIPaT~eGi~A~~~L~~~~GI~   80 (321)
                      +|++.+.||++|++.++|+||+||+|++++|+++||++|++|+++|++.||+++||+||||+||+||+|+++|+++ ||+
T Consensus        78 ~D~l~v~~g~ei~~~v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~eGl~A~~~L~~~-GI~  156 (334)
T 3hjz_A           78 VDQVSVFFGKEILKIISGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKIAATWEGIKAAEILEKE-GIK  156 (334)
T ss_dssp             HHHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHT-TCC
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhhCCCCCcEEEEeCCCHHHHHHHHHHHHC-CCc
Confidence            4899999999999999999999999999999999999999999999999999999999999999999999999997 999


Q ss_pred             eeeeeccCHHHHHHHHHhcCceeecC-CCC----------------CCCchHHHHHHHHHHHhcCCceEEeecccCCHhH
Q psy10958         81 CNLTLLFAFAQAVACAEAGVTLISPY-APT----------------EDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGE  143 (321)
Q Consensus        81 vn~TlvFS~~Qa~aaa~Aga~~iSpf-~~~----------------~d~Gi~~v~~i~~~~~~~~~~T~vl~AS~r~~~~  143 (321)
                      ||+|+|||+.||++|++|||+||||| +|.                +|||+.++++||++|+++||+|+||||||||+.|
T Consensus       157 ~N~TliFS~~Qa~~aa~AGa~~ISPFVgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y~~~g~~T~vl~ASfRn~~~  236 (334)
T 3hjz_A          157 CNLTLLFNFCQAVTCANANITLISPFVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGFKTEVMGASFRNLDE  236 (334)
T ss_dssp             EEEESCCSHHHHHHHHHTTCSEECCBHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHHHHHTCCCEEEEBCCSSHHH
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEEeeccHHHHHhhhccCCcccccccCcHHHHHHHHHHHHHHcCCCCEEEEecCCCHHH
Confidence            99999999999999999999999999 332                2479999999999999999999999999999999


Q ss_pred             HHHHhCCCeEEeCHHHHHHHhcCCCCcccccCchhhhhcccccccCChHHHHHhcCcCcchHHHHHHHHhhhhcccchhc
Q psy10958        144 ILALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEK  223 (321)
Q Consensus       144 v~~LaG~d~vTipp~~l~~l~~~~~~v~~~l~~~~~~~~~~~~l~~~e~~f~~~~~~d~~a~~~l~eGi~~F~~d~v~~K  223 (321)
                      |.+|+|||++||||++|++|.+++++++++|+++.+..                                          
T Consensus       237 v~~laG~d~~Tipp~ll~~L~~~~~~~~~~L~~~~~~~------------------------------------------  274 (334)
T 3hjz_A          237 IKELAGCDLLTIAPKFLEELKREKGVLIRKLDASTKIN------------------------------------------  274 (334)
T ss_dssp             HHHTTTCSEEEECHHHHHHHHHCCSCCCCCCCCCCCCS------------------------------------------
T ss_pred             HHHHhCCCEEEcCHHHHHHHHhcCCCcccccCcccccc------------------------------------------
Confidence            99999999999999999999999898888777532111                                          


Q ss_pred             hhhhhhhhcccCCcCCCChHHHHhHhccCchhhhhHHHHHhhHHHHHHHHHHHHHHHHhc
Q psy10958        224 LTKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELILK  283 (321)
Q Consensus       224 Ll~~laaka~~~~~~~~~e~~Fr~~~n~d~mA~ekL~egIr~F~~d~~~L~~~l~~~~~~  283 (321)
                               .+. +..+||++|||+||+|+||+|||+||||+|++|+++||++|++|+..
T Consensus       275 ---------~~~-~~~~de~~fr~~~~~d~ma~ekl~eGIr~Fa~d~~kLe~~~~~~~~~  324 (334)
T 3hjz_A          275 ---------NSI-DYKFEEKDFRLSMLEDQMASEKLSEGITGFSKAIEELEELLIERLSE  324 (334)
T ss_dssp             ---------CCC-CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------ccc-cCcCCHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                     001 14579999999999999999999999999999999999999999753
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1 Back     alignment and structure
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Back     alignment and structure
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Back     alignment and structure
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Back     alignment and structure
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae} Back     alignment and structure
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis} Back     alignment and structure
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Back     alignment and structure
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1 Back     alignment and structure
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A* Back     alignment and structure
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1 Back     alignment and structure
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1 Back     alignment and structure
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Back     alignment and structure
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Back     alignment and structure
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Back     alignment and structure
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1 Back     alignment and structure
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Back     alignment and structure
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Back     alignment and structure
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae} Back     alignment and structure
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1 Back     alignment and structure
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 Back     alignment and structure
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 Back     alignment and structure
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus} Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A* Back     alignment and structure
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* Back     alignment and structure
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0 Back     alignment and structure
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A Back     alignment and structure
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A* Back     alignment and structure
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* Back     alignment and structure
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A* Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans} Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus} Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A* Back     alignment and structure
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1 Back     alignment and structure
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A* Back     alignment and structure
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis} Back     alignment and structure
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ... Back     alignment and structure
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A* Back     alignment and structure
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A Back     alignment and structure
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis} Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A* Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 321
d2e1da1319 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musc 2e-75
d2e1da1 319 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musc 2e-04
d1onra_316 c.1.10.1 (A:) Transaldolase {Escherichia coli [Tax 5e-71
d1onra_ 316 c.1.10.1 (A:) Transaldolase {Escherichia coli [Tax 0.001
d1wx0a1211 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate 1e-25
d1vpxa_218 c.1.10.1 (A:) Decameric fructose-6-phosphate aldol 2e-21
d1l6wa_220 c.1.10.1 (A:) Decameric fructose-6-phosphate aldol 1e-15
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Length = 319 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  232 bits (593), Expect = 2e-75
 Identities = 159/248 (64%), Positives = 188/248 (75%), Gaps = 19/248 (7%)

Query: 1   MDKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKL 60
           +DKL +LFG EIL  IPGRVSTEVDARLSFDKDA +A+A++ I++Y+EAG+ K+RILIKL
Sbjct: 72  IDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKL 131

Query: 61  ASTWEGIQAAKVLESEYGIHCNLTLLFAFAQAVACAEAGVTLISP--------------- 105
           +STWEGIQA K LE ++GIHCN+TLLF+FAQAVACAEAGVTLISP               
Sbjct: 132 SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDK 191

Query: 106 --YAPTEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEILALAGCDLMTIGPKLLEEL 163
             Y P  DPGV SVTKIYNYYKKFGYKT+VMGASFRNTGEI ALAGCD +TI PKLL EL
Sbjct: 192 KSYEPQGDPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGEL 251

Query: 164 ENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEK 223
               + +   LS K+A+ ++ +KI LDE AFRW  NED MA EKLSDGIRKFA D+   K
Sbjct: 252 LKDNSKLAPALSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADA--IK 309

Query: 224 LTKTFSAK 231
           L +  + +
Sbjct: 310 LERMLTER 317
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Length = 319 Back     information, alignment and structure
>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Length = 316 Back     information, alignment and structure
>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Length = 316 Back     information, alignment and structure
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]} Length = 211 Back     information, alignment and structure
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Length = 218 Back     information, alignment and structure
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]} Length = 220 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
d1onra_316 Transaldolase {Escherichia coli [TaxId: 562]} 100.0
d2e1da1319 Transaldolase {Mouse (Mus musculus) [TaxId: 10090] 100.0
d1wx0a1211 Decameric fructose-6-phosphate aldolase/transaldol 100.0
d1l6wa_220 Decameric fructose-6-phosphate aldolase/transaldol 100.0
d1vpxa_218 Decameric fructose-6-phosphate aldolase/transaldol 100.0
d1onra_ 316 Transaldolase {Escherichia coli [TaxId: 562]} 98.17
d2e1da1 319 Transaldolase {Mouse (Mus musculus) [TaxId: 10090] 97.82
d1wbha1213 KDPG aldolase {Escherichia coli [TaxId: 562]} 95.52
d1vhca_212 Hypothetical protein HI0047 {Haemophilus influenza 94.81
d1mxsa_216 KDPG aldolase {Pseudomonas putida [TaxId: 303]} 94.16
d1wa3a1202 KDPG aldolase {Thermotoga maritima [TaxId: 2336]} 92.84
d1xm3a_251 Thiazole biosynthesis protein ThiG {Bacillus subti 86.75
d1goxa_359 Glycolate oxidase {Spinach (Spinacia oleracea) [Ta 85.24
>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-63  Score=474.92  Aligned_cols=226  Identities=62%  Similarity=1.019  Sum_probs=208.4

Q ss_pred             cHHHHHHHHHHhccCCCcEEEEecCCcCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEecCCHHHHHHHHHHHHhhCcee
Q psy10958          2 DKLVILFGTEILNIIPGRVSTEVDARLSFDKDASIAKAKKYIKMYEEAGIDKERILIKLASTWEGIQAAKVLESEYGIHC   81 (321)
Q Consensus         2 d~~~v~~~~~i~~~~~G~Vs~EV~p~la~d~e~~i~~A~~L~~~~~~~gi~~~nv~IKIPaT~eGi~A~~~L~~~~GI~v   81 (321)
                      |++++++|.++++.+||+||+||||++++|+++||++|++|+++|++.|++++|++||||+||+||+|+++|+++ ||+|
T Consensus        74 d~l~v~~~~~i~~~v~G~VS~EVd~~l~~d~~~~i~~A~~l~~l~~~~~i~~~~i~IKIPaT~eGi~A~~~L~~~-GI~v  152 (316)
T d1onra_          74 DKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKE-GINC  152 (316)
T ss_dssp             HHHHHHHHHHHHTTCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHT-TCCE
T ss_pred             HHHHHHHHHHHHccCCCceeEEeccCccCCHHHHHHHHHHHHHHHHhcCCCCcceeeecCCcHHHHHHHHHHHHc-CCcc
Confidence            789999999999999999999999999999999999999999999999999999999999999999999999987 9999


Q ss_pred             eeeeccCHHHHHHHHHhcCceeecC-CC----------------CCCCchHHHHHHHHHHHhcCCceEEeecccCCHhHH
Q psy10958         82 NLTLLFAFAQAVACAEAGVTLISPY-AP----------------TEDPGVVSVTKIYNYYKKFGYKTVVMGASFRNTGEI  144 (321)
Q Consensus        82 n~TlvFS~~Qa~aaa~Aga~~iSpf-~~----------------~~d~Gi~~v~~i~~~~~~~~~~T~vl~AS~r~~~~v  144 (321)
                      |+|+|||+.||++|++|||+||||| +|                .++||+.+++++|++|+.+|++|+||+|||||+.||
T Consensus       153 N~TlvFS~~Qa~~aa~Aga~~iSpfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~t~v~~AS~r~~~~v  232 (316)
T d1onra_         153 NLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEI  232 (316)
T ss_dssp             EEEEECSHHHHHHHHHTTCSEEEEBSHHHHHHHHHSSSCCCCCGGGCHHHHHHHHHHHHHHHTTCCCEEEEBCCSSHHHH
T ss_pred             cceeeecHHHHHHHHHcCCeEEeeeecchhhhhhcccccccccccCCchHHHHHHHHHHHHHcCCCceeehhhccchhhH
Confidence            9999999999999999999999999 22                356899999999999999999999999999999999


Q ss_pred             HHHhCCCeEEeCHHHHHHHhcCCCCcccccCchhhhhcccccccCChHHHHHhcCcCcchHHHHHHHHhhhhcccchhch
Q psy10958        145 LALAGCDLMTIGPKLLEELENSTTPVDQMLSEKSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRNEKL  224 (321)
Q Consensus       145 ~~LaG~d~vTipp~~l~~l~~~~~~v~~~l~~~~~~~~~~~~l~~~e~~f~~~~~~d~~a~~~l~eGi~~F~~d~v~~KL  224 (321)
                      .+|+|||++|+||+++++|..+++++++.|++....                                            
T Consensus       233 ~~laG~D~~Ti~p~~l~~l~~~~~~~~~~l~~~~~~--------------------------------------------  268 (316)
T d1onra_         233 LELAGCDRLTIAPALLKELAESEGAIERKLSYTGEV--------------------------------------------  268 (316)
T ss_dssp             HHTTTSSEEEECHHHHHHHHHCBSCCCCCCCCCSCC--------------------------------------------
T ss_pred             HHHhcCCceecCHHHHHHHhhccCcccccCCccccc--------------------------------------------
Confidence            999999999999999999999887776666542110                                            


Q ss_pred             hhhhhhhcccCCcCCCChHHHHhHhccCchhhhhHHHHHhhHHHHHHHHHHHHHHHH
Q psy10958        225 TKTFSAKKANLDKITLDESAFRWELNEDPMATEKLSDGIRKFAVDSRKLETLLKELI  281 (321)
Q Consensus       225 l~~laaka~~~~~~~~~e~~Fr~~~n~d~mA~ekL~egIr~F~~d~~~L~~~l~~~~  281 (321)
                               ...+..+||++|||+||+|+||+|||+||||+|++|+++|+++|++||
T Consensus       269 ---------~~~~~~l~E~~Fr~~~~~d~ma~ekL~eGI~~F~~~~~kL~~~i~~~l  316 (316)
T d1onra_         269 ---------KARPARITESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL  316 (316)
T ss_dssp             ---------CCCCCCCCHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ---------cCCCCCCCHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence                     001135689999999999999999999999999999999999999875
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure