Psyllid ID: psy10964

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100---
Protein Sequence
MEELESFLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Secondary Structure (PSIPRED)
cHHHHccccccHHHHcccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccEHHccccccccHHHccccHHHHHHHHcccccccccEEEEEEEEEEHHEHHHHHHHHEEEHHEEHccccccHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MEELESFLADDMivyncsmndsmitsynWTVEHYLYcmrgpkrlhmsvlLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Flexible Loop (DISEMBL)
MEELESFLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Low Complexity Region (SEG)
MEELESFLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYlfslavsdltllllGR
Disordered region (IsUnstruct)
******FLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL**
Disordered Region (DISOPRED)
****E*F*ADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Disordered Region (DISEMBL)
MEELESFLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Disordered Region (DISPRO)
MEELESFLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEELESFLADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	103	2.2.26 [Sep-21-2011]
Q9GZQ4	415	Neuromedin-U receptor 2 O	yes	N/A	0.834	0.207	0.505	1e-13
Q8BZ39	395	Neuromedin-U receptor 2 O	yes	N/A	0.786	0.205	0.547	1e-13
Q9ESQ4	395	Neuromedin-U receptor 2 O	yes	N/A	0.786	0.205	0.5	2e-12
O55040	405	Neuromedin-U receptor 1 O	no	N/A	0.592	0.150	0.492	2e-10
Q8ITC7	477	Neuropeptides capa recept	no	N/A	0.805	0.174	0.481	3e-09
Q58CW4	407	Neuromedin-U receptor 2 O	yes	N/A	0.669	0.169	0.563	1e-07
Q9JJI5	412	Neuromedin-U receptor 1 O	no	N/A	0.475	0.118	0.450	1e-06
Q9HB89	426	Neuromedin-U receptor 1 O	no	N/A	0.475	0.115	0.431	1e-05
Q9EQD2	417	Neuropeptide FF receptor	no	N/A	0.398	0.098	0.512	2e-05
O43193	412	Motilin receptor OS=Homo	no	N/A	0.533	0.133	0.436	2e-05

>sp|Q9GZQ4|NMUR2_HUMAN Neuromedin-U receptor 2 OS=Homo sapiens GN=NMUR2 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)

Query: 14  VYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVV 73
           +Y   + D      N T E YL  + GP+R H    LP+++VY  IFV GVIGN+ VC+V
Sbjct: 13  IYQQKLEDPFQKHLNST-EEYLAFLCGPRRSHF--FLPVSVVYVPIFVVGVIGNVLVCLV 69

Query: 74  IINNTSLHTATNYYLFSLAVSDLTLLLLG 102
           I+ + ++ T TNYYLFSLAVSDL +LLLG
Sbjct: 70  ILQHQAMKTPTNYYLFSLAVSDLLVLLLG 98

Receptor for the neuromedin-U and neuromedin-S neuropeptides.
Homo sapiens (taxid: 9606)

>sp|Q8BZ39|NMUR2_MOUSE Neuromedin-U receptor 2 OS=Mus musculus GN=Nmur2 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 3/84 (3%)

Query: 19  MNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNT 78
           ++DS++   N + E YL  + GPKR  +S  LP+++VY  IFV GVIGN+ VC+VI  + 
Sbjct: 10  IHDSLMKYLN-STEEYLAYLCGPKRSDLS--LPVSVVYALIFVVGVIGNLLVCLVIARHQ 66

Query: 79  SLHTATNYYLFSLAVSDLTLLLLG 102
           +L T TNYYLFSLAVSDL +LLLG
Sbjct: 67  TLKTPTNYYLFSLAVSDLLVLLLG 90

Receptor for the neuromedin-U and neuromedin-S neuropeptides.

Mus musculus (taxid: 10090)

>sp|Q9ESQ4|NMUR2_RAT Neuromedin-U receptor 2 OS=Rattus norvegicus GN=Nmur2 PE=1 SV=2

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 3/84 (3%)

Query: 19  MNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNT 78
           ++D ++   N + E YL  + GPKR  +S  LP+++ Y  IF+ GV+GN+ VC+VI+ + 
Sbjct: 10  IHDPLMKYLN-STEEYLAHLCGPKRSDLS--LPVSVAYALIFLVGVMGNLLVCMVIVRHQ 66

Query: 79  SLHTATNYYLFSLAVSDLTLLLLG 102
           +L T TNYYLFSLAVSDL +LLLG
Sbjct: 67  TLKTPTNYYLFSLAVSDLLVLLLG 90

Receptor for the neuromedin-U and neuromedin-S neuropeptides.

Rattus norvegicus (taxid: 10116)

>sp|O55040|NMUR1_MOUSE Neuromedin-U receptor 1 OS=Mus musculus GN=Nmur1 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 40  GPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLL 99
           GP++  M   +PI + Y  IFV G +GN   C VI+ N ++ T TN+YLFSLAVSD+ +L
Sbjct: 30  GPQQ--MKQFVPICVTYLLIFVVGTLGNGLTCTVILRNKTMRTPTNFYLFSLAVSDMLVL 87

Query: 100 LLG 102
           L+G
Sbjct: 88  LVG 90

Receptor for the neuromedin-U and neuromedin-S neuropeptides.

Mus musculus (taxid: 10090)

>sp|Q8ITC7|CAPAR_DROME Neuropeptides capa receptor OS=Drosophila melanogaster GN=capaR PE=2 SV=3

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 60/83 (72%)

Query: 20  NDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTS 79
            D    ++N + + ++  + GP+ L +   + ITI++ GIF+TGV+GN+ VC+VII +++
Sbjct: 39  EDYACGTFNCSPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSA 98

Query: 80  LHTATNYYLFSLAVSDLTLLLLG 102
           +HTATNYYLFSLAVSDL  LL G
Sbjct: 99  MHTATNYYLFSLAVSDLLYLLFG 121

Acts as a receptor for the neuropeptides CAP-1 and CAP-2, but not CAP-3. Probably a component of signal transduction pathway that leads to Malpighian tubule fluid secretion in response to these ligands.

Drosophila melanogaster (taxid: 7227)

>sp|Q58CW4|NMUR2_BOVIN Neuromedin-U receptor 2 OS=Bos taurus GN=NMUR2 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 2/71 (2%)

Query: 32  EHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSL 91
           + YL  + GP+R H+   LP+T VY  IFV GV+GN+ VC+VI+ + ++ T TNYYLFSL
Sbjct: 27  DDYLALLCGPRRSHL--FLPVTAVYALIFVVGVVGNLLVCLVILRHQTMKTPTNYYLFSL 84

Query: 92  AVSDLTLLLLG 102
           AVSDL +LLLG
Sbjct: 85  AVSDLLVLLLG 95

Receptor for the neuromedin-U and neuromedin-S neuropeptides.

Bos taurus (taxid: 9913)

>sp|Q9JJI5|NMUR1_RAT Neuromedin-U receptor 1 OS=Rattus norvegicus GN=Nmur1 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 40 GPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFS 90
          GP+++     LPI + Y  IFV G +GN   C VI+   ++HT TN+YLFS
Sbjct: 40 GPQQVKQ--FLPICVTYLLIFVVGTLGNGLTCTVILRQKAMHTPTNFYLFS 88

Receptor for the neuromedin-U and neuromedin-S neuropeptides.

Rattus norvegicus (taxid: 10116)

>sp|Q9HB89|NMUR1_HUMAN Neuromedin-U receptor 1 OS=Homo sapiens GN=NMUR1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 40  GPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFS 90
           GP++  +   +PI   Y  IFV G +GN   C+VI+ + ++ T TNYYLFS
Sbjct: 53  GPQQTEL--FMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYLFS 101

Receptor for the neuromedin-U and neuromedin-S neuropeptides.

Homo sapiens (taxid: 9606)

>sp|Q9EQD2|NPFF2_RAT Neuropeptide FF receptor 2 OS=Rattus norvegicus GN=Npffr2 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 30/41 (73%)

Query: 56 YFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDL 96
          YF IF   ++GN  VC V+I N  +HT TN+++F+LA+SDL
Sbjct: 52 YFLIFFLCMVGNTVVCFVVIRNRYMHTVTNFFIFNLAISDL 92

Receptor for NPAF (A-18-F-amide) and NPFF (F-8-F-amide) neuropeptides, also known as morphine-modulating peptides. Can also be activated by a variety of naturally occurring or synthetic FMRF-amide like ligands. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.

Rattus norvegicus (taxid: 10116)

>sp|O43193|MTLR_HUMAN Motilin receptor OS=Homo sapiens GN=MLNR PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 46  MSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL 100
           +  L+P+T V   +FV GV GN+   ++I     + T TN YL S+AVSDL +LL
Sbjct: 35  LGALVPVTAVCLCLFVVGVSGNVVTVMLIGRYRDMRTTTNLYLGSMAVSDLLILL 89

Receptor for motilin.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
242011753	474	G-protein coupled octopamine receptor, p	0.825	0.179	0.588	3e-20
328710440	502	PREDICTED: neuropeptides capa receptor-l	0.660	0.135	0.705	5e-19
340710406	465	PREDICTED: neuropeptides capa receptor-l	0.728	0.161	0.586	1e-17
350415577	465	PREDICTED: neuropeptides capa receptor-l	0.728	0.161	0.586	1e-17
307207300	533	Neuropeptides capa receptor [Harpegnatho	0.728	0.140	0.573	3e-17
383856235	659	PREDICTED: G-protein coupled receptor 16	0.737	0.115	0.571	4e-17
383853616	456	PREDICTED: neuropeptides capa receptor-l	0.728	0.164	0.586	5e-17
345481477	603	PREDICTED: neuropeptide Y receptor-like	0.747	0.127	0.555	2e-16
148277568	381	capa receptor-like GPCR [Apis mellifera]	0.728	0.196	0.586	2e-16
118780947	493	AGAP000658-PA [Anopheles gambiae str. PE	0.631	0.131	0.646	3e-16

>gi|242011753|ref|XP_002426611.1| G-protein coupled octopamine receptor, putative [Pediculus humanus corporis] gi|212510760|gb|EEB13873.1| G-protein coupled octopamine receptor, putative [Pediculus humanus corporis]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 65/85 (76%)

Query: 18  SMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINN 77
           + +D    ++N ++E YL    GPK L ++ ++P+T++Y  IFVTG+ GNI+VCVVII N
Sbjct: 20  TRDDEDSVNFNISLEQYLLRTLGPKHLALTTVIPLTVIYIFIFVTGIFGNISVCVVIIKN 79

Query: 78  TSLHTATNYYLFSLAVSDLTLLLLG 102
            SLHTATNYYLFSLAVSDLTLL LG
Sbjct: 80  PSLHTATNYYLFSLAVSDLTLLTLG 104

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710440|ref|XP_001950333.2| PREDICTED: neuropeptides capa receptor-like [Acyrthosiphon pisum]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 56/68 (82%)

Query: 28 NWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
          N TVE YL   RGPK L ++++LPIT++Y  IFVTGVIGNIAVCVVI+ N  +HTATNYY
Sbjct: 18 NETVEGYLLRTRGPKHLSLNIVLPITVIYVFIFVTGVIGNIAVCVVIVRNNFMHTATNYY 77

Query: 88 LFSLAVSD 95
          LFSLAVSD
Sbjct: 78 LFSLAVSD 85

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710406|ref|XP_003393782.1| PREDICTED: neuropeptides capa receptor-like [Bombus terrestris]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 57/75 (76%)

Query: 28  NWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
           N T + YL  + GPK L + +++P+TI Y  IFVTG+ GN+  C+VII N S+HTATNYY
Sbjct: 22  NLTEDEYLATVLGPKYLPLKMVIPLTIAYVTIFVTGIFGNVTTCIVIIRNPSMHTATNYY 81

Query: 88  LFSLAVSDLTLLLLG 102
           LFSLA+SDL LL+LG
Sbjct: 82  LFSLAISDLILLVLG 96

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415577|ref|XP_003490685.1| PREDICTED: neuropeptides capa receptor-like [Bombus impatiens]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 57/75 (76%)

Query: 28  NWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
           N T + YL  + GPK L + +++P+TI Y  IFVTG+ GN+  C+VII N S+HTATNYY
Sbjct: 22  NLTEDEYLATVLGPKYLPLKMVIPLTIAYVTIFVTGIFGNVTTCIVIIRNPSMHTATNYY 81

Query: 88  LFSLAVSDLTLLLLG 102
           LFSLA+SDL LL+LG
Sbjct: 82  LFSLAISDLILLVLG 96

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207300|gb|EFN85050.1| Neuropeptides capa receptor [Harpegnathos saltator]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 56/75 (74%)

Query: 28  NWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
           N     YL  + GPK L M +++P+TIVY  +FVTG+ GN+A C VI+ N S+ +ATNYY
Sbjct: 20  NLNEAEYLDRVLGPKYLPMKMVIPLTIVYMAVFVTGIFGNVATCTVIVRNASMQSATNYY 79

Query: 88  LFSLAVSDLTLLLLG 102
           LFSLA+SDLTLL+LG
Sbjct: 80  LFSLAISDLTLLILG 94

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856235|ref|XP_003703615.1| PREDICTED: G-protein coupled receptor 161-like [Megachile rotundata]

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/77 (57%), Positives = 58/77 (75%), Gaps = 1/77 (1%)

Query: 27  YNWTVEHYLY-CMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATN 85
           YN TV++Y    +  P+R  + +++P+TI+Y  IFVTG IGNI+ C+VI  N S+HTATN
Sbjct: 27  YNGTVDNYFQDIVHPPRRDSLFIVVPVTIIYASIFVTGTIGNISTCIVIARNKSMHTATN 86

Query: 86  YYLFSLAVSDLTLLLLG 102
           YYLFSLAVSDL LL+ G
Sbjct: 87  YYLFSLAVSDLLLLVCG 103

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853616|ref|XP_003702318.1| PREDICTED: neuropeptides capa receptor-like [Megachile rotundata]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 56/75 (74%)

Query: 28  NWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
           N T   YL  + GPK L + +++P+TI Y  IFVTG+ GN+A C VI+ N S+ TATNYY
Sbjct: 18  NLTEAEYLTKVLGPKYLPLKMVIPLTITYVVIFVTGIFGNVATCTVIVRNPSMQTATNYY 77

Query: 88  LFSLAVSDLTLLLLG 102
           LFSLA+SDLTLL+LG
Sbjct: 78  LFSLAISDLTLLVLG 92

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481477|ref|XP_001606201.2| PREDICTED: neuropeptide Y receptor-like [Nasonia vitripennis]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 4/81 (4%)

Query: 26  SYNWTVEHYLY----CMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLH 81
           S N+  E YL        GP R  + V++PI+I+Y  IFVTG +GNI+ C+VI  N S+H
Sbjct: 11  SSNFVGEEYLVDPLKATFGPVRDQLYVVIPISIIYASIFVTGTVGNISTCIVIARNKSMH 70

Query: 82  TATNYYLFSLAVSDLTLLLLG 102
           TATNYYLFSLAVSDL LL+ G
Sbjct: 71  TATNYYLFSLAVSDLLLLIFG 91

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|148277568|ref|NP_001091702.1| capa receptor-like GPCR [Apis mellifera] gi|77921736|gb|ABB05503.1| capa receptor-like GPCR [Apis mellifera]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 55/75 (73%)

Query: 28  NWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
           N T   YL  + GPK L M +++P+TI+Y  IFVTG+ GNI  C VII N ++ TATNYY
Sbjct: 19  NLTEAEYLAKVLGPKYLSMRMVIPLTIIYMIIFVTGIFGNITTCTVIIKNPAMQTATNYY 78

Query: 88  LFSLAVSDLTLLLLG 102
           LFSLA+SDL LL+LG
Sbjct: 79  LFSLAISDLILLVLG 93

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118780947|ref|XP_311184.3| AGAP000658-PA [Anopheles gambiae str. PEST] gi|34419232|tpg|DAA01375.1| TPA_exp: putative pyrokinin receptor [Anopheles gambiae str. PEST] gi|116130188|gb|EAA06972.3| AGAP000658-PA [Anopheles gambiae str. PEST]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 52/65 (80%)

Query: 38  MRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLT 97
           M GPKR  + V++PITI+Y  IF+TGV+GNI+ C+VI  N S+HTATNYYLFSLAVSD  
Sbjct: 87  MYGPKRDPLYVVIPITIIYLLIFITGVVGNISTCIVIARNRSMHTATNYYLFSLAVSDFL 146

Query: 98  LLLLG 102
           LL+ G
Sbjct: 147 LLVSG 151

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
FB|FBgn0038201	430	Pk1r "Pyrokinin 1 receptor" [D	0.466	0.111	0.562	4.1e-11
FB|FBgn0037100	477	capaR "capa receptor" [Drosoph	0.601	0.129	0.435	1e-10
UNIPROTKB|Q9GZQ4	415	NMUR2 "Neuromedin-U receptor 2	0.689	0.171	0.432	1.3e-10
MGI|MGI:2441765	395	Nmur2 "neuromedin U receptor 2	0.669	0.174	0.493	1.5e-10
UNIPROTKB|F1RQB8	407	NMUR2 "Uncharacterized protein	0.737	0.186	0.392	7.4e-10
UNIPROTKB|Q58CW4	407	NMUR2 "Neuromedin-U receptor 2	0.689	0.174	0.418	1.6e-09
UNIPROTKB|E1BX29	395	NMUR2 "Neuromedin U receptor t	0.543	0.141	0.5	1.9e-09
RGD|621155	395	Nmur2 "neuromedin U receptor 2	0.669	0.174	0.438	3.1e-09
UNIPROTKB|E2RBT8	378	NMUR2 "Uncharacterized protein	0.543	0.148	0.465	2.6e-07
WB|WBGene00019616	403	nmur-2 [Caenorhabditis elegans	0.592	0.151	0.370	7.9e-07

FB|FBgn0038201 Pk1r "Pyrokinin 1 receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 161 (61.7 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 27/48 (56%), Positives = 39/48 (81%)

Query:    40 GPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
             GP R  +++++P+T+VY  IF+TGV+GNI+ C+VI  N S+HTATNYY
Sbjct:    11 GPPRDPLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYY 58

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS;NAS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0016520 "growth hormone-releasing hormone receptor activity" evidence=ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS;IDA;NAS

GO:0004930 "G-protein coupled receptor activity" evidence=ISS;IDA

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0007218 "neuropeptide signaling pathway" evidence=IDA

FB|FBgn0037100 capaR "capa receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 158 (60.7 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 27/62 (43%), Positives = 47/62 (75%)

Query:    26 SYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATN 85
             ++N + + ++  + GP+ L +   + ITI++ GIF+TGV+GN+ VC+VII ++++HTATN
Sbjct:    45 TFNCSPKEFVAFVLGPQTLPLYKAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATN 104

Query:    86 YY 87
             YY
Sbjct:   105 YY 106

GO:0004930 "G-protein coupled receptor activity" evidence=ISS;IDA

GO:0008188 "neuropeptide receptor activity" evidence=ISS;NAS;IDA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS;NAS

GO:0016021 "integral to membrane" evidence=IEA;ISS;NAS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0007589 "body fluid secretion" evidence=TAS

GO:0001607 "neuromedin U receptor activity" evidence=IEA

GO:0051928 "positive regulation of calcium ion transport" evidence=IMP

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0071465 "cellular response to desiccation" evidence=IMP

UNIPROTKB|Q9GZQ4 NMUR2 "Neuromedin-U receptor 2" [Homo sapiens (taxid:9606)]

 Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 32/74 (43%), Positives = 45/74 (60%)

Query:    14 VYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVV 73
             +Y   + D      N T E YL  + GP+R H    LP+++VY  IFV GVIGN+ VC+V
Sbjct:    13 IYQQKLEDPFQKHLNST-EEYLAFLCGPRRSHF--FLPVSVVYVPIFVVGVIGNVLVCLV 69

Query:    74 IINNTSLHTATNYY 87
             I+ + ++ T TNYY
Sbjct:    70 ILQHQAMKTPTNYY 83

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0048265 "response to pain" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IDA

GO:0050482 "arachidonic acid secretion" evidence=IDA

GO:0042924 "neuromedin U binding" evidence=IDA

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=IDA

GO:0019722 "calcium-mediated signaling" evidence=NAS

GO:0005525 "GTP binding" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

GO:0048016 "inositol phosphate-mediated signaling" evidence=IDA

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=IDA

GO:0007417 "central nervous system development" evidence=IEP

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IDA

GO:0001607 "neuromedin U receptor activity" evidence=IDA

GO:0006940 "regulation of smooth muscle contraction" evidence=NAS

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IDA

GO:0004930 "G-protein coupled receptor activity" evidence=TAS

GO:0007218 "neuropeptide signaling pathway" evidence=TAS

GO:0007631 "feeding behavior" evidence=TAS

GO:0007267 "cell-cell signaling" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

MGI|MGI:2441765 Nmur2 "neuromedin U receptor 2" [Mus musculus (taxid:10090)]

 Score = 155 (59.6 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 36/73 (49%), Positives = 49/73 (67%)

Query:    16 NCS-MNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVI 74
             N S ++DS++   N T E YL  + GPKR  +S  LP+++VY  IFV GVIGN+ VC+VI
Sbjct:     6 NASWIHDSLMKYLNST-EEYLAYLCGPKRSDLS--LPVSVVYALIFVVGVIGNLLVCLVI 62

Query:    75 INNTSLHTATNYY 87
               + +L T TNYY
Sbjct:    63 ARHQTLKTPTNYY 75

GO:0001607 "neuromedin U receptor activity" evidence=ISO

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IMP

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=ISO

GO:0005525 "GTP binding" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006816 "calcium ion transport" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=ISO

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=ISO

GO:0007218 "neuropeptide signaling pathway" evidence=IDA;IPI

GO:0007268 "synaptic transmission" evidence=IPI

GO:0007625 "grooming behavior" evidence=IMP

GO:0008188 "neuropeptide receptor activity" evidence=ISO;IPI

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISO;IC

GO:0042924 "neuromedin U binding" evidence=ISO

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=ISO

GO:0048016 "inositol phosphate-mediated signaling" evidence=ISO

GO:0048265 "response to pain" evidence=IMP

GO:0050482 "arachidonic acid secretion" evidence=ISO

UNIPROTKB|F1RQB8 NMUR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 149 (57.5 bits), Expect = 7.4e-10, P = 7.4e-10
 Identities = 31/79 (39%), Positives = 49/79 (62%)

Query:     9 ADDMIVYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNI 68
             A+  ++Y+  + +  +  Y    + YL  + GP+R H+   LP+T+VY  IFV GV GNI
Sbjct:     5 ANVSLIYHQDL-EYPLKEYMNNTDDYLALLCGPRRSHL--FLPVTVVYALIFVVGVAGNI 61

Query:    69 AVCVVIINNTSLHTATNYY 87
              VC+VI+ + ++ T TNYY
Sbjct:    62 LVCLVILRHQTMKTPTNYY 80

GO:0050482 "arachidonic acid secretion" evidence=IEA

GO:0048265 "response to pain" evidence=IEA

GO:0048016 "inositol phosphate-mediated signaling" evidence=IEA

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=IEA

GO:0042924 "neuromedin U binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=IEA

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IEA

GO:0001607 "neuromedin U receptor activity" evidence=IEA

UNIPROTKB|Q58CW4 NMUR2 "Neuromedin-U receptor 2" [Bos taurus (taxid:9913)]

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 31/74 (41%), Positives = 45/74 (60%)

Query:    14 VYNCSMNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVV 73
             +Y   + D      N T + YL  + GP+R H+   LP+T VY  IFV GV+GN+ VC+V
Sbjct:    10 MYQQELKDPFKKYLNNT-DDYLALLCGPRRSHL--FLPVTAVYALIFVVGVVGNLLVCLV 66

Query:    74 IINNTSLHTATNYY 87
             I+ + ++ T TNYY
Sbjct:    67 ILRHQTMKTPTNYY 80

GO:0005886 "plasma membrane" evidence=IEA

GO:0050482 "arachidonic acid secretion" evidence=IEA

GO:0048265 "response to pain" evidence=IEA

GO:0048016 "inositol phosphate-mediated signaling" evidence=IEA

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=IEA

GO:0042924 "neuromedin U binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=IEA

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IEA

GO:0001607 "neuromedin U receptor activity" evidence=IEA

UNIPROTKB|E1BX29 NMUR2 "Neuromedin U receptor type 2" [Gallus gallus (taxid:9031)]

 Score = 145 (56.1 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query:    30 TVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
             + E YL  + GPKR H+   LP+ +VY  IFV GVIGN  VC+VI+ + ++ T TNYY
Sbjct:    25 STEDYLAFLCGPKRSHL--FLPMALVYSVIFVVGVIGNFLVCLVILKHQNMKTPTNYY 80

GO:0001607 "neuromedin U receptor activity" evidence=IEA

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IEA

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0042924 "neuromedin U binding" evidence=IEA

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=IEA

GO:0048016 "inositol phosphate-mediated signaling" evidence=IEA

GO:0048265 "response to pain" evidence=IEA

GO:0050482 "arachidonic acid secretion" evidence=IEA

RGD|621155 Nmur2 "neuromedin U receptor 2" [Rattus norvegicus (taxid:10116)]

 Score = 143 (55.4 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 32/73 (43%), Positives = 48/73 (65%)

Query:    16 NCS-MNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVI 74
             N S ++D ++   N T E YL  + GPKR  +S  LP+++ Y  IF+ GV+GN+ VC+VI
Sbjct:     6 NASWIHDPLMKYLNST-EEYLAHLCGPKRSDLS--LPVSVAYALIFLVGVMGNLLVCMVI 62

Query:    75 INNTSLHTATNYY 87
             + + +L T TNYY
Sbjct:    63 VRHQTLKTPTNYY 75

GO:0001607 "neuromedin U receptor activity" evidence=IEA;ISO

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IEA;ISO

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=IEA;ISO

GO:0005525 "GTP binding" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA;ISO

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISO

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA;ISO

GO:0007218 "neuropeptide signaling pathway" evidence=ISO

GO:0007268 "synaptic transmission" evidence=ISO

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0007625 "grooming behavior" evidence=IEA;ISO

GO:0008188 "neuropeptide receptor activity" evidence=ISO;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISO

GO:0042924 "neuromedin U binding" evidence=IEA;ISO

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=IEA;ISO

GO:0048016 "inositol phosphate-mediated signaling" evidence=IEA;ISO

GO:0048265 "response to pain" evidence=IEA;ISO

GO:0050482 "arachidonic acid secretion" evidence=IEA;ISO

UNIPROTKB|E2RBT8 NMUR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 125 (49.1 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 27/58 (46%), Positives = 35/58 (60%)

Query:    30 TVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYY 87
             + E YL  + GP R       P+T VY  IFV GVIGN  VC+VI+ + ++ T TNYY
Sbjct:     3 STEDYLAFLYGPPRSQF--FFPVTAVYALIFVVGVIGNFLVCLVILWHQTMKTPTNYY 58

GO:0050482 "arachidonic acid secretion" evidence=IEA

GO:0048265 "response to pain" evidence=IEA

GO:0048016 "inositol phosphate-mediated signaling" evidence=IEA

GO:0043006 "activation of phospholipase A2 activity by calcium-mediated signaling" evidence=IEA

GO:0042924 "neuromedin U binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005229 "intracellular calcium activated chloride channel activity" evidence=IEA

GO:0002023 "reduction of food intake in response to dietary excess" evidence=IEA

GO:0001607 "neuromedin U receptor activity" evidence=IEA

WB|WBGene00019616 nmur-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 121 (47.7 bits), Expect = 7.9e-07, P = 7.9e-07
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query:    27 YNWT-VEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATN 85
             YN + +  Y+    G +     +++P  I+Y  IF+ G+ GNI  C+VI  N S+H  TN
Sbjct:     8 YNVSEITEYVLSTLGERCQSAGIVIPTVIIYGTIFLLGLFGNICTCIVIAANKSMHNPTN 67

Query:    86 YY 87
             YY
Sbjct:    68 YY 69

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008188 "neuropeptide receptor activity" evidence=IDA;IPI

GO:0007218 "neuropeptide signaling pathway" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BZ39	NMUR2_MOUSE	No assigned EC number	0.5476	0.7864	0.2050	yes	N/A
Q58CW4	NMUR2_BOVIN	No assigned EC number	0.5633	0.6699	0.1695	yes	N/A
Q9GZQ4	NMUR2_HUMAN	No assigned EC number	0.5056	0.8349	0.2072	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	103
pfam00001	251	pfam00001, 7tm_1, 7 transmembrane receptor (rhodop	0.004

>gnl|CDD|215646 pfam00001, 7tm_1, 7 transmembrane receptor (rhodopsin family)

 Score = 34.6 bits (80), Expect = 0.004
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 72  VVIINNTSLHTATNYYLFSLAVSDLTLLLL 101
           +VI+    L T TN +L +LAV+DL  LL 
Sbjct: 1   LVILRTKKLRTPTNIFLLNLAVADLLFLLT 30

This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins. Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	103
KOG4219|consensus	423		99.17
PHA03234	338	DNA packaging protein UL33; Provisional	99.08
PHA02834	323	chemokine receptor-like protein; Provisional	98.69
PHA02638	417	CC chemokine receptor-like protein; Provisional	98.66
PHA03235	409	DNA packaging protein UL33; Provisional	98.63
PHA03087	335	G protein-coupled chemokine receptor-like protein;	98.38
KOG4220|consensus	503		98.36
PF00001	257	7tm_1: 7 transmembrane receptor (rhodopsin family)	98.12
PF10320	257	7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep	97.97
KOG2087|consensus	363		95.79
PF10328	274	7TM_GPCR_Srx: Serpentine type 7TM GPCR chemorecept	95.34
PF05296	303	TAS2R: Mammalian taste receptor protein (TAS2R); I	95.33
PF10324	318	7TM_GPCR_Srw: Serpentine type 7TM GPCR chemorecept	94.83
PF05462	303	Dicty_CAR: Slime mold cyclic AMP receptor	91.94
PF10321	313	7TM_GPCR_Srt: Serpentine type 7TM GPCR chemorecept	90.9
PF10317	292	7TM_GPCR_Srd: Serpentine type 7TM GPCR chemorecept	88.79
PF11710	201	Git3: G protein-coupled glucose receptor regulatin	84.19

>KOG4219|consensus

Probab=99.17  E-value=8.5e-12  Score=91.02  Aligned_cols=60  Identities=28%  Similarity=0.431  Sum_probs=55.1

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhc
Q psy10964         43 RLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLG  102 (103)
Q Consensus        43 ~~~~~~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~~  102 (103)
                      ..|.+++.++.++|..+..++++||++|+|++..+|++|+.+|+||+|||+||++.++|+
T Consensus        29 ~lp~~~~~~wai~yg~l~~vAv~GN~iVlwIil~hrrMRtvtnyfL~NLAfADl~~s~Fn   88 (423)
T KOG4219|consen   29 VLPAWQQALWAIAYGLLVFVAVVGNLIVLWIILAHRRMRTVTNYFLVNLAFADLSMSIFN   88 (423)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhcCceEEEEEeehhehhhhHHHHHHHHHHHHHHHHHHh
Confidence            345567788999999999999999999999999999999999999999999999999886

>PHA03234 DNA packaging protein UL33; Provisional

Probab=99.08  E-value=4.1e-10  Score=81.34  Aligned_cols=53  Identities=21%  Similarity=0.221  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVI--INNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~--~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      +....++|.+++++|++||.+|+++.  .+++++|+++|+|+.|||++|+++++.
T Consensus        32 ~~~~~~~y~~vf~~gl~gN~lvl~v~~~~~~~~~rt~tn~fi~NLAvaDLL~~l~   86 (338)
T PHA03234         32 QILESAINGIMLTLIIPMIIIVICTLIIYHKVAKHNATSFYLITLFASDFLHMLC   86 (338)
T ss_pred             HHHhhHHHHHHHHHHhhhHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence            46677899999999999999999854  455667999999999999999998653

>PHA02834 chemokine receptor-like protein; Provisional

Probab=98.69  E-value=8.4e-08  Score=68.65  Aligned_cols=49  Identities=35%  Similarity=0.614  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q psy10964         50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLL   99 (103)
Q Consensus        50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~   99 (103)
                      .+..+++.+++++|++||+++++++.++++ ++++|+|+.|||++|++..
T Consensus        29 ~~~~~~~~li~v~~~~gN~lVi~vi~~~~~-~~~~n~~i~nLAiaDll~~   77 (323)
T PHA02834         29 YFVIVFYILLFIFGLIGNVLVIAVLIVKRF-MFVVDVYLFNIAMSDLMLV   77 (323)
T ss_pred             hhHHHHHHHHHHHHHhhHHHHHHHHHhccc-cchhhhhhHHHHHHHHHHH
Confidence            556788999999999999999998877555 5678999999999998763

>PHA02638 CC chemokine receptor-like protein; Provisional

Probab=98.66  E-value=1.1e-07  Score=70.53  Aligned_cols=50  Identities=36%  Similarity=0.659  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLL   99 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~   99 (103)
                      .....++|.+++++|++||.++++++. +|++|+++++++.|||++|+++.
T Consensus        98 ~~~l~~~y~lvfvlgliGN~LVl~il~-~k~lrt~t~i~llnLAisDLl~~  147 (417)
T PHA02638         98 SEYIKIFYIIIFILGLFGNAAIIMILF-CKKIKTITDIYIFNLAISDLIFV  147 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCCHhHHHHHHHHHHHHHHH
Confidence            355678899999999999999998765 47889999999999999999874

>PHA03235 DNA packaging protein UL33; Provisional

Probab=98.63  E-value=2.2e-07  Score=68.86  Aligned_cols=51  Identities=18%  Similarity=0.197  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHH
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSL--HTATNYYLFSLAVSDLTLL   99 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l--~~~~~~fl~nLa~~Dll~~   99 (103)
                      .....+++.+++++|++||+++++++.++++.  ++..++|+.|||++|++..
T Consensus        32 ~~~~~~~~~li~vvGiigN~lVL~~~~~~~r~~~~~~~~~~I~NLAvsDLl~l   84 (409)
T PHA03235         32 RTTETFINLLIISVGGPLNLIVLVTQLLANRVHGFSTPTLYMTNLYLANLLTV   84 (409)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHH
Confidence            45677889999999999999999986543332  3566789999999999863

>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional

Probab=98.38  E-value=4.2e-07  Score=64.90  Aligned_cols=51  Identities=37%  Similarity=0.632  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      +....+++.+++++|++||+++++++.++ ++|++.|+++.|||++|++.++
T Consensus        40 ~~~~~~~~~~i~~~gl~gN~lvl~~~~~~-~~~~~~~~ll~~laisDll~~~   90 (335)
T PHA03087         40 STILIVVYSTIFFFGLVGNIIVIYVLTKT-KIKTPMDIYLLNLAVSDLLFVM   90 (335)
T ss_pred             hhHHHHHHHHHHHHHHHhhHhEEeeehhc-cccCchHHHHHHHHHHHHHHHH
Confidence            45677889999999999999999988877 8899999999999999987654

>KOG4220|consensus

Probab=98.36  E-value=1.1e-08  Score=75.38  Aligned_cols=54  Identities=33%  Similarity=0.503  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhc
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLG  102 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~~  102 (103)
                      ...+.++...+.+++++||++|++.+..+++|++..|+||++||+||++.+.|+
T Consensus        30 ~v~i~~v~~~lsLVTv~GNlLVmiSfKvnrqLqTVnNYfLfSLAcADliIG~~S   83 (503)
T KOG4220|consen   30 VVFIVVVTGSLSLVTVVGNLLVMISFKVNRQLQTVNNYFLFSLACADLIIGAFS   83 (503)
T ss_pred             EEeeehhhhHHHHHhhhccEEEEEEEEecceeeeecceeehHHHHhhhhhheee
Confidence            355667889999999999999999999999999999999999999999988764

>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=98.12  E-value=3.8e-06  Score=56.12  Aligned_cols=36  Identities=44%  Similarity=0.641  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         66 GNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        66 gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ||.++++++.++|++|++.++|+.|||++|++.+++
T Consensus         1 GN~lvi~~~~~~~~~~~~~~~~l~~Lav~Dll~~~~   36 (257)
T PF00001_consen    1 GNILVILVILRSKRLRTPSNILLLNLAVADLLVGLF   36 (257)
T ss_dssp             HHHHHHHHHHHSGGG-SHHHHHHHHHHHHHHHHHHT
T ss_pred             CchhehhhhhhhccCCChhHHHHHHHHHHHHhhccc
Confidence            899999999999999999999999999999998765

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The rhodopsin-like GPCRs themselves represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].; GO: 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 2KI9_A 3QAK_A 2YDV_A 3VGA_A 3PWH_A 3RFM_A 3EML_A 3VG9_A 3REY_A 3UZA_A ....

>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=97.97  E-value=2.2e-06  Score=59.82  Aligned_cols=40  Identities=30%  Similarity=0.544  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         61 VTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        61 ~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      ++|+.||..++.++.++|++|+|+++++..+|++|++...
T Consensus         2 ~ig~~gN~~~i~~~~~~~~Lrs~~~~li~~~~~~d~~~~~   41 (257)
T PF10320_consen    2 IIGLFGNLLLIILIFRNKSLRSPCYILICILCFADLICLL   41 (257)
T ss_pred             EEEEEccHHHHHHHHhccccccchHHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999998753

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class sx (Srsx), which is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

>KOG2087|consensus

Probab=95.79  E-value=0.0024  Score=46.72  Aligned_cols=45  Identities=18%  Similarity=0.318  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         56 YFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        56 ~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      --++..+++.||.+|++.....+...++..+++.|||++|++.++
T Consensus        31 vW~i~~lAi~gN~~Vl~~~~~~~~~~~~~~~li~~la~ad~~mGi   75 (363)
T KOG2087|consen   31 VWVIALLAIVGNLLVLLTRFTSRYELNSHRFLICNLAFADLLMGI   75 (363)
T ss_pred             hhhhhhHHhccCeeeeeeeeehhhhccchHHHHHHHHHHHHHcch
Confidence            345667788999999988776666667889999999999998865

>PF10328 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemoreceptor Srx; InterPro: IPR019430 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=95.34  E-value=0.038  Score=38.62  Aligned_cols=43  Identities=26%  Similarity=0.368  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         59 IFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        59 i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      +.+.|++.|.++++.+.+.+++|++.+..-.+.|++|.+.+..
T Consensus         3 ~s~~G~~~N~~v~~~~~~~~~~~~sF~~l~~~~a~~n~i~~~~   45 (274)
T PF10328_consen    3 ISIIGIILNWLVFIIIFKLKSLRNSFGILCASQAIANIIICLI   45 (274)
T ss_pred             eeHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999988763

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class x (Srx) from the Srg superfamily [, ]. Srg receptors contain seven hydrophobic, putative transmembrane, regions and can be distinguished from other 7TM GPCR receptors by their own characteristic TM signatures.

>PF05296 TAS2R: Mammalian taste receptor protein (TAS2R); InterPro: IPR007960 This family consists of several forms of mammalian taste receptor proteins (TAS2Rs)

Probab=95.33  E-value=0.17  Score=36.27  Aligned_cols=52  Identities=23%  Similarity=0.296  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVII---NNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~---~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      +....++....+++|+.||+.++.+..   .++|.-.|.+..+.+||++.++.-.
T Consensus         6 ~~i~~~i~~~~~~~Gi~~N~FI~~vn~~~w~k~~~l~~~d~IL~~La~sr~~l~~   60 (303)
T PF05296_consen    6 EIIFLIILVVEFIIGILGNGFIVLVNCSDWVKSRKLSPSDQILTSLAISRILLQW   60 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCCCCChHHHHHHHHHHHHHHHHH
Confidence            355677888999999999999886655   3334457999999999999877543

TAS2Rs are G protein-coupled receptors expressed in subsets of taste receptor cells of the tongue and palate epithelia and are organised in the genome in clusters. The proteins are genetically linked to loci that influence bitter perception in mice and humans [].; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0050909 sensory perception of taste, 0016021 integral to membrane

>PF10324 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemoreceptor Srw; InterPro: IPR019427 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=94.83  E-value=0.043  Score=38.94  Aligned_cols=41  Identities=27%  Similarity=0.453  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHHHHHHh
Q psy10964         59 IFVTGVIGNIAVCVVIINNTSLHT-ATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        59 i~~~~~~gN~~vl~~~~~~~~l~~-~~~~fl~nLa~~Dll~~~  100 (103)
                      +.++|+++|.+-+.+.. +|.+|+ +.|.++...|++|+...+
T Consensus         6 ~~~~g~~~N~~h~~VLt-rk~mR~~~in~~l~~Iai~Dl~~~~   47 (318)
T PF10324_consen    6 LSIFGLFINIFHLIVLT-RKSMRSSSINILLIGIAICDLLYML   47 (318)
T ss_pred             EeHHHHHHHHHHhhhcC-ChhhhcCCHHHHHHHHHHHHHHHHH
Confidence            35678999999887664 567886 899999999999998765

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class w (Srw), which is a solo family amongst the superfamilies of chemoreceptors. The genes encoding Srw do not appear to be under as strong an adaptive evolutionary pressure as those of Srz [].

>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor

Probab=91.94  E-value=0.83  Score=32.96  Aligned_cols=49  Identities=14%  Similarity=0.213  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Q psy10964         51 PITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLL   99 (103)
Q Consensus        51 ~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~   99 (103)
                      .+.++......++++|-++++....+.|++|+|.+=.+.-++++|++..
T Consensus         8 ~~~~i~~~~s~lSllGclfiI~tf~~~k~~r~~~~rli~yl~~~~ll~~   56 (303)
T PF05462_consen    8 TLYAIELVASVLSLLGCLFIIITFCLFKRLRKPINRLIFYLSIANLLTN   56 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence            3455666777888999999999999999999999999889999988754

>PF10321 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemoreceptor Srt; InterPro: IPR019425 Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type []

Probab=90.90  E-value=1.3  Score=32.04  Aligned_cols=52  Identities=17%  Similarity=0.221  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      +.+.+.+....++..+-....+.++.+++..|.|.|-.+.-||+.|++...+
T Consensus        33 p~~G~~~~~~g~~~~~lY~p~~~~i~~~~~~k~~~ykiM~~L~i~Di~~l~~   84 (313)
T PF10321_consen   33 PILGIYFLIFGIIIIILYIPCLIAIFKKKLFKMSCYKIMFFLAIFDIIQLFI   84 (313)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHh
Confidence            4445555555566666777778888877777899999999999999987653

Srt is a member of the Srg superfamily of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

>PF10317 7TM_GPCR_Srd: Serpentine type 7TM GPCR chemoreceptor Srd; InterPro: IPR019421 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=88.79  E-value=0.86  Score=32.24  Aligned_cols=47  Identities=26%  Similarity=0.256  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         55 VYFGIFVTGVIGNIAVCVVIINNT-SLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        55 ~~~~i~~~~~~gN~~vl~~~~~~~-~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      .+...+..|+..|.+++..+.++. +.-+..-+++.|-|+.|++.+..
T Consensus         4 ~~~~~~~~~~~~n~~Ll~~i~~~tp~~l~~~~~~l~~~~~~~~~~~~~   51 (292)
T PF10317_consen    4 YHPIFFILGIILNILLLYLIIFKTPKSLRTYSILLLNTAIFDLISIIS   51 (292)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456778899999999988776543 43456788999999999988764

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents the chemoreceptor Srd [].

>PF11710 Git3: G protein-coupled glucose receptor regulating Gpa2; InterPro: IPR023041 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor

Probab=84.19  E-value=4.7  Score=27.25  Aligned_cols=23  Identities=13%  Similarity=0.197  Sum_probs=18.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         78 TSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        78 ~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      ++.|...+-++.||.++|++.++
T Consensus        30 ~r~~~fR~~LIl~L~~aD~~qal   52 (201)
T PF11710_consen   30 YRRRSFRHQLILNLLLADFIQAL   52 (201)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHH
Confidence            44567777799999999998775

Git3 is one of six proteins required for glucose-triggered adenylate cyclase activation, and is a G protein-coupled receptor responsible for the activation of adenylate cyclase through Gpa2 - heterotrimeric G protein alpha subunit, part of the glucose-detection pathway. Git3 contains seven predicted transmembrane domains, a third cytoplasmic loop and a cytoplasmic tail []. This is the conserved N-terminal domain of the member proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	103
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	3e-14
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	2e-13
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	2e-12
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	2e-11
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	2e-11
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	4e-11
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	7e-11
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	1e-10
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	1e-10
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	2e-10
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	2e-10
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	4e-10
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	5e-10
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	1e-09
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	4e-09

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A Length = 364

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 19  MNDSMITSYNWTVEHYLYC-MRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINN 77
           M++ +    + +                   ++     Y  I VT V+GN+ V  +I+ +
Sbjct: 1   MDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAH 60

Query: 78  TSLHTATNYYLFSLAVSDLTLLLLG 102
             + T TNY+L +LA ++ ++    
Sbjct: 61  KRMRTVTNYFLVNLAFAEASMAAFN 85

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B* Length = 502

 Score = 60.7 bits (147), Expect = 2e-12
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 15  YNCSMNDSMITSYNWTVEHYLY--------CMRGPKRLHMSVLLPITIVYFGIFVTGVIG 66
                  S+ TS N+T E            C R        + LP   +Y  IF+TG++G
Sbjct: 8   AGAPEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPT--IYSIIFLTGIVG 65

Query: 67  NIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL 100
           N  V +V+     L + T+ Y   L+V+DL  ++
Sbjct: 66  NGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI 99

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A* Length = 488

 Score = 57.8 bits (139), Expect = 2e-11
 Identities = 17/50 (34%), Positives = 29/50 (58%)

Query: 52  ITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101
              V   I V  ++GN+ VC  +  N++L   TNY++ SLA +D+ + +L
Sbjct: 24  YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVL 73

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A* Length = 500

 Score = 57.4 bits (138), Expect = 2e-11
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 20  NDSMITSYNWTVEHYLYC------MRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVV 73
           +D+M    N +                 ++     ++ + IV   I +  V GN+ V   
Sbjct: 5   DDAMGQPGNGSAFLLAPNRSHAPDHDVTQQRDEVWVVGMGIVMSLIVLAIVFGNVLVITA 64

Query: 74  IINNTSLHTATNYYLFSLAVSDLTLLLL 101
           I     L T TNY++ SLA +DL + L 
Sbjct: 65  IAKFERLQTVTNYFITSLACADLVMGLA 92

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A* Length = 464

 Score = 56.9 bits (137), Expect = 4e-11
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 37  CMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDL 96
              G   +  ++ +    +Y  + V G+ GN  V  VI+  T + TATN Y+F+LA++D 
Sbjct: 7   PQTGSPSMVTAITIMA--LYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADA 64

Query: 97  TLLL 100
               
Sbjct: 65  LATS 68

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A* Length = 467

 Score = 56.3 bits (135), Expect = 7e-11
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 19  MNDSMITSYNWTVEHYLYCMRGPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNT 78
           M+DS  +S N                    ++ I +V   + +  +IGNI V V I  N 
Sbjct: 1   MDDSTDSSDNSLAL--------TSPYKTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNR 52

Query: 79  SLHTATNYYLFSLAVSDLTLLLL 101
            L T  NY+LFSLA +DL + + 
Sbjct: 53  HLQTVNNYFLFSLACADLIIGVF 75

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, protein structure initiative, AC technologies center for gene to 3D structure; HET: ETQ MAL; 2.89A {Homo sapiens} Length = 481

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 18/50 (36%), Positives = 28/50 (56%)

Query: 52  ITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101
             + Y  + +  V GN  VC+ ++   +L T TNY + SLAV+DL +  L
Sbjct: 41  YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATL 90

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens} Length = 452

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDL 96
          L+P+ +V   I +  V  N+ V   + +   LHT  N Y+ SL+V+DL
Sbjct: 8  LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADL 55

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A Length = 447

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 17/50 (34%), Positives = 29/50 (58%)

Query: 52  ITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101
              V   I V  ++GN+ VC  +  N++L   TNY++ SLA +D+ + +L
Sbjct: 34  YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVL 83

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A* Length = 520

 Score = 54.5 bits (130), Expect = 2e-10
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 25  TSYNWTVEHYLYCMRGPKRLH-MSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTA 83
            +Y+  V HY Y  +        + +   ++V+  I    ++ NI V + I      H  
Sbjct: 38  VNYDIIVRHYNYTGKLNISADKENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRP 97

Query: 84  TNYYLFSLAVSDL 96
             Y++ +LA+SDL
Sbjct: 98  MYYFIGNLALSDL 110

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A Length = 514

 Score = 54.2 bits (130), Expect = 4e-10
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 45  HMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL 101
               ++ + IV   I +  V GN+ V   I     L T TNY++ SLA +DL + L 
Sbjct: 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLA 234

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Length = 448

 Score = 53.8 bits (129), Expect = 5e-10
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 52  ITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLG 102
           + I      + G  GN  V  +     SL T  N ++ +LA SD T  L+ 
Sbjct: 37  LGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVN 87

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ... Length = 349

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 52  ITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLG 102
           +    F + + G   N     V + +  L T  NY L +LAV+DL ++  G
Sbjct: 41  LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG 91

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A* Length = 315

 Score = 51.3 bits (123), Expect = 4e-09
 Identities = 18/62 (29%), Positives = 31/62 (50%)

Query: 40  GPKRLHMSVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLL 99
           G + L       ++++   + +  V GN+ V   I +   L T TN ++ SLA +DL + 
Sbjct: 2   GAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG 61

Query: 100 LL 101
           LL
Sbjct: 62  LL 63

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	103
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	99.3
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	99.16
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	99.15
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	99.15
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	99.14
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	99.1
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	99.05
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	99.05
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	99.03
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	99.02
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	99.02
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	99.01
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	99.0
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	98.99
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	98.98
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	98.94
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	98.93
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	98.89
2lot_A	64	Apelin receptor; membrane protein; NMR {Homo sapie	96.8

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=99.30  E-value=9.7e-12  Score=85.26  Aligned_cols=52  Identities=31%  Similarity=0.496  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      +.+..++|.+++++|++||+++++++.++|++|+|+|+|+.|||++|+++++
T Consensus        11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l   62 (296)
T 2lnl_A           11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL   62 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH
Confidence            4667788999999999999999999999999999999999999999998865

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=99.16  E-value=4.4e-11  Score=88.28  Aligned_cols=55  Identities=36%  Similarity=0.597  Sum_probs=45.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHhhc
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSL---HTATNYYLFSLAVSDLTLLLLG  102 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l---~~~~~~fl~nLa~~Dll~~~~~  102 (103)
                      .+.++.++|.+++++|++||++|++++.+++++   |+++|+|+.|||++|+++++++
T Consensus        31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~   88 (510)
T 4grv_A           31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLA   88 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence            356677899999999999999999998877654   4789999999999999987653

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=99.15  E-value=1.2e-10  Score=86.12  Aligned_cols=52  Identities=25%  Similarity=0.319  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      .+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus        64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~  115 (520)
T 3v2y_A           64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVA  115 (520)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHH
Confidence            5677899999999999999999999999999999999999999999998764

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=99.14  E-value=5e-10  Score=78.34  Aligned_cols=52  Identities=31%  Similarity=0.540  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      .+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++
T Consensus        33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~   84 (364)
T 2ks9_A           33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAF   84 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH
Confidence            4457889999999999999999999999999999999999999999998654

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=99.10  E-value=8.4e-10  Score=76.44  Aligned_cols=54  Identities=26%  Similarity=0.347  Sum_probs=48.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ...+..+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++
T Consensus        37 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~   90 (349)
T 1u19_A           37 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG   90 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHh
Confidence            345667888999999999999999999999999999999999999999998764

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=99.05  E-value=5.1e-10  Score=82.16  Aligned_cols=54  Identities=35%  Similarity=0.431  Sum_probs=49.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ......+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus        39 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~   92 (500)
T 2rh1_A           39 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLA   92 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHH
Confidence            446677889999999999999999999999999999999999999999998765

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=99.05  E-value=6.5e-10  Score=80.64  Aligned_cols=53  Identities=30%  Similarity=0.488  Sum_probs=48.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      .+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++
T Consensus        47 ~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~   99 (502)
T 3odu_A           47 NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI   99 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            45777889999999999999999999999999999999999999999999853

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=99.03  E-value=5.1e-10  Score=80.88  Aligned_cols=53  Identities=28%  Similarity=0.432  Sum_probs=48.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      .+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++
T Consensus        19 ~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~   71 (484)
T 3vw7_A           19 LTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS   71 (484)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH
Confidence            45677889999999999999999999999999999999999999999999864

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=99.02  E-value=5.7e-10  Score=80.17  Aligned_cols=53  Identities=40%  Similarity=0.554  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus        23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~   75 (467)
T 3uon_A           23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVF   75 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHH
Confidence            46677889999999999999999999999999999999999999999998764

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=99.02  E-value=3.5e-10  Score=81.65  Aligned_cols=52  Identities=35%  Similarity=0.570  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      .+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus        39 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~   90 (481)
T 3pbl_A           39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATL   90 (481)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHH
Confidence            4455778999999999999999999999999999999999999999998765

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=99.01  E-value=8.1e-10  Score=78.97  Aligned_cols=53  Identities=32%  Similarity=0.521  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus        31 ~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~   83 (447)
T 4eiy_A           31 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVL   83 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHH
Confidence            35667888999999999999999999999999999999999999999998764

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=99.00  E-value=1.6e-09  Score=77.71  Aligned_cols=52  Identities=37%  Similarity=0.543  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLL  100 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~  100 (103)
                      ..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++
T Consensus        17 ~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~   68 (464)
T 4dkl_A           17 AITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATS   68 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence            4667788999999999999999999999999999999999999999998765

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=98.99  E-value=8.3e-10  Score=79.61  Aligned_cols=53  Identities=32%  Similarity=0.521  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         49 LLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        49 ~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ..+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus        21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~   73 (488)
T 3eml_A           21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVL   73 (488)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHH
Confidence            35667889999999999999999999999999999999999999999998764

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=98.98  E-value=3.4e-09  Score=76.34  Aligned_cols=54  Identities=30%  Similarity=0.342  Sum_probs=48.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ....+.+++.+++++|++||+++++++.+++++|++.|+++.|||++|++++++
T Consensus        33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~   86 (448)
T 2z73_A           33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLV   86 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHH
Confidence            345667888999999999999999999999999999999999999999998764

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=98.94  E-value=1.6e-09  Score=73.87  Aligned_cols=54  Identities=30%  Similarity=0.329  Sum_probs=48.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      .+....+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++
T Consensus        10 ~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~   63 (315)
T 4amj_A           10 WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLL   63 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHH
Confidence            346677889999999999999999999999999999999999999999987643

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=98.93  E-value=9.1e-10  Score=78.81  Aligned_cols=52  Identities=31%  Similarity=0.429  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         50 LPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        50 ~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      .++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++
T Consensus         9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~   60 (452)
T 3rze_A            9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAV   60 (452)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHH
Confidence            4455788999999999999999999999999999999999999999998654

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=98.89  E-value=2.9e-09  Score=78.27  Aligned_cols=54  Identities=35%  Similarity=0.431  Sum_probs=48.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         48 VLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        48 ~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      ......+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++++++
T Consensus       181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~  234 (514)
T 3sn6_R          181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLA  234 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHH
Confidence            345677889999999999999999999999999999999999999999998654

>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A

Probab=96.80  E-value=6.2e-05  Score=41.39  Aligned_cols=30  Identities=23%  Similarity=0.373  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy10964         51 PITIVYFGIFVTGVIGNIAVCVVIINNTSL   80 (103)
Q Consensus        51 ~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l   80 (103)
                      +..++|.++|++|++||++++|++.++|.-
T Consensus        30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~   59 (64)
T 2lot_A           30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH   59 (64)
T ss_dssp             SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence            455789999999999999999999887753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	103
d1u19a_	348	f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId:	7e-09

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} Length = 348

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.2 bits (116), Expect = 7e-09
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 52  ITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLLG 102
           +    F + + G   N     V + +  L T  NY L +LAV+DL ++  G
Sbjct: 40  LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	103
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	99.15

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.15  E-value=1.9e-10  Score=78.29  Aligned_cols=55  Identities=25%  Similarity=0.321  Sum_probs=49.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh
Q psy10964         47 SVLLPITIVYFGIFVTGVIGNIAVCVVIINNTSLHTATNYYLFSLAVSDLTLLLL  101 (103)
Q Consensus        47 ~~~~~~~~~~~~i~~~~~~gN~~vl~~~~~~~~l~~~~~~fl~nLa~~Dll~~~~  101 (103)
                      +...++.+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++.
T Consensus        35 ~~~~~~~~~~~ii~v~gi~gN~lvi~vi~~~k~lr~~~~~~l~nLaiaDll~~~~   89 (348)
T d1u19a_          35 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG   89 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHeehhhhccCCCCCHhHHHHHHHHHHHHHHHHH
Confidence            3445677888999999999999999999999999999999999999999998765