Psyllid ID: psy10985

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MKLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Secondary Structure (PSIPRED)
ccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEEEEcccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEcHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MKLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAIcaihpvpgqhfFLWQTKLANkggelcsrwvpydvtlsLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Flexible Loop (DISEMBL)
MKLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Low Complexity Region (SEG)
MKLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Disordered region (IsUnstruct)
**LFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMR****
Disordered Region (DISOPRED)
*KLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Disordered Region (DISEMBL)
MKLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Disordered Region (DISPRO)
*KLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKLFSFRIEHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q7KVW5	927	Small conductance calcium	yes	N/A	0.844	0.152	0.865	9e-71
P58392	724	Small conductance calcium	yes	N/A	0.874	0.201	0.691	2e-54
Q9UGI6	736	Small conductance calcium	no	N/A	0.874	0.198	0.691	2e-54
P70605	732	Small conductance calcium	yes	N/A	0.874	0.199	0.691	2e-54
P58391	731	Small conductance calcium	yes	N/A	0.874	0.199	0.691	2e-54
Q9H2S1	579	Small conductance calcium	no	N/A	0.880	0.253	0.668	1e-53
P70604	580	Small conductance calcium	no	N/A	0.880	0.253	0.668	1e-53
P58390	574	Small conductance calcium	no	N/A	0.880	0.256	0.668	1e-53
P70606	536	Small conductance calcium	no	N/A	0.886	0.276	0.655	2e-53
Q9EQR3	537	Small conductance calcium	no	N/A	0.886	0.275	0.655	8e-53

>sp|Q7KVW5|KCNN_DROME Small conductance calcium-activated potassium channel protein OS=Drosophila melanogaster GN=SK PE=2 SV=2

 Score =  265 bits (678), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 122/141 (86%), Positives = 130/141 (92%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRISQI +EL ICAIHP+PG+++F W TKLANK   + +  VP
Sbjct: 547 LFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQWTTKLANKNKTIGTEMVP 606

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDV LSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 607 YDVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 666

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 667 LLVFMVSLWIIASWTLRQCER 687

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.
Drosophila melanogaster (taxid: 7227)

>sp|P58392|KCNN3_PIG Small conductance calcium-activated potassium channel protein 3 OS=Sus scrofa GN=KCNN3 PE=2 SV=1

 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 3/149 (2%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct: 330 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFS--Y 387

Query: 80  LCSRW-VPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTL 138
             SR     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTL
Sbjct: 388 TPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTL 447

Query: 139 MTICPGTVLLVFMVSLWIIASWTMRQCER 167
           MTICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 448 MTICPGTVLLVFSISLWIIAAWTVRVCER 476

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Sus scrofa (taxid: 9823)

>sp|Q9UGI6|KCNN3_HUMAN Small conductance calcium-activated potassium channel protein 3 OS=Homo sapiens GN=KCNN3 PE=2 SV=1

 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 3/149 (2%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct: 342 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFS--Y 399

Query: 80  LCSRW-VPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTL 138
             SR     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTL
Sbjct: 400 TPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTL 459

Query: 139 MTICPGTVLLVFMVSLWIIASWTMRQCER 167
           MTICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 460 MTICPGTVLLVFSISLWIIAAWTVRVCER 488

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Homo sapiens (taxid: 9606)

>sp|P70605|KCNN3_RAT Small conductance calcium-activated potassium channel protein 3 OS=Rattus norvegicus GN=Kcnn3 PE=2 SV=3

 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 3/149 (2%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct: 338 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFS--Y 395

Query: 80  LCSRW-VPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTL 138
             SR     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTL
Sbjct: 396 TPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTL 455

Query: 139 MTICPGTVLLVFMVSLWIIASWTMRQCER 167
           MTICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 456 MTICPGTVLLVFSISLWIIAAWTVRVCER 484

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Rattus norvegicus (taxid: 10116)

>sp|P58391|KCNN3_MOUSE Small conductance calcium-activated potassium channel protein 3 OS=Mus musculus GN=Kcnn3 PE=2 SV=1

 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 3/149 (2%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct: 337 YHTREVQLFVIDNGADDWRIAMTYERIFYISLEMLVCAIHPIPGEYKFFWTARLAFS--Y 394

Query: 80  LCSRW-VPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTL 138
             SR     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTL
Sbjct: 395 TPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTL 454

Query: 139 MTICPGTVLLVFMVSLWIIASWTMRQCER 167
           MTICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 455 MTICPGTVLLVFSISLWIIAAWTVRVCER 483

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Mus musculus (taxid: 10090)

>sp|Q9H2S1|KCNN2_HUMAN Small conductance calcium-activated potassium channel protein 2 OS=Homo sapiens GN=KCNN2 PE=2 SV=2

 Score =  208 bits (530), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 117/148 (79%), Gaps = 1/148 (0%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           +  R   LFM+DN ADDWRIAMT++RI  I +E+ +CAIHP+PG + F W  +LA     
Sbjct: 188 YHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAP 247

Query: 80  LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
             +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct: 248 -STTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 306

Query: 140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
           TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 307 TICPGTVLLVFSISLWIIAAWTVRACER 334

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Homo sapiens (taxid: 9606)

>sp|P70604|KCNN2_RAT Small conductance calcium-activated potassium channel protein 2 OS=Rattus norvegicus GN=Kcnn2 PE=1 SV=1

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 117/148 (79%), Gaps = 1/148 (0%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           +  R   LFM+DN ADDWRIAMT++RI  I +E+ +CAIHP+PG + F W  +LA     
Sbjct: 189 YHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAP 248

Query: 80  LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
             +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct: 249 -STTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 307

Query: 140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
           TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 308 TICPGTVLLVFSISLWIIAAWTVRACER 335

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Rattus norvegicus (taxid: 10116)

>sp|P58390|KCNN2_MOUSE Small conductance calcium-activated potassium channel protein 2 OS=Mus musculus GN=Kcnn2 PE=2 SV=1

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/148 (66%), Positives = 117/148 (79%), Gaps = 1/148 (0%)

Query: 20  FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
           +  R   LFM+DN ADDWRIAMT++RI  I +E+ +CAIHP+PG + F W  +LA     
Sbjct: 183 YHAREIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAP 242

Query: 80  LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
             +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct: 243 -STTTADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 301

Query: 140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
           TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct: 302 TICPGTVLLVFSISLWIIAAWTVRACER 329

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Mus musculus (taxid: 10090)

>sp|P70606|KCNN1_RAT Small conductance calcium-activated potassium channel protein 1 OS=Rattus norvegicus GN=Kcnn1 PE=1 SV=2

 Score =  207 bits (527), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 120/154 (77%), Gaps = 6/154 (3%)

Query: 14  LYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKL 73
           LY  +E Q     LF++DN ADDWRIAMTW+R+S IS+ELA+CAIHPVPG + F W  +L
Sbjct: 155 LYHAREIQ-----LFLVDNGADDWRIAMTWERVSLISLELAVCAIHPVPGHYRFTWTARL 209

Query: 74  ANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRF 133
           A       +     DV LS+PMFLRLYL+ RVMLLHS++FTDASSRSIGALNR+ FNTRF
Sbjct: 210 AFSLVPSAAE-ADVDVLLSIPMFLRLYLLARVMLLHSRIFTDASSRSIGALNRVTFNTRF 268

Query: 134 VLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER 167
           V KTLMTICPGTVLLVF +S WI+A+WT+R CER
Sbjct: 269 VTKTLMTICPGTVLLVFSISSWIVAAWTVRVCER 302

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Rattus norvegicus (taxid: 10116)

>sp|Q9EQR3|KCNN1_MOUSE Small conductance calcium-activated potassium channel protein 1 OS=Mus musculus GN=Kcnn1 PE=1 SV=2

 Score =  205 bits (522), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 119/154 (77%), Gaps = 6/154 (3%)

Query: 14  LYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKL 73
           LY  +E Q     LF++DN ADDWRIAMTW+R+S IS+EL +CAIHPVPG + F W  +L
Sbjct: 156 LYHAREIQ-----LFLVDNGADDWRIAMTWERVSLISLELVVCAIHPVPGHYRFTWTARL 210

Query: 74  ANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRF 133
           A       +     DV LS+PMFLRLYL+ RVMLLHS++FTDASSRSIGALNR+ FNTRF
Sbjct: 211 AFSLVPSAAE-ADLDVLLSIPMFLRLYLLARVMLLHSRIFTDASSRSIGALNRVTFNTRF 269

Query: 134 VLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER 167
           V KTLMTICPGTVLLVF VS WI+A+WT+R CER
Sbjct: 270 VTKTLMTICPGTVLLVFSVSSWIVAAWTVRVCER 303

Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
345482878	766	PREDICTED: small conductance calcium-act	0.844	0.184	0.907	7e-77
383864641	911	PREDICTED: small conductance calcium-act	0.844	0.154	0.900	8e-77
328787228	910	PREDICTED: small conductance calcium-act	0.844	0.154	0.900	3e-76
340721024	897	PREDICTED: small conductance calcium-act	0.844	0.157	0.886	5e-74
380016554	497	PREDICTED: small conductance calcium-act	0.844	0.283	0.900	2e-72
242013116	585	Small conductance calcium-activated pota	0.844	0.241	0.900	3e-72
332018685	454	Small conductance calcium-activated pota	0.832	0.306	0.906	4e-72
442615206	979	small conductance calcium-activated pota	0.898	0.153	0.823	1e-71
328706604	666	PREDICTED: small conductance calcium-act	0.844	0.211	0.879	3e-71
195046532	994	GH24618 [Drosophila grimshawi] gi|193893	0.844	0.141	0.865	3e-71

>gi|345482878|ref|XP_001603381.2| PREDICTED: small conductance calcium-activated potassium channel protein-like [Nasonia vitripennis]

 Score =  291 bits (744), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 128/141 (90%), Positives = 139/141 (98%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI+QIS+ELAICA+HP+PG+++FLW TKLANKGG++ S+WVP
Sbjct: 255 LFMIDNCADDWRIAMTWQRITQISLELAICAVHPIPGEYYFLWTTKLANKGGDIGSKWVP 314

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 315 YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 374

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 375 LLVFMVSLWIIASWTLRQCER 395

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864641|ref|XP_003707786.1| PREDICTED: small conductance calcium-activated potassium channel protein-like [Megachile rotundata]

 Score =  291 bits (744), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 127/141 (90%), Positives = 136/141 (96%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI+QIS+EL ICAIHP+PG+++FLW TKLANKGG+  S+WVP
Sbjct: 427 LFMIDNCADDWRIAMTWQRIAQISLELVICAIHPIPGEYYFLWTTKLANKGGDFGSKWVP 486

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDVTLSLPMF RLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 487 YDVTLSLPMFFRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 546

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 547 LLVFMVSLWIIASWTLRQCER 567

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787228|ref|XP_393798.4| PREDICTED: small conductance calcium-activated potassium channel protein [Apis mellifera]

 Score =  289 bits (739), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 127/141 (90%), Positives = 135/141 (95%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI+QIS+EL ICAIHP+PG+++FLW TKLANKGG+  S WVP
Sbjct: 419 LFMIDNCADDWRIAMTWQRIAQISLELLICAIHPIPGEYYFLWTTKLANKGGDFGSTWVP 478

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDVTLSLPMF RLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 479 YDVTLSLPMFFRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 538

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 539 LLVFMVSLWIIASWTLRQCER 559

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721024|ref|XP_003398927.1| PREDICTED: small conductance calcium-activated potassium channel protein-like [Bombus terrestris]

 Score =  281 bits (720), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 125/141 (88%), Positives = 132/141 (93%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI+QIS+EL ICAIHP+P + +FLW TKLANKGG + S WVP
Sbjct: 415 LFMIDNCADDWRIAMTWQRIAQISLELLICAIHPIPREDYFLWTTKLANKGGNIGSTWVP 474

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDV LSLPMF RLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 475 YDVILSLPMFFRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 534

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 535 LLVFMVSLWIIASWTLRQCER 555

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016554|ref|XP_003692247.1| PREDICTED: small conductance calcium-activated potassium channel protein-like [Apis florea]

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/141 (90%), Positives = 135/141 (95%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI+QIS+EL ICAIHP+PG+++FLW TKLANKGG+  S WVP
Sbjct: 10  LFMIDNCADDWRIAMTWQRIAQISLELLICAIHPIPGEYYFLWTTKLANKGGDFGSTWVP 69

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDVTLSLPMF RLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 70  YDVTLSLPMFFRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 129

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 130 LLVFMVSLWIIASWTLRQCER 150

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013116|ref|XP_002427261.1| Small conductance calcium-activated potassium channel protein, putative [Pediculus humanus corporis] gi|212511594|gb|EEB14523.1| Small conductance calcium-activated potassium channel protein, putative [Pediculus humanus corporis]

 Score =  276 bits (705), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/141 (90%), Positives = 135/141 (95%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI QIS+EL ICA+HP+PGQ++FLW TKLANKGG++ SRWVP
Sbjct: 149 LFMIDNCADDWRIAMTWQRIFQISIELIICAVHPIPGQYYFLWTTKLANKGGDIGSRWVP 208

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDVTLSLPMF RLYLICRVMLLHSKLFTDASSRSIGALNRI FNTRFVLKTLMTICPGTV
Sbjct: 209 YDVTLSLPMFFRLYLICRVMLLHSKLFTDASSRSIGALNRITFNTRFVLKTLMTICPGTV 268

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 269 LLVFMVSLWIIASWTLRQCER 289

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018685|gb|EGI59257.1| Small conductance calcium-activated potassium channel protein [Acromyrmex echinatior]

 Score =  275 bits (704), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/139 (90%), Positives = 136/139 (97%)

Query: 29  MIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYD 88
           MIDNCADDWRIAMTWQRI+QIS+ELAICAIHP+PG+++FLW TKLANK G++ S+WVPYD
Sbjct: 1   MIDNCADDWRIAMTWQRIAQISVELAICAIHPIPGEYYFLWTTKLANKNGDIGSKWVPYD 60

Query: 89  VTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLL 148
           VTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLL
Sbjct: 61  VTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLL 120

Query: 149 VFMVSLWIIASWTMRQCER 167
           VFMVSLWIIASWT+RQCER
Sbjct: 121 VFMVSLWIIASWTLRQCER 139

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442615206|ref|NP_001259252.1| small conductance calcium-activated potassium channel, isoform P [Drosophila melanogaster] gi|440216448|gb|AGB95098.1| small conductance calcium-activated potassium channel, isoform P [Drosophila melanogaster]

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 126/153 (82%), Positives = 134/153 (87%), Gaps = 3/153 (1%)

Query: 15  YVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLA 74
           Y   E Q R   LFMIDNCADDWRIAMTWQRISQI +EL ICAIHP+PG+++F W TKLA
Sbjct: 537 YHALEVQVR---LFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQWTTKLA 593

Query: 75  NKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFV 134
           NK   + +  VPYDV LSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFV
Sbjct: 594 NKNKTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFV 653

Query: 135 LKTLMTICPGTVLLVFMVSLWIIASWTMRQCER 167
           LKTLMTICPGTVLLVFMVSLWIIASWT+RQCER
Sbjct: 654 LKTLMTICPGTVLLVFMVSLWIIASWTLRQCER 686

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706604|ref|XP_001945703.2| PREDICTED: small conductance calcium-activated potassium channel protein-like [Acyrthosiphon pisum]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 124/141 (87%), Positives = 134/141 (95%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRI+ I+MEL ICAIHP+PG+++F W+TKLANK G+L +RWVP
Sbjct: 166 LFMIDNCADDWRIAMTWQRIATITMELVICAIHPIPGEYYFEWKTKLANKHGKLETRWVP 225

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDV LSLPMF RLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 226 YDVPLSLPMFFRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 285

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 286 LLVFMVSLWIIASWTLRQCER 306

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195046532|ref|XP_001992174.1| GH24618 [Drosophila grimshawi] gi|193893015|gb|EDV91881.1| GH24618 [Drosophila grimshawi]

 Score =  272 bits (695), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 122/141 (86%), Positives = 130/141 (92%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
           LFMIDNCADDWRIAMTWQRISQI +EL ICAIHP+PG+++F W TKLANK   + +  VP
Sbjct: 558 LFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQWTTKLANKNKTIGTEMVP 617

Query: 87  YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
           YDV LSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct: 618 YDVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 677

Query: 147 LLVFMVSLWIIASWTMRQCER 167
           LLVFMVSLWIIASWT+RQCER
Sbjct: 678 LLVFMVSLWIIASWTLRQCER 698

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
FB|FBgn0029761	927	SK "small conductance calcium-	0.844	0.152	0.865	4.4e-64
UNIPROTKB|E2RQI5	709	KCNN3 "Uncharacterized protein	0.880	0.207	0.682	8.3e-51
UNIPROTKB|E1BHB0	721	KCNN3 "Uncharacterized protein	0.880	0.203	0.682	1.1e-50
UNIPROTKB|Q86VF9	418	KCNN3 "Small conductance calci	0.880	0.351	0.682	1.1e-50
UNIPROTKB|Q9UGI6	736	KCNN3 "Small conductance calci	0.880	0.199	0.682	1.1e-50
UNIPROTKB|P58392	724	KCNN3 "Small conductance calci	0.880	0.203	0.682	1.1e-50
MGI|MGI:2153183	731	Kcnn3 "potassium intermediate/	0.880	0.201	0.682	1.1e-50
RGD|2964	732	Kcnn3 "potassium intermediate/	0.880	0.200	0.682	1.1e-50
UNIPROTKB|G3V8S7	731	Kcnn3 "Small conductance calci	0.880	0.201	0.682	1.1e-50
UNIPROTKB|F1LR91	428	LOC100360811 "Protein LOC10036	0.850	0.331	0.685	2.2e-50

FB|FBgn0029761 SK "small conductance calcium-activated potassium channel" [Drosophila melanogaster (taxid:7227)]

 Score = 654 (235.3 bits), Expect = 4.4e-64, P = 4.4e-64
 Identities = 122/141 (86%), Positives = 130/141 (92%)

Query:    27 LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVP 86
             LFMIDNCADDWRIAMTWQRISQI +EL ICAIHP+PG+++F W TKLANK   + +  VP
Sbjct:   547 LFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQWTTKLANKNKTIGTEMVP 606

Query:    87 YDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 146
             YDV LSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV
Sbjct:   607 YDVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTV 666

Query:   147 LLVFMVSLWIIASWTMRQCER 167
             LLVFMVSLWIIASWT+RQCER
Sbjct:   667 LLVFMVSLWIIASWTLRQCER 687

GO:0015269 "calcium-activated potassium channel activity" evidence=ISS

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=ISS;IDA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0006813 "potassium ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0016057 "regulation of membrane potential in photoreceptor cell" evidence=IDA

GO:0009881 "photoreceptor activity" evidence=IDA

UNIPROTKB|E2RQI5 KCNN3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   317 YHTREVQLFVIDNGADDWRIAMTYERILHISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 376

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   377 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 435

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   436 TICPGTVLLVFSISLWIIAAWTVRVCER 463

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

UNIPROTKB|E1BHB0 KCNN3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   327 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 386

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   387 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 445

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   446 TICPGTVLLVFSISLWIIAAWTVRVCER 473

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

UNIPROTKB|Q86VF9 KCNN3 "Small conductance calcium-activated potassium channel protein 3" [Homo sapiens (taxid:9606)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:    24 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 83

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:    84 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 142

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   143 TICPGTVLLVFSISLWIIAAWTVRVCER 170

GO:0005516 "calmodulin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|Q9UGI6 KCNN3 "Small conductance calcium-activated potassium channel protein 3" [Homo sapiens (taxid:9606)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   342 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 401

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   402 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 460

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   461 TICPGTVLLVFSISLWIIAAWTVRVCER 488

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

UNIPROTKB|P58392 KCNN3 "Small conductance calcium-activated potassium channel protein 3" [Sus scrofa (taxid:9823)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   330 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 389

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   390 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 448

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   449 TICPGTVLLVFSISLWIIAAWTVRVCER 476

GO:0016021 "integral to membrane" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

MGI|MGI:2153183 Kcnn3 "potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3" [Mus musculus (taxid:10090)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   337 YHTREVQLFVIDNGADDWRIAMTYERIFYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 396

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   397 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 455

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   456 TICPGTVLLVFSISLWIIAAWTVRVCER 483

GO:0005216 "ion channel activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=ISO

GO:0015269 "calcium-activated potassium channel activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=ISO

GO:0030175 "filopodium" evidence=ISO

GO:0031594 "neuromuscular junction" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

GO:0044297 "cell body" evidence=ISO

GO:0046982 "protein heterodimerization activity" evidence=ISO

RGD|2964 Kcnn3 "potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3" [Rattus norvegicus (taxid:10116)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   338 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 397

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   398 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 456

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   457 TICPGTVLLVFSISLWIIAAWTVRVCER 484

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006813 "potassium ion transport" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IMP

GO:0030175 "filopodium" evidence=IDA

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0044297 "cell body" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IMP

UNIPROTKB|G3V8S7 Kcnn3 "Small conductance calcium-activated potassium channel protein 3" [Rattus norvegicus (taxid:10116)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/148 (68%), Positives = 120/148 (81%)

Query:    20 FQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGE 79
             + TR   LF+IDN ADDWRIAMT++RI  IS+E+ +CAIHP+PG++ F W  +LA     
Sbjct:   337 YHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTP 396

Query:    80 LCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLM 139
               +     D+ LS+PMFLRLYLI RVMLLHSKLFTDASSRSIGALN+INFNTRFV+KTLM
Sbjct:   397 SRAE-ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM 455

Query:   140 TICPGTVLLVFMVSLWIIASWTMRQCER 167
             TICPGTVLLVF +SLWIIA+WT+R CER
Sbjct:   456 TICPGTVLLVFSISLWIIAAWTVRVCER 483

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

UNIPROTKB|F1LR91 LOC100360811 "Protein LOC100360811" [Rattus norvegicus (taxid:10116)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 98/143 (68%), Positives = 117/143 (81%)

Query:    25 KLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRW 84
             +LLF++DN ADDWRIAMTW+R+S IS+ELA+CAIHPVPG + F W  +LA       +  
Sbjct:   162 RLLFLVDNGADDWRIAMTWERVSLISLELAVCAIHPVPGHYRFTWTARLAFSLVPSAAE- 220

Query:    85 VPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPG 144
                DV LS+PMFLRLYL+ RVMLLHS++FTDASSRSIGALNR+ FNTRFV KTLMTICPG
Sbjct:   221 ADVDVLLSIPMFLRLYLLARVMLLHSRIFTDASSRSIGALNRVTFNTRFVTKTLMTICPG 280

Query:   145 TVLLVFMVSLWIIASWTMRQCER 167
             TVLLVF +S WI+A+WT+R CER
Sbjct:   281 TVLLVFSISSWIVAAWTVRVCER 303

GO:0005516 "calmodulin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016286 "small conductance calcium-activated potassium channel activity" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P70605	KCNN3_RAT	No assigned EC number	0.6912	0.8742	0.1994	yes	N/A
P58392	KCNN3_PIG	No assigned EC number	0.6912	0.8742	0.2016	yes	N/A
P58391	KCNN3_MOUSE	No assigned EC number	0.6912	0.8742	0.1997	yes	N/A
Q7KVW5	KCNN_DROME	No assigned EC number	0.8652	0.8443	0.1521	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	167
pfam03530	120	pfam03530, SK_channel, Calcium-activated SK potass	2e-19

>gnl|CDD|146263 pfam03530, SK_channel, Calcium-activated SK potassium channel

 Score = 78.1 bits (193), Expect = 2e-19
 Identities = 29/44 (65%), Positives = 36/44 (81%)

Query: 27  LFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQ 70
           LFMIDN ADDWRIAMT++R+ QI +EL +CAIHP+PG + F W 
Sbjct: 77  LFMIDNGADDWRIAMTFRRVLQILLELLVCAIHPIPGTYIFSWT 120

Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
KOG3684|consensus	489		100.0
PF03530	119	SK_channel: Calcium-activated SK potassium channel	99.95
KOG3684|consensus	489		98.77

>KOG3684|consensus

Probab=100.00  E-value=4.2e-67  Score=472.90  Aligned_cols=165  Identities=62%  Similarity=0.999  Sum_probs=156.2

Q ss_pred             cchhhhHHHHH------HHHHHHHhhhhheeeeccccCccchhHHHhHHHHHHHHHHHhheeeccCC--Cccceeeeeec
Q psy10985          2 KLFSFRIEHLC------NLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVP--GQHFFLWQTKL   73 (167)
Q Consensus         2 ~~~~~~~~~~~------lL~~ii~yH~~eiqLf~~dn~~~DWRia~t~~ri~~i~lEl~VCaIHP~P--g~~~f~w~~~~   73 (167)
                      +.|||+++|++      +|++|++||++||||||+|||+||||||||+||++|+.+|++||+|||+|  |.+.+.|+.++
T Consensus       105 s~~s~~Lk~~i~~ST~~LL~~ii~yHa~eIqLfmidngaddWrva~t~er~~~i~lE~~vC~i~P~P~~g~~~~~~~~~~  184 (489)
T KOG3684|consen  105 SLYSFALKCLISISTIALLGLIIAYHAIEIQLFMVDNGADDWRVAMTTERVLQILLELLVCAICPIPETGEYKWTWLAPL  184 (489)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCceeeEeccch
Confidence            57888877665      99999999999999999999999999999999999999999999999999  67777888999


Q ss_pred             cccCCCCccccccchhhhhHHHHHHHHHHHHHHhhhhhcccCccccccccccccccchHHHHHHhhhcCCchhHHHHHHH
Q psy10985         74 ANKGGELCSRWVPYDVTLSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVS  153 (167)
Q Consensus        74 ~~~~~~~~~~~~~~dvlLSlpMFlRlYLi~R~mllhS~~f~dassRsIgaLN~v~fn~rFv~Ktlm~~~P~~vLl~f~~~  153 (167)
                      +++..+...+ +|+||+||+|||||+||+||+|++|||+|+|||+|||||||+|+||+|||+||+|++|||+||++|+++
T Consensus       185 ~~~~~~~~~~-~~vdV~LSipMfLRlyLv~R~MlLhSk~f~DastRSIaaLNrI~fn~rFV~Kt~M~~~Pg~vL~vftl~  263 (489)
T KOG3684|consen  185 AFSYTPSRVD-VPVDVLLSIPMFLRLYLVCRVMLLHSKQFQDASTRSIAALNRINFNFRFVLKTLMTICPGTVLLVFTLS  263 (489)
T ss_pred             hhccCCCccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchhhhhhhHHHHHHhCchHHHHHHHHH
Confidence            9886665544 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhcC
Q psy10985        154 LWIIASWTMRQCER  167 (167)
Q Consensus       154 ~Wii~sW~lrvcER  167 (167)
                      +|+++||++|+|||
T Consensus       264 ~Wii~sW~~~~cER  277 (489)
T KOG3684|consen  264 LWIIASWMLRQCER  277 (489)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999998

>PF03530 SK_channel: Calcium-activated SK potassium channel; InterPro: IPR011996 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=99.95  E-value=2.4e-29  Score=194.00  Aligned_cols=69  Identities=48%  Similarity=0.947  Sum_probs=63.8

Q ss_pred             cchhhhH------HHHHHHHHHHHhhhhheeeeccccCccchhHHHhHHHHHHHHHHHhheeeccCCCccceeee
Q psy10985          2 KLFSFRI------EHLCNLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQ   70 (167)
Q Consensus         2 ~~~~~~~------~~~~lL~~ii~yH~~eiqLf~~dn~~~DWRia~t~~ri~~i~lEl~VCaIHP~Pg~~~f~w~   70 (167)
                      +.||+++      ||.+||++|++||++|+|+|++|||+||||+|||++|+.++++|++||||||+||.+.|.||
T Consensus        45 s~~sl~Lk~lis~ST~~Ll~lii~yH~~eiqlf~~dn~~~dWria~t~~r~~~i~lEl~vCaihP~Pg~~~~~w~  119 (119)
T PF03530_consen   45 SMYSLALKCLISLSTIILLGLIIAYHAREIQLFMVDNGADDWRIAMTWERILQIALELLVCAIHPFPGVYHFFWT  119 (119)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHheecCCCceEEeeeC
Confidence            4566665      45669999999999999999999999999999999999999999999999999999999996

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Ca2+-activated K+ channels are a diverse group of channels that are activated by an increase in intracellular Ca2+ concentration. They are found in the majority of nerve cells, where they modulate cell excitability and action potential. Three types of Ca2+-activated K+ channel have been characterised, termed small-conductance (SK), intermediate conductance (IK) and large conductance (BK) respectively []. SK channels are thought to play an important role in the functioning of all excitable tissues. To date, 3 subtypes (designated SK1-SK3) have been cloned, each of which possesses a different tissue expression profile: SK1 channels are expressed in the heart; SK2 channels are found in the adrenal gland; and SK3 channels are known to be present in skeletal muscle []. SK channels have a single-channel conductance of 2-20 pS and are activated by rises in cytosolic calcium with half maximal activation in the 400-800 nM range [, ]. Unlike BK channels, they are voltage insensitive and unaffected by low concentrations of TEA, charybdotoxin, or iberiotoxin. However, they are potently blocked by the bee venom apamin [, ], tubocurarine, and quaternary salts of bicuculline [, ]. A new series of compounds that block SK channels include dequalinium Synonym(s): SK Channel This entry represents a conserved region, found in proteins of SK channels family.

>KOG3684|consensus

Probab=98.77  E-value=1.7e-09  Score=99.40  Aligned_cols=147  Identities=5%  Similarity=-0.083  Sum_probs=133.7

Q ss_pred             HHHHHHHhhhhheeeeccccCccchhHHHhHHHHHHHHHHHhheeeccCCCccceeeeeeccccCCCCccccccchhhhh
Q psy10985         13 NLYVCQEFQTRTKLLFMIDNCADDWRIAMTWQRISQISMELAICAIHPVPGQHFFLWQTKLANKGGELCSRWVPYDVTLS   92 (167)
Q Consensus        13 lL~~ii~yH~~eiqLf~~dn~~~DWRia~t~~ri~~i~lEl~VCaIHP~Pg~~~f~w~~~~~~~~~~~~~~~~~~dvlLS   92 (167)
                      .|++|-.+|.-+.+.+..|+.+++|+..+.|.+.=+.-.+...|.++|.|+...     .......|  .+ +.+++...
T Consensus       135 qLfmidngaddWrva~t~er~~~i~lE~~vC~i~P~P~~g~~~~~~~~~~~~~~-----~~~~~~~~--vd-V~LSipMf  206 (489)
T KOG3684|consen  135 QLFMVDNGADDWRVAMTTERVLQILLELLVCAICPIPETGEYKWTWLAPLAFSY-----TPSRVDVP--VD-VLLSIPMF  206 (489)
T ss_pred             hhhhhhccchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCceeeEeccchhhcc-----CCCcccch--hH-HHHHHHHH
Confidence            566889999999999999999999999999999988888999999999999761     22222333  33 88999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhcccCccccccccccccccchHHHHHHhhhcCCchhHHHHHHHHHHHHHHhhhhhcC
Q psy10985         93 LPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTMRQCER  167 (167)
Q Consensus        93 lpMFlRlYLi~R~mllhS~~f~dassRsIgaLN~v~fn~rFv~Ktlm~~~P~~vLl~f~~~~Wii~sW~lrvcER  167 (167)
                      ++|+++.+..++.+.+|++-++++.++.++..++.+|..++.|++-+.++|+.+.++|-++.|.++.|.-|+|++
T Consensus       207 LRlyLv~R~MlLhSk~f~DastRSIaaLNrI~fn~rFV~Kt~M~~~Pg~vL~vftl~~Wii~sW~~~~cER~~~~  281 (489)
T KOG3684|consen  207 LRLYLVCRVMLLHSKQFQDASTRSIAALNRINFNFRFVLKTLMTICPGTVLLVFTLSLWIIASWMLRQCERYHDS  281 (489)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchhhhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00