Psyllid ID: psy11040

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
MKISAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMIDSGLSPSGSLVSILQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
ccccccccccccHHHHHHHHcccccccccEEEEEccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccEEEccccEEcccccccccEEEEcccccccEEEEEccccccccccccccccccccccccccEEEEEEEEccccccccccccccccHHHEEEEEEccccccccccEEEEEcccccccccccccEEEEEEEEccccccccccccccccccccccccHHHHHHHccccccEEEEEEEEEEcccHHHHHHHHcc
ccccccccccccHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHccccccHHHHHHHcccccccEEEEcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccEccccccccccEEEEEEcccEEEccccEEcccccccccEEEEccccccEEEEEEEcccHHHcEEEEcccccccccccccEEEEEEEEEcccccccccccEcccHHHEEEEEEEEEEcccHHHcEEEEcccccccccccccEEEEEEEEEcccccccccccEccccccccccccHHHHHHHcccccccEEEEEEEcccccHHHHHHHHcc
mkisaegrlgfstqnfadkyklgspvagnfylaqyddyvpilhrqfmpvlvdHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHidvpqyfdvlSQTTYIIIDVLEEMidsglspsgsLVSILQRLARRIKSEQESVRDLLELQGALqmivypnnskvslgneltptsvkdeptvtwdaepagtytlimsgsdihsGKVLAEYigsgpplgtgLHRYIFYVFkqsgyidftepyssntvkGFLHWLVVNIQGSDIHSGKVLAEYigsgpplgtgLHRYIFYVFkqtgyidftepyssntsaegrlgfstqnfadkyklgspvagnfylaqydnyvpilhrqfmp
mkisaegrlgfstqnfADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHidvpqyfdvLSQTTYIIIDVLEEMIDSGLSPSGSLVSILQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKVSLGNeltptsvkdeptvtwDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
MKISAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMIDSGLSPSGSLVSILQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
************TQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMIDSGLSPSGSLVSILQRLARRI******VRDLLELQGALQMIVYPNNSKV***************TVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSS****EGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHR****
**********FSTQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLV***********GLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMID*******************IKSEQESVRDLLELQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYID****Y*****AEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
MKISAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMIDSGLSPSGSLVSILQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
*********GFSTQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMIDSGLSPSGSLVSILQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
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MKISAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDDYVPILHRQFMPVLVDHQSTYKQQRKGLHRAVIGLDEKFTKKLVAFIAKHIDVPQYFDVLSQTTYIIIDVLEEMIDSGLSPSGSLVSIxxxxxxxxxxxxxxxxxxxxxQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFMP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query346 2.2.26 [Sep-21-2011]
O16264221 Phosphatidylethanolamine- yes N/A 0.528 0.828 0.394 6e-35
P54186152 Protein D1 (Fragment) OS= N/A N/A 0.395 0.901 0.419 4e-30
P31729197 OV-16 antigen OS=Onchocer N/A N/A 0.395 0.695 0.414 2e-29
P54188134 Protein D3 (Fragment) OS= N/A N/A 0.384 0.992 0.412 5e-28
P13696187 Phosphatidylethanolamine- yes N/A 0.421 0.780 0.383 6e-28
Q3YIX4187 Phosphatidylethanolamine- yes N/A 0.421 0.780 0.383 9e-28
Q8VIN1187 Phosphatidylethanolamine- yes N/A 0.491 0.909 0.354 3e-27
Q8MK67187 Phosphatidylethanolamine- yes N/A 0.416 0.770 0.382 7e-27
P48737187 Phosphatidylethanolamine- N/A N/A 0.450 0.834 0.364 8e-27
P70296187 Phosphatidylethanolamine- yes N/A 0.421 0.780 0.367 1e-26
>sp|O16264|PEBPH_CAEEL Phosphatidylethanolamine-binding protein homolog F40A3.3 OS=Caenorhabditis elegans GN=F40A3.3 PE=3 SV=1 Back     alignment and function desciption
 Score =  148 bits (373), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 40/223 (17%)

Query: 125 LQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKV--SLGNELTPTSVKDEPTVTWDAE 182
           L  +A    ++ E + D+L      +++    NS V  +LGN LTPT VKD P V WDAE
Sbjct: 34  LATMAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAE 93

Query: 183 PAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVK 242
           P   YTLI +  D  S K                                 EP    T +
Sbjct: 94  PGALYTLIKTDPDAPSRK---------------------------------EP----TYR 116

Query: 243 GFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYS-SNT 301
            + HWLVVNI G+DI  G  L+EYIG+GPP  TGLHRY++ ++KQ+G I+  E    +NT
Sbjct: 117 EWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLIYKQSGRIEDAEHGRLTNT 176

Query: 302 SAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQF 344
           S + R G+   +F  K+KLG+PV GN + A+YD+YVPIL++Q 
Sbjct: 177 SGDKRGGWKAADFVAKHKLGAPVFGNLFQAEYDDYVPILNKQL 219

Caenorhabditis elegans (taxid: 6239)
>sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 Back     alignment and function description
>sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 Back     alignment and function description
>sp|P54188|D3_ONCVO Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1 Back     alignment and function description
>sp|P13696|PEBP1_BOVIN Phosphatidylethanolamine-binding protein 1 OS=Bos taurus GN=PEBP1 PE=1 SV=2 Back     alignment and function description
>sp|Q3YIX4|PEBP1_CANFA Phosphatidylethanolamine-binding protein 1 OS=Canis familiaris GN=PEBP1 PE=1 SV=1 Back     alignment and function description
>sp|Q8VIN1|PEBP2_MOUSE Phosphatidylethanolamine-binding protein 2 OS=Mus musculus GN=Pbp2 PE=1 SV=1 Back     alignment and function description
>sp|Q8MK67|PEBP1_RABIT Phosphatidylethanolamine-binding protein 1 OS=Oryctolagus cuniculus GN=PEBP1 PE=2 SV=1 Back     alignment and function description
>sp|P48737|PEBP1_MACFA Phosphatidylethanolamine-binding protein 1 OS=Macaca fascicularis GN=PEBP1 PE=2 SV=2 Back     alignment and function description
>sp|P70296|PEBP1_MOUSE Phosphatidylethanolamine-binding protein 1 OS=Mus musculus GN=Pebp1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
153792114195 phosphatidylethanolamine binding protein 0.540 0.958 0.410 1e-40
290563478185 phosphatidylethanolamine binding protein 0.528 0.989 0.413 3e-40
239789025222 ACYPI002878 [Acyrthosiphon pisum] 0.601 0.936 0.389 6e-40
240848795178 phosphatidylethanolamine-binding protein 0.5 0.971 0.436 2e-39
170047779212 OV-16 antigen [Culex quinquefasciatus] g 0.569 0.929 0.406 9e-39
389610847211 phosphatidylethanolamine-binding protein 0.502 0.824 0.424 2e-38
157133196211 phosphatidylethanolamine-binding protein 0.554 0.909 0.406 2e-38
194899027202 GG13347 [Drosophila erecta] gi|190650767 0.546 0.935 0.400 3e-38
158299558206 AGAP008909-PA [Anopheles gambiae str. PE 0.450 0.757 0.440 3e-38
312378280178 hypothetical protein AND_10209 [Anophele 0.5 0.971 0.426 6e-38
>gi|153792114|ref|NP_001093267.1| phosphatidylethanolamine binding protein isoform 2 [Bombyx mori] gi|95102826|gb|ABF51354.1| phosphatidylethanolamine binding protein isoform 2 [Bombyx mori] Back     alignment and taxonomy information
 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 37/224 (16%)

Query: 121 LVSILQRLARRIKSEQESVRDLLELQGALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWD 180
           L   +  +A+  ++ Q     + +   AL  + YP+  +V  GNELTPT VKDEP+V WD
Sbjct: 7   LTRAMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWD 66

Query: 181 AEPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNT 240
           AEP   YTL M+  D  S K                                 EP    T
Sbjct: 67  AEPGQYYTLAMTDPDAPSRK---------------------------------EP----T 89

Query: 241 VKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSN 300
            + + HWLV NIQG++++SG+ L++Y+GSGPP  TGLHRY+F ++KQ   + F EP  +N
Sbjct: 90  FREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTN 149

Query: 301 TSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQF 344
           TS++ R  F    FA KY LG P+AGNFY AQYD+YVPIL++Q 
Sbjct: 150 TSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 193

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|290563478|ref|NP_001166821.1| phosphatidylethanolamine binding protein isoform 1 [Bombyx mori] gi|95102824|gb|ABF51353.1| phosphatidylethanolamine binding protein isoform 1 [Bombyx mori] Back     alignment and taxonomy information
>gi|239789025|dbj|BAH71162.1| ACYPI002878 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|240848795|ref|NP_001155500.1| phosphatidylethanolamine-binding protein-like [Acyrthosiphon pisum] gi|239789027|dbj|BAH71163.1| ACYPI002878 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|170047779|ref|XP_001851387.1| OV-16 antigen [Culex quinquefasciatus] gi|167870074|gb|EDS33457.1| OV-16 antigen [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|389610847|dbj|BAM19034.1| phosphatidylethanolamine-binding protein [Papilio polytes] Back     alignment and taxonomy information
>gi|157133196|ref|XP_001662795.1| phosphatidylethanolamine-binding protein [Aedes aegypti] gi|108870917|gb|EAT35142.1| AAEL012666-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|194899027|ref|XP_001979064.1| GG13347 [Drosophila erecta] gi|190650767|gb|EDV48022.1| GG13347 [Drosophila erecta] Back     alignment and taxonomy information
>gi|158299558|ref|XP_319656.4| AGAP008909-PA [Anopheles gambiae str. PEST] gi|157013575|gb|EAA14862.4| AGAP008909-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312378280|gb|EFR24901.1| hypothetical protein AND_10209 [Anopheles darlingi] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
FB|FBgn0037433202 CG17919 [Drosophila melanogast 0.289 0.495 0.55 4.6e-40
FB|FBgn0037432187 CG10298 [Drosophila melanogast 0.283 0.524 0.571 3.2e-39
WB|WBGene00018218221 F40A3.3b [Caenorhabditis elega 0.300 0.470 0.514 3.1e-37
FB|FBgn0032453257 CG6180 [Drosophila melanogaste 0.283 0.381 0.540 2.2e-36
RGD|621707187 Pbp2 "phosphatidylethanolamine 0.283 0.524 0.520 1.3e-32
FB|FBgn0038972179 CG7054 [Drosophila melanogaste 0.280 0.541 0.54 1.6e-32
UNIPROTKB|P13696187 PEBP1 "Phosphatidylethanolamin 0.283 0.524 0.520 2.1e-32
UNIPROTKB|Q3YIX4187 PEBP1 "Phosphatidylethanolamin 0.283 0.524 0.530 3.4e-32
MGI|MGI:1923650187 Pbp2 "phosphatidylethanolamine 0.283 0.524 0.520 1.4e-31
MGI|MGI:1344408187 Pebp1 "phosphatidylethanolamin 0.283 0.524 0.520 3.8e-31
FB|FBgn0037433 CG17919 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 308 (113.5 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 55/100 (55%), Positives = 74/100 (74%)

Query:   244 FLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSA 303
             F HW++ NI G+D+ SG+ +AEYIGSGPP GTGLHRY+F ++KQ+G ++F E   S  S 
Sbjct:    99 FKHWILANIAGNDLASGEPIAEYIGSGPPQGTGLHRYVFLLYKQSGKLEFDEERVSKRSR 158

Query:   304 EGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQ 343
             + R  FS   FA  ++LG+P+AG FY AQYD+YVP LH+Q
Sbjct:   159 KDRPKFSAAKFAINHELGNPIAGTFYQAQYDDYVPKLHKQ 198
GO:0008429 "phosphatidylethanolamine binding" evidence=ISS
GO:0005615 "extracellular space" evidence=IDA
GO:0032504 "multicellular organism reproduction" evidence=IEP
FB|FBgn0037432 CG10298 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00018218 F40A3.3b [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0032453 CG6180 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|621707 Pbp2 "phosphatidylethanolamine binding protein 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0038972 CG7054 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P13696 PEBP1 "Phosphatidylethanolamine-binding protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3YIX4 PEBP1 "Phosphatidylethanolamine-binding protein 1" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1923650 Pbp2 "phosphatidylethanolamine binding protein 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:1344408 Pebp1 "phosphatidylethanolamine binding protein 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
cd00866154 cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin 9e-44
pfam01161147 pfam01161, PBP, Phosphatidylethanolamine-binding p 6e-18
pfam09384147 pfam09384, UTP15_C, UTP15 C terminal 3e-13
cd00457159 cd00457, PEBP, PhosphatidylEthanolamine-Binding Pr 8e-12
PLN00169175 PLN00169, PLN00169, CETS family protein; Provision 5e-10
cd00866154 cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin 2e-05
COG1881174 COG1881, COG1881, Phospholipid-binding protein [Ge 0.002
>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes Back     alignment and domain information 
 Score =  147 bits (373), Expect = 9e-44
 Identities = 65/188 (34%), Positives = 86/188 (45%), Gaps = 46/188 (24%)

Query: 152 IVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPAG--TYTLIMSGSDIHSGKVLAEYIGSG 209
           + Y ++  V+ GN LTP+  +  PTV++ +E      YTL+M                  
Sbjct: 5   VSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVM------------------ 46

Query: 210 PPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKG-FLHWLVVNIQGSD-----IHSGKVL 263
                               +D   P   +     +LHWLV NI GSD     +  G+VL
Sbjct: 47  --------------------VDPDAPSRDDPKFREWLHWLVTNIPGSDTTTGLVSKGEVL 86

Query: 264 AEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSP 323
             Y+G GPP GTG HRY+F +FKQ G +DF E     TS  GR GF  + FA K  LG P
Sbjct: 87  VPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKLPPTSGLGRRGFDVREFAKKNGLGLP 146

Query: 324 VAGNFYLA 331
           VA NF+  
Sbjct: 147 VAANFFQV 154

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). Length = 154
>gnl|CDD|216338 pfam01161, PBP, Phosphatidylethanolamine-binding protein Back     alignment and domain information
>gnl|CDD|192278 pfam09384, UTP15_C, UTP15 C terminal Back     alignment and domain information
>gnl|CDD|176642 cd00457, PEBP, PhosphatidylEthanolamine-Binding Protein (PEBP) domain Back     alignment and domain information
>gnl|CDD|177765 PLN00169, PLN00169, CETS family protein; Provisional Back     alignment and domain information
>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes Back     alignment and domain information
>gnl|CDD|224793 COG1881, COG1881, Phospholipid-binding protein [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 346
KOG3346|consensus185 100.0
PLN00169175 CETS family protein; Provisional 100.0
cd00866154 PEBP_euk PhosphatidylEthanolamine-Binding Protein 99.97
PF01161146 PBP: Phosphatidylethanolamine-binding protein; Int 99.89
PF09384148 UTP15_C: UTP15 C terminal; InterPro: IPR018983 Thi 99.83
cd00457159 PEBP PhosphatidylEthanolamine-Binding Protein (PEB 99.76
KOG0310|consensus487 99.61
KOG3346|consensus185 99.31
cd00865150 PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr 99.22
PRK10257158 putative kinase inhibitor protein; Provisional 99.16
PRK09818183 putative kinase inhibitor; Provisional 99.15
COG1881174 Phospholipid-binding protein [General function pre 99.1
TIGR00481141 Raf kinase inhibitor-like protein, YbhB/YbcL famil 99.01
PLN00169175 CETS family protein; Provisional 98.65
cd00866154 PEBP_euk PhosphatidylEthanolamine-Binding Protein 98.37
PF01161146 PBP: Phosphatidylethanolamine-binding protein; Int 97.68
cd00457159 PEBP PhosphatidylEthanolamine-Binding Protein (PEB 97.39
cd00865150 PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr 93.83
PRK09818183 putative kinase inhibitor; Provisional 92.76
PRK10257158 putative kinase inhibitor protein; Provisional 91.03
COG1881174 Phospholipid-binding protein [General function pre 90.29
TIGR00481141 Raf kinase inhibitor-like protein, YbhB/YbcL famil 89.29
PF04003110 Utp12: Dip2/Utp12 Family; InterPro: IPR007148 A la 81.69
>KOG3346|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.7e-42  Score=309.61  Aligned_cols=173  Identities=47%  Similarity=0.860  Sum_probs=161.1

Q ss_pred             hhhcccccccchhhcc--ceeEEEEeCCCeeecCCcccCcccccCCCeEEEe--cCCCceeEEEeecCcCCCceeEeecc
Q psy11040        131 RIKSEQESVRDLLELQ--GALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWD--AEPAGTYTLIMSGSDIHSGKVLAEYI  206 (346)
Q Consensus       131 kvf~e~~IiPDVl~~~--~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~v~~~--~~~~~~ytl~m~DpD~p~~~~~~~Y~  206 (346)
                      +.+.+.++++|+++..  ...|.|.|+++..|++|+.|+++++...|.++|+  ++++++|||+|+|||+|+++      
T Consensus         6 ~~~~~~~iv~Dvl~~~~p~~~l~V~y~~~~~v~~G~~l~pt~~~~~P~v~~~~~a~~~~~yTLvm~DPDaPsr~------   79 (185)
T KOG3346|consen    6 DPLNKHRIVPDVLDDFEPSVKLNVTYNSDIVVENGNELTPTQVKNRPIVSWDGFADPGSLYTLVMTDPDAPSRS------   79 (185)
T ss_pred             hhhhccCcchhhhccCCCceEEEEEeCCCeeecCCCEeCchhhccCCeEEEcCcCCCCCeEEEEEeCCCCCCCC------
Confidence            4567899999999996  8999999998899999999999999999999999  47889999999999999987      


Q ss_pred             CCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCC-ccCCcccccccCCCCCCCCCCccEEEEEe
Q psy11040        207 GSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSD-IHSGKVLAEYIGSGPPLGTGLHRYIFYVF  285 (346)
Q Consensus       207 ~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~-~~~~~~~~~Y~~P~Pp~gsg~HRYvflLf  285 (346)
                                                 +|    .+++++||+++||+|+. ++.|..+++|++|.||+|+|.||||||||
T Consensus        80 ---------------------------~p----~~rE~lHWlV~nIPg~~~~~~G~~i~~Y~~P~Pp~~tG~HRyVfll~  128 (185)
T KOG3346|consen   80 ---------------------------DP----KFREWLHWLVTNIPGTDGISKGQEISEYLGPGPPKGTGLHRYVFLLY  128 (185)
T ss_pred             ---------------------------CC----cceeEEEEEEEeecCCccccCCeEeeeeeCCCCCCCCCceEEEEEEE
Confidence                                       66    78999999999999998 99999999999999999999999999999


Q ss_pred             eeCCCCCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecCCCHHHHHhhcC
Q psy11040        286 KQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFM  345 (346)
Q Consensus       286 ~Q~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~~v~~~~~~~~  345 (346)
                      +|+++.++.++     +...|.+||+++|+++++|++||||+||++|||++|+.++++++
T Consensus       129 rQ~~~~~~~~~-----~~~~R~~F~~~~F~~~~~lg~PvA~~~f~aq~d~~~~~~~~~~~  183 (185)
T KOG3346|consen  129 RQPGRLDSDEP-----SPLSRGNFNTRKFAKKYELGTPVAGNFFQAQWDDYVPKLYKQLG  183 (185)
T ss_pred             EcCCccccccC-----CCCcccceeHHHHHHHhccCCchhhheehhhcchhhHHHHHhhc
Confidence            99999887653     34789999999999999999999999999999999999999875

>PLN00169 CETS family protein; Provisional Back     alignment and domain information
>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes Back     alignment and domain information
>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals Back     alignment and domain information
>PF09384 UTP15_C: UTP15 C terminal; InterPro: IPR018983 This entry represents the C-terminal domain of the U3 small nucleolar RNA-associated protein 15 (UTP15) Back     alignment and domain information
>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain Back     alignment and domain information
>KOG0310|consensus Back     alignment and domain information
>KOG3346|consensus Back     alignment and domain information
>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea Back     alignment and domain information
>PRK10257 putative kinase inhibitor protein; Provisional Back     alignment and domain information
>PRK09818 putative kinase inhibitor; Provisional Back     alignment and domain information
>COG1881 Phospholipid-binding protein [General function prediction only] Back     alignment and domain information
>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family Back     alignment and domain information
>PLN00169 CETS family protein; Provisional Back     alignment and domain information
>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes Back     alignment and domain information
>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals Back     alignment and domain information
>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain Back     alignment and domain information
>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea Back     alignment and domain information
>PRK09818 putative kinase inhibitor; Provisional Back     alignment and domain information
>PRK10257 putative kinase inhibitor protein; Provisional Back     alignment and domain information
>COG1881 Phospholipid-binding protein [General function prediction only] Back     alignment and domain information
>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family Back     alignment and domain information
>PF04003 Utp12: Dip2/Utp12 Family; InterPro: IPR007148 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1b7a_A186 Structure Of The Phosphatidylethanolamine-Binding P 4e-29
1a44_A185 Phosphatidylethanolamine Binding Protein From Calf 5e-29
2jyz_A179 Cg7054 Solution Structure Length = 179 2e-28
1kn3_A183 Murine Pebp-2 (Phosphatidylethanolamine-Binding Pro 2e-28
1bd9_A187 Human Phosphatidylethanolamine Binding Protein Leng 4e-27
2iqy_A190 Rat Phosphatidylethanolamine-Binding Protein Length 5e-27
2iqx_A187 Rat Phosphatidylethanolamine-Binding Protein Contai 6e-27
1wko_A180 Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana 4e-08
3axy_A170 Structure Of Florigen Activation Complex Consisting 9e-08
1wkp_A171 Flowering Locus T (Ft) From Arabidopsis Thaliana Le 5e-07
1qou_A181 Cen (Centroradialis) Protein From Antirrhinum Lengt 6e-07
1wpx_B220 Crystal Structure Of Carboxypeptidase Y Inhibitor C 5e-04
>pdb|1B7A|A Chain A, Structure Of The Phosphatidylethanolamine-Binding Protein From Bovine Brain Length = 186 Back     alignment and structure 
Iteration: 1

 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 100/185 (54%), Gaps = 39/185 (21%)
Query: 162 LGNELTPTSVKDEPT-VTWDA-EPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRY 219
           LG  LTPT VK+ PT +TWD  +P   YTL+++  D  S K                   
Sbjct: 36  LGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRK------------------- 76
Query: 220 IFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHR 279
                                 + + H+LVVN++G++I SG VL++Y+GSGPP GTGLHR
Sbjct: 77  ------------------DPKYREWHHFLVVNMKGNNISSGTVLSDYVGSGPPKGTGLHR 118
Query: 280 YIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPI 339
           Y++ V++Q G +   EP  SN S + R  F   +F  KY+LG+PVAG  Y A++D+YVP 
Sbjct: 119 YVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDYVPK 178
Query: 340 LHRQF 344
           L+ Q 
Sbjct: 179 LYEQL 183
>pdb|1A44|A Chain A, Phosphatidylethanolamine Binding Protein From Calf Brain Length = 185 Back     alignment and structure
>pdb|2JYZ|A Chain A, Cg7054 Solution Structure Length = 179 Back     alignment and structure
>pdb|1KN3|A Chain A, Murine Pebp-2 (Phosphatidylethanolamine-Binding Protein-2) Length = 183 Back     alignment and structure
>pdb|1BD9|A Chain A, Human Phosphatidylethanolamine Binding Protein Length = 187 Back     alignment and structure
>pdb|2IQY|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Length = 190 Back     alignment and structure
>pdb|2IQX|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Containing The S153e Mutation In The Complex With O-Phosphorylethanolamine Length = 187 Back     alignment and structure
>pdb|1WKO|A Chain A, Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana Length = 180 Back     alignment and structure
>pdb|3AXY|A Chain A, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 170 Back     alignment and structure
>pdb|1WKP|A Chain A, Flowering Locus T (Ft) From Arabidopsis Thaliana Length = 171 Back     alignment and structure
>pdb|1QOU|A Chain A, Cen (Centroradialis) Protein From Antirrhinum Length = 181 Back     alignment and structure
>pdb|1WPX|B Chain B, Crystal Structure Of Carboxypeptidase Y Inhibitor Complexed With The Cognate Proteinase Length = 220 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
2iqy_A190 Phosphatidylethanolamine-binding protein 1; alpha- 5e-43
2iqy_A190 Phosphatidylethanolamine-binding protein 1; alpha- 7e-14
2jyz_A179 CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo 6e-42
2jyz_A179 CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo 4e-14
1wpx_B220 Carboxypeptidase Y inhibitor; carboxypeptidase inh 4e-34
1wpx_B220 Carboxypeptidase Y inhibitor; carboxypeptidase inh 2e-05
2gzq_A200 Phosphatidylethanolamine-binding protein; structur 6e-34
1wko_A180 Terminal flower 1 protein; CIS-peptide, PEBP, sign 5e-32
1wko_A180 Terminal flower 1 protein; CIS-peptide, PEBP, sign 7e-12
3axy_A170 Protein heading DATE 3A; phosphatidylethanolamine- 5e-29
3axy_A170 Protein heading DATE 3A; phosphatidylethanolamine- 6e-08
1fux_A166 Hypothetical 19.5 kDa protein in EMRE-RUS intergen 1e-04
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Length = 190 Back     alignment and structure
 Score =  146 bits (369), Expect = 5e-43
 Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 39/195 (20%)

Query: 152 IVYPNNSKVSLGNELTPTSVKDEPT-VTWDAEPAGT-YTLIMSGSDIHSGKVLAEYIGSG 209
           + Y   +   LG  LTPT V + P+ ++WD    G  YTL+++  D  S           
Sbjct: 30  VDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPS----------- 78

Query: 210 PPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGS 269
                                           + + H+LVVN++G+DI SG VL+EY+GS
Sbjct: 79  --------------------------RKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGS 112

Query: 270 GPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFY 329
           GPP  TGLHRY++ V++Q   ++  EP  SN S + R  F  ++F  KY LG+PVAG  +
Sbjct: 113 GPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCF 172

Query: 330 LAQYDNYVPILHRQF 344
            A++D+ VP LH Q 
Sbjct: 173 QAEWDDSVPKLHDQL 187
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Length = 190 Back     alignment and structure
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179 Back     alignment and structure
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179 Back     alignment and structure
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220 Back     alignment and structure
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220 Back     alignment and structure
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Length = 200 Back     alignment and structure
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Length = 180 Back     alignment and structure
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Length = 180 Back     alignment and structure
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Length = 170 Back     alignment and structure
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Length = 170 Back     alignment and structure
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2 Length = 166 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
2iqy_A190 Phosphatidylethanolamine-binding protein 1; alpha- 100.0
2jyz_A179 CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo 100.0
3axy_A170 Protein heading DATE 3A; phosphatidylethanolamine- 100.0
1wko_A180 Terminal flower 1 protein; CIS-peptide, PEBP, sign 100.0
2gzq_A200 Phosphatidylethanolamine-binding protein; structur 100.0
1wpx_B220 Carboxypeptidase Y inhibitor; carboxypeptidase inh 100.0
1fux_A166 Hypothetical 19.5 kDa protein in EMRE-RUS intergen 99.67
1fjj_A159 Hypothetical 17.1 kDa protein in MODC-BIOA interge 99.57
3n08_A153 Putative phosphatidylethanolamine-binding protein; 99.53
2evv_A207 Hypothetical protein HP0218; alpha-beta structure, 99.37
2iqy_A190 Phosphatidylethanolamine-binding protein 1; alpha- 98.87
2jyz_A179 CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo 98.73
3axy_A170 Protein heading DATE 3A; phosphatidylethanolamine- 98.61
1wko_A180 Terminal flower 1 protein; CIS-peptide, PEBP, sign 98.47
1wpx_B220 Carboxypeptidase Y inhibitor; carboxypeptidase inh 98.11
2gzq_A200 Phosphatidylethanolamine-binding protein; structur 98.04
1fux_A166 Hypothetical 19.5 kDa protein in EMRE-RUS intergen 97.28
1fjj_A159 Hypothetical 17.1 kDa protein in MODC-BIOA interge 96.67
3n08_A153 Putative phosphatidylethanolamine-binding protein; 96.15
2evv_A207 Hypothetical protein HP0218; alpha-beta structure, 95.05
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Back     alignment and structure
Probab=100.00  E-value=2.8e-40  Score=297.96  Aligned_cols=178  Identities=39%  Similarity=0.677  Sum_probs=162.3

Q ss_pred             hhhcc--cccccchhhcc-ceeEEEEeCCCeeecCCcccCcccccCCCe-EEEecCC-CceeEEEeecCcCCCceeEeec
Q psy11040        131 RIKSE--QESVRDLLELQ-GALQMIVYPNNSKVSLGNELTPTSVKDEPT-VTWDAEP-AGTYTLIMSGSDIHSGKVLAEY  205 (346)
Q Consensus       131 kvf~e--~~IiPDVl~~~-~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~-v~~~~~~-~~~ytl~m~DpD~p~~~~~~~Y  205 (346)
                      +.+++  ++|+||+++.. ...|.|.|+++..|.+|+.|++.++...|. ++|+..+ ++.|||+|+|||+|+++     
T Consensus         6 ~~~~~~~~~vipdvl~~~p~~~l~v~~~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~-----   80 (190)
T 2iqy_A            6 ADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRK-----   80 (190)
T ss_dssp             CCGGGTTSTTCGGGTSSCCSEECEEECSSCBCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSS-----
T ss_pred             HHHHHhcCccCCcCcCCCCCceEEEEECCCcccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCC-----
Confidence            56778  99999999986 889999997667899999999999999999 9998754 68999999999999876     


Q ss_pred             cCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCCccCCcccccccCCCCCCCCCCccEEEEEe
Q psy11040        206 IGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVF  285 (346)
Q Consensus       206 ~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~~~~~~~~~Y~~P~Pp~gsg~HRYvflLf  285 (346)
                                                  +|    .+++++||++.||+++.+..|..+++|.||+||+|+|.|||+|+||
T Consensus        81 ----------------------------~p----~~~~~~HWlv~nIp~~~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly  128 (190)
T 2iqy_A           81 ----------------------------DP----KFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVY  128 (190)
T ss_dssp             ----------------------------SC----TTCCEEEEEEEEEETTBGGGSEEEECCCCCCCCTTSCCEEEEEEEE
T ss_pred             ----------------------------CC----CcCCEEEEEEeCCChhccccCccccceeCCCCcCCCCceEEEEEEE
Confidence                                        45    5779999999999999888898999999999999999999999999


Q ss_pred             eeCCCCCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecCCCHHHHHhhcC
Q psy11040        286 KQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFM  345 (346)
Q Consensus       286 ~Q~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~~v~~~~~~~~  345 (346)
                      +|+..+++.++.+.+.+..+|.+||+++|+++++|+.|||||||++|||++|+++++|++
T Consensus       129 ~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pVA~~fF~~q~d~~v~~~~~~~~  188 (190)
T 2iqy_A          129 EQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLHDQLA  188 (190)
T ss_dssp             ECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHHTTCCSCSEEEEEEECCCTTHHHHHHHHT
T ss_pred             EeCCccCcchhhccCCCcccCCCcCHHHHHHHhCCCCeeEEEEEEEEccCchHHHHHHhc
Confidence            999988887766666667899999999999999999999999999999999999999974
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Back     alignment and structure
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Back     alignment and structure
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Back     alignment and structure
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Back     alignment and structure
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Back     alignment and structure
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2 Back     alignment and structure
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A* Back     alignment and structure
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0 Back     alignment and structure
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori} Back     alignment and structure
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Back     alignment and structure
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Back     alignment and structure
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Back     alignment and structure
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Back     alignment and structure
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Back     alignment and structure
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Back     alignment and structure
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2 Back     alignment and structure
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A* Back     alignment and structure
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0 Back     alignment and structure
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 346
d1a44a_185 b.17.1.1 (A:) Phosphatidylethanolamine binding pro 2e-51
d1a44a_185 b.17.1.1 (A:) Phosphatidylethanolamine binding pro 4e-14
d1wpxb1219 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor 8e-34
d1wpxb1219 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor 1e-05
d1qoua_164 b.17.1.1 (A:) Centroradialis protein Cen {Garden s 9e-30
d1qoua_164 b.17.1.1 (A:) Centroradialis protein Cen {Garden s 2e-07
d1fuxa_165 b.17.1.2 (A:) Hypothetical protein YbcL {Escherich 7e-04
>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  167 bits (423), Expect = 2e-51
 Identities = 71/194 (36%), Positives = 101/194 (52%), Gaps = 39/194 (20%)

Query: 152 IVYPNNSKVSLGNELTPTSVKDEPT-VTWDA-EPAGTYTLIMSGSDIHSGKVLAEYIGSG 209
           + Y       LG  LTPT VK+ PT +TWD  +P   YTL+++  D  S           
Sbjct: 26  VKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPS----------- 74

Query: 210 PPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGS 269
                                           + + H+LVVN++G++I SG VL++Y+GS
Sbjct: 75  --------------------------RKDPKYREWHHFLVVNMKGNNISSGTVLSDYVGS 108

Query: 270 GPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFY 329
           GPP GTGLHRY++ V++Q G +   EP  SN S + R  F   +F  KY+LG+PVAG  Y
Sbjct: 109 GPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCY 168

Query: 330 LAQYDNYVPILHRQ 343
            A++D+YVP L+ Q
Sbjct: 169 QAEWDDYVPKLYEQ 182
>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219 Back     information, alignment and structure
>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219 Back     information, alignment and structure
>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164 Back     information, alignment and structure
>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164 Back     information, alignment and structure
>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
d1a44a_185 Phosphatidylethanolamine binding protein, PEBP {Co 100.0
d1wpxb1219 Carboxypeptidase Y inhibitor {Baker's yeast (Sacch 100.0
d1qoua_164 Centroradialis protein Cen {Garden snapdragon (Ant 100.0
d1a44a_185 Phosphatidylethanolamine binding protein, PEBP {Co 99.21
d1fuxa_165 Hypothetical protein YbcL {Escherichia coli [TaxId 99.17
d1fjja_159 Hypothetical protein YbhB {Escherichia coli [TaxId 99.01
d1wpxb1219 Carboxypeptidase Y inhibitor {Baker's yeast (Sacch 98.62
d1qoua_164 Centroradialis protein Cen {Garden snapdragon (Ant 98.52
d1fuxa_165 Hypothetical protein YbcL {Escherichia coli [TaxId 91.14
>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.7e-42  Score=306.78  Aligned_cols=162  Identities=45%  Similarity=0.826  Sum_probs=149.5

Q ss_pred             ceeEEEEeCCCeeecCCcccCcccccCCCe-EEEec-CCCceeEEEeecCcCCCceeEeeccCCCCCCCCCcceEEEEEE
Q psy11040        147 GALQMIVYPNNSKVSLGNELTPTSVKDEPT-VTWDA-EPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVF  224 (346)
Q Consensus       147 ~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~-v~~~~-~~~~~ytl~m~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~  224 (346)
                      .+.|+|.|+++..+++|+.|++++|+.+|+ +.|.. +++++|||+|+|||+|+++                        
T Consensus        21 ~~~L~V~y~~~~~v~~G~~l~p~~~~~~P~~v~~~~~~~~~~YtlvMvDPDaPs~~------------------------   76 (185)
T d1a44a_          21 QHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRK------------------------   76 (185)
T ss_dssp             SEECEEEETTEEECSTTEECCTTTTSSCCSEEECTTCCTTSEEEEEEEETTSSCSS------------------------
T ss_pred             CceEEEEECCceecCCCCEECHHHHhcCCceEEecCCCCCCeEEEEEECCCCCCCC------------------------
Confidence            788999999877779999999999999996 78875 6678999999999999876                        


Q ss_pred             eecCccccCCCCCCCCceeeEEEEEeecCCCCccCCcccccccCCCCCCCCCCccEEEEEeeeCCCCCcCCCCCCCCCCC
Q psy11040        225 KQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAE  304 (346)
Q Consensus       225 ~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~~~~~~~~~Y~~P~Pp~gsg~HRYvflLf~Q~~~~~~~~~~~~~~~~~  304 (346)
                               +|    +.+++|||+++|++++.++.|..+++|++|.||+|+|+||||||||+|++.+++.++.+.+.+..
T Consensus        77 ---------~~----~~~e~lHWlv~Ni~~~~~~~g~~l~~Y~~P~Pp~gtg~HRYvflLf~Q~~~~~~~~~~~~~~~~~  143 (185)
T d1a44a_          77 ---------DP----KYREWHHFLVVNMKGNNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGD  143 (185)
T ss_dssp             ---------SC----TTCCEEEEEEEEEETTCGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCCCCBCTTCCT
T ss_pred             ---------CC----CcceEEEEEEeCCCCCcCCCCeEeeeEecCcCCCCCCceEEEEEEEEccCCCCccccccCCCCcc
Confidence                     45    67899999999999999999999999999999999999999999999999998887777666778


Q ss_pred             CCCCcChHHHHHHhCCCCceEEEEEEEecCCCHHHHHhhcC
Q psy11040        305 GRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFM  345 (346)
Q Consensus       305 ~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~~v~~~~~~~~  345 (346)
                      +|.+||+++|+++++|+.|||||||+++||++|+++|+|+.
T Consensus       144 ~R~~f~~~~F~~~~~L~~Pva~nfF~~~~D~~V~~~~~~~~  184 (185)
T d1a44a_         144 HRGKFKVASFRKKYELGAPVAGTCYQAEWDDYVPKLYEQLS  184 (185)
T ss_dssp             TCTTCCHHHHHHHTTCCSCSEEEEEEECCCTTHHHHHHHHT
T ss_pred             ccCCCCHHHHHHHcCCCCCeEEEEEEEecCcHHHHHHHHhc
Confidence            99999999999999999999999999999999999999974
>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Back     information, alignment and structure
>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Back     information, alignment and structure
>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Back     information, alignment and structure