Psyllid ID: psy11092

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
MSLVANLFKHILRNHPSTSIRGNSKLNLNSKCICRSISNESNAKDENPPEKCEVLTAKELLENSTTYVGETVETEEDVWASKPYPKHYDPRQSQAQHSLRPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSISGR
cHHHHHHHHHHHHHcccccccccccccccHHHHHHccccccccccccccccHHHccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHccHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHHHcccccccccccccEEEccc
ccHHHHHHHHHHHHcccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccEEEEEcccccccccccHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHccccEEEcccEEEEccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHHHccccEEEEEEccccEEEEEcc
MSLVANLFKHIlrnhpstsirgnsklnlnskcicrsisnesnakdenppekcEVLTAKELLEnsttyvgetveteedvwaskpypkhydprqsqaqhslrpktdprdtsiimfpgqgtqfvgmggdliktLPMAKDLFEEASAILKFDLLKLclegpaselnktIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITaltfsgvfDYETALELIKIRSQAMQLACEiapggmasvmygpdSQLNLAMKRAKEWcvdrgipepelssisgr
MSLVANLFKhilrnhpstsirgnsklnlNSKCICRSISnesnakdenppekCEVLTAKEllensttyvgetveteedvWASKpypkhydprqsqaqhslrpktdprdTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVdrgipepelssisgr
MSLVANLFKHILRNHPSTSIRGNSKLNLNSKCICRSISNESNAKDENPPEKCEVLTAKELLENSttyvgetveteedvWASKPYPKHYDPRQSQAQHSLRPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSISGR
*****NLFKHIL******************KCIC*************************LL**STTYVGETV*************************************IIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDR*************
*******FKH*L************************************************L***********************************************SIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSISGR
MSLVANLFKHILRNHPSTSIRGNSKLNLNSKCICRSISN***********KCEVLTAKELLENSTTYVGETVETEEDVWASKPYPKH****************DPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSISGR
*SLVANLFKHILRNHPST***GNSKLNLNSKCICRSISNESNAKDENPPEKCEVLTAKELLENSTTYVGETVETEEDVWASKPYPKHYDPRQSQAQHSLRPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSISGR
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSLVANLFKHILRNHPSTSIRGNSKLNLNSKCICRSISNESNAKDENPPEKCEVLTAKELLENSTTYVGETVETEEDVWASKPYPKHYDPRQSQAQHSLRPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSISGR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query278 2.2.26 [Sep-21-2011]
Q8T3L6 379 Probable malonyl-CoA-acyl yes N/A 0.611 0.448 0.555 2e-54
Q8R3F5 381 Malonyl-CoA-acyl carrier yes N/A 0.629 0.459 0.454 5e-39
Q8IVS2 390 Malonyl-CoA-acyl carrier yes N/A 0.593 0.423 0.457 6e-38
Q8X8I7 309 Malonyl CoA-acyl carrier N/A N/A 0.528 0.475 0.38 4e-20
P0AAI9 309 Malonyl CoA-acyl carrier N/A N/A 0.528 0.475 0.38 4e-20
P0AAJ0 309 Malonyl CoA-acyl carrier yes N/A 0.528 0.475 0.38 4e-20
P43712 312 Malonyl CoA-acyl carrier yes N/A 0.532 0.474 0.366 2e-19
O85140 309 Malonyl CoA-acyl carrier yes N/A 0.528 0.475 0.36 5e-19
O34825 288 Polyketide biosynthesis m yes N/A 0.564 0.545 0.390 1e-18
P71019 317 Malonyl CoA-acyl carrier no N/A 0.532 0.466 0.371 1e-18
>sp|Q8T3L6|FABD_DROME Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Drosophila melanogaster GN=beg PE=2 SV=2 Back     alignment and function desciption
 Score =  212 bits (540), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)

Query: 100 RPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPAS 159
           RP  DP++TS+++FPGQGTQ+VGM  DL++  P A+ +FE A+ +LK+DLLK+CLEGP  
Sbjct: 59  RPAIDPKETSVMLFPGQGTQYVGMAKDLLR-FPGARRIFELANEVLKYDLLKICLEGPRE 117

Query: 160 ELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETAL 219
           +LN+T HAQ AV V S+ ALE+LREERP AIE CVA  GFSLGEITAL ++    ++ AL
Sbjct: 118 KLNRTEHAQLAVMVSSLAALEQLREERPKAIETCVAAAGFSLGEITALVYADALPFDKAL 177

Query: 220 ELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEP 270
            L+++R+ AMQ AC+ A G MA  +YGPD+ L  A  RA++WC+D+G+  P
Sbjct: 178 RLVQVRATAMQAACDQAAGAMAMTLYGPDTNLGEACARAQQWCLDKGVESP 228
Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the ACP protein. This suggests the existence of the biosynthesis of fatty acids in mitochondrias.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q8R3F5|FABD_MOUSE Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus GN=Mcat PE=2 SV=3 Back     alignment and function description
>sp|Q8IVS2|FABD_HUMAN Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens GN=MCAT PE=1 SV=2 Back     alignment and function description
>sp|Q8X8I7|FABD_ECO57 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O157:H7 GN=fabD PE=3 SV=3 Back     alignment and function description
>sp|P0AAI9|FABD_ECOLI Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli (strain K12) GN=fabD PE=1 SV=2 Back     alignment and function description
>sp|P0AAJ0|FABD_ECOL6 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabD PE=3 SV=2 Back     alignment and function description
>sp|P43712|FABD_HAEIN Malonyl CoA-acyl carrier protein transacylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fabD PE=3 SV=1 Back     alignment and function description
>sp|O85140|FABD_SALTY Malonyl CoA-acyl carrier protein transacylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fabD PE=1 SV=3 Back     alignment and function description
>sp|O34825|PKSC_BACSU Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC OS=Bacillus subtilis (strain 168) GN=pksC PE=1 SV=1 Back     alignment and function description
>sp|P71019|FABD_BACSU Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis (strain 168) GN=fabD PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query278
328725801294 PREDICTED: probable malonyl-CoA-acyl car 0.780 0.738 0.558 3e-67
91078278 406 PREDICTED: similar to AGAP005650-PA [Tri 0.766 0.524 0.546 4e-62
170058667 389 malonyl CoA-acyl carrier protein transac 0.834 0.596 0.481 6e-58
157126317 397 malonyl coa-acyl carrier protein transac 0.766 0.536 0.509 6e-57
312373568 806 hypothetical protein AND_17290 [Anophele 0.766 0.264 0.486 5e-56
158294542 397 AGAP005650-PA [Anopheles gambiae str. PE 0.766 0.536 0.495 4e-55
321456222 380 hypothetical protein DAPPUDRAFT_302033 [ 0.751 0.55 0.497 6e-55
195375136 381 GJ12549 [Drosophila virilis] gi|19415351 0.625 0.456 0.542 4e-54
198462460375 GA20625 [Drosophila pseudoobscura pseudo 0.611 0.453 0.555 1e-53
195170737375 GL16194 [Drosophila persimilis] gi|19411 0.611 0.453 0.555 1e-53
>gi|328725801|ref|XP_003248621.1| PREDICTED: probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like, partial [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 124/222 (55%), Positives = 170/222 (76%), Gaps = 5/222 (2%)

Query: 58  KELLENSTTYVGETVETEEDVWASKPYPK-HYDPR--QSQAQHSLRPKTDPRDTSIIMFP 114
           K+LLE+ T     +V  + + W + PYPK  Y P   QSQAQH+LRPK DP++TSI+MFP
Sbjct: 60  KKLLEDGTVPEESSVVGDTENWTTSPYPKGSYVPHKNQSQAQHALRPKVDPKETSILMFP 119

Query: 115 GQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVC 174
           GQGTQFVGMG +L+   P   ++F  AS ILK++LLKLCLEGP S+L++TI++Q A+ VC
Sbjct: 120 GQGTQFVGMGKNLL-VFPQVVEMFNAASEILKYNLLKLCLEGPKSKLDQTIYSQPAILVC 178

Query: 175 SIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACE 234
           S+GA+EKL+EE+P+AIENC+A  G+S+GE  ALTF+G F +E A+ L+KIR++AM  A E
Sbjct: 179 SLGAIEKLKEEQPSAIENCMAVAGYSIGEFAALTFAGCFSFEQAVSLVKIRAEAMHYASE 238

Query: 235 IAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEPELSSIS 276
           I PGGMA++   PDS+LN A+K A++WC+D+GI +P + SIS
Sbjct: 239 IEPGGMANIYIKPDSKLNYALKMARDWCLDKGIEKP-VCSIS 279

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91078278|ref|XP_971673.1| PREDICTED: similar to AGAP005650-PA [Tribolium castaneum] gi|270003914|gb|EFA00362.1| hypothetical protein TcasGA2_TC003204 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|170058667|ref|XP_001865020.1| malonyl CoA-acyl carrier protein transacylase [Culex quinquefasciatus] gi|167877696|gb|EDS41079.1| malonyl CoA-acyl carrier protein transacylase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157126317|ref|XP_001654591.1| malonyl coa-acyl carrier protein transacylase [Aedes aegypti] gi|108882563|gb|EAT46788.1| AAEL002069-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|312373568|gb|EFR21283.1| hypothetical protein AND_17290 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|158294542|ref|XP_315668.4| AGAP005650-PA [Anopheles gambiae str. PEST] gi|157015611|gb|EAA11696.5| AGAP005650-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|321456222|gb|EFX67335.1| hypothetical protein DAPPUDRAFT_302033 [Daphnia pulex] Back     alignment and taxonomy information
>gi|195375136|ref|XP_002046359.1| GJ12549 [Drosophila virilis] gi|194153517|gb|EDW68701.1| GJ12549 [Drosophila virilis] Back     alignment and taxonomy information
>gi|198462460|ref|XP_001352434.2| GA20625 [Drosophila pseudoobscura pseudoobscura] gi|198150834|gb|EAL29930.2| GA20625 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195170737|ref|XP_002026168.1| GL16194 [Drosophila persimilis] gi|194111048|gb|EDW33091.1| GL16194 [Drosophila persimilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query278
FB|FBgn0036691 379 beg "bad egg" [Drosophila mela 0.611 0.448 0.555 5.8e-50
ZFIN|ZDB-GENE-041111-231 364 mcat "malonyl CoA:ACP acyltran 0.629 0.480 0.471 3.7e-39
MGI|MGI:2388651 381 Mcat "malonyl CoA:ACP acyltran 0.629 0.459 0.454 1.1e-37
UNIPROTKB|F1PUF5 384 MCAT "Uncharacterized protein" 0.625 0.453 0.458 1.5e-37
RGD|1306698 380 Mcat "malonyl CoA:ACP acyltran 0.593 0.434 0.469 3.9e-37
UNIPROTKB|E1BPG0 387 MCAT "Uncharacterized protein" 0.636 0.457 0.443 6.3e-37
UNIPROTKB|F1SJS0 384 LOC100523602 "Uncharacterized 0.593 0.429 0.463 1.7e-36
UNIPROTKB|Q8IVS2 390 MCAT "Malonyl-CoA-acyl carrier 0.640 0.456 0.430 2.7e-36
UNIPROTKB|F1NZA8 375 F1NZA8 "Uncharacterized protei 0.647 0.48 0.409 9.2e-36
TAIR|locus:2060884 393 EMB3147 "EMBRYO DEFECTIVE 3147 0.521 0.368 0.436 4e-26
FB|FBgn0036691 beg "bad egg" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 95/171 (55%), Positives = 129/171 (75%)

Query:   100 RPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPAS 159
             RP  DP++TS+++FPGQGTQ+VGM  DL++  P A+ +FE A+ +LK+DLLK+CLEGP  
Sbjct:    59 RPAIDPKETSVMLFPGQGTQYVGMAKDLLR-FPGARRIFELANEVLKYDLLKICLEGPRE 117

Query:   160 ELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETAL 219
             +LN+T HAQ AV V S+ ALE+LREERP AIE CVA  GFSLGEITAL ++    ++ AL
Sbjct:   118 KLNRTEHAQLAVMVSSLAALEQLREERPKAIETCVAAAGFSLGEITALVYADALPFDKAL 177

Query:   220 ELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEP 270
              L+++R+ AMQ AC+ A G MA  +YGPD+ L  A  RA++WC+D+G+  P
Sbjct:   178 RLVQVRATAMQAACDQAAGAMAMTLYGPDTNLGEACARAQQWCLDKGVESP 228
GO:0005739 "mitochondrion" evidence=ISS
GO:0004314 "[acyl-carrier-protein
GO:0006633 "fatty acid biosynthetic process" evidence=ISS
ZFIN|ZDB-GENE-041111-231 mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2388651 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PUF5 MCAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1306698 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPG0 MCAT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJS0 LOC100523602 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IVS2 MCAT "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZA8 F1NZA8 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2060884 EMB3147 "EMBRYO DEFECTIVE 3147" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8T3L6FABD_DROME2, ., 3, ., 1, ., 3, 90.55550.61150.4485yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!
3rd Layer2.3.1.39LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
PLN02752 343 PLN02752, PLN02752, [acyl-carrier protein] S-malon 2e-49
TIGR00128 290 TIGR00128, fabD, malonyl CoA-acyl carrier protein 1e-43
COG0331 310 COG0331, FabD, (acyl-carrier-protein) S-malonyltra 9e-43
smart00827 298 smart00827, PKS_AT, Acyl transferase domain in pol 9e-23
COG3321 1061 COG3321, COG3321, Polyketide synthase modules and 3e-18
pfam00698 319 pfam00698, Acyl_transf_1, Acyl transferase domain 1e-17
TIGR03131 295 TIGR03131, malonate_mdcH, malonate decarboxylase, 3e-17
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 1e-05
>gnl|CDD|215401 PLN02752, PLN02752, [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information 
 Score =  166 bits (422), Expect = 2e-49
 Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 80  ASKPYPKHYDPRQSQAQHSLRPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFE 139
           AS           SQA  +     D + T+  +FPGQG Q VGMG +    +P AK LF+
Sbjct: 11  ASASRVSMSVSVGSQATAADALFADYKPTTAFLFPGQGAQAVGMGKEA-AEVPAAKALFD 69

Query: 140 EASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLR--EERPAAIENCVATL 197
           +AS IL +DLL +C+ GP  +L+ T+ +Q A++V S+ A+EKLR  +   A I++     
Sbjct: 70  KASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEKLRARDGGQAVIDSVDVCA 129

Query: 198 GFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASV 243
           G SLGE TAL F+G   +E  L+L+K+R +AMQ A +  P GM SV
Sbjct: 130 GLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSV 175

Length = 343
>gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information
>gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 278
PF00698 318 Acyl_transf_1: Acyl transferase domain; InterPro: 100.0
COG0331 310 FabD (acyl-carrier-protein) S-malonyltransferase [ 100.0
TIGR00128 290 fabD malonyl CoA-acyl carrier protein transacylase 100.0
PLN02752 343 [acyl-carrier protein] S-malonyltransferase 100.0
TIGR02816 538 pfaB_fam PfaB family protein. The protein PfaB is 100.0
TIGR03131 295 malonate_mdcH malonate decarboxylase, epsilon subu 100.0
smart00827 298 PKS_AT Acyl transferase domain in polyketide synth 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
KOG2926|consensus 386 99.96
KOG1202|consensus 2376 99.94
COG3321 1061 Polyketide synthase modules and related proteins [ 99.94
cd07198172 Patatin Patatin-like phospholipase. Patatin is a s 85.38
cd07219 382 Pat_PNPLA1 Patatin-like phospholipase domain conta 81.35
COG1752 306 RssA Predicted esterase of the alpha-beta hydrolas 80.72
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information 
Probab=100.00  E-value=4.3e-37  Score=284.56  Aligned_cols=159  Identities=35%  Similarity=0.531  Sum_probs=138.2

Q ss_pred             EEEeCCCCcChhhhHHHHHhhCchHHHHHHHHHHHh----CCCHHHHhhcCCC-ccchhhhhhhHHHHHHHHHHHHHHHh
Q psy11092        110 IIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAIL----KFDLLKLCLEGPA-SELNKTIHAQAAVFVCSIGALEKLRE  184 (278)
Q Consensus       110 aflFpGqGaq~~gmg~~L~~~~p~~r~~i~~~~~~l----g~~l~~~l~~~~~-~~l~~~~~~qpai~a~q~a~~~ll~~  184 (278)
                      +|+|||||+||+|||++||+.+|.|++.+++|++++    |+++.+++.+++. ..+.++.++||+||++|++++++|++
T Consensus         1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~   80 (318)
T PF00698_consen    1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS   80 (318)
T ss_dssp             EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence            699999999999999999999999999999999885    7999999888775 67899999999999999999999999


Q ss_pred             cCCCccccCcEEEecChhHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhhcCCCCeeEEEecCCHHHHHHHHHhcCCceEE
Q psy11092        185 ERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVD  264 (278)
Q Consensus       185 ~~p~gi~p~~~v~GhSlGEiaAa~aAG~ls~~da~~lv~~Rg~l~~~~~~~~~G~M~av~~~~~~~v~~~~~~~~~~v~i  264 (278)
                         +||+| ++++|||+||++|+|++|+|+++|++++++.|+++|.+..  .+|+|++|..   +..+.... ..++++|
T Consensus        81 ---~Gi~P-~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~--~~g~m~av~~---~~~~~~~~-~~~~v~i  150 (318)
T PF00698_consen   81 ---WGIKP-DAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA--PPGAMLAVRG---EEEEEKLA-LPPDVEI  150 (318)
T ss_dssp             ---TTHCE-SEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS--TSEEEEEEES---HHHHHHHH-TTTTEEE
T ss_pred             ---ccccc-ceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh--hcccccchhh---hHHhhhcc-cccccee
Confidence               67776 9999999999999999999999999999999999999874  7899999999   33333333 5667999


Q ss_pred             EeeeCCCcEEEecC
Q psy11092        265 RGIPEPELSSISGR  278 (278)
Q Consensus       265 A~~Nsp~~~VisG~  278 (278)
                      |++|+|+++||||+
T Consensus       151 a~~Ns~~q~visG~  164 (318)
T PF00698_consen  151 ANINSPRQVVISGE  164 (318)
T ss_dssp             EEEEETTEEEEEEE
T ss_pred             eeeccccccccCCC
Confidence            99999999999995

3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>KOG2926|consensus Back     alignment and domain information
>KOG1202|consensus Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>cd07198 Patatin Patatin-like phospholipase Back     alignment and domain information
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1 Back     alignment and domain information
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
2c2n_A 339 Structure Of Human Mitochondrial Malonyltransferase 2e-38
2g1h_A 308 Structure Of E.Coli Fabd Complexed With Glycerol Le 3e-21
1mla_A 309 The Escherichia Coli Malonyl-Coa:acyl Carrier Prote 3e-21
2h1y_A 321 Crystal Structure Of Malonyl-Coa:acyl Carrier Prote 2e-18
3hjv_A 312 1.7 Angstrom Resolution Crystal Structure Of An Acy 3e-18
3h0p_A 312 2.0 Angstrom Crystal Structure Of An Acyl Carrier P 6e-17
3ptw_A 336 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 9e-17
3ezo_A 318 Crystal Structure Of Acyl-Carrier-Protein S- Malony 1e-15
3im8_A 307 Crystal Structure Of Mcat From Streptococcus Pneumo 1e-15
3k89_A 314 Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo088 2e-15
3qat_A 318 Crystal Structure Of Acyl-Carrier-Protein-S-Malonyl 5e-15
3g87_A 394 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 8e-15
3rgi_A 286 Trans-Acting Transferase From Disorazole Synthase L 1e-14
3sbm_A 281 Trans-Acting Transferase From Disorazole Synthase I 1e-14
2cuy_A 305 Crystal Structure Of Malonyl Coa-acyl Carrier Prote 2e-14
3im9_A 316 Crystal Structure Of Mcat From Staphylococcus Aureu 1e-13
3tqe_A 316 Structure Of The Malonyl Coa-Acyl Carrier Protein T 4e-12
2cdh_4 305 Architecture Of The Thermomyces Lanuginosus Fungal 7e-09
2cf2_B 304 Architecture Of Mammalian Fatty Acid Synthase Lengt 8e-09
1nm2_A 317 "malonyl-Coa:acp Transacylase" Length = 317 9e-09
2qj3_A 322 Mycobacterium Tuberculosis Fabd Length = 322 1e-07
2qc3_A 303 Crystal Structure Of Mcat From Mycobacterium Tuberc 2e-07
2qo3_A 915 Crystal Structure Of [ks3][at3] Didomain From Modul 1e-06
3zen_D 3089 Cryo-em Structure Of The Mycobacterial Fatty Acid S 4e-06
4amo_A 421 Crystal Structure Of The Acyltransferase Domain Of 1e-05
4amn_A 421 Crystal Structure Of The Acyltransferase Domain Of 2e-05
4amm_A 401 Crystal Structure Of The Acyltransferase Domain Of 2e-05
2hg4_A 917 Structure Of The Ketosynthase-acyltransferase Didom 2e-04
>pdb|2C2N|A Chain A, Structure Of Human Mitochondrial Malonyltransferase Length = 339 Back     alignment and structure 
Iteration: 1

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 109 SIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQ 168
           S+++FPGQG+Q VGMG  L+   P  ++L+  A  +L +DLL+L L GP   L++T+H Q
Sbjct: 27  SVLLFPGQGSQVVGMGRGLL-NYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHCQ 85
Query: 169 AAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQA 228
            A+FV S+ A+EKL   +P+ IENCVA  GFS+GE  AL F+G  ++   L  +KIR++A
Sbjct: 86  PAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAEA 145
Query: 229 MQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRGIPEP 270
           MQ A E  P GM SV+  P S+ N A   A+E C   GI  P
Sbjct: 146 MQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENP 187
>pdb|2G1H|A Chain A, Structure Of E.Coli Fabd Complexed With Glycerol Length = 308 Back     alignment and structure
>pdb|1MLA|A Chain A, The Escherichia Coli Malonyl-Coa:acyl Carrier Protein Transacylase At 1.5-Angstroms Resolution. Crystal Structure Of A Fatty Acid Synthase Component Length = 309 Back     alignment and structure
>pdb|2H1Y|A Chain A, Crystal Structure Of Malonyl-Coa:acyl Carrier Protein Transacylase (Mcat) From Helicobacter Pylori Length = 321 Back     alignment and structure
>pdb|3HJV|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of An Acyl Carrier Protein S-Malonyltransferase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 Length = 312 Back     alignment and structure
>pdb|3H0P|A Chain A, 2.0 Angstrom Crystal Structure Of An Acyl Carrier Protein S- Malonyltransferase From Salmonella Typhimurium. Length = 312 Back     alignment and structure
>pdb|3PTW|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Clostridium Perfringens Atcc 13124 Length = 336 Back     alignment and structure
>pdb|3EZO|A Chain A, Crystal Structure Of Acyl-Carrier-Protein S- Malonyltransferase From Burkholderia Pseudomallei 1710b Length = 318 Back     alignment and structure
>pdb|3IM8|A Chain A, Crystal Structure Of Mcat From Streptococcus Pneumoniae Length = 307 Back     alignment and structure
>pdb|3K89|A Chain A, Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo0880(Fabd) Complexed With Glycerol Length = 314 Back     alignment and structure
>pdb|3QAT|A Chain A, Crystal Structure Of Acyl-Carrier-Protein-S-Malonyltransferase From Bartonella Henselae Length = 318 Back     alignment and structure
>pdb|3G87|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Burkholderia Pseudomallei Using Dried Seaweed As Nucleant Or Protease Length = 394 Back     alignment and structure
>pdb|3RGI|A Chain A, Trans-Acting Transferase From Disorazole Synthase Length = 286 Back     alignment and structure
>pdb|3SBM|A Chain A, Trans-Acting Transferase From Disorazole Synthase In Complex With Acetate Length = 281 Back     alignment and structure
>pdb|2CUY|A Chain A, Crystal Structure Of Malonyl Coa-acyl Carrier Protein Transacylase From Thermus Thermophilus Hb8 Length = 305 Back     alignment and structure
>pdb|3IM9|A Chain A, Crystal Structure Of Mcat From Staphylococcus Aureus Length = 316 Back     alignment and structure
>pdb|3TQE|A Chain A, Structure Of The Malonyl Coa-Acyl Carrier Protein Transacylase (Fabd) From Coxiella Burnetii Length = 316 Back     alignment and structure
>pdb|2CDH|4 Chain 4, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. Length = 305 Back     alignment and structure
>pdb|2CF2|B Chain B, Architecture Of Mammalian Fatty Acid Synthase Length = 304 Back     alignment and structure
>pdb|1NM2|A Chain A, "malonyl-Coa:acp Transacylase" Length = 317 Back     alignment and structure
>pdb|2QJ3|A Chain A, Mycobacterium Tuberculosis Fabd Length = 322 Back     alignment and structure
>pdb|2QC3|A Chain A, Crystal Structure Of Mcat From Mycobacterium Tuberculosis Length = 303 Back     alignment and structure
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 Back     alignment and structure
>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 Back     alignment and structure
>pdb|4AMO|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|4AMN|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|4AMM|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 401 Back     alignment and structure
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
2c2n_A 339 Malonyl COA-acyl carrier protein transacylase; fat 1e-62
3im9_A 316 MCAT, MCT, malonyl COA-acyl carrier protein transa 2e-48
3qat_A 318 Malonyl COA-acyl carrier protein transacylase; sea 6e-48
3k89_A 314 Malonyl COA-ACP transacylase; bacterial blight, XO 4e-47
1mla_A 309 Malonyl-coenzyme A acyl carrier protein transacyla 5e-47
3ptw_A 336 Malonyl COA-acyl carrier protein transacylase; str 5e-47
2qc3_A 303 MCT, malonyl COA-acyl carrier protein transacylase 6e-47
3tqe_A 316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 9e-47
3im8_A 307 Malonyl acyl carrier protein transacylase; fatty a 1e-45
1nm2_A 317 Malonyl COA:acyl carrier protein malonyltransfera; 1e-45
3ezo_A 318 Malonyl COA-acyl carrier protein transacylase; ssg 3e-45
2h1y_A 321 Malonyl coenzyme A-acyl carrier protein transacyl; 6e-45
3sbm_A 281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 8e-45
2cuy_A 305 Malonyl COA-[acyl carrier protein] transacylase; t 2e-43
3g87_A 394 Malonyl COA-acyl carrier protein transacylase; ssg 2e-43
4amm_A 401 DYNE8; transferase; 1.40A {Micromonospora chersina 7e-21
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 1e-19
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 3e-12
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 3e-07
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 4e-19
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 5e-19
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 2e-13
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 6e-10
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 6e-18
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 7e-16
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 2e-15
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339 Back     alignment and structure
 Score =  199 bits (509), Expect = 1e-62
 Identities = 76/184 (41%), Positives = 106/184 (57%), Gaps = 1/184 (0%)

Query: 87  HYDPRQSQAQHSLRPKTDPRDTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILK 146
           H+                    S+++FPGQG+Q VGMG  L+   P  ++L+  A  +L 
Sbjct: 5   HHHSSGVDLGTENLYFQSMGQCSVLLFPGQGSQVVGMGRGLLN-YPRVRELYAAARRVLG 63

Query: 147 FDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERPAAIENCVATLGFSLGEITA 206
           +DLL+L L GP   L++T+H Q A+FV S+ A+EKL   +P+ IENCVA  GFS+GE  A
Sbjct: 64  YDLLELSLHGPQETLDRTVHCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAA 123

Query: 207 LTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAKEWCVDRG 266
           L F+G  ++   L  +KIR++AMQ A E  P GM SV+  P S+ N A   A+E C   G
Sbjct: 124 LVFAGAMEFAEGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLG 183

Query: 267 IPEP 270
           I  P
Sbjct: 184 IENP 187
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316 Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318 Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314 Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309 Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336 Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303 Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316 Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307 Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317 Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318 Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321 Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281 Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305 Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394 Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query278
3ptw_A 336 Malonyl COA-acyl carrier protein transacylase; str 100.0
2h1y_A 321 Malonyl coenzyme A-acyl carrier protein transacyl; 100.0
3ezo_A 318 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3im8_A 307 Malonyl acyl carrier protein transacylase; fatty a 100.0
3tqe_A 316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 100.0
3k89_A 314 Malonyl COA-ACP transacylase; bacterial blight, XO 100.0
1mla_A 309 Malonyl-coenzyme A acyl carrier protein transacyla 100.0
3qat_A 318 Malonyl COA-acyl carrier protein transacylase; sea 100.0
3tzy_A 491 Polyketide synthase PKS13; acyltransferase, long f 100.0
3im9_A 316 MCAT, MCT, malonyl COA-acyl carrier protein transa 100.0
2qc3_A 303 MCT, malonyl COA-acyl carrier protein transacylase 100.0
2c2n_A 339 Malonyl COA-acyl carrier protein transacylase; fat 100.0
2cuy_A 305 Malonyl COA-[acyl carrier protein] transacylase; t 100.0
1nm2_A 317 Malonyl COA:acyl carrier protein malonyltransfera; 100.0
3sbm_A 281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 100.0
3g87_A 394 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 100.0
4amm_A 401 DYNE8; transferase; 1.40A {Micromonospora chersina 100.0
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 100.0
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 99.98
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 99.97
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 99.96
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 99.95
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
Probab=100.00  E-value=5.5e-43  Score=325.40  Aligned_cols=168  Identities=30%  Similarity=0.499  Sum_probs=157.7

Q ss_pred             CcEEEEeCCCCcChhhhHHHHHhhCchHHHHHHHHHHHhCCCHHHHhhcCCCccchhhhhhhHHHHHHHHHHHHHHHhcC
Q psy11092        107 DTSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREER  186 (278)
Q Consensus       107 ~~vaflFpGqGaq~~gmg~~L~~~~p~~r~~i~~~~~~lg~~l~~~l~~~~~~~l~~~~~~qpai~a~q~a~~~ll~~~~  186 (278)
                      +|++|+|||||+||+|||++||+.+|.||+.+++|++++|+++.+++++++.+.++++.++||++|++|++++++|++  
T Consensus         2 ~kvafvF~GQGsQ~~gMg~~L~~~~p~fr~~~~~~~~~lg~~l~~~~~~~~~~~l~~t~~~Qpai~a~q~al~~ll~~--   79 (336)
T 3ptw_A            2 AKLGFLFAGQGAQYVGMGKEFFDNFEESKEVFKRSSEALGIDMEELCFNDPEGLLNKTEFTQPAIITTNMAILTALDK--   79 (336)
T ss_dssp             CCEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHTSCHHHHHHTCTTSCTTSHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCEEEEECCcccchhhHHHHHHHhCHHHHHHHHHHHHHcCCCHHHHhhCCChhhhcccchHHHHHHHHHHHHHHHHHH--
Confidence            689999999999999999999999999999999999999999999998888888999999999999999999999999  


Q ss_pred             CCccccCcEEEecChhHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhhcCCCCeeEEEecCCHHHHHHHHHhcC--CceEE
Q psy11092        187 PAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACEIAPGGMASVMYGPDSQLNLAMKRAK--EWCVD  264 (278)
Q Consensus       187 p~gi~p~~~v~GhSlGEiaAa~aAG~ls~~da~~lv~~Rg~l~~~~~~~~~G~M~av~~~~~~~v~~~~~~~~--~~v~i  264 (278)
                       +||+| ++++|||+|||+|+|+||+||++|++++++.||++|++......|+|++|.+.+.+.++++|....  +.++|
T Consensus        80 -~Gi~P-~~v~GHSlGE~aAa~~AG~ls~~dal~lv~~Rg~lm~~~~~~~~G~M~AV~~~~~~~v~~~l~~~~~~~~v~i  157 (336)
T 3ptw_A           80 -LGVKS-HISCGLSLGEYSALIHSGAINFEDGVKLVKKRGKFMQEAVAEGIGGMVAVLRMTPEQVDEIIEKSSPYGIVEG  157 (336)
T ss_dssp             -TTCCC-SEEEESTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSSCTTTEEEEEEESCCHHHHHHHHHHHGGGSCEEE
T ss_pred             -cCCCC-CEEEEcCHhHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCHHHHHHHHHhcccCCeEEE
Confidence             78887 999999999999999999999999999999999999997655789999998888889999997653  45999


Q ss_pred             EeeeCCCcEEEecC
Q psy11092        265 RGIPEPELSSISGR  278 (278)
Q Consensus       265 A~~Nsp~~~VisG~  278 (278)
                      |++|+|+++||||+
T Consensus       158 A~~Nsp~~~VisG~  171 (336)
T 3ptw_A          158 ANYNSPGQIVISGE  171 (336)
T ss_dssp             EEEEETTEEEEEEE
T ss_pred             EEEecCCcEEEEcC
Confidence            99999999999995
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 278
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 1e-23
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 1e-20
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

 Score = 94.1 bits (233), Expect = 1e-23
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 112 MFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAV 171
           +FPGQG+Q VGM  D+  + P+ ++ F EASA L +DL  L  +GPA ELNKT   Q A+
Sbjct: 5   VFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPAL 64

Query: 172 FVCSIGALEKLREERPAAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQL 231
              S+      +++     +      G SLGE +AL  +GV D+  A+ L+++R + MQ 
Sbjct: 65  LTASVALYRVWQQQG---GKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQE 121

Query: 232 ACEIAPGGMASVMYGPD 248
           A    P   A +    D
Sbjct: 122 AVPEVPSHCALMKPAAD 138
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query278
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 99.98
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 99.96
d1mlaa270 Probable ACP-binding domain of malonyl-CoA ACP tra 98.51
d1nm2a262 Probable ACP-binding domain of malonyl-CoA ACP tra 98.44
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.3e-32  Score=241.51  Aligned_cols=124  Identities=38%  Similarity=0.598  Sum_probs=115.7

Q ss_pred             cEEEEeCCCCcChhhhHHHHHhhCchHHHHHHHHHHHhCCCHHHHhhcCCCccchhhhhhhHHHHHHHHHHHHHHHhcCC
Q psy11092        108 TSIIMFPGQGTQFVGMGGDLIKTLPMAKDLFEEASAILKFDLLKLCLEGPASELNKTIHAQAAVFVCSIGALEKLREERP  187 (278)
Q Consensus       108 ~vaflFpGqGaq~~gmg~~L~~~~p~~r~~i~~~~~~lg~~l~~~l~~~~~~~l~~~~~~qpai~a~q~a~~~ll~~~~p  187 (278)
                      +++|+|||||+||+|||++|++.+|.||+.+++|++++|+++.+.+...+...+.++.+.||++|++|++++++|++.  
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~~--   78 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQ--   78 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHTSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHhCCCHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHh--
Confidence            489999999999999999999999999999999999999999999888888889999999999999999999999972  


Q ss_pred             CccccCcEEEecChhHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhhc
Q psy11092        188 AAIENCVATLGFSLGEITALTFSGVFDYETALELIKIRSQAMQLACE  234 (278)
Q Consensus       188 ~gi~p~~~v~GhSlGEiaAa~aAG~ls~~da~~lv~~Rg~l~~~~~~  234 (278)
                      .|+.| ++++|||+||++|+|+||+|+++|+++++..||.+|+....
T Consensus        79 ~g~~p-~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~~  124 (235)
T d1mlaa1          79 GGKAP-AMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVP  124 (235)
T ss_dssp             TCCCC-SEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSC
T ss_pred             cCCCc-eeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcCC
Confidence            15555 89999999999999999999999999999999999998753
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure