Psyllid ID: psy110

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MSPSSVTILFFILSCAQGIYSAVKPVPQPGAPNKVNSTNAKPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYNPVG
cccccEEHHHHHHHHcccHHccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccHHHHHHHHHccccccHHHHHHccccccccHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccc
ccccHHHHHHHHHHHHccHHEccccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccccHHHHHccEEEEEEEcccEcccccHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEEEHHHHccHcHHHHHcccccccccHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHcccccccEEEEEccccccccccccccccccccccccc
MSPSSVTILFFILSCAQGiysavkpvpqpgapnkvnstnakprddAFQILQSITangeghqsANVKFLETIKNIESANDILTKLILSekgldmpasaplavprdfkyvptwesldarplpawydeaKVGIFIHWGvfsvpsfrsewfwknwenpnstVTKFMernykpgftyqdfAKDFtaeffdanhWADILASSGAKYVVLTSkhhegytlwpskyafswnsmdigpkrdLVGELATAIRRKYSDIHFGLYHSLYEWfnplyvqdkannfttnqfVTMKTLPELIEIVQKYqpeviwsdgeweapaEYWKSREFLAWLynespvkntvVVNDrwcntclckhggyltcedkynpvg
MSPSSVTILFFILSCAQGIYSAVKPVPQPGAPNKVNSTNAKPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTclckhggyltcedkynpvg
MSPSSVTILFFILSCAQGIYSAVKPVPQPGAPNKVNSTNAKPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYNPVG
*****VTILFFILSCAQGIYSAV*************************ILQ*I********SANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCED******
***SSVT*LFFILSCAQGIYSAVKPVPQPGAPNKVNSTNAKPRDDAFQILQSIT***********KFLETIKNIESANDILTKLILSEKGLD******************WESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYN***
MSPSSVTILFFILSCAQGIYSAVKPVPQPGAPNKVNSTNAKPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYNPVG
***SSVTILFFILSCAQGIYSAVKPVPQPGAPNKV*****KPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYNPVG
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSPSSVTILFFILSCAQGIYSAVKPVPQPGAPNKVNSTNAKPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLAVPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYNPVG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query358 2.2.26 [Sep-21-2011]
C3YWU0 449 Alpha-L-fucosidase OS=Bra yes N/A 0.698 0.556 0.644 4e-96
Q9VTJ4 494 Putative alpha-L-fucosida yes N/A 0.726 0.526 0.608 2e-95
P17164 462 Tissue alpha-L-fucosidase yes N/A 0.692 0.536 0.609 2e-94
Q6AYS4 459 Plasma alpha-L-fucosidase no N/A 0.701 0.546 0.624 4e-94
Q99KR8 461 Plasma alpha-L-fucosidase yes N/A 0.720 0.559 0.607 3e-93
Q2KIM0 468 Tissue alpha-L-fucosidase no N/A 0.729 0.557 0.583 1e-92
P04066 466 Tissue alpha-L-fucosidase yes N/A 0.695 0.534 0.603 1e-92
Q9BTY2 467 Plasma alpha-L-fucosidase no N/A 0.698 0.535 0.619 3e-92
Q99LJ1 452 Tissue alpha-L-fucosidase no N/A 0.695 0.550 0.587 7e-92
Q60HF8 468 Tissue alpha-L-fucosidase N/A N/A 0.695 0.532 0.599 3e-91
>sp|C3YWU0|FUCO_BRAFL Alpha-L-fucosidase OS=Branchiostoma floridae GN=BRAFLDRAFT_56888 PE=3 SV=2 Back     alignment and function desciption
 Score =  351 bits (901), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 163/253 (64%), Positives = 198/253 (78%), Gaps = 3/253 (1%)

Query: 106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNST--VTKFME 163
           +Y PTW+SLD RPLP+WYDEAK GIF+HWGVFSVPSF SEWFW +W+  +    +  FM+
Sbjct: 17  RYAPTWDSLDQRPLPSWYDEAKFGIFMHWGVFSVPSFGSEWFWWDWKGAHDQNFIKDFMK 76

Query: 164 RNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWN 223
           RNY PGF Y DFA  FTAE+++   WA++L +SGAKYVVLTSKHHEG+T WPSKY+++WN
Sbjct: 77  RNYPPGFRYADFAPMFTAEWYNPLQWAEVLQASGAKYVVLTSKHHEGFTNWPSKYSWNWN 136

Query: 224 SMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTL 283
           S+D GP RDLVGELA AIR   SD+HFGLY+SL+EWF+PLY++DK N +TT  +     L
Sbjct: 137 SVDNGPHRDLVGELAMAIRNN-SDLHFGLYYSLFEWFHPLYLKDKQNKWTTQDYTKDVGL 195

Query: 284 PELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCK 343
            EL E+V  Y PEV+WSDG+WEAP  YW S  FLAWLYN+SPVK+TVV NDRW +  LC 
Sbjct: 196 AELYELVNAYHPEVVWSDGDWEAPYTYWNSTNFLAWLYNDSPVKDTVVTNDRWGSGMLCH 255

Query: 344 HGGYLTCEDKYNP 356
           HGGY TC D+YNP
Sbjct: 256 HGGYYTCSDRYNP 268
Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
Branchiostoma floridae (taxid: 7739)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 1
>sp|Q9VTJ4|FUCO_DROME Putative alpha-L-fucosidase OS=Drosophila melanogaster GN=Fuca PE=2 SV=2 Back     alignment and function description
>sp|P17164|FUCO_RAT Tissue alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca1 PE=1 SV=1 Back     alignment and function description
>sp|Q6AYS4|FUCO2_RAT Plasma alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca2 PE=2 SV=1 Back     alignment and function description
>sp|Q99KR8|FUCO2_MOUSE Plasma alpha-L-fucosidase OS=Mus musculus GN=Fuca2 PE=2 SV=1 Back     alignment and function description
>sp|Q2KIM0|FUCO_BOVIN Tissue alpha-L-fucosidase OS=Bos taurus GN=FUCA1 PE=2 SV=1 Back     alignment and function description
>sp|P04066|FUCO_HUMAN Tissue alpha-L-fucosidase OS=Homo sapiens GN=FUCA1 PE=1 SV=4 Back     alignment and function description
>sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens GN=FUCA2 PE=1 SV=2 Back     alignment and function description
>sp|Q99LJ1|FUCO_MOUSE Tissue alpha-L-fucosidase OS=Mus musculus GN=Fuca1 PE=2 SV=1 Back     alignment and function description
>sp|Q60HF8|FUCO_MACFA Tissue alpha-L-fucosidase OS=Macaca fascicularis GN=FUCA1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
322795129 943 hypothetical protein SINV_07990 [Solenop 0.840 0.319 0.618 1e-110
156555352 477 PREDICTED: alpha-L-fucosidase-like [Naso 0.745 0.559 0.664 1e-106
332024348 468 Plasma alpha-L-fucosidase [Acromyrmex ec 0.695 0.532 0.693 1e-105
307214345 469 Plasma alpha-L-fucosidase [Harpegnathos 0.698 0.533 0.687 1e-104
350420640 474 PREDICTED: alpha-L-fucosidase-like [Bomb 0.698 0.527 0.687 1e-104
242023020435 Plasma alpha-L-fucosidase precursor, put 0.698 0.574 0.678 1e-103
321469420450 hypothetical protein DAPPUDRAFT_318578 [ 0.751 0.597 0.638 1e-103
390350281 460 PREDICTED: alpha-L-fucosidase-like [Stro 0.717 0.558 0.691 1e-103
391346731 465 PREDICTED: putative alpha-L-fucosidase-l 0.748 0.576 0.637 1e-102
383858613 470 PREDICTED: alpha-L-fucosidase-like [Mega 0.695 0.529 0.674 1e-101
>gi|322795129|gb|EFZ17969.1| hypothetical protein SINV_07990 [Solenopsis invicta] Back     alignment and taxonomy information
 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/320 (61%), Positives = 239/320 (74%), Gaps = 19/320 (5%)

Query: 41  KPRDDAFQILQSITANGEGHQSANVKFLETIKNIESANDILTKLILSEKGLDMPASAPLA 100
           K  D+  +I  S+ AN    Q A V     +K + +  +++ +    EK + +   AP  
Sbjct: 422 KQSDNVLEI--SLPANAHKGQPAWV-----LKMVHAHYNVIVRTDEEEKFMSILTKAP-- 472

Query: 101 VPRDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVT- 159
                KY PTW SLD+RPLPAWYDEAK GIFIHWGVFSVPSF SEWFW NW++ N T + 
Sbjct: 473 -----KYDPTWSSLDSRPLPAWYDEAKFGIFIHWGVFSVPSFGSEWFWNNWKDENITKST 527

Query: 160 ---KFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPS 216
               FM++ Y P FTYQDF +DFTAEFF+A  WA++  +SGAKY+VLTSKHHEGYTLWPS
Sbjct: 528 KYFDFMKQRYPPNFTYQDFGRDFTAEFFNAAEWAELFKASGAKYIVLTSKHHEGYTLWPS 587

Query: 217 KYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQ 276
           KY+FSWNSMD+GP++DLVGELA AIR K +DI FGLYHSLYEW+NPLYV DK NNFTTN+
Sbjct: 588 KYSFSWNSMDVGPQKDLVGELAQAIRNK-TDIKFGLYHSLYEWYNPLYVTDKKNNFTTNR 646

Query: 277 FVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRW 336
           FVT K +PEL E+V+ Y+PEV+WSDG+WEA   YWKS+EFLAWLYNESPVK+TVVVNDRW
Sbjct: 647 FVTHKIIPELQELVETYKPEVVWSDGDWEATDSYWKSKEFLAWLYNESPVKDTVVVNDRW 706

Query: 337 CNTCLCKHGGYLTCEDKYNP 356
                C HGGY TC D++NP
Sbjct: 707 GINMSCHHGGYFTCTDRFNP 726

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|156555352|ref|XP_001604815.1| PREDICTED: alpha-L-fucosidase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|332024348|gb|EGI64547.1| Plasma alpha-L-fucosidase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307214345|gb|EFN89423.1| Plasma alpha-L-fucosidase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350420640|ref|XP_003492575.1| PREDICTED: alpha-L-fucosidase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|242023020|ref|XP_002431934.1| Plasma alpha-L-fucosidase precursor, putative [Pediculus humanus corporis] gi|212517285|gb|EEB19196.1| Plasma alpha-L-fucosidase precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|321469420|gb|EFX80400.1| hypothetical protein DAPPUDRAFT_318578 [Daphnia pulex] Back     alignment and taxonomy information
>gi|390350281|ref|XP_796773.3| PREDICTED: alpha-L-fucosidase-like [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|391346731|ref|XP_003747622.1| PREDICTED: putative alpha-L-fucosidase-like [Metaseiulus occidentalis] Back     alignment and taxonomy information
>gi|383858613|ref|XP_003704794.1| PREDICTED: alpha-L-fucosidase-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
ZFIN|ZDB-GENE-030131-7434 451 fuca1 "fucosidase, alpha-L- 1, 0.695 0.552 0.630 4.2e-95
UNIPROTKB|F1N5H2 468 FUCA2 "Uncharacterized protein 0.729 0.557 0.617 2.3e-94
ZFIN|ZDB-GENE-040801-78 451 zgc:101116 "zgc:101116" [Danio 0.695 0.552 0.615 3e-94
RGD|2636 462 Fuca1 "fucosidase, alpha-L- 1, 0.731 0.567 0.588 4.8e-94
ZFIN|ZDB-GENE-040822-39 453 fuca2 "fucosidase, alpha-L- 2, 0.698 0.551 0.615 1e-93
FB|FBgn0036169 494 Fuca "alpha-L-fucosidase" [Dro 0.706 0.512 0.621 1.3e-93
RGD|1303053 459 Fuca2 "fucosidase, alpha-L- 2, 0.695 0.542 0.629 2.7e-93
UNIPROTKB|F1S715 467 FUCA2 "Uncharacterized protein 0.698 0.535 0.634 4.3e-93
MGI|MGI:1914098 461 Fuca2 "fucosidase, alpha-L- 2, 0.734 0.570 0.6 9e-93
UNIPROTKB|Q2KIM0 468 FUCA1 "Tissue alpha-L-fucosida 0.759 0.581 0.563 1.9e-92
ZFIN|ZDB-GENE-030131-7434 fuca1 "fucosidase, alpha-L- 1, tissue" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
 Identities = 159/252 (63%), Positives = 195/252 (77%)

Query:   106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENP-NSTVTKFMER 164
             +Y P W SLD+RPLP WYDE K GIF+HWGVFSVP+F SEWFW  W+   N    +FM +
Sbjct:    24 RYTPDWTSLDSRPLPGWYDEVKFGIFVHWGVFSVPAFGSEWFWWYWKGAQNPDYVQFMIK 83

Query:   165 NYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNS 224
             NY PGF+Y DFA +F A+FFD + WADI  +SGAKYVVLTSKHHEG+T W S  +++WNS
Sbjct:    84 NYPPGFSYADFAPNFHAQFFDPDAWADIFEASGAKYVVLTSKHHEGFTNWGSPTSWNWNS 143

Query:   225 MDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTMKTLP 284
             +D GP RDLVG+L  AIR+K   +H+GLYHSLYEWFNPLY+ DK + F T ++V  K +P
Sbjct:   144 VDDGPHRDLVGDLGNAIRKK--GLHYGLYHSLYEWFNPLYLSDKQSGFKTQEYVARKAMP 201

Query:   285 ELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCLCKH 344
             EL ++V +Y+P++IWSDG+WEAP  YW S EFLAWLYN+SPVK+ VVVNDRW N C CKH
Sbjct:   202 ELYDLVSRYKPDLIWSDGDWEAPDTYWNSTEFLAWLYNDSPVKDIVVVNDRWGNGCYCKH 261

Query:   345 GGYLTCEDKYNP 356
             GGY  C DK+NP
Sbjct:   262 GGYYNCADKFNP 273
GO:0004560 "alpha-L-fucosidase activity" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006004 "fucose metabolic process" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
UNIPROTKB|F1N5H2 FUCA2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-78 zgc:101116 "zgc:101116" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|2636 Fuca1 "fucosidase, alpha-L- 1, tissue" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040822-39 fuca2 "fucosidase, alpha-L- 2, plasma" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0036169 Fuca "alpha-L-fucosidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1303053 Fuca2 "fucosidase, alpha-L- 2, plasma" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1S715 FUCA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1914098 Fuca2 "fucosidase, alpha-L- 2, plasma" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KIM0 FUCA1 "Tissue alpha-L-fucosidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P17164FUCO_RAT3, ., 2, ., 1, ., 5, 10.60950.69270.5367yesN/A
Q5RFI5FUCO2_PONAB3, ., 2, ., 1, ., 5, 10.61110.69830.5376yesN/A
P04066FUCO_HUMAN3, ., 2, ., 1, ., 5, 10.60310.69550.5343yesN/A
Q99KR8FUCO2_MOUSE3, ., 2, ., 1, ., 5, 10.60760.72060.5596yesN/A
P48300FUCO_CANFA3, ., 2, ., 1, ., 5, 10.57930.69550.5354yesN/A
P10901FUCO_DICDI3, ., 2, ., 1, ., 5, 10.50380.69550.5401yesN/A
P49713FUCO_CAEEL3, ., 2, ., 1, ., 5, 10.57530.68710.5103yesN/A
Q9VTJ4FUCO_DROME3, ., 2, ., 1, ., 5, 10.60830.72620.5263yesN/A
C3YWU0FUCO_BRAFL3, ., 2, ., 1, ., 5, 10.64420.69830.5567yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.510.824
3rd Layer3.2.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
smart00812 384 smart00812, Alpha_L_fucos, Alpha-L-fucosidase 1e-131
pfam01120320 pfam01120, Alpha_L_fucos, Alpha-L-fucosidase 4e-96
COG3669 430 COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate 5e-33
>gnl|CDD|214829 smart00812, Alpha_L_fucos, Alpha-L-fucosidase Back     alignment and domain information 
 Score =  379 bits (975), Expect = e-131
 Identities = 144/257 (56%), Positives = 181/257 (70%), Gaps = 14/257 (5%)

Query: 106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERN 165
            Y PTWESLD RPLP W+ +AK GIFIHWGV+SVP F  EW+W+      S   K   +N
Sbjct: 6   PYQPTWESLDKRPLPEWFRDAKFGIFIHWGVYSVPGFGGEWYWRQP---GSPEYKHHIKN 62

Query: 166 YKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSM 225
           Y P F Y+DFA  FTAE FD   WAD+   +GAKYVVLT+KHH+G+ LW SKY+ +WN++
Sbjct: 63  YGPEFGYKDFAPQFTAEKFDPEEWADLFKKAGAKYVVLTTKHHDGFCLWDSKYS-NWNAV 121

Query: 226 DIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQ------DKANNFTTNQFVT 279
           D GPKRDLVGELA A+R++   + FGLYHSL++WFNPLY        D  N     +FV 
Sbjct: 122 DTGPKRDLVGELADAVRKR--GLKFGLYHSLFDWFNPLYAGPTSSDEDSDNWPRFQEFV- 178

Query: 280 MKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNT 339
              LP+L E+V +Y+P+++W DG WEAP +YW+S+EFLAWLYN SPVK+TVVVNDRW   
Sbjct: 179 DDWLPQLRELVTRYKPDLLWFDGGWEAPDDYWRSKEFLAWLYNLSPVKDTVVVNDRWGG- 237

Query: 340 CLCKHGGYLTCEDKYNP 356
             CKHGG+ T E++  P
Sbjct: 238 TGCKHGGFYTDEERGAP 254

O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. Length = 384
>gnl|CDD|216307 pfam01120, Alpha_L_fucos, Alpha-L-fucosidase Back     alignment and domain information
>gnl|CDD|226195 COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 358
KOG3340|consensus 454 100.0
smart00812 384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 100.0
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 100.0
COG3669 430 Alpha-L-fucosidase [Carbohydrate transport and met 100.0
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 99.73
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.07
PF14488166 DUF4434: Domain of unknown function (DUF4434) 97.52
COG1649 418 Uncharacterized protein conserved in bacteria [Fun 96.43
PF02065 394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 95.05
COG3669 430 Alpha-L-fucosidase [Carbohydrate transport and met 93.1
PF00834201 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase fam 92.05
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 91.41
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 90.78
PF01055 441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 90.23
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 90.17
cd06595292 GH31_xylosidase_XylS-like This family represents a 89.88
PRK08091228 ribulose-phosphate 3-epimerase; Validated 88.53
PRK08005210 epimerase; Validated 88.08
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 87.64
KOG3111|consensus224 85.85
TIGR02402 542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 85.63
PF13200 316 DUF4015: Putative glycosyl hydrolase domain 84.82
PF04476235 DUF556: Protein of unknown function (DUF556); Inte 83.93
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 83.7
COG0036220 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate 83.44
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 81.94
>KOG3340|consensus Back     alignment and domain information 
Probab=100.00  E-value=1e-85  Score=636.28  Aligned_cols=253  Identities=67%  Similarity=1.335  Sum_probs=247.5

Q ss_pred             CCCCCCCCCcccCCCCChhhhhcCceEEEEecCCCccCCCCCcccccccCCCC-hhHHHHHHHhcCCCCchhhhhcCCCC
Q psy110          103 RDFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPN-STVTKFMERNYKPGFTYQDFAKDFTA  181 (358)
Q Consensus       103 ~~~~y~p~weSL~~~~~P~WF~DAKfGiFIHWG~ySvp~~g~EWy~~~~~g~~-~~y~~~~~~~y~p~~~Y~dfa~~Fnp  181 (358)
                      ...+|+|+|+||+.||+|.||+|||||||+|||+||+|.+|+||+|.+|++.. +.|..|++++|+|.|.|+||+++|+|
T Consensus        20 p~tryqp~w~Sld~RPlP~w~d~akfgiflhWgv~Svp~~gSEWfWw~Wk~~~~P~yv~Fmd~ny~P~fty~df~~~Fta   99 (454)
T KOG3340|consen   20 PRTRYQPDWESLDLRPLPAWYDDAKFGIFLHWGVYSVPSFGSEWFWWYWKGEFGPKYVTFMDDNYKPGFTYADFASQFTA   99 (454)
T ss_pred             CccccCCCchhhccCCCCcccccCcceeEEEeeeeecccccchhhhhhhhccCCCceeeeccccCCCCCchhhchhhhhh
Confidence            34789999999999999999999999999999999999999999999999876 77999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHcCCcEEEEeeeccCCCccCCCCCCCCccccCCCCCCChHHHHHHHHHhhcCCceEEEeeCcccccC
Q psy110          182 EFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFN  261 (358)
Q Consensus       182 ~~FDpdeWa~lak~AGAKYvVlTaKHHDGFaLWdSk~t~~~ns~~~gpkRDlV~Ela~A~Rk~~~GLk~GlYyS~~DW~~  261 (358)
                      +.|+|.|||+++|++||||||||+|||||||||||++|.+|||++.|||||||+||+.|+||+  |||||+|||+++|+|
T Consensus       100 ~~fnA~qWa~lfq~sGaryvVLTsKHHeGFtlWPS~~SwnwNS~dvgpkrDiV~EL~~A~rk~--dirfGLY~SlfEwfh  177 (454)
T KOG3340|consen  100 TLFNASQWADLFQDSGARYVVLTSKHHEGFTLWPSEYSWNWNSMDVGPKRDIVGELASAIRKR--DIRFGLYYSLFEWFH  177 (454)
T ss_pred             hhcCHHHHHHHHHhcCceEEEEeecccCceecCCCcCcccccccccCccccHHHHHHHHHHhc--CcceeEeecHHHhhc
Confidence            999999999999999999999999999999999999999999999999999999999999999  999999999999999


Q ss_pred             ccccCccCCCCCchHHhhhhhHHHHHHHHhcCCCCEEEEeCCCCCCccccChHHHHHHHHhcCCCCCcEEEecccCCCCC
Q psy110          262 PLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLYNESPVKNTVVVNDRWCNTCL  341 (358)
Q Consensus       262 p~y~~d~~~~~~~~~y~~~~~~~Ql~ELi~rY~PDilWfDg~w~~p~~~~~~~e~~a~~yn~~~~~~~VvvNdR~g~~~~  341 (358)
                      |.|..|+.+.+.++.|++++.++|+.||+++|.|++||.||.|+.|+.||++.+|+||+||.+|++++||||||||.|+.
T Consensus       178 plyl~d~~~~f~~~~f~~~k~lpem~eLVtkY~PeviWSDGew~~pd~YW~s~~FlaWLYN~SPVkd~VV~NDRWG~gt~  257 (454)
T KOG3340|consen  178 PLYLDDKKHLFNTQHFPEEKTLPEMYELVTKYNPEVIWSDGEWEAPDDYWNSTEFLAWLYNDSPVKDTVVVNDRWGTGTM  257 (454)
T ss_pred             hhhccchhhcccccccchhcchHHHHHHHHhcCCceEeeCCCcCCchhhhchhhhHHHhhcCCCccceEEecccccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCCC
Q psy110          342 CKHGGYLTCEDKYNPV  357 (358)
Q Consensus       342 ~~hgd~~t~~d~~~p~  357 (358)
                      |+|||||||+|||+|+
T Consensus       258 c~HGgfy~csD~~~Pg  273 (454)
T KOG3340|consen  258 CKHGGFYTCSDRYNPG  273 (454)
T ss_pred             cccCCeeeccccCCCc
Confidence            9999999999999997

>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3669 Alpha-L-fucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3669 Alpha-L-fucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5 Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PRK08091 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PRK08005 epimerase; Validated Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>KOG3111|consensus Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF04476 DUF556: Protein of unknown function (DUF556); InterPro: IPR007565 The proteins in this entry are functionally uncharacterised Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
1hl8_A 449 Crystal Structure Of Thermotoga Maritima Alpha-Fuco 2e-35
2zwy_A 455 Alpha-L-Fucosidase Length = 455 2e-35
1odu_A 449 Crystal Structure Of Thermotoga Maritima Alpha-Fuco 2e-35
2wsp_A 449 Thermotoga Maritima Alpha-L-Fucosynthase, Tmd224g, 1e-34
2wvt_A 443 Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro 8e-20
2xib_A 453 Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro 8e-20
2wvv_B 450 Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro 8e-20
2wvs_A 443 Crystal Structure Of An Alpha-L-Fucosidase Gh29 Tra 8e-20
2wvv_A 450 Crystal Structure Of An Alpha-L-Fucosidase Gh29 Fro 8e-20
3mo4_A 480 The Crystal Structure Of An Alpha-(1-3,4)-Fucosidas 5e-09
3ues_A 478 Crystal Structure Of Alpha-1,34-Fucosidase From Bif 5e-09
3uet_A 478 Crystal Structure Of Alpha-1,34-Fucosidase From Bif 2e-08
3eyp_A 469 Crystal Structure Of Putative Alpha-L-Fucosidase Fr 1e-05
>pdb|1HL8|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase Length = 449 Back     alignment and structure 
Iteration: 1

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 140/256 (54%), Gaps = 32/256 (12%)
Query: 106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRS-----------EWFWKN---- 150
           +Y P WESL    +P W+D+AK GIFIHWG++SVP + +            WF++N    
Sbjct: 7   RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAE 66
Query: 151 -WENP----NSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTS 205
            +EN      S   ++  + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+
Sbjct: 67  WYENSLRIKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTT 126
Query: 206 KHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHS-LYEW---FN 261
           KHH+G+ LW +KY   +NS+  GPKRDLVG+LA A+R   + + FG+Y+S   +W     
Sbjct: 127 KHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVRE--AGLRFGVYYSGGLDWRFTTE 183
Query: 262 PLYVQDKANNFTTNQFVTMK-TLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWL 320
           P+   +  +    N +        +++E+V  Y P+V+W+D  W    +    +   A+ 
Sbjct: 184 PIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKE-DLKYLFAYY 242
Query: 321 YNESPVKNTVVVNDRW 336
           YN+ P  +   VNDRW
Sbjct: 243 YNKHPEGS---VNDRW 255
>pdb|2ZWY|A Chain A, Alpha-L-Fucosidase Length = 455 Back     alignment and structure
>pdb|1ODU|A Chain A, Crystal Structure Of Thermotoga Maritima Alpha-Fucosidase In Complex With Fucose Length = 449 Back     alignment and structure
>pdb|2WSP|A Chain A, Thermotoga Maritima Alpha-L-Fucosynthase, Tmd224g, In Complex With Alpha-L-Fuc-(1-2)-Beta-L-Fuc-N3 Length = 449 Back     alignment and structure
>pdb|2WVT|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron In Complex With A Novel Iminosugar Fucosidase Inhibitor Length = 443 Back     alignment and structure
>pdb|2XIB|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron In Complex With Deoxyfuconojirimycin Length = 453 Back     alignment and structure
>pdb|2WVV|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron Length = 450 Back     alignment and structure
>pdb|2WVS|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped Covalent Intermediate From Bacteroides Thetaiotaomicron In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q Mutant Length = 443 Back     alignment and structure
>pdb|2WVV|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bacteroides Thetaiotaomicron Length = 450 Back     alignment and structure
>pdb|3MO4|A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 Length = 480 Back     alignment and structure
>pdb|3UES|A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin Length = 478 Back     alignment and structure
>pdb|3UET|A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii Length = 478 Back     alignment and structure
>pdb|3EYP|A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron Length = 469 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
2wvv_A 450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 1e-95
2zxd_A 455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 8e-69
3gza_A 443 Putative alpha-L-fucosidase; NP_812709.1, structur 8e-54
3eyp_A 469 Putative alpha-L-fucosidase; structural genomics, 4e-51
3ues_A 478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 5e-45
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Length = 450 Back     alignment and structure
 Score =  290 bits (745), Expect = 1e-95
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 19/262 (7%)

Query: 106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRSEWFWKNWENPNSTVTKFMERN 165
           KY  T E     P    + + ++G FIHWG++++P    EW  K +      +       
Sbjct: 5   KYGATNEGKRQDPAMQKFRDNRLGAFIHWGLYAIPG--GEWNGKVYGGAAEWL---KSWA 59

Query: 166 YKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSM 225
             P   +      +    FDA  WA +    G KYV +T+KHHEG+ LWPSKY   +   
Sbjct: 60  KVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVA 118

Query: 226 DIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFNPLYVQDKANNFTTNQFVTM--KTL 283
           +   KRD++GEL  A   +   I    Y S+ +W NP Y  D  +   +  F      T 
Sbjct: 119 NTPYKRDILGELVKAYNDE--GIDVHFYFSVMDWSNPDYRYDIKSKEDSIAFSRFLEFTD 176

Query: 284 PELIEIVQKYQP-EVIWSDGEWEAPAEY-----WKSREFLAWLYNESPVKNTVVVNDRWC 337
            +L E+  +Y   +  W DG W+A  +        + + L  L     + + +  +D+  
Sbjct: 177 NQLKELATRYPTVKDFWFDGTWDASVKKNGWWTAHAEQMLKELVPGVAINSRLRADDKGK 236

Query: 338 NTCLCK---HGGYLTCEDKYNP 356
                     G Y +  ++  P
Sbjct: 237 RHFDSNGRLMGDYESGYERRLP 258
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Length = 455 Back     alignment and structure
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Length = 443 Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Length = 469 Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Length = 478 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
2zxd_A 455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 100.0
2wvv_A 450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 100.0
3gza_A 443 Putative alpha-L-fucosidase; NP_812709.1, structur 100.0
3ues_A 478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 100.0
3eyp_A 469 Putative alpha-L-fucosidase; structural genomics, 100.0
4h41_A 340 Putative alpha-L-fucosidase; hydrolase, carbohydra 99.75
4fnq_A 729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 96.65
2yfo_A 720 Alpha-galactosidase-sucrose kinase agask; hydrolas 96.37
3mi6_A 745 Alpha-galactosidase; NESG, structural genomics, PS 96.01
2xn2_A 732 Alpha-galactosidase; hydrolase, glycosidase; HET: 95.69
1zy9_A 564 Alpha-galactosidase; TM1192, struc genomics, joint 95.07
3vup_A 351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 88.12
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 86.47
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 85.84
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 85.3
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 84.83
1uas_A 362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 83.77
3cc1_A 433 BH1870 protein, putative alpha-N-acetylgalactosami 83.01
3dhu_A 449 Alpha-amylase; structural genomics, hydrolase, gly 82.52
1ea9_C 583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 82.49
4do4_A 400 Alpha-N-acetylgalactosaminidase; pharmacological c 82.43
1ht6_A 405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 81.65
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 81.26
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-76  Score=596.50  Aligned_cols=241  Identities=38%  Similarity=0.754  Sum_probs=215.6

Q ss_pred             CCCCCCCCcccCCCCChhhhhcCceEEEEecCCCccCCCCC--------------------cccccccCCCChhHHHHHH
Q psy110          104 DFKYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFRS--------------------EWFWKNWENPNSTVTKFME  163 (358)
Q Consensus       104 ~~~y~p~weSL~~~~~P~WF~DAKfGiFIHWG~ySvp~~g~--------------------EWy~~~~~g~~~~y~~~~~  163 (358)
                      .++|+|+|+||++|++|+||+|||||||||||+|||||+++                    |||+..++..+.++.+||+
T Consensus         5 ~~~y~p~w~sl~~~~~p~Wf~daKfGiFiHWG~ySvp~~~~~~~~~~~~~~~~w~~~~~yaEW~~~~~~~~~~~~~~~~~   84 (455)
T 2zxd_A            5 KPRYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAEWYENSLRIKESPTWEYHV   84 (455)
T ss_dssp             --CCCSSHHHHTTCCCCHHHHHHCEEEEECCSGGGTTCCCCCCCCTTTSCTTTGGGGCCCGGGHHHHHHSTTSHHHHHHH
T ss_pred             CCCCCCCchhhccccChhHHhhCCEEEEEEeccccccccccccccccccccccccccCchHHHHHHhccCCCChHHHHHH
Confidence            35899999999999999999999999999999999999986                    9997666555567789999


Q ss_pred             HhcCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCcEEEEeeeccCCCccCCCCCCCCccccCCCCCCChHHHHHHHHHh
Q psy110          164 RNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRR  243 (358)
Q Consensus       164 ~~y~p~~~Y~dfa~~Fnp~~FDpdeWa~lak~AGAKYvVlTaKHHDGFaLWdSk~t~~~ns~~~gpkRDlV~Ela~A~Rk  243 (358)
                      ++|+++++|+||+++|||++|||++||++||+|||||+|||||||||||||||++| +||+++++||||||+||++||||
T Consensus        85 ~~yg~~~~Y~d~~~~F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t-~~ns~~~~pkrDlv~El~~A~rk  163 (455)
T 2zxd_A           85 KTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVRE  163 (455)
T ss_dssp             HHTCTTCCGGGHHHHCCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSC-SCBTTTSTTCSCHHHHHHHHHHH
T ss_pred             hhcCCCccHHHHHhhCCcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCC-CCcccccCCCCChHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             hcCCceEEEeeC-cccccCc-cccCccCCCCCc---hHHhhhhhHHHHHHHHhcCCCCEEEEeCCCCCCccc-cChHHHH
Q psy110          244 KYSDIHFGLYHS-LYEWFNP-LYVQDKANNFTT---NQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEY-WKSREFL  317 (358)
Q Consensus       244 ~~~GLk~GlYyS-~~DW~~p-~y~~d~~~~~~~---~~y~~~~~~~Ql~ELi~rY~PDilWfDg~w~~p~~~-~~~~e~~  317 (358)
                      +  |||||+||| .+||++| .|..+....|..   .+++.+++++||+||+++|+||+|||||+|.  ... |+..+|+
T Consensus       164 ~--Glk~GlY~S~~~dW~~p~~~~~~~~~~y~~~~~~~~y~~~~~~Ql~ELlt~Y~pd~lWfDg~~~--~~~~w~~~~~~  239 (455)
T 2zxd_A          164 A--GLRFGVYYSGGLDWRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWP--EKGKEDLKYLF  239 (455)
T ss_dssp             T--TCEEEEEEECSCCGGGCCSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSEEEEESCCC--GGGTTHHHHHH
T ss_pred             c--CCeEEEEecCCccccCcccccccccccccCCCccHHHHHHHHHHHHHHHhhcCCcEEEECCCCC--ccchhhHHHHH
Confidence            9  999999999 8999999 666554433332   3445789999999999999999999999983  445 8899999


Q ss_pred             HHHHhcCCCCCcEEEecccCCCCCCCCCCccCCCCCCC-C
Q psy110          318 AWLYNESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYN-P  356 (358)
Q Consensus       318 a~~yn~~~~~~~VvvNdR~g~~~~~~hgd~~t~~d~~~-p  356 (358)
                      +++|+.+   |+||||+|||    +.+|||+|+++++. |
T Consensus       240 ~~~~~~~---P~~vvn~R~g----~~~gd~~t~e~~~~~~  272 (455)
T 2zxd_A          240 AYYYNKH---PEGSVNDRWG----VPHWDFKTAEYHVNYP  272 (455)
T ss_dssp             HHHHHHC---TTCCBCSCSS----SSCCSSEEEBTTBBCC
T ss_pred             HHHHHhC---CCEEEEcccC----CCcccccccccccCCc
Confidence            9999965   5899999997    46899999998875 5
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 358
d1hl9a2350 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, ca 1e-65
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 350 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Putative alpha-L-fucosidase, catalytic domain
domain: Putative alpha-L-fucosidase, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score =  209 bits (533), Expect = 1e-65
 Identities = 91/277 (32%), Positives = 132/277 (47%), Gaps = 34/277 (12%)

Query: 106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSF--------------------RSE 145
           +Y P WESL    +P W+D+AK GIFIHWG++SVP +                     +E
Sbjct: 1   RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAE 60

Query: 146 WFWKNWENPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTS 205
           W+  +     S   ++  + Y   F Y+ FA  FTAE +D   WAD+   +GAKYV+ T+
Sbjct: 61  WYENSLRIKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTT 120

Query: 206 KHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKYSDIHFGLYHSLYEWFN---- 261
           KHH+G+ LW +KY   +NS+  GPKRDLVG+LA A+ R+        Y    +W      
Sbjct: 121 KHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAV-REAGLRFGVYYSGGLDWRFTTEP 178

Query: 262 PLYVQDKANNFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAWLY 321
             Y +D +               +++E+V  Y P+V+W+D  W         +   A+ Y
Sbjct: 179 IRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKG-KEDLKYLFAYYY 237

Query: 322 NESPVKNTVVVNDRWCNTCLCKHGGYLTCEDKYNPVG 358
           N+ P      VNDRW       H  + T E   N  G
Sbjct: 238 NKHPE---GSVNDRWG----VPHWDFKTAEYHVNYPG 267

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 100.0
d1zy9a2 348 Alpha-galactosidase GalA catalytic domain {Thermot 93.78
d1eh9a3 400 Glycosyltrehalose trehalohydrolase, central domain 92.79
d1kwga2 393 A4 beta-galactosidase {Thermus thermophilus [TaxId 91.98
d2vzsa5 339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 91.31
d2guya2 381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 90.98
d2aaaa2 381 Fungal alpha-amylases {Aspergillus niger, acid amy 89.75
d2bhua3 420 Glycosyltrehalose trehalohydrolase, central domain 84.76
d1m7xa3 396 1,4-alpha-glucan branching enzyme, central domain 83.56
d2flia1217 D-ribulose-5-phosphate 3-epimerase {Streptococcus 83.54
d1gcya2 357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 82.85
d1qnra_ 344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 81.8
d1h3ga3 422 Cyclomaltodextrinase, central domain {Flavobacteri 81.51
d1j0ha3 382 Neopullulanase, central domain {Bacillus stearothe 80.89
d1h1ya_220 D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sa 80.77
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Putative alpha-L-fucosidase, catalytic domain
domain: Putative alpha-L-fucosidase, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.4e-73  Score=552.76  Aligned_cols=235  Identities=38%  Similarity=0.776  Sum_probs=202.9

Q ss_pred             CCCCCCcccCCCCChhhhhcCceEEEEecCCCccCCCC--------------------CcccccccCCCChhHHHHHHHh
Q psy110          106 KYVPTWESLDARPLPAWYDEAKVGIFIHWGVFSVPSFR--------------------SEWFWKNWENPNSTVTKFMERN  165 (358)
Q Consensus       106 ~y~p~weSL~~~~~P~WF~DAKfGiFIHWG~ySvp~~g--------------------~EWy~~~~~g~~~~y~~~~~~~  165 (358)
                      +|+|+||||++|++|+||+|||||||||||+|||||++                    +|||...++..++++.+||.++
T Consensus         1 ~y~p~w~sl~~~~~p~Wf~dakfGmFiHWG~YSvp~~~~~~~~~~~~~~~~~~~~~~~~EW~~~~~~~~~~~~~~~h~~~   80 (350)
T d1hl9a2           1 RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAEWYENSLRIKESPTWEYHVKT   80 (350)
T ss_dssp             CCCSSHHHHTTSCCCHHHHHHCEEEEECCSGGGTTCCCCC---------CCTTTTCCCGGGHHHHHHSTTSHHHHHHHHH
T ss_pred             CCCCCcHHHhCCCChhHHhcCceEEEEEeccccccccCCCcccccccccccccccCCchHHhhhhccCCCCcchhhhhhc
Confidence            59999999999999999999999999999999999864                    3888655555556777999999


Q ss_pred             cCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCcEEEEeeeccCCCccCCCCCCCCccccCCCCCCChHHHHHHHHHhhc
Q psy110          166 YKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVGELATAIRRKY  245 (358)
Q Consensus       166 y~p~~~Y~dfa~~Fnp~~FDpdeWa~lak~AGAKYvVlTaKHHDGFaLWdSk~t~~~ns~~~gpkRDlV~Ela~A~Rk~~  245 (358)
                      |+++++|++|+++|||++|||++||++||+|||||+|||||||||||||||++| +||+++++|+||||+||++||||+ 
T Consensus        81 yg~~~~Y~~~~~~Fnp~~fDa~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~t-~~n~~~~~~~rDiv~el~~A~rk~-  158 (350)
T d1hl9a2          81 YGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREA-  158 (350)
T ss_dssp             TCTTCCGGGHHHHCCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSC-SCBTTTSTTCSCHHHHHHHHHHHT-
T ss_pred             CCCCccHHHHHHHhhcccCCHHHHHHHHHHcCCCEEEEEEEecCCcccCCCCCC-CCCCcCCCCCCchHHHHHHHHHhc-
Confidence            999999999999999999999999999999999999999999999999999999 999999999999999999999999 


Q ss_pred             CCceEEEeeCc-ccccCccccCcc----CC-CCCchHHhhhhhHHHHHHHHhcCCCCEEEEeCCCCCCccccChHHHHHH
Q psy110          246 SDIHFGLYHSL-YEWFNPLYVQDK----AN-NFTTNQFVTMKTLPELIEIVQKYQPEVIWSDGEWEAPAEYWKSREFLAW  319 (358)
Q Consensus       246 ~GLk~GlYyS~-~DW~~p~y~~d~----~~-~~~~~~y~~~~~~~Ql~ELi~rY~PDilWfDg~w~~p~~~~~~~e~~a~  319 (358)
                       |||||+|||. .||+++.+....    .. ......| .+++.+||+||+++|+||+||||++|... ..++..+++++
T Consensus       159 -Glk~G~YyS~~~dw~~~~~~~~~~~~~~~~~~~~~~y-~~~~~~Ql~EL~~~Y~p~~~w~D~~~~~~-~~~~~~~~~~~  235 (350)
T d1hl9a2         159 -GLRFGVYYSGGLDWRFTTEPIRYPEDLSYIRPNTYEY-ADYAYKQVMELVDLYLPDVLWNDMGWPEK-GKEDLKYLFAY  235 (350)
T ss_dssp             -TCEECEEECCSCCTTSCCSCCCSGGGGGTCSCCSHHH-HHHHHHHHHHHHHHHCCSCEEECSCCCGG-GTTHHHHHHHH
T ss_pred             -CCceeEEeccccccccccCCCCCcchhcccCccchHH-HHHHHHHHHHHHhccCCceEEeccccccc-chhhHHHHHHH
Confidence             9999999995 799887653211    11 1123445 68999999999999999999999998754 35667889999


Q ss_pred             HHhcCCCCCcEEEecccCCCCCCCCCCccCCCC
Q psy110          320 LYNESPVKNTVVVNDRWCNTCLCKHGGYLTCED  352 (358)
Q Consensus       320 ~yn~~~~~~~VvvNdR~g~~~~~~hgd~~t~~d  352 (358)
                      +++.   +|+++||+|++.+    ++|+.++++
T Consensus       236 i~~~---qp~~~i~~r~~~~----~~~~~~~~~  261 (350)
T d1hl9a2         236 YYNK---HPEGSVNDRWGVP----HWDFKTAEY  261 (350)
T ss_dssp             HHHH---CTTCCBCSCSSSS----CCSSEEEC-
T ss_pred             HHHh---CCCCcccceeccC----CCCCccccc
Confidence            9984   6689999999874    345544443
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure