Psyllid ID: psy11112

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630--
METRIVSKPRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDEAKYNGATNNNNNENIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQKSKTRERIPTAVSKQYNCLER
cccccccccccHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccHHHcccccccEEEEccccccccccHHHHHcccccHHHHHHHHHHccccccccccccccccccHHHHHHcHHHHHHHHHHHcccccccEEEcccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEcccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccHHHHcccccccccHHHHHHHHHHHcc
cccEEEccccHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccccHccccccccHHcccccccEEEEEcHcccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHcccHcHccEEccccccHHHHHHccccccHHHccccccccccEEEEcccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHccccEEEEccccccccccccccHHHccccccEEEEEccccccccccEEEEEEccEEEEccHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHEEEcHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccHHHHHHHHHHHccccEEEEEcEEccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHccHHHHHcccccccccHHHHHHHHHHcc
metrivskprcqiMSIWTLWLTVLLispvnnvilfpvykdvntpqpfiedlsqygdqdkvsqqaslpdhvyldamgfgmgccclQVTFQACNISEAKTLydqltplcpimngtyfIFHSELSVFYNSLRTERILYFIQNAspifrgyltdvdcrwnvisgsvdcrtreergleplrknrfvipksrydsidsylspehgekyndvpliydrDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNekvnqndeidtdhfeniqstnwqtmrfkppppnssigwrvefrpcetqltdfeNAAFVCFVVLLTRIILSYnlnfvipiskvdENMKRAQKRDALNREKFWFRRDCAikktggedssipgdsqqsrppmdgtpetnplymngnsvysgsdeakyngatnnnnnenikqdggeEYVEMTINEIIngkegvfpglaPLISRYLismdvdtdtHCTIQQYLKLIQNRASGEILTTASWIRSFVtshpaykqdsvvseEITYDLLLKSHhiqtgrtpyndvpliydrDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNekvnqndeidtdhfevpnsvvseEITYDLLLKShhiqtgrtpcpqllgkcliqksktreriptavskqyncler
metrivskprcqiMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVIsgsvdcrtreergleplrknrfvipksrydsidsylspehgekynDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFvipiskvdenmkraqkrdalnrekfwfrrDCAIkktggedssipgdsqqsrppmDGTPETNPLYMNGNSVYSGSDEAKYNGatnnnnnenikqdgGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTShpaykqdsvVSEEITYDLLLKshhiqtgrtpyndvPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQndeidtdhfevpnsVVSEEITYDLLLKSHHIqtgrtpcpqllGKCLiqksktreriptavskqyncler
METRIVSKPRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDEAKYNGATnnnnnenIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQKSKTRERIPTAVSKQYNCLER
********PRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQY**********SLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQT**********SIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVD**********ALNREKFWFRRDCAI*****************************************************************YVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQK********************
********PRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQY**********SLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGL*PL****FVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTG************************PLYMNGNSVYSGSDEAKYNGATNNNNN*NIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQKS***ERIPTAVSKQYNCL**
********PRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKT*******************GTPETNPLYMNGNSVYSGSDEAKYNGATNNNNNENIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQKSKTRERIPTAVSKQYNCLER
**TRIVSKPRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAI**************************TNPLYMNGNSVYSGSD*****************QDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQKSKTRERIPTAVSKQYNCLER
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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METRIVSKPRCQIMSIWTLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDEAKYNGATNNNNNENIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFEVPNSVVSEEITYDLLLKSHHIQTGRTPCPQLLGKCLIQKSKTRERIPTAVSKQYNCLER
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query632 2.2.26 [Sep-21-2011]
Q9W3K5717 Glutamate--cysteine ligas yes N/A 0.707 0.623 0.544 1e-152
P48506637 Glutamate--cysteine ligas no N/A 0.643 0.638 0.540 1e-146
P97494637 Glutamate--cysteine ligas yes N/A 0.643 0.638 0.538 1e-145
P19468637 Glutamate--cysteine ligas yes N/A 0.643 0.638 0.538 1e-145
Q9NFN6652 Glutamate--cysteine ligas N/A N/A 0.647 0.627 0.479 1e-128
Q20117654 Glutamate--cysteine ligas yes N/A 0.648 0.626 0.494 1e-127
Q8X0X0728 Glutamate--cysteine ligas N/A N/A 0.669 0.581 0.451 1e-112
Q54PC2626 Glutamate--cysteine ligas yes N/A 0.634 0.640 0.438 1e-111
Q09768669 Glutamate--cysteine ligas yes N/A 0.617 0.582 0.422 1e-107
Q9HF78690 Glutamate--cysteine ligas N/A N/A 0.409 0.375 0.434 6e-69
>sp|Q9W3K5|GSH1_DROME Glutamate--cysteine ligase OS=Drosophila melanogaster GN=Gclc PE=2 SV=1 Back     alignment and function desciption
 Score =  537 bits (1384), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/516 (54%), Positives = 344/516 (66%), Gaps = 69/516 (13%)

Query: 67  PDHVYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYN 126
           PD V LDAMGFGMGCCCLQ+TFQACNI+EA+ LYDQL PLCPIM                
Sbjct: 227 PDVVLLDAMGFGMGCCCLQLTFQACNITEARRLYDQLAPLCPIM---------------- 270

Query: 127 SLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSR 186
                     +  ASPI+RGYLT+ DCRWNVIS SVDCRT EERGL PL + +F I KSR
Sbjct: 271 --------LALTAASPIYRGYLTESDCRWNVISSSVDCRTEEERGLAPLDQQKFRIAKSR 322

Query: 187 YDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKV 246
           YDSIDSYLSPE G KYNDVPL YD  +Y +L++ GID +L+QH+AHLFIRDTVSLF+EKV
Sbjct: 323 YDSIDSYLSPE-GAKYNDVPLTYDEKVYQRLVEGGIDHLLAQHVAHLFIRDTVSLFSEKV 381

Query: 247 NQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVL 306
           +QND  DTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCE Q++DFENAA VCFVVL
Sbjct: 382 HQNDNEDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCEAQISDFENAAIVCFVVL 441

Query: 307 LTRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKK------------- 353
           LTR+ILSY LNF+ PISKVDENM+ AQKRDA  +EKFWFR+     +             
Sbjct: 442 LTRVILSYQLNFLTPISKVDENMQTAQKRDACRKEKFWFRKSSKTTEQRAAKAQAQAQAQ 501

Query: 354 ------TGGEDS-------------SIPGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDE 394
                 T G+ +             S   D ++ +P  +G+ +     MNG+   + +  
Sbjct: 502 AKAQAQTNGKATLNGNGLANGNGNGSENSDQEEQQPLTNGSAK-----MNGHGSGTTNGT 556

Query: 395 AKYNGATNNNNNENIKQDGGEE---YVEMTINEIINGKEGVFPGLAPLISRYLISMDVDT 451
              +  ++N  + +      EE   +  ++INEI NGK  VFPGL PLI  YL SM+VDT
Sbjct: 557 NGSSNGSSNGTDSDHTDTDDEENELFQLLSINEIFNGKPNVFPGLVPLIRSYLQSMEVDT 616

Query: 452 DTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQ 511
           DTHCTI+QYL+ IQ RA+GE++TTA+W+R  V SHP YKQDSVVSE I YDLL +   IQ
Sbjct: 617 DTHCTIEQYLRFIQKRAAGELITTATWMREQVLSHPDYKQDSVVSERINYDLLKRIQGIQ 676

Query: 512 TGRTPYNDVPLIYDRDIYNQL-IQNGIDPMLSQHIA 546
            G+      P +  +D +++   ++ I P L + +A
Sbjct: 677 EGKQVE---PALLGQDYHSKTKTKDFIPPALQKQLA 709

Drosophila melanogaster (taxid: 7227)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: 2
>sp|P48506|GSH1_HUMAN Glutamate--cysteine ligase catalytic subunit OS=Homo sapiens GN=GCLC PE=1 SV=2 Back     alignment and function description
>sp|P97494|GSH1_MOUSE Glutamate--cysteine ligase catalytic subunit OS=Mus musculus GN=Gclc PE=2 SV=4 Back     alignment and function description
>sp|P19468|GSH1_RAT Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus GN=Gclc PE=1 SV=2 Back     alignment and function description
>sp|Q9NFN6|GSH1_ONCVO Glutamate--cysteine ligase OS=Onchocerca volvulus GN=gcs-1 PE=2 SV=2 Back     alignment and function description
>sp|Q20117|GSH1_CAEEL Glutamate--cysteine ligase OS=Caenorhabditis elegans GN=gcs-1 PE=1 SV=2 Back     alignment and function description
>sp|Q8X0X0|GSH1_NEUCR Glutamate--cysteine ligase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gcs-1 PE=3 SV=1 Back     alignment and function description
>sp|Q54PC2|GSH1_DICDI Glutamate--cysteine ligase OS=Dictyostelium discoideum GN=gcsA PE=2 SV=1 Back     alignment and function description
>sp|Q09768|GSH1_SCHPO Glutamate--cysteine ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gcs1 PE=3 SV=1 Back     alignment and function description
>sp|Q9HF78|GSH1_CANAX Glutamate--cysteine ligase OS=Candida albicans GN=GCS1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query632
156543683636 PREDICTED: glutamate--cysteine ligase ca 0.639 0.635 0.602 1e-163
193620301644 PREDICTED: glutamate--cysteine ligase ca 0.648 0.636 0.608 1e-161
307199403638 Glutamate--cysteine ligase catalytic sub 0.631 0.625 0.601 1e-161
383862852598 PREDICTED: glutamate--cysteine ligase ca 0.629 0.665 0.594 1e-161
91093659639 PREDICTED: similar to glutamate cysteine 0.647 0.640 0.603 1e-160
383862850634 PREDICTED: glutamate--cysteine ligase ca 0.629 0.627 0.594 1e-160
340719896640 PREDICTED: glutamate--cysteine ligase ca 0.629 0.621 0.588 1e-160
350408303634 PREDICTED: glutamate--cysteine ligase ca 0.629 0.627 0.588 1e-159
321474026641 hypothetical protein DAPPUDRAFT_300820 [ 0.643 0.634 0.595 1e-159
242008426644 glutamate--cysteine ligase, putative [Pe 0.648 0.636 0.594 1e-158
>gi|156543683|ref|XP_001605407.1| PREDICTED: glutamate--cysteine ligase catalytic subunit-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 292/485 (60%), Positives = 338/485 (69%), Gaps = 81/485 (16%)

Query: 32  VILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQAC 91
            I  P+YKD N   PF E+L++ GD D  S++A+  +HVY+DAMGFGMGCCCLQ+TFQAC
Sbjct: 202 AINLPIYKDKNVKLPFKENLAELGD-DGSSEKAAKENHVYMDAMGFGMGCCCLQLTFQAC 260

Query: 92  NISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDV 151
           NI EA+TLYDQLTPLCPIM                          +  ASP +RGY+TDV
Sbjct: 261 NIEEARTLYDQLTPLCPIMLA------------------------LTAASPFYRGYVTDV 296

Query: 152 DCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDR 211
           DCRWNVIS SVDCRT EERGL+PL++N+F I KSRYDSIDSYLS E G++YNDVPL YD+
Sbjct: 297 DCRWNVISCSVDCRTEEERGLKPLKENKFKISKSRYDSIDSYLS-EQGDRYNDVPLTYDK 355

Query: 212 DIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFK 271
           DIY QL+ NGID +L+QHIAHLFIRDTVSLF+EKV+QND  DTDHFENIQSTNWQTMRFK
Sbjct: 356 DIYKQLLDNGIDKLLAQHIAHLFIRDTVSLFSEKVHQNDLEDTDHFENIQSTNWQTMRFK 415

Query: 272 PPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKR 331
           PPP NSSIGWRVEFRPCE Q+TDFENAA VCFVVLLTR+ILSY LN +IPISKVDENM R
Sbjct: 416 PPPSNSSIGWRVEFRPCEVQITDFENAAIVCFVVLLTRVILSYKLNLLIPISKVDENMAR 475

Query: 332 AQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGNSVYSG 391
           AQKRDA+  EKFWFRRD            I  ++QQ                        
Sbjct: 476 AQKRDAVKTEKFWFRRD------------ITCNTQQG----------------------- 500

Query: 392 SDEAKYNGATNNNNNENIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDT 451
                               D  +EY E TI+EI+NGKEG FPGL PL++ YL SMD D 
Sbjct: 501 --------------------DIKDEYTEYTIDEIVNGKEGTFPGLIPLVNSYLSSMDADA 540

Query: 452 DTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQ 511
           DTHCTIQ+Y+KLIQ RASGE+LTTA W+R  V +HP YKQDS +S+ I YDLL K H I+
Sbjct: 541 DTHCTIQRYIKLIQRRASGELLTTAKWLRQEVLTHPEYKQDSRISQRINYDLLKKIHDIE 600

Query: 512 TGRTP 516
             + P
Sbjct: 601 ANKVP 605

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|193620301|ref|XP_001947007.1| PREDICTED: glutamate--cysteine ligase catalytic subunit-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307199403|gb|EFN80028.1| Glutamate--cysteine ligase catalytic subunit [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383862852|ref|XP_003706897.1| PREDICTED: glutamate--cysteine ligase catalytic subunit isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
>gi|91093659|ref|XP_966349.1| PREDICTED: similar to glutamate cysteine ligase isoform 1 [Tribolium castaneum] gi|270008080|gb|EFA04528.1| hypothetical protein TcasGA2_TC016323 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|383862850|ref|XP_003706896.1| PREDICTED: glutamate--cysteine ligase catalytic subunit isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|340719896|ref|XP_003398380.1| PREDICTED: glutamate--cysteine ligase catalytic subunit-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350408303|ref|XP_003488364.1| PREDICTED: glutamate--cysteine ligase catalytic subunit-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|321474026|gb|EFX84992.1| hypothetical protein DAPPUDRAFT_300820 [Daphnia pulex] Back     alignment and taxonomy information
>gi|242008426|ref|XP_002425007.1| glutamate--cysteine ligase, putative [Pediculus humanus corporis] gi|212508636|gb|EEB12269.1| glutamate--cysteine ligase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query632
FB|FBgn0040319717 Gclc "Glutamate-cysteine ligas 0.411 0.362 0.655 1.3e-147
UNIPROTKB|E2RPJ4637 GCLC "Uncharacterized protein" 0.390 0.387 0.645 8.1e-140
MGI|MGI:104990637 Gclc "glutamate-cysteine ligas 0.392 0.389 0.640 5.6e-139
RGD|619868637 Gclc "glutamate-cysteine ligas 0.362 0.359 0.666 5.6e-139
UNIPROTKB|P48506637 GCLC "Glutamate--cysteine liga 0.390 0.387 0.637 7.2e-139
UNIPROTKB|F1NQZ9586 GCLC "Uncharacterized protein" 0.362 0.390 0.675 3.9e-138
UNIPROTKB|F1RZV7641 GCLC "Uncharacterized protein" 0.362 0.357 0.670 3.9e-138
ZFIN|ZDB-GENE-030131-5056631 gclc "glutamate-cysteine ligas 0.362 0.362 0.662 6.4e-136
UNIPROTKB|Q32S38605 GCLC "Glutamate-cysteine ligas 0.362 0.378 0.670 2.8e-123
DICTYBASE|DDB_G0284651626 gcsA "glutamate-cysteine ligas 0.330 0.333 0.594 1.2e-110
FB|FBgn0040319 Gclc "Glutamate-cysteine ligase catalytic subunit" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 907 (324.3 bits), Expect = 1.3e-147, Sum P(3) = 1.3e-147
 Identities = 175/267 (65%), Positives = 206/267 (77%)

Query:   133 ILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDS 192
             I+  +  ASPI+RGYLT+ DCRWNVIS SVDCRT EERGL PL + +F I KSRYDSIDS
Sbjct:   269 IMLALTAASPIYRGYLTESDCRWNVISSSVDCRTEEERGLAPLDQQKFRIAKSRYDSIDS 328

Query:   193 YLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEI 252
             YLSPE G KYNDVPL YD  +Y +L++ GID +L+QH+AHLFIRDTVSLF+EKV+QND  
Sbjct:   329 YLSPE-GAKYNDVPLTYDEKVYQRLVEGGIDHLLAQHVAHLFIRDTVSLFSEKVHQNDNE 387

Query:   253 DTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIIL 312
             DTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCE Q++DFENAA VCFVVLLTR+IL
Sbjct:   388 DTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCEAQISDFENAAIVCFVVLLTRVIL 447

Query:   313 SYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPM 372
             SY LNF+ PISKVDENM+ AQKRDA  +EKFWFR+    K T  E  +    +Q ++   
Sbjct:   448 SYQLNFLTPISKVDENMQTAQKRDACRKEKFWFRKSS--KTT--EQRAAKAQAQ-AQAQA 502

Query:   373 DGTPETN-PLYMNGNSVYSGSDEAKYN 398
                 +TN    +NGN + +G+     N
Sbjct:   503 KAQAQTNGKATLNGNGLANGNGNGSEN 529
GO:0017109 "glutamate-cysteine ligase complex" evidence=ISS;IPI
GO:0004357 "glutamate-cysteine ligase activity" evidence=ISS;IDA
GO:0006750 "glutathione biosynthetic process" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0048471 "perinuclear region of cytoplasm" evidence=IDA
GO:0006749 "glutathione metabolic process" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0006974 "response to DNA damage stimulus" evidence=IMP
UNIPROTKB|E2RPJ4 GCLC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:104990 Gclc "glutamate-cysteine ligase, catalytic subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|619868 Gclc "glutamate-cysteine ligase, catalytic subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P48506 GCLC "Glutamate--cysteine ligase catalytic subunit" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NQZ9 GCLC "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZV7 GCLC "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5056 gclc "glutamate-cysteine ligase, catalytic subunit" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q32S38 GCLC "Glutamate-cysteine ligase catalytic subunit" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284651 gcsA "glutamate-cysteine ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P97494GSH1_MOUSE6, ., 3, ., 2, ., 20.53860.64390.6389yesN/A
Q9W3K5GSH1_DROME6, ., 3, ., 2, ., 20.54450.70720.6234yesN/A
P19468GSH1_RAT6, ., 3, ., 2, ., 20.53860.64390.6389yesN/A
Q54PC2GSH1_DICDI6, ., 3, ., 2, ., 20.43830.63440.6405yesN/A
Q20117GSH1_CAEEL6, ., 3, ., 2, ., 20.49480.64870.6269yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.2.20.824
3rd Layer6.3.20.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query632
pfam03074365 pfam03074, GCS, Glutamate-cysteine ligase 0.0
pfam03074 365 pfam03074, GCS, Glutamate-cysteine ligase 2e-18
>gnl|CDD|217355 pfam03074, GCS, Glutamate-cysteine ligase Back     alignment and domain information 
 Score =  545 bits (1407), Expect = 0.0
 Identities = 232/443 (52%), Positives = 279/443 (62%), Gaps = 82/443 (18%)

Query: 70  VYLDAMGFGMGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLR 129
           +Y+D MGFGMGCCCLQVTFQA NI EA+ LYDQL P+CPI                    
Sbjct: 1   IYMDCMGFGMGCCCLQVTFQAPNIDEARYLYDQLAPICPIFLA----------------- 43

Query: 130 TERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRKNRFVIPKSRYDS 189
                  +  A+P FRGYL D D RW VIS SVD RTREERGL PL+ N+F I KSRYDS
Sbjct: 44  -------LSAATPFFRGYLADQDVRWLVISASVDDRTREERGLVPLKNNKFHISKSRYDS 96

Query: 190 IDSYLSP--EHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVN 247
           ID Y+S    + E+YND+ L  +  IY QL+  GID  L++HIAHLFIRD + +F E ++
Sbjct: 97  IDVYISKCKPNLEEYNDIDLPINEKIYEQLLDEGIDHRLAKHIAHLFIRDPLVIFEEMID 156

Query: 248 QNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLL 307
           Q+D   ++HFENIQSTNWQTMRFKPPPP+S IGWRVEFRP E QLTDFENAA+  FVVLL
Sbjct: 157 QDDATSSEHFENIQSTNWQTMRFKPPPPDSDIGWRVEFRPMEVQLTDFENAAYSVFVVLL 216

Query: 308 TRIILSYNLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQ 367
           TR ILS+NLNF IPISKVDENMKRA  RDA+ ++KF+FR+D    K              
Sbjct: 217 TRAILSFNLNFYIPISKVDENMKRAHNRDAVLQQKFYFRKDIFKGKC------------- 263

Query: 368 SRPPMDGTPETNPLYMNGNSVYSGSDEAKYNGATNNNNNENIKQDGGEEYVEMTINEIIN 427
                  T  +              +EA+                        +I+EIIN
Sbjct: 264 -------TTSS-------------DEEAEM-----------------------SIDEIIN 280

Query: 428 GKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHP 487
           GKEG FPGL PL+  YL S +VD DT C+I+ YLK I  RASGE+ T A W+R+FVT+HP
Sbjct: 281 GKEGGFPGLIPLVRSYLESENVDVDTRCSIENYLKFISKRASGELPTAARWMRNFVTTHP 340

Query: 488 AYKQDSVVSEEITYDLLLKSHHI 510
            YK DSV+++EI YDLLLK   I
Sbjct: 341 DYKHDSVITDEINYDLLLKCDQI 363

This family represents the catalytic subunit of glutamate-cysteine ligase (E.C. 6.3.2.2), also known as gamma-glutamylcysteine synthetase (GCS). This enzyme catalyzes the rate limiting step in the biosynthesis of glutathione. The eukaryotic enzyme is a dimer of a heavy chain and a light chain with all the catalytic activity exhibited by the heavy chain (this family). Length = 365
>gnl|CDD|217355 pfam03074, GCS, Glutamate-cysteine ligase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 632
KOG3754|consensus640 100.0
PF03074371 GCS: Glutamate-cysteine ligase; InterPro: IPR00430 100.0
KOG3754|consensus 640 99.86
PF03074 371 GCS: Glutamate-cysteine ligase; InterPro: IPR00430 99.82
PRK13517373 carboxylate-amine ligase; Provisional 98.68
PRK13515371 carboxylate-amine ligase; Provisional 98.25
TIGR02050287 gshA_cyan_rel uncharacterized enzyme. This family 98.01
PRK13516373 gamma-glutamyl:cysteine ligase; Provisional 97.83
TIGR02048376 gshA_cyano glutamate--cysteine ligase, cyanobacter 97.14
PRK13518357 carboxylate-amine ligase; Provisional 97.04
PF04107288 GCS2: Glutamate-cysteine ligase family 2(GCS2); In 93.93
PLN02611482 glutamate--cysteine ligase 92.62
TIGR01436446 glu_cys_lig_pln glutamate--cysteine ligase, plant 91.33
COG2170369 Uncharacterized conserved protein [Function unknow 91.04
>KOG3754|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.9e-199  Score=1548.34  Aligned_cols=416  Identities=64%  Similarity=1.049  Sum_probs=391.1

Q ss_pred             HHHHHHhhcCCCceeEecCccccCCCCCCCcccCccCCCCchhhccCCCCCeeeeccccccccccccccccccCChhhHh
Q psy11112         18 TLWLTVLLISPVNNVILFPVYKDVNTPQPFIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISEAK   97 (632)
Q Consensus        18 ~~~~~~~~~~~~KV~InvPifkD~nTp~Pf~e~~~~~~~~d~e~~~aa~pdhIYMDAMGFGMGccCLQvTfQA~nI~EAR   97 (632)
                      ||---+--|||+||+||||||||+|||+||++++..+.  +.|.+.|++|||||||||||||||||||||||||||+|||
T Consensus       189 tLT~nIr~RRGeKV~invpifkD~nTp~pf~e~~~~~~--~ped~~a~~pdhIymDsMGFGMGccCLQvTFQA~ni~eAR  266 (640)
T KOG3754|consen  189 TLTANIRTRRGEKVAINVPIFKDTNTPSPFDEIYRDWF--LPEDARAKKPDHIYMDSMGFGMGCCCLQVTFQACNIDEAR  266 (640)
T ss_pred             hhhhhhhhccCceeEEecceeccCCCCCCccchhhhcc--CccccccCCCCeEEEcccccCccceeeEeeeeccCchHHH
Confidence            34445567899999999999999999999999874432  3466778899999999999999999999999999999999


Q ss_pred             hhhhhcCCccchhcccccccccchhhhhcccchhhhhccccccccccceeecccccccccccccccCCcccccccccCCC
Q psy11112         98 TLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPLRK  177 (632)
Q Consensus        98 ~LYDQL~pl~PImLA~~~~~~~~~~~~~~~~~~~~~~~~LSAAsPi~rG~LaD~D~RWnVIS~SVDdRT~eErg~~pL~~  177 (632)
                      ||||||+|+||||||                        ||||||+|||||+|+||||||||+||||||+||||++||++
T Consensus       267 ~LYDqL~pi~PimlA------------------------lSAatP~frGylad~DcRWnVIs~sVDdRT~eErgl~PL~~  322 (640)
T KOG3754|consen  267 YLYDQLTPITPIMLA------------------------LSAATPAFRGYLADQDCRWNVISGSVDDRTPEERGLAPLKN  322 (640)
T ss_pred             HHHHhhccchHHHHH------------------------HhccChhhcccccccccccceeeccccCCChhhcCCccccc
Confidence            999999999999999                        99999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCccccccCCCCCCCCCCCCCCCCHHHHHHHHHcCCChhhhhhhhhhhhccccchhccccccCCCCCcccc
Q psy11112        178 NRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDTVSLFNEKVNQNDEIDTDHF  257 (632)
Q Consensus       178 ~~~~IpKSRYdSid~Yis~~~~~~YNDi~~~~de~iy~~L~~~GiD~~LA~H~AHLFIRDPlviF~E~i~qdd~~~tDHF  257 (632)
                      ++++||||||||||+|||++ +.+|||+|++|||++|++|+++|||++||+||||||||||+++|+|+|+|||.+++|||
T Consensus       323 ~~~~I~KSRYdSvD~yls~~-~~~YNDvpl~ide~vy~~Ll~~~iD~~LAkH~AHlfiRDp~~~F~e~i~qdd~~ss~HF  401 (640)
T KOG3754|consen  323 KKLRIPKSRYDSVDLYLSPC-KRKYNDVPLTIDEKVYGRLLEGGIDELLAKHVAHLFIRDPVSLFEEKIHQDDKTSSDHF  401 (640)
T ss_pred             cceecccccccchheeecCC-CCccCCCCccccHHHHHHHHhcCccHHHHHHHHHHhhcChHHHHHHHHhcccccchhhh
Confidence            99999999999999999999 89999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCcceecCCCCCCCCCceeeeeccCccCCchhhhHHHHHHHHHHHHHHhcCCceeeccchhhhhHHHHhhhcc
Q psy11112        258 ENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLNFVIPISKVDENMKRAQKRDA  337 (632)
Q Consensus       258 ENIQSTNWQtmRFKPPP~~s~iGWRVEFRpmEvQlTDFENAAf~vFivLLtRaILs~~LnfyIPISkVDENM~rAqkrdA  337 (632)
                      ||||||||||||||||||+|+||||||||||||||||||||||+||||||||+||+|+||||||||||||||++||||||
T Consensus       402 EniqSTNWqtmRFKPPpp~s~iGWRVEFRp~EvQltDFENaAy~~fVvlltr~ilsf~ln~l~piSkVdENMk~Aq~rDA  481 (640)
T KOG3754|consen  402 ENIQSTNWQTMRFKPPPPNSSIGWRVEFRPMEVQLTDFENAAYSVFVVLLTRVILSFNLNFLIPISKVDENMKIAQKRDA  481 (640)
T ss_pred             hhhcccccceeccCCcCCCCCCceeEEeeeeeEEeccccccceEEeehhhhHHHHhhhhheEeehhhhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCceeeeecccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCcccccCCCCCCCCCCCCCCCCcce
Q psy11112        338 LNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDEAKYNGATNNNNNENIKQDGGEEY  417 (632)
Q Consensus       338 v~~eKFwFRk~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  417 (632)
                      |+++||||||+.+  +.               +..+++            |   +               .-+++...+|
T Consensus       482 il~~kF~frk~~c--kn---------------~~~n~~------------g---~---------------q~~~~~s~~~  514 (640)
T KOG3754|consen  482 ILFEKFWFRKSEC--KN---------------AFRNGT------------G---S---------------QDCGDESEEF  514 (640)
T ss_pred             HHhhhheeecccc--cc---------------cCCCCC------------c---c---------------cccCcchhhh
Confidence            9999999999976  11               111111            0   0               0023455789


Q ss_pred             eeeehhhhhcCCCCCcccchHHHHHhhhccCCChhHHHHHHHHHHHHhhhhcCccchhHHHHHhhhccCCCCCCCCccch
Q psy11112        418 VEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSE  497 (632)
Q Consensus       418 ~emTi~EIinGk~~~FPGLiplv~~YL~s~~vd~~t~~~i~~YL~lI~~RAsGel~T~A~wiR~FV~~HPdYKqDSVVS~  497 (632)
                      ++|||+||||||+++||||||+|++||.++++|++|+|+|.+||+||+|||+|||+|+|+|||+||++||+||||||||+
T Consensus       515 ~~~SIdeifngk~n~FPgli~~irsyl~s~~vD~dt~c~i~~YlklIskRAsGel~T~A~w~R~fv~~HPdYKqDSvvsd  594 (640)
T KOG3754|consen  515 ELLSIDEIFNGKENGFPGLITLIRSYLGSMEVDVDTHCTIEQYLKLISKRASGELPTTAKWMRNFVLSHPDYKQDSVVSD  594 (640)
T ss_pred             hhccHHHHhcCCCCCCCcchHHHHHHHhhcCcCcccceeHHHHHHHHHHhhcCccchHHHHHHHHHhcCCccccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHhh
Q psy11112        498 EITYDLLLKS  507 (632)
Q Consensus       498 ~InYDLl~~~  507 (632)
                      +||||||++|
T Consensus       595 ~inYdLl~~~  604 (640)
T KOG3754|consen  595 EINYDLLKRC  604 (640)
T ss_pred             hhhHHHHHHH
Confidence            9999999999

>PF03074 GCS: Glutamate-cysteine ligase; InterPro: IPR004308 This family represents the catalytic subunit of glutamate-cysteine ligase (6 Back     alignment and domain information
>KOG3754|consensus Back     alignment and domain information
>PF03074 GCS: Glutamate-cysteine ligase; InterPro: IPR004308 This family represents the catalytic subunit of glutamate-cysteine ligase (6 Back     alignment and domain information
>PRK13517 carboxylate-amine ligase; Provisional Back     alignment and domain information
>PRK13515 carboxylate-amine ligase; Provisional Back     alignment and domain information
>TIGR02050 gshA_cyan_rel uncharacterized enzyme Back     alignment and domain information
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional Back     alignment and domain information
>TIGR02048 gshA_cyano glutamate--cysteine ligase, cyanobacterial, putative Back     alignment and domain information
>PRK13518 carboxylate-amine ligase; Provisional Back     alignment and domain information
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6 Back     alignment and domain information
>PLN02611 glutamate--cysteine ligase Back     alignment and domain information
>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type Back     alignment and domain information
>COG2170 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query632
3ig5_A692 Saccharomyces Cerevisiae Glutamate Cysteine Ligase 5e-70
3ig5_A692 Saccharomyces Cerevisiae Glutamate Cysteine Ligase 3e-11
3ig5_A 692 Saccharomyces Cerevisiae Glutamate Cysteine Ligase 5e-06
3ig8_A692 Saccharomyces Cerevisiae Glutamate Cysteine Ligase 6e-70
3ig8_A692 Saccharomyces Cerevisiae Glutamate Cysteine Ligase 3e-11
3ig8_A 692 Saccharomyces Cerevisiae Glutamate Cysteine Ligase 5e-06
>pdb|3IG5|A Chain A, Saccharomyces Cerevisiae Glutamate Cysteine Ligase In Complex With Mg2+ And L-Glutamate Length = 692 Back     alignment and structure 
Iteration: 1

 Score =  262 bits (669), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/361 (44%), Positives = 210/361 (58%), Gaps = 62/361 (17%)
Query: 36  PVYKDVNTPQP--FIEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNI 93
           P+YKD+ TP+    I D   +  +DK ++ AS P  +Y+D+MGFGMGC CLQVTFQA NI
Sbjct: 217 PMYKDIATPETDDSIYDRDWFLPEDKEAKLASKPGFIYMDSMGFGMGCSCLQVTFQAPNI 276
Query: 94  SEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDC 153
           ++A+ LYD L    PIM                       L F   A+P F+G+L D D 
Sbjct: 277 NKARYLYDALVNFAPIM-----------------------LAF-SAAAPAFKGWLADQDV 312
Query: 154 RWNVISGSVDCRTREERGLEPL----RKNRF------------VIPKSRYDSIDSYL--S 195
           RWNVISG+VD RT +ERG+ PL     KN F             IPKSRY S+D +L  S
Sbjct: 313 RWNVISGAVDDRTPKERGVAPLLPKYNKNGFGGIAKDVQDKVLEIPKSRYSSVDLFLGGS 372
Query: 196 PEHGEKYNDVPLIYDRDIYNQLIQNGIDPM---LSQHIAHLFIRDTVSLFNEKVNQNDEI 252
                 YND  +  +  +  +L++N   P+   L++H AHL+IRD VS F E +NQ+++ 
Sbjct: 373 KFFNRTYNDTNVPINEKVLGRLLENDKAPLDYDLAKHFAHLYIRDPVSTFEELLNQDNKT 432
Query: 253 DTDHFENIQSTNWQTMRFKPPPPNS------SIGWRVEFRPCETQLTDFENAAFVCFVVL 306
            ++HFENIQSTNWQT+RFKPP   +      S GWRVEFRP E QL DFENAA+   + L
Sbjct: 433 SSNHFENIQSTNWQTLRFKPPTQQATPDKKDSPGWRVEFRPFEVQLLDFENAAYSVLIYL 492
Query: 307 LTRIILSY--NLNFVIPISKVDENMKRAQKRDALNREKF-W---FRRDCAIKKTGGEDSS 360
           +   IL++  N+N  I +SKV ENMK A  RDA+  EKF W   FR D  ++    ED S
Sbjct: 493 IVDSILTFSDNINAYIHMSKVWENMKIAHHRDAILFEKFHWKKSFRNDTDVET---EDYS 549
Query: 361 I 361
           I
Sbjct: 550 I 550
>pdb|3IG5|A Chain A, Saccharomyces Cerevisiae Glutamate Cysteine Ligase In Complex With Mg2+ And L-Glutamate Length = 692 Back     alignment and structure
>pdb|3IG5|A Chain A, Saccharomyces Cerevisiae Glutamate Cysteine Ligase In Complex With Mg2+ And L-Glutamate Length = 692 Back     alignment and structure
>pdb|3IG8|A Chain A, Saccharomyces Cerevisiae Glutamate Cysteine Ligase In Complex With Mg2+, L-Glutamate And Adp Length = 692 Back     alignment and structure
>pdb|3IG8|A Chain A, Saccharomyces Cerevisiae Glutamate Cysteine Ligase In Complex With Mg2+, L-Glutamate And Adp Length = 692 Back     alignment and structure
>pdb|3IG8|A Chain A, Saccharomyces Cerevisiae Glutamate Cysteine Ligase In Complex With Mg2+, L-Glutamate And Adp Length = 692 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query632
3ig5_A692 Glutamate-cysteine ligase; glutathione, ATP-grAsp, 1e-179
3ig5_A 692 Glutamate-cysteine ligase; glutathione, ATP-grAsp, 6e-18
3ig5_A692 Glutamate-cysteine ligase; glutathione, ATP-grAsp, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A* Length = 692 Back     alignment and structure
 Score =  525 bits (1352), Expect = e-179
 Identities = 184/540 (34%), Positives = 256/540 (47%), Gaps = 120/540 (22%)

Query: 33  ILFPVYKDVNTPQPFIE--DLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQA 90
           +  P+YKD+ TP+      D   +  +DK ++ AS P  +Y+D+MGFGMGC CLQVTFQA
Sbjct: 214 MNVPMYKDIATPETDDSIYDRDWFLPEDKEAKLASKPGFIYMDSMGFGMGCSCLQVTFQA 273

Query: 91  CNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTD 150
            NI++A+ LYD L    PIM           S                 A+P F+G+L D
Sbjct: 274 PNINKARYLYDALVNFAPIMLA--------FSA----------------AAPAFKGWLAD 309

Query: 151 VDCRWNVISGSVDCRTREERGLEPLR----------------KNRFVIPKSRYDSIDSYL 194
            D RWNVISG+VD RT +ERG+ PL                      IPKSRY S+D +L
Sbjct: 310 QDVRWNVISGAVDDRTPKERGVAPLLPKYNKNGFGGIAKDVQDKVLEIPKSRYSSVDLFL 369

Query: 195 SPE--HGEKYNDVPLIYDRDIYNQLIQNG---IDPMLSQHIAHLFIRDTVSLFNEKVNQN 249
                    YND  +  +  +  +L++N    +D  L++H AHL+IRD VS F E +NQ+
Sbjct: 370 GGSKFFNRTYNDTNVPINEKVLGRLLENDKAPLDYDLAKHFAHLYIRDPVSTFEELLNQD 429

Query: 250 DEIDTDHFENIQSTNWQTMRFKPPPPNS------SIGWRVEFRPCETQLTDFENAAFVCF 303
           ++  ++HFENIQSTNWQT+RFKPP   +      S GWRVEFRP E QL DFENAA+   
Sbjct: 430 NKTSSNHFENIQSTNWQTLRFKPPTQQATPDKKDSPGWRVEFRPFEVQLLDFENAAYSVL 489

Query: 304 VVLLTRIILSY--NLNFVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSI 361
           + L+   IL++  N+N  I +SKV ENMK A  RDA+  EKF +++              
Sbjct: 490 IYLIVDSILTFSDNINAYIHMSKVWENMKIAHHRDAILFEKFHWKKSFR----------- 538

Query: 362 PGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDEAKYNGATNNNNNENIKQDGGEEYVEMT 421
                      D   ET    +  + ++   +   +                        
Sbjct: 539 ----------NDTDVETEDYSI--SEIFHNPENGIF------------------------ 562

Query: 422 INEIINGKEGVFPGLAPLISRYLISMDVD------TDTHCTIQQYLKLIQNRASGEILTT 475
                       P     I      +  D      +  H  +  YLKLI +RASGE+ TT
Sbjct: 563 ------------PQFVTPILCQKGFVTKDWKELKHSSKHERLYYYLKLISDRASGELPTT 610

Query: 476 ASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQN 535
           A + R+FV  HP YK DS +S+ I YDLL     +        ++      +I   + +N
Sbjct: 611 AKFFRNFVLQHPDYKHDSKISKSINYDLLSTCDRLTHLDDSKGELTSFLGAEIAEYVKKN 670
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A* Length = 692 Back     alignment and structure
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query632
3ig5_A692 Glutamate-cysteine ligase; glutathione, ATP-grAsp, 100.0
3ig5_A 692 Glutamate-cysteine ligase; glutathione, ATP-grAsp, 99.84
2gwd_A449 Glutamate cysteine ligase; disulfide bridges, glut 99.61
1r8g_A372 Hypothetical protein YBDK; structural genomics, un 98.41
1va6_A518 Glutamate--cysteine ligase; glutathione homeostasi 88.61
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A* Back     alignment and structure
Probab=100.00  E-value=3.1e-183  Score=1485.74  Aligned_cols=436  Identities=43%  Similarity=0.681  Sum_probs=410.8

Q ss_pred             HHHHHHhhcCCCceeEecCccccCCCCCCC--cccCccCCCCchhhccCCCCCeeeeccccccccccccccccccCChhh
Q psy11112         18 TLWLTVLLISPVNNVILFPVYKDVNTPQPF--IEDLSQYGDQDKVSQQASLPDHVYLDAMGFGMGCCCLQVTFQACNISE   95 (632)
Q Consensus        18 ~~~~~~~~~~~~KV~InvPifkD~nTp~Pf--~e~~~~~~~~d~e~~~aa~pdhIYMDAMGFGMGccCLQvTfQA~nI~E   95 (632)
                      ||---+..|||+||+||||||+|+|||+|.  +.+...++++|+++.+|++||||||||||||||||||||||||+|++|
T Consensus       199 tLT~NIR~RRG~KV~InIPif~D~nTp~~d~ti~~~~~f~~~~~~~~~aa~p~~IyMDaMgFGMGccCLQvTfQa~ni~e  278 (692)
T 3ig5_A          199 NLTASIRTRRGEKVCMNVPMYKDIATPETDDSIYDRDWFLPEDKEAKLASKPGFIYMDSMGFGMGCSCLQVTFQAPNINK  278 (692)
T ss_dssp             HHHHHHHHHHSSCCCEEEEBCCCTTCCSSCTTCCCCCSSTTGGGTHHHHCCTTEEEECSTHHHHTSCBEEEEEEESSHHH
T ss_pred             HHHHHHHHhcCCCceEeeccccCCCCCCCCcccchhhhCCccccccccccCCCeeEeccccccccccceeeeeccCCHHH
Confidence            555567889999999999999999999942  223344667788899999999999999999999999999999999999


Q ss_pred             HhhhhhhcCCccchhcccccccccchhhhhcccchhhhhccccccccccceeecccccccccccccccCCcccccccccC
Q psy11112         96 AKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVISGSVDCRTREERGLEPL  175 (632)
Q Consensus        96 AR~LYDQL~pl~PImLA~~~~~~~~~~~~~~~~~~~~~~~~LSAAsPi~rG~LaD~D~RWnVIS~SVDdRT~eErg~~pL  175 (632)
                      ||+|||||+|+||||||                        ||||||+|||+|+|+||||+|||+||||||+||||++||
T Consensus       279 AR~lYDqL~~l~PimLA------------------------LSAASP~~kG~lad~DtRW~vIs~sVDdRt~eErg~~pl  334 (692)
T 3ig5_A          279 ARYLYDALVNFAPIMLA------------------------FSAAAPAFKGWLADQDVRWNVISGAVDDRTPKERGVAPL  334 (692)
T ss_dssp             HHHHHHHHTTHHHHHHH------------------------HTCCCCEETTEEBSBCCSHHHHHHHTCCCCTTTTTSCCS
T ss_pred             HHHHHHhhhhhHHHHHH------------------------HhhcChhhcceecccchhHHHHHhhccCCCHHhcCCccc
Confidence            99999999999999999                        999999999999999999999999999999999999998


Q ss_pred             -------------C---CCCccccCCCCCccccccCCC--CCCCCCCCCCCCCHHHHHHHHHc---CCChhhhhhhhhhh
Q psy11112        176 -------------R---KNRFVIPKSRYDSIDSYLSPE--HGEKYNDVPLIYDRDIYNQLIQN---GIDPMLSQHIAHLF  234 (632)
Q Consensus       176 -------------~---~~~~~IpKSRYdSid~Yis~~--~~~~YNDi~~~~de~iy~~L~~~---GiD~~LA~H~AHLF  234 (632)
                                   |   +++++||||||||||+|||++  +.++|||+++++|+++|++|+++   |||+.||+||||||
T Consensus       335 ~~~~~~~~~~~~~k~~~~~~~~IpKSRY~si~~Yis~~~~~~~~yND~~~~~d~~i~~~L~~~~~~g~D~~LA~H~AHLF  414 (692)
T 3ig5_A          335 LPKYNKNGFGGIAKDVQDKVLEIPKSRYSSVDLFLGGSKFFNRTYNDTNVPINEKVLGRLLENDKAPLDYDLAKHFAHLY  414 (692)
T ss_dssp             STTTSGGGCTTCCGGGGGGCCCCSSCSBSSCCCCCCCSTTCCGGGCCSCCCCCHHHHHHHHSCSSCCCCHHHHHHHHHHT
T ss_pred             ccccccccccccccccccCccccccccCcchhhhccCCccchHhhCCCCcCcCHHHHHHHHhccccCccHHHHHHHHHHh
Confidence                         4   578999999999999999986  68999999999999999999999   99999999999999


Q ss_pred             hccccchhccccccCCCCCcccccccccCCCCcceecCCCC------CCCCCceeeeeccCccCCchhhhHHHHHHHHHH
Q psy11112        235 IRDTVSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPP------NSSIGWRVEFRPCETQLTDFENAAFVCFVVLLT  308 (632)
Q Consensus       235 IRDPlviF~E~i~qdd~~~tDHFENIQSTNWQtmRFKPPP~------~s~iGWRVEFRpmEvQlTDFENAAf~vFivLLt  308 (632)
                      ||||||||+|+|+|||+++|||||||||||||||||||||+      +++||||||||||||||||||||||++||||||
T Consensus       415 IRDPlvif~e~i~~dd~~~tdHFENiQSTNWqt~RFKPPp~~~~~~~~~~iGWRVEFRpmEvQlTDFENAAf~vFivLlt  494 (692)
T 3ig5_A          415 IRDPVSTFEELLNQDNKTSSNHFENIQSTNWQTLRFKPPTQQATPDKKDSPGWRVEFRPFEVQLLDFENAAYSVLIYLIV  494 (692)
T ss_dssp             TSCCCCCBGGGSSCCTTTCCHHHHHHHTTCBCSEEEECCCTTCCTTCTTSCCEEEEECCCBCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCchhhhhhhhhccCcccccchhccccccCCccccCCCCccccCCCCCCCCceeeeecccccCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999      789999999999999999999999999999999


Q ss_pred             HHHHhcCCc--eeeccchhhhhHHHHhhhcccccCceeeeecccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCC
Q psy11112        309 RIILSYNLN--FVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGN  386 (632)
Q Consensus       309 RaILs~~Ln--fyIPISkVDENM~rAqkrdAv~~eKFwFRk~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  386 (632)
                      ||||+|+||  ||||||||||||+||||||||++||||||+++.  .                                 
T Consensus       495 r~IL~~~ln~~fyiPiSkVdeNM~~A~~rdAv~~~kF~fR~~~~--~---------------------------------  539 (692)
T 3ig5_A          495 DSILTFSDNINAYIHMSKVWENMKIAHHRDAILFEKFHWKKSFR--N---------------------------------  539 (692)
T ss_dssp             HHHHHTTTTCCCCCCHHHHHHHHHHTTBTTHHHHCEEEEESCSS--C---------------------------------
T ss_pred             HHHHhcCcCcCeEeecchhHhHHHhhhhhchhhhccceeccCCC--C---------------------------------
Confidence            999999999  999999999999999999999999999997654  0                                 


Q ss_pred             CCCCCCCcccccCCCCCCCCCCCCCCCCcceeeeehhhhhcCCCCC-cccchHHHHHhhhccCCChhHHH------HHHH
Q psy11112        387 SVYSGSDEAKYNGATNNNNNENIKQDGGEEYVEMTINEIINGKEGV-FPGLAPLISRYLISMDVDTDTHC------TIQQ  459 (632)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~emTi~EIinGk~~~-FPGLiplv~~YL~s~~vd~~t~~------~i~~  459 (632)
                                               +.+++|++|||+||||||+++ ||||||+|++||+++++|.+++|      +|.+
T Consensus       540 -------------------------~~~~~~~~mti~EI~nGk~~~~FpGli~lv~~yl~~~~~d~~~~~~~~~~~~l~~  594 (692)
T 3ig5_A          540 -------------------------DTDVETEDYSISEIFHNPENGIFPQFVTPILCQKGFVTKDWKELKHSSKHERLYY  594 (692)
T ss_dssp             -------------------------SSCCCEEEEEHHHHHHCTTTCHHHHTHHHHHHHTTSCSSCGGGGGGCSSCHHHHH
T ss_pred             -------------------------CCccceeeeeHHHHhcCCCCCcCcchHHHHHHHHhhccccchhhcchhhHHHHHH
Confidence                                     012579999999999999888 99999999999999999999999      9999


Q ss_pred             HHHHHhhhhcCccchhHHHHHhhhccCCCCCCCCccchhhhHHHHHhhhhhcCCCCCCCCCCcccchHHHHHHHHcCC
Q psy11112        460 YLKLIQNRASGEILTTASWIRSFVTSHPAYKQDSVVSEEITYDLLLKSHHIQTGRTPYNDVPLIYDRDIYNQLIQNGI  537 (632)
Q Consensus       460 YL~lI~~RAsGel~T~A~wiR~FV~~HPdYKqDSVVS~~InYDLl~~~~~I~~g~~~~ND~~lI~d~~~y~~L~~~gi  537 (632)
                      ||+||++||||||||+|+|||+||++||+||||||||++||||||++|++|++|..+++++.=-+-+.+=+.|.+.|.
T Consensus       595 YL~lI~~RAsG~l~T~A~w~R~FV~~Hp~Yk~DSvVs~~I~yDLi~~~~~I~~~~~~~~~l~~~~g~~~~~~~~~~~~  672 (692)
T 3ig5_A          595 YLKLISDRASGELPTTAKFFRNFVLQHPDYKHDSKISKSINYDLLSTCDRLTHLDDSKGELTSFLGAEIAEYVKKNKP  672 (692)
T ss_dssp             HHHHHHHHHTTSSCCHHHHHHHHHHTCTTCCSSSBCCHHHHHHHHHHHHHHHTTCCTTSHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHhcCCCCcHHHHHHHHHhcCcccccCCcCchhhHHHHHHHHHHHhcCCcCCcHHHHHhhHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999999999999999999999998888755577788888888884
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A* Back     alignment and structure
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A* Back     alignment and structure
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A Back     alignment and structure
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query632
d1r8ga_368 Carboxylate-amine ligase YbdK {Escherichia coli [T 98.62
>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Glutamine synthetase/guanido kinase
superfamily: Glutamine synthetase/guanido kinase
family: Glutamate-cysteine ligase family 2 (GCS2)
domain: Carboxylate-amine ligase YbdK
species: Escherichia coli [TaxId: 562]

Probab=98.62  E-value=1.2e-07  Score=93.76  Aligned_cols=224  Identities=17%  Similarity=0.154  Sum_probs=136.7

Q ss_pred             ccccccccccccCChhhHhhhhhhcCCccchhcccccccccchhhhhcccchhhhhccccccccccceeecccccccccc
Q psy11112         79 MGCCCLQVTFQACNISEAKTLYDQLTPLCPIMNGTYFIFHSELSVFYNSLRTERILYFIQNASPIFRGYLTDVDCRWNVI  158 (632)
Q Consensus        79 MGccCLQvTfQA~nI~EAR~LYDQL~pl~PImLA~~~~~~~~~~~~~~~~~~~~~~~~LSAAsPi~rG~LaD~D~RWnVI  158 (632)
                      |-+|-+||.++-.+-+++-.++..+..+.|+++|                        |+|+||++.|.-+    .|.. 
T Consensus       128 ~~~~g~hv~~~~~d~~~~~~~~~~~~~~~p~l~a------------------------L~anSP~~~G~~t----g~~s-  178 (368)
T d1r8ga_         128 ATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIA------------------------LSAASPYMQGTDT----RFAS-  178 (368)
T ss_dssp             CCBCEEEEEEECSSHHHHHHHHHHHHTTHHHHHH------------------------HHCCBCEETTEEC----SCSB-
T ss_pred             HhhcccceeecCCCHHHHHHHHHHHHHHhHHHHH------------------------HhcCchhhcCcCC----CCcC-
Confidence            4467799999999999999999999999999999                        9999999998632    2211 


Q ss_pred             cccccCCcccccccccCCCCCccccCCCCCccccccCCCCCCCCCCCCCCCCHHHHHHHHHcCCChhhhhhhhhhhhccc
Q psy11112        159 SGSVDCRTREERGLEPLRKNRFVIPKSRYDSIDSYLSPEHGEKYNDVPLIYDRDIYNQLIQNGIDPMLSQHIAHLFIRDT  238 (632)
Q Consensus       159 S~SVDdRT~eErg~~pL~~~~~~IpKSRYdSid~Yis~~~~~~YNDi~~~~de~iy~~L~~~GiD~~LA~H~AHLFIRDP  238 (632)
                           .|...           |    +++.+-.            =.+..-+-.-|..+++.-++.             +
T Consensus       179 -----~R~~~-----------~----~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~-------------~  213 (368)
T d1r8ga_         179 -----SRPNI-----------F----SAFPDNG------------PMPWVSNWQQFEALFRCLSYT-------------T  213 (368)
T ss_dssp             -----CGGGG-----------G----TTSTTCS------------SCCCCSSHHHHHHHHHHHTTS-------------S
T ss_pred             -----CchhH-----------H----hcCCccc------------ccccccchhhHHHHHHHHHhc-------------c
Confidence                 11100           0    0110000            001111233444443211111             1


Q ss_pred             cchhccccccCCCCCcccccccccCCCCcceecCCCCCCCCCceeeeeccCccCCchhhhHHHHHHHHHHHHHHhcCCc-
Q psy11112        239 VSLFNEKVNQNDEIDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCETQLTDFENAAFVCFVVLLTRIILSYNLN-  317 (632)
Q Consensus       239 lviF~E~i~qdd~~~tDHFENIQSTNWQtmRFKPPP~~s~iGWRVEFRpmEvQlTDFENAAf~vFivLLtRaILs~~Ln-  317 (632)
                      + +                 ...++.|..+|.|+--     | +||+|.++.|.|--.=.|.+.|+..+.+.++.-.-. 
T Consensus       214 ~-~-----------------~~~~~~~~~vRp~~~~-----~-~iEiR~~D~~p~~~~~~~~aa~~~~l~~~l~~~~~~~  269 (368)
T d1r8ga_         214 M-I-----------------DSIKDLHWDIRPSPHF-----G-TVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFK  269 (368)
T ss_dssp             S-C-----------------SSGGGCCCSEEEETTT-----T-EEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             c-c-----------------ccCCeeeeecCCcccc-----C-cccccCCCCCCCHHHHHHHhhHHHHHHHHHHhcCCCC
Confidence            0 0                 1134568888976432     2 699999999999766678888888888877764321 


Q ss_pred             -eeeccchhhhhHHHHhhhcccccCceeeeecccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCccc
Q psy11112        318 -FVIPISKVDENMKRAQKRDALNREKFWFRRDCAIKKTGGEDSSIPGDSQQSRPPMDGTPETNPLYMNGNSVYSGSDEAK  396 (632)
Q Consensus       318 -fyIPISkVDENM~rAqkrdAv~~eKFwFRk~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (632)
                       --.+...+.+|+.+|.+...  +..+      .  ..                                          
T Consensus       270 ~~~~~~~~~~~n~~~aar~Gl--~~~l------~--~~------------------------------------------  297 (368)
T d1r8ga_         270 HQEKDYLLYKFNRFQACRYGL--EGVI------T--DP------------------------------------------  297 (368)
T ss_dssp             CCGGGGTTHHHHHHHHHHHGG--GSEE------E--CT------------------------------------------
T ss_pred             cchhhHHHHHHHHHHHHhhcc--cccc------c--cc------------------------------------------
Confidence             23444556677777765431  1111      0  00                                          


Q ss_pred             ccCCCCCCCCCCCCCCCCcceeeeehhhhhcCCCCCcccchHHHHHhhhccCCChhHHHHHHHHHHHHhhhh-cCccchh
Q psy11112        397 YNGATNNNNNENIKQDGGEEYVEMTINEIINGKEGVFPGLAPLISRYLISMDVDTDTHCTIQQYLKLIQNRA-SGEILTT  475 (632)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~e~~emTi~EIinGk~~~FPGLiplv~~YL~s~~vd~~t~~~i~~YL~lI~~RA-sGel~T~  475 (632)
                                        ..-+..++.|++.       -|++.+...|+..|.        ..||+.|.+|. +|  .|.
T Consensus       298 ------------------~~~~~~~~~~~~~-------~Ll~~~~~~l~~lg~--------~~~l~~l~~~v~~g--~t~  342 (368)
T d1r8ga_         298 ------------------HTGDRRPLTEDTL-------RLLEKIAPSAHKIGA--------SSAIEALHRQVVSG--LNE  342 (368)
T ss_dssp             ------------------TTCCEEEHHHHHH-------HHHHHSHHHHHHHTC--------HHHHHHHHHHHHHC--CCH
T ss_pred             ------------------CCCcEeEHHHHHH-------HHHHHHHHHHHHCCC--------HHHHHHHHHHHHhC--CCH
Confidence                              0012345666553       377788888877653        35777777775 45  578


Q ss_pred             HHHHHhhhccCC
Q psy11112        476 ASWIRSFVTSHP  487 (632)
Q Consensus       476 A~wiR~FV~~HP  487 (632)
                      |.|+|+++..|-
T Consensus       343 A~~lr~~~~~~g  354 (368)
T d1r8ga_         343 AQLMRDFVADGG  354 (368)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCC
Confidence            999999999774