Psyllid ID: psy11146

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQELTG
cEEEEEccccccccccHHHHHHHHHccEEEEccccccccHHHHHHHHHHHcccEEEccHHHHHccHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHccccccccccEEEccccccccccccHHHHHHHHHHcccccEEEEEcccccccHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEccccccEEEEEEHHHHHHcccccccEEEEEEccccHHHHHHHHHHHcccccc
cEEEEEcccccccccEHHHHHHHHHccHEEHHHHHHHHHcccHHHHHHHHcccEEEEcHHHHHHcHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcHHHHHHHHHHccEEEccccEEEEEccccccccccHHHHHHHHHHcccEEEEEEEEEcccccHHHHHccccEccccccccHHHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEccHHHHHccccccccEEEEEEccccHHHHHHHHHHccccccc
MFYVVGlglgdvkdITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVilhnadvedVALLVvgdpygatthtDLVLRArqsniptkvvhNASIlnaagccglqlynfgetvsipfwteswkpdsfydKIVENKSRGLHTLCLLDiqvkeptlesltkktrqylpprfmsVSQAAQQLVEItktkpglstaDLAVGIARVGSETQHIVATSLsnmtetdmgkplhsliivgnihpvesefLAQYSTQELTG
mfyvvglglgdvkditvkgleivkkcdrVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDiqvkeptlesltKKTRQYLPPRFMSVSQAAQQLVEItktkpglstADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQELTG
MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQELTG
*FYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLT***RQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLA*********
MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQ****
MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQELTG
MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETDMGKPLHSLIIVGNIHPVESEFLAQYSTQELTG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
Q9H2P9285 Diphthine synthase OS=Hom yes N/A 0.985 0.936 0.581 1e-93
Q9CWQ0281 Diphthine synthase OS=Mus yes N/A 0.985 0.950 0.574 7e-93
Q5E982285 Diphthine synthase OS=Bos yes N/A 0.977 0.929 0.566 8e-92
O81769277 Probable diphthine syntha yes N/A 0.970 0.949 0.569 2e-84
Q5BFG0285 Diphthine synthase OS=Eme yes N/A 0.992 0.943 0.560 3e-84
Q6BN80300 Diphthine synthase OS=Deb yes N/A 0.974 0.88 0.543 2e-83
Q6C1E0300 Diphthine synthase OS=Yar yes N/A 0.977 0.883 0.552 2e-83
Q59NX9299 Diphthine synthase OS=Can N/A N/A 0.974 0.882 0.550 1e-82
Q6FXK9298 Diphthine synthase OS=Can yes N/A 0.929 0.845 0.570 2e-82
O74898283 Diphthine synthase OS=Sch yes N/A 0.974 0.932 0.559 3e-82
>sp|Q9H2P9|DPH5_HUMAN Diphthine synthase OS=Homo sapiens GN=DPH5 PE=1 SV=2 Back     alignment and function desciption
 Score =  342 bits (878), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 160/275 (58%), Positives = 212/275 (77%), Gaps = 8/275 (2%)

Query: 1   MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
           M Y++GLGLGD KDITVKGLE+V++C RVYLEAYTS+L     + ++ FYG+ +++ADRE
Sbjct: 1   MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGK-EALEEFYGRKLVVADRE 59

Query: 61  MVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGC 120
            VE  +D IL +AD+ DVA LVVGDP+GATTH+DLVLRA +  IP +V+HNASI+NA GC
Sbjct: 60  EVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMNAVGC 119

Query: 121 CGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKT 180
           CGLQLY FGETVSI FWT++W+P+SF+DK+ +N+  G+HTLCLLDI+VKE +LE+L K  
Sbjct: 120 CGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENLIKGR 179

Query: 181 RQYLPPRFMSVSQAAQQLVEITKTK------PGLSTADLAVGIARVGSETQHIVATSLSN 234
           + Y PPR+MSV+QAAQQL+EI + +      P ++   L VG+ARVG++ Q I A +L  
Sbjct: 180 KIYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETLCVGLARVGADDQKIAAGTLRQ 239

Query: 235 MTETDMGKPLHSLIIV-GNIHPVESEFLAQYSTQE 268
           M   D+G+PLHSLII  G+IHP+E E L+ +S  E
Sbjct: 240 MCTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPE 274
S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 9EC: 8
>sp|Q9CWQ0|DPH5_MOUSE Diphthine synthase OS=Mus musculus GN=Dph5 PE=2 SV=2 Back     alignment and function description
>sp|Q5E982|DPH5_BOVIN Diphthine synthase OS=Bos taurus GN=DPH5 PE=2 SV=1 Back     alignment and function description
>sp|O81769|DPH5_ARATH Probable diphthine synthase OS=Arabidopsis thaliana GN=At4g31790 PE=2 SV=1 Back     alignment and function description
>sp|Q5BFG0|DPH5_EMENI Diphthine synthase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dph5 PE=3 SV=2 Back     alignment and function description
>sp|Q6BN80|DPH5_DEBHA Diphthine synthase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|Q6C1E0|DPH5_YARLI Diphthine synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|Q59NX9|DPH5_CANAL Diphthine synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|Q6FXK9|DPH5_CANGA Diphthine synthase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DPH5 PE=3 SV=1 Back     alignment and function description
>sp|O74898|DPH5_SCHPO Diphthine synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dph5 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
156551147283 PREDICTED: diphthine synthase [Nasonia v 0.974 0.932 0.659 1e-101
189237643273 PREDICTED: similar to Diphthamide methyl 0.970 0.963 0.640 5e-98
195390628281 GJ24174 [Drosophila virilis] gi|19415205 0.977 0.943 0.630 5e-98
195444582281 GK11785 [Drosophila willistoni] gi|19416 0.977 0.943 0.622 3e-97
195112792281 GI10523 [Drosophila mojavensis] gi|19391 0.977 0.943 0.626 3e-97
307189822283 Diphthine synthase [Camponotus floridanu 0.974 0.932 0.630 4e-97
195158477281 GL13679 [Drosophila persimilis] gi|19411 0.977 0.943 0.622 5e-97
158292140286 AGAP004412-PA [Anopheles gambiae str. PE 0.974 0.923 0.621 9e-97
198450113281 GA16151 [Drosophila pseudoobscura pseudo 0.977 0.943 0.622 9e-97
170045280301 diphthine synthase [Culex quinquefasciat 0.988 0.890 0.617 2e-96
>gi|156551147|ref|XP_001604120.1| PREDICTED: diphthine synthase [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/273 (65%), Positives = 224/273 (82%), Gaps = 9/273 (3%)

Query: 1   MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
           MFYV+GLGLGD KD+TVKGLEI+KKCDRVYLEAYTSIL       ++ FYG+ +IIADRE
Sbjct: 1   MFYVIGLGLGDAKDVTVKGLEIIKKCDRVYLEAYTSILTVGK-QKLEEFYGRSVIIADRE 59

Query: 61  MVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGC 120
           +VES +D IL NA+ +DVA LVVGDP+GATTHTDLVLRA++ NI  +VVHNASI+NA GC
Sbjct: 60  LVESGADEILENAEQQDVAFLVVGDPFGATTHTDLVLRAKEKNIKVQVVHNASIINAVGC 119

Query: 121 CGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKT 180
           CGLQLY++GE VSIP WTE+WKPDSFYDKI+EN  RGLHTLCLLDI+VKEPTLES+ KK 
Sbjct: 120 CGLQLYSYGEVVSIPLWTETWKPDSFYDKIIENYQRGLHTLCLLDIKVKEPTLESILKKK 179

Query: 181 RQYLPPRFMSVSQAAQQLVEI--TKTKPG-----LSTADLAVGIARVGSETQHIVATSLS 233
           + Y+PP+FMSV++AA QL++I   KTK       +S++ LAVG+ARVGS+ Q I   SLS
Sbjct: 180 KVYMPPKFMSVAEAADQLLQIIENKTKENEDKSSISSSSLAVGLARVGSDDQKIFVCSLS 239

Query: 234 NMTETDMGKPLHSLIIVGN-IHPVESEFLAQYS 265
            M++ D+G PLH L+I G+ +HP+ESE+L+QY+
Sbjct: 240 KMSKVDLGPPLHCLVIPGHSLHPLESEYLSQYA 272

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|189237643|ref|XP_966949.2| PREDICTED: similar to Diphthamide methyltransferase CG31289-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195390628|ref|XP_002053970.1| GJ24174 [Drosophila virilis] gi|194152056|gb|EDW67490.1| GJ24174 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195444582|ref|XP_002069933.1| GK11785 [Drosophila willistoni] gi|194166018|gb|EDW80919.1| GK11785 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|195112792|ref|XP_002000956.1| GI10523 [Drosophila mojavensis] gi|193917550|gb|EDW16417.1| GI10523 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|307189822|gb|EFN74094.1| Diphthine synthase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|195158477|ref|XP_002020112.1| GL13679 [Drosophila persimilis] gi|194116881|gb|EDW38924.1| GL13679 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|158292140|ref|XP_313697.4| AGAP004412-PA [Anopheles gambiae str. PEST] gi|157017293|gb|EAA09127.4| AGAP004412-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|198450113|ref|XP_001357855.2| GA16151 [Drosophila pseudoobscura pseudoobscura] gi|198130899|gb|EAL26990.2| GA16151 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|170045280|ref|XP_001850243.1| diphthine synthase [Culex quinquefasciatus] gi|167868230|gb|EDS31613.1| diphthine synthase [Culex quinquefasciatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
FB|FBgn0024558281 Dph5 "Diphthamide methyltransf 0.974 0.939 0.621 8.6e-88
UNIPROTKB|Q9H2P9285 DPH5 "Diphthine synthase" [Hom 0.985 0.936 0.581 5.6e-84
MGI|MGI:1916990281 Dph5 "DPH5 homolog (S. cerevis 0.985 0.950 0.574 3.1e-83
UNIPROTKB|F1S569285 DPH5 "Uncharacterized protein" 0.985 0.936 0.585 3.9e-83
RGD|1307867281 Dph5 "DPH5 homolog (S. cerevis 0.985 0.950 0.574 5e-83
UNIPROTKB|E2RQL8280 DPH5 "Uncharacterized protein" 0.974 0.942 0.580 8.2e-83
UNIPROTKB|Q5E982285 DPH5 "Diphthine synthase" [Bos 0.985 0.936 0.570 2.8e-82
ZFIN|ZDB-GENE-041114-85288 dph5 "DPH5 homolog (S. cerevis 0.985 0.927 0.580 3.6e-82
UNIPROTKB|F1P418286 DPH5 "Uncharacterized protein" 0.974 0.923 0.579 1.2e-81
WB|WBGene00007194274 B0491.7 [Caenorhabditis elegan 0.974 0.963 0.583 3.7e-80
FB|FBgn0024558 Dph5 "Diphthamide methyltransferase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 169/272 (62%), Positives = 211/272 (77%)

Query:     1 MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
             MFY++GLGLGD+KDITVKGLEIVK+C RVYLE YTSIL    ++DM+ FYG+ +++ADR+
Sbjct:     1 MFYLIGLGLGDLKDITVKGLEIVKQCSRVYLEMYTSIL-GCSLEDMQEFYGRPLLLADRD 59

Query:    61 MVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGC 120
             +VE  +D IL  A   DVALLVVGDP+GATTHTD +LRA++ NIP KV+HNASI+NA GC
Sbjct:    60 LVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKEKNIPYKVIHNASIMNAVGC 119

Query:   121 CGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKT 180
             CGLQLY FGETVSIP+W E+WKPDSFYDKI  N+   +HTLCLLDI+VKEPT ESL +K 
Sbjct:   120 CGLQLYKFGETVSIPYWDETWKPDSFYDKIKLNRLHNMHTLCLLDIKVKEPTPESLMRKR 179

Query:   181 RQYLPPRFMSVSQAAQQLVEITKTKPGL--STA----DLAVGIARVGSETQHIVATSLSN 234
             ++Y+PPRFM+V++AA QL+ I + K  L  +T      L VG+ARVG E+Q I   +L  
Sbjct:   180 KEYMPPRFMTVAEAAHQLLSIVEKKDSLEKNTVLNEQSLCVGLARVGQESQQIAVGTLLE 239

Query:   235 MTETDMGKPLHSLIIVGN-IHPVESEFLAQYS 265
             M  TD+G PLHSLII    +HP+E EFL QY+
Sbjct:   240 MRSTDLGGPLHSLIIPAKEMHPLEVEFLQQYA 271
GO:0004164 "diphthine synthase activity" evidence=ISS
GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=ISS
UNIPROTKB|Q9H2P9 DPH5 "Diphthine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1916990 Dph5 "DPH5 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1S569 DPH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1307867 Dph5 "DPH5 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQL8 DPH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E982 DPH5 "Diphthine synthase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-85 dph5 "DPH5 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P418 DPH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00007194 B0491.7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CWQ0DPH5_MOUSE2, ., 1, ., 1, ., 9, 80.57450.98520.9501yesN/A
A0B879DPHB_METTP2, ., 1, ., 1, ., 9, 80.38570.89660.9169yesN/A
B9LV13DPHB_HALLT2, ., 1, ., 1, ., 9, 80.37210.91140.9320yesN/A
Q12XB4DPHB_METBU2, ., 1, ., 1, ., 9, 80.38230.91880.9325yesN/A
Q75JG8DPH5_DICDI2, ., 1, ., 1, ., 9, 80.50180.98890.9816yesN/A
Q18JS3DPHB_HALWD2, ., 1, ., 1, ., 9, 80.36470.84500.8807yesN/A
Q6C1E0DPH5_YARLI2, ., 1, ., 1, ., 9, 80.55220.97780.8833yesN/A
Q5V2B7DPHB_HALMA2, ., 1, ., 1, ., 9, 80.36980.90770.9498yesN/A
Q6MY91DPH5_ASPFU2, ., 1, ., 1, ., 9, 80.54210.99260.9438yesN/A
A6VJP1DPHB_METM72, ., 1, ., 1, ., 9, 80.34600.90770.9647yesN/A
C5A3K4DPHB_THEGJ2, ., 1, ., 1, ., 9, 80.37450.91880.9431yesN/A
Q0W085DPHB_UNCMA2, ., 1, ., 1, ., 9, 80.36860.92250.9727yesN/A
A3CWF9DPHB_METMJ2, ., 1, ., 1, ., 9, 80.40600.91140.988yesN/A
Q8PUH9DPHB_METMA2, ., 1, ., 1, ., 9, 80.40740.90770.9248yesN/A
A6US81DPHB_METVS2, ., 1, ., 1, ., 9, 80.35740.90770.9647yesN/A
O27902DPHB_METTH2, ., 1, ., 1, ., 9, 80.37120.91880.9431yesN/A
A2SQF6DPHB_METLZ2, ., 1, ., 1, ., 9, 80.39320.91140.9801yesN/A
Q8TR14DPHB_METAC2, ., 1, ., 1, ., 9, 80.38510.90770.9248yesN/A
Q9UZ31DPHB_PYRAB2, ., 1, ., 1, ., 9, 80.38110.91140.9427yesN/A
B6YXP9DPHB_THEON2, ., 1, ., 1, ., 9, 80.38340.91510.9393yesN/A
A4FYP1DPHB_METM52, ., 1, ., 1, ., 9, 80.35360.90770.9647yesN/A
Q6FXK9DPH5_CANGA2, ., 1, ., 1, ., 9, 80.57080.92980.8456yesN/A
O58456DPHB_PYRHO2, ., 1, ., 1, ., 9, 80.38720.91510.9358yesN/A
A6UU49DPHB_META32, ., 1, ., 1, ., 9, 80.36880.90770.9571yesN/A
Q6CIZ1DPH5_KLULA2, ., 1, ., 1, ., 9, 80.52800.97410.8859yesN/A
Q2NFJ8DPHB_METST2, ., 1, ., 1, ., 9, 80.3750.90400.9315yesN/A
B8GIF8DPHB_METPE2, ., 1, ., 1, ., 9, 80.39840.90770.9800yesN/A
B0R4W9DPHB_HALS32, ., 1, ., 1, ., 9, 80.34900.92250.9615yesN/A
O74898DPH5_SCHPO2, ., 1, ., 1, ., 9, 80.55970.97410.9328yesN/A
Q5E982DPH5_BOVIN2, ., 1, ., 1, ., 9, 80.56670.97780.9298yesN/A
Q3IS55DPHB_NATPD2, ., 1, ., 1, ., 9, 80.35420.88920.9060yesN/A
P32469DPH5_YEAST2, ., 1, ., 1, ., 9, 80.55110.92980.84yesN/A
Q6LZN6DPHB_METMP2, ., 1, ., 1, ., 9, 80.34980.90770.9647yesN/A
Q2FQ45DPHB_METHJ2, ., 1, ., 1, ., 9, 80.37960.90770.9761yesN/A
Q5BFG0DPH5_EMENI2, ., 1, ., 1, ., 9, 80.56040.99260.9438yesN/A
O81769DPH5_ARATH2, ., 1, ., 1, ., 9, 80.56980.97040.9494yesN/A
Q8U377DPHB_PYRFU2, ., 1, ., 1, ., 9, 80.36220.91140.9182yesN/A
Q59NX9DPH5_CANAL2, ., 1, ., 1, ., 9, 80.55050.97410.8829N/AN/A
A9A6D8DPHB_METM62, ., 1, ., 1, ., 9, 80.33840.90770.9647yesN/A
Q58670DPHB_METJA2, ., 1, ., 1, ., 9, 80.36500.91510.9649yesN/A
Q9HQK6DPHB_HALSA2, ., 1, ., 1, ., 9, 80.34900.92250.9615yesN/A
Q5JFE7DPHB_PYRKO2, ., 1, ., 1, ., 9, 80.36940.92250.9469yesN/A
O29866DPHB_ARCFU2, ., 1, ., 1, ., 9, 80.35580.87820.9482yesN/A
A7IA21DPHB_METB62, ., 1, ., 1, ., 9, 80.36840.90770.984yesN/A
Q467Z4DPHB_METBF2, ., 1, ., 1, ., 9, 80.38880.90770.9248yesN/A
Q7S949DPH5_NEUCR2, ., 1, ., 1, ., 9, 80.53840.98520.9303N/AN/A
Q754E7DPH5_ASHGO2, ., 1, ., 1, ., 9, 80.55110.92980.8456yesN/A
Q6BN80DPH5_DEBHA2, ., 1, ., 1, ., 9, 80.54300.97410.88yesN/A
Q4HZI0DPH5_GIBZE2, ., 1, ., 1, ., 9, 80.56660.97410.9198yesN/A
Q9H2P9DPH5_HUMAN2, ., 1, ., 1, ., 9, 80.58180.98520.9368yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.10.963
4th Layer2.1.1.980.946

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
PTZ00175270 PTZ00175, PTZ00175, diphthine synthase; Provisiona 1e-146
cd11647241 cd11647, Diphthine_synthase, Diphthine synthase, a 1e-136
COG1798260 COG1798, DPH5, Diphthamide biosynthesis methyltran 1e-108
PRK04160258 PRK04160, PRK04160, diphthine synthase; Provisiona 1e-96
TIGR00522257 TIGR00522, dph5, diphthine synthase 2e-95
pfam00590202 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porp 8e-16
cd09815224 cd09815, TP_methylase, S-AdoMet dependent tetrapyr 3e-10
cd11645226 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methy 3e-09
COG2243234 COG2243, CobF, Precorrin-2 methylase [Coenzyme met 1e-08
TIGR01467230 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransf 2e-06
COG3956 488 COG3956, COG3956, Protein containing tetrapyrrole 2e-06
PRK05576229 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methy 4e-05
cd11644201 cd11644, Precorrin-6Y-methylase, Precorrin-6Y meth 6e-05
COG2875254 COG2875, CobM, Precorrin-4 methylase [Coenzyme met 2e-04
COG1010249 COG1010, CobJ, Precorrin-3B methylase [Coenzyme me 2e-04
PRK05787210 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methy 3e-04
cd11641228 cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methy 8e-04
COG2241210 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme 0.001
TIGR01466239 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltrans 0.003
>gnl|CDD|185500 PTZ00175, PTZ00175, diphthine synthase; Provisional Back     alignment and domain information 
 Score =  411 bits (1058), Expect = e-146
 Identities = 156/268 (58%), Positives = 199/268 (74%), Gaps = 3/268 (1%)

Query: 1   MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
           M Y++GLGLGD KDITVKGLE VK  D VYLE+YTSILI+   + ++ FYGK +I ADRE
Sbjct: 2   MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSILINSNKEKLEEFYGKPVIEADRE 61

Query: 61  MVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGC 120
           MVE   D IL  A  ++VA LVVGDP+ ATTHTDL LRA++  I  +V+HNASI+NA GC
Sbjct: 62  MVEEGCDEILEEAKEKNVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGC 121

Query: 121 CGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKT 180
            GLQLY FGETVSIPF+TE+WKPDSFYDKI  N+  GLHTLCLLDI+VKE ++E+L K  
Sbjct: 122 TGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDNGLHTLCLLDIKVKERSVENLMKGR 181

Query: 181 RQYLPPRFMSVSQAAQQLVEITKTKPGLSTAD--LAVGIARVGSETQHIVATSLSNMTET 238
           + Y PPR+M+++QA +QL+E+ + K G   A+  L VG+ARVGS+ Q IV+ +L ++ + 
Sbjct: 182 KIYEPPRYMTINQAIEQLLEVEEKKGGGVIAEDTLVVGVARVGSDDQQIVSGTLEDLLDV 241

Query: 239 DMGKPLHSLIIVG-NIHPVESEFLAQYS 265
           D G PLHSL+I    +H +E EF   Y 
Sbjct: 242 DFGPPLHSLVICAPTLHDIEEEFFELYR 269

Length = 270
>gnl|CDD|212506 cd11647, Diphthine_synthase, Diphthine synthase, also known as DPH5 Back     alignment and domain information
>gnl|CDD|224711 COG1798, DPH5, Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235231 PRK04160, PRK04160, diphthine synthase; Provisional Back     alignment and domain information
>gnl|CDD|233007 TIGR00522, dph5, diphthine synthase Back     alignment and domain information
>gnl|CDD|216012 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases Back     alignment and domain information
>gnl|CDD|212499 cd09815, TP_methylase, S-AdoMet dependent tetrapyrrole methylases Back     alignment and domain information
>gnl|CDD|212504 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL Back     alignment and domain information
>gnl|CDD|225152 COG2243, CobF, Precorrin-2 methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|233425 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransferase Back     alignment and domain information
>gnl|CDD|226465 COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|235512 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methyltransferase; Validated Back     alignment and domain information
>gnl|CDD|212503 cd11644, Precorrin-6Y-methylase, Precorrin-6Y methyltransferase, the cobalamin biosynthesis enzyme CbiE Back     alignment and domain information
>gnl|CDD|225430 COG2875, CobM, Precorrin-4 methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|223942 COG1010, CobJ, Precorrin-3B methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235609 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methyltransferase; Validated Back     alignment and domain information
>gnl|CDD|212500 cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methyltransferase (CbiF/CobM) Back     alignment and domain information
>gnl|CDD|225150 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|233424 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
PTZ00175270 diphthine synthase; Provisional 100.0
KOG3123|consensus272 100.0
TIGR00522257 dph5 diphthine synthase. This protein participates 100.0
COG1798260 DPH5 Diphthamide biosynthesis methyltransferase [T 100.0
PRK04160258 diphthine synthase; Provisional 100.0
COG2875254 CobM Precorrin-4 methylase [Coenzyme metabolism] 100.0
PRK06136249 uroporphyrin-III C-methyltransferase; Reviewed 100.0
COG0007244 CysG Uroporphyrinogen-III methylase [Coenzyme meta 100.0
PRK07168 474 bifunctional uroporphyrinogen-III methyltransferas 100.0
TIGR01469236 cobA_cysG_Cterm uroporphyrin-III C-methyltransfera 100.0
TIGR01465229 cobM_cbiF precorrin-4 C11-methyltransferase. This 100.0
PRK15473257 cbiF cobalt-precorrin-4 C(11)-methyltransferase; P 100.0
COG2243234 CobF Precorrin-2 methylase [Coenzyme metabolism] 100.0
PRK05948238 precorrin-2 methyltransferase; Provisional 100.0
PLN02625263 uroporphyrin-III C-methyltransferase 100.0
PRK15478241 cbiH cobalt-precorrin-3B C(17)-methyltransferase; 100.0
PRK10637457 cysG siroheme synthase; Provisional 100.0
PRK05765246 precorrin-3B C17-methyltransferase; Provisional 100.0
COG2241210 CobL Precorrin-6B methylase 1 [Coenzyme metabolism 100.0
PRK05787210 cobalt-precorrin-6Y C(5)-methyltransferase; Valida 100.0
PRK05990241 precorrin-2 C(20)-methyltransferase; Reviewed 100.0
TIGR01467230 cobI_cbiL precorrin-2 C20-methyltransferase. This 100.0
TIGR01466239 cobJ_cbiH precorrin-3B C17-methyltransferase. This 100.0
PF00590210 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Meth 100.0
COG1010249 CobJ Precorrin-3B methylase [Coenzyme metabolism] 100.0
TIGR02467204 CbiE precorrin-6y C5,15-methyltransferase (decarbo 100.0
PRK05576229 cobalt-precorrin-2 C(20)-methyltransferase; Valida 100.0
PRK05991250 precorrin-3B C17-methyltransferase; Provisional 100.0
PRK14994287 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O- 100.0
PRK08284253 precorrin 6A synthase; Provisional 99.97
TIGR02434249 CobF precorrin-6A synthase (deacetylating). This m 99.97
KOG1527|consensus506 99.96
COG0313275 Predicted methyltransferases [General function pre 99.92
TIGR00096276 probable S-adenosylmethionine-dependent methyltran 99.88
COG3956 488 Protein containing tetrapyrrole methyltransferase 99.63
>PTZ00175 diphthine synthase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-51  Score=358.45  Aligned_cols=264  Identities=58%  Similarity=0.983  Sum_probs=237.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHhhCCEEEEcCcccccc-cCchhHhhhhcCcceeecchhhHHHHHHHHHHhcCCCCEE
Q psy11146          1 MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILI-DDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVA   79 (271)
Q Consensus         1 ml~iVG~GPGdp~llT~~A~~~L~~aDvv~~~~~~s~~~-~~~~~~l~~~~~~~v~~~~~~~~~~~~~~i~~~~~~~~V~   79 (271)
                      |||+||+|||||++||+||+++|++||+|+++.++|... .. .+.++.+++++....+++.+++.++++++.+++++|+
T Consensus         2 mlylVG~GpGdp~lLTlkal~~L~~ADvV~~d~~ts~l~~~~-~~~l~~~~gk~~~~~~r~~~e~~~~~ii~~a~~~~Vv   80 (270)
T PTZ00175          2 MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSILINSN-KEKLEEFYGKPVIEADREMVEEGCDEILEEAKEKNVA   80 (270)
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEecccchhccCC-HHHHHHhcCCeeEecCccCHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999999998765421 12 4455556676655556656666667788888778899


Q ss_pred             EEecCCCCCCCcHHHHHHHHhcCCCCEEEEcCchHHHHHHHcCCccccccceeEEeeecCCCCCCchhhHHHhhhccCcc
Q psy11146         80 LLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLH  159 (271)
Q Consensus        80 ~l~~GDP~~~~~~~~l~~~~~~~~~~v~iiPGiSs~~a~a~~g~~l~~~~~~v~i~~~~~~~~~~~~~~~i~~~~~~~~~  159 (271)
                      +|++|||++|+++.++..++.+.|+++++|||+|+++|++.+|+++++||.++++++.++|+.|.++++.++.|+..++|
T Consensus        81 ~L~~GDP~i~~t~~~l~~~~~~~gi~vevIPGvSi~sA~~~~Gl~~~~fg~~~sv~~~t~~~~~~s~~~~i~~n~~~glh  160 (270)
T PTZ00175         81 FLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDNGLH  160 (270)
T ss_pred             EEECCCCCccCCHHHHHHHHHHCCCcEEEECCcCHHHHHhhcCCCcCCCCceEEEEEEeCCCCCCChhHHHHHHHHcCCc
Confidence            99999999999999998888889999999999999998888999999999999999999999999999999999999999


Q ss_pred             eeeeecccCCccchHHHhhcccccCCeeeccHHHHHHHHHHhhhcC--CCCCCCCeEEEEeccCCCCeEEEEeeccchhh
Q psy11146        160 TLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTK--PGLSTADLAVGIARVGSETQHIVATSLSNMTE  237 (271)
Q Consensus       160 ~~~l~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~~~~~~~v~v~~~l~~~~E~i~~~~l~~l~~  237 (271)
                      |++++|...+..++++++++...|++.+||++.+.+++|.++.+++  ++++++++++++.|+|+++|++..++|+++.+
T Consensus       161 Tl~lldi~~~~~~~~~~~~~~~~~~~~~~M~~~~a~~~l~~i~~~~~~~~~~~~t~~v~v~r~g~~~q~i~~gtL~~l~~  240 (270)
T PTZ00175        161 TLCLLDIKVKERSVENLMKGRKIYEPPRYMTINQAIEQLLEVEEKKGGGVIAEDTLVVGVARVGSDDQQIVSGTLEDLLD  240 (270)
T ss_pred             eEEEEeeeccccchhhhhccccccCCCcCCCHHHHHHHHHHHHHHHhcCCCCCCCeEEEEEECCCCCceEEEEEHHHHhh
Confidence            9999999888889999999999999999999999999999877653  57889999999999999999999999999998


Q ss_pred             ccCCCCceEEEEecc-CCcchHHHHHhhh
Q psy11146        238 TDMGKPLHSLIIVGN-IHPVESEFLAQYS  265 (271)
Q Consensus       238 ~~~~~~~~sliivg~-~~~~~~~~l~~~~  265 (271)
                      .+++.|++++||+|+ .|++|.|+|++|.
T Consensus       241 ~d~g~PlhsLIv~g~~Lh~~E~e~l~~~~  269 (270)
T PTZ00175        241 VDFGPPLHSLVICAPTLHDIEEEFFELYR  269 (270)
T ss_pred             cccCCCCEEEEEECCcCCHHHHHHHHHhh
Confidence            899999999999998 9999999999984

>KOG3123|consensus Back     alignment and domain information
>TIGR00522 dph5 diphthine synthase Back     alignment and domain information
>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04160 diphthine synthase; Provisional Back     alignment and domain information
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK06136 uroporphyrin-III C-methyltransferase; Reviewed Back     alignment and domain information
>COG0007 CysG Uroporphyrinogen-III methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed Back     alignment and domain information
>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase Back     alignment and domain information
>TIGR01465 cobM_cbiF precorrin-4 C11-methyltransferase Back     alignment and domain information
>PRK15473 cbiF cobalt-precorrin-4 C(11)-methyltransferase; Provisional Back     alignment and domain information
>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK05948 precorrin-2 methyltransferase; Provisional Back     alignment and domain information
>PLN02625 uroporphyrin-III C-methyltransferase Back     alignment and domain information
>PRK15478 cbiH cobalt-precorrin-3B C(17)-methyltransferase; Provisional Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>PRK05765 precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism] Back     alignment and domain information
>PRK05787 cobalt-precorrin-6Y C(5)-methyltransferase; Validated Back     alignment and domain information
>PRK05990 precorrin-2 C(20)-methyltransferase; Reviewed Back     alignment and domain information
>TIGR01467 cobI_cbiL precorrin-2 C20-methyltransferase Back     alignment and domain information
>TIGR01466 cobJ_cbiH precorrin-3B C17-methyltransferase Back     alignment and domain information
>PF00590 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Methylases Note this Prosite entry does not include all members of this family Back     alignment and domain information
>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02467 CbiE precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Back     alignment and domain information
>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated Back     alignment and domain information
>PRK05991 precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional Back     alignment and domain information
>PRK08284 precorrin 6A synthase; Provisional Back     alignment and domain information
>TIGR02434 CobF precorrin-6A synthase (deacetylating) Back     alignment and domain information
>KOG1527|consensus Back     alignment and domain information
>COG0313 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family Back     alignment and domain information
>COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
3i4t_A292 Crystal Structure Of Putative Diphthine Synthase Fr 1e-69
2egl_A265 Crystal Structure Of Glu171 To Lys Mutant Of Diphth 2e-47
2dsi_A265 Crystal Structure Of Glu171 To Arg Mutant Of Diphth 3e-47
2eh5_A265 Mutant L184m Structure Of Ph0725 From Pyrococcus Ho 3e-47
2eni_A265 Mutant F197m Structure Of Ph0725 From Pyrococcus Ho 4e-47
2pb5_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 4e-47
2egb_A265 Crystal Structure Of Glu140 To Asn Mutant Of Diphth 4e-47
2ed3_A265 Mutant I127m Structure Of Ph0725 From Pyrococcus Ho 4e-47
2dv5_A265 Crystal Structure Of Leu65 To Ala Mutant Of Diphthi 4e-47
2p5f_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 4e-47
2pcg_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 4e-47
2e08_A265 Crystal Structure Of Glu140 To Lys Mutant Of Diphth 4e-47
2ejz_A265 Structural Study Of Project Id Ph0725 From Pyrococc 5e-47
2e16_A265 Crystal Structure Of Glu140 To Arg Mutant Of Diphth 5e-47
2eeq_A265 Mutant Y29m Structure Of Ph0725 From Pyrococcus Hor 5e-47
2ehl_A265 Crystal Structure Of Thr146 To Arg Mutant Of Diphth 5e-47
2p9d_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2hr8_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2pck_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2ek2_A265 Structural Study Of Project Id Ph0725 From Pyrococc 5e-47
2dv3_A265 Crystal Structure Of Leu65 To Arg Mutant Of Diphthi 5e-47
2en5_A265 Mutant R262h Structure Of Ph0725 From Pyrococcus Ho 5e-47
2owg_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2e4r_A265 Mutant I253m Structure Of Ph0725 From Pyrococcus Ho 5e-47
2dv4_A265 Crystal Structure Of Leu65 To Gln Mutant Of Diphthi 5e-47
1wng_A265 Structural Study Of Project Id Ph0725 From Pyrococc 5e-47
2pb6_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2p5c_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2z6r_A265 Crystal Structure Of Lys49 To Arg Mutant Of Diphthi 5e-47
2p6i_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-47
2e4n_A265 Mutant V251m Structure Of Ph0725 From Pyrococcus Ho 5e-47
2emr_A265 Mutant L65m Structure Of Ph0725 From Pyrococcus Hor 6e-47
2egs_A265 Crystal Structure Of Leu261 To Met Mutant Of Diphth 6e-47
2owu_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 6e-47
2e8h_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 6e-47
2e17_A265 Crystal Structure Of Arg173 To Ala Mutant Of Diphth 6e-47
2dv7_A265 Crystal Structure Of Lys187 To Arg Mutant Of Diphth 6e-47
2dxx_A265 Crystal Structure Of Asn142 To Glu Mutant Of Diphth 6e-47
2pcm_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 6e-47
2el3_A265 Structural Study Of Project Id Ph0725 From Pyrococc 6e-47
2el1_A265 Structural Study Of Project Id Ph0725 From Pyrococc 6e-47
2ek3_A265 Structural Study Of Project Id Ph0725 From Pyrococc 6e-47
2ejk_A265 Mutant L38m Structure Of Ph0725 From Pyrococcus Hor 6e-47
2eh4_A265 Mutant T146m Structure Of Ph0725 From Pyrococcus Ho 8e-47
2e15_A265 Crystal Structure Of Arg173 To Asn Mutant Of Diphth 8e-47
2ehc_A265 Crystal Structure Of Asn69 To Lys Mutant Of Diphthi 8e-47
2dxw_A265 Crystal Structure Of Glu54 To Lys Mutant Of Diphthi 9e-47
2p6k_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 9e-47
2dsg_A265 Crystal Structure Of Lys26 To Arg Mutant Of Diphthi 9e-47
2pca_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 9e-47
2eld_A265 Mutant L160m Structure Of Ph0725 From Pyrococcus Ho 9e-47
2el2_A265 Structural Study Of Project Id Ph0725 From Pyrococc 9e-47
2el0_A265 Structural Study Of Project Id Ph0725 From Pyrococc 9e-47
2eka_A265 Structural Study Of Project Id Ph0725 From Pyrococc 9e-47
2ek7_A265 Structural Study Of Project Id Ph0725 From Pyrococc 9e-47
2ek4_A265 Structural Study Of Project Id Ph0725 From Pyrococc 9e-47
2hut_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 9e-47
2huq_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 9e-47
2ejj_A265 Mutant K129m Structure Of Ph0725 From Pyrococcus Ho 9e-47
2e8s_A265 Structural Study Of Project Id Ph0725 From Pyrococc 1e-46
2dxv_A265 Crystal Structure Of Glu54 To His Mutant Of Diphthi 1e-46
2e7r_A265 Crystal Structure Of Glu54 To Arg Mutant Of Diphthi 1e-46
2eh2_A265 Mutant V18m Structure Of Ph0725 From Pyrococcus Hor 1e-46
2owv_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 1e-46
2pb4_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 1e-46
2e07_A265 Crystal Structure Of Asp79 To Glu Mutant Of Diphthi 2e-46
2ele_A265 Mutant V18c Structure Of Ph0725 From Pyrococcus Hor 2e-46
2huv_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 2e-46
2ed5_A265 Mutant S147m Structure Of Ph0725 From Pyrococcus Ho 2e-46
2pch_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 3e-46
2dsh_A265 Crystal Structure Of Lys26 To Tyr Mutant Of Diphthi 3e-46
2e8r_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-46
2e8q_A265 Structural Study Of Project Id Ph0725 From Pyrococc 3e-46
2emu_A265 Mutant L21h Structure Of Ph0725 From Pyrococcus Hor 3e-46
2p6d_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 4e-46
2p2x_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 5e-46
2hux_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 6e-46
1vce_A265 Crystal Structure Of Project Id Ph0725 From Pyrococ 7e-46
2owf_A265 Crystal Structure Of Ph0725 From Pyrococcus Horikos 1e-45
1vhv_A268 Crystal Structure Of Diphthine Synthase Length = 26 5e-34
1wde_A294 Crystal Structure Of The Conserved Hypothetical Pro 3e-15
>pdb|3I4T|A Chain A, Crystal Structure Of Putative Diphthine Synthase From Entamoeba Histolytica Length = 292 Back     alignment and structure 
Iteration: 1

 Score =  259 bits (662), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/251 (50%), Positives = 176/251 (70%), Gaps = 3/251 (1%)
Query: 1   MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
           M Y++GLGL D KDITV+GLE VK CD V+LE YT+IL  D+   ++ FYGK +II DR+
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCDVAK-LEEFYGKKVIIGDRD 80
Query: 61  MVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGC 120
           +VE+ +D IL  A  ++VALLVVGD YGATTH+D+ +R ++  I  KV+HNASI+NA GC
Sbjct: 81  LVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGC 140
Query: 121 CGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKT 180
            GLQLY FG+TVS+ FW+E W+P S+Y KI  N+   +HTL LLDI+VKE + ES+ K  
Sbjct: 141 SGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESIIKGR 200
Query: 181 RQYLPPRFMSVSQAAQQLVEITKTKP-GLSTAD-LAVGIARVGSETQHIVATSLSNMTET 238
             + PPR+M+++Q  +QL+E+ K +  G+   D + VG+ARV    Q IV   + ++   
Sbjct: 201 DIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKDLLHY 260
Query: 239 DMGKPLHSLII 249
           D G P+H L+I
Sbjct: 261 DFGAPMHCLLI 271
>pdb|2EGL|A Chain A, Crystal Structure Of Glu171 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DSI|A Chain A, Crystal Structure Of Glu171 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EH5|A Chain A, Mutant L184m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2ENI|A Chain A, Mutant F197m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PB5|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EGB|A Chain A, Crystal Structure Of Glu140 To Asn Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2ED3|A Chain A, Mutant I127m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DV5|A Chain A, Crystal Structure Of Leu65 To Ala Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2P5F|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E08|A Chain A, Crystal Structure Of Glu140 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EJZ|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (y11m) Length = 265 Back     alignment and structure
>pdb|2E16|A Chain A, Crystal Structure Of Glu140 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EEQ|A Chain A, Mutant Y29m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EHL|A Chain A, Crystal Structure Of Thr146 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2P9D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HR8|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCK|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EK2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (E140m) Length = 265 Back     alignment and structure
>pdb|2DV3|A Chain A, Crystal Structure Of Leu65 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EN5|A Chain A, Mutant R262h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2OWG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E4R|A Chain A, Mutant I253m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DV4|A Chain A, Crystal Structure Of Leu65 To Gln Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|1WNG|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PB6|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P5C|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2Z6R|A Chain A, Crystal Structure Of Lys49 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2P6I|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E4N|A Chain A, Mutant V251m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EMR|A Chain A, Mutant L65m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EGS|A Chain A, Crystal Structure Of Leu261 To Met Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2OWU|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E8H|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E17|A Chain A, Crystal Structure Of Arg173 To Ala Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DV7|A Chain A, Crystal Structure Of Lys187 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DXX|A Chain A, Crystal Structure Of Asn142 To Glu Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2PCM|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EL3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L242m) Length = 265 Back     alignment and structure
>pdb|2EL1|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L44m) Length = 265 Back     alignment and structure
>pdb|2EK3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L3m) Length = 265 Back     alignment and structure
>pdb|2EJK|A Chain A, Mutant L38m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EH4|A Chain A, Mutant T146m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E15|A Chain A, Crystal Structure Of Arg173 To Asn Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EHC|A Chain A, Crystal Structure Of Asn69 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2DXW|A Chain A, Crystal Structure Of Glu54 To Lys Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2P6K|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DSG|A Chain A, Crystal Structure Of Lys26 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2PCA|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2ELD|A Chain A, Mutant L160m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EL2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (l185m) Length = 265 Back     alignment and structure
>pdb|2EL0|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L21m) Length = 265 Back     alignment and structure
>pdb|2EKA|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L202m) Length = 265 Back     alignment and structure
>pdb|2EK7|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L163m) Length = 265 Back     alignment and structure
>pdb|2EK4|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L8m) Length = 265 Back     alignment and structure
>pdb|2HUT|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HUQ|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2EJJ|A Chain A, Mutant K129m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E8S|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DXV|A Chain A, Crystal Structure Of Glu54 To His Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2E7R|A Chain A, Crystal Structure Of Glu54 To Arg Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2EH2|A Chain A, Mutant V18m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2OWV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PB4|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E07|A Chain A, Crystal Structure Of Asp79 To Glu Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2ELE|A Chain A, Mutant V18c Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HUV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2ED5|A Chain A, Mutant S147m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2PCH|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2DSH|A Chain A, Crystal Structure Of Lys26 To Tyr Mutant Of Diphthine Synthase Length = 265 Back     alignment and structure
>pdb|2E8R|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2E8Q|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (K19m) Length = 265 Back     alignment and structure
>pdb|2EMU|A Chain A, Mutant L21h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P6D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2P2X|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2HUX|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|1VCE|A Chain A, Crystal Structure Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|2OWF|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265 Back     alignment and structure
>pdb|1VHV|A Chain A, Crystal Structure Of Diphthine Synthase Length = 268 Back     alignment and structure
>pdb|1WDE|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein Ape0931 From Aeropyrum Pernix K1 Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
3i4t_A292 Diphthine synthase; niaid, ssgcid, infectious dise 3e-95
2z6r_A265 Diphthine synthase; methyltransferase, S-adenosyl- 3e-92
1wde_A294 Probable diphthine synthase; structural genomics, 2e-86
1vhv_A268 Diphthine synthase; structural genomics, transfera 1e-85
2qbu_A232 Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me 6e-09
2e0n_A259 Precorrin-2 C20-methyltransferase; cobalt-factor I 2e-07
2npn_A251 Putative cobalamin synthesis related protein; COBF 3e-07
3nut_A251 Precorrin-3 methylase; vitamin B12 pathway, cobala 6e-07
3nd1_A275 Precorrin-6A synthase/COBF protein; methyltransfer 1e-05
2bb3_A221 Cobalamin biosynthesis precorrin-6Y methylase (CB; 2e-04
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Length = 292 Back     alignment and structure
 Score =  280 bits (718), Expect = 3e-95
 Identities = 127/268 (47%), Positives = 177/268 (66%), Gaps = 4/268 (1%)

Query: 1   MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
           M Y++GLGL D KDITV+GLE VK CD V+LE YT+IL  D+   ++ FYGK +II DR+
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCDV-AKLEEFYGKKVIIGDRD 80

Query: 61  MVESASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGC 120
           +VE+ +D IL  A  ++VALLVVGD YGATTH+D+ +R ++  I  KV+HNASI+NA GC
Sbjct: 81  LVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGC 140

Query: 121 CGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKKT 180
            GLQLY FG+TVS+ FW+E W+P S+Y KI  N+   +HTL LLDI+VKE + ES+ K  
Sbjct: 141 SGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESIIKGR 200

Query: 181 RQYLPPRFMSVSQAAQQLVEITK--TKPGLSTADLAVGIARVGSETQHIVATSLSNMTET 238
             + PPR+M+++Q  +QL+E+ K           + VG+ARV    Q IV   + ++   
Sbjct: 201 DIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKDLLHY 260

Query: 239 DMGKPLHSLIIVG-NIHPVESEFLAQYS 265
           D G P+H L+I    +   E + L  + 
Sbjct: 261 DFGAPMHCLLIPAPQVDDPELDQLEYFK 288
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Length = 265 Back     alignment and structure
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Length = 294 Back     alignment and structure
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 268 Back     alignment and structure
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 232 Back     alignment and structure
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Length = 259 Back     alignment and structure
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Length = 251 Back     alignment and structure
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Length = 251 Back     alignment and structure
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Length = 275 Back     alignment and structure
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
3i4t_A292 Diphthine synthase; niaid, ssgcid, infectious dise 100.0
2z6r_A265 Diphthine synthase; methyltransferase, S-adenosyl- 100.0
1vhv_A268 Diphthine synthase; structural genomics, transfera 100.0
2ybo_A294 Methyltransferase; SUMT, NIRE, heme D1 biosynthesi 100.0
1wde_A294 Probable diphthine synthase; structural genomics, 100.0
1s4d_A280 Uroporphyrin-III C-methyltransferase; tetrapyrrole 100.0
4e16_A253 Precorrin-4 C(11)-methyltransferase; structural ge 100.0
1cbf_A285 Cobalt-precorrin-4 transmethylase; precorrin-4 met 100.0
3ndc_A264 Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH 100.0
1ve2_A235 Uroporphyrin-III C-methyltransferase; heme, biosyn 100.0
1pjq_A457 CYSG, siroheme synthase; rossman fold, nucleotide 100.0
1va0_A239 Uroporphyrin-III C-methyltransferase; structural g 100.0
3nut_A251 Precorrin-3 methylase; vitamin B12 pathway, cobala 100.0
1wyz_A242 Putative S-adenosylmethionine-dependent methyltra; 100.0
2e0n_A259 Precorrin-2 C20-methyltransferase; cobalt-factor I 100.0
3kwp_A296 Predicted methyltransferase; putative methyltransf 100.0
2zvb_A295 Precorrin-3 C17-methyltransferase; plasmid, struct 100.0
2qbu_A232 Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me 100.0
2bb3_A221 Cobalamin biosynthesis precorrin-6Y methylase (CB; 99.97
2npn_A251 Putative cobalamin synthesis related protein; COBF 99.97
3nd1_A275 Precorrin-6A synthase/COBF protein; methyltransfer 99.97
3hh1_A117 Tetrapyrrole methylase family protein; chlorobium 99.9
3ffy_A115 Putative tetrapyrrole (corrin/porphyrin) methylas; 99.3
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Back     alignment and structure
Probab=100.00  E-value=1.4e-47  Score=336.64  Aligned_cols=266  Identities=48%  Similarity=0.829  Sum_probs=212.5

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHhhCCEEEEcCcccccccCchhHhhhhcCcceeecchhhHHHHHHHHHHhcCCCCEEE
Q psy11146          1 MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVAL   80 (271)
Q Consensus         1 ml~iVG~GPGdp~llT~~A~~~L~~aDvv~~~~~~s~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~i~~~~~~~~V~~   80 (271)
                      |||+||+|||||++||+||+++|++||+|+++.+++..+++ .+.|+.+.+++++..++...++..+.+++.+++++|++
T Consensus        22 ~l~lVG~GpGd~~~LT~rA~~~L~~ADvV~~e~~~s~~~~~-~~~L~~~~~~~~i~~~~~~~~~~~~~i~~~a~~~~Vv~  100 (292)
T 3i4t_A           22 MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCD-VAKLEEFYGKKVIIGDRDLVETEADQILEPAKTKNVAL  100 (292)
T ss_dssp             EEEEEECBSSSGGGSCHHHHHHHHHCSEEEECGGGGGSSSC-HHHHHHHHTSCCEEC-------CCCTTHHHHTTSEEEE
T ss_pred             EEEEEEECCCChHHhhHHHHHHHHhCCEEEEecccccccCC-HHHHHhCCCCeEEEcccccHHHHHHHHHHHhcCCCEEE
Confidence            69999999999999999999999999999998774432123 66777666666554444444444455777776689999


Q ss_pred             EecCCCCCCCcHHHHHHHHhcCCCCEEEEcCchHHHHHHHcCCccccccceeEEeeecCCCCCCchhhHHHhhhccCcce
Q psy11146         81 LVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAGCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHT  160 (271)
Q Consensus        81 l~~GDP~~~~~~~~l~~~~~~~~~~v~iiPGiSs~~a~a~~g~~l~~~~~~v~i~~~~~~~~~~~~~~~i~~~~~~~~~~  160 (271)
                      |++|||++|+++.+++.++.+.|+++++||||||++|+|++|+||++++.+.++.+.+.|++|.++++.+++++..+.++
T Consensus       101 L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p~~~~~~~~~~l~~~~~T  180 (292)
T 3i4t_A          101 LVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHT  180 (292)
T ss_dssp             EESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCCCTHHHHHHHHHHTTCBE
T ss_pred             EecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCCCccHHHHHHHhhcCCCe
Confidence            99999999999999887777789999999999999988999999999999999989999999988888888888889999


Q ss_pred             eeeecccCCccchHHHhhcccccCCeeeccHHHHHHHHHHhhhc--CCCCCCCCeEEEEeccCCCCeEEEEeeccchhhc
Q psy11146        161 LCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKT--KPGLSTADLAVGIARVGSETQHIVATSLSNMTET  238 (271)
Q Consensus       161 ~~l~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~~~~~--~~~~~~~~~v~v~~~l~~~~E~i~~~~l~~l~~~  238 (271)
                      ++++|...+...+++++++...|++..||+++++++.|.++.++  ..++++++++++++++|+++|+++.++++++.+.
T Consensus       181 lvl~d~~~~e~~~~~~~~~~~~y~p~r~m~~~~~~~~L~~~~~~l~~~g~~~dtpv~vv~~~t~~~E~i~~~tL~~l~~~  260 (292)
T 3i4t_A          181 LVLLDIKVKERSEESIIKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKDLLHY  260 (292)
T ss_dssp             EEEECEECCC-------------CCCEECCHHHHHHHHHHHHHHHCCCSCCTTCEEEEEESTTSTTCEEEEEEHHHHTTC
T ss_pred             EEEEeccccccchhhccccccccCCccccCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeecCCCceEEEEEEHHHHHhh
Confidence            99999887777788888887888888899999999988885432  2588889999999999999999999999999887


Q ss_pred             cCCCCceEEEEecc-CCcchHHHHHhhhcc
Q psy11146        239 DMGKPLHSLIIVGN-IHPVESEFLAQYSTQ  267 (271)
Q Consensus       239 ~~~~~~~sliivg~-~~~~~~~~l~~~~~~  267 (271)
                      +++.+..+++|+|+ .+++|+|+|+||...
T Consensus       261 ~~~~~~~~liivG~~l~~~e~e~l~~~~~~  290 (292)
T 3i4t_A          261 DFGAPMHCLLIPAPQVDDPELDQLEYFKYK  290 (292)
T ss_dssp             CCCSSCEEEEECCSSCCHHHHHHHGGGBCC
T ss_pred             hcCCCCCEEEEECCcCCHHHHHHHHHhccC
Confidence            76667789999996 889999999999644
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Back     alignment and structure
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Back     alignment and structure
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A* Back     alignment and structure
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Back     alignment and structure
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1 Back     alignment and structure
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile} Back     alignment and structure
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A* Back     alignment and structure
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A Back     alignment and structure
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1 Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Back     alignment and structure
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A Back     alignment and structure
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Back     alignment and structure
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1 Back     alignment and structure
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Back     alignment and structure
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367} Back     alignment and structure
>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A* Back     alignment and structure
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Back     alignment and structure
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Back     alignment and structure
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Back     alignment and structure
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 271
d2deka1265 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyroc 4e-67
d1wdea_289 c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum 1e-57
d1vhva_251 c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon A 6e-56
d1ve2a1235 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransf 8e-15
d1pjqa2242 c.90.1.1 (A:216-457) Siroheme synthase CysG, domai 1e-13
d1s4da_265 c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase 3e-13
d1cbfa_239 c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase 4e-13
d1va0a1225 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 { 3e-11
d2bb3a1195 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Ar 2e-06
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Length = 265 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  207 bits (527), Expect = 4e-67
 Identities = 98/267 (36%), Positives = 150/267 (56%), Gaps = 18/267 (6%)

Query: 1   MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADRE 60
           + Y +GLGL D +DITVKGLEI KKCD V+ E YTS++    +  ++   GK+I +  RE
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSRE 61

Query: 61  MVES-ASDVILHNADVEDVALLVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAAG 119
            VE    +++L  A   DVA L  GDP  ATTH +L +RA+++ + + V+H  SI +A G
Sbjct: 62  DVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVG 121

Query: 120 CCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLHTLCLLDIQVKEPTLESLTKK 179
             GL +Y FG++ ++ +   +W P S+YD I EN  RGLHTL  LDI+ ++         
Sbjct: 122 ITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK--------- 172

Query: 180 TRQYLPPRFMSVSQAAQQLVEITKT--KPGLSTADLAVGIARVGSETQHIVATSLSNMTE 237
                   +M+ ++A + L+++         +   L V +AR GS    I A  + ++  
Sbjct: 173 ------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIR 226

Query: 238 TDMGKPLHSLIIVGNIHPVESEFLAQY 264
            D G P H LI+ G +H VE+E+L + 
Sbjct: 227 EDFGDPPHILIVPGKLHIVEAEYLVEI 253
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Length = 289 Back     information, alignment and structure
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 251 Back     information, alignment and structure
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Length = 235 Back     information, alignment and structure
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Length = 242 Back     information, alignment and structure
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Length = 265 Back     information, alignment and structure
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Length = 239 Back     information, alignment and structure
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Length = 225 Back     information, alignment and structure
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Length = 195 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
d1vhva_251 Diphthine synthase, DphB {Archaeon Archaeoglobus f 100.0
d2deka1265 Diphthine synthase, DphB {Pyrococcus horikoshii [T 100.0
d1wdea_289 Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 100.0
d1s4da_265 Uroporphyrin-III C-methyltransferase (SUMT, UROM, 100.0
d1ve2a1235 Uroporphyrin-III C-methyltransferase (SUMT, UROM, 100.0
d1pjqa2242 Siroheme synthase CysG, domains 4 and 5 {Salmonell 100.0
d1cbfa_239 Cobalt precorrin-4 methyltransferase CbiF {Bacillu 100.0
d2bb3a1195 Precorrin-6y methylase CbiE {Archaeoglobus fulgidu 100.0
d1va0a1225 Hypothetical protein TTHA0667 {Thermus thermophilu 99.97
d1wyza1233 Putative methytransferase BT4190 {Bacteroides thet 99.95
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=5.8e-46  Score=319.43  Aligned_cols=242  Identities=37%  Similarity=0.612  Sum_probs=200.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHhhCCEEEEcCcccccccCchhHhhhhcCcceeecchhhHHHHHHHHHHhcCCCCEEE
Q psy11146          1 MFYVVGLGLGDVKDITVKGLEIVKKCDRVYLEAYTSILIDDIIDDMKSFYGKDIIIADREMVESASDVILHNADVEDVAL   80 (271)
Q Consensus         1 ml~iVG~GPGdp~llT~~A~~~L~~aDvv~~~~~~s~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~i~~~~~~~~V~~   80 (271)
                      |+|+||+|||||++||+||+++|++||+|+++.+++..... .+.+..++++++...++..+++..+.+++.+++++|++
T Consensus         2 mL~iVG~GpG~~~~iT~~a~~~l~~advv~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vv~   80 (251)
T d1vhva_           2 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKLLSS-IEEMEEFFGKRVVELERSDLEENSFRLIERAKSKSVVL   80 (251)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCCSSC-HHHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTSEEEE
T ss_pred             eEEEEeeCCCCHHHHHHHHHHHHHcCCEEEEcCCCccchhc-HHHHHHHhCCccccCcchhHHHHHHHHHHHhcCCcEEE
Confidence            89999999999999999999999999999998876553222 45555556666655555555555667778777799999


Q ss_pred             EecCCCCCCCcHHHHHHHHhcCCCCEEEEcCchHHHHH-HHcCCccccccceeEEeeecCCCCCCchhhHHHhhhccCcc
Q psy11146         81 LVVGDPYGATTHTDLVLRARQSNIPTKVVHNASILNAA-GCCGLQLYNFGETVSIPFWTESWKPDSFYDKIVENKSRGLH  159 (271)
Q Consensus        81 l~~GDP~~~~~~~~l~~~~~~~~~~v~iiPGiSs~~a~-a~~g~~l~~~~~~v~i~~~~~~~~~~~~~~~i~~~~~~~~~  159 (271)
                      |++|||++|+++.++...+.+.|++++|+|||||++++ |++|+||++++.++++++    ..+.++++.+..+...+.+
T Consensus        81 L~~GDP~i~~~~~~l~~~~~~~gi~vevvPGiSs~~aaaa~~gl~~~~~~~~~~i~~----~~~~~~~~~i~~~~~~~~~  156 (251)
T d1vhva_          81 LVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSW----HRSQTPVNVIKANRSIDAH  156 (251)
T ss_dssp             EESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECS----SCCSHHHHHHHHHHHTTCB
T ss_pred             EecCCccccchHHHHHHHHHHcCCCcEEEecchHHHHHHHHhCCCccccceeEeeec----cCCCCchhhHHHHHhcCCC
Confidence            99999999999999988888899999999999999976 999999999888777643    2355678888888888889


Q ss_pred             eeeeecccCCccchHHHhhcccccCCeeeccHHHHHHHHHHhhhcCCCCCCCCeEEEEeccCCCCeEEEEeeccchhhcc
Q psy11146        160 TLCLLDIQVKEPTLESLTKKTRQYLPPRFMSVSQAAQQLVEITKTKPGLSTADLAVGIARVGSETQHIVATSLSNMTETD  239 (271)
Q Consensus       160 ~~~l~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~v~v~~~l~~~~E~i~~~~l~~l~~~~  239 (271)
                      ++++++...                  .+|.+.+..+.++..    .++++++++++++|+|+++|+++.++++++.+.+
T Consensus       157 Tlv~~~~~~------------------~~~~~~~~~~~ll~~----~~~~~d~~v~vv~~lg~~~E~i~~gtL~eL~~~~  214 (251)
T d1vhva_         157 TLLFLDLHP------------------EPMTIGHAVENLIAE----DAQMKDLYAVGIARAGSGEEVVKCDRLENLKKID  214 (251)
T ss_dssp             EEEEECCSS------------------SCCCHHHHHHHHHHH----CGGGGGSEEEEEESTTSSSCEEEEEEGGGGGGSC
T ss_pred             cEEEecccc------------------ccchHHHHHHHHHHH----cCCCCCCcEEEEEeCCCCCcEEEEEEHHHHHhhh
Confidence            998886542                  246777766655432    4677899999999999999999999999999888


Q ss_pred             CCCCceEEEEecc-CCcchHHHHHhhhccCC
Q psy11146        240 MGKPLHSLIIVGN-IHPVESEFLAQYSTQEL  269 (271)
Q Consensus       240 ~~~~~~sliivg~-~~~~~~~~l~~~~~~~~  269 (271)
                      ++.|++++||+|+ .+++|+|+|+||.-.|-
T Consensus       215 ~~~p~~~lIIvg~~l~~~E~e~L~~~~~~p~  245 (251)
T d1vhva_         215 FGKPLHVMVVLAKTLHFMEFECLREFADAPA  245 (251)
T ss_dssp             CCSSCEEEEECCSSCCHHHHHHHHHHSCCCG
T ss_pred             cCCCCeEEEEECCCCCHHHHHHHHHHhcCcH
Confidence            8888889999997 78899999999998874
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Back     information, alignment and structure
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure