Psyllid ID: psy111

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILFSV
Secondary Structure (PSIPRED)
cEEEccccccccccccccEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccc
Secondary Structure Prediction (SSPRO)
cEEEEcccccccccccccccccccccccccccccccHcccccccccccccccccHHHcccHHHHHHHHHHHHHccccHEEEEEcc
Coil and Loop (DISEMBL)
svvvndrwcntclckhggyltcedkynpgkfqsrkfencftldkyswgyrrdanidDILNMTEVLQTMMNTVSFGDKTLSILFSV
Flexible Loop (DISEMBL)
svvvndrwcntclckhggyltCEDKYNpgkfqsrkfencFTLDKYSWGYRRDANIDDILNMTEVLQTMMntvsfgdktlsilfsv
Low Complexity Region (SEG)
SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILFSV
Disordered region (IsUnstruct)
**VVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILF**
Disordered Region (DISOPRED)
SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILFSV
Disordered Region (DISEMBL)
SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILFSV
Disordered Region (DISPRO)
SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILFSV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILFSV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q6AYS4	459	Plasma alpha-L-fucosidase	yes	N/A	0.929	0.172	0.531	2e-21
Q9BTY2	467	Plasma alpha-L-fucosidase	yes	N/A	0.976	0.177	0.468	7e-21
Q99KR8	461	Plasma alpha-L-fucosidase	yes	N/A	0.929	0.171	0.518	8e-21
C3YWU0	449	Alpha-L-fucosidase OS=Bra	yes	N/A	0.929	0.175	0.518	4e-20
Q5RFI5	465	Plasma alpha-L-fucosidase	yes	N/A	0.976	0.178	0.457	2e-19
P04066	466	Tissue alpha-L-fucosidase	no	N/A	0.917	0.167	0.474	7e-19
P17164	462	Tissue alpha-L-fucosidase	no	N/A	0.917	0.168	0.474	1e-18
Q60HF8	468	Tissue alpha-L-fucosidase	N/A	N/A	0.917	0.166	0.474	1e-18
Q2KIM0	468	Tissue alpha-L-fucosidase	no	N/A	0.917	0.166	0.461	3e-17
Q99LJ1	452	Tissue alpha-L-fucosidase	no	N/A	0.917	0.172	0.435	7e-17

>sp|Q6AYS4|FUCO2_RAT Plasma alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca2 PE=2 SV=1

 Score =  100 bits (250), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/79 (53%), Positives = 55/79 (69%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRR+A I D L 
Sbjct: 248 TVVTNDRWGAGSICKHGGYYTCSDRYNPGHLLPHKWENCMTIDKFSWGYRREAEIGDYLT 307

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E+++ ++ TVS G   L
Sbjct: 308 IEELVKQLVETVSCGGNLL 326

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 1

>sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens GN=FUCA2 PE=1 SV=2

 Score = 99.0 bits (245), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 11/94 (11%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    +CKHGG+ TC D+YNPG     K+ENC T+DK SWGYRR+A I D L 
Sbjct: 256 TVVTNDRWGAGSICKHGGFYTCSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLT 315

Query: 61  MTEVLQTMMNTVSFG-----------DKTLSILF 83
           + E+++ ++ TVS G           D T+S++F
Sbjct: 316 IEELVKQLVETVSCGGNLLMNIGPTLDGTISVVF 349

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q99KR8|FUCO2_MOUSE Plasma alpha-L-fucosidase OS=Mus musculus GN=Fuca2 PE=2 SV=1

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 55/79 (69%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRR+A I D L 
Sbjct: 250 TVVTNDRWGVGSICKHGGYYTCSDRYNPGYLLPHKWENCMTIDKFSWGYRREAEISDYLT 309

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E+++ ++ TV+ G   L
Sbjct: 310 IEELVKKLVETVACGGNLL 328

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|C3YWU0|FUCO_BRAFL Alpha-L-fucosidase OS=Branchiostoma floridae GN=BRAFLDRAFT_56888 PE=3 SV=2

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 55/79 (69%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW +  LC HGGY TC D+YNPG  Q  K+ENC T+DK SWG+RR+A + D L+
Sbjct: 241 TVVTNDRWGSGMLCHHGGYYTCSDRYNPGVLQKHKWENCMTIDKKSWGFRREATLADYLD 300

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           M ++++ +  TVS G   L
Sbjct: 301 MDDLVKILAETVSCGGNLL 319

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Branchiostoma floridae (taxid: 7739)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q5RFI5|FUCO2_PONAB Plasma alpha-L-fucosidase OS=Pongo abelii GN=FUCA2 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 11/94 (11%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    + KHGG+ TC D+YNPG     K+ENC T+DK SWGYRR+A I D L 
Sbjct: 254 TVVTNDRWGAGSIYKHGGFYTCSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLT 313

Query: 61  MTEVLQTMMNTVSFG-----------DKTLSILF 83
           + E+++ ++ TVS G           D T+S++F
Sbjct: 314 IEELVKQLVETVSCGGNLLMNIGPTLDGTISVVF 347

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|P04066|FUCO_HUMAN Tissue alpha-L-fucosidase OS=Homo sapiens GN=FUCA1 PE=1 SV=4

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/78 (47%), Positives = 49/78 (62%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VVVNDRW   C C HGGY  CEDK+ P      K+E C ++DK+SWGYRRD  + D+   
Sbjct: 259 VVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEE 318

Query: 62  TEVLQTMMNTVSFGDKTL 79
           +E++  ++ TVS G   L
Sbjct: 319 SEIISELVQTVSLGGNYL 336

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|P17164|FUCO_RAT Tissue alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca1 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VVVNDRW   C C+HGGY  CEDKY P      K+E C ++DK SWGYRRD ++  I++ 
Sbjct: 255 VVVNDRWGQNCSCRHGGYYNCEDKYRPHSLPDHKWEMCTSVDKASWGYRRDMSMSTIVDE 314

Query: 62  TEVLQTMMNTVSFGDKTL 79
            E+++ ++ T+S G   L
Sbjct: 315 NEIIEELVQTISLGGNYL 332

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q60HF8|FUCO_MACFA Tissue alpha-L-fucosidase OS=Macaca fascicularis GN=FUCA1 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/78 (47%), Positives = 49/78 (62%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VVVNDRW   C C HGGY  CEDK+ P      K+E C ++DK+SWGYRRD  + D+   
Sbjct: 261 VVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMAMSDVTEE 320

Query: 62  TEVLQTMMNTVSFGDKTL 79
           +E++  ++ TVS G   L
Sbjct: 321 SEIISELVQTVSLGGNYL 338

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Macaca fascicularis (taxid: 9541)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q2KIM0|FUCO_BOVIN Tissue alpha-L-fucosidase OS=Bos taurus GN=FUCA1 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VVVNDRW   C C HGGY  C+DK+ P      K+E C ++D+ SWGYRRD  + DI N 
Sbjct: 262 VVVNDRWGQNCSCHHGGYYNCKDKFQPETLPDHKWEMCTSIDQRSWGYRRDMEMADITNE 321

Query: 62  TEVLQTMMNTVSFGDKTL 79
           + ++  ++ TVS G   L
Sbjct: 322 STIISELVQTVSLGGNYL 339

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q99LJ1|FUCO_MOUSE Tissue alpha-L-fucosidase OS=Mus musculus GN=Fuca1 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/78 (43%), Positives = 47/78 (60%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           V+VNDRW   C C HGGY  C+DKY P      K+E C ++D+ SWGYR+D  +  I   
Sbjct: 245 VIVNDRWGQNCSCHHGGYYNCQDKYKPQSLPDHKWEMCTSMDRASWGYRKDMTMSTIAKE 304

Query: 62  TEVLQTMMNTVSFGDKTL 79
            E+++ ++ TVS G   L
Sbjct: 305 NEIIEELVQTVSLGGNYL 322

Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
405960094	457	Plasma alpha-L-fucosidase [Crassostrea g	0.929	0.172	0.607	4e-24
405954796	453	Plasma alpha-L-fucosidase [Crassostrea g	0.929	0.174	0.582	4e-23
58332284	473	fucosidase, alpha-L- 2, plasma precursor	0.929	0.167	0.556	6e-22
198433730	481	PREDICTED: similar to fucosidase, alpha-	0.917	0.162	0.564	9e-22
198424065	461	PREDICTED: similar to Fucosidase, alpha-	0.929	0.171	0.594	1e-21
148236537	470	fucosidase, alpha-L- 2, plasma precursor	0.929	0.168	0.544	1e-21
351707099	464	Plasma alpha-L-fucosidase [Heterocephalu	0.929	0.170	0.531	2e-21
301753662	573	PREDICTED: plasma alpha-L-fucosidase-lik	0.976	0.144	0.489	3e-21
348559756	463	PREDICTED: plasma alpha-L-fucosidase-lik	0.929	0.170	0.518	6e-21
359318440	395	PREDICTED: plasma alpha-L-fucosidase [Ca	0.976	0.210	0.489	1e-20

>gi|405960094|gb|EKC26041.1| Plasma alpha-L-fucosidase [Crassostrea gigas]

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 63/79 (79%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           SVVVNDRW +   CKHGG+LTC+DK+NPGK Q RK+EN  TLD+ SWG+RRDA+ DD L+
Sbjct: 248 SVVVNDRWGSDATCKHGGFLTCQDKFNPGKLQKRKWENAMTLDRKSWGFRRDASFDDFLS 307

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           M E+L+T++ T+S+G   L
Sbjct: 308 MEELLETLLKTISYGGNIL 326

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|405954796|gb|EKC22136.1| Plasma alpha-L-fucosidase [Crassostrea gigas]

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/79 (58%), Positives = 63/79 (79%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VVVNDRW     CKHGG+L+C+D++NPGK Q RK+EN  TLD+YSWG+R DA+I D L+
Sbjct: 244 TVVVNDRWGYDSRCKHGGFLSCDDRFNPGKLQKRKWENAMTLDRYSWGFRHDASIADFLS 303

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           M E+L+T++NT+S+G   L
Sbjct: 304 MEELLETVLNTISYGGNIL 322

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|58332284|ref|NP_001011291.1| fucosidase, alpha-L- 2, plasma precursor [Xenopus (Silurana) tropicalis] gi|56789262|gb|AAH88008.1| hypothetical LOC496744 [Xenopus (Silurana) tropicalis]

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/79 (55%), Positives = 58/79 (73%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW N C+CKHGGY TC D+YNPG     K+ENC T+D+YSWGYRR+A I ++L 
Sbjct: 254 TVVTNDRWGNGCICKHGGYYTCTDRYNPGHLLKHKWENCMTIDRYSWGYRRNALISEMLT 313

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E++Q ++ TVS G   L
Sbjct: 314 IEEIVQELVETVSCGGNLL 332

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198433730|ref|XP_002131484.1| PREDICTED: similar to fucosidase, alpha-L- 2, plasma [Ciona intestinalis]

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 57/78 (73%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VV NDRW   C+CKHGGY TC+D+Y+PG  Q  K+ENC T+D+YSWGYRR+ANI D L +
Sbjct: 274 VVTNDRWGAGCMCKHGGYFTCQDRYSPGVLQHHKWENCMTIDRYSWGYRRNANIQDFLTI 333

Query: 62  TEVLQTMMNTVSFGDKTL 79
            E++ T  +T+S G   L
Sbjct: 334 EEIISTFASTISCGGNML 351

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198424065|ref|XP_002127716.1| PREDICTED: similar to Fucosidase, alpha-L- 2, plasma [Ciona intestinalis]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/79 (59%), Positives = 56/79 (70%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    +CKHGGY TC D+YNPGK Q RK+EN  TLDK SWGYRR+A + D L 
Sbjct: 252 TVVTNDRWGQGVMCKHGGYFTCSDRYNPGKLQPRKWENAMTLDKKSWGYRRNAELSDYLT 311

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E+LQT+  TVS G   L
Sbjct: 312 IEELLQTLATTVSCGGNLL 330

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148236537|ref|NP_001083206.1| fucosidase, alpha-L- 2, plasma precursor [Xenopus laevis] gi|37748585|gb|AAH59989.1| MGC68702 protein [Xenopus laevis]

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/79 (54%), Positives = 58/79 (73%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW N C+CKHGGY TC D+YNPG     K+ENC T+D+YSWGYRR+A I ++L 
Sbjct: 251 TVVTNDRWGNGCICKHGGYYTCSDRYNPGHLLKHKWENCMTIDRYSWGYRRNALISEMLT 310

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E+++ ++ TVS G   L
Sbjct: 311 IEEIVRVLVETVSCGGNLL 329

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351707099|gb|EHB10018.1| Plasma alpha-L-fucosidase [Heterocephalus glaber]

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/79 (53%), Positives = 58/79 (73%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW + C+CKHGGY TC D+Y+PG     K+ENC T+DK+SWGYRRDA I D L 
Sbjct: 253 TVVTNDRWGDRCICKHGGYYTCTDRYHPGHLLFHKWENCMTIDKFSWGYRRDAEITDYLT 312

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E+++ ++ TV++G   L
Sbjct: 313 IEELVKQLVETVAYGGNLL 331

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301753662|ref|XP_002912693.1| PREDICTED: plasma alpha-L-fucosidase-like [Ailuropoda melanoleuca]

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 11/94 (11%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRRDA I+D L 
Sbjct: 362 TVVTNDRWGYGTICKHGGYYTCSDRYNPGHLLPHKWENCMTIDKFSWGYRRDAGINDYLT 421

Query: 61  MTEVLQTMMNTVSFG-----------DKTLSILF 83
           + E+++ ++ TVS G           D T+S++F
Sbjct: 422 IEELVKQLVETVSCGGNLLMNIGPTHDGTISVIF 455

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348559756|ref|XP_003465681.1| PREDICTED: plasma alpha-L-fucosidase-like [Cavia porcellus]

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/79 (51%), Positives = 57/79 (72%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW + C+CKHGGY TC D++ PG     K+ENC T+DK+SWGYRRDA I D L 
Sbjct: 252 TVVTNDRWGDGCICKHGGYYTCADRFRPGHLLLHKWENCMTIDKFSWGYRRDAGITDYLT 311

Query: 61  MTEVLQTMMNTVSFGDKTL 79
           + E+++ ++ TV++G   L
Sbjct: 312 IEELVKQLVETVAYGGNLL 330

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|359318440|ref|XP_541133.4| PREDICTED: plasma alpha-L-fucosidase [Canis lupus familiaris]

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 11/94 (11%)

Query: 1   SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
           +VV NDRW    +CKHGGY TC D+Y+PG     K+ENC T+DK+SWGYRRDA IDD L 
Sbjct: 184 TVVTNDRWGYGTICKHGGYYTCSDRYDPGHLLPHKWENCMTIDKFSWGYRRDAGIDDYLT 243

Query: 61  MTEVLQTMMNTVSFG-----------DKTLSILF 83
           + E+++ ++ TVS G           D T+S++F
Sbjct: 244 IKELVKQLVETVSCGGNLLMNIGPTHDGTISVIF 277

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
UNIPROTKB|F1P8G4	397	FUCA2 "Uncharacterized protein	0.929	0.198	0.544	1.9e-21
RGD|1303053	459	Fuca2 "fucosidase, alpha-L- 2,	0.929	0.172	0.531	1.8e-20
UNIPROTKB|F1P4X3	463	FUCA1 "Uncharacterized protein	0.929	0.170	0.481	3.1e-20
UNIPROTKB|F1S715	467	FUCA2 "Uncharacterized protein	0.929	0.169	0.531	3.2e-20
UNIPROTKB|F1N5H2	468	FUCA2 "Uncharacterized protein	0.929	0.168	0.531	3.3e-20
MGI|MGI:1914098	461	Fuca2 "fucosidase, alpha-L- 2,	0.929	0.171	0.518	5.2e-20
UNIPROTKB|E1BS94	378	FUCA2 "Uncharacterized protein	0.929	0.208	0.506	5.6e-20
UNIPROTKB|Q9BTY2	467	FUCA2 "Plasma alpha-L-fucosida	0.929	0.169	0.518	1.2e-19
ZFIN|ZDB-GENE-030131-7434	451	fuca1 "fucosidase, alpha-L- 1,	0.917	0.172	0.474	3.6e-18
ZFIN|ZDB-GENE-040822-39	453	fuca2 "fucosidase, alpha-L- 2,	0.929	0.174	0.468	4.7e-18

UNIPROTKB|F1P8G4 FUCA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 253 (94.1 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 43/79 (54%), Positives = 56/79 (70%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGGY TC D+Y+PG     K+ENC T+DK+SWGYRRDA IDD L 
Sbjct:   186 TVVTNDRWGYGTICKHGGYYTCSDRYDPGHLLPHKWENCMTIDKFSWGYRRDAGIDDYLT 245

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + E+++ ++ TVS G   L
Sbjct:   246 IKELVKQLVETVSCGGNLL 264

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

RGD|1303053 Fuca2 "fucosidase, alpha-L- 2, plasma" [Rattus norvegicus (taxid:10116)]

 Score = 247 (92.0 bits), Expect = 1.8e-20, P = 1.8e-20
 Identities = 42/79 (53%), Positives = 55/79 (69%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRR+A I D L 
Sbjct:   248 TVVTNDRWGAGSICKHGGYYTCSDRYNPGHLLPHKWENCMTIDKFSWGYRREAEIGDYLT 307

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + E+++ ++ TVS G   L
Sbjct:   308 IEELVKQLVETVSCGGNLL 326

GO:0004560 "alpha-L-fucosidase activity" evidence=TAS

GO:0005576 "extracellular region" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006004 "fucose metabolic process" evidence=IEA

UNIPROTKB|F1P4X3 FUCA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 3.1e-20, P = 3.1e-20
 Identities = 38/79 (48%), Positives = 56/79 (70%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VVVNDRWCN C C HGG+  C DKY PG   + K+E C ++DK SWGYR + +ID++++
Sbjct:   255 TVVVNDRWCNNCSCHHGGFYNCADKYKPGTLLAHKWEMCSSIDKISWGYRSNMHIDELMD 314

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             +  +++ ++ TVSFG   L
Sbjct:   315 VASIIEELVQTVSFGGNYL 333

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

UNIPROTKB|F1S715 FUCA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 245 (91.3 bits), Expect = 3.2e-20, P = 3.2e-20
 Identities = 42/79 (53%), Positives = 55/79 (69%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRR+A I D L 
Sbjct:   256 TVVTNDRWGAGSICKHGGYYTCSDRYNPGYLLLHKWENCMTIDKFSWGYRRNAGISDYLT 315

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + E+++ ++ TVS G   L
Sbjct:   316 IEELVKQLVETVSCGGNLL 334

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

UNIPROTKB|F1N5H2 FUCA2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 3.3e-20, P = 3.3e-20
 Identities = 42/79 (53%), Positives = 55/79 (69%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRR+A I D L 
Sbjct:   257 TVVTNDRWGAGSICKHGGYYTCSDRYNPGHLLPHKWENCMTIDKFSWGYRRNAGIADYLT 316

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + E+++ ++ TVS G   L
Sbjct:   317 IEELVKQLVQTVSCGGNLL 335

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

MGI|MGI:1914098 Fuca2 "fucosidase, alpha-L- 2, plasma" [Mus musculus (taxid:10090)]

 Score = 243 (90.6 bits), Expect = 5.2e-20, P = 5.2e-20
 Identities = 41/79 (51%), Positives = 55/79 (69%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGGY TC D+YNPG     K+ENC T+DK+SWGYRR+A I D L 
Sbjct:   250 TVVTNDRWGVGSICKHGGYYTCSDRYNPGYLLPHKWENCMTIDKFSWGYRREAEISDYLT 309

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + E+++ ++ TV+ G   L
Sbjct:   310 IEELVKKLVETVACGGNLL 328

GO:0003824 "catalytic activity" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA

UNIPROTKB|E1BS94 FUCA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 239 (89.2 bits), Expect = 5.6e-20, P = 5.6e-20
 Identities = 40/79 (50%), Positives = 56/79 (70%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGG+ TC D+YNPG     K+ENC T+DK SWGYRR+AN++D L 
Sbjct:   167 TVVTNDRWGAGGICKHGGFYTCSDRYNPGHLLPHKWENCMTIDKRSWGYRRNANLEDYLT 226

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + ++++ ++ TVS G   L
Sbjct:   227 VEDLVKQLVETVSCGGNLL 245

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

UNIPROTKB|Q9BTY2 FUCA2 "Plasma alpha-L-fucosidase" [Homo sapiens (taxid:9606)]

 Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 41/79 (51%), Positives = 54/79 (68%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +CKHGG+ TC D+YNPG     K+ENC T+DK SWGYRR+A I D L 
Sbjct:   256 TVVTNDRWGAGSICKHGGFYTCSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLT 315

Query:    61 MTEVLQTMMNTVSFGDKTL 79
             + E+++ ++ TVS G   L
Sbjct:   316 IEELVKQLVETVSCGGNLL 334

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

ZFIN|ZDB-GENE-030131-7434 fuca1 "fucosidase, alpha-L- 1, tissue" [Danio rerio (taxid:7955)]

 Score = 226 (84.6 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 37/78 (47%), Positives = 54/78 (69%)

Query:     2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
             VVVNDRW N C CKHGGY  C DK+NP K  + K+E C ++DK SWGYRR+  + +++++
Sbjct:   247 VVVNDRWGNGCYCKHGGYYNCADKFNPQKLLNHKWEKCQSVDKISWGYRRNMKLSELMDL 306

Query:    62 TEVLQTMMNTVSFGDKTL 79
              E++Q ++  V+ G   L
Sbjct:   307 PELVQDLVYIVALGGNYL 324

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

ZFIN|ZDB-GENE-040822-39 fuca2 "fucosidase, alpha-L- 2, plasma" [Danio rerio (taxid:7955)]

 Score = 225 (84.3 bits), Expect = 4.7e-18, P = 4.7e-18
 Identities = 37/79 (46%), Positives = 53/79 (67%)

Query:     1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             +VV NDRW    +C HGGY TC D+YNPG     K+ENC ++D+ SWGYRR+A + D L+
Sbjct:   243 TVVTNDRWGYGSICNHGGYYTCTDRYNPGHLVKHKWENCLSIDQRSWGYRREAKLSDYLS 302

Query:    61 MTEVLQTMMNTVSFGDKTL 79
               +++ +++ TVS G   L
Sbjct:   303 TEQLIASLVETVSCGGNLL 321

GO:0003824 "catalytic activity" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006004 "fucose metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q99KR8	FUCO2_MOUSE	3, ., 2, ., 1, ., 5, 1	0.5189	0.9294	0.1713	yes	N/A
Q6AYS4	FUCO2_RAT	3, ., 2, ., 1, ., 5, 1	0.5316	0.9294	0.1721	yes	N/A
C3YWU0	FUCO_BRAFL	3, ., 2, ., 1, ., 5, 1	0.5189	0.9294	0.1759	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	85
smart00812	384	smart00812, Alpha_L_fucos, Alpha-L-fucosidase	7e-21
pfam01120	320	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase	1e-13

>gnl|CDD|214829 smart00812, Alpha_L_fucos, Alpha-L-fucosidase

 Score = 83.9 bits (208), Expect = 7e-21
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VVVNDRW     CKHGG+ T E++  PGK     +E C T+   SWGYRR+ ++ D  + 
Sbjct: 229 VVVNDRWGG-TGCKHGGFYTDEERGAPGKLLPHPWETCTTIG-KSWGYRRNESLSDYKSP 286

Query: 62  TEVLQTMMNTVSFG 75
            E+++ +++ VS G
Sbjct: 287 KELIRDLVDIVSKG 300

O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. Length = 384

>gnl|CDD|216307 pfam01120, Alpha_L_fucos, Alpha-L-fucosidase

 Score = 63.4 bits (155), Expect = 1e-13
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
           VVVNDRW        GG     ++  PG+     +E C T+   SWGYRR     D  + 
Sbjct: 211 VVVNDRWGYGP--YGGGDYETPERGLPGELLDHPWETCMTIG-GSWGYRRLVTDSDYKSP 267

Query: 62  TEVLQTMMNTVSFG 75
            E+++ +++ VS G
Sbjct: 268 KEIIRMLVDAVSKG 281

Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
KOG3340|consensus	454		99.97
smart00812	384	Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro	99.92
PF01120	346	Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00	99.82
COG3669	430	Alpha-L-fucosidase [Carbohydrate transport and met	98.69

>KOG3340|consensus

Probab=99.97  E-value=2e-32  Score=206.57  Aligned_cols=84  Identities=49%  Similarity=0.949  Sum_probs=82.2

Q ss_pred             CEEEcCCCCCCCCcccCCccCCCCcCCCCCCCCCCccccccCCCCCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEEE
Q psy111            1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLS   80 (85)
Q Consensus         1 ~vvvNdR~g~~~~~~~gdy~t~e~~~~p~~~~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlLL   80 (85)
                      +||+|||||.++.|+||+|+||+|++.|+...+++||+|+||+++||||+|++...++.++.|||+.|+++||+||||||
T Consensus       245 ~VV~NDRWG~gt~c~HGgfy~csD~~~Pg~L~~hKWEnc~tlDk~SWG~Rrd~~~Sd~~t~~Eii~qlv~Tvsc~GN~Ll  324 (454)
T KOG3340|consen  245 TVVVNDRWGTGTMCKHGGFYTCSDRYNPGKLLEHKWENCMTLDKHSWGYRRDMKLSDVNTAYEIIKQLVRTVSCNGNLLL  324 (454)
T ss_pred             eEEecccccCCcccccCCeeeccccCCCcccchhhhhhceeeeccccchhcccchhhhhhHHHHHHHHHHhEeeCCeEEE
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccC
Q psy111           81 ILFS   84 (85)
Q Consensus        81 NIG~   84 (85)
                      |||-
T Consensus       325 NvGP  328 (454)
T KOG3340|consen  325 NVGP  328 (454)
T ss_pred             eecC
Confidence            9994

>smart00812 Alpha_L_fucos Alpha-L-fucosidase

Probab=99.92  E-value=1.2e-25  Score=171.24  Aligned_cols=81  Identities=40%  Similarity=0.712  Sum_probs=71.2

Q ss_pred             CEEEcCCCCCCCCcccCCccCCCCcCCCCCCCCCCccccccCCCCCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEEE
Q psy111            1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLS   80 (85)
Q Consensus         1 ~vvvNdR~g~~~~~~~gdy~t~e~~~~p~~~~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlLL   80 (85)
                      +||||+||+ .....+|+|.+++++..|......|||+|+||+ .||||++++.+++|||+++||++|+++|||||||||
T Consensus       228 ~vvvn~R~~-~~~~~~g~~~~~~e~~~p~~~~~~pwE~~~ti~-~sWgy~~~~~~~~~ks~~~li~~l~~~Vsk~GnlLL  305 (384)
T smart00812      228 TVVVNDRWG-GTGCKHGGFYTDEERGAPGKLLPHPWETCTTIG-KSWGYRRNESDSDYKSPKELIRDLVDIVSKGGNLLL  305 (384)
T ss_pred             eEEEEcccc-ccCCCCCCcccCcccCCCCCCCCCCcccccccC-CCCCcCCCCCcccCCCHHHHHHHHhhhcCCCceEEE
Confidence            479999997 223347888877777888888899999999999 899999987667899999999999999999999999


Q ss_pred             ecc
Q psy111           81 ILF   83 (85)
Q Consensus        81 NIG   83 (85)
                      |||
T Consensus       306 NVg  308 (384)
T smart00812      306 NVG  308 (384)
T ss_pred             ccC
Confidence            998

O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.

>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3

Probab=99.82  E-value=3.3e-21  Score=144.49  Aligned_cols=78  Identities=29%  Similarity=0.528  Sum_probs=62.3

Q ss_pred             CEEEcCCCCCCCCcccCCccCCCCcCCCCCCCCCCccccccCCCCCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEEE
Q psy111            1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLS   80 (85)
Q Consensus         1 ~vvvNdR~g~~~~~~~gdy~t~e~~~~p~~~~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlLL   80 (85)
                      +||||+|++... ....||.|+|+ ..|......|||+|+||+ .+|||  ...+..+||+++||++|+++|||||||||
T Consensus       238 ~~ii~~r~~~~~-~~~~d~~~~E~-~~~~~~~~~pwE~~~ti~-~~W~y--~~~~~~~ks~~~li~~l~~~vs~ngnlLL  312 (346)
T PF01120_consen  238 DVIINNRWGGNE-QGDGDYNTPER-GIPGEIQGRPWETCTTIG-PSWGY--NTPDEKYKSADELIDILVDSVSRNGNLLL  312 (346)
T ss_dssp             TSEEECCCSSCS-SCCBSCCEECT-TBTTTEEESEEEEEEESS-SSSS---CGGGCGS--HHHHHHHHHHHHTBTEEEEE
T ss_pred             eEEEecccCCCC-Cccccccchhc-cCCCCCCCCCccccCcCC-CCCcc--cCCCCCcCCHHHHHHHHHHHhccCceEEE
Confidence            489999998762 11229999986 567778899999999997 89999  22345899999999999999999999999


Q ss_pred             ecc
Q psy111           81 ILF   83 (85)
Q Consensus        81 NIG   83 (85)
                      |||
T Consensus       313 Nig  315 (346)
T PF01120_consen  313 NIG  315 (346)
T ss_dssp             EE-
T ss_pred             ecC
Confidence            998

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....

>COG3669 Alpha-L-fucosidase [Carbohydrate transport and metabolism]

Probab=98.69  E-value=2.5e-08  Score=77.21  Aligned_cols=49  Identities=14%  Similarity=0.082  Sum_probs=38.9

Q ss_pred             CCCCCccccccCCC---CCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEEEecc
Q psy111           31 FQSRKFENCFTLDK---YSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILF   83 (85)
Q Consensus        31 ~~~~pWE~c~ti~~---~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlLLNIG   83 (85)
                      ..+.+|.+|...++   ..|+|.    +.+|||.+||+..|+++|||||+|||||+
T Consensus       239 ~g~n~~~~~~~~~p~h~~~~~~~----d~~~Ks~~elv~~l~dvVskgg~llLnIp  290 (430)
T COG3669         239 HGDNSWTIFTCGGPDHSLRPGHE----DQDYKSVEELVSILFDVVSKGGPLLLNIP  290 (430)
T ss_pred             cccCCCcceeccCCccccccccc----ccccccHHHHhhhhhhhhccCCceEeccC
Confidence            34578998876652   234443    35799999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	85
2wvv_A	450	Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly	1e-13
2zxd_A	455	Alpha-L-fucosidase, putative; TIM barrel, hydrolas	2e-08
3eyp_A	469	Putative alpha-L-fucosidase; structural genomics,	4e-04

>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Length = 450

 Score = 63.3 bits (154), Expect = 1e-13
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 2   VVVNDRW---------CNTCLCKHGGYLTCEDKYNPGKFQSRKF-----ENCFTLDKYSW 47
           V +N R           ++     G Y +  ++  P   +  K      E C T+ +  W
Sbjct: 223 VAINSRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKDLKVTQWDWEACMTIPENQW 282

Query: 48  GYRRDANIDDILNMTEVLQTMMNTVSFG 75
           GY +D ++  +    EV+  +++ VS G
Sbjct: 283 GYHKDWSLSYVKTPIEVIDRIVHAVSMG 310

>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Length = 455

 Score = 48.1 bits (114), Expect = 2e-08
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYN-PGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             VNDRW       H  + T E   N PG     K+E    +   S+GY R+   + +L+
Sbjct: 249 GSVNDRWGV----PHWDFKTAEYHVNYPGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLS 303

Query: 61  MTEVLQTMMNTVSFG 75
           + +++ T+++ VS G
Sbjct: 304 VEQLVYTLVDVVSKG 318

>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Length = 469

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 18/87 (20%)

Query: 5   NDRWCNTCLCKHG----------------GYLTCEDKYNPGKFQSRKFENCFTLDKYSWG 48
           + RW      + G                 Y    ++           E   ++   SW 
Sbjct: 205 DVRWMGNEAGEAGDPCWATTDSVAIRDEAQYYKGLNEGMLDGDAYIPAETDVSIRP-SWF 263

Query: 49  YRRDANIDDILNMTEVLQTMMNTVSFG 75
           Y  + +   + ++ E+      +V   
Sbjct: 264 YHAEED-SRVKSVRELWDIYCTSVGRN 289

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
2zxd_A	455	Alpha-L-fucosidase, putative; TIM barrel, hydrolas	99.9
2wvv_A	450	Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly	99.88
3eyp_A	469	Putative alpha-L-fucosidase; structural genomics,	99.77
3gza_A	443	Putative alpha-L-fucosidase; NP_812709.1, structur	99.74
3ues_A	478	Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr	99.72

>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*

Probab=99.90  E-value=6.3e-25  Score=168.98  Aligned_cols=79  Identities=29%  Similarity=0.464  Sum_probs=71.7

Q ss_pred             CEEEcCCCCCCCCcccCCccCCCCcCC-CCCCCCCCccccccCCCCCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEE
Q psy111            1 SVVVNDRWCNTCLCKHGGYLTCEDKYN-PGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTL   79 (85)
Q Consensus         1 ~vvvNdR~g~~~~~~~gdy~t~e~~~~-p~~~~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlL   79 (85)
                      +||||+|||..    +|||.|+|+... |+.+...|||+|+||+ .||||++++.+.+|||+++||++|+++||||||||
T Consensus       248 ~~vvn~R~g~~----~gd~~t~e~~~~~~~~~~~~~WE~~~ti~-~sWgY~~~~~~~~~ks~~~Li~~lv~~VskgGnlL  322 (455)
T 2zxd_A          248 EGSVNDRWGVP----HWDFKTAEYHVNYPGDLPGYKWEFTRGIG-LSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLL  322 (455)
T ss_dssp             TCCBCSCSSSS----CCSSEEEBTTBBCCSSCCSSCEEEEEESS-SCSSCCTTCCGGGSCCHHHHHHHHHHHHHTTEEEE
T ss_pred             CEEEEcccCCC----cccccccccccCCcCcCCCCCceeeeeEC-CCCCcCCCCCccCcCCHHHHHHHHHHHHhcCCeEE
Confidence            47899999854    899999998765 8788899999999999 89999998766789999999999999999999999


Q ss_pred             EeccC
Q psy111           80 SILFS   84 (85)
Q Consensus        80 LNIG~   84 (85)
                      ||||-
T Consensus       323 LNvgP  327 (455)
T 2zxd_A          323 LNVGP  327 (455)
T ss_dssp             EEECC
T ss_pred             EEeCC
Confidence            99983

>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*

Probab=99.88  E-value=2.1e-23  Score=160.14  Aligned_cols=82  Identities=23%  Similarity=0.407  Sum_probs=68.5

Q ss_pred             CEEEcCCCCCCC---------CcccCCccC-CCCcCCCCCC-----CCCCccccccCCCCCcccccCCCCCCCCCHHHHH
Q psy111            1 SVVVNDRWCNTC---------LCKHGGYLT-CEDKYNPGKF-----QSRKFENCFTLDKYSWGYRRDANIDDILNMTEVL   65 (85)
Q Consensus         1 ~vvvNdR~g~~~---------~~~~gdy~t-~e~~~~p~~~-----~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li   65 (85)
                      +||||+||+.+.         .+.+|||.| +|+ ..|...     ...|||+|+||++.||||++++....|||+++||
T Consensus       222 ~~vv~~r~~~~~~g~~~~~~~~~~~gD~~t~~e~-~~p~~~~~~~~~~~pwE~~~ti~~~sWgY~~~~~~~~~ks~~~Li  300 (450)
T 2wvv_A          222 GVAINSRLRADDKGKRHFDSNGRLMGDYESGYER-RLPDPVKDLKVTQWDWEACMTIPENQWGYHKDWSLSYVKTPIEVI  300 (450)
T ss_dssp             TCEEBGGGCBCTTSCBSBCTTSCBCSSBBCCCBS-CCCCTTTCGGGGGSCBEEEECSBSSCCSCCSCGGGSCBCCHHHHH
T ss_pred             cEEEEcccCCCccccccccccccccCCccccccc-cCCccccccCCCcccceeeeeeCCCCccccCCCCccccCCHHHHH
Confidence            489999998652         245789999 776 466532     3579999999996699999876546899999999


Q ss_pred             HHHHHhhcCCCcEEEecc
Q psy111           66 QTMMNTVSFGDKTLSILF   83 (85)
Q Consensus        66 ~~Lv~~vskgGNlLLNIG   83 (85)
                      ++|+++||||||||||||
T Consensus       301 ~~lv~~VskgGnlLLNvg  318 (450)
T 2wvv_A          301 DRIVHAVSMGGNMVVNFG  318 (450)
T ss_dssp             HHHHHHHHTTCEEEEEEC
T ss_pred             HHHHHHhcCCceEEEeeC
Confidence            999999999999999998

>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}

Probab=99.77  E-value=1.6e-19  Score=139.36  Aligned_cols=77  Identities=13%  Similarity=0.087  Sum_probs=58.4

Q ss_pred             cCCCCCCCCcccCC----ccCCCC------------cCCCCCCCCCCccccccCCCCCcccccCCCCCCCCCHHHHHHHH
Q psy111            5 NDRWCNTCLCKHGG----YLTCED------------KYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTM   68 (85)
Q Consensus         5 NdR~g~~~~~~~gd----y~t~e~------------~~~p~~~~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~L   68 (85)
                      |.||+.++.+..|+    +.|++.            +..+......|||+|+||+ .||||+++ .+..|||+++||++|
T Consensus       205 ~~Rw~g~e~g~~~~~~w~~~~~~~~~~~~~~~~~~~~G~~~~~~~~pwE~~~ti~-~~W~y~~~-~~~~~ks~~~li~~l  282 (469)
T 3eyp_A          205 DVRWMGNEAGEAGDPCWATTDSVAIRDEAQYYKGLNEGMLDGDAYIPAETDVSIR-PSWFYHAE-EDSRVKSVRELWDIY  282 (469)
T ss_dssp             SBBCCSCSSSCCCSSCCSEECHHHHHTGGGCHHHHHTCCTTCSEECCBEEEEESS-SSSSCCGG-GGGGCCCHHHHHHHH
T ss_pred             ccccccccccccCCcccceecccccccCcccccccccCCcCCCCCCccceeeccC-CccCcCcC-CcCCcCCHHHHHHHH
Confidence            77886665555553    344431            1122233458999999998 89999986 346899999999999


Q ss_pred             HHhhcCCCcEEEecc
Q psy111           69 MNTVSFGDKTLSILF   83 (85)
Q Consensus        69 v~~vskgGNlLLNIG   83 (85)
                      +++||||||||||||
T Consensus       283 ~~~Vs~~gnlLLNvg  297 (469)
T 3eyp_A          283 CTSVGRNSVLLLNFP  297 (469)
T ss_dssp             HTTTTBTSEEEEECC
T ss_pred             HHHhcCCCcEEEccC
Confidence            999999999999998

>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.74  E-value=8.2e-19  Score=134.88  Aligned_cols=50  Identities=12%  Similarity=0.113  Sum_probs=44.7

Q ss_pred             CCCccccccCCC----CCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEEEecc
Q psy111           33 SRKFENCFTLDK----YSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILF   83 (85)
Q Consensus        33 ~~pWE~c~ti~~----~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlLLNIG   83 (85)
                      -.|||+|+||++    +||||++++. .+|||+++||++|+++||||||||||||
T Consensus       265 w~p~E~d~ti~~~n~~~sW~y~~~~~-~~~ks~~~Li~~l~~sV~~ngnLLLNVg  318 (443)
T 3gza_A          265 WVPAMADTPLRGANGRHEWFWEPDDE-NNIYPLNTLMDKYEKSVGRNATLILGLT  318 (443)
T ss_dssp             ECCEEEEEESBCCTTCCBSSCCTTCG-GGSCCHHHHHHHHHTTTTBTCEEEEEEC
T ss_pred             cccceeeccccCCCCCCccCCccCCc-ccCCCHHHHHHHHHHHhcCCceEEEecC
Confidence            378999999994    3999998653 5699999999999999999999999998

>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*

Probab=99.72  E-value=2.7e-18  Score=132.94  Aligned_cols=48  Identities=13%  Similarity=0.171  Sum_probs=44.3

Q ss_pred             CCccccccCCCCCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEEEecc
Q psy111           34 RKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTLSILF   83 (85)
Q Consensus        34 ~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlLLNIG   83 (85)
                      .|||+|+||+ .+|||++.+ +..|||+++||++|+++||||||||||||
T Consensus       278 ~P~E~~~ti~-~~W~y~~~~-d~~~ks~~~li~~l~~~V~~ngnlLLNvg  325 (478)
T 3ues_A          278 YPAEVDTSIR-PGWFYHQSE-DDKVMSADQLFDLWLSAVGGNSSLLLNIP  325 (478)
T ss_dssp             CCEEEEEESS-SSSSCCGGG-TTCCCCHHHHHHHHHHHHTBTEEEEEECC
T ss_pred             CccccccccC-CCCCCCcCC-CCCcCCHHHHHHHHHHHhccCceEEECCC
Confidence            6889999999 899999853 45799999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	85
d1hl9a2	350	c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, ca	3e-08

>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 350

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Putative alpha-L-fucosidase, catalytic domain
domain: Putative alpha-L-fucosidase, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 46.7 bits (110), Expect = 3e-08
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 2   VVVNDRWCNTCLCKHGGYLTCEDKYN-PGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
             VNDRW       H  + T E   N PG     K+E    +   S+GY R+   + +L+
Sbjct: 243 GSVNDRWG----VPHWDFKTAEYHVNYPGDLPGYKWEFTRGIGL-SFGYNRNEGPEHMLS 297

Query: 61  MTEVLQTMMNTVSFG 75
           + +++ T+++ VS G
Sbjct: 298 VEQLVYTLVDVVSKG 312

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	85
d1hl9a2	350	Putative alpha-L-fucosidase, catalytic domain {The	99.86

>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Putative alpha-L-fucosidase, catalytic domain
domain: Putative alpha-L-fucosidase, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=4.6e-23  Score=151.88  Aligned_cols=78  Identities=28%  Similarity=0.445  Sum_probs=60.9

Q ss_pred             CEEEcCCCCCCCCcccCCccCCCCc-CCCCCCCCCCccccccCCCCCcccccCCCCCCCCCHHHHHHHHHHhhcCCCcEE
Q psy111            1 SVVVNDRWCNTCLCKHGGYLTCEDK-YNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNMTEVLQTMMNTVSFGDKTL   79 (85)
Q Consensus         1 ~vvvNdR~g~~~~~~~gdy~t~e~~-~~p~~~~~~pWE~c~ti~~~sWGY~~~~~~~~~ks~~~li~~Lv~~vskgGNlL   79 (85)
                      +++||+||+.+    .+||.++++. ..|+.+...|||+|+||+ .||||++++.+.+|||+++||++|+++||||||||
T Consensus       242 ~~~i~~r~~~~----~~~~~~~~~~~~~p~~~~~~~WE~~~ti~-~~Wgy~~~d~~~~~ks~~~li~~l~~~VskggnlL  316 (350)
T d1hl9a2         242 EGSVNDRWGVP----HWDFKTAEYHVNYPGDLPGYKWEFTRGIG-LSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGNLL  316 (350)
T ss_dssp             TCCBCSCSSSS----CCSSEEEC--------CCSSCEEEEEESS-SCSSCCSCC----CCCHHHHHHHHHHHHHTTEEEE
T ss_pred             CCcccceeccC----CCCCcccccccCCCCCcccccceeeeecc-CCCCCCCCCCccccCCHHHHHHHHHHHhcCCceEE
Confidence            47899999876    5666666542 357778899999999999 89999998877889999999999999999999999


Q ss_pred             Eecc
Q psy111           80 SILF   83 (85)
Q Consensus        80 LNIG   83 (85)
                      ||||
T Consensus       317 LNVg  320 (350)
T d1hl9a2         317 LNVG  320 (350)
T ss_dssp             EEEC
T ss_pred             EeeC
Confidence            9998