Psyllid ID: psy11215

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MNISIEIPEVFVKRKSWKASLRKNSFITPPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTNS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHccHHHHHEEEEEcccc
Coil and Loop (DISEMBL)
mnisieipEVFVKRKSWKaslrknsfitppkdtnipedirdeidcvvgqtklltsdkFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTNS
Flexible Loop (DISEMBL)
mnisieipevfvkrkswkaslrknsfitppkdtnipediRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTNS
Low Complexity Region (SEG)
MNISIEIPEVFVKRKSWKASLRKNSFITPPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTNS
Disordered region (IsUnstruct)
******IPEVFVKRKSWKASL****FI*********EDIRDEIDCVVGQTKLLTSDKF********************ILENDLDSFWDMIYIQLYT***
Disordered Region (DISOPRED)
***SIEIPEVFVKRKSWKASLR**************EDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTT**
Disordered Region (DISEMBL)
MNISIEIPEVFVKRKSWKASLRKNSFITPPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTNS
Disordered Region (DISPRO)
****IEIPEVFVKRKSWKASLRKNSFITPPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNISIEIPEVFVKRKSWKASLRKNSFITPPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLYTTNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q9D415	992	Disks large-associated pr	yes	N/A	0.63	0.063	0.384	1e-06
O14490	977	Disks large-associated pr	yes	N/A	0.63	0.064	0.384	2e-06
Q15398	846	Disks large-associated pr	no	N/A	0.6	0.070	0.387	3e-06
P97836	992	Disks large-associated pr	no	N/A	0.63	0.063	0.384	9e-06
Q7ZYZ6	999	Disks large-associated pr	no	N/A	0.63	0.063	0.369	2e-05
Q9Y2H0	992	Disks large-associated pr	no	N/A	0.63	0.063	0.353	0.0001
B1AZP2	992	Disks large-associated pr	no	N/A	0.63	0.063	0.353	0.0001
Q7K3L1	921	Guanylate kinase-associat	yes	N/A	0.53	0.057	0.369	0.0001
P97839	992	Disks large-associated pr	no	N/A	0.63	0.063	0.338	0.0002
Q8K4R9	808	Disks large-associated pr	no	N/A	0.66	0.081	0.338	0.0003

>sp|Q9D415|DLGP1_MOUSE Disks large-associated protein 1 OS=Mus musculus GN=Dlgap1 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct: 834 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 891

Query: 91  IYIQL 95
           + + +
Sbjct: 892 LQLSI 896

Part of the postsynaptic scaffold in neuronal cells.
Mus musculus (taxid: 10090)

>sp|O14490|DLGP1_HUMAN Disks large-associated protein 1 OS=Homo sapiens GN=DLGAP1 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct: 819 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 876

Query: 91  IYIQL 95
           + + +
Sbjct: 877 LQLSI 881

Part of the postsynaptic scaffold in neuronal cells.

Homo sapiens (taxid: 9606)

>sp|Q15398|DLGP5_HUMAN Disks large-associated protein 5 OS=Homo sapiens GN=DLGAP5 PE=1 SV=2

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 34  NIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYI 93
           +IP+D +D I   VGQT+LL  ++F+Q   L+D  E +  +        DLD FWDM+  
Sbjct: 458 DIPDDAKDLIRTAVGQTRLLMKERFKQFEGLVDDCEYK--RGIKETTCTDLDGFWDMVSF 515

Query: 94  QL 95
           Q+
Sbjct: 516 QI 517

Potential cell cycle regulator that may play a role in carcinogenesis of cancer cells. Mitotic phosphoprotein regulated by the ubiquitin-proteasome pathway. Key regulator of adherens junction integrity and differentiation that may be involved in CDH1-mediated adhesion and signaling in epithelial cells.

Homo sapiens (taxid: 9606)

>sp|P97836|DLGP1_RAT Disks large-associated protein 1 OS=Rattus norvegicus GN=Dlgap1 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct: 834 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 891

Query: 91  IYIQL 95
           + + +
Sbjct: 892 LQLSI 896

Part of the postsynaptic scaffold in neuronal cells.

Rattus norvegicus (taxid: 10116)

>sp|Q7ZYZ6|DLGP1_DANRE Disks large-associated protein 1 OS=Danio rerio GN=dlgap1 PE=3 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           K+  +P+++  +I   VG  +LL S KFQQ   L +  EN +  A PR +  DL  FWDM
Sbjct: 839 KENKMPDEVLGKIRGAVGSAQLLMSQKFQQFRELCE--ENLNPNAHPRPVAQDLAGFWDM 896

Query: 91  IYIQL 95
           + + +
Sbjct: 897 LQLSI 901

Part of the postsynaptic scaffold in neuronal cells.

Danio rerio (taxid: 7955)

>sp|Q9Y2H0|DLGP4_HUMAN Disks large-associated protein 4 OS=Homo sapiens GN=DLGAP4 PE=1 SV=3

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           K+ N+ E++  ++   VG  +LL S KFQQ   L +Q  N +  A PR    DL  FWD+
Sbjct: 830 KENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQ--NLNPDANPRPTAQDLAGFWDL 887

Query: 91  IYIQL 95
           + + +
Sbjct: 888 LQLSI 892

May play a role in the molecular organization of synapses and neuronal cell signaling. Could be an adapter protein linking ion channel to the subsynaptic cytoskeleton. May induce enrichment of PSD-95/SAP90 at the plasma membrane.

Homo sapiens (taxid: 9606)

>sp|B1AZP2|DLGP4_MOUSE Disks large-associated protein 4 OS=Mus musculus GN=Dlgap4 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           K+ N+ E++  ++   VG  +LL S KFQQ   L +Q  N +  A PR    DL  FWD+
Sbjct: 830 KENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQ--NLNPDANPRPTAQDLAGFWDL 887

Query: 91  IYIQL 95
           + + +
Sbjct: 888 LQLSI 892

May play a role in the molecular organization of synapses and neuronal cell signaling. Could be an adapter protein linking ion channel to the subsynaptic cytoskeleton. May induce enrichment of PSD-95/SAP90 at the plasma membrane.

Mus musculus (taxid: 10090)

>sp|Q7K3L1|MARS_DROME Guanylate kinase-associated protein mars OS=Drosophila melanogaster GN=mars PE=1 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 12/65 (18%)

Query: 41  DEIDCVVGQTKLLTSDKFQQMSNLIDQYE-----------NQSEQAQPRILENDLDSFWD 89
           D I+  +GQT+LLT+ K  Q S LID+ E           + SE ++P +   DL+ +WD
Sbjct: 612 DMINVTIGQTRLLTTKKMMQFSGLIDRCEAGATGKNSQPNDGSEDSKP-VQAEDLEGWWD 670

Query: 90  MIYIQ 94
           M+ +Q
Sbjct: 671 MLRLQ 675

Cell cycle regulator.

Drosophila melanogaster (taxid: 7227)

>sp|P97839|DLGP4_RAT Disks large-associated protein 4 OS=Rattus norvegicus GN=Dlgap4 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           K+ N+ E++  ++   VG  +LL S KFQQ   + +Q  N +  A PR    DL  FWD+
Sbjct: 830 KENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGICEQ--NLNPDANPRPTAQDLAGFWDL 887

Query: 91  IYIQL 95
           + + +
Sbjct: 888 LQLSI 892

May play a role in the molecular organization of synapses and neuronal cell signaling. Could be an adapter protein linking ion channel to the subsynaptic cytoskeleton. May induce enrichment of PSD-95/SAP90 at the plasma membrane.

Rattus norvegicus (taxid: 10116)

>sp|Q8K4R9|DLGP5_MOUSE Disks large-associated protein 5 OS=Mus musculus GN=Dlgap5 PE=1 SV=2

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 32  DTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMI 91
           D +I ++ +  I   VGQT+LL  ++F+Q   L+D  E +  + +      DLD FWDM+
Sbjct: 440 DLDISDEAKGLIRTTVGQTRLLIKERFRQFEGLVDNCEYKRGEKETTC--TDLDGFWDMV 497

Query: 92  YIQLYTTN 99
             Q+   N
Sbjct: 498 SFQVDDVN 505

Potential cell cycle regulator that may play a role in carcinogenesis of cancer cells. Mitotic phosphoprotein regulated by the ubiquitin-proteasome pathway. Key regulator of adherens junction integrity and differentiation that may be involved in CDH1-mediated adhesion and signaling in epithelial cells.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
328704153	544	PREDICTED: hypothetical protein LOC10016	0.63	0.115	0.507	1e-11
242003456	113	hepatoma up-regulated protein, putative	0.62	0.548	0.468	1e-07
148233670	532	uncharacterized protein LOC735156 [Xenop	0.64	0.120	0.409	2e-06
198428694	512	PREDICTED: similar to discs, large (Dros	0.59	0.115	0.460	3e-06
52354687	608	LOC494809 protein, partial [Xenopus laev	0.62	0.101	0.406	3e-06
345309690	612	PREDICTED: disks large-associated protei	0.6	0.098	0.403	4e-06
449504583	891	PREDICTED: disks large-associated protei	0.64	0.071	0.409	5e-06
196008195	834	hypothetical protein TRIADDRAFT_57926 [T	0.61	0.073	0.412	5e-06
321461462	565	hypothetical protein DAPPUDRAFT_227521 [	0.59	0.104	0.360	5e-06
426233418	844	PREDICTED: disks large-associated protei	0.66	0.078	0.382	6e-06

>gi|328704153|ref|XP_001946138.2| PREDICTED: hypothetical protein LOC100160802 [Acyrthosiphon pisum]

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           K + +P+ ++DEID   GQTKLLT+DKF QM  LI++Y+N+S   Q  I  +DLD FWDM
Sbjct: 215 KGSEVPQSVKDEIDVACGQTKLLTTDKFMQMRTLINEYDNKS--GQMLITTDDLDGFWDM 272

Query: 91  IYIQL 95
           + +Q+
Sbjct: 273 LLLQV 277

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003456|ref|XP_002422739.1| hepatoma up-regulated protein, putative [Pediculus humanus corporis] gi|212505572|gb|EEB10001.1| hepatoma up-regulated protein, putative [Pediculus humanus corporis]

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 32 DTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMI 91
          D NI  D +  I  VVG+T+LL S+KF+Q   LIDQ EN++  ++  I  NDL  FW++I
Sbjct: 32 DKNISRDTQGRIRSVVGKTRLLLSEKFKQFEGLIDQSENKT--SEKEITLNDLQGFWELI 89

Query: 92 YIQL 95
           IQ+
Sbjct: 90 LIQV 93

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|148233670|ref|NP_001090081.1| uncharacterized protein LOC735156 [Xenopus laevis] gi|68534625|gb|AAH99363.1| MGC116559 protein [Xenopus laevis]

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 34  NIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYI 93
           +IPED +D I   VGQT+LL +++F+Q   L+D  E +  + +  +   DL+ FWDMIY 
Sbjct: 151 DIPEDAKDVIRTTVGQTRLLMTERFKQFEGLVDNCEFKRGEKETTL--TDLEGFWDMIYY 208

Query: 94  QLYTTN 99
           Q+   N
Sbjct: 209 QIEDVN 214

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198428694|ref|XP_002131828.1| PREDICTED: similar to discs, large (Drosophila) homolog-associated protein 5 [Ciona intestinalis]

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 4/63 (6%)

Query: 36  PEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQ---SEQAQPRILENDLDSFWDMIY 92
           P DIRDEI  V+GQT+L+ +++F Q + LID+ + +   S+  +P +L +DL  FWDMIY
Sbjct: 261 PTDIRDEIRTVIGQTRLVITERFTQFTTLIDRADGKNGCSKDDRP-VLLSDLRGFWDMIY 319

Query: 93  IQL 95
            Q+
Sbjct: 320 FQV 322

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|52354687|gb|AAH82949.1| LOC494809 protein, partial [Xenopus laevis]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 32  DTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMI 91
           + +IPED +D I   VGQT+LL +++F+Q   L+D  E +  +        DL+ FWDMI
Sbjct: 517 EMDIPEDAKDLIRTTVGQTRLLMNERFKQFEGLVDNCEFK--RGDKETTCTDLEGFWDMI 574

Query: 92  YIQL 95
           Y Q+
Sbjct: 575 YFQI 578

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345309690|ref|XP_001515665.2| PREDICTED: disks large-associated protein 5-like, partial [Ornithorhynchus anatinus]

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 34  NIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYI 93
           +IPED +D I   VGQT+LL +++F+Q   L+D  + +  + Q      DLD FWDM++ 
Sbjct: 437 DIPEDAKDLIRTTVGQTRLLMTERFRQFEGLVDDCDLK--RGQRETTCTDLDGFWDMVHF 494

Query: 94  QL 95
           Q+
Sbjct: 495 QI 496

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449504583|ref|XP_004174611.1| PREDICTED: disks large-associated protein 5 [Taeniopygia guttata]

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 34  NIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYI 93
           +IPED +D I   VGQT+LL  ++F+Q   L+D  E +  + +      DLD FWDMI  
Sbjct: 392 DIPEDAKDLIRSTVGQTRLLIGERFKQFEGLVDNCEFK--RGEKETTCTDLDGFWDMINF 449

Query: 94  QLYTTN 99
           Q+   N
Sbjct: 450 QIEDVN 455

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|196008195|ref|XP_002113963.1| hypothetical protein TRIADDRAFT_57926 [Trichoplax adhaerens] gi|190582982|gb|EDV23053.1| hypothetical protein TRIADDRAFT_57926 [Trichoplax adhaerens]

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 37  EDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQLY 96
           EDIR +ID  VGQ +LL + KF+Q   LID+  +   +   +  E+DL+ FW+M++IQ+ 
Sbjct: 377 EDIRGQIDSAVGQAQLLINKKFKQFHQLIDK--SLRTETPHKAFESDLEGFWEMVFIQVE 434

Query: 97  TTN 99
             N
Sbjct: 435 NLN 437

Source: Trichoplax adhaerens

Species: Trichoplax adhaerens

Genus: Trichoplax

Phylum: Placozoa

Superkingdom: Eukaryota

>gi|321461462|gb|EFX72494.1| hypothetical protein DAPPUDRAFT_227521 [Daphnia pulex]

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 35  IPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMIYIQ 94
           IPE+    +  V+GQ  LL  ++F Q + L++ +EN++ + +  I   DL+ FW+MIY+Q
Sbjct: 317 IPEEESGAVRTVIGQAHLLQRERFTQFAGLVNDFENKTGEKE--ITPTDLEGFWEMIYLQ 374

Query: 95  L 95
           +
Sbjct: 375 V 375

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|426233418|ref|XP_004010714.1| PREDICTED: disks large-associated protein 5 [Ovis aries]

 Score = 55.1 bits (131), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 32  DTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMI 91
           D +IP+D +D I   VGQT+LL  ++F+Q   L+D  E +  + +      DLD FWDM+
Sbjct: 455 DLDIPDDAKDLIRTAVGQTRLLMKERFKQFEGLVDNCEYK--RGEKETTCTDLDGFWDMV 512

Query: 92  YIQLYTTN 99
             Q+   N
Sbjct: 513 SFQIEDVN 520

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
UNIPROTKB|D4A2J6	453	Dlgap4 "Disks large-associated	0.63	0.139	0.353	7.7e-08
UNIPROTKB|E1C8K8	975	DLGAP1 "Uncharacterized protei	0.63	0.064	0.384	8e-08
ZFIN|ZDB-GENE-091116-98	980	dlgap1b "discs, large (Drosoph	0.63	0.064	0.384	1.3e-07
RGD|1311247	815	Dlgap5 "discs, large (Drosophi	0.62	0.076	0.375	1.7e-07
UNIPROTKB|Q08DQ9	846	DLGAP5 "Uncharacterized protei	0.66	0.078	0.382	1.9e-07
UNIPROTKB|O14490	977	DLGAP1 "Disks large-associated	0.63	0.064	0.384	2.1e-07
ZFIN|ZDB-GENE-030616-580	999	dlgap1a "discs, large (Drosoph	0.63	0.063	0.369	2.2e-07
UNIPROTKB|E2RMP3	1023	DLGAP1 "Uncharacterized protei	0.63	0.061	0.384	2.3e-07
MGI|MGI:1346065	992	Dlgap1 "discs, large (Drosophi	0.63	0.063	0.384	2.7e-07
RGD|620223	992	Dlgap1 "discs, large (Drosophi	0.63	0.063	0.384	2.7e-07

UNIPROTKB|D4A2J6 Dlgap4 "Disks large-associated protein 4" [Rattus norvegicus (taxid:10116)]

 Score = 114 (45.2 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             K+ N+ E++  ++   VG  +LL S KFQQ   L +Q  N +  A PR    DL  FWD+
Sbjct:   291 KENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQ--NLNPDANPRPTAQDLAGFWDL 348

Query:    91 IYIQL 95
             + + +
Sbjct:   349 LQLSI 353

GO:0007267 "cell-cell signaling" evidence=IEA

UNIPROTKB|E1C8K8 DLGAP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 122 (48.0 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct:   817 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 874

Query:    91 IYIQL 95
             + + +
Sbjct:   875 LQLSI 879

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IEA

ZFIN|ZDB-GENE-091116-98 dlgap1b "discs, large (Drosophila) homolog-associated protein 1b" [Danio rerio (taxid:7955)]

 Score = 126 (49.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 25/65 (38%), Positives = 38/65 (58%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             ++  +PEDI  +I   VG  +LL + KFQQ  +L +  EN +  A PR +  DL  FWDM
Sbjct:   821 RENELPEDILGKIRSAVGSAQLLMAQKFQQFRDLCE--ENLNPNAHPRPMSQDLAGFWDM 878

Query:    91 IYIQL 95
             + + +
Sbjct:   879 LQLSI 883

GO:0007267 "cell-cell signaling" evidence=IEA

RGD|1311247 Dlgap5 "discs, large (Drosophila) homolog-associated protein 5" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
 Identities = 24/64 (37%), Positives = 38/64 (59%)

Query:    32 DTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMI 91
             + +IP+D +D I   VGQT+LL  ++F+Q   L+D  E +  + +      DLD FWDM+
Sbjct:   438 ELDIPDDAKDLIRTAVGQTRLLIMERFRQFEGLVDNCEYKRGEKETTC--TDLDGFWDMV 495

Query:    92 YIQL 95
               Q+
Sbjct:   496 SFQV 499

GO:0000087 "M phase of mitotic cell cycle" evidence=IEA;ISO

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0031616 "spindle pole centrosome" evidence=IEA;ISO

UNIPROTKB|Q08DQ9 DLGAP5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query:    32 DTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDMI 91
             D +IP+D +D I   VGQT+LL  ++F+Q   L+D  E +  + +      DLD FWDM+
Sbjct:   456 DLDIPDDAKDLIRTAVGQTRLLMKERFKQFEGLVDNCEYKRGEKETTC--TDLDGFWDMV 513

Query:    92 YIQLYTTN 99
               Q+   N
Sbjct:   514 SFQIEDVN 521

GO:0031616 "spindle pole centrosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0000087 "M phase of mitotic cell cycle" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IEA

UNIPROTKB|O14490 DLGAP1 "Disks large-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 122 (48.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct:   819 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 876

Query:    91 IYIQL 95
             + + +
Sbjct:   877 LQLSI 881

GO:0030054 "cell junction" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IEA

GO:0007268 "synaptic transmission" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-030616-580 dlgap1a "discs, large (Drosophila) homolog-associated protein 1a" [Danio rerio (taxid:7955)]

 Score = 118 (46.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             K+  +P+++  +I   VG  +LL S KFQQ   L +  EN +  A PR +  DL  FWDM
Sbjct:   839 KENKMPDEVLGKIRGAVGSAQLLMSQKFQQFRELCE--ENLNPNAHPRPVAQDLAGFWDM 896

Query:    91 IYIQL 95
             + + +
Sbjct:   897 LQLSI 901

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IEA

UNIPROTKB|E2RMP3 DLGAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 122 (48.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct:   865 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 922

Query:    91 IYIQL 95
             + + +
Sbjct:   923 LQLSI 927

GO:0014069 "postsynaptic density" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IEA

MGI|MGI:1346065 Dlgap1 "discs, large (Drosophila) homolog-associated protein 1" [Mus musculus (taxid:10090)]

 Score = 122 (48.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct:   834 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 891

Query:    91 IYIQL 95
             + + +
Sbjct:   892 LQLSI 896

GO:0005886 "plasma membrane" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0007268 "synaptic transmission" evidence=TAS

GO:0014069 "postsynaptic density" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0032403 "protein complex binding" evidence=ISO

GO:0035418 "protein localization to synapse" evidence=ISO

GO:0045202 "synapse" evidence=ISO;IDA

GO:0045211 "postsynaptic membrane" evidence=ISO

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=ISO

GO:0070842 "aggresome assembly" evidence=ISO

RGD|620223 Dlgap1 "discs, large (Drosophila) homolog-associated protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query:    31 KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
             ++ N+PEDI  +I   VG  +LL + KF Q   L +  EN +  A PR    DL  FWDM
Sbjct:   834 RENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCE--ENLNPNAHPRPTSQDLAGFWDM 891

Query:    91 IYIQL 95
             + + +
Sbjct:   892 LQLSI 896

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IEA;ISO

GO:0019904 "protein domain specific binding" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0032403 "protein complex binding" evidence=IPI

GO:0035418 "protein localization to synapse" evidence=IMP

GO:0045202 "synapse" evidence=ISO;IDA

GO:0045211 "postsynaptic membrane" evidence=IDA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IMP

GO:0070842 "aggresome assembly" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	100
pfam03359	342	pfam03359, GKAP, Guanylate-kinase-associated prote	3e-15

>gnl|CDD|217512 pfam03359, GKAP, Guanylate-kinase-associated protein (GKAP) protein

 Score = 68.7 bits (168), Expect = 3e-15
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 31  KDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRILENDLDSFWDM 90
           ++  +PE++   I   VGQ +LL S KFQQ   L DQ  N    A+PR    DL  FWDM
Sbjct: 188 EENELPEEVLGLIRTAVGQARLLMSQKFQQFEGLCDQNLNPR--AEPRTTSQDLAGFWDM 245

Query: 91  IYIQL 95
           + +Q+
Sbjct: 246 LQLQI 250

Length = 342

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
PF03359	357	GKAP: Guanylate-kinase-associated protein (GKAP) p	100.0
KOG3971|consensus	758		99.95
KOG3971|consensus	758		95.24
PF08482	133	HrpB_C: ATP-dependent helicase C-terminal; InterPr	80.07

>PF03359 GKAP: Guanylate-kinase-associated protein (GKAP) protein; InterPro: IPR005026 The protein called postsynaptic density (PSD) is a specialised submembranous structure within which synaptic membrane proteins are linked to cytoskeleton and signalling proteins

Probab=100.00  E-value=5.9e-42  Score=276.13  Aligned_cols=94  Identities=30%  Similarity=0.525  Sum_probs=87.7

Q ss_pred             echhhHHHHHHHHHHHHHHHhccC----CCCCCCCChhhHHHHHhhhhhhhhHHHHhHHHHHHHHHHhcCcCCCCCCCCC
Q psy11215          5 IEIPEVFVKRKSWKASLRKNSFIT----PPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPRIL   80 (100)
Q Consensus         5 ~e~~~~yf~~~l~~E~~RL~~lc~----~~~~~~lpeei~g~Ir~aVGqa~LL~~~Kf~QF~gL~~~~~~~~~~~~~~~t   80 (100)
                      .+.++.||+++|++|++||++||.    ..++++||||+.|.||+|||||||||++||+||+|||++|+++.+  .++||
T Consensus       167 ~~~dg~yF~~ll~~E~~RL~~lC~~~e~~~~~~~lpee~~~~ir~avGqa~LL~~qKf~QF~~L~~~~~~~~~--~~~~t  244 (357)
T PF03359_consen  167 CERDGHYFRKLLQSETERLEGLCAEWEKEEEENDLPEEAKGLIRSAVGQARLLMSQKFKQFEGLCQQNENPSG--EPPTT  244 (357)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCccc--CCCcc
Confidence            467788999999999999999998    666889999999999999999999999999999999999999754  55999


Q ss_pred             cchhHHHHHHHHHhhhccCC
Q psy11215         81 ENDLDSFWDMIYIQLYTTNS  100 (100)
Q Consensus        81 ~~DL~GFWDmv~lqVedv~s  100 (100)
                      ++||+||||||+|||+||++
T Consensus       245 ~~DL~GFWDmv~lqVedv~~  264 (357)
T PF03359_consen  245 CQDLAGFWDMVYLQVEDVDK  264 (357)
T ss_pred             hhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999974

Guanylate-kinase-associated protein (PSD-95/synapse-associated protein 90) is one of the major components of PSD, and functions as a scaffold protein for various ion channels and associated signalling molecules.; GO: 0007267 cell-cell signaling

>KOG3971|consensus

Probab=99.95  E-value=3e-29  Score=217.33  Aligned_cols=92  Identities=23%  Similarity=0.404  Sum_probs=83.7

Q ss_pred             hhhHHHHHHHHHHHHHHHhccC----CCCC----CCCChhhHHHHHhhhhhhhhHHHHhHHHHHHHHHHhcCcCCCCCCC
Q psy11215          7 IPEVFVKRKSWKASLRKNSFIT----PPKD----TNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLIDQYENQSEQAQPR   78 (100)
Q Consensus         7 ~~~~yf~~~l~~E~~RL~~lc~----~~~~----~~lpeei~g~Ir~aVGqa~LL~~~Kf~QF~gL~~~~~~~~~~~~~~   78 (100)
                      .++.||++++.+|+.||++||.    ..++    +++|||++|.||+|||+|||||+|||+||++||++|+++  ++.|+
T Consensus       554 rdG~~flKll~~e~srLe~~~~qae~e~e~~~~~~~lsEd~lg~lrSAvgsarLLvsqK~~qF~~Lc~~Nlnp--t~~~r  631 (758)
T KOG3971|consen  554 RDGNWFLKLLAAEQSRLEGWCPQAETEAEEAGPQNDLSEDVLGKLRSAVGSARLLVSQKFQQFPELCEENLNP--TDLPR  631 (758)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHhhhHHhcCCCCCccHHHHHHHHhccCchhhHHHHHhhhHHHHHHhccCC--ccCCC
Confidence            3455999999999999999998    3333    499999999999999999999999999999999999996  57789


Q ss_pred             CCcchhHHHHHHHHHhhhccCC
Q psy11215         79 ILENDLDSFWDMIYIQLYTTNS  100 (100)
Q Consensus        79 ~t~~DL~GFWDmv~lqVedv~s  100 (100)
                      +|.+||+||||||+++||||.+
T Consensus       632 ~T~qdlagfwdml~lsiEdv~~  653 (758)
T KOG3971|consen  632 PTLQDLAGFWDLLQLSVEDISM  653 (758)
T ss_pred             CchhhhhhhHHHHHHHhhhhhh
Confidence            9999999999999999999863

>KOG3971|consensus

Probab=95.24  E-value=0.002  Score=57.61  Aligned_cols=68  Identities=18%  Similarity=0.135  Sum_probs=62.3

Q ss_pred             CCCCCCCChhhHHHHHhhhhhhhhHHHHhHHHHHHHHH---HhcCcCCCCCCCCCcchhHH-HHHHHHHhhhcc
Q psy11215         29 PPKDTNIPEDIRDEIDCVVGQTKLLTSDKFQQMSNLID---QYENQSEQAQPRILENDLDS-FWDMIYIQLYTT   98 (100)
Q Consensus        29 ~~~~~~lpeei~g~Ir~aVGqa~LL~~~Kf~QF~gL~~---~~~~~~~~~~~~~t~~DL~G-FWDmv~lqVedv   98 (100)
                      -.....+|++.+..||+++++++.+++..+.+|++.++   +++...|..  .+|+.|.++ +|+|..+|+++|
T Consensus       365 ~~~s~~~Pa~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Gi~--~~t~~~~d~~~e~~~~~q~~sv  436 (758)
T KOG3971|consen  365 TKLSIDAPADAKDPIRTAVNQTRSSMKERSSSSRGKVNGRCNRLYSIGIQ--ETTCTDPDKEGEDMSRFQIESV  436 (758)
T ss_pred             ccccccCCCcccCCCCccccccccccccccccccccccccccccccCCcc--ccccccccccccccchhhhhhh
Confidence            34556899999999999999999999999999999999   888888877  899999999 999999999886

>PF08482 HrpB_C: ATP-dependent helicase C-terminal; InterPro: IPR013689 This domain is found near the C terminus of bacterial ATP-dependent helicases such as HrpB

Probab=80.07  E-value=1.1  Score=32.62  Aligned_cols=45  Identities=24%  Similarity=0.378  Sum_probs=31.9

Q ss_pred             hHHHHhHHHHHHHHHHhcCc-----------CCCCCCCCCcchhHHHHHHHHHhhh
Q psy11215         52 LLTSDKFQQMSNLIDQYENQ-----------SEQAQPRILENDLDSFWDMIYIQLY   96 (100)
Q Consensus        52 LL~~~Kf~QF~gL~~~~~~~-----------~~~~~~~~t~~DL~GFWDmv~lqVe   96 (100)
                      -.++-|++.|.|+.+.-.-.           +|...|.-+.+||+|||.--|-+|.
T Consensus        62 P~lsvrlQE~FG~~~tP~i~~Grvpl~l~LLSPa~RPiqvT~DL~~FW~~sY~~Vr  117 (133)
T PF08482_consen   62 PVLSVRLQELFGLTETPRIAGGRVPLTLELLSPAGRPIQVTQDLASFWQGSYPEVR  117 (133)
T ss_pred             cEEEEeHHHHhCCCCCCeecCCCceeEEEEeCCCCCceeeeCCHHHHhcccHHHHH
Confidence            55688999999987542221           2334556678999999998887774

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00