Psyllid ID: psy11220

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMARRQCSEAEVRLEERGVQ
Secondary Structure (PSIPRED)
cEEEcccccHHHHHHHHHcccHHHHHHHHcccccccccccccccccEEcccEEEcccccEEEEEEEcccccccccccEEEEEEEEEEHHcccccccEEEEEEEEEEEccccccccccEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccEEEHHHHHHHHHHHHHcccHHHHHHHHccccccccccccEEEccccccccccccccccEEEEEEEcccccEEEccEEEEEEEEEEEccccccccEEEEcEEEEcccHHccccEEEEEEEcccccc
Coil and Loop (DISEMBL)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALeaaddgsgdvKYHLGTYIERLNRVTNKNIRLAVvanpshleavdpvvqgktraeqfyrgdnegkklEYSVNIKIKSMARRQCSEAEVRLEERGVQ
Flexible Loop (DISEMBL)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALeaaddgsgDVKYHLGTYIERLNRVTNKNIRLAVvanpshleavdpvvqgktraeqfyrgdnegkkleysvnikiksmarrqcseaevrleergvq
Low Complexity Region (SEG)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMARRQCSEAEVRLEERGVQ
Disordered region (IsUnstruct)
***FSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFY*********EYSVNIK**********************
Disordered Region (DISOPRED)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMARRQCSEAEVRLE*****
Disordered Region (DISEMBL)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSM******************
Disordered Region (DISPRO)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEA***GSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMARRQCSEAEVRLEE****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMARRQCSEAEVRLEERGVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
Q9ULD0	1010	2-oxoglutarate dehydrogen	yes	N/A	0.708	0.089	0.802	1e-36
Q5R9L8	1010	2-oxoglutarate dehydrogen	yes	N/A	0.708	0.089	0.802	1e-36
Q68EW0	1018	2-oxoglutarate dehydrogen	N/A	N/A	0.708	0.088	0.769	5e-35
Q6P6Z8	1021	2-oxoglutarate dehydrogen	N/A	N/A	0.708	0.088	0.758	6e-34
Q5RCB8	1023	2-oxoglutarate dehydrogen	no	N/A	0.708	0.087	0.758	7e-34
Q148N0	1023	2-oxoglutarate dehydrogen	no	N/A	0.708	0.087	0.758	8e-34
Q60HE2	1023	2-oxoglutarate dehydrogen	N/A	N/A	0.708	0.087	0.758	8e-34
Q02218	1023	2-oxoglutarate dehydrogen	no	N/A	0.708	0.087	0.758	8e-34
Q60597	1023	2-oxoglutarate dehydrogen	no	N/A	0.708	0.087	0.747	2e-33
Q5XI78	1023	2-oxoglutarate dehydrogen	no	N/A	0.708	0.087	0.747	2e-33

>sp|Q9ULD0|OGDHL_HUMAN 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=1 SV=3

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 81/91 (89%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct: 300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct: 360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390

Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 2EC: .EC: 4EC: .EC: -

>sp|Q5R9L8|OGDHL_PONAB 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii GN=OGDHL PE=2 SV=2

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 81/91 (89%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct: 300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct: 360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: -

>sp|Q68EW0|OGDHL_XENLA 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis GN=ogdhl PE=2 SV=1

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/91 (76%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK L+QIF QF   LEA+D+GSGDVKYHLG Y ER+NR TNK I L++VA
Sbjct: 308 GRLNVLANVIRKDLDQIFCQFDPKLEASDEGSGDVKYHLGMYHERINRATNKKITLSLVA 367

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEAVDPVVQGKT+AEQFYRGD EG K+
Sbjct: 368 NPSHLEAVDPVVQGKTKAEQFYRGDTEGNKV 398

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: -

>sp|Q6P6Z8|ODO1_XENLA 2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis GN=ogdh PE=2 SV=1

 Score =  142 bits (358), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEA D+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct: 312 GRLNVLANVIRKELEQIFCQFDSKLEATDEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 371

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVVQGKT+AEQFY GD EGKK+
Sbjct: 372 NPSHLEAADPVVQGKTKAEQFYCGDTEGKKV 402

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q5RCB8|ODO1_PONAB 2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH PE=2 SV=1

 Score =  142 bits (357), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q148N0|ODO1_BOVIN 2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH PE=2 SV=1

 Score =  142 bits (357), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q60HE2|ODO1_MACFA 2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=OGDH PE=2 SV=1

 Score =  142 bits (357), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q02218|ODO1_HUMAN 2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3

 Score =  142 bits (357), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 372

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q60597|ODO1_MOUSE 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh PE=1 SV=3

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEAAD+GSGD+KYHLG Y  R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDRNITLSLVA 372

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

>sp|Q5XI78|ODO1_RAT 2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ogdh PE=1 SV=1

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 78/91 (85%), Gaps = 1/91 (1%)

Query: 9   GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
           GRLNVLANV RK LEQIF QF + LEAAD+GSGD+KYHLG Y  R+NRVT++NI L++VA
Sbjct: 313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKYHLGMYHRRINRVTDRNITLSLVA 372

Query: 68  NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct: 373 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 4

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
332017156	1072	2-oxoglutarate dehydrogenase E1 componen	0.708	0.083	0.966	3e-45
350420108	1066	PREDICTED: 2-oxoglutarate dehydrogenase,	0.708	0.084	0.966	4e-45
307204872	1080	2-oxoglutarate dehydrogenase E1 componen	0.708	0.083	0.966	4e-45
328786455	1072	PREDICTED: 2-oxoglutarate dehydrogenase,	0.708	0.083	0.966	4e-45
380017767	1072	PREDICTED: 2-oxoglutarate dehydrogenase,	0.708	0.083	0.966	4e-45
229892296	1021	oxoglutarate (alpha-ketoglutarate) dehyd	0.708	0.088	0.966	4e-45
383862927	1075	PREDICTED: 2-oxoglutarate dehydrogenase,	0.708	0.083	0.966	5e-45
340720185	1044	PREDICTED: 2-oxoglutarate dehydrogenase,	0.708	0.086	0.966	5e-45
242024794	1023	2-oxoglutarate dehydrogenase, putative [	0.708	0.087	0.966	5e-45
307178145	925	2-oxoglutarate dehydrogenase E1 componen	0.708	0.097	0.955	7e-45

>gi|332017156|gb|EGI57955.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Acromyrmex echinatior]

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 329 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 388

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 389 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 418

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420108|ref|XP_003492401.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Bombus impatiens]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 322 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 381

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 382 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 411

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204872|gb|EFN83427.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Harpegnathos saltator]

 Score =  185 bits (470), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 322 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 381

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 382 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 411

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786455|ref|XP_391838.3| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Apis mellifera]

 Score =  185 bits (470), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 329 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 388

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 389 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 418

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017767|ref|XP_003692817.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Apis florea]

 Score =  185 bits (470), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 329 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 388

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 389 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 418

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|229892296|ref|NP_001153501.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Nasonia vitripennis]

 Score =  185 bits (470), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 321 GRLNVLANVCRKPLNQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 380

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 381 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 410

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862927|ref|XP_003706934.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Megachile rotundata]

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 329 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 388

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 389 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 418

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720185|ref|XP_003398522.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Bombus terrestris]

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 344 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 403

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 404 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 433

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242024794|ref|XP_002432811.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] gi|212518320|gb|EEB20073.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis]

 Score =  185 bits (469), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/90 (96%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAV AN
Sbjct: 323 GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVCAN 382

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct: 383 PSHLEAVDPVVQGKTRAEQFYRGDGEGKKV 412

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178145|gb|EFN66953.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Camponotus floridanus]

 Score =  185 bits (469), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 86/90 (95%), Positives = 88/90 (97%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVLANVCRKPL QIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct: 182 GRLNVLANVCRKPLSQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 241

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
           PSHLEAVDP+VQGKTRAEQFYRGD EGKK+
Sbjct: 242 PSHLEAVDPIVQGKTRAEQFYRGDGEGKKV 271

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
FB|FBgn0010352	1105	Nc73EF "Neural conserved at 73	0.708	0.081	0.944	2.7e-40
UNIPROTKB|F1MWG1	1010	OGDHL "Uncharacterized protein	0.708	0.089	0.802	1.1e-32
UNIPROTKB|Q9ULD0	1010	OGDHL "2-oxoglutarate dehydrog	0.708	0.089	0.802	1.1e-32
UNIPROTKB|F1PK40	1021	OGDHL "Uncharacterized protein	0.708	0.088	0.802	1.2e-32
RGD|1310916	1029	Ogdhl "oxoglutarate dehydrogen	0.708	0.087	0.791	2.5e-32
UNIPROTKB|E1C4Z4	631	OGDH "Uncharacterized protein"	0.708	0.142	0.769	1.3e-31
UNIPROTKB|E1BTL0	1014	OGDHL "Uncharacterized protein	0.708	0.088	0.780	1.7e-31
ZFIN|ZDB-GENE-030131-2143	1024	ogdha "oxoglutarate (alpha-ket	0.708	0.087	0.758	4.7e-31
UNIPROTKB|H9GW68	798	OGDH "Uncharacterized protein"	0.708	0.112	0.758	9.6e-31
UNIPROTKB|E9PFG7	873	OGDH "2-oxoglutarate dehydroge	0.708	0.103	0.758	1.2e-30

FB|FBgn0010352 Nc73EF "Neural conserved at 73EF" [Drosophila melanogaster (taxid:7227)]

 Score = 440 (159.9 bits), Expect = 2.7e-40, P = 2.7e-40
 Identities = 85/90 (94%), Positives = 86/90 (95%)

Query:     9 GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
             GRLN LANVCRKPL QIFTQFA LEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN
Sbjct:   308 GRLNTLANVCRKPLNQIFTQFAGLEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 367

Query:    69 PSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             PSHLEAVDPVVQGKTRAEQFYRGD EGKK+
Sbjct:   368 PSHLEAVDPVVQGKTRAEQFYRGDQEGKKV 397

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=ISS

GO:0009353 "mitochondrial oxoglutarate dehydrogenase complex" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|F1MWG1 OGDHL "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 368 (134.6 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct:   300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct:   360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

UNIPROTKB|Q9ULD0 OGDHL "2-oxoglutarate dehydrogenase-like, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct:   300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct:   360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 390

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006096 "glycolysis" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1PK40 OGDHL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 368 (134.6 bits), Expect = 1.2e-32, P = 1.2e-32
 Identities = 73/91 (80%), Positives = 81/91 (89%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct:   296 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 355

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEAVDPVVQGKT+AEQFYRGD +GKK+
Sbjct:   356 NPSHLEAVDPVVQGKTKAEQFYRGDAQGKKV 386

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

RGD|1310916 Ogdhl "oxoglutarate dehydrogenase-like" [Rattus norvegicus (taxid:10116)]

 Score = 365 (133.5 bits), Expect = 2.5e-32, P = 2.5e-32
 Identities = 72/91 (79%), Positives = 81/91 (89%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NRVTN+NI L++VA
Sbjct:   300 GRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVA 359

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEAVDPVVQGKT+AEQFYRGD +G+K+
Sbjct:   360 NPSHLEAVDPVVQGKTKAEQFYRGDAQGRKV 390

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

UNIPROTKB|E1C4Z4 OGDH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 353 (129.3 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 70/91 (76%), Positives = 79/91 (86%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct:   308 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 367

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEA DPVVQGKT+AEQFY GD EGKK+
Sbjct:   368 NPSHLEAADPVVQGKTKAEQFYCGDTEGKKV 398

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0021695 "cerebellar cortex development" evidence=IEA

GO:0021756 "striatum development" evidence=IEA

GO:0021766 "hippocampus development" evidence=IEA

GO:0021794 "thalamus development" evidence=IEA

GO:0021860 "pyramidal neuron development" evidence=IEA

GO:0022028 "tangential migration from the subventricular zone to the olfactory bulb" evidence=IEA

GO:0034602 "oxoglutarate dehydrogenase (NAD+) activity" evidence=IEA

GO:0061034 "olfactory bulb mitral cell layer development" evidence=IEA

UNIPROTKB|E1BTL0 OGDHL "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 357 (130.7 bits), Expect = 1.7e-31, P = 1.7e-31
 Identities = 71/91 (78%), Positives = 78/91 (85%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF   LEAAD+GSGDVKYHLG Y ER+NR TNK I L+++A
Sbjct:   304 GRLNVLANVIRKELEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRATNKKITLSLMA 363

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEAVDPVVQGKT+AEQFYRGD  GKK+
Sbjct:   364 NPSHLEAVDPVVQGKTKAEQFYRGDTAGKKV 394

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

ZFIN|ZDB-GENE-030131-2143 ogdha "oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide)" [Danio rerio (taxid:7955)]

 Score = 353 (129.3 bits), Expect = 4.7e-31, P = 4.7e-31
 Identities = 69/91 (75%), Positives = 80/91 (87%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVTN+NI L++VA
Sbjct:   313 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTNRNITLSLVA 372

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEAV+PVVQGKT+AEQFY GD +GK++
Sbjct:   373 NPSHLEAVNPVVQGKTKAEQFYSGDTDGKRV 403

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

UNIPROTKB|H9GW68 OGDH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 348 (127.6 bits), Expect = 9.6e-31, P = 9.6e-31
 Identities = 69/91 (75%), Positives = 78/91 (85%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct:   207 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 266

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct:   267 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 297

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

UNIPROTKB|E9PFG7 OGDH "2-oxoglutarate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 348 (127.6 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 69/91 (75%), Positives = 78/91 (85%)

Query:     9 GRLNVLANVCRKPLEQIFTQF-AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVA 67
             GRLNVLANV RK LEQIF QF + LEAAD+GSGDVKYHLG Y  R+NRVT++NI L++VA
Sbjct:   163 GRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVA 222

Query:    68 NPSHLEAVDPVVQGKTRAEQFYRGDNEGKKL 98
             NPSHLEA DPVV GKT+AEQFY GD EGKK+
Sbjct:   223 NPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 253

GO:0004591 "oxoglutarate dehydrogenase (succinyl-transferring) activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0030976 "thiamine pyrophosphate binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A5U1U6	KGD_MYCTA	4, ., 1, ., 1, ., 7, 1	0.5308	0.6220	0.0641	yes	N/A
Q8NRC3	ODO12_CORGL	1, ., 2, ., 4, ., 2	0.5060	0.6377	0.0663	yes	N/A
O74378	ODO1_SCHPO	1, ., 2, ., 4, ., 2	0.5529	0.6535	0.0822	yes	N/A
O61199	ODO1_CAEEL	1, ., 2, ., 4, ., 2	0.75	0.6614	0.0816	yes	N/A
A6WXF0	ODO1_OCHA4	1, ., 2, ., 4, ., 2	0.5121	0.6062	0.0769	yes	N/A
A0R2B1	KGD_MYCS2	4, ., 1, ., 1, ., 7, 1	0.5238	0.5984	0.0619	yes	N/A
A0PVU7	KGD_MYCUA	4, ., 1, ., 1, ., 7, 1	0.5185	0.6220	0.0638	yes	N/A
Q54JE4	ODO1_DICDI	1, ., 2, ., 4, ., 2	0.5483	0.6929	0.0868	yes	N/A
Q9ULD0	OGDHL_HUMAN	1, ., 2, ., 4, ., -	0.8021	0.7086	0.0891	yes	N/A
Q5R9L8	OGDHL_PONAB	1, ., 2, ., 4, ., -	0.8021	0.7086	0.0891	yes	N/A
P20967	ODO1_YEAST	1, ., 2, ., 4, ., 2	0.5949	0.5984	0.0749	yes	N/A
A1KI36	KGD_MYCBP	4, ., 1, ., 1, ., 7, 1	0.5308	0.6220	0.0641	yes	N/A
O50463	KGD_MYCTU	4, ., 1, ., 1, ., 7, 1	0.5308	0.6220	0.0641	yes	N/A
Q7U0A6	KGD_MYCBO	4, ., 1, ., 1, ., 7, 1	0.5308	0.6220	0.0641	yes	N/A
A1TDK2	KGD_MYCVP	4, ., 1, ., 1, ., 7, 1	0.5476	0.5984	0.0611	yes	N/A
Q9CC97	KGD_MYCLE	4, ., 1, ., 1, ., 7, 1	0.5185	0.6220	0.0638	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	127
cd02016	265	cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate	2e-41
PRK09404	924	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 co	7e-32
COG0567	906	COG0567, SucA, 2-oxoglutarate dehydrogenase comple	4e-31
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	5e-28
TIGR00239	929	TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenas	1e-22

>gnl|CDD|238974 cd02016, TPP_E1_OGDC_like, Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)

 Score =  137 bits (347), Expect = 2e-41
 Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 4/92 (4%)

Query: 9   GRLNVLANVCRKPLEQIFTQF---AALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAV 65
           GRLNVLANV  KPLEQIF++F   +     D+GSGDVKYHLG   +R      K + L++
Sbjct: 50  GRLNVLANVLGKPLEQIFSEFEGKSEFPEDDEGSGDVKYHLGYSSDRKTPS-GKKVHLSL 108

Query: 66  VANPSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
             NPSHLEAV+PVV GKTRA+Q YRGD E  K
Sbjct: 109 APNPSHLEAVNPVVMGKTRAKQDYRGDGERDK 140

OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle. Length = 265

>gnl|CDD|236499 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed

 Score =  117 bits (297), Expect = 7e-32
 Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 9   GRLNVLANVCRKPLEQIFTQFA--ALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
           GRLNVL NV  KP   +F +F          GSGDVKYHLG   +R        + L++ 
Sbjct: 253 GRLNVLVNVLGKPPRDLFAEFEGKHGPDEVLGSGDVKYHLGFSSDR--ETDGGEVHLSLA 310

Query: 67  ANPSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
            NPSHLE V+PVV+G  RA Q  RGD + +K
Sbjct: 311 FNPSHLEIVNPVVEGSVRARQDRRGDGQDRK 341

Length = 924

>gnl|CDD|223641 COG0567, SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]

 Score =  115 bits (291), Expect = 4e-31
 Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVL NV  KP   IF +F    A  D SGDVKYHLG   +R  +     + L++  N
Sbjct: 239 GRLNVLVNVLGKPYRDIFDEFEGKSAEPDLSGDVKYHLGFSSDR--QTDGGKVHLSLAFN 296

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
           PSHLE V+PVV+G  RA+Q   GD E  K
Sbjct: 297 PSHLEIVNPVVEGSVRAKQDRLGDTERDK 325

Length = 906

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score =  106 bits (268), Expect = 5e-28
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 9/84 (10%)

Query: 9   GRLNVLANVCRKPLEQIFTQF--AALEAADDGSGDVKYHLG---TYIERLNRVTNKNIRL 63
           GRLNVLAN+  KP  QIF +F       +  GSGDVKYHLG   T+     ++    I++
Sbjct: 557 GRLNVLANIVGKPYSQIFREFEGNLDPRSAQGSGDVKYHLGAEGTFT----QMFGDEIKV 612

Query: 64  AVVANPSHLEAVDPVVQGKTRAEQ 87
           ++ ANPSHLEAVDPV++G  RA+Q
Sbjct: 613 SLAANPSHLEAVDPVLEGIVRAKQ 636

Length = 1228

>gnl|CDD|161785 TIGR00239, 2oxo_dh_E1, 2-oxoglutarate dehydrogenase, E1 component

 Score = 91.1 bits (226), Expect = 1e-22
 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 3/90 (3%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAAD--DGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
           GRLNVL NV  KP E IF++FA    +   DG+GDVKYH+G +         K + LA+ 
Sbjct: 253 GRLNVLVNVLGKPPEDIFSEFAGKHKSHLPDGTGDVKYHMGRFSSDFT-TDGKLVHLALA 311

Query: 67  ANPSHLEAVDPVVQGKTRAEQFYRGDNEGK 96
            NPSHLE V PVV G TRA      D+   
Sbjct: 312 FNPSHLEIVSPVVIGSTRARLDRLNDSPES 341

The 2-oxoglutarate dehydrogenase complex consists of this thiamine pyrophosphate-binding subunit (E1), dihydrolipoamide succinyltransferase (E2), and lipoamide dehydrogenase (E3). The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase [Energy metabolism, TCA cycle]. Length = 929

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
KOG0450|consensus	1017		100.0
COG0567	906	SucA 2-oxoglutarate dehydrogenase complex, dehydro	100.0
PRK12270	1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	100.0
TIGR00239	929	2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon	100.0
cd02016	265	TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami	100.0
KOG0451|consensus	913		99.96
PRK09404	924	sucA 2-oxoglutarate dehydrogenase E1 component; Re	99.96
PF00676	300	E1_dh: Dehydrogenase E1 component; InterPro: IPR00	97.25
cd02000	293	TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP)	95.82
PLN02374	433	pyruvate dehydrogenase (acetyl-transferring)	94.52

>KOG0450|consensus

Probab=100.00  E-value=1.4e-41  Score=308.51  Aligned_cols=107  Identities=71%  Similarity=0.996  Sum_probs=99.8

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceee
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQ   80 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~   80 (127)
                      ||||||||||||||+||++||+++||+||++..+..++|||||||||++.++.++.+||.|+|+|++|||||||+||||+
T Consensus       305 iviGMpHRGRLNvL~NVvRKpl~qIfseF~g~~~~DeGSGDVKYHLG~~~~R~~r~s~k~i~LslVANPSHLEA~DPVV~  384 (1017)
T KOG0450|consen  305 IVIGMPHRGRLNVLANVVRKPLEQIFSEFSGLEAADEGSGDVKYHLGMYYERPNRVSGKNITLSLVANPSHLEAVDPVVM  384 (1017)
T ss_pred             eEecCCccchhHHHHHHHhhHHHHHHHhccCCCCCcCCCCceeeeeccccccccccCCceeEEEEecCchhhcccCceee
Confidence            69999999999999999999999999999997777779999999999999999877999999999999999999999999


Q ss_pred             hhhhhhHhhcCCCCCCeeEEeeceeeechh
Q psy11220         81 GKTRAEQFYRGDNEGKKLEYSVNIKIKSMA  110 (127)
Q Consensus        81 GkaRAkQd~~~d~~~~kvl~~~~~~~~~~~  110 (127)
                      |||||+|.+.+|.+++|+|.   |+||.-|
T Consensus       385 GKtrA~q~y~~D~~~~k~m~---ILiHGDa  411 (1017)
T KOG0450|consen  385 GKTRAEQFYTGDEEGKKVMG---ILIHGDA  411 (1017)
T ss_pred             chHHHHHHhccccccceeEE---EEEecch
Confidence            99999999999999999987   4576543

>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]

Probab=100.00  E-value=3.9e-41  Score=309.59  Aligned_cols=101  Identities=45%  Similarity=0.591  Sum_probs=92.6

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceee
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQ   80 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~   80 (127)
                      ||||||||||||||+||||||++.||+||++.......+||||||||+++++.+  .++.|+|+|++||||||+|||||+
T Consensus       231 vviGMaHRGRLNvL~nvlgKp~~~if~eF~g~~~~~~~sGDVKYH~G~~~~~~~--~~~~v~l~La~NPSHLE~v~PVV~  308 (906)
T COG0567         231 VVIGMAHRGRLNVLVNVLGKPYRDIFDEFEGKSAEPDLSGDVKYHLGFSSDRQT--DGGKVHLSLAFNPSHLEIVNPVVE  308 (906)
T ss_pred             EEecccccchHHHHHHHhCCCHHHHHHHhCCCCCCCCccccccccccccccccc--CCCeeEEEecCCcchhhhhchhhh
Confidence            699999999999999999999999999999987766669999999999998765  455899999999999999999999


Q ss_pred             hhhhhhHhhcCCCCCCeeEEeec
Q psy11220         81 GKTRAEQFYRGDNEGKKLEYSVN  103 (127)
Q Consensus        81 GkaRAkQd~~~d~~~~kvl~~~~  103 (127)
                      |++||+|+.+.|.+.+++|++++
T Consensus       309 G~vRa~Qd~~~d~~~~k~lpili  331 (906)
T COG0567         309 GSVRAKQDRLGDTERDKVLPILI  331 (906)
T ss_pred             cchHhhhhhhccCccceeEEEEE
Confidence            99999999999988888888653

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed

Probab=100.00  E-value=2.1e-37  Score=288.13  Aligned_cols=108  Identities=42%  Similarity=0.533  Sum_probs=91.9

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCC--CCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCce
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEA--ADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPV   78 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~--~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPV   78 (127)
                      +|||||||||||||+||.||||.+||+||+|.-.  ...+|||||||||+..+... ..|++|.++|++|||||||||||
T Consensus       549 vvigm~HRGRLNVLani~gK~y~qiF~EFegn~dp~~~~GsGDVKYHlG~eG~~~~-~~g~~~~v~laaNPSHLEavdpV  627 (1228)
T PRK12270        549 VVIGMAHRGRLNVLANIVGKPYSQIFREFEGNLDPRSAQGSGDVKYHLGAEGTFTQ-MFGDEIKVSLAANPSHLEAVDPV  627 (1228)
T ss_pred             EEecccccchHHHHHHHhcCCHHHHHHHhcCCCCccccCcCcceeeeccCceeeec-cCCCeeEEEEecCchhhhhcchH
Confidence            5899999999999999999999999999998643  34689999999999887554 57888999999999999999999


Q ss_pred             eehhhhhhHhhcCCCCCCeeEEeeceeeechhh
Q psy11220         79 VQGKTRAEQFYRGDNEGKKLEYSVNIKIKSMAR  111 (127)
Q Consensus        79 v~GkaRAkQd~~~d~~~~kvl~~~~~~~~~~~~  111 (127)
                      +.|.+|||||.++.+.  +-..++=|.||.-|.
T Consensus       628 leGivRakQd~l~~g~--~~~~vlpi~~hGdaa  658 (1228)
T PRK12270        628 LEGIVRAKQDRLDKGE--EGFTVLPILLHGDAA  658 (1228)
T ss_pred             hhhhhhhhhhhhcccc--cCCceeEEEEecccc
Confidence            9999999999987433  114455567887654

>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component

Probab=100.00  E-value=5.1e-34  Score=264.13  Aligned_cols=99  Identities=45%  Similarity=0.584  Sum_probs=84.5

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCC--CCCCCccccCc-eeeEEeeccCCceEEEEeecCCCcccccCc
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAAD--DGSGDVKYHLG-TYIERLNRVTNKNIRLAVVANPSHLEAVDP   77 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~--~~sGDVKYHLG-~s~~~~~~~~gk~i~lsL~~NPSHLEaVnP   77 (127)
                      +|||||||||||||+||+|||+++||+||.++....  .++||||||+| ++++..  ..|++++++|++||||||||||
T Consensus       245 ~v~gmaHRGRlnvL~nv~gkp~~~if~ef~g~~~~~~~~g~gdvKyHlg~~~~~~~--~~~~~~~~~l~~npSHLeav~P  322 (929)
T TIGR00239       245 VVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLPDGTGDVKYHMGRFSSDFT--TDGKLVHLALAFNPSHLEIVSP  322 (929)
T ss_pred             EEeccccCCcHHHHHHHhCCCHHHHHHHHcCCCCCcccCCCCCcCccCCCcccccc--cCCCcceeeecCCCcccccccc
Confidence            589999999999999999999999999998865432  37999999999 777644  3678899999999999999999


Q ss_pred             eeehhhhhhHhhcCC-CCCCeeEEe
Q psy11220         78 VVQGKTRAEQFYRGD-NEGKKLEYS  101 (127)
Q Consensus        78 Vv~GkaRAkQd~~~d-~~~~kvl~~  101 (127)
                      |++|+|||+|++.+| ..+++++++
T Consensus       323 va~G~ArA~q~~~~~~~~~~~~v~v  347 (929)
T TIGR00239       323 VVIGSTRARLDRLNDSPESTKVLAI  347 (929)
T ss_pred             hhhhHHHHHHHhcCCcccccceEEE
Confidence            999999999998654 344455554

The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase.

>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)

Probab=100.00  E-value=1.9e-33  Score=230.46  Aligned_cols=100  Identities=55%  Similarity=0.778  Sum_probs=85.7

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCC---CCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCc
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEA---ADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDP   77 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~---~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnP   77 (127)
                      +|+|||||||||+|+|++|||+++||+||.++..   ...++||||||+|++.++.+ .+|++|+++|++||||||+++|
T Consensus        42 ~v~gm~HRgrln~L~~~lg~~~~~if~ef~g~~~~~~~~~~~gdv~yHlg~~~~~~~-~~~~~~~~~l~~npS~l~~~~p  120 (265)
T cd02016          42 VVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEDDEGSGDVKYHLGYSSDRKT-PSGKKVHLSLAPNPSHLEAVNP  120 (265)
T ss_pred             EEeccCcCCcHHHHHHHhCCCHHHHHHHhhCCCCCCCCCCCCCCcCcCCccCccccc-CCCCeeEEEecCCCcccccccC
Confidence            5899999999999999999999999999988654   22469999999999987664 3588999999999999999999


Q ss_pred             eeehhhhhhHhhcCCCCCCeeEEe
Q psy11220         78 VVQGKTRAEQFYRGDNEGKKLEYS  101 (127)
Q Consensus        78 Vv~GkaRAkQd~~~d~~~~kvl~~  101 (127)
                      |++|+|+|+|++..+.++++.+++
T Consensus       121 va~G~A~A~k~~~~~~~~~~~v~v  144 (265)
T cd02016         121 VVMGKTRAKQDYRGDGERDKVLPI  144 (265)
T ss_pred             eehhHHHHHHHhcCCccCCCeEEE
Confidence            999999999998755444455544

OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle.

>KOG0451|consensus

Probab=99.96  E-value=2.8e-31  Score=238.41  Aligned_cols=105  Identities=31%  Similarity=0.481  Sum_probs=89.5

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCC---CCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCc
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAAD---DGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDP   77 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~---~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnP   77 (127)
                      ||||||||||||+|+.+|+.||+.||+|++|..+.+   ...|||.+||-.|.+.+  ..+++++++|++||||||||||
T Consensus       213 viigmpHRGRlnLlt~Ll~fpP~~mFRK~~G~sEFpE~~~A~gDVlSHl~sS~dyk--g~~~~lhvtMlpNPSHLEAvNP  290 (913)
T KOG0451|consen  213 VIIGMPHRGRLNLLTALLNFPPAKMFRKLSGASEFPEDIEAMGDVLSHLHSSEDYK--GLGKKLHVTMLPNPSHLEAVNP  290 (913)
T ss_pred             EEEeccccCcchHHHHHhcCCHHHHHHHhcCcccCchhhhHHHHHHHHhhhhhhhc--ccCCceEEEecCChhhhhccCc
Confidence            589999999999999999999999999998865433   57999999999887743  4789999999999999999999


Q ss_pred             eeehhhhhhHhhcCCCC---------CCeeEEeeceeeechh
Q psy11220         78 VVQGKTRAEQFYRGDNE---------GKKLEYSVNIKIKSMA  110 (127)
Q Consensus        78 Vv~GkaRAkQd~~~d~~---------~~kvl~~~~~~~~~~~  110 (127)
                      |+|||||++|...++++         ++.||   |+++|.-|
T Consensus       291 VAmGKtR~rqqsr~~Gdyspd~sa~~Gd~Vl---nv~vHGDa  329 (913)
T KOG0451|consen  291 VAMGKTRSRQQSRGEGDYSPDSSAPFGDHVL---NVIVHGDA  329 (913)
T ss_pred             hhhcchhHHHHhhcCCCCCCCCcCCCCCceE---EEEEecch
Confidence            99999999999877643         45555   45677543

>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed

Probab=99.96  E-value=2.6e-29  Score=232.83  Aligned_cols=100  Identities=44%  Similarity=0.613  Sum_probs=86.8

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCC--CCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCce
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALE--AADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPV   78 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~--~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPV   78 (127)
                      +|+||+||||||+|+|++|||+++||+||.|+.  ....++||||||||++.++.  ..|+++|+++++||||||+||||
T Consensus       245 ~vigmaHRgrlnvLa~v~G~~~~~ifaEf~Gk~~~~~~~~~GdvkyHlG~~~~~~--g~gg~mhi~l~~npShleav~Pv  322 (924)
T PRK09404        245 IVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEVLGSGDVKYHLGFSSDRE--TDGGEVHLSLAFNPSHLEIVNPV  322 (924)
T ss_pred             EEEecCcCchHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCcccccCcccccc--CCCCeeEeeccCCccccccccCe
Confidence            489999999999999999999999999998875  33357999999999998754  35789999999999999999999


Q ss_pred             eehhhhhhHhhcCC-CCCCeeEEee
Q psy11220         79 VQGKTRAEQFYRGD-NEGKKLEYSV  102 (127)
Q Consensus        79 v~GkaRAkQd~~~d-~~~~kvl~~~  102 (127)
                      ++|+|||+|+..+| .+++++++++
T Consensus       323 a~G~A~A~q~~~~~~~~~~~~v~v~  347 (924)
T PRK09404        323 VEGSVRARQDRRGDGQDRKKVLPIL  347 (924)
T ss_pred             ehhHHHHHHHhcCCcccccceEEEE
Confidence            99999999999766 5556666544

>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex

Probab=97.25  E-value=9e-05  Score=61.33  Aligned_cols=73  Identities=19%  Similarity=0.294  Sum_probs=50.0

Q ss_pred             eccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeehh
Q psy11220          3 SFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGK   82 (127)
Q Consensus         3 iGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~Gk   82 (127)
                      +.+.||++.++|+.  +.|+..+|.||-++.   .+.|+... -....       .+..++...++|+|.+  .|++.|.
T Consensus        49 v~~~yR~~~~~la~--g~~~~~~~~e~~g~~---~g~~g~~~-~~~~~-------~~~~~~~~~~~~vg~~--~p~a~G~  113 (300)
T PF00676_consen   49 VFPYYRDHGHALAR--GIDLEEIFAELLGKA---KGHGGGRH-PLHFS-------DKGLNILGASSPVGAQ--VPIAAGV  113 (300)
T ss_dssp             EEECSTTHHHHHHT--TT-HHHHHHHHHTBT---TSTTTTGC-TTEEE-------BTTTTBEEEESSTTTH--HHHHHHH
T ss_pred             EEecccchhhhhhc--cccccchhHHhcCcc---cCCCCCcc-ccccc-------cccceeeecccccccc--Cccccch
Confidence            34559999999984  556999999997665   23344333 11111       1234677777888777  9999999


Q ss_pred             hhhhHhhc
Q psy11220         83 TRAEQFYR   90 (127)
Q Consensus        83 aRAkQd~~   90 (127)
                      |+|.|...
T Consensus       114 A~a~k~~~  121 (300)
T PF00676_consen  114 ALAIKYRG  121 (300)
T ss_dssp             HHHHHHTT
T ss_pred             hHhhhhcC
Confidence            99999653

Pyruvate dehydrogenase (1.2.4.1 from EC), a component of the multienzyme pyruvate dehydrogenase complex; 2-oxoglutarate dehydrogenase (1.2.4.2 from EC), a component of the multienzyme 2-oxoglutarate dehydrogenase which contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3); and 2-oxoisovalerate dehydrogenase (1.2.4.4 from EC), a component of the multienzyme branched-chain alpha-keto dehydrogenase complex all belong to this family.; GO: 0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 0008152 metabolic process; PDB: 1X7Y_A 1V1M_A 1X7W_A 1OLU_A 2J9F_A 2BEW_A 1V11_A 2BFE_A 1U5B_A 2BEU_A ....

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)

Probab=95.82  E-value=0.024  Score=46.37  Aligned_cols=71  Identities=13%  Similarity=0.138  Sum_probs=55.1

Q ss_pred             CCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeehhhhh
Q psy11220          6 ILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRA   85 (127)
Q Consensus         6 aHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~GkaRA   85 (127)
                      .||+.-..|+  .|.|+.+||.|+-+.......-.+..+|++..            ...+....++|-+.-|+++|.+.|
T Consensus        54 ~yR~~~~~la--~G~~~~~~~~e~~g~~~g~~~G~~g~~h~~~~------------~~~~~~~~g~lG~~~p~a~G~a~a  119 (293)
T cd02000          54 TYRDHGHALA--RGVDLKEMLAELFGKETGPCKGRGGSMHIGDK------------EKNFFGGNGIVGGQVPLAAGAALA  119 (293)
T ss_pred             cchhHHHHHH--cCCCHHHHHHHHcCCCCCCCCCCCCCCCCCch------------hcCccccccccccchhHHHHHHHH
Confidence            8999999997  89999999999987665432223366676532            234567789999999999999999


Q ss_pred             hHhhc
Q psy11220         86 EQFYR   90 (127)
Q Consensus        86 kQd~~   90 (127)
                      .+...
T Consensus       120 ~k~~~  124 (293)
T cd02000         120 LKYRG  124 (293)
T ss_pred             HHHhC
Confidence            98754

PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).

>PLN02374 pyruvate dehydrogenase (acetyl-transferring)

Probab=94.52  E-value=0.072  Score=46.94  Aligned_cols=73  Identities=14%  Similarity=0.211  Sum_probs=52.1

Q ss_pred             eeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCC-CCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceee
Q psy11220          2 VSFSILAGRLNVLANVCRKPLEQIFTQFAALEAAD-DGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQ   80 (127)
Q Consensus         2 ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~-~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~   80 (127)
                      |++ .||++.++|  ..|.|+.+||+|+-++.... .+.|+ .+|++....            .+...-+.|-..-|+++
T Consensus       141 v~~-~yR~h~~~L--a~G~~~~~~mael~Gk~~g~~~Grgg-smH~~~~~~------------~~~g~~g~lG~~lP~Av  204 (433)
T PLN02374        141 VVS-TYRDHVHAL--SKGVPARAVMSELFGKATGCCRGQGG-SMHMFSKEH------------NLLGGFAFIGEGIPVAT  204 (433)
T ss_pred             EEc-cCcChHHhh--hcCCCHHHHHHHHcCCCCCCCCCCCC-cCccCchhh------------CCCCCceeccCchhHHH
Confidence            445 899999999  67999999999998776542 45555 788853221            11123345557789999


Q ss_pred             hhhhhhHhhc
Q psy11220         81 GKTRAEQFYR   90 (127)
Q Consensus        81 GkaRAkQd~~   90 (127)
                      |.+.|.|...
T Consensus       205 GaA~A~k~~~  214 (433)
T PLN02374        205 GAAFSSKYRR  214 (433)
T ss_pred             HHHHHHHHhh
Confidence            9999987653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	127
2xta_A	868	Crystal Structure Of The Suca Domain Of Mycobacteri		4e-17
2xt6_A	1113	Crystal Structure Of Mycobacterium Smegmatis Alpha-		4e-17
2jgd_B	933	E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length =		2e-11
2jgd_A	933	E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length =		2e-11

>pdb|2XTA|A Chain A, Crystal Structure Of The Suca Domain Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase In Complex With Acetyl-Coa (Triclinic Form) Length = 868

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Query: 9   GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLG---TYIERLNRVTNKNIRL 63
           GRLNVLAN+  KP  QIF++F      +   GSGDVKYHLG   TYI+      + +I +
Sbjct: 182 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFG---DNDIEV 238
Query: 64  AVVANPSHLEAVDPVVQGKTRAEQ 87
           ++ ANPSHLEAVDPV++G  RA+Q
Sbjct: 239 SLTANPSHLEAVDPVLEGLVRAKQ 262

>pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Query: 9   GRLNVLANVCRKPLEQIFTQFAAL--EAADDGSGDVKYHLG---TYIERLNRVTNKNIRL 63
           GRLNVLAN+  KP  QIF++F      +   GSGDVKYHLG   TYI+      + +I +
Sbjct: 427 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFG---DNDIEV 483
Query: 64  AVVANPSHLEAVDPVVQGKTRAEQ 87
           ++ ANPSHLEAVDPV++G  RA+Q
Sbjct: 484 SLTANPSHLEAVDPVLEGLVRAKQ 507

>pdb|2JGD|B Chain B, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVL NV  K  + +F +FA       G+GDVKYH+G       +     + LA+  N
Sbjct: 262 GRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG--FSSDFQTDGGLVHLALAFN 319
Query: 69  PSHLEAVDPVVQGKTRA 85
           PSHLE V PVV G  RA
Sbjct: 320 PSHLEIVSPVVIGSVRA 336

>pdb|2JGD|A Chain A, E. Coli 2-Oxoglutarate Dehydrogenase (E1o) Length = 933

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVL NV  K  + +F +FA       G+GDVKYH+G       +     + LA+  N
Sbjct: 262 GRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG--FSSDFQTDGGLVHLALAFN 319
Query: 69  PSHLEAVDPVVQGKTRA 85
           PSHLE V PVV G  RA
Sbjct: 320 PSHLEIVSPVVIGSVRA 336

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	127
2jgd_A	933	2-oxoglutarate dehydrogenase E1 component; flavopr	3e-45
2yic_A	868	2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9	8e-42
2xt6_A	1113	2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET	1e-41

>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Length = 933

 Score =  155 bits (394), Expect = 3e-45
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 9   GRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVAN 68
           GRLNVL NV  K  + +F +FA       G+GDVKYH+G   +   +     + LA+  N
Sbjct: 262 GRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDF--QTDGGLVHLALAFN 319

Query: 69  PSHLEAVDPVVQGKTRAEQFYRGDNEGKK 97
           PSHLE V PVV G  RA      +    K
Sbjct: 320 PSHLEIVSPVVIGSVRARLDRLDEPSSNK 348

>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Length = 868

 Score =  145 bits (368), Expect = 8e-42
 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 9   GRLNVLANVCRKPLEQIFTQFA--ALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
           GRLNVLAN+  KP  QIF++F      +   GSGDVKYHLG     +    + +I +++ 
Sbjct: 182 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLT 241

Query: 67  ANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYS 101
           ANPSHLEAVDPV++G  RA+Q      E       
Sbjct: 242 ANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRF 276

>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113

 Score =  145 bits (367), Expect = 1e-41
 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 9   GRLNVLANVCRKPLEQIFTQFA--ALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVV 66
           GRLNVLAN+  KP  QIF++F      +   GSGDVKYHLG     +    + +I +++ 
Sbjct: 427 GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLT 486

Query: 67  ANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKLEYS 101
           ANPSHLEAVDPV++G  RA+Q      E       
Sbjct: 487 ANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRF 521

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	127
2jgd_A	933	2-oxoglutarate dehydrogenase E1 component; flavopr	99.87
2yic_A	868	2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9	99.85
2xt6_A	1113	2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET	99.83
1qs0_A	407	2-oxoisovalerate dehydrogenase alpha-subunit; hete	98.41
2bfd_A	400	2-oxoisovalerate dehydrogenase alpha subunit; oxid	98.23
1umd_A	367	E1-alpha, 2-OXO acid dehydrogenase alpha subunit;	97.75
2ozl_A	365	PDHE1-A type I, pyruvate dehydrogenase E1 componen	97.3
1w85_A	368	Pyruvate dehydrogenase E1 component, alpha subunit	97.25

>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*

Probab=99.87  E-value=1.8e-22  Score=185.86  Aligned_cols=89  Identities=40%  Similarity=0.516  Sum_probs=78.2

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceee
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQ   80 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~   80 (127)
                      +|+||+||||+|+|+|++|+|+.+||+||.|+.....+.||||||+|++....+  .|+++++++++|||||+++.|+++
T Consensus       254 ~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~--~gg~~~l~l~~~~shlg~~~p~A~  331 (933)
T 2jgd_A          254 VVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQT--DGGLVHLALAFNPSHLEIVSPVVI  331 (933)
T ss_dssp             EEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEE--TTEEEEEEECCCCSSTTCHHHHHH
T ss_pred             EEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCccccccc--CCCceEEeecccCcccccccCHHH
Confidence            478999999999999999999999999998875443468999999999887653  477999999999999999999999


Q ss_pred             hhhhhhHhhcC
Q psy11220         81 GKTRAEQFYRG   91 (127)
Q Consensus        81 GkaRAkQd~~~   91 (127)
                      |.|+|+|+..+
T Consensus       332 G~A~A~~~~~~  342 (933)
T 2jgd_A          332 GSVRARLDRLD  342 (933)
T ss_dssp             HHHHHHHTTSS
T ss_pred             HHHHHHHhhcc
Confidence            99999998753

>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*

Probab=99.85  E-value=6.4e-22  Score=180.93  Aligned_cols=90  Identities=47%  Similarity=0.673  Sum_probs=72.6

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCC--CCCCCccccCceeeEEeeccCCc-eEEEEeecCCCcccccCc
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAAD--DGSGDVKYHLGTYIERLNRVTNK-NIRLAVVANPSHLEAVDP   77 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~--~~sGDVKYHLG~s~~~~~~~~gk-~i~lsL~~NPSHLEaVnP   77 (127)
                      +|+||+||||+|+|+|++|+|+.+||+||.|+....  .++||||||+|++....+ .+|+ .+++++++|||||+++.|
T Consensus       174 ~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~-~~g~~~v~l~l~~n~s~Lg~~~P  252 (868)
T 2yic_A          174 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQ-MFGDNDIEVSLTANPSHLEAVDP  252 (868)
T ss_dssp             EEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEEC-SSSSCEEEEEECCCCSSTTTTHH
T ss_pred             EEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccc-cCCCcceeeeecCCCcccccccc
Confidence            478999999999999999999999999998875432  368999999999887654 2245 899999999999999999


Q ss_pred             eeehhhhhhHhhcC
Q psy11220         78 VVQGKTRAEQFYRG   91 (127)
Q Consensus        78 Vv~GkaRAkQd~~~   91 (127)
                      +++|.++|.|+..+
T Consensus       253 ~A~G~A~A~k~~~~  266 (868)
T 2yic_A          253 VLEGLVRAKQDLLD  266 (868)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhcc
Confidence            99999999998754

>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}

Probab=99.83  E-value=3.8e-21  Score=179.43  Aligned_cols=90  Identities=47%  Similarity=0.673  Sum_probs=71.7

Q ss_pred             CeeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCC--CCCCCccccCceeeEEeeccCCc-eEEEEeecCCCcccccCc
Q psy11220          1 MVSFSILAGRLNVLANVCRKPLEQIFTQFAALEAAD--DGSGDVKYHLGTYIERLNRVTNK-NIRLAVVANPSHLEAVDP   77 (127)
Q Consensus         1 ~ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~--~~sGDVKYHLG~s~~~~~~~~gk-~i~lsL~~NPSHLEaVnP   77 (127)
                      +|+||+||||+|+|+|++|+|+.+||+||.|+....  .++||||||+|++....+ .+|+ .+++++++|||||+++.|
T Consensus       419 ~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~-~~g~~~v~l~l~~n~s~Lg~~~p  497 (1113)
T 2xt6_A          419 VVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQ-MFGDNDIEVSLTANPSHLEAVDP  497 (1113)
T ss_dssp             EEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEEC-SSSSCEEEEEECCCCSSTTTTHH
T ss_pred             EEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccc-cCCCcceeeeecCCCcccccccc
Confidence            478999999999999999999999999998875432  368999999999887653 2245 899999999999999999


Q ss_pred             eeehhhhhhHhhcC
Q psy11220         78 VVQGKTRAEQFYRG   91 (127)
Q Consensus        78 Vv~GkaRAkQd~~~   91 (127)
                      +++|.++|.|+...
T Consensus       498 ~A~G~A~A~k~~~~  511 (1113)
T 2xt6_A          498 VLEGLVRAKQDLLD  511 (1113)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999998753

>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A

Probab=98.41  E-value=1.3e-07  Score=79.99  Aligned_cols=70  Identities=13%  Similarity=0.069  Sum_probs=56.6

Q ss_pred             cCCchhhHHHHHhhCCCHHHHhHhhcCCCCCC-CCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeehhh
Q psy11220          5 SILAGRLNVLANVCRKPLEQIFTQFAALEAAD-DGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKT   83 (127)
Q Consensus         5 MaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~-~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~Gka   83 (127)
                      |+|||+.++|+  .++|+.+||++|.+..... .+. +++||++.. +           ..+.++++||.+..|+++|.+
T Consensus       130 ~~yR~~~~~l~--~g~~~~~i~~el~g~~~~~~~G~-g~~~h~~~~-~-----------~~~~~~~g~lG~~lp~AvGaA  194 (407)
T 1qs0_A          130 PTYRQQSILMA--RDVSLVEMICQLLSNERDPLKGR-QLPIMYSVR-E-----------AGFFTISGNLATQFVQAVGWA  194 (407)
T ss_dssp             CCSSCHHHHHH--TTCCHHHHHHHHHTCTTCTTTTC-SCTTCCCBG-G-----------GTBCCCCSSSSHHHHHHHHHH
T ss_pred             ecccchHHHHh--cCCCHHHHHHHHhCCCCCCCCCC-Cceeecchh-c-----------cCccccccccccchhHHHHHH
Confidence            99999999997  9999999999997754332 222 589999852 1           125678999999999999999


Q ss_pred             hhhHhh
Q psy11220         84 RAEQFY   89 (127)
Q Consensus        84 RAkQd~   89 (127)
                      .|.|..
T Consensus       195 ~A~k~~  200 (407)
T 1qs0_A          195 MASAIK  200 (407)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            999864

>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...

Probab=98.23  E-value=4.9e-07  Score=76.00  Aligned_cols=73  Identities=18%  Similarity=0.014  Sum_probs=56.8

Q ss_pred             eeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeeh
Q psy11220          2 VSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQG   81 (127)
Q Consensus         2 ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~G   81 (127)
                      |++ +|||+.  +.+..|+|+.++|.+|.+.......-.+++||++...      .      .+..+++||....|+++|
T Consensus       109 v~~-~yR~~~--~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~~------~------~~~~~~g~lG~~lp~AvG  173 (400)
T 2bfd_A          109 VFG-QAREAG--VLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKE------R------HFVTISSPLATQIPQAVG  173 (400)
T ss_dssp             EEC-CSCCHH--HHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTT------T------TBCCCCSSTTTHHHHHHH
T ss_pred             EEe-cCcCHH--HHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCcccc------c------CccccCccccccccHHHH
Confidence            555 899997  7778999999999999876443221225899998431      1      167899999999999999


Q ss_pred             hhhhhHhh
Q psy11220         82 KTRAEQFY   89 (127)
Q Consensus        82 kaRAkQd~   89 (127)
                      .+.|.+..
T Consensus       174 ~AlA~~~~  181 (400)
T 2bfd_A          174 AAYAAKRA  181 (400)
T ss_dssp             HHHHHHHH
T ss_pred             HHHhhhhh
Confidence            99999854

>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*

Probab=97.75  E-value=1.9e-05  Score=65.22  Aligned_cols=72  Identities=18%  Similarity=0.200  Sum_probs=55.9

Q ss_pred             cCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeehhhh
Q psy11220          5 SILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTR   84 (127)
Q Consensus         5 MaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~GkaR   84 (127)
                      ++||+  +.+....|+++.++|.+|.+........++.+||++....            .+.++++||.+..|+++|.+.
T Consensus        93 ~s~r~--~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~~------------~~~~~~g~lG~~l~~a~G~A~  158 (367)
T 1umd_A           93 PYYRD--HGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKAL------------NFFTVASPIASHVPPAAGAAI  158 (367)
T ss_dssp             CCTTT--HHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTT------------TBCCCCSSTTTTHHHHHHHHH
T ss_pred             eCcHH--HHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCccccc------------CcCCCCchhhhhhhHHHHHHH
Confidence            79996  9999999999999999997754332222345899974321            245599999999999999999


Q ss_pred             hhHhhc
Q psy11220         85 AEQFYR   90 (127)
Q Consensus        85 AkQd~~   90 (127)
                      |.+...
T Consensus       159 a~k~~~  164 (367)
T 1umd_A          159 SMKLLR  164 (367)
T ss_dssp             HHHHTT
T ss_pred             HHHHhC
Confidence            988653

>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*

Probab=97.30  E-value=0.00027  Score=58.89  Aligned_cols=66  Identities=11%  Similarity=0.108  Sum_probs=51.7

Q ss_pred             CCchhhHHHHHhhCCCHHHHhHhhcCCCCCC--CCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeehhh
Q psy11220          6 ILAGRLNVLANVCRKPLEQIFTQFAALEAAD--DGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKT   83 (127)
Q Consensus         6 aHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~--~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~Gka   83 (127)
                      .||  .+.+++++|+|+.+||+||.|.....  ...||  ||++. .             .+..+.+++-+..|+++|.+
T Consensus        92 ~yR--~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~--~H~~~-~-------------~~~~~~g~~G~~lp~A~G~A  153 (365)
T 2ozl_A           92 AYR--AHGFTFTRGLSVREILAELTGRKGGCAKGKGGS--MHMYA-K-------------NFYGGNGIVGAQVPLGAGIA  153 (365)
T ss_dssp             CSC--CHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCT--TCCCB-T-------------TBCCCCCSTTTHHHHHHHHH
T ss_pred             HHH--HHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCC--CCcCc-c-------------ccCCCcchhhhhhHHHHHHH
Confidence            588  79999999999999999998765432  23677  89842 1             12346688999999999999


Q ss_pred             hhhHhh
Q psy11220         84 RAEQFY   89 (127)
Q Consensus        84 RAkQd~   89 (127)
                      +|.+..
T Consensus       154 ~A~~~~  159 (365)
T 2ozl_A          154 LACKYN  159 (365)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            999864

>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*

Probab=97.25  E-value=6.4e-05  Score=62.52  Aligned_cols=64  Identities=11%  Similarity=-0.114  Sum_probs=49.8

Q ss_pred             eeccCCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeeh
Q psy11220          2 VSFSILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQG   81 (127)
Q Consensus         2 ViGMaHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~G   81 (127)
                      |++| ||  .+.+.+..|+|+..+|.+|.|...    .|+  +|               .+..+..|+|||.+..|+++|
T Consensus        98 v~~~-~R--~~~~~~~~G~~~~~~~~el~G~~~----G~~--~h---------------~~~~~~~~~g~lG~~lp~AvG  153 (368)
T 1w85_A           98 ILPG-YR--DVPQIIWHGLPLYQAFLFSRGHFH----GNQ--IP---------------EGVNVLPPQIIIGAQYIQAAG  153 (368)
T ss_dssp             EECC-SS--CHHHHHHTTCCHHHHHHHHHTCGG----GGC--CC---------------TTCCBCCCCCSTTHHHHHHHH
T ss_pred             EEec-ch--hHHHHHhcCCCHHHHHHHHCCCCC----CCC--CC---------------cccccCCCccccCccccHHHH
Confidence            6788 75  467889999999999999977542    011  23               123577899999999999999


Q ss_pred             hhhhhHhh
Q psy11220         82 KTRAEQFY   89 (127)
Q Consensus        82 kaRAkQd~   89 (127)
                      .+.|.+..
T Consensus       154 ~A~A~~~~  161 (368)
T 1w85_A          154 VALGLKMR  161 (368)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHhHhh
Confidence            99999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	127
d2ozla1	361	E1-beta subunit of pyruvate dehydrogenase (PP modu	82.81

>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Branched-chain alpha-keto acid dehydrogenase PP module
domain: E1-beta subunit of pyruvate dehydrogenase (PP module)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.81  E-value=0.54  Score=36.87  Aligned_cols=71  Identities=11%  Similarity=0.087  Sum_probs=50.0

Q ss_pred             CCchhhHHHHHhhCCCHHHHhHhhcCCCCCCCCCCCccccCceeeEEeeccCCceEEEEeecCCCcccccCceeehhhhh
Q psy11220          6 ILAGRLNVLANVCRKPLEQIFTQFAALEAADDGSGDVKYHLGTYIERLNRVTNKNIRLAVVANPSHLEAVDPVVQGKTRA   85 (127)
Q Consensus         6 aHRGRLNvL~Nvl~KP~~~iF~eF~~~~~~~~~sGDVKYHLG~s~~~~~~~~gk~i~lsL~~NPSHLEaVnPVv~GkaRA   85 (127)
                      .||++...|+  .|.|+..||+++-++......-+.--.|+..        .+      +..-.|++.+.-|++.|.|.|
T Consensus        88 ~yR~~~~~la--~G~~~~~~~ae~~gk~~g~~~G~~~~~h~~~--------~~------~~~~~~ivg~~~p~A~G~A~a  151 (361)
T d2ozla1          88 AYRAHGFTFT--RGLSVREILAELTGRKGGCAKGKGGSMHMYA--------KN------FYGGNGIVGAQVPLGAGIALA  151 (361)
T ss_dssp             CSCCHHHHHH--TTCCHHHHHHHHTTCTTSTTTTSSCTTCCCB--------TT------BCCCCCSTTTHHHHHHHHHHH
T ss_pred             cccchheeee--ecccchhhhhhccCCcccccccccccccccc--------cc------ccCccccccccchhHHHHHHH
Confidence            6999999998  5889999999997766443222223333321        01      234458899999999999999


Q ss_pred             hHhhcCC
Q psy11220         86 EQFYRGD   92 (127)
Q Consensus        86 kQd~~~d   92 (127)
                      .+....+
T Consensus       152 ~k~~~~~  158 (361)
T d2ozla1         152 CKYNGKD  158 (361)
T ss_dssp             HHHHTCC
T ss_pred             hhhccCC
Confidence            9986543