Psyllid ID: psy11261

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
Protein Sequence
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Secondary Structure (PSIPRED)
cccHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHccccccHHHHHHcccHHHHHHHHcccccccHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccHEEEccHHHHHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHEHcccHHHHHHHccHHHHHHHccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHc
Coil and Loop (DISEMBL)
mdkltfyalsspeklDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKyanieedtpsyhrryDFFISkfssmchdsdvELRMAGISGIQGIIRKTvsddladniwkshhldkrwisdggdlptrtipsLLYNmhhemtsdgsQMAETCLRELIGRaafghvkgvvgpvlnhldmhrlwppkdfaYQVFRILVFSVQSQYSYLIIESLL
Flexible Loop (DISEMBL)
mdkltfyalsspekldrIGDYLYEtasrdisrKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKShhldkrwisdggdlPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Low Complexity Region (SEG)
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAlnllqkkliqkllECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Disordered region (IsUnstruct)
*****FYAL****KLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEM*****QMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIE***
Disordered Region (DISOPRED)
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHD*DV***MAGISGIQGIIRKTVSDDLADNIWKSHHLDKRW********************************TCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Disordered Region (DISEMBL)
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Disordered Region (DISPRO)
*DKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	247	2.2.26 [Sep-21-2011]
Q6ZQ18	817	Protein EFR3 homolog B OS	yes	N/A	0.951	0.287	0.496	3e-73
Q9Y2G0	817	Protein EFR3 homolog B OS	yes	N/A	0.951	0.287	0.496	3e-73
Q8IGJ0	834	Protein EFR3 homolog cmp4	yes	N/A	0.951	0.281	0.494	1e-72
Q5SPP5	816	Protein EFR3 homolog B OS	yes	N/A	0.951	0.287	0.488	3e-72
Q8BG67	819	Protein EFR3 homolog A OS	no	N/A	0.951	0.286	0.468	2e-70
Q14156	821	Protein EFR3 homolog A OS	no	N/A	0.951	0.286	0.468	2e-70
Q641A2	819	Protein EFR3 homolog A OS	N/A	N/A	0.951	0.286	0.465	7e-67
Q620W3	859	Protein EFR3 homolog OS=C	N/A	N/A	0.995	0.286	0.422	1e-57
Q09263	859	Protein EFR3 homolog OS=C	yes	N/A	0.951	0.273	0.408	2e-57

>sp|Q6ZQ18|EFR3B_MOUSE Protein EFR3 homolog B OS=Mus musculus GN=Efr3b PE=1 SV=2

 Score =  275 bits (702), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 135/272 (49%), Positives = 186/272 (68%), Gaps = 37/272 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALS+PEKLDRIG YL E   RD+ R R  YV +++EA++Q+L++CH  ++NL 
Sbjct: 36  MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS-- 115
            +   K++ KLLE  +  LQIL T SFVK+ANIEEDTPSYHR YDFF+S+FS MCH S  
Sbjct: 96  VESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSSHD 155

Query: 116 DVEL----RMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           D+E+    RM+GI G+QG++RKTV+D+L  NIW   H+DK             +PSLL+N
Sbjct: 156 DLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDK------------IVPSLLFN 203

Query: 172 MHH----------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHR 215
           + H                +   + +++AE CLREL+GRAAFG++K  + PVL HLD H 
Sbjct: 204 LQHVEEAESRSPSPLQAPEKEKENPAELAERCLRELLGRAAFGNIKNAIKPVLIHLDNHS 263

Query: 216 LWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           LW PK FA + F+I+++S+Q Q+S+L+I+ LL
Sbjct: 264 LWEPKVFATRCFKIIMYSIQPQHSHLVIQQLL 295

Mus musculus (taxid: 10090)

>sp|Q9Y2G0|EFR3B_HUMAN Protein EFR3 homolog B OS=Homo sapiens GN=EFR3B PE=1 SV=2

 Score =  275 bits (702), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 135/272 (49%), Positives = 186/272 (68%), Gaps = 37/272 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALS+PEKLDRIG YL E   RD+ R R  YV +++EA++Q+L++CH  ++NL 
Sbjct: 36  MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS-- 115
            +   K++ KLLE  +  LQIL T SFVK+ANIEEDTPSYHR YDFF+S+FS MCH S  
Sbjct: 96  VESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSSHD 155

Query: 116 DVEL----RMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           D+E+    RM+GI G+QG++RKTV+D+L  NIW   H+DK             +PSLL+N
Sbjct: 156 DLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDK------------IVPSLLFN 203

Query: 172 MHHEMTSDG----------------SQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHR 215
           + H   ++                 +++AE CLREL+GRAAFG++K  + PVL HLD H 
Sbjct: 204 LQHVEEAESRSPSPLQAPEKEKESPAELAERCLRELLGRAAFGNIKNAIKPVLIHLDNHS 263

Query: 216 LWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           LW PK FA + F+I+++S+Q Q+S+L+I+ LL
Sbjct: 264 LWEPKVFAIRCFKIIMYSIQPQHSHLVIQQLL 295

Homo sapiens (taxid: 9606)

>sp|Q8IGJ0|EFR3_DROME Protein EFR3 homolog cmp44E OS=Drosophila melanogaster GN=stmA PE=2 SV=3

 Score =  272 bits (696), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/277 (49%), Positives = 185/277 (66%), Gaps = 42/277 (15%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHA-LNL 59
           M+KLTFY+LSSP+KLDRIG+YLY+ A++DI+RKR +   +++EAM+ +L +CHA   LNL
Sbjct: 62  MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKRYKLAEIAMEAMDLLLQACHAQTTLNL 121

Query: 60  LQK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD 116
             +   +++QKLLE     L+I+AT SFVK+ANI EDTPSYHRRYDFFISKFSSMCH   
Sbjct: 122 FVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSMCHSDA 181

Query: 117 V----ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNM 172
                 LR+AGI G+QG+IRKTVSDDL +NIW++ H++K             +PSLL+NM
Sbjct: 182 ASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEK------------IVPSLLFNM 229

Query: 173 H---------HEMTSDG-------------SQMAETCLRELIGRAAFGHVKGVVGPVLNH 210
                       + + G               +AE  LREL+GRA+FGH++ V+ P+L H
Sbjct: 230 QFCVNVMFVKKNLLASGDLTPVEDATNVTPPALAEEVLRELVGRASFGHIRSVLKPLLTH 289

Query: 211 LDMHRLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           LD H LW P  FA   FRI++ S+Q QYSY ++E+L+
Sbjct: 290 LDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLM 326

An essential gene required for embryogenesis; required for cell viability.

Drosophila melanogaster (taxid: 7227)

>sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=efr3b PE=3 SV=2

 Score =  271 bits (693), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 133/272 (48%), Positives = 186/272 (68%), Gaps = 37/272 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALS+PEKLDRIG YL E  SRD++R R  YV +++EA++Q+L++CH  ++NL 
Sbjct: 36  MEKLTFYALSAPEKLDRIGAYLSERLSRDVARHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH---- 113
            +   K+++KLLE  +  LQIL T SFVK+ANIEEDTPSYHR YDFF+S+FS MCH    
Sbjct: 96  VESFLKMVRKLLEADKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSGYE 155

Query: 114 DSDV--ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           D D+  ++RMAGI G+QG++RKTV+D+L  NIW   H+DK             +PSLL+N
Sbjct: 156 DPDIRTKIRMAGIKGLQGVVRKTVNDELQANIWDPQHMDK------------IVPSLLFN 203

Query: 172 MHHEMTSDG----------------SQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHR 215
           +     ++                 +++ E C REL+GRAA+G++K  V PVL HLD H 
Sbjct: 204 LQSGEGTESRSPSPLQASEKEKESPAELTERCFRELLGRAAYGNIKNAVTPVLMHLDNHS 263

Query: 216 LWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           LW  K FA + F+I+++S+QSQ+S+L+I+ LL
Sbjct: 264 LWEGKTFAVRCFKIIMYSIQSQHSHLVIQQLL 295

Danio rerio (taxid: 7955)

>sp|Q8BG67|EFR3A_MOUSE Protein EFR3 homolog A OS=Mus musculus GN=Efr3a PE=1 SV=1

 Score =  265 bits (678), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 184/273 (67%), Gaps = 38/273 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+ YVL+++EA++Q+L++CH+ ++   
Sbjct: 37  MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query: 61  QKK---LIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH---- 113
            +    ++ KLLE  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH    
Sbjct: 97  VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query: 114 DSDV--ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           D ++  E+R+AGI GIQG++RKTV+D+L   IW+  H+DK             +PSLL+N
Sbjct: 157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDK------------IVPSLLFN 204

Query: 172 MHH-----------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMH 214
           M                   +   + + +AE+C REL+GRA FG++   V PV  HLD H
Sbjct: 205 MQKIEEVDSRLGPPSSPSAADKEENPAVLAESCFRELLGRATFGNMNNAVRPVFAHLDHH 264

Query: 215 RLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           +LW P +FA   F+I+++S+Q+QYS+ +I+ +L
Sbjct: 265 KLWDPNEFAVHCFKIIMYSIQAQYSHHVIQEIL 297

Mus musculus (taxid: 10090)

>sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A OS=Homo sapiens GN=EFR3A PE=1 SV=2

 Score =  265 bits (677), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 128/273 (46%), Positives = 183/273 (67%), Gaps = 38/273 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+ YVL+++EA++Q+L++CH+ ++   
Sbjct: 37  MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query: 61  QKK---LIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH---- 113
            +    ++ KLLE  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH    
Sbjct: 97  VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query: 114 DSDV--ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           D ++  E+R+AGI GIQG++RKTV+D+L   IW+  H+DK             +PSLL+N
Sbjct: 157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDK------------IVPSLLFN 204

Query: 172 MHH-----------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMH 214
           M                   +   + + +AE C REL+GRA FG++   V PV  HLD H
Sbjct: 205 MQKIEEVDSRIGPPSSPSATDKEENPAVLAENCFRELLGRATFGNMNNAVRPVFAHLDHH 264

Query: 215 RLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           +LW P +FA   F+I+++S+Q+QYS+ +I+ +L
Sbjct: 265 KLWDPNEFAVHCFKIIMYSIQAQYSHHVIQEIL 297

Homo sapiens (taxid: 9606)

>sp|Q641A2|EFR3A_XENLA Protein EFR3 homolog A OS=Xenopus laevis GN=efr3a PE=2 SV=1

 Score =  253 bits (647), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 127/273 (46%), Positives = 178/273 (65%), Gaps = 38/273 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R   V +++EA++Q+L++CH+ ++   
Sbjct: 37  MEKLTFYAVSAPEKLDRIGAYLAERLSRDVMRHRYGNVFIAMEALDQLLMACHSQSIKPF 96

Query: 61  QKK---LIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH---- 113
            +    ++ KLLE  E  LQI  T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH    
Sbjct: 97  VESFLHMVAKLLESGEPKLQIYGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHD 156

Query: 114 DSDV--ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           D +V  E+R+AGI GIQG++RKTV+D+L   IW+  H+DK             +PSLL+N
Sbjct: 157 DPEVRKEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDK------------IVPSLLFN 204

Query: 172 MHH-------------EMTSDGSQ----MAETCLRELIGRAAFGHVKGVVGPVLNHLDMH 214
           M                 T D  +    +AE C REL+GRA +G++   V PV  HLD H
Sbjct: 205 MQKIEDTDSRTGPPASPTTGDKEENPGILAENCFRELLGRATYGNMNNAVKPVFAHLDHH 264

Query: 215 RLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           +LW   +FA   F+I+++S+Q+QYS+ +I+ +L
Sbjct: 265 KLWESNEFAVSCFKIIMYSIQAQYSHHVIQQIL 297

Xenopus laevis (taxid: 8355)

>sp|Q620W3|EFR3_CAEBR Protein EFR3 homolog OS=Caenorhabditis briggsae GN=CBG02625 PE=3 SV=1

 Score =  223 bits (567), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/277 (42%), Positives = 173/277 (62%), Gaps = 31/277 (11%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M KLTFYA+S PEKL+RIG+YL     RD++R+R   V +++EAM+Q+L +CH+   +L 
Sbjct: 35  MQKLTFYAISHPEKLERIGEYLVMRMVRDLNRQRPVQVKIAVEAMDQLLQACHSSP-SLP 93

Query: 61  Q-----KKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS 115
           Q      +++Q+LLE +   ++ LAT SFV ++NIEE +PSYHR+YDFFI KFS MCH +
Sbjct: 94  QFSENHLRMVQRLLESNNAKMEQLATDSFVTFSNIEESSPSYHRQYDFFIDKFSQMCHAN 153

Query: 116 -------DVEL-RMAGISGIQGIIRKTVSDDLADNIWKSHHLDK---------RWISDGG 158
                  D  L R AG+ G++G++ K+V+DDL  NIW+  H+DK         +   D G
Sbjct: 154 PQAAYGEDFRLARCAGLRGLRGVVWKSVTDDLHPNIWEQQHMDKIVPSILFNLQEPDDNG 213

Query: 159 DLPTRTIPSLLYNMHHEMTSDGSQ-------MAETCLRELIGRAAFGHVKGVVGPVLNHL 211
              +  IP    N      S           +++ CLREL+G+A+FG ++ V+ PVL H+
Sbjct: 214 GFSSSHIPKFDNNFTDSTQSHRGDDEATPKVLSDRCLRELMGKASFGSLRAVIEPVLKHM 273

Query: 212 DMHRLW-PPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           D+H+ W PP  FA  VFR +++S+QSQ SY +I+ L+
Sbjct: 274 DLHKRWSPPPSFAIHVFRAIIYSIQSQNSYFVIQELI 310

Caenorhabditis briggsae (taxid: 6238)

>sp|Q09263|EFR3_CAEEL Protein EFR3 homolog OS=Caenorhabditis elegans GN=C32D5.3 PE=3 SV=1

 Score =  222 bits (566), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/289 (40%), Positives = 177/289 (61%), Gaps = 54/289 (18%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAH-ALNL 59
           M KLTFYA+S PEKL+RIG+YL     RD+SR+R   V +++EAM+Q+L +CH+  +L  
Sbjct: 35  MQKLTFYAISHPEKLERIGEYLVMRMVRDLSRQRPVQVKIAVEAMDQLLQACHSSPSLPQ 94

Query: 60  LQK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS- 115
             +   +++Q+LLE +   ++ LAT SFV ++NIEE +PSYHR+YDFFI KFS MCH + 
Sbjct: 95  FSENHLRMVQRLLESNNAKMEQLATDSFVTFSNIEESSPSYHRQYDFFIDKFSQMCHANP 154

Query: 116 ------DVEL-RMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSL 168
                 D  L R AG+ G++G++ K+V+DDL  NIW+  H+DK             +PS+
Sbjct: 155 QAAYGDDFRLARCAGLRGLRGVVWKSVTDDLHPNIWEQQHMDK------------IVPSI 202

Query: 169 LYNMHHEMTS-----------------DGSQ------------MAETCLRELIGRAAFGH 199
           L+N+     S                 D +Q            +++ CLREL+G+A+FG 
Sbjct: 203 LFNLQEPDDSGKGFSSSQIPKFDNTFADSTQSHRVDDEATPKVLSDRCLRELMGKASFGS 262

Query: 200 VKGVVGPVLNHLDMHRLW-PPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           ++ V+ PVL H+D+H+ W PP  FA  VFR +++S+QSQ SY +I+ L+
Sbjct: 263 LRAVIEPVLKHMDLHKRWTPPPSFAIHVFRAIIYSIQSQNSYFVIQELI 311

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
328704139	793	PREDICTED: protein EFR3 homolog cmp44E-l	0.951	0.296	0.575	3e-87
328704137	820	PREDICTED: protein EFR3 homolog cmp44E-l	0.951	0.286	0.575	3e-87
270009741	818	hypothetical protein TcasGA2_TC009038 [T	0.951	0.287	0.555	2e-83
189239274	1494	PREDICTED: similar to conserved hypothet	0.951	0.157	0.555	3e-83
345494907	798	PREDICTED: protein EFR3 homolog cmp44E-l	0.951	0.294	0.557	4e-82
156555215	823	PREDICTED: protein EFR3 homolog cmp44E-l	0.951	0.285	0.557	5e-82
307197018	795	Protein EFR3-like protein cmp44E [Harpeg	0.951	0.295	0.542	3e-81
332020343	836	Protein EFR3-like protein cmp44E [Acromy	0.951	0.281	0.542	4e-81
321472336	825	hypothetical protein DAPPUDRAFT_315767 [	0.951	0.284	0.551	6e-81
340728867	798	PREDICTED: protein EFR3 homolog cmp44E-l	0.951	0.294	0.538	2e-80

>gi|328704139|ref|XP_001947633.2| PREDICTED: protein EFR3 homolog cmp44E-like isoform 1 [Acyrthosiphon pisum]

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/273 (57%), Positives = 201/273 (73%), Gaps = 38/273 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALSSPEKLDRIG+YL++ ASRDISRKR ++V++++EAM+Q+L++CHA  LNL 
Sbjct: 34  MEKLTFYALSSPEKLDRIGEYLFQKASRDISRKRNEFVMIAMEAMDQLLVACHAQTLNLF 93

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV 117
            +   +++QKLLE  E  LQILATQSFV+++NIEEDTPSYHRRYDFF+SKFSSMCH+++ 
Sbjct: 94  VESYLRIVQKLLESSEPSLQILATQSFVRFSNIEEDTPSYHRRYDFFVSKFSSMCHNNNP 153

Query: 118 EL------RMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
            L      RMAGI GIQG+IRKTVSDDL +NIW+  H+DK             +PSLL+N
Sbjct: 154 NLVTMEMIRMAGIKGIQGVIRKTVSDDLVENIWEPVHMDK------------IVPSLLFN 201

Query: 172 MHHEMT-----------------SDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMH 214
           MH   +                 +D   +AE+CLRELIGRA+FGHVK V+ PVL HLD H
Sbjct: 202 MHTMKSKTDIVVESGISEEVNDKTDSFSLAESCLRELIGRASFGHVKSVIRPVLKHLDAH 261

Query: 215 RLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
            +W P  FA Q FRIL+FS+QSQYSY ++E+L+
Sbjct: 262 HMWVPNVFATQCFRILMFSIQSQYSYAVVETLM 294

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328704137|ref|XP_003242414.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Acyrthosiphon pisum]

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/273 (57%), Positives = 201/273 (73%), Gaps = 38/273 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALSSPEKLDRIG+YL++ ASRDISRKR ++V++++EAM+Q+L++CHA  LNL 
Sbjct: 61  MEKLTFYALSSPEKLDRIGEYLFQKASRDISRKRNEFVMIAMEAMDQLLVACHAQTLNLF 120

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV 117
            +   +++QKLLE  E  LQILATQSFV+++NIEEDTPSYHRRYDFF+SKFSSMCH+++ 
Sbjct: 121 VESYLRIVQKLLESSEPSLQILATQSFVRFSNIEEDTPSYHRRYDFFVSKFSSMCHNNNP 180

Query: 118 EL------RMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
            L      RMAGI GIQG+IRKTVSDDL +NIW+  H+DK             +PSLL+N
Sbjct: 181 NLVTMEMIRMAGIKGIQGVIRKTVSDDLVENIWEPVHMDK------------IVPSLLFN 228

Query: 172 MHHEMT-----------------SDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMH 214
           MH   +                 +D   +AE+CLRELIGRA+FGHVK V+ PVL HLD H
Sbjct: 229 MHTMKSKTDIVVESGISEEVNDKTDSFSLAESCLRELIGRASFGHVKSVIRPVLKHLDAH 288

Query: 215 RLWPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
            +W P  FA Q FRIL+FS+QSQYSY ++E+L+
Sbjct: 289 HMWVPNVFATQCFRILMFSIQSQYSYAVVETLM 321

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270009741|gb|EFA06189.1| hypothetical protein TcasGA2_TC009038 [Tribolium castaneum]

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/270 (55%), Positives = 201/270 (74%), Gaps = 35/270 (12%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALSSPEKLDRIG+Y+Y+ A+RDI R+R  +V++++EAM+Q+LL+CHA ALNL 
Sbjct: 62  MEKLTFYALSSPEKLDRIGEYMYQRAARDIYRRRYGFVIIAMEAMDQLLLACHAPALNLF 121

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV 117
            +   K++QKLLE  E  LQILATQSFVK+ANIEEDTPSYHRRYDFF+SKFS+MCH S+ 
Sbjct: 122 VESFLKMVQKLLESTEPELQILATQSFVKFANIEEDTPSYHRRYDFFVSKFSAMCHSSEG 181

Query: 118 -ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHH-- 174
            ++R+AGI G+Q ++RKTVSDDL +NIW+  H+DK             +PSLL+NM +  
Sbjct: 182 DQIRIAGIKGLQAVVRKTVSDDLVENIWEPVHMDK------------IVPSLLFNMQNAR 229

Query: 175 -----------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKD-- 221
                      E  +D   +AETCLREL+GRA+FGH++ V+ PVL H D+H+LW P+D  
Sbjct: 230 FLNNEAKEVIPEDQTDPPMLAETCLRELVGRASFGHIRAVLKPVLKHFDLHKLWAPEDNP 289

Query: 222 ----FAYQVFRILVFSVQSQYSYLIIESLL 247
               FA   FRI++FS+Q+QYSY ++E+L+
Sbjct: 290 NNNEFAIHTFRIIMFSIQAQYSYTVVETLV 319

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239274|ref|XP_969642.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/270 (55%), Positives = 201/270 (74%), Gaps = 35/270 (12%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFYALSSPEKLDRIG+Y+Y+ A+RDI R+R  +V++++EAM+Q+LL+CHA ALNL 
Sbjct: 62  MEKLTFYALSSPEKLDRIGEYMYQRAARDIYRRRYGFVIIAMEAMDQLLLACHAPALNLF 121

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV 117
            +   K++QKLLE  E  LQILATQSFVK+ANIEEDTPSYHRRYDFF+SKFS+MCH S+ 
Sbjct: 122 VESFLKMVQKLLESTEPELQILATQSFVKFANIEEDTPSYHRRYDFFVSKFSAMCHSSEG 181

Query: 118 -ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHH-- 174
            ++R+AGI G+Q ++RKTVSDDL +NIW+  H+DK             +PSLL+NM +  
Sbjct: 182 DQIRIAGIKGLQAVVRKTVSDDLVENIWEPVHMDK------------IVPSLLFNMQNAR 229

Query: 175 -----------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKD-- 221
                      E  +D   +AETCLREL+GRA+FGH++ V+ PVL H D+H+LW P+D  
Sbjct: 230 FLNNEAKEVIPEDQTDPPMLAETCLRELVGRASFGHIRAVLKPVLKHFDLHKLWAPEDNP 289

Query: 222 ----FAYQVFRILVFSVQSQYSYLIIESLL 247
               FA   FRI++FS+Q+QYSY ++E+L+
Sbjct: 290 NNNEFAIHTFRIIMFSIQAQYSYTVVETLV 319

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494907|ref|XP_003427397.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Nasonia vitripennis]

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 151/271 (55%), Positives = 197/271 (72%), Gaps = 36/271 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KL FY+LSSPEKLDRIG+YL++ ASRDISR+R  +V++++EAM+Q+L +CHA  LNL 
Sbjct: 36  MEKLMFYSLSSPEKLDRIGEYLFQRASRDISRRRNGFVVIAMEAMDQLLAACHAQTLNLF 95

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH---- 113
            +   K++QKLLE  +  LQILATQSFV++ANIEEDTPSYH RYDFF+SK+SSMCH    
Sbjct: 96  VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSSMCHSNND 155

Query: 114 DSDV--ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           DS V  ++R+AGI G+QG++RKTVSDDL +NIW   H+DK             +PSLLYN
Sbjct: 156 DSTVRKQIRLAGIQGLQGVVRKTVSDDLVENIWNMVHMDK------------IVPSLLYN 203

Query: 172 MHH---------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRL 216
           M +               E  SD  Q AETC+REL+GRA+FGH++ V+ PVL HLD H+L
Sbjct: 204 MQNARYSNKENATPESPTEERSDPPQFAETCMRELVGRASFGHIRCVIKPVLKHLDNHQL 263

Query: 217 WPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           W P  FA   FRI++FS+QSQYSY ++E+L+
Sbjct: 264 WVPNYFAIHTFRIIMFSIQSQYSYTVVEALM 294

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555215|ref|XP_001599882.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 1 [Nasonia vitripennis]

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 151/271 (55%), Positives = 197/271 (72%), Gaps = 36/271 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KL FY+LSSPEKLDRIG+YL++ ASRDISR+R  +V++++EAM+Q+L +CHA  LNL 
Sbjct: 61  MEKLMFYSLSSPEKLDRIGEYLFQRASRDISRRRNGFVVIAMEAMDQLLAACHAQTLNLF 120

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH---- 113
            +   K++QKLLE  +  LQILATQSFV++ANIEEDTPSYH RYDFF+SK+SSMCH    
Sbjct: 121 VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSSMCHSNND 180

Query: 114 DSDV--ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           DS V  ++R+AGI G+QG++RKTVSDDL +NIW   H+DK             +PSLLYN
Sbjct: 181 DSTVRKQIRLAGIQGLQGVVRKTVSDDLVENIWNMVHMDK------------IVPSLLYN 228

Query: 172 MHH---------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRL 216
           M +               E  SD  Q AETC+REL+GRA+FGH++ V+ PVL HLD H+L
Sbjct: 229 MQNARYSNKENATPESPTEERSDPPQFAETCMRELVGRASFGHIRCVIKPVLKHLDNHQL 288

Query: 217 WPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           W P  FA   FRI++FS+QSQYSY ++E+L+
Sbjct: 289 WVPNYFAIHTFRIIMFSIQSQYSYTVVEALM 319

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197018|gb|EFN78390.1| Protein EFR3-like protein cmp44E [Harpegnathos saltator]

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 147/271 (54%), Positives = 198/271 (73%), Gaps = 36/271 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFY+LSSPEKLDRIG+YL++ ASRDI R+R  +V++++EAM+Q+L++CHA  LNL 
Sbjct: 33  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 92

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD- 116
            +   K++QKLLE  +  LQILATQSFV++ANIEEDTPSYH RYDFF+SK+S+MCH ++ 
Sbjct: 93  IESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSAMCHSNND 152

Query: 117 -----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
                 ++R+AGI G+QG++RKT+SDDL +NIW+  H+DK             +PSLLYN
Sbjct: 153 DPAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDK------------IVPSLLYN 200

Query: 172 MHH---------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRL 216
           M +               E  SD  Q AETC+RELIGRA+FGH++ V+ PVL HLD H+L
Sbjct: 201 MQNSRYADKEQATPDSPTEERSDPPQFAETCMRELIGRASFGHIRCVIRPVLRHLDNHQL 260

Query: 217 WPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           W P  FA   FRI++FS+QSQYSY ++E+L+
Sbjct: 261 WVPNYFAIHTFRIIMFSIQSQYSYTVVEALM 291

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020343|gb|EGI60765.1| Protein EFR3-like protein cmp44E [Acromyrmex echinatior]

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/271 (54%), Positives = 197/271 (72%), Gaps = 36/271 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFY+LSSPEKLDRIG+YL++ ASRDI R+R  +V++++EAM+Q+L++CHA  LNL 
Sbjct: 75  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 134

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD- 116
            +   K++QKLLE  +  LQILATQSFV++ANIEEDTPSYH RYDFF+SK+S+MCH ++ 
Sbjct: 135 VESFLKMVQKLLESTDPQLQILATQSFVRFANIEEDTPSYHTRYDFFVSKYSAMCHSNND 194

Query: 117 -----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
                 ++R+AGI G+QG++RKT+SDDL +NIW+  H+DK             +PSLLYN
Sbjct: 195 DPTTRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDK------------IVPSLLYN 242

Query: 172 MHH---------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRL 216
           M +               E  SD  Q AETC+RELIGRA+FGH++ V+ PVL HLD H L
Sbjct: 243 MQNSRYADKEDTTPDSPTEERSDPPQFAETCMRELIGRASFGHIRCVIRPVLRHLDNHHL 302

Query: 217 WPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           W P  FA   FRI++FS+QSQYSY ++E+L+
Sbjct: 303 WVPNYFAIHTFRIIMFSIQSQYSYTVVEALM 333

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321472336|gb|EFX83306.1| hypothetical protein DAPPUDRAFT_315767 [Daphnia pulex]

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 149/270 (55%), Positives = 193/270 (71%), Gaps = 35/270 (12%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           MDKLTFY++SSPEKLDRIG+YL +  SRDI R R   V++++EAM+Q+LL+CHA +LNL 
Sbjct: 61  MDKLTFYSMSSPEKLDRIGEYLAQRVSRDIYRHRNPMVIIAMEAMDQLLLACHAQSLNLF 120

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV 117
            +   K +QKLLE  E  LQILA+QSFVK+ANIEEDTPSYHRRYDFF+SKF+S+CH +  
Sbjct: 121 VESFLKTVQKLLETTEPALQILASQSFVKFANIEEDTPSYHRRYDFFVSKFASLCHSNHP 180

Query: 118 E------LRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
           E      LR+AG+ GIQG++RKTVSDDL +NIW+  H+DK             IPSLLYN
Sbjct: 181 EVDVLNSLRLAGLRGIQGVVRKTVSDDLVENIWEPVHMDK------------IIPSLLYN 228

Query: 172 MHH------EMTS--------DGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLW 217
           M H      E T         D S +AE CLREL+GRA+FG+++ V+ PV  HLD+H LW
Sbjct: 229 MQHASGHPEEQTDSENGARNIDPSSLAENCLRELVGRASFGNIRSVIKPVFKHLDLHELW 288

Query: 218 PPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
            P DFA   FR++++S+Q QYSY ++E+L+
Sbjct: 289 VPNDFAIYTFRVIMYSIQVQYSYAVVENLM 318

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728867|ref|XP_003402734.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Bombus terrestris]

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/271 (53%), Positives = 197/271 (72%), Gaps = 36/271 (13%)

Query: 1   MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLL 60
           M+KLTFY+LSSPEKLDRIG+YL++ ASRDI R+R  +V++++EAM+Q+L++CHA  LNL 
Sbjct: 36  MEKLTFYSLSSPEKLDRIGEYLFQRASRDIYRRRNGFVVIAMEAMDQLLVACHAQTLNLF 95

Query: 61  QK---KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS-- 115
            +   K+IQKLLE  +  LQILATQSFV++ANIE+DTPSYH RYDFF+SK+S+MCH +  
Sbjct: 96  VESFLKMIQKLLESTDPQLQILATQSFVRFANIEQDTPSYHTRYDFFVSKYSAMCHSNHN 155

Query: 116 ----DVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
                 ++R+AGI G+QG++RKT+SDDL +NIW+  H+DK             +PSLLYN
Sbjct: 156 DHAIRKQIRLAGIQGLQGVVRKTLSDDLVENIWEPVHMDK------------IVPSLLYN 203

Query: 172 MHH---------------EMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRL 216
           M +               E  SD  Q AETC+REL+GRA+FGH++ V+ PVL HLD H+L
Sbjct: 204 MQNSRYSNKEDATPDSPTEERSDPPQFAETCMRELVGRASFGHIRCVIRPVLRHLDNHQL 263

Query: 217 WPPKDFAYQVFRILVFSVQSQYSYLIIESLL 247
           W P  FA   FRI++FS+QSQYSY ++E+L+
Sbjct: 264 WVPNYFAIHTFRIIMFSIQSQYSYTVVEALM 294

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
ZFIN|ZDB-GENE-040426-1681	687	efr3a "EFR3 homolog A (S. cere	0.951	0.342	0.484	2.4e-60
MGI|MGI:2444851	817	Efr3b "EFR3 homolog B (S. cere	0.991	0.299	0.488	8.1e-60
UNIPROTKB|E1BRM7	823	EFR3A "Uncharacterized protein	0.995	0.298	0.473	5.7e-59
UNIPROTKB|E2RCW6	821	EFR3A "Uncharacterized protein	0.995	0.299	0.473	5.7e-59
MGI|MGI:1923990	819	Efr3a "EFR3 homolog A (S. cere	1.0	0.301	0.475	5.7e-59
RGD|1305976	819	Efr3a "EFR3 homolog A (S. cere	1.0	0.301	0.475	5.7e-59
UNIPROTKB|Q14156	821	EFR3A "Protein EFR3 homolog A"	1.0	0.300	0.471	7.3e-59
WB|WBGene00016311	859	C32D5.3 [Caenorhabditis elegan	0.611	0.175	0.460	1.2e-49
FB|FBgn0086784	834	stmA "stambha A" [Drosophila m	0.692	0.205	0.513	2.3e-42
UNIPROTKB|F1RRT6	212	F1RRT6 "Uncharacterized protei	0.736	0.858	0.440	4.6e-41

ZFIN|ZDB-GENE-040426-1681 efr3a "EFR3 homolog A (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 127/262 (48%), Positives = 178/262 (67%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXX-- 58
             M+KLTFYA+S+PEKLDRIG YL E  +RD+ R R  YV++++EA++Q+L++CH+ +    
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLTRDVVRHRYGYVVIAMEALDQLLMACHSQSIKPF 96

Query:    59 -XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS-- 115
                         E  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH +  
Sbjct:    97 VESFLHMVAKLLESREPDLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSQFSAMCHSTHE 156

Query:   116 DVE----LRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN 171
             D E    +R+AGI G+QG++RKTV+D+L   IW+  H+DK             IPS+L+N
Sbjct:   157 DPETRSRIRVAGIKGLQGVVRKTVNDELQAIIWEPQHMDK------------LIPSMLFN 204

Query:   172 MHHEMTSD--GSQ----MAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQ 225
             M     S+  G +    +AE+C REL+GRAA+G++   V PVL HLD HRLW P DFA  
Sbjct:   205 MQDNEDSERAGEENPASLAESCFRELLGRAAYGNMNNAVRPVLVHLDNHRLWDPNDFAVS 264

Query:   226 VFRILVFSVQSQYSYLIIESLL 247
              FRI+++S+Q+Q+S+ +I+ +L
Sbjct:   265 CFRIIMYSIQAQHSHHVIQQVL 286

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:2444851 Efr3b "EFR3 homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 128/262 (48%), Positives = 175/262 (66%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXXXX 60
             M+KLTFYALS+PEKLDRIG YL E   RD+ R R  YV +++EA++Q+L++CH  +    
Sbjct:    36 MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHRYGYVCIAMEALDQLLMACHCQSINLF 95

Query:    61 XXXXXXXXX---ECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS-- 115
                         E  +  LQIL T SFVK+ANIEEDTPSYHR YDFF+S+FS MCH S  
Sbjct:    96 VESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMCHSSHD 155

Query:   116 DVEL----RMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRW------ISDGGDLPTRTI 165
             D+E+    RM+GI G+QG++RKTV+D+L  NIW   H+DK        +    +  +R+ 
Sbjct:   156 DLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDKIVPSLLFNLQHVEEAESRS- 214

Query:   166 PSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQ 225
             PS L     E  +  +++AE CLREL+GRAAFG++K  + PVL HLD H LW PK FA +
Sbjct:   215 PSPLQAPEKEKENP-AELAERCLRELLGRAAFGNIKNAIKPVLIHLDNHSLWEPKVFATR 273

Query:   226 VFRILVFSVQSQYSYLIIESLL 247
              F+I+++S+Q Q+S+L+I+ LL
Sbjct:   274 CFKIIMYSIQPQHSHLVIQQLL 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BRM7 EFR3A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 124/262 (47%), Positives = 172/262 (65%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXX-- 58
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R  YVL+++EA++Q+L++CH+ +    
Sbjct:    38 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRYGYVLIAMEALDQLLMACHSQSIKPF 97

Query:    59 -XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD- 116
                         E  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH  D 
Sbjct:    98 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCDH 157

Query:   117 -----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWIS------DGGDLPTRTI 165
                   E+R+AGI GIQG++RKTV+D+L   IW+  H+DK   S         D+ +RT 
Sbjct:   158 DPETQTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEDVDSRTG 217

Query:   166 PSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQ 225
             P        E   + + +AE C REL+GRA +G++   V PV  HLD H+LW P +FA  
Sbjct:   218 PPSSPT-GGEKEENPALLAENCFRELLGRATYGNMNNAVRPVFAHLDHHKLWDPNEFAVS 276

Query:   226 VFRILVFSVQSQYSYLIIESLL 247
              F+I+++S+Q+QYS+ +I+ +L
Sbjct:   277 CFKIIMYSIQAQYSHHVIQEIL 298

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|E2RCW6 EFR3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 124/262 (47%), Positives = 175/262 (66%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXX-- 58
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+ YVL+++EA++Q+L++CH+ +    
Sbjct:    37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    59 -XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHD--S 115
                         E  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH   S
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   116 D----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWIS------DGGDLPTRTI 165
             D     E+R+AGI GIQG++RKTV+D+L   IW+  H+DK   S         ++ +RT 
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRTG 216

Query:   166 PSLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQ 225
             P    +   +   + + +AE C REL+GRA FG++   V PV  HLD H+LW P +FA  
Sbjct:   217 PPPSPSAT-DKEENPAVLAENCFRELLGRATFGNMNNAVRPVFAHLDHHKLWDPNEFAVH 275

Query:   226 VFRILVFSVQSQYSYLIIESLL 247
              F+I+++S+Q+QYS+ +I+ +L
Sbjct:   276 CFKIIMYSIQAQYSHHVIQEIL 297

GO:0005886 "plasma membrane" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:1923990 Efr3a "EFR3 homolog A (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 124/261 (47%), Positives = 174/261 (66%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXX-- 58
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+ YVL+++EA++Q+L++CH+ +    
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    59 -XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHD--S 115
                         E  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH   S
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   116 D----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPT-RTIPSLLY 170
             D     E+R+AGI GIQG++RKTV+D+L   IW+  H+DK   S   ++     + S L 
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRLG 216

Query:   171 NMHHEMTSDGSQ----MAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQV 226
                    +D  +    +AE+C REL+GRA FG++   V PV  HLD H+LW P +FA   
Sbjct:   217 PPSSPSAADKEENPAVLAESCFRELLGRATFGNMNNAVRPVFAHLDHHKLWDPNEFAVHC 276

Query:   227 FRILVFSVQSQYSYLIIESLL 247
             F+I+++S+Q+QYS+ +I+ +L
Sbjct:   277 FKIIMYSIQAQYSHHVIQEIL 297

GO:0001533 "cornified envelope" evidence=ISO

GO:0005622 "intracellular" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

RGD|1305976 Efr3a "EFR3 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 124/261 (47%), Positives = 174/261 (66%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXX-- 58
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+ YVL+++EA++Q+L++CH+ +    
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    59 -XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHD--S 115
                         E  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH   S
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   116 D----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPT-RTIPSLLY 170
             D     E+R+AGI GIQG++RKTV+D+L   IW+  H+DK   S   ++     + S L 
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRLG 216

Query:   171 NMHHEMTSDGSQ----MAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQV 226
                    +D  +    +AE+C REL+GRA FG++   V PV  HLD H+LW P +FA   
Sbjct:   217 PPSSPSAADKEENPAVLAESCFRELLGRATFGNMNNAVRPVFAHLDHHKLWDPNEFAVHC 276

Query:   227 FRILVFSVQSQYSYLIIESLL 247
             F+I+++S+Q+QYS+ +I+ +L
Sbjct:   277 FKIIMYSIQAQYSHHVIQEIL 297

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q14156 EFR3A "Protein EFR3 homolog A" [Homo sapiens (taxid:9606)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 123/261 (47%), Positives = 173/261 (66%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAXX-- 58
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+ YVL+++EA++Q+L++CH+ +    
Sbjct:    37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPF 96

Query:    59 -XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHD--S 115
                         E  E  LQ+L T SFVK+ANIEEDTPSYHRRYDFF+S+FS+MCH   S
Sbjct:    97 VESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHS 156

Query:   116 D----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPT-RTIPSLLY 170
             D     E+R+AGI GIQG++RKTV+D+L   IW+  H+DK   S   ++     + S + 
Sbjct:   157 DPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRIG 216

Query:   171 NMHHEMTSDGSQ----MAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQV 226
                    +D  +    +AE C REL+GRA FG++   V PV  HLD H+LW P +FA   
Sbjct:   217 PPSSPSATDKEENPAVLAENCFRELLGRATFGNMNNAVRPVFAHLDHHKLWDPNEFAVHC 276

Query:   227 FRILVFSVQSQYSYLIIESLL 247
             F+I+++S+Q+QYS+ +I+ +L
Sbjct:   277 FKIIMYSIQAQYSHHVIQEIL 297

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

WB|WBGene00016311 C32D5.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 358 (131.1 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
 Identities = 75/163 (46%), Positives = 104/163 (63%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHAX--- 57
             M KLTFYA+S PEKL+RIG+YL     RD+SR+R   V +++EAM+Q+L +CH+      
Sbjct:    35 MQKLTFYAISHPEKLERIGEYLVMRMVRDLSRQRPVQVKIAVEAMDQLLQACHSSPSLPQ 94

Query:    58 -XXXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS- 115
                          E +   ++ LAT SFV ++NIEE +PSYHR+YDFFI KFS MCH + 
Sbjct:    95 FSENHLRMVQRLLESNNAKMEQLATDSFVTFSNIEESSPSYHRQYDFFIDKFSQMCHANP 154

Query:   116 ------DVEL-RMAGISGIQGIIRKTVSDDLADNIWKSHHLDK 151
                   D  L R AG+ G++G++ K+V+DDL  NIW+  H+DK
Sbjct:   155 QAAYGDDFRLARCAGLRGLRGVVWKSVTDDLHPNIWEQQHMDK 197

GO:0000003 "reproduction" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

FB|FBgn0086784 stmA "stambha A" [Drosophila melanogaster (taxid:7227)]

 Score = 456 (165.6 bits), Expect = 2.3e-42, P = 2.3e-42
 Identities = 96/187 (51%), Positives = 129/187 (68%)

Query:    76 LQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV-----ELRMAGISGIQGI 130
             L+I+AT SFVK+ANI EDTPSYHRRYDFFISKFSSMCH SD       LR+AGI G+QG+
Sbjct:   141 LKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSMCH-SDAASMRDSLRLAGIKGLQGV 199

Query:   131 IRKTVSDDLADNIWKSHHLDKRWISDGGDLP-TRTIPSLLYNM--HHEMT--SDGSQ--- 182
             IRKTVSDDL +NIW++ H++K   S   ++     +  +  N+    ++T   D +    
Sbjct:   200 IRKTVSDDLVENIWEAEHMEKIVPSLLFNMQFCVNVMFVKKNLLASGDLTPVEDATNVTP 259

Query:   183 --MAETCLRELIGRAAFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQSQYSY 240
               +AE  LREL+GRA+FGH++ V+ P+L HLD H LW P  FA   FRI++ S+Q QYSY
Sbjct:   260 PALAEEVLRELVGRASFGHIRSVLKPLLTHLDRHELWVPNTFAIHTFRIVMISIQPQYSY 319

Query:   241 LIIESLL 247
              ++E+L+
Sbjct:   320 TVVETLM 326

GO:0005886 "plasma membrane" evidence=NAS

GO:0000910 "cytokinesis" evidence=IMP

GO:0007602 "phototransduction" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0016079 "synaptic vesicle exocytosis" evidence=IMP

GO:0048488 "synaptic vesicle endocytosis" evidence=IDA;IMP

GO:0045202 "synapse" evidence=IDA

GO:0030100 "regulation of endocytosis" evidence=IMP

UNIPROTKB|F1RRT6 F1RRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 97/220 (44%), Positives = 133/220 (60%)

Query:    42 LEAMNQILLSCHAHAXX---XXXXXXXXXXXECHEHVLQILATQSFVKYANIEEDTPSYH 98
             +EA++Q+L++CH+ +                E  E  LQ+L T SFVK+ANIEEDTPSYH
Sbjct:     1 MEALDQLLMACHSQSIKPFVESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYH 60

Query:    99 RRYDFFISKFSSMCHD--SD----VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKR 152
             RRYDFF+S+FS+MCH   SD     E+R+AGI GIQG++RKTV+D+L   IW+  H+DK 
Sbjct:    61 RRYDFFVSRFSAMCHSCHSDPETRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDK- 119

Query:   153 WISDGGDLPTRTIPSLLYNMH--HEMTS-----------DGSQ----MAETCLRELIGRA 195
                         +PSLL+NM    E+ S           D  +    +AE C REL+GRA
Sbjct:   120 -----------IVPSLLFNMQKIEEVDSRIGPPPSPSAADKEENPAVLAENCFRELLGRA 168

Query:   196 AFGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSVQ 235
              FG++   V PV  HLD H+LW P +FA   F+I+++S+Q
Sbjct:   169 TFGNMNNAVRPVFAHLDHHKLWDPNEFAVHCFKIIMYSIQ 208

GO:0005886 "plasma membrane" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	247
KOG1877|consensus	819		100.0
PF12755	97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	83.34
PF12755	97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	83.14

>KOG1877|consensus

Probab=100.00  E-value=4.6e-69  Score=537.12  Aligned_cols=234  Identities=50%  Similarity=0.917  Sum_probs=224.3

Q ss_pred             CcchhhhhccCCCchhhhHHHHHHHHHHHHhhcCCCceeeHHHHHHHHHHhccccchhhhHH---HHHHHHHhcCCcchh
Q psy11261          1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQK---KLIQKLLECHEHVLQ   77 (247)
Q Consensus         1 ~skL~yYa~s~p~KL~KIg~yLekR~~kdl~r~r~g~V~V~l~i~~kLl~~C~~q~l~LFa~---~ii~~lL~s~~~~l~   77 (247)
                      |+||||||+|||+||||||.||++||+||+||+|+|+|+|+|+||++||.+||+| +|+||+   +||++||++++++|+
T Consensus        36 m~kL~~YAasnp~KL~KI~~yL~~R~~kdl~~~r~~~v~Iamea~~kLL~~C~eq-~n~F~ssfL~mv~~LLes~~~~~~  114 (819)
T KOG1877|consen   36 MEKLTFYAASNPSKLPKIGTYLEERCYKDLRRERFGSVKIAMEAYDKLLQACKEQ-INLFVSSFLRMVQKLLESNNDEMQ  114 (819)
T ss_pred             HHHHHHHHhhChhhhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhcCCCcee
Confidence            7899999999999999999999999999999999999999999999999999998 999999   999999999999999


Q ss_pred             hHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcch-----hHHhhchhhhhhhHhhccccccchhhcccccccch
Q psy11261         78 ILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV-----ELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKR  152 (247)
Q Consensus        78 i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~-----~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~  152 (247)
                      ++||++|++|++|++|+|+||++|++||++||+||++.++     .+|+||||||+||||+++.|++.++||+.+|||+ 
T Consensus       115 ilg~~sf~~F~~i~~d~~sy~~~yd~Fi~kf~~l~he~~~~~~~~~lr~agl~gLsa~v~~tv~d~l~~ti~e~~h~d~-  193 (819)
T KOG1877|consen  115 ILGTNSFVKFANIEEDGPSYHRNYDFFISKFSSLCHERGDDDMKDCLRAAGLQGLSAVVWLTVSDHLAATIWEPQHMDK-  193 (819)
T ss_pred             eehhhHHHHHHhhcccCchhhhhhHHHHHHHHHHhhcccchhhhhhccHhhhhhHHHHHHHHHhhhhhhhhhhhhhhcc-
Confidence            9999999999999999999999999999999999999654     8999999999999999999999999999999999 


Q ss_pred             hhccCCCCCCccccccccccccCCC----------------------CChHHHHHHHHHHHHccccc-cccchhhhhhhh
Q psy11261        153 WISDGGDLPTRTIPSLLYNMHHEMT----------------------SDGSQMAETCLRELIGRAAF-GHVKGVVGPVLN  209 (247)
Q Consensus       153 ~v~~~~~~~~~ivPslL~n~~~~~~----------------------~~p~~~a~~CL~~l~~~a~~-ttir~vl~p~~~  209 (247)
                                 |||++++|++..+.                      .+|++||++|+|+|+++|++ ||||.+|+|+|.
T Consensus       194 -----------ivpsl~~~l~~~e~~~~~~S~s~~~~~~~~~a~~~~~~p~vla~~cl~~l~~~A~~g~~iR~~l~pl~~  262 (819)
T KOG1877|consen  194 -----------IVPSLLFELQSIENLGKRESDSRIRTFSLLAAGDKTSDPKVLAERCLRELLGRAKFGTNIRNALKPLLS  262 (819)
T ss_pred             -----------chhhHHHhhcchhhcccccCcccccCccccccCCcccCcchhHHHHHHHhhccccccchHHHHHHHHHh
Confidence                       99999999986551                      35999999999999999975 499999999999


Q ss_pred             hccCCCCCCCh-hhHHHHHHHHHHHhhcccceeeecccC
Q psy11261        210 HLDMHRLWPPK-DFAYQVFRILVFSVQSQYSYLIIESLL  247 (247)
Q Consensus       210 ~~D~~~~W~~~-~~A~~~~~~~~~s~~~Q~~~~v~~~L~  247 (247)
                      |||.|.+|.|+ +||++||+++|+++|+|++|+|+++|+
T Consensus       263 ~~d~h~~w~p~n~fav~~~~~vi~~iq~q~s~~v~~~li  301 (819)
T KOG1877|consen  263 HLDFHELWTPPNGFAVHVFKIVIYLIQRQYSYFVIQELI  301 (819)
T ss_pred             ccccceeecCCCccchHHHHHHHHHHhhccchHHHHHHH
Confidence            99999999998 999999999999999999999998764

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region

Probab=83.34  E-value=0.37  Score=37.52  Aligned_cols=75  Identities=19%  Similarity=0.166  Sum_probs=51.2

Q ss_pred             HHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCccccccccccccCCCCChHHHHHHHHHHHHcccccc
Q psy11261        119 LRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAAFG  198 (247)
Q Consensus       119 ~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~~~~p~~~a~~CL~~l~~~a~~t  198 (247)
                      -|.+||-||+++.-..+++     +  .+++++            |+|++|..+.+.+ ....+.|=.||.++++.+...
T Consensus         2 ~R~ggli~Laa~ai~l~~~-----~--~~~l~~------------Il~pVL~~~~D~d-~rVRy~AcEaL~ni~k~~~~~   61 (97)
T PF12755_consen    2 YRKGGLIGLAAVAIALGKD-----I--SKYLDE------------ILPPVLKCFDDQD-SRVRYYACEALYNISKVARGE   61 (97)
T ss_pred             chhHHHHHHHHHHHHchHh-----H--HHHHHH------------HHHHHHHHcCCCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4889999999997755443     3  445666            9999998887532 234789999999999877432


Q ss_pred             ---ccchhhhhhhhhccC
Q psy11261        199 ---HVKGVVGPVLNHLDM  213 (247)
Q Consensus       199 ---tir~vl~p~~~~~D~  213 (247)
                         .+..|.+.+++-++.
T Consensus        62 ~l~~f~~IF~~L~kl~~D   79 (97)
T PF12755_consen   62 ILPYFNEIFDALCKLSAD   79 (97)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence               344455555554443

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region

Probab=83.14  E-value=5.3  Score=31.01  Aligned_cols=80  Identities=9%  Similarity=0.230  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHhccccchhhhHHHHHHHHHh---cCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcch
Q psy11261         41 SLEAMNQILLSCHAHALNLLQKKLIQKLLE---CHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV  117 (247)
Q Consensus        41 ~l~i~~kLl~~C~~q~l~LFa~~ii~~lL~---s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~  117 (247)
                      .|-.+.+.-.+++.+ +.-+.+.||.-+|.   .++...+.-||+++...+.+..+  .....+..+.+..+.++...++
T Consensus         6 gli~Laa~ai~l~~~-~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~--~~l~~f~~IF~~L~kl~~D~d~   82 (97)
T PF12755_consen    6 GLIGLAAVAIALGKD-ISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARG--EILPYFNEIFDALCKLSADPDE   82 (97)
T ss_pred             HHHHHHHHHHHchHh-HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCch
Confidence            355678888888987 88888878877775   47777889999999987766543  3555666777777777777766


Q ss_pred             hHHhhc
Q psy11261        118 ELRMAG  123 (247)
Q Consensus       118 ~~R~aG  123 (247)
                      +.|.+.
T Consensus        83 ~Vr~~a   88 (97)
T PF12755_consen   83 NVRSAA   88 (97)
T ss_pred             hHHHHH
Confidence            777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	247
2qk2_A	242	LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2	95.68
2qk2_A	242	LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2	91.92
2qk1_A	249	Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h	88.42
2bpt_A	861	Importin beta-1 subunit; nuclear transport, nucleo	85.37
2bpt_A	861	Importin beta-1 subunit; nuclear transport, nucleo	84.56
1u6g_C	1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	83.79
4fdd_A	852	Transportin-1; heat repeats, karyopherin, nuclear	81.8
1ibr_B	462	P95, importin beta-1 subunit, nuclear factor; smal	81.71
2jdq_A	450	Importin alpha-1 subunit; transport, PB2 subunit,	80.99

>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}

Probab=95.68  E-value=0.021  Score=48.06  Aligned_cols=185  Identities=12%  Similarity=0.122  Sum_probs=119.6

Q ss_pred             hhhhHHHHHHHHHHHHhhcCCCceeeHHHHHHHHHHhccccchhhhHH--HHHHHHHh-cCCcchhhHhHHHHHHhhccc
Q psy11261         15 LDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQK--KLIQKLLE-CHEHVLQILATQSFVKYANIE   91 (247)
Q Consensus        15 L~KIg~yLekR~~kdl~r~r~g~V~V~l~i~~kLl~~C~~q~l~LFa~--~ii~~lL~-s~~~~l~i~~~~tf~~F~~~~   91 (247)
                      ++|+++-+.+.....=|+.|.+    .+..+.+++..|++..-.-|.+  .++..+|. ..+.+.+..|+.++..++..-
T Consensus        13 ~~~l~~~l~~~l~s~~w~~R~~----a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l   88 (242)
T 2qk2_A           13 LSKMPKDFYDKLEEKKWTLRKE----SLEVLEKLLTDHPKLENGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL   88 (242)
T ss_dssp             GGGSCTTHHHHHTCSSHHHHHH----HHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHhhhccCCHHHHHH----HHHHHHHHHccCCCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence            3455555556665555666655    5567888999887631123444  66677775 788888999999999998643


Q ss_pred             CCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCccccccccc
Q psy11261         92 EDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYN  171 (247)
Q Consensus        92 ~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivPslL~n  171 (247)
                      .  +.+....+.+++.......+....+|.++..+|.+++....             ++.            ++|.++..
T Consensus        89 ~--~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~-------------~~~------------ll~~l~~~  141 (242)
T 2qk2_A           89 A--KRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS-------------LEA------------QQESIVES  141 (242)
T ss_dssp             G--GGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC-------------HHH------------HHHHHHHH
T ss_pred             h--hhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC-------------HHH------------HHHHHHHH
Confidence            2  24666667888888887777677999999999999987431             122            66777766


Q ss_pred             cccCCCCCh--HHHHHHHHHHHHcccc-----ccccchhhhhhhhhccCCCCCCChhhHHHHHHHHHHHh
Q psy11261        172 MHHEMTSDG--SQMAETCLRELIGRAA-----FGHVKGVVGPVLNHLDMHRLWPPKDFAYQVFRILVFSV  234 (247)
Q Consensus       172 ~~~~~~~~p--~~~a~~CL~~l~~~a~-----~ttir~vl~p~~~~~D~~~~W~~~~~A~~~~~~~~~s~  234 (247)
                      +.+   ++|  +.-+-.+|..++..++     ...+..++..++..++.. .|.-..-|..++..++..+
T Consensus       142 l~~---~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~-~~~VR~~A~~~l~~l~~~v  207 (242)
T 2qk2_A          142 LSN---KNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEP-DPTVRDSSAEALGTLIKLM  207 (242)
T ss_dssp             TTC---SCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTSS-CHHHHHHHHHHHHHHHHHH
T ss_pred             HcC---CChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHc
Confidence            653   456  3344444555444331     123556777777777443 3555577777777655444

>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}

Probab=91.92  E-value=0.56  Score=39.07  Aligned_cols=163  Identities=12%  Similarity=0.102  Sum_probs=102.3

Q ss_pred             CchhhhHHHHHHHHHHHHhhcCCCcee---eHHHHHHHHHHhccccchhhhHHHHHHHHHh---cCCcchhhHhHHHHHH
Q psy11261         13 EKLDRIGDYLYETASRDISRKRTQYVL---MSLEAMNQILLSCHAHALNLLQKKLIQKLLE---CHEHVLQILATQSFVK   86 (247)
Q Consensus        13 ~KL~KIg~yLekR~~kdl~r~r~g~V~---V~l~i~~kLl~~C~~q~l~LFa~~ii~~lL~---s~~~~l~i~~~~tf~~   86 (247)
                      ..+.+|...|.+++.+|      .|+.   -++.++..|....... +.-+++.++..|++   ..+...+.-++.++..
T Consensus        52 ~~~~~i~~~L~~~l~kd------~~~~V~~~a~~~l~~la~~l~~~-~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~  124 (242)
T 2qk2_A           52 GEYGALVSALKKVITKD------SNVVLVAMAGKCLALLAKGLAKR-FSNYASACVPSLLEKFKEKKPNVVTALREAIDA  124 (242)
T ss_dssp             CCCHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            45678888888887655      3333   4555666666655553 44555577777775   3556677888888888


Q ss_pred             hhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCcccc
Q psy11261         87 YANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIP  166 (247)
Q Consensus        87 F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivP  166 (247)
                      ++..-        .++.+++.+...-.....++|...+..|..++...+.+...     ..++..            ++|
T Consensus       125 ~~~~~--------~~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~-----~~~l~~------------l~p  179 (242)
T 2qk2_A          125 IYAST--------SLEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALN-----KKLLKL------------LTT  179 (242)
T ss_dssp             HHTTS--------CHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCC-----HHHHHH------------HHH
T ss_pred             HHHcC--------CHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCcc-----HHHHHH------------HHH
Confidence            77532        14567777766555555589999999999988754322110     123334            888


Q ss_pred             ccccccccCCCCChHHHHHHHHHHHHccccccccchhhhhhhhhcc
Q psy11261        167 SLLYNMHHEMTSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLD  212 (247)
Q Consensus       167 slL~n~~~~~~~~p~~~a~~CL~~l~~~a~~ttir~vl~p~~~~~D  212 (247)
                      .+...+++. ......-|..|+-.|+.....    ..+.|.+..+|
T Consensus       180 ~l~~~l~D~-~~~VR~~A~~~l~~l~~~vg~----~~~~~~l~~L~  220 (242)
T 2qk2_A          180 SLVKTLNEP-DPTVRDSSAEALGTLIKLMGD----KAVTPLLADVD  220 (242)
T ss_dssp             HHHHHHTSS-CHHHHHHHHHHHHHHHHHHCH----HHHGGGGTTSC
T ss_pred             HHHHHhcCC-ChHHHHHHHHHHHHHHHHcCH----HHHHHHHHhcC
Confidence            888877532 122367889999888876542    33444444443

>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}

Probab=88.42  E-value=1.2  Score=38.06  Aligned_cols=186  Identities=12%  Similarity=0.117  Sum_probs=113.8

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCceeeHHHHHHH-HHHhccccch---hhhHH--HHHHHHH-hcCCcchhhHhHHHHHHhh
Q psy11261         16 DRIGDYLYETASRDISRKRTQYVLMSLEAMNQ-ILLSCHAHAL---NLLQK--KLIQKLL-ECHEHVLQILATQSFVKYA   88 (247)
Q Consensus        16 ~KIg~yLekR~~kdl~r~r~g~V~V~l~i~~k-Ll~~C~~q~l---~LFa~--~ii~~lL-~s~~~~l~i~~~~tf~~F~   88 (247)
                      +|+.+...+++..-=|++|.    =+++.+.+ +++.|++- .   .=|.+  .++...| ...|+..+..|+..+..++
T Consensus        15 ~kl~~~f~~~l~s~~w~eRk----~al~~L~~~~~~~~~~i-~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la   89 (249)
T 2qk1_A           15 DKLPKDFQERITSSKWKDRV----EALEEFWDSVLSQTKKL-KSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELIC   89 (249)
T ss_dssp             GGSCTTHHHHHTCSSHHHHH----HHHHHHHHHTGGGCCCB-CCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred             hhCChhHHHHhhcCCHHHHH----HHHHHHHHHHHhcCCcc-ccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            34444666667655666663    35666777 88888874 3   12334  5666677 4678888899999999998


Q ss_pred             cccC-CchHHH-HhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCcccc
Q psy11261         89 NIEE-DTPSYH-RRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIP  166 (247)
Q Consensus        89 ~~~~-d~~~y~-~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivP  166 (247)
                      +.-. .  .+. .....+++...+...+....+|.++-.||.+++..+....    .  ...++.            ++|
T Consensus        90 ~~l~~~--~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~----~--~~~l~~------------ll~  149 (249)
T 2qk1_A           90 DKLKTP--GFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLA----S--SGRNED------------MLK  149 (249)
T ss_dssp             HHHCTT--TSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTC----T--TCTTHH------------HHH
T ss_pred             Hhcccc--cccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccc----c--CCcHHH------------HHH
Confidence            6432 2  344 3344566666666666556899999999999998652210    0  001333            667


Q ss_pred             ccccccccCCCCCh--HHHHHHHHHHHHccccc--c----cc-chhhhhhhhhccCCCCCCCh--hhHHHHHHHHHH
Q psy11261        167 SLLYNMHHEMTSDG--SQMAETCLRELIGRAAF--G----HV-KGVVGPVLNHLDMHRLWPPK--DFAYQVFRILVF  232 (247)
Q Consensus       167 slL~n~~~~~~~~p--~~~a~~CL~~l~~~a~~--t----ti-r~vl~p~~~~~D~~~~W~~~--~~A~~~~~~~~~  232 (247)
                      .++..+..   ++|  +.-+-.+|...+..++.  .    .+ ..++..+...++..+   ++  .-|..|+..++.
T Consensus       150 ~l~~~l~~---k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~---~~VR~aA~~~l~~i~~  220 (249)
T 2qk1_A          150 DILEHMKH---KTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQ---PAIRTIGFESFAILIK  220 (249)
T ss_dssp             HHHHHTTC---SSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSS---HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcC---CChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence            76666653   366  34555566666665542  2    25 677777777874442   22  777777775543

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A

Probab=85.37  E-value=0.93  Score=43.87  Aligned_cols=150  Identities=11%  Similarity=0.075  Sum_probs=87.7

Q ss_pred             HHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHH-HHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccch--
Q psy11261         65 IQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYD-FFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLAD--  141 (247)
Q Consensus        65 i~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~-~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~--  141 (247)
                      +..++++.+++.+..++..|..++....+  .+..... .+++.+.......+..+|..+++.+..++..........  
T Consensus       229 l~~~~~~~~~~~r~~a~~~l~~l~~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~  306 (861)
T 2bpt_A          229 VCEATQAEDIEVQAAAFGCLCKIMSKYYT--FMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQ  306 (861)
T ss_dssp             HHHHHTCSCHHHHHHHHHHHHHHHHHHGG--GCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            33455677888888999998887765332  1223333 555555555555556899999999999887531100000  


Q ss_pred             -hhcc-------cccccchhhccCCCCCCccccccccccccCCC----C--ChHHHHHHHHHHHHccccccccchhhhhh
Q psy11261        142 -NIWK-------SHHLDKRWISDGGDLPTRTIPSLLYNMHHEMT----S--DGSQMAETCLRELIGRAAFGHVKGVVGPV  207 (247)
Q Consensus       142 -~i~~-------~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~~----~--~p~~~a~~CL~~l~~~a~~ttir~vl~p~  207 (247)
                       ..|.       ...+..            ++|.++..|.+.++    +  ++..-|..||..++.......+..++..+
T Consensus       307 ~~~~~~~~~~~~~~~~~~------------il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~~~~l~~~l  374 (861)
T 2bpt_A          307 FPQSPLQSYNFALSSIKD------------VVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFV  374 (861)
T ss_dssp             CTTCSCCCCCHHHHHHHH------------HHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHHHHHHHH
T ss_pred             ccCCchhhHHHHHHHHHH------------HHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHhHHHHHHHHH
Confidence             0000       001122            88888777765321    2  35667888998888765544455566556


Q ss_pred             hhhccCCCCCCChhhHHHHHHH
Q psy11261        208 LNHLDMHRLWPPKDFAYQVFRI  229 (247)
Q Consensus       208 ~~~~D~~~~W~~~~~A~~~~~~  229 (247)
                      ...+.+. .|....-|..++..
T Consensus       375 ~~~l~~~-~~~~r~~a~~~l~~  395 (861)
T 2bpt_A          375 EQNITAD-NWRNREAAVMAFGS  395 (861)
T ss_dssp             HHHTTCS-SHHHHHHHHHHHHH
T ss_pred             HHHcCCC-ChhHHHHHHHHHHH
Confidence            6666654 48765555555443

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A

Probab=84.56  E-value=4.9  Score=38.75  Aligned_cols=152  Identities=9%  Similarity=0.121  Sum_probs=96.9

Q ss_pred             eHHHHHHHHHHhccccchhhhHHHHHH---HHHhcCCc-chhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCc
Q psy11261         40 MSLEAMNQILLSCHAHALNLLQKKLIQ---KLLECHEH-VLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDS  115 (247)
Q Consensus        40 V~l~i~~kLl~~C~~q~l~LFa~~ii~---~lL~s~~~-~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~  115 (247)
                      -.++.+..++..+..+ +.-+...++.   .++++.+. .++..++..+..++..-++  .+..-+..+++.....-...
T Consensus       575 ~~~~~l~~l~~~~~~~-~~~~~~~l~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~--~~~~~l~~i~~~l~~~l~~~  651 (861)
T 2bpt_A          575 NILTVLAAVIRKSPSS-VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGK--GFEKYLETFSPYLLKALNQV  651 (861)
T ss_dssp             HHHHHHHHHHHHCGGG-TGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGG--GGHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhccc
Confidence            4667788888888876 6556664444   44555555 6777777666665544322  34445566777666665444


Q ss_pred             chhHHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCccccccccccccCC-CCChHHHHHHHHHHHHcc
Q psy11261        116 DVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEM-TSDGSQMAETCLRELIGR  194 (247)
Q Consensus       116 ~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~-~~~p~~~a~~CL~~l~~~  194 (247)
                      ...+|.+++.++..++...++ .+.      ..++.            ++|.++.++.+.+ +.+.+..+-.|+..|+..
T Consensus       652 ~~~vr~~a~~~l~~l~~~~~~-~~~------~~~~~------------l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~~  712 (861)
T 2bpt_A          652 DSPVSITAVGFIADISNSLEE-DFR------RYSDA------------MMNVLAQMISNPNARRELKPAVLSVFGDIASN  712 (861)
T ss_dssp             TSHHHHHHHHHHHHHHHHTGG-GGH------HHHHH------------HHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhch-hcc------chHHH------------HHHHHHHHhCCccccHhhhHHHHHHHHHHHHH
Confidence            447999999999988876643 221      12333            7888887776542 245577888899888886


Q ss_pred             cc--ccc-cchhhhhhhhhccC
Q psy11261        195 AA--FGH-VKGVVGPVLNHLDM  213 (247)
Q Consensus       195 a~--~tt-ir~vl~p~~~~~D~  213 (247)
                      ..  +.. +..++.+++..++.
T Consensus       713 ~~~~~~~~l~~~l~~l~~~~~~  734 (861)
T 2bpt_A          713 IGADFIPYLNDIMALCVAAQNT  734 (861)
T ss_dssp             HGGGGHHHHHHHHHHHHHHHTC
T ss_pred             hhhhHHHHHHHHHHHHHHHHhc
Confidence            63  222 45677777777764

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A

Probab=83.79  E-value=1.8  Score=44.59  Aligned_cols=138  Identities=10%  Similarity=0.104  Sum_probs=84.1

Q ss_pred             eHHHHHHHHHHhccccchhhhHHHHHHH---HHhcCCc--chhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccC
Q psy11261         40 MSLEAMNQILLSCHAHALNLLQKKLIQK---LLECHEH--VLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHD  114 (247)
Q Consensus        40 V~l~i~~kLl~~C~~q~l~LFa~~ii~~---lL~s~~~--~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~  114 (247)
                      -++.++..++..|+.. +.-+...++..   +|+..+.  +++..++..|..+....+.. .+..-++.+++.+......
T Consensus       453 ~~~~~L~~l~~~~~~~-l~~~l~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~~~~~-~~~~~l~~llp~L~~~l~d  530 (1230)
T 1u6g_C          453 CCFNMLTELVNVLPGA-LTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQ-VFHPHVQALVPPVVACVGD  530 (1230)
T ss_dssp             HHHHHHHHHHHHSTTT-TGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGG-GGHHHHTTTHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHchhh-hHHHHHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHhCCHH-HHHhHHHHHHHHHHHHHcc
Confidence            3677888999999886 66566644444   4443333  77888888888776543222 2444445566666655555


Q ss_pred             cchhHHhhchhhhhhhHhhccccccchhhcc---cccccchhhccCCCCCCccccccccccccCCCCCh--HHHHHHHHH
Q psy11261        115 SDVELRMAGISGIQGIIRKTVSDDLADNIWK---SHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDG--SQMAETCLR  189 (247)
Q Consensus       115 ~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~---~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~~~~p--~~~a~~CL~  189 (247)
                      ...++|..++.++..++...++..  . .|.   ...++.            ++|.++..+... +.+|  +.-|-.|+.
T Consensus       531 ~~~~v~~~al~~l~~l~~~~~~~~--~-~~~~~~~~~~~~------------ll~~ll~~l~~~-d~~~~vr~~a~~~lg  594 (1230)
T 1u6g_C          531 PFYKITSEALLVTQQLVKVIRPLD--Q-PSSFDATPYIKD------------LFTCTIKRLKAA-DIDQEVKERAISCMG  594 (1230)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHCCSS--S-CCCCCCHHHHHH------------HHHHHHHHHSCS-SSCHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhcCcc--c-ccccchHHHHHH------------HHHHHHHHHhcc-CCCHHHHHHHHHHHH
Confidence            444788888999999997654410  0 000   011233            788877766432 2344  556778888


Q ss_pred             HHHccc
Q psy11261        190 ELIGRA  195 (247)
Q Consensus       190 ~l~~~a  195 (247)
                      .|+..+
T Consensus       595 ~L~~~~  600 (1230)
T 1u6g_C          595 QIICNL  600 (1230)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            888765

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*

Probab=81.80  E-value=1.7  Score=42.89  Aligned_cols=141  Identities=14%  Similarity=0.117  Sum_probs=84.5

Q ss_pred             HHhcCCcchhhHhHHHHHHhhcccCCchHHH-HhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccchhhccc
Q psy11261         68 LLECHEHVLQILATQSFVKYANIEEDTPSYH-RRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKS  146 (247)
Q Consensus        68 lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~-~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~  146 (247)
                      +++..+++.+..++.+|..++....   .+. ...+.+++.+.......++.+|...+..+..++....   ....+  +
T Consensus       223 ~~~d~~~~vr~~a~~~L~~l~~~~~---~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~---~~~~~--~  294 (852)
T 4fdd_A          223 LAGDEEPEVRKNVCRALVMLLEVRM---DRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPI---CKDVL--V  294 (852)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHCH---HHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTT---HHHHH--T
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchh---HHHHH--H
Confidence            3456777888899999988776432   232 2335677766666666666889888888877764220   00011  2


Q ss_pred             ccccchhhccCCCCCCccccccccccc----------cC---C--------CCChHHHHHHHHHHHHccccccccchhhh
Q psy11261        147 HHLDKRWISDGGDLPTRTIPSLLYNMH----------HE---M--------TSDGSQMAETCLRELIGRAAFGHVKGVVG  205 (247)
Q Consensus       147 ~~~~~~~v~~~~~~~~~ivPslL~n~~----------~~---~--------~~~p~~~a~~CL~~l~~~a~~ttir~vl~  205 (247)
                      ..+..            ++|.++..|.          .+   +        .-++...|..||..++.......+..++.
T Consensus       295 ~~~~~------------l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~~~~~l~~  362 (852)
T 4fdd_A          295 RHLPK------------LIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDELLPHILP  362 (852)
T ss_dssp             TTHHH------------HHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGGGHHHHHH
T ss_pred             HHHHH------------HHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            23344            7888877773          11   1        11346778889988887654444445555


Q ss_pred             hhhhhccCCCCCCChhhHHHHHHH
Q psy11261        206 PVLNHLDMHRLWPPKDFAYQVFRI  229 (247)
Q Consensus       206 p~~~~~D~~~~W~~~~~A~~~~~~  229 (247)
                      .+...+.+. .|....-|..++..
T Consensus       363 ~l~~~l~~~-~~~~R~aa~~alg~  385 (852)
T 4fdd_A          363 LLKELLFHH-EWVVKESGILVLGA  385 (852)
T ss_dssp             HHHHHHTCS-SHHHHHHHHHHHHH
T ss_pred             HHHHHhcCC-CHHHHHHHHHHHHH
Confidence            555566544 47766556555554

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A

Probab=81.71  E-value=1.7  Score=38.43  Aligned_cols=157  Identities=17%  Similarity=0.137  Sum_probs=81.0

Q ss_pred             HHHHhcCCcchhhHhHHHHHHhhcccCCc-hHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccchhhc
Q psy11261         66 QKLLECHEHVLQILATQSFVKYANIEEDT-PSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIW  144 (247)
Q Consensus        66 ~~lL~s~~~~l~i~~~~tf~~F~~~~~d~-~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~  144 (247)
                      ..++++.+++.+..++..|..++....+. ..|...  .+++.+........+.+|..++..+..++....+  .  ...
T Consensus       223 ~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~--~--~~~  296 (462)
T 1ibr_B          223 CEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP--ALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMD--L--AIE  296 (462)
T ss_dssp             HHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTT--THHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHH--H--HHH
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH--H--HHh
Confidence            33445677788888888888877653321 122220  4444444444444558888888888777754210  0  000


Q ss_pred             ccc-cccchhhccC-CC----CCCccccccccccccCC------CCChHHHHHHHHHHHHccccccccchhhhhhhhhcc
Q psy11261        145 KSH-HLDKRWISDG-GD----LPTRTIPSLLYNMHHEM------TSDGSQMAETCLRELIGRAAFGHVKGVVGPVLNHLD  212 (247)
Q Consensus       145 ~~~-~~~~~~v~~~-~~----~~~~ivPslL~n~~~~~------~~~p~~~a~~CL~~l~~~a~~ttir~vl~p~~~~~D  212 (247)
                      ... .-+..+.... ..    ....++|.++..+.+.+      +-++..-|..||..++.......+..++..+..++.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~~~~~~~~~~l~~~l~  376 (462)
T 1ibr_B          297 ASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIK  376 (462)
T ss_dssp             HCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTT
T ss_pred             cccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhc
Confidence            000 0000000000 00    00127787766665432      125678889999999886653334445544555665


Q ss_pred             CCCCCCChhhHHHHHHH
Q psy11261        213 MHRLWPPKDFAYQVFRI  229 (247)
Q Consensus       213 ~~~~W~~~~~A~~~~~~  229 (247)
                      + ..|....-|..++..
T Consensus       377 ~-~~~~~r~aal~~l~~  392 (462)
T 1ibr_B          377 N-PDWRYRDAAVMAFGC  392 (462)
T ss_dssp             C-SSHHHHHHHHHHHHH
T ss_pred             C-CChHHHHHHHHHHHH
Confidence            4 347666555555554

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A

Probab=80.99  E-value=5.8  Score=34.97  Aligned_cols=155  Identities=12%  Similarity=0.089  Sum_probs=91.0

Q ss_pred             eHHHHHHHHHHhccccchhhhHH--HHHHH---HHhcC-CcchhhHhHHHHHHhhcccCCchHHHHhH--HHHHHHhhhh
Q psy11261         40 MSLEAMNQILLSCHAHALNLLQK--KLIQK---LLECH-EHVLQILATQSFVKYANIEEDTPSYHRRY--DFFISKFSSM  111 (247)
Q Consensus        40 V~l~i~~kLl~~C~~q~l~LFa~--~ii~~---lL~s~-~~~l~i~~~~tf~~F~~~~~d~~~y~~~y--~~~v~~f~~l  111 (247)
                      -++..+++++..-....+.-...  .++..   +|++. +++.+..++..+..++....   ...+..  .+.++.+.++
T Consensus        39 ~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~---~~~~~~~~~~~i~~L~~l  115 (450)
T 2jdq_A           39 SATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNS---LQTRIVIQAGAVPIFIEL  115 (450)
T ss_dssp             HHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCH---HHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCH---HHHHHHHhCCCHHHHHHH
Confidence            45666666665322211222221  23333   44555 78899999988887775432   222221  4688889988


Q ss_pred             ccCcchhHHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCccccccccccccCCCCChHHHHHHHHHHH
Q psy11261        112 CHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLREL  191 (247)
Q Consensus       112 a~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~~~~p~~~a~~CL~~l  191 (247)
                      ....+..+|..++.+|..+.....  +....+.+    ..            ++|.++.-+.+.+..+....|-.||.+|
T Consensus       116 L~~~~~~vr~~a~~~L~~l~~~~~--~~~~~~~~----~~------------~i~~L~~~l~~~~~~~v~~~a~~~L~~l  177 (450)
T 2jdq_A          116 LSSEFEDVQEQAVWALGNIAGDST--MCRDYVLD----CN------------ILPPLLQLFSKQNRLTMTRNAVWALSNL  177 (450)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHTTCH--HHHHHHHH----TT------------CHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred             HcCCCHHHHHHHHHHHHHHccCCH--HHHHHHHH----CC------------CHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            887777899999999988875321  11111100    01            6777776665322233456777788888


Q ss_pred             Hccc----cccccchhhhhhhhhccCCC
Q psy11261        192 IGRA----AFGHVKGVVGPVLNHLDMHR  215 (247)
Q Consensus       192 ~~~a----~~ttir~vl~p~~~~~D~~~  215 (247)
                      +...    ....+..++.+++..+.+.+
T Consensus       178 ~~~~~~~~~~~~~~~~l~~L~~~l~~~~  205 (450)
T 2jdq_A          178 CRGKSPPPEFAKVSPCLNVLSWLLFVSD  205 (450)
T ss_dssp             HCCSSSCCCGGGTGGGHHHHHHHTTCCC
T ss_pred             hCCCCCCCCHHHHHHHHHHHHHHHccCC
Confidence            8643    23335778888888887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00