Psyllid ID: psy11264

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50
Protein Sequence
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQCSSTISTHQIPRKA
Secondary Structure (PSIPRED)
cccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccEccccccccc
Coil and Loop (DISEMBL)
mdkltfyalsspeklDRIGDYLYETASrdisrkrtqcsstisthqiprka
Flexible Loop (DISEMBL)
mdkltfyalsspekldrIGDYLYETasrdisrkrtqcsstisthqiprka
Low Complexity Region (SEG)
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQCSSTISTHQIPRKA
Disordered region (IsUnstruct)
***************DRIGDYLYE**************************
Disordered Region (DISOPRED)
*DKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQCSSTIS*H******
Disordered Region (DISEMBL)
MDKLTFYALSSPEKLDRIGDYLYETASR**********************
Disordered Region (DISPRO)
*DKLTFYALSSPEKLDRIGDYLYETASRDISRKRT***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQCSSTISTHQIPRKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	50	2.2.26 [Sep-21-2011]
Q8IGJ0	834	Protein EFR3 homolog cmp4	yes	N/A	0.68	0.040	0.735	4e-09
Q5SPP5	816	Protein EFR3 homolog B OS	yes	N/A	0.68	0.041	0.735	7e-08
Q14156	821	Protein EFR3 homolog A OS	yes	N/A	0.7	0.042	0.685	2e-07
Q8BG67	819	Protein EFR3 homolog A OS	yes	N/A	0.7	0.042	0.685	3e-07
Q641A2	819	Protein EFR3 homolog A OS	N/A	N/A	0.68	0.041	0.705	4e-07
Q6ZQ18	817	Protein EFR3 homolog B OS	no	N/A	0.68	0.041	0.705	4e-07
Q9Y2G0	817	Protein EFR3 homolog B OS	no	N/A	0.68	0.041	0.705	4e-07
Q09263	859	Protein EFR3 homolog OS=C	yes	N/A	0.68	0.039	0.647	6e-06
Q620W3	859	Protein EFR3 homolog OS=C	N/A	N/A	0.68	0.039	0.617	1e-05

>sp|Q8IGJ0|EFR3_DROME Protein EFR3 homolog cmp44E OS=Drosophila melanogaster GN=stmA PE=2 SV=3

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 33/34 (97%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFY+LSSP+KLDRIG+YLY+ A++DI+RKR
Sbjct: 62 MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95

An essential gene required for embryogenesis; required for cell viability.
Drosophila melanogaster (taxid: 7227)

>sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=efr3b PE=3 SV=2

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 29/34 (85%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFYALS+PEKLDRIG YL E  SRD++R R
Sbjct: 36 MEKLTFYALSAPEKLDRIGAYLSERLSRDVARHR 69

Danio rerio (taxid: 7955)

>sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A OS=Homo sapiens GN=EFR3A PE=1 SV=2

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
          M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct: 37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRS 71

Homo sapiens (taxid: 9606)

>sp|Q8BG67|EFR3A_MOUSE Protein EFR3 homolog A OS=Mus musculus GN=Efr3a PE=1 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
          M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct: 37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRS 71

Mus musculus (taxid: 10090)

>sp|Q641A2|EFR3A_XENLA Protein EFR3 homolog A OS=Xenopus laevis GN=efr3a PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 28/34 (82%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R
Sbjct: 37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVMRHR 70

Xenopus laevis (taxid: 8355)

>sp|Q6ZQ18|EFR3B_MOUSE Protein EFR3 homolog B OS=Mus musculus GN=Efr3b PE=1 SV=2

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFYALS+PEKLDRIG YL E   RD+ R R
Sbjct: 36 MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHR 69

Mus musculus (taxid: 10090)

>sp|Q9Y2G0|EFR3B_HUMAN Protein EFR3 homolog B OS=Homo sapiens GN=EFR3B PE=1 SV=2

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFYALS+PEKLDRIG YL E   RD+ R R
Sbjct: 36 MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHR 69

Homo sapiens (taxid: 9606)

>sp|Q09263|EFR3_CAEEL Protein EFR3 homolog OS=Caenorhabditis elegans GN=C32D5.3 PE=3 SV=1

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M KLTFYA+S PEKL+RIG+YL     RD+SR+R
Sbjct: 35 MQKLTFYAISHPEKLERIGEYLVMRMVRDLSRQR 68

Caenorhabditis elegans (taxid: 6239)

>sp|Q620W3|EFR3_CAEBR Protein EFR3 homolog OS=Caenorhabditis briggsae GN=CBG02625 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 27/34 (79%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M KLTFYA+S PEKL+RIG+YL     RD++R+R
Sbjct: 35 MQKLTFYAISHPEKLERIGEYLVMRMVRDLNRQR 68


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.128    0.358 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,377,594
Number of Sequences: 539616
Number of extensions: 377409
Number of successful extensions: 1012
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1002
Number of HSP's gapped (non-prelim): 10
length of query: 50
length of database: 191,569,459
effective HSP length: 23
effective length of query: 27
effective length of database: 179,158,291
effective search space: 4837273857
effective search space used: 4837273857
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	50
328704137	820	PREDICTED: protein EFR3 homolog cmp44E-l	0.72	0.043	0.805	2e-09
328704139	793	PREDICTED: protein EFR3 homolog cmp44E-l	0.72	0.045	0.805	2e-08
345494907	798	PREDICTED: protein EFR3 homolog cmp44E-l	0.7	0.043	0.742	1e-07
170066205	829	conserved hypothetical protein [Culex qu	0.68	0.041	0.764	1e-07
156555215	823	PREDICTED: protein EFR3 homolog cmp44E-l	0.7	0.042	0.742	1e-07
189239274	1494	PREDICTED: similar to conserved hypothet	0.68	0.022	0.764	1e-07
195426860	834	GK20943 [Drosophila willistoni] gi|19415	0.68	0.040	0.735	1e-07
270009741	818	hypothetical protein TcasGA2_TC009038 [T	0.68	0.041	0.764	1e-07
4218979	794	putative transmembrane protein cmp44E [D	0.68	0.042	0.735	1e-07
24651883	794	stambha A, isoform A [Drosophila melanog	0.68	0.042	0.735	2e-07

>gi|328704137|ref|XP_003242414.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Acyrthosiphon pisum]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/36 (80%), Positives = 34/36 (94%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQ 36
          M+KLTFYALSSPEKLDRIG+YL++ ASRDISRKR +
Sbjct: 61 MEKLTFYALSSPEKLDRIGEYLFQKASRDISRKRNE 96

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328704139|ref|XP_001947633.2| PREDICTED: protein EFR3 homolog cmp44E-like isoform 1 [Acyrthosiphon pisum]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 34/36 (94%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQ 36
          M+KLTFYALSSPEKLDRIG+YL++ ASRDISRKR +
Sbjct: 34 MEKLTFYALSSPEKLDRIGEYLFQKASRDISRKRNE 69

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494907|ref|XP_003427397.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 2 [Nasonia vitripennis]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 32/35 (91%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
          M+KL FY+LSSPEKLDRIG+YL++ ASRDISR+R 
Sbjct: 36 MEKLMFYSLSSPEKLDRIGEYLFQRASRDISRRRN 70

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170066205|ref|XP_001868152.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167862829|gb|EDS26212.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 32/34 (94%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFY+L SPEKLDRIG+YLY+ AS+DI+RKR
Sbjct: 61 MEKLTFYSLRSPEKLDRIGEYLYQRASKDINRKR 94

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555215|ref|XP_001599882.1| PREDICTED: protein EFR3 homolog cmp44E-like isoform 1 [Nasonia vitripennis]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 32/35 (91%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
          M+KL FY+LSSPEKLDRIG+YL++ ASRDISR+R 
Sbjct: 61 MEKLMFYSLSSPEKLDRIGEYLFQRASRDISRRRN 95

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239274|ref|XP_969642.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 32/34 (94%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFYALSSPEKLDRIG+Y+Y+ A+RDI R+R
Sbjct: 62 MEKLTFYALSSPEKLDRIGEYMYQRAARDIYRRR 95

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195426860|ref|XP_002061509.1| GK20943 [Drosophila willistoni] gi|194157594|gb|EDW72495.1| GK20943 [Drosophila willistoni]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 33/34 (97%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFY+LSSP+KLDRIG+YLY+ A++DI+RKR
Sbjct: 62 MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270009741|gb|EFA06189.1| hypothetical protein TcasGA2_TC009038 [Tribolium castaneum]

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 32/34 (94%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFYALSSPEKLDRIG+Y+Y+ A+RDI R+R
Sbjct: 62 MEKLTFYALSSPEKLDRIGEYMYQRAARDIYRRR 95

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|4218979|gb|AAD12254.1| putative transmembrane protein cmp44E [Drosophila melanogaster]

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 33/34 (97%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFY+LSSP+KLDRIG+YLY+ A++DI+RKR
Sbjct: 36 MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 69

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24651883|ref|NP_724711.1| stambha A, isoform A [Drosophila melanogaster] gi|16768782|gb|AAL28610.1| LD03322p [Drosophila melanogaster] gi|21627666|gb|AAF59046.2| stambha A, isoform A [Drosophila melanogaster] gi|220960006|gb|ACL92539.1| stmA-PA [synthetic construct]

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 33/34 (97%)

Query: 1  MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
          M+KLTFY+LSSP+KLDRIG+YLY+ A++DI+RKR
Sbjct: 36 MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 69

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	50
FB|FBgn0086784	834	stmA "stambha A" [Drosophila m	0.68	0.040	0.735	2.1e-08
UNIPROTKB|E5RJS1	133	EFR3A "Protein EFR3 homolog A"	0.7	0.263	0.685	5.3e-08
UNIPROTKB|E2RCW6	821	EFR3A "Uncharacterized protein	0.7	0.042	0.685	1e-06
UNIPROTKB|Q14156	821	EFR3A "Protein EFR3 homolog A"	0.7	0.042	0.685	1e-06
MGI|MGI:1923990	819	Efr3a "EFR3 homolog A (S. cere	0.7	0.042	0.685	1.7e-06
RGD|1305976	819	Efr3a "EFR3 homolog A (S. cere	0.7	0.042	0.685	1.7e-06
UNIPROTKB|E1BRM7	823	EFR3A "Uncharacterized protein	0.68	0.041	0.705	2.2e-06
MGI|MGI:2444851	817	Efr3b "EFR3 homolog B (S. cere	0.68	0.041	0.705	2.8e-06
ZFIN|ZDB-GENE-040426-1681	687	efr3a "EFR3 homolog A (S. cere	0.68	0.049	0.676	3.7e-06
WB|WBGene00016311	859	C32D5.3 [Caenorhabditis elegan	0.68	0.039	0.647	1.7e-05

FB|FBgn0086784 stmA "stambha A" [Drosophila melanogaster (taxid:7227)]

 Score = 140 (54.3 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 25/34 (73%), Positives = 33/34 (97%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
             M+KLTFY+LSSP+KLDRIG+YLY+ A++DI+RKR
Sbjct:    62 MEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95

GO:0005886 "plasma membrane" evidence=NAS

GO:0000910 "cytokinesis" evidence=IMP

GO:0007602 "phototransduction" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0016079 "synaptic vesicle exocytosis" evidence=IMP

GO:0048488 "synaptic vesicle endocytosis" evidence=IDA;IMP

GO:0045202 "synapse" evidence=IDA

GO:0030100 "regulation of endocytosis" evidence=IMP

UNIPROTKB|E5RJS1 EFR3A "Protein EFR3 homolog A" [Homo sapiens (taxid:9606)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct:     1 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRS 35

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|E2RCW6 EFR3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct:    37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRS 71

GO:0005886 "plasma membrane" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q14156 EFR3A "Protein EFR3 homolog A" [Homo sapiens (taxid:9606)]

 Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct:    37 MEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRS 71

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

MGI|MGI:1923990 Efr3a "EFR3 homolog A (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 122 (48.0 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRS 71

GO:0001533 "cornified envelope" evidence=ISO

GO:0005622 "intracellular" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

RGD|1305976 Efr3a "EFR3 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRT 35
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R+
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHRS 71

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BRM7 EFR3A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 121 (47.7 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
             M+KLTFYA+S+PEKLDRIG YL E  SRD+ R R
Sbjct:    38 MEKLTFYAVSAPEKLDRIGAYLAERLSRDVVRHR 71

GO:0005622 "intracellular" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

MGI|MGI:2444851 Efr3b "EFR3 homolog B (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 120 (47.3 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
             M+KLTFYALS+PEKLDRIG YL E   RD+ R R
Sbjct:    36 MEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHR 69

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-040426-1681 efr3a "EFR3 homolog A (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 118 (46.6 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 23/34 (67%), Positives = 28/34 (82%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
             M+KLTFYA+S+PEKLDRIG YL E  +RD+ R R
Sbjct:    37 MEKLTFYAVSAPEKLDRIGAYLAERLTRDVVRHR 70

GO:0005575 "cellular_component" evidence=ND

WB|WBGene00016311 C32D5.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 113 (44.8 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query:     1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKR 34
             M KLTFYA+S PEKL+RIG+YL     RD+SR+R
Sbjct:    35 MQKLTFYAISHPEKLERIGEYLVMRMVRDLSRQR 68


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.128   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       50        50   0.00091  102 3  11 22  0.36    27
                                                     29  0.41    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  423 (45 KB)
  Total size of DFA:  69 KB (2060 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.99u 0.09s 6.08t   Elapsed:  00:00:01
  Total cpu time:  5.99u 0.09s 6.08t   Elapsed:  00:00:01
  Start:  Thu Aug 15 14:43:38 2013   End:  Thu Aug 15 14:43:39 2013

GO:0000003 "reproduction" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BG67	EFR3A_MOUSE	No assigned EC number	0.6857	0.7	0.0427	yes	N/A
Q5SPP5	EFR3B_DANRE	No assigned EC number	0.7352	0.68	0.0416	yes	N/A
Q14156	EFR3A_HUMAN	No assigned EC number	0.6857	0.7	0.0426	yes	N/A
Q8IGJ0	EFR3_DROME	No assigned EC number	0.7352	0.68	0.0407	yes	N/A
Q09263	EFR3_CAEEL	No assigned EC number	0.6470	0.68	0.0395	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	50
KOG1877|consensus	819		99.45

>KOG1877|consensus

Probab=99.45  E-value=1.2e-14  Score=114.62  Aligned_cols=40  Identities=48%  Similarity=0.754  Sum_probs=39.2

Q ss_pred             CcceeeecccCCchHHHHHHHHHHHHhHHhhhhccCceeE
Q psy11264          1 MDKLTFYALSSPEKLDRIGDYLYETASRDISRKRTQCSST   40 (50)
Q Consensus         1 M~KLtfYals~PeKLDRIG~YL~~rl~RDl~R~R~~~v~i   40 (50)
                      |+||+|||.|+|+||||||+||.+|+.+|++|+|+|+|+|
T Consensus        36 m~kL~~YAasnp~KL~KI~~yL~~R~~kdl~~~r~~~v~I   75 (819)
T KOG1877|consen   36 MEKLTFYAASNPSKLPKIGTYLEERCYKDLRRERFGSVKI   75 (819)
T ss_pred             HHHHHHHHhhChhhhhHHHHHHHHHHHHHHHhccCcchhh
Confidence            7899999999999999999999999999999999999987

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00