Psyllid ID: psy11276

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLLPNTPTHPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRLGK
ccccccHHHcccccccccccccccccHHHHHHHHHccccccEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHcHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccccccccccc
cccccHHHHHHHHHHHHcccccccccHHHHHHHHcccccccEEccccccccccccccccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcHccccHHHcccc
qqgfgpreqinqnsayldgsliygehacqakdlrsydgklnvtlmpgrkdllpntpthpecrsrycfvagdgraseqpgltAMHTILMREHNRLAEQLVqinphwndeQLFQHARRIMVGQWQhivyneflprllglnavnlyglklsptgyykgyndnckpnimTEFATAAYRIGHsllrpfiprlgk
qqgfgpreqinqnsAYLDGSLIYGEHACQAKDLRSYDGKLNVTlmpgrkdllpntpthpecRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSllrpfiprlgk
QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLLPNTPTHPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRLGK
**************AYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLL*****HPECRSRYCFVAGDGRA***PGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFI*****
***FGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDG*L*VTLMPGRKDLLPNTPTHPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRL**
QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLLPNTPTHPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRLGK
**GFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLLPNTPTHPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIP****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLLPNTPTHPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRLGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query189 2.2.26 [Sep-21-2011]
Q9VZZ4 1527 Peroxidasin OS=Drosophila no N/A 0.931 0.115 0.430 9e-37
A4IGL7 1457 Peroxidasin OS=Xenopus tr yes N/A 0.936 0.121 0.405 2e-33
Q3UQ28 1475 Peroxidasin homolog OS=Mu yes N/A 0.936 0.12 0.410 7e-33
A1KZ92 1463 Peroxidasin-like protein yes N/A 0.920 0.118 0.408 2e-32
P82600 790 Chorion peroxidase OS=Aed N/A N/A 0.952 0.227 0.413 4e-32
Q92626 1479 Peroxidasin homolog OS=Ho no N/A 0.936 0.119 0.405 5e-32
Q7QH73 767 Chorion peroxidase OS=Ano no N/A 0.931 0.229 0.383 1e-31
Q23490 724 Peroxidase mlt-7 OS=Caeno no N/A 0.904 0.236 0.388 2e-31
P05164 745 Myeloperoxidase OS=Homo s no N/A 0.920 0.233 0.414 6e-31
P11247 718 Myeloperoxidase OS=Mus mu no N/A 0.920 0.242 0.404 7e-30
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1 Back     alignment and function desciption
 Score =  152 bits (385), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 120/195 (61%), Gaps = 19/195 (9%)

Query: 7    REQINQNSAYLDGSLIYGEHACQAKDLR---SYDGKLNVTL-MPGRKDLLPNTPTHP--E 60
            REQINQ ++Y+D S +YG     A++LR   S +G L V +  P +KD+LP        +
Sbjct: 934  REQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLRVGVHFPRQKDMLPFAAPQDGMD 993

Query: 61   CR------SRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHA 114
            CR      +  CFV+GD R +EQ GL AMHTI MREHNR+A +L QIN HW+ + L+Q A
Sbjct: 994  CRRNLDENTMSCFVSGDIRVNEQVGLLAMHTIWMREHNRIASKLKQINSHWDGDTLYQEA 1053

Query: 115  RRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYR 174
            R+I+  Q QHI + ++LP ++G + + +        G Y+GYN    P+I  EFATAA R
Sbjct: 1054 RKIVGAQMQHITFKQWLPLIIGESGMEMM-------GEYQGYNPQLNPSIANEFATAALR 1106

Query: 175  IGHSLLRPFIPRLGK 189
             GH+++ P + RL +
Sbjct: 1107 FGHTIINPILHRLNE 1121
Plays a role in extracellular matrix consolidation, phagocytosis and defense.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1 Back     alignment and function description
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2 Back     alignment and function description
>sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3 Back     alignment and function description
>sp|P82600|PERC_AEDAE Chorion peroxidase OS=Aedes aegypti GN=pxt PE=1 SV=3 Back     alignment and function description
>sp|Q92626|PXDN_HUMAN Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2 Back     alignment and function description
>sp|Q7QH73|PERC_ANOGA Chorion peroxidase OS=Anopheles gambiae GN=pxt PE=2 SV=3 Back     alignment and function description
>sp|Q23490|MLT7_CAEEL Peroxidase mlt-7 OS=Caenorhabditis elegans GN=mlt-7 PE=1 SV=1 Back     alignment and function description
>sp|P05164|PERM_HUMAN Myeloperoxidase OS=Homo sapiens GN=MPO PE=1 SV=1 Back     alignment and function description
>sp|P11247|PERM_MOUSE Myeloperoxidase OS=Mus musculus GN=Mpo PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query189
242009590 1374 conserved hypothetical protein [Pediculu 0.989 0.136 0.685 2e-73
170052031 1401 oxidase/peroxidase [Culex quinquefasciat 0.994 0.134 0.675 2e-71
328776732 1448 PREDICTED: hypothetical protein LOC41305 1.0 0.130 0.642 5e-71
403182607 1405 AAEL003933-PA [Aedes aegypti] 0.994 0.133 0.675 8e-71
157103623 1395 oxidase/peroxidase [Aedes aegypti] 0.994 0.134 0.675 8e-71
380014062 1304 PREDICTED: LOW QUALITY PROTEIN: myeloper 1.0 0.144 0.637 1e-70
347972907 1381 AGAP008350-PA [Anopheles gambiae str. PE 0.994 0.136 0.670 1e-70
350407101 1393 PREDICTED: hypothetical protein LOC10074 1.0 0.135 0.632 2e-70
312378522 1293 hypothetical protein AND_09902 [Anophele 0.994 0.145 0.664 2e-70
340729406 1402 PREDICTED: hypothetical protein LOC10064 1.0 0.134 0.626 1e-69
>gi|242009590|ref|XP_002425566.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509445|gb|EEB12828.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 131/191 (68%), Positives = 156/191 (81%), Gaps = 4/191 (2%)

Query: 1    QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRS-YDGKLNVTLMPGR-KDLLPNTPTH 58
            Q+  GPREQINQNSA+LD + IYGEH CQ ++LRS + GK+NVT  P   KDLLP +P H
Sbjct: 811  QRYLGPREQINQNSAFLDAAHIYGEHHCQGRELRSGFGGKMNVTRHPSVGKDLLPQSPIH 870

Query: 59   PECRSR--YCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARR 116
            PECRS   YCF+AGDGRASEQPGLTA+HT+ MREHNR+AE L ++NPHW+D  L++HARR
Sbjct: 871  PECRSPSGYCFIAGDGRASEQPGLTAIHTVFMREHNRIAEGLQKVNPHWDDNLLYEHARR 930

Query: 117  IMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIG 176
            I+   WQHI YNE+LPRLLG NAVNLYGLKL P GYYKGY+D C PN + EFATAA+R+G
Sbjct: 931  IISATWQHITYNEYLPRLLGWNAVNLYGLKLRPRGYYKGYSDTCNPNALNEFATAAFRLG 990

Query: 177  HSLLRPFIPRL 187
            HSLLRP +PR+
Sbjct: 991  HSLLRPHLPRM 1001

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|170052031|ref|XP_001862036.1| oxidase/peroxidase [Culex quinquefasciatus] gi|167872992|gb|EDS36375.1| oxidase/peroxidase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|328776732|ref|XP_396505.3| PREDICTED: hypothetical protein LOC413054 [Apis mellifera] Back     alignment and taxonomy information
>gi|403182607|gb|EAT44728.2| AAEL003933-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|157103623|ref|XP_001648059.1| oxidase/peroxidase [Aedes aegypti] Back     alignment and taxonomy information
>gi|380014062|ref|XP_003691062.1| PREDICTED: LOW QUALITY PROTEIN: myeloperoxidase-like, partial [Apis florea] Back     alignment and taxonomy information
>gi|347972907|ref|XP_317106.5| AGAP008350-PA [Anopheles gambiae str. PEST] gi|333469488|gb|EAA12252.5| AGAP008350-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|350407101|ref|XP_003487986.1| PREDICTED: hypothetical protein LOC100740410 [Bombus impatiens] Back     alignment and taxonomy information
>gi|312378522|gb|EFR25074.1| hypothetical protein AND_09902 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|340729406|ref|XP_003402994.1| PREDICTED: hypothetical protein LOC100646933 [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query189
FB|FBgn0032685 1394 CG10211 [Drosophila melanogast 0.978 0.132 0.634 1.1e-61
WB|WBGene00016700 1537 C46A5.4 [Caenorhabditis elegan 0.989 0.121 0.479 1.4e-42
WB|WBGene00011530 1490 T06D8.10 [Caenorhabditis elega 0.989 0.125 0.474 2.7e-42
WB|WBGene00008627 718 F09F3.5 [Caenorhabditis elegan 0.984 0.259 0.445 1.6e-37
WB|WBGene00019970 773 R08F11.7 [Caenorhabditis elega 0.957 0.234 0.446 4.4e-36
FB|FBgn0038511 753 CG5873 [Drosophila melanogaste 0.973 0.244 0.448 1.1e-35
FB|FBgn0011828 1527 Pxn "Peroxidasin" [Drosophila 0.931 0.115 0.435 3.5e-34
WB|WBGene00019613 1210 K10B4.1 [Caenorhabditis elegan 0.973 0.152 0.410 4e-34
UNIPROTKB|F1Q057 1408 PXDN "Uncharacterized protein" 0.925 0.124 0.440 2.2e-33
UNIPROTKB|F1S9J3 1377 F1S9J3 "Uncharacterized protei 0.925 0.127 0.440 4.5e-33
FB|FBgn0032685 CG10211 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 642 (231.1 bits), Expect = 1.1e-61, P = 1.1e-61
 Identities = 120/189 (63%), Positives = 144/189 (76%)

Query:     1 QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGRKDLLPNTPTHPE 60
             QQ  GPR+QINQN+ +LDGS++YGE  C +  LR + G++N T + G K+LLP  P HPE
Sbjct:   865 QQSLGPRDQINQNTHFLDGSMVYGETTCLSNKLRGFSGRMNSTQVRG-KELLPLGP-HPE 922

Query:    61 CRSR--YCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 118
             C+SR   CF+ GD RASEQPGLTA+HT  +REHNR+ E L  +NPHWN EQLF HAR+I+
Sbjct:   923 CKSRNGLCFLGGDDRASEQPGLTAIHTAFLREHNRIVEGLRGVNPHWNGEQLFHHARKIV 982

Query:   119 VGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHS 178
               Q QHIV+NEFLPR+L  NAVNLYGLKL P GYYK YN +C P +  EFA AA+RIGHS
Sbjct:   983 SAQVQHIVFNEFLPRILSWNAVNLYGLKLLPQGYYKDYNPSCSPIVFNEFAAAAFRIGHS 1042

Query:   179 LLRPFIPRL 187
             LLRP IPRL
Sbjct:  1043 LLRPHIPRL 1051
GO:0004601 "peroxidase activity" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006979 "response to oxidative stress" evidence=IEA
WB|WBGene00016700 C46A5.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00011530 T06D8.10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00008627 F09F3.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00019970 R08F11.7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0038511 CG5873 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0011828 Pxn "Peroxidasin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00019613 K10B4.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q057 PXDN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S9J3 F1S9J3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.11.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query189
cd09823 378 cd09823, peroxinectin_like, peroxinectin_like anim 1e-94
pfam03098 521 pfam03098, An_peroxidase, Animal haem peroxidase 2e-81
cd09822 420 cd09822, peroxinectin_like_bacterial, Uncharacteri 1e-65
cd09826 440 cd09826, peroxidasin_like, Animal heme peroxidase 4e-60
cd05396 370 cd05396, An_peroxidase_like, Animal heme peroxidas 2e-58
cd09825 565 cd09825, thyroid_peroxidase, Thyroid peroxidase (T 9e-50
cd09824 411 cd09824, myeloperoxidase_like, Myeloperoxidases, e 9e-46
cd09820 558 cd09820, dual_peroxidase_like, Dual oxidase and re 3e-35
cd09821 570 cd09821, An_peroxidase_bacterial_2, Uncharacterize 4e-31
cd09816 490 cd09816, prostaglandin_endoperoxide_synthase, Anim 3e-17
cd09818 484 cd09818, PIOX_like, Animal heme oxidases similar t 5e-16
cd09819 465 cd09819, An_peroxidase_bacterial_1, Uncharacterize 3e-15
PLN02283 633 PLN02283, PLN02283, alpha-dioxygenase 7e-10
cd09817 550 cd09817, linoleate_diol_synthase_like, Linoleate ( 1e-06
>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases Back     alignment and domain information 
 Score =  279 bits (716), Expect = 1e-94
 Identities = 91/189 (48%), Positives = 129/189 (68%), Gaps = 7/189 (3%)

Query: 7   REQINQNSAYLDGSLIYGEHACQAKDLRSYD-GKLNVTLMPGRKDLLPNTPTHPEC---- 61
           REQ+NQ +++LDGS +YG    +A+ LR++  G L      GR +LLP +    +     
Sbjct: 1   REQLNQVTSFLDGSQVYGSSEEEARKLRTFKGGLLKTQRRNGR-ELLPFSNNPTDDCSLS 59

Query: 62  -RSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVG 120
              + CF+AGDGR +EQPGLT+MHT+ +REHNR+A++L ++NPHW+DE+LFQ AR+I++ 
Sbjct: 60  SAGKPCFLAGDGRVNEQPGLTSMHTLFLREHNRIADELKKLNPHWDDERLFQEARKIVIA 119

Query: 121 QWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYRIGHSLL 180
           Q QHI YNEFLP LLG   +  +GL L  +GY+ GY+ N  P+I+ EFA AA+R GHSL+
Sbjct: 120 QMQHITYNEFLPILLGRELMEKFGLYLLTSGYFNGYDPNVDPSILNEFAAAAFRFGHSLV 179

Query: 181 RPFIPRLGK 189
                RL +
Sbjct: 180 PGTFERLDE 188

Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378
>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase Back     alignment and domain information
>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial Back     alignment and domain information
>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins Back     alignment and domain information
>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins Back     alignment and domain information
>gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO) Back     alignment and domain information
>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases Back     alignment and domain information
>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases Back     alignment and domain information
>gnl|CDD|188653 cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial family of heme peroxidases Back     alignment and domain information
>gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins Back     alignment and domain information
>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases Back     alignment and domain information
>gnl|CDD|188651 cd09819, An_peroxidase_bacterial_1, Uncharacterized bacterial family of heme peroxidases Back     alignment and domain information
>gnl|CDD|177921 PLN02283, PLN02283, alpha-dioxygenase Back     alignment and domain information
>gnl|CDD|188649 cd09817, linoleate_diol_synthase_like, Linoleate (8R)-dioxygenase and related enzymes Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 189
PF03098 530 An_peroxidase: Animal haem peroxidase; InterPro: I 100.0
KOG2408|consensus 719 100.0
PLN02283 633 alpha-dioxygenase 100.0
>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information 
Probab=100.00  E-value=3e-62  Score=449.33  Aligned_cols=184  Identities=52%  Similarity=0.911  Sum_probs=148.0

Q ss_pred             CCCCcccccccCCCcccCccCCCCCHhhhhhhhc-CC-CCccccc----cCCCCCCCCCCCCC--CCCccccccccCCCC
Q psy11276          2 QGFGPREQINQNSAYLDGSLIYGEHACQAKDLRS-YD-GKLNVTL----MPGRKDLLPNTPTH--PECRSRYCFVAGDGR   73 (189)
Q Consensus         2 ~~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~-~~-G~L~~~~----~~~~~~~lP~~~~~--~~c~~~~cf~~GD~R   73 (189)
                      |++ +|||+|++|+|||||+|||++++.+..||+ ++ |+|++..    ...+..+||.....  ..|   .||++||.|
T Consensus       135 ~~~-~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~~G~L~~~~~~~~~~~~~~~lp~~~~~~~~~~---~~f~~GD~R  210 (530)
T PF03098_consen  135 CSL-PREQINQATSYLDLSQVYGSSEEQARRLRSSFKGGKLKSDNGEFPPPNGGGLLPSDDPPTDSGC---RCFLAGDPR  210 (530)
T ss_dssp             SSS-STTBEE-STSSSS-HHHH-SSHHHHHHTBESSTTTEB--ETSSEEBBTTBES--B-TSCSSGHH---GSB-TSSTT
T ss_pred             Ccc-chhhhccccceeecccccCCCHHHHHHhhcchhhhhhhcccccccccCCCCCCCCCcccccccc---ccccccccc
Confidence            445 999999999999999999999999999999 88 9999732    23456788877521  123   699999999


Q ss_pred             CCcchhHHHHHHHHHhhhHHHHHHHHhhCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhhhccchhhhhhCCcCCCCCCC
Q psy11276         74 ASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYY  153 (189)
Q Consensus        74 ~ne~~~l~~lhtlf~ReHNria~~L~~~np~w~de~lfqeAR~iv~a~~Q~I~y~E~LP~llG~~~~~~~~l~~~~~g~~  153 (189)
                      +||+|+|++|||+|+|||||||++|++.||+|+||+||||||+||+|+||||||+||||+|||++.++++.+.....|+|
T Consensus       211 ~ne~~~l~~lhtlflReHNria~~L~~~np~w~de~lFqeAR~iv~a~~Q~Ivy~E~LP~llG~~~~~~~~~~~~~~g~~  290 (530)
T PF03098_consen  211 VNENPGLTALHTLFLREHNRIADELKKINPHWDDERLFQEARRIVIAQYQHIVYNEYLPALLGPEAMNKFLLPPLNNGYY  290 (530)
T ss_dssp             TTSBHHHHHHHHHHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHHHHHHHHHTTHHHHHGHGGHHHHS-G----GCG
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhhhhHhhhhhhhcchhhhhhccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888776667789


Q ss_pred             CCCCCCCCCchHHHHHHHHHHhhhccccCCccCCCC
Q psy11276        154 KGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRLGK  189 (189)
Q Consensus       154 ~gY~~~~~p~i~~EFa~AA~RfgHs~i~~~~~~~~~  189 (189)
                      .+|+++++|+|++|||+||||||||||++.+.+.++
T Consensus       291 ~~y~~~~~~~i~~EFa~aA~RfgHs~i~~~~~~~~~  326 (530)
T PF03098_consen  291 KGYDPSVDPSISNEFAAAAYRFGHSMIPDTYDRWDE  326 (530)
T ss_dssp             TTS-TTS--S-BTTH-HHHGGGGGGGS-SEEEEBTT
T ss_pred             cCCCCCCCCchhHHHHHHHHHhhheeehhhhhhccc
Confidence            999999999999999999999999999999988753

Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A ....
>KOG2408|consensus Back     alignment and domain information
>PLN02283 alpha-dioxygenase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query189
3f9p_C 467 Crystal Structure Of Myeloperoxidase From Human Leu 7e-32
1cxp_C 466 Cryogenic Crystal Structure Of Human Myeloperoxidas 7e-32
1myp_C 466 X-Ray Crystal Structure Of Canine Myeloperoxidase A 8e-32
2ikc_A 595 Crystal Structure Of Sheep Lactoperoxidase At 3.25 5e-26
3r5q_A 595 Crystal Structure Of Sheep Lactoperoxidase In Compl 7e-26
2e9e_A 595 Crystal Structure Of The Complex Of Goat Lactoperox 4e-25
2r5l_A 595 Crystal Structure Of Lactoperoxidase At 2.4a Resolu 6e-25
2gjm_A 583 Crystal Structure Of Buffalo Lactoperoxidase At 2.7 2e-22
2ips_A 595 Crystal Structure Of A Ternary Complex Of Bovine La 2e-22
2gj1_A 583 Crystal Structure Of Bovine Lactoperoxidase At 2.3a 2e-22
2pt3_A 595 Crystal Structure Of Bovine Lactoperoxidase At 2.34 3e-22
3erh_A 595 First Structural Evidence Of Substrate Specificity 3e-22
2o86_A 595 Crystal Structure Of A Ternary Complex Of Buffalo L 1e-20
2z5z_A 595 Crystal Structure Of The Complex Of Buffalo Lactope 2e-20
3olt_A 592 X-Ray Crystal Structure Of Arachidonic Acid Bound T 6e-12
3rr3_A 560 Structure Of (R)-Flurbiprofen Bound To Mcox-2 Lengt 6e-12
3nt1_A 587 High Resolution Structure Of Naproxen:cox-2 Complex 6e-12
3krk_A 591 X-Ray Crystal Structure Of Arachidonic Acid Bound I 6e-12
3hs5_A 591 X-Ray Crystal Structure Of Arachidonic Acid Bound T 6e-12
3tzi_A 593 X-Ray Crystal Structure Of Arachidonic Acid Bound I 6e-12
3mdl_A 587 X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol 6e-12
1ddx_A 552 Crystal Structure Of A Mixture Of Arachidonic Acid 6e-12
3qh0_A 610 X-Ray Crystal Structure Of Palmitic Acid Bound To T 6e-12
1pxx_A 604 Crystal Structure Of Diclofenac Bound To The Cycloo 6e-12
1cvu_A 552 Crystal Structure Of Arachidonic Acid Bound To The 6e-11
3pgh_A 587 Cyclooxygenase-2 (Prostaglandin Synthase-2) Complex 7e-11
3n8w_B 553 Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 H 2e-09
1ebv_A 551 Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid 2e-09
1diy_A 553 Crystal Structure Of Arachidonic Acid Bound In The 3e-09
1ht5_A 551 The 2.75 Angstrom Resolution Model Of Ovine Cox-1 C 3e-09
2oye_P 600 Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To 3e-09
3n8y_B 553 Structure Of Aspirin Acetylated Cyclooxygenase-1 In 3e-09
1cqe_A 580 Prostaglandin H2 Synthase-1 Complex With Flurbiprof 3e-09
1pge_A 576 Prostaglandin H2 Synthase-1 Complexed With P-(2'-Io 3e-09
1pth_A 576 The Structural Basis Of Aspirin Activity Inferred F 3e-09
1u67_A 600 Crystal Structure Of Arachidonic Acid Bound To A Mu 5e-09
1prh_A 554 The X-Ray Crystal Structure Of The Membrane Protein 3e-08
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467 Back     alignment and structure 
Iteration: 1

 Score =  133 bits (334), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 7   REQINQNSAYLDGSLIYGEHACQAKDLRSYDGKLNVTLMPGR-----KDLLPNTPTHPE- 60
           R QIN  ++++D S++YG     A++LR+   +L +  +  R     + LLP    H + 
Sbjct: 49  RNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDP 108
Query: 61  C----RSRY--CFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHA 114
           C    RS    CF+AGD R+SE P LT+MHT+L+REHNRLA +L  +NP W+ E+L+Q A
Sbjct: 109 CLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEA 168
Query: 115 RRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYR 174
           R+I+    Q I Y ++LP +LG  A+  Y     PT  Y+ YND+  P I   F T A+R
Sbjct: 169 RKIVGAMVQIITYRDYLPLVLGPTAMRKY----LPT--YRSYNDSVDPRIANVF-TNAFR 221
Query: 175 IGHSLLRPFIPRL 187
            GH+L++PF+ RL
Sbjct: 222 YGHTLIQPFMFRL 234
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466 Back     alignment and structure
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466 Back     alignment and structure
>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595 Back     alignment and structure
>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595 Back     alignment and structure
>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595 Back     alignment and structure
>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595 Back     alignment and structure
>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a Resolution Length = 583 Back     alignment and structure
>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine Lactoperoxidase With Thiocyanate And Iodide At 3.1 A Resolution Length = 595 Back     alignment and structure
>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a Resolution Length = 583 Back     alignment and structure
>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A Resolution Reveals Multiple Anion Binding Sites Length = 595 Back     alignment and structure
>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In Mammalian Peroxidases: Crystal Structures Of Substrate Complexes With Lactoperoxidases From Two Different Species Length = 595 Back     alignment and structure
>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo Lactoperoxidase With Nitrate And Iodide At 2.8 A Resolution Length = 595 Back     alignment and structure
>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Fluoride Ion At 3.5a Resolution Length = 595 Back     alignment and structure
>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of R513h Murine Cox-2 Length = 592 Back     alignment and structure
>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2 Length = 560 Back     alignment and structure
>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex. Length = 587 Back     alignment and structure
>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of L531f Murine Cox-2 Length = 591 Back     alignment and structure
>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 591 Back     alignment and structure
>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of G533v Murine Cox-2 Length = 593 Back     alignment and structure
>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 587 Back     alignment and structure
>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And Prostaglandin Bound To The Cyclooxygenase Active Site Of Cox-2: Prostaglandin Structure Length = 552 Back     alignment and structure
>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 610 Back     alignment and structure
>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 604 Back     alignment and structure
>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 552 Back     alignment and structure
>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With A Non- Selective Inhibitor, Flurbiprofen Length = 587 Back     alignment and structure
>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 Heterodimer Mutant In Complex With Flurbiprofen Length = 553 Back     alignment and structure
>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid Length = 551 Back     alignment and structure
>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Active Site Of Pghs-1 Length = 553 Back     alignment and structure
>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1 Complexed With Methyl Ester Flurbiprofen Length = 551 Back     alignment and structure
>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To Cyclooxygenase-1 Length = 600 Back     alignment and structure
>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In Complex With Diclofenac Length = 553 Back     alignment and structure
>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen Length = 580 Back     alignment and structure
>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen) Length = 576 Back     alignment and structure
>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The Crystal Structure Of Inactivated Prostaglandin H2 Synthase Length = 576 Back     alignment and structure
>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of Prostagladin H Synthase-1 That Forms Predominantly 11-hpete Length = 600 Back     alignment and structure
>pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein Prostaglandin H2 Synthase-1 Length = 554 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query189
1d2v_C 466 Myeloperoxidase; heme-protein, oxidoreductase, per 6e-55
3nt1_A 587 Prostaglandin-endoperoxide synthase 2; prostagland 3e-53
3q9k_A 595 Lactoperoxidase, LPO; bovine lactoperoxidase, oxid 1e-50
1q4g_A 553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 3e-50
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466 Back     alignment and structure
 Score =  179 bits (455), Expect = 6e-55
 Identities = 75/199 (37%), Positives = 109/199 (54%), Gaps = 19/199 (9%)

Query: 1   QQGFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYDG-----KLNVTLMPGRKDLLPNT 55
                 R QIN  ++++D S++YG     A++LR+         +N       + LLP  
Sbjct: 43  GSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFD 102

Query: 56  PTHP-ECRSR------YCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDE 108
             H   C          CF+AGD R+SE P LT+MHT+L+REHNRLA +L  +NP W+ E
Sbjct: 103 NLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGE 162

Query: 109 QLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEF 168
           +L+Q AR+I+    Q I Y ++LP +LG  A+  Y         Y+ YND+  P I   F
Sbjct: 163 RLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYL------PTYRSYNDSVDPRIANVF 216

Query: 169 ATAAYRIGHSLLRPFIPRL 187
            T A+R GH+L++PF+ RL
Sbjct: 217 -TNAFRYGHTLIQPFMFRL 234
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587 Back     alignment and structure
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595 Back     alignment and structure
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query189
1d2v_C 466 Myeloperoxidase; heme-protein, oxidoreductase, per 100.0
3q9k_A 595 Lactoperoxidase, LPO; bovine lactoperoxidase, oxid 100.0
1q4g_A 553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 100.0
3nt1_A 587 Prostaglandin-endoperoxide synthase 2; prostagland 100.0
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Back     alignment and structure
Probab=100.00  E-value=1.6e-63  Score=450.31  Aligned_cols=180  Identities=42%  Similarity=0.757  Sum_probs=162.3

Q ss_pred             CCCcccccccCCCcccCccCCCCCHhhhhhhhcCC---CCccccc-cC-CCCCCCCCCCC-CCCCc------cccccccC
Q psy11276          3 GFGPREQINQNSAYLDGSLIYGEHACQAKDLRSYD---GKLNVTL-MP-GRKDLLPNTPT-HPECR------SRYCFVAG   70 (189)
Q Consensus         3 ~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~---G~L~~~~-~~-~~~~~lP~~~~-~~~c~------~~~cf~~G   70 (189)
                      .++||||+|++|||||||+||||+++++.+||+++   |+|+++. .. .+..+||.+.. ...|.      ...||++|
T Consensus        45 ~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~~G  124 (466)
T 1d2v_C           45 NITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAG  124 (466)
T ss_dssp             SSSCCCBEECSCSSSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSSCCBTTBCCCCBCCCTTCSGGGGCTTTCCCCBCCS
T ss_pred             CCCHHHHhhccccccccccCcCCCHHHHHHHhccCCCCCeeccCCccCCCCCcCCCCCCCCCCcccccccCCCcchhccc
Confidence            45689999999999999999999999999999985   8999864 22 46678887643 33464      24699999


Q ss_pred             CCCCCcchhHHHHHHHHHhhhHHHHHHHHhhCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhhhccchhhhhhCCcCCCC
Q psy11276         71 DGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPT  150 (189)
Q Consensus        71 D~R~ne~~~l~~lhtlf~ReHNria~~L~~~np~w~de~lfqeAR~iv~a~~Q~I~y~E~LP~llG~~~~~~~~l~~~~~  150 (189)
                      |.|+||+|+|++|||||+|||||||++|+++||+|+||+||||||+||+|+||||||+||||+|||++.++++      .
T Consensus       125 D~R~ne~p~l~~lhtlflReHNria~~L~~~nP~W~DE~LFqeAR~Iv~a~~Q~I~~~EyLp~ilG~~~~~~~------~  198 (466)
T 1d2v_C          125 DTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKY------L  198 (466)
T ss_dssp             STTTTSSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH------S
T ss_pred             CcccccCHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHhCchhhhhc------C
Confidence            9999999999999999999999999999999999999999999999999999999999999999999988876      3


Q ss_pred             CCCCCCCCCCCCchHHHHHHHHHHhhhccccCCccCCCC
Q psy11276        151 GYYKGYNDNCKPNIMTEFATAAYRIGHSLLRPFIPRLGK  189 (189)
Q Consensus       151 g~~~gY~~~~~p~i~~EFa~AA~RfgHs~i~~~~~~~~~  189 (189)
                      |+|.||+++++|+|++|| +||||||||||++.+.++|+
T Consensus       199 ~~~~gy~~~v~p~isnEF-~aafRfgHsli~~~~~~~~~  236 (466)
T 1d2v_C          199 PTYRSYNDSVDPRIANVF-TNAFRYGHTLIQPFMFRLDN  236 (466)
T ss_dssp             CCCCCCCTTSCCSCBHHH-HHHGGGGGGGCCSEEECBCT
T ss_pred             CcccCCCCCCCCchhHHH-HHHHhcccccCchhhccccc
Confidence            678999999999999999 99999999999999988764
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Back     alignment and structure
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Back     alignment and structure
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 189
d1cvua1 511 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou 3e-58
g1cxp.1 570 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi 1e-56
d1q4ga1 511 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She 7e-54
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  188 bits (478), Expect = 3e-58
 Identities = 45/195 (23%), Positives = 68/195 (34%), Gaps = 16/195 (8%)

Query: 3   GFGPREQINQNSAYLDGSLIYGEHACQAKDLRSY-DGKLNVTLMPGRKDLLPNTPT---- 57
                         +D + IYGE   +   LR + DGKL    + G +   P        
Sbjct: 142 HKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQ-VIGGEVYPPTVKDTQVE 200

Query: 58  ---HPECRSRYCFVAGDGRASEQPGLTAMHTILMREHNRLAEQLVQINPHWNDEQLFQHA 114
               P       F  G       PGL    TI +REH R+ + L Q +P W DEQLFQ +
Sbjct: 201 MIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTS 260

Query: 115 RRIMVGQWQHIVYNEFLPRLLGLNAVNLYGLKLSPTGYYKGYNDNCKPNIMTEFATAAYR 174
           + I++G+   IV  +++  L G +    +            +N   +             
Sbjct: 261 KLILIGETIKIVIEDYVQHLSGYHFKLKFDP-------ELLFNQQFQYQNRIASEFNTLY 313

Query: 175 IGHSLLRPFIPRLGK 189
             H LL        +
Sbjct: 314 HWHPLLPDTFNIEDQ 328
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query189
g1cxp.1 570 Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606 100.0
d1cvua1 511 Prostaglandin H2 synthase {Mouse (Mus musculus) [T 100.0
d1q4ga1 511 Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax 100.0
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure