Psyllid ID: psy11277
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 66 | ||||||
| 291242421 | 696 | PREDICTED: thyroid peroxidase-like prote | 0.590 | 0.056 | 0.615 | 6e-09 | |
| 380020904 | 892 | PREDICTED: chorion peroxidase-like [Apis | 0.606 | 0.044 | 0.6 | 6e-09 | |
| 350404917 | 811 | PREDICTED: LOW QUALITY PROTEIN: chorion | 0.606 | 0.049 | 0.6 | 7e-09 | |
| 340713301 | 811 | PREDICTED: LOW QUALITY PROTEIN: chorion | 0.606 | 0.049 | 0.6 | 7e-09 | |
| 157105798 | 790 | peroxinectin [Aedes aegypti] gi|16620849 | 0.742 | 0.062 | 0.566 | 8e-09 | |
| 403182639 | 788 | AAEL004390-PA [Aedes aegypti] | 0.742 | 0.062 | 0.538 | 8e-09 | |
| 321477765 | 1289 | hypothetical protein DAPPUDRAFT_304755 [ | 0.575 | 0.029 | 0.657 | 9e-09 | |
| 328776002 | 745 | PREDICTED: chorion peroxidase [Apis mell | 0.606 | 0.053 | 0.6 | 9e-09 | |
| 320152813 | 467 | peroxidase-like protein [Apis mellifera] | 0.606 | 0.085 | 0.6 | 1e-08 | |
| 242023785 | 792 | Chorion peroxidase precursor, putative [ | 0.606 | 0.050 | 0.625 | 1e-08 |
| >gi|291242421|ref|XP_002741106.1| PREDICTED: thyroid peroxidase-like protein-like, partial [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
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Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 33/39 (84%)
Query: 28 FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
A+MHT+ +REHNR++ L QINPHW+DEQL+Q AR+I+
Sbjct: 283 LASMHTLFLREHNRISNILSQINPHWDDEQLYQEARKIV 321
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|380020904|ref|XP_003694316.1| PREDICTED: chorion peroxidase-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|350404917|ref|XP_003487259.1| PREDICTED: LOW QUALITY PROTEIN: chorion peroxidase-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340713301|ref|XP_003395183.1| PREDICTED: LOW QUALITY PROTEIN: chorion peroxidase-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|157105798|ref|XP_001649030.1| peroxinectin [Aedes aegypti] gi|166208492|sp|P82600.3|PERC_AEDAE RecName: Full=Chorion peroxidase; Flags: Precursor gi|108879994|gb|EAT44219.1| AAEL004386-PA [Aedes aegypti] | Back alignment and taxonomy information |
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| >gi|403182639|gb|EAT44218.2| AAEL004390-PA [Aedes aegypti] | Back alignment and taxonomy information |
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| >gi|321477765|gb|EFX88723.1| hypothetical protein DAPPUDRAFT_304755 [Daphnia pulex] | Back alignment and taxonomy information |
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| >gi|328776002|ref|XP_395479.3| PREDICTED: chorion peroxidase [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|320152813|gb|ADE45321.2| peroxidase-like protein [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|242023785|ref|XP_002432311.1| Chorion peroxidase precursor, putative [Pediculus humanus corporis] gi|212517734|gb|EEB19573.1| Chorion peroxidase precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 66 | ||||||
| UNIPROTKB|P82600 | 790 | pxt "Chorion peroxidase" [Aede | 0.742 | 0.062 | 0.566 | 2.7e-09 | |
| UNIPROTKB|G3MXZ0 | 582 | LPO "Lactoperoxidase" [Bos tau | 0.606 | 0.068 | 0.575 | 7.7e-09 | |
| UNIPROTKB|P80025 | 712 | LPO "Lactoperoxidase" [Bos tau | 0.606 | 0.056 | 0.575 | 1e-08 | |
| FB|FBgn0038511 | 753 | CG5873 [Drosophila melanogaste | 0.742 | 0.065 | 0.568 | 2.3e-08 | |
| UNIPROTKB|P11678 | 715 | EPX "Eosinophil peroxidase" [H | 0.575 | 0.053 | 0.605 | 7.4e-08 | |
| FB|FBgn0032685 | 1394 | CG10211 [Drosophila melanogast | 0.560 | 0.026 | 0.621 | 1e-07 | |
| UNIPROTKB|F1P1U6 | 701 | MPO "Uncharacterized protein" | 0.575 | 0.054 | 0.578 | 1.5e-07 | |
| MGI|MGI:97137 | 718 | Mpo "myeloperoxidase" [Mus mus | 0.560 | 0.051 | 0.594 | 1.6e-07 | |
| UNIPROTKB|A6QPT4 | 719 | MPO "MPO protein" [Bos taurus | 0.560 | 0.051 | 0.567 | 2e-07 | |
| UNIPROTKB|F1MVB0 | 719 | MPO "Uncharacterized protein" | 0.560 | 0.051 | 0.567 | 2e-07 |
| UNIPROTKB|P82600 pxt "Chorion peroxidase" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
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Score = 148 (57.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 15 GGN-RTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
GG+ RT+ L+ +M +HT+ MREHNRLA L +INPHW+DE+L+Q ARRI+
Sbjct: 443 GGDIRTNQLLGLTM---VHTLFMREHNRLAVGLSKINPHWDDERLYQEARRIL 492
|
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| UNIPROTKB|G3MXZ0 LPO "Lactoperoxidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P80025 LPO "Lactoperoxidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| FB|FBgn0038511 CG5873 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P11678 EPX "Eosinophil peroxidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| FB|FBgn0032685 CG10211 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P1U6 MPO "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:97137 Mpo "myeloperoxidase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A6QPT4 MPO "MPO protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MVB0 MPO "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 66 | |||
| cd09823 | 378 | cd09823, peroxinectin_like, peroxinectin_like anim | 3e-20 | |
| pfam03098 | 521 | pfam03098, An_peroxidase, Animal haem peroxidase | 3e-19 | |
| cd05396 | 370 | cd05396, An_peroxidase_like, Animal heme peroxidas | 2e-15 | |
| cd09826 | 440 | cd09826, peroxidasin_like, Animal heme peroxidase | 3e-14 | |
| cd09822 | 420 | cd09822, peroxinectin_like_bacterial, Uncharacteri | 1e-13 | |
| cd09816 | 490 | cd09816, prostaglandin_endoperoxide_synthase, Anim | 2e-13 | |
| cd09825 | 565 | cd09825, thyroid_peroxidase, Thyroid peroxidase (T | 6e-13 | |
| cd09824 | 411 | cd09824, myeloperoxidase_like, Myeloperoxidases, e | 8e-13 | |
| cd09818 | 484 | cd09818, PIOX_like, Animal heme oxidases similar t | 1e-08 | |
| cd09820 | 558 | cd09820, dual_peroxidase_like, Dual oxidase and re | 4e-08 | |
| PLN02283 | 633 | PLN02283, PLN02283, alpha-dioxygenase | 2e-04 | |
| cd09821 | 570 | cd09821, An_peroxidase_bacterial_2, Uncharacterize | 7e-04 |
| >gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 3e-20
Identities = 22/38 (57%), Positives = 34/38 (89%)
Query: 29 AAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+MHT+ +REHNR+A++L ++NPHW+DE+LFQ AR+I+
Sbjct: 80 TSMHTLFLREHNRIADELKKLNPHWDDERLFQEARKIV 117
|
Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378 |
| >gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase | Back alignment and domain information |
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| >gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins | Back alignment and domain information |
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| >gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins | Back alignment and domain information |
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| >gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial | Back alignment and domain information |
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| >gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins | Back alignment and domain information |
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| >gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO) | Back alignment and domain information |
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| >gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases | Back alignment and domain information |
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| >gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases | Back alignment and domain information |
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| >gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases | Back alignment and domain information |
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| >gnl|CDD|177921 PLN02283, PLN02283, alpha-dioxygenase | Back alignment and domain information |
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| >gnl|CDD|188653 cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial family of heme peroxidases | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 66 | |||
| PF03098 | 530 | An_peroxidase: Animal haem peroxidase; InterPro: I | 99.88 | |
| KOG2408|consensus | 719 | 99.86 | ||
| PLN02283 | 633 | alpha-dioxygenase | 99.86 |
| >PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-23 Score=157.15 Aligned_cols=54 Identities=48% Similarity=0.849 Sum_probs=50.6
Q ss_pred CCcCCCcccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhCCCCChHHHHHHHhhcC
Q psy11277 11 QSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66 (66)
Q Consensus 11 ~~~~~gd~~~~~n~~p~L~~~htlf~ReHNriA~~L~~~nP~W~De~lfqeARkIv 66 (66)
+||.+||.|+||| |+|+++||+|+|||||||++|++.||+|+||+||||||+||
T Consensus 202 ~~f~~GD~R~ne~--~~l~~lhtlflReHNria~~L~~~np~w~de~lFqeAR~iv 255 (530)
T PF03098_consen 202 RCFLAGDPRVNEN--PGLTALHTLFLREHNRIADELKKINPHWDDERLFQEARRIV 255 (530)
T ss_dssp GSB-TSSTTTTSB--HHHHHHHHHHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHH
T ss_pred cccccccccccch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHH
Confidence 7899999999997 99999999999999999999999999999999999999986
|
Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A .... |
| >KOG2408|consensus | Back alignment and domain information |
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| >PLN02283 alpha-dioxygenase | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 66 | ||||
| 2ikc_A | 595 | Crystal Structure Of Sheep Lactoperoxidase At 3.25 | 9e-10 | ||
| 3r5q_A | 595 | Crystal Structure Of Sheep Lactoperoxidase In Compl | 9e-10 | ||
| 2r5l_A | 595 | Crystal Structure Of Lactoperoxidase At 2.4a Resolu | 2e-09 | ||
| 2e9e_A | 595 | Crystal Structure Of The Complex Of Goat Lactoperox | 2e-09 | ||
| 3f9p_C | 467 | Crystal Structure Of Myeloperoxidase From Human Leu | 2e-08 | ||
| 1cxp_C | 466 | Cryogenic Crystal Structure Of Human Myeloperoxidas | 2e-08 | ||
| 1myp_C | 466 | X-Ray Crystal Structure Of Canine Myeloperoxidase A | 2e-08 | ||
| 3erh_A | 595 | First Structural Evidence Of Substrate Specificity | 1e-07 | ||
| 2pt3_A | 595 | Crystal Structure Of Bovine Lactoperoxidase At 2.34 | 1e-07 | ||
| 2ips_A | 595 | Crystal Structure Of A Ternary Complex Of Bovine La | 1e-07 | ||
| 2gj1_A | 583 | Crystal Structure Of Bovine Lactoperoxidase At 2.3a | 2e-07 | ||
| 2gjm_A | 583 | Crystal Structure Of Buffalo Lactoperoxidase At 2.7 | 2e-07 | ||
| 2z5z_A | 595 | Crystal Structure Of The Complex Of Buffalo Lactope | 4e-06 | ||
| 2o86_A | 595 | Crystal Structure Of A Ternary Complex Of Buffalo L | 4e-06 | ||
| 3rr3_A | 560 | Structure Of (R)-Flurbiprofen Bound To Mcox-2 Lengt | 9e-06 | ||
| 3mdl_A | 587 | X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol | 9e-06 | ||
| 3krk_A | 591 | X-Ray Crystal Structure Of Arachidonic Acid Bound I | 9e-06 | ||
| 3hs5_A | 591 | X-Ray Crystal Structure Of Arachidonic Acid Bound T | 9e-06 | ||
| 3tzi_A | 593 | X-Ray Crystal Structure Of Arachidonic Acid Bound I | 1e-05 | ||
| 3nt1_A | 587 | High Resolution Structure Of Naproxen:cox-2 Complex | 1e-05 | ||
| 3qh0_A | 610 | X-Ray Crystal Structure Of Palmitic Acid Bound To T | 1e-05 | ||
| 3olt_A | 592 | X-Ray Crystal Structure Of Arachidonic Acid Bound T | 1e-05 | ||
| 1ddx_A | 552 | Crystal Structure Of A Mixture Of Arachidonic Acid | 1e-05 | ||
| 1pxx_A | 604 | Crystal Structure Of Diclofenac Bound To The Cycloo | 1e-05 | ||
| 1cqe_A | 580 | Prostaglandin H2 Synthase-1 Complex With Flurbiprof | 2e-05 | ||
| 1pth_A | 576 | The Structural Basis Of Aspirin Activity Inferred F | 2e-05 | ||
| 1pge_A | 576 | Prostaglandin H2 Synthase-1 Complexed With P-(2'-Io | 2e-05 | ||
| 1u67_A | 600 | Crystal Structure Of Arachidonic Acid Bound To A Mu | 2e-05 | ||
| 2oye_P | 600 | Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To | 2e-05 | ||
| 3n8w_B | 553 | Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 H | 2e-05 | ||
| 1ht5_A | 551 | The 2.75 Angstrom Resolution Model Of Ovine Cox-1 C | 2e-05 | ||
| 1ebv_A | 551 | Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid | 2e-05 | ||
| 3n8y_B | 553 | Structure Of Aspirin Acetylated Cyclooxygenase-1 In | 2e-05 | ||
| 1diy_A | 553 | Crystal Structure Of Arachidonic Acid Bound In The | 2e-05 | ||
| 1cvu_A | 552 | Crystal Structure Of Arachidonic Acid Bound To The | 1e-04 | ||
| 3pgh_A | 587 | Cyclooxygenase-2 (Prostaglandin Synthase-2) Complex | 1e-04 | ||
| 1prh_A | 554 | The X-Ray Crystal Structure Of The Membrane Protein | 3e-04 |
| >pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595 | Back alignment and structure |
|
| >pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595 | Back alignment and structure |
| >pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595 | Back alignment and structure |
| >pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595 | Back alignment and structure |
| >pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467 | Back alignment and structure |
| >pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466 | Back alignment and structure |
| >pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466 | Back alignment and structure |
| >pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In Mammalian Peroxidases: Crystal Structures Of Substrate Complexes With Lactoperoxidases From Two Different Species Length = 595 | Back alignment and structure |
| >pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A Resolution Reveals Multiple Anion Binding Sites Length = 595 | Back alignment and structure |
| >pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine Lactoperoxidase With Thiocyanate And Iodide At 3.1 A Resolution Length = 595 | Back alignment and structure |
| >pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a Resolution Length = 583 | Back alignment and structure |
| >pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a Resolution Length = 583 | Back alignment and structure |
| >pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Fluoride Ion At 3.5a Resolution Length = 595 | Back alignment and structure |
| >pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo Lactoperoxidase With Nitrate And Iodide At 2.8 A Resolution Length = 595 | Back alignment and structure |
| >pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2 Length = 560 | Back alignment and structure |
| >pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 587 | Back alignment and structure |
| >pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of L531f Murine Cox-2 Length = 591 | Back alignment and structure |
| >pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 591 | Back alignment and structure |
| >pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of G533v Murine Cox-2 Length = 593 | Back alignment and structure |
| >pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex. Length = 587 | Back alignment and structure |
| >pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 610 | Back alignment and structure |
| >pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of R513h Murine Cox-2 Length = 592 | Back alignment and structure |
| >pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And Prostaglandin Bound To The Cyclooxygenase Active Site Of Cox-2: Prostaglandin Structure Length = 552 | Back alignment and structure |
| >pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 604 | Back alignment and structure |
| >pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen Length = 580 | Back alignment and structure |
| >pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The Crystal Structure Of Inactivated Prostaglandin H2 Synthase Length = 576 | Back alignment and structure |
| >pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen) Length = 576 | Back alignment and structure |
| >pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of Prostagladin H Synthase-1 That Forms Predominantly 11-hpete Length = 600 | Back alignment and structure |
| >pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To Cyclooxygenase-1 Length = 600 | Back alignment and structure |
| >pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 Heterodimer Mutant In Complex With Flurbiprofen Length = 553 | Back alignment and structure |
| >pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1 Complexed With Methyl Ester Flurbiprofen Length = 551 | Back alignment and structure |
| >pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid Length = 551 | Back alignment and structure |
| >pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In Complex With Diclofenac Length = 553 | Back alignment and structure |
| >pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Active Site Of Pghs-1 Length = 553 | Back alignment and structure |
| >pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 552 | Back alignment and structure |
| >pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With A Non- Selective Inhibitor, Flurbiprofen Length = 587 | Back alignment and structure |
| >pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein Prostaglandin H2 Synthase-1 Length = 554 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 66 | |||
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 1e-15 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 2e-14 | |
| 1d2v_C | 466 | Myeloperoxidase; heme-protein, oxidoreductase, per | 2e-14 | |
| 3q9k_A | 595 | Lactoperoxidase, LPO; bovine lactoperoxidase, oxid | 7e-14 |
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 1e-15
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 28 FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 267 LMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 305
|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553 | Back alignment and structure |
|---|
| >1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466 | Back alignment and structure |
|---|
| >3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 66 | |||
| 1d2v_C | 466 | Myeloperoxidase; heme-protein, oxidoreductase, per | 99.9 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 99.9 | |
| 3q9k_A | 595 | Lactoperoxidase, LPO; bovine lactoperoxidase, oxid | 99.9 | |
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 99.89 |
| >1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-24 Score=162.78 Aligned_cols=55 Identities=42% Similarity=0.791 Sum_probs=52.9
Q ss_pred CCCcCCCcccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhCCCCChHHHHHHHhhcC
Q psy11277 10 LQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66 (66)
Q Consensus 10 ~~~~~~gd~~~~~n~~p~L~~~htlf~ReHNriA~~L~~~nP~W~De~lfqeARkIv 66 (66)
.+||.+||.|+||| |+|+++||+|+|||||||++|++.||+|+||+||||||+||
T Consensus 118 ~~cf~~GD~R~ne~--p~l~~lhtlflReHNria~~L~~~nP~W~DE~LFqeAR~Iv 172 (466)
T 1d2v_C 118 IPCFLAGDTRSSEM--PELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 172 (466)
T ss_dssp CCCBCCSSTTTTSS--HHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred cchhcccCcccccC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Confidence 46999999999996 99999999999999999999999999999999999999986
|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... | Back alignment and structure |
|---|
| >3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... | Back alignment and structure |
|---|
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 66 | ||||
| d1q4ga1 | 511 | a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She | 1e-15 | |
| d1cvua1 | 511 | a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou | 1e-14 | |
| g1cxp.1 | 570 | a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi | 2e-14 |
| >d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Myeloperoxidase-like domain: Prostaglandin H2 synthase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 66.5 bits (162), Expect = 1e-15
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 28 FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 225 LMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 263
|
| >d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 66 | |||
| g1cxp.1 | 570 | Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606 | 99.89 | |
| d1q4ga1 | 511 | Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax | 99.89 | |
| d1cvua1 | 511 | Prostaglandin H2 synthase {Mouse (Mus musculus) [T | 99.89 |
| >d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|