Psyllid ID: psy11277


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60------
MEGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcc
cccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
meglqnslalqsspggnrthnLMLFSMFAAMHTILMREHNRLAEQLVqinphwndEQLFQHARRIM
MEGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
MEGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
*******************HNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLF*******
***********SSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
MEGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
*********L*SSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query66 2.2.26 [Sep-21-2011]
P82600 790 Chorion peroxidase OS=Aed N/A N/A 0.742 0.062 0.566 2e-10
P11678 715 Eosinophil peroxidase OS= yes N/A 0.590 0.054 0.589 3e-08
P11247 718 Myeloperoxidase OS=Mus mu yes N/A 0.590 0.054 0.564 5e-08
Q9VZZ4 1527 Peroxidasin OS=Drosophila no N/A 0.560 0.024 0.621 8e-08
P22079 712 Lactoperoxidase OS=Homo s no N/A 0.606 0.056 0.5 1e-07
P05164 745 Myeloperoxidase OS=Homo s no N/A 0.590 0.052 0.538 2e-07
Q01603 690 Peroxidase OS=Drosophila no N/A 0.575 0.055 0.552 6e-07
Q7QH73 767 Chorion peroxidase OS=Ano no N/A 0.545 0.046 0.555 8e-07
Q23490 724 Peroxidase mlt-7 OS=Caeno no N/A 0.651 0.059 0.418 1e-06
P49290 716 Eosinophil peroxidase OS= no N/A 0.590 0.054 0.487 1e-06
>sp|P82600|PERC_AEDAE Chorion peroxidase OS=Aedes aegypti GN=pxt PE=1 SV=3 Back     alignment and function desciption
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 4/53 (7%)

Query: 15  GGN-RTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
           GG+ RT+ L+  +M   +HT+ MREHNRLA  L +INPHW+DE+L+Q ARRI+
Sbjct: 443 GGDIRTNQLLGLTM---VHTLFMREHNRLAVGLSKINPHWDDERLYQEARRIL 492




Involved in the formation of a rigid and insoluble egg chorion by catalyzing chorion protein cross-linking through dityrosine formation and phenol oxidase-catalyzed chorion melanization.
Aedes aegypti (taxid: 7159)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|P11678|PERE_HUMAN Eosinophil peroxidase OS=Homo sapiens GN=EPX PE=1 SV=2 Back     alignment and function description
>sp|P11247|PERM_MOUSE Myeloperoxidase OS=Mus musculus GN=Mpo PE=2 SV=2 Back     alignment and function description
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1 Back     alignment and function description
>sp|P22079|PERL_HUMAN Lactoperoxidase OS=Homo sapiens GN=LPO PE=1 SV=2 Back     alignment and function description
>sp|P05164|PERM_HUMAN Myeloperoxidase OS=Homo sapiens GN=MPO PE=1 SV=1 Back     alignment and function description
>sp|Q01603|PERO_DROME Peroxidase OS=Drosophila melanogaster GN=Pxd PE=2 SV=2 Back     alignment and function description
>sp|Q7QH73|PERC_ANOGA Chorion peroxidase OS=Anopheles gambiae GN=pxt PE=2 SV=3 Back     alignment and function description
>sp|Q23490|MLT7_CAEEL Peroxidase mlt-7 OS=Caenorhabditis elegans GN=mlt-7 PE=1 SV=1 Back     alignment and function description
>sp|P49290|PERE_MOUSE Eosinophil peroxidase OS=Mus musculus GN=Epx PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query66
291242421 696 PREDICTED: thyroid peroxidase-like prote 0.590 0.056 0.615 6e-09
380020904 892 PREDICTED: chorion peroxidase-like [Apis 0.606 0.044 0.6 6e-09
350404917 811 PREDICTED: LOW QUALITY PROTEIN: chorion 0.606 0.049 0.6 7e-09
340713301 811 PREDICTED: LOW QUALITY PROTEIN: chorion 0.606 0.049 0.6 7e-09
157105798 790 peroxinectin [Aedes aegypti] gi|16620849 0.742 0.062 0.566 8e-09
403182639 788 AAEL004390-PA [Aedes aegypti] 0.742 0.062 0.538 8e-09
321477765 1289 hypothetical protein DAPPUDRAFT_304755 [ 0.575 0.029 0.657 9e-09
328776002 745 PREDICTED: chorion peroxidase [Apis mell 0.606 0.053 0.6 9e-09
320152813 467 peroxidase-like protein [Apis mellifera] 0.606 0.085 0.6 1e-08
242023785 792 Chorion peroxidase precursor, putative [ 0.606 0.050 0.625 1e-08
>gi|291242421|ref|XP_002741106.1| PREDICTED: thyroid peroxidase-like protein-like, partial [Saccoglossus kowalevskii] Back     alignment and taxonomy information
 Score = 64.7 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/39 (61%), Positives = 33/39 (84%)

Query: 28  FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
            A+MHT+ +REHNR++  L QINPHW+DEQL+Q AR+I+
Sbjct: 283 LASMHTLFLREHNRISNILSQINPHWDDEQLYQEARKIV 321




Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Order:

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|380020904|ref|XP_003694316.1| PREDICTED: chorion peroxidase-like [Apis florea] Back     alignment and taxonomy information
>gi|350404917|ref|XP_003487259.1| PREDICTED: LOW QUALITY PROTEIN: chorion peroxidase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340713301|ref|XP_003395183.1| PREDICTED: LOW QUALITY PROTEIN: chorion peroxidase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|157105798|ref|XP_001649030.1| peroxinectin [Aedes aegypti] gi|166208492|sp|P82600.3|PERC_AEDAE RecName: Full=Chorion peroxidase; Flags: Precursor gi|108879994|gb|EAT44219.1| AAEL004386-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|403182639|gb|EAT44218.2| AAEL004390-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|321477765|gb|EFX88723.1| hypothetical protein DAPPUDRAFT_304755 [Daphnia pulex] Back     alignment and taxonomy information
>gi|328776002|ref|XP_395479.3| PREDICTED: chorion peroxidase [Apis mellifera] Back     alignment and taxonomy information
>gi|320152813|gb|ADE45321.2| peroxidase-like protein [Apis mellifera] Back     alignment and taxonomy information
>gi|242023785|ref|XP_002432311.1| Chorion peroxidase precursor, putative [Pediculus humanus corporis] gi|212517734|gb|EEB19573.1| Chorion peroxidase precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query66
UNIPROTKB|P82600 790 pxt "Chorion peroxidase" [Aede 0.742 0.062 0.566 2.7e-09
UNIPROTKB|G3MXZ0 582 LPO "Lactoperoxidase" [Bos tau 0.606 0.068 0.575 7.7e-09
UNIPROTKB|P80025 712 LPO "Lactoperoxidase" [Bos tau 0.606 0.056 0.575 1e-08
FB|FBgn0038511 753 CG5873 [Drosophila melanogaste 0.742 0.065 0.568 2.3e-08
UNIPROTKB|P11678 715 EPX "Eosinophil peroxidase" [H 0.575 0.053 0.605 7.4e-08
FB|FBgn0032685 1394 CG10211 [Drosophila melanogast 0.560 0.026 0.621 1e-07
UNIPROTKB|F1P1U6 701 MPO "Uncharacterized protein" 0.575 0.054 0.578 1.5e-07
MGI|MGI:97137 718 Mpo "myeloperoxidase" [Mus mus 0.560 0.051 0.594 1.6e-07
UNIPROTKB|A6QPT4 719 MPO "MPO protein" [Bos taurus 0.560 0.051 0.567 2e-07
UNIPROTKB|F1MVB0 719 MPO "Uncharacterized protein" 0.560 0.051 0.567 2e-07
UNIPROTKB|P82600 pxt "Chorion peroxidase" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
 Score = 148 (57.2 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 30/53 (56%), Positives = 41/53 (77%)

Query:    15 GGN-RTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
             GG+ RT+ L+  +M   +HT+ MREHNRLA  L +INPHW+DE+L+Q ARRI+
Sbjct:   443 GGDIRTNQLLGLTM---VHTLFMREHNRLAVGLSKINPHWDDERLYQEARRIL 492




GO:0004601 "peroxidase activity" evidence=IDA
GO:0005576 "extracellular region" evidence=IC
GO:0007306 "eggshell chorion assembly" evidence=IDA
GO:0042743 "hydrogen peroxide metabolic process" evidence=IDA
UNIPROTKB|G3MXZ0 LPO "Lactoperoxidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P80025 LPO "Lactoperoxidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0038511 CG5873 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P11678 EPX "Eosinophil peroxidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0032685 CG10211 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1U6 MPO "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:97137 Mpo "myeloperoxidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A6QPT4 MPO "MPO protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MVB0 MPO "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P11247PERM_MOUSE1, ., 1, 1, ., 2, ., 20.56410.59090.0543yesN/A
P11678PERE_HUMAN1, ., 1, 1, ., 1, ., 70.58970.59090.0545yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
cd09823 378 cd09823, peroxinectin_like, peroxinectin_like anim 3e-20
pfam03098 521 pfam03098, An_peroxidase, Animal haem peroxidase 3e-19
cd05396 370 cd05396, An_peroxidase_like, Animal heme peroxidas 2e-15
cd09826 440 cd09826, peroxidasin_like, Animal heme peroxidase 3e-14
cd09822 420 cd09822, peroxinectin_like_bacterial, Uncharacteri 1e-13
cd09816 490 cd09816, prostaglandin_endoperoxide_synthase, Anim 2e-13
cd09825 565 cd09825, thyroid_peroxidase, Thyroid peroxidase (T 6e-13
cd09824 411 cd09824, myeloperoxidase_like, Myeloperoxidases, e 8e-13
cd09818 484 cd09818, PIOX_like, Animal heme oxidases similar t 1e-08
cd09820 558 cd09820, dual_peroxidase_like, Dual oxidase and re 4e-08
PLN02283 633 PLN02283, PLN02283, alpha-dioxygenase 2e-04
cd09821 570 cd09821, An_peroxidase_bacterial_2, Uncharacterize 7e-04
>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases Back     alignment and domain information
 Score = 81.5 bits (202), Expect = 3e-20
 Identities = 22/38 (57%), Positives = 34/38 (89%)

Query: 29  AAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
            +MHT+ +REHNR+A++L ++NPHW+DE+LFQ AR+I+
Sbjct: 80  TSMHTLFLREHNRIADELKKLNPHWDDERLFQEARKIV 117


Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378

>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase Back     alignment and domain information
>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins Back     alignment and domain information
>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins Back     alignment and domain information
>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial Back     alignment and domain information
>gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins Back     alignment and domain information
>gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO) Back     alignment and domain information
>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases Back     alignment and domain information
>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases Back     alignment and domain information
>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases Back     alignment and domain information
>gnl|CDD|177921 PLN02283, PLN02283, alpha-dioxygenase Back     alignment and domain information
>gnl|CDD|188653 cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial family of heme peroxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 66
PF03098 530 An_peroxidase: Animal haem peroxidase; InterPro: I 99.88
KOG2408|consensus 719 99.86
PLN02283 633 alpha-dioxygenase 99.86
>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
Probab=99.88  E-value=3e-23  Score=157.15  Aligned_cols=54  Identities=48%  Similarity=0.849  Sum_probs=50.6

Q ss_pred             CCcCCCcccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhCCCCChHHHHHHHhhcC
Q psy11277         11 QSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM   66 (66)
Q Consensus        11 ~~~~~gd~~~~~n~~p~L~~~htlf~ReHNriA~~L~~~nP~W~De~lfqeARkIv   66 (66)
                      +||.+||.|+|||  |+|+++||+|+|||||||++|++.||+|+||+||||||+||
T Consensus       202 ~~f~~GD~R~ne~--~~l~~lhtlflReHNria~~L~~~np~w~de~lFqeAR~iv  255 (530)
T PF03098_consen  202 RCFLAGDPRVNEN--PGLTALHTLFLREHNRIADELKKINPHWDDERLFQEARRIV  255 (530)
T ss_dssp             GSB-TSSTTTTSB--HHHHHHHHHHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHH
T ss_pred             cccccccccccch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHH
Confidence            7899999999997  99999999999999999999999999999999999999986



Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A ....

>KOG2408|consensus Back     alignment and domain information
>PLN02283 alpha-dioxygenase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
2ikc_A 595 Crystal Structure Of Sheep Lactoperoxidase At 3.25 9e-10
3r5q_A 595 Crystal Structure Of Sheep Lactoperoxidase In Compl 9e-10
2r5l_A 595 Crystal Structure Of Lactoperoxidase At 2.4a Resolu 2e-09
2e9e_A 595 Crystal Structure Of The Complex Of Goat Lactoperox 2e-09
3f9p_C 467 Crystal Structure Of Myeloperoxidase From Human Leu 2e-08
1cxp_C 466 Cryogenic Crystal Structure Of Human Myeloperoxidas 2e-08
1myp_C 466 X-Ray Crystal Structure Of Canine Myeloperoxidase A 2e-08
3erh_A 595 First Structural Evidence Of Substrate Specificity 1e-07
2pt3_A 595 Crystal Structure Of Bovine Lactoperoxidase At 2.34 1e-07
2ips_A 595 Crystal Structure Of A Ternary Complex Of Bovine La 1e-07
2gj1_A 583 Crystal Structure Of Bovine Lactoperoxidase At 2.3a 2e-07
2gjm_A 583 Crystal Structure Of Buffalo Lactoperoxidase At 2.7 2e-07
2z5z_A 595 Crystal Structure Of The Complex Of Buffalo Lactope 4e-06
2o86_A 595 Crystal Structure Of A Ternary Complex Of Buffalo L 4e-06
3rr3_A 560 Structure Of (R)-Flurbiprofen Bound To Mcox-2 Lengt 9e-06
3mdl_A 587 X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol 9e-06
3krk_A 591 X-Ray Crystal Structure Of Arachidonic Acid Bound I 9e-06
3hs5_A 591 X-Ray Crystal Structure Of Arachidonic Acid Bound T 9e-06
3tzi_A 593 X-Ray Crystal Structure Of Arachidonic Acid Bound I 1e-05
3nt1_A 587 High Resolution Structure Of Naproxen:cox-2 Complex 1e-05
3qh0_A 610 X-Ray Crystal Structure Of Palmitic Acid Bound To T 1e-05
3olt_A 592 X-Ray Crystal Structure Of Arachidonic Acid Bound T 1e-05
1ddx_A 552 Crystal Structure Of A Mixture Of Arachidonic Acid 1e-05
1pxx_A 604 Crystal Structure Of Diclofenac Bound To The Cycloo 1e-05
1cqe_A 580 Prostaglandin H2 Synthase-1 Complex With Flurbiprof 2e-05
1pth_A 576 The Structural Basis Of Aspirin Activity Inferred F 2e-05
1pge_A 576 Prostaglandin H2 Synthase-1 Complexed With P-(2'-Io 2e-05
1u67_A 600 Crystal Structure Of Arachidonic Acid Bound To A Mu 2e-05
2oye_P 600 Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To 2e-05
3n8w_B 553 Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 H 2e-05
1ht5_A 551 The 2.75 Angstrom Resolution Model Of Ovine Cox-1 C 2e-05
1ebv_A 551 Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid 2e-05
3n8y_B 553 Structure Of Aspirin Acetylated Cyclooxygenase-1 In 2e-05
1diy_A 553 Crystal Structure Of Arachidonic Acid Bound In The 2e-05
1cvu_A 552 Crystal Structure Of Arachidonic Acid Bound To The 1e-04
3pgh_A 587 Cyclooxygenase-2 (Prostaglandin Synthase-2) Complex 1e-04
1prh_A 554 The X-Ray Crystal Structure Of The Membrane Protein 3e-04
>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595 Back     alignment and structure

Iteration: 1

Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 34/40 (85%) Query: 27 MFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66 + A +HT+L+REHNRLA +L ++NPHW+ E+L+Q AR+I+ Sbjct: 261 LLATVHTLLLREHNRLARELKRLNPHWDGEKLYQEARKIL 300
>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595 Back     alignment and structure
>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595 Back     alignment and structure
>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595 Back     alignment and structure
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467 Back     alignment and structure
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466 Back     alignment and structure
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466 Back     alignment and structure
>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In Mammalian Peroxidases: Crystal Structures Of Substrate Complexes With Lactoperoxidases From Two Different Species Length = 595 Back     alignment and structure
>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A Resolution Reveals Multiple Anion Binding Sites Length = 595 Back     alignment and structure
>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine Lactoperoxidase With Thiocyanate And Iodide At 3.1 A Resolution Length = 595 Back     alignment and structure
>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a Resolution Length = 583 Back     alignment and structure
>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a Resolution Length = 583 Back     alignment and structure
>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Fluoride Ion At 3.5a Resolution Length = 595 Back     alignment and structure
>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo Lactoperoxidase With Nitrate And Iodide At 2.8 A Resolution Length = 595 Back     alignment and structure
>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2 Length = 560 Back     alignment and structure
>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 587 Back     alignment and structure
>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of L531f Murine Cox-2 Length = 591 Back     alignment and structure
>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 591 Back     alignment and structure
>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of G533v Murine Cox-2 Length = 593 Back     alignment and structure
>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex. Length = 587 Back     alignment and structure
>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 610 Back     alignment and structure
>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of R513h Murine Cox-2 Length = 592 Back     alignment and structure
>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And Prostaglandin Bound To The Cyclooxygenase Active Site Of Cox-2: Prostaglandin Structure Length = 552 Back     alignment and structure
>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 604 Back     alignment and structure
>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen Length = 580 Back     alignment and structure
>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The Crystal Structure Of Inactivated Prostaglandin H2 Synthase Length = 576 Back     alignment and structure
>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen) Length = 576 Back     alignment and structure
>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of Prostagladin H Synthase-1 That Forms Predominantly 11-hpete Length = 600 Back     alignment and structure
>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To Cyclooxygenase-1 Length = 600 Back     alignment and structure
>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 Heterodimer Mutant In Complex With Flurbiprofen Length = 553 Back     alignment and structure
>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1 Complexed With Methyl Ester Flurbiprofen Length = 551 Back     alignment and structure
>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid Length = 551 Back     alignment and structure
>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In Complex With Diclofenac Length = 553 Back     alignment and structure
>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Active Site Of Pghs-1 Length = 553 Back     alignment and structure
>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 552 Back     alignment and structure
>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With A Non- Selective Inhibitor, Flurbiprofen Length = 587 Back     alignment and structure
>pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein Prostaglandin H2 Synthase-1 Length = 554 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query66
3nt1_A 587 Prostaglandin-endoperoxide synthase 2; prostagland 1e-15
1q4g_A 553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 2e-14
1d2v_C 466 Myeloperoxidase; heme-protein, oxidoreductase, per 2e-14
3q9k_A 595 Lactoperoxidase, LPO; bovine lactoperoxidase, oxid 7e-14
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587 Back     alignment and structure
 Score = 67.8 bits (165), Expect = 1e-15
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 28  FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
                TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 267 LMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 305


>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553 Back     alignment and structure
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466 Back     alignment and structure
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query66
1d2v_C 466 Myeloperoxidase; heme-protein, oxidoreductase, per 99.9
1q4g_A 553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 99.9
3q9k_A 595 Lactoperoxidase, LPO; bovine lactoperoxidase, oxid 99.9
3nt1_A 587 Prostaglandin-endoperoxide synthase 2; prostagland 99.89
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Back     alignment and structure
Probab=99.90  E-value=1.3e-24  Score=162.78  Aligned_cols=55  Identities=42%  Similarity=0.791  Sum_probs=52.9

Q ss_pred             CCCcCCCcccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhCCCCChHHHHHHHhhcC
Q psy11277         10 LQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM   66 (66)
Q Consensus        10 ~~~~~~gd~~~~~n~~p~L~~~htlf~ReHNriA~~L~~~nP~W~De~lfqeARkIv   66 (66)
                      .+||.+||.|+|||  |+|+++||+|+|||||||++|++.||+|+||+||||||+||
T Consensus       118 ~~cf~~GD~R~ne~--p~l~~lhtlflReHNria~~L~~~nP~W~DE~LFqeAR~Iv  172 (466)
T 1d2v_C          118 IPCFLAGDTRSSEM--PELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV  172 (466)
T ss_dssp             CCCBCCSSTTTTSS--HHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred             cchhcccCcccccC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Confidence            46999999999996  99999999999999999999999999999999999999986



>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Back     alignment and structure
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Back     alignment and structure
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 66
d1q4ga1 511 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She 1e-15
d1cvua1 511 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou 1e-14
g1cxp.1 570 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi 2e-14
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]
 Score = 66.5 bits (162), Expect = 1e-15
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 28  FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
                TI +REHNR+ + L   +P W DEQLFQ AR I+
Sbjct: 225 LMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 263


>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query66
g1cxp.1 570 Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606 99.89
d1q4ga1 511 Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax 99.89
d1cvua1 511 Prostaglandin H2 synthase {Mouse (Mus musculus) [T 99.89
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure