Psyllid ID: psy11370

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
MLIDNYEHIFNNGVITYQPDKSQKLNKSNKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSGDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI
cccccccccEEcccccccccHHccccccccccEEEEEEEcEEEEEccEEEccccccccccccccHHHHHHHHHHHHccccccEEEEEEEEHHHHHHHHHccccccccccEEEEcEEEcccccccEEEEEEEEEccEEEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccHHHHHHHHHcccc
ccccccccccccHHHHHHHHHHHHHHccccccEEEEEEcHHEEEEHHHHHHccHHHHHccccccHHHHHHHHHHHHccccHHHHEEHHHHHHHHHHHHEEcHHHHHHHHHHHHHHccccccccccEEEEEEEEcccEEEEEHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccEEcccccHHHHHHHHHHccc
mlidnyehifnngvityqpdksqklnKSNKRLVKIFVGTwnylipfsqeldlskeailydrsSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITnidkdrmssgdlgnkggVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIhfkendklipdhdlifWFGDLNYRFDKLSRDSVIELINRKEI
mlidnyehifnngvityqpdksqklNKSNKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIdkdrmssgdlgnKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKlsrdsvielinrkei
MLIDNYEHIFNNGVITYQPDKSQKLNKSNKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSGDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI
***DNYEHIFNNGVITYQ**********NKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDR***GDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELI*****
MLIDNYEHIFNNGV******************VKIFVGTWNYLIPFSQELDLSKEAI*********DWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSGDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHF*****LIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKE*
MLIDNYEHIFNNGVITYQPDKSQKLNKSNKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSGDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI
*****Y*HIFNNGVITYQPDKSQKLNKSNKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSGDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLIDNYEHIFNNGVITYQPDKSQKLNKSNKRLVKIFVGTWNYLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSGDLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query208 2.2.26 [Sep-21-2011]
P32019 993 Type II inositol 1,4,5-tr yes N/A 0.788 0.165 0.379 1e-31
Q8K337 993 Type II inositol 1,4,5-tr yes N/A 0.783 0.164 0.364 5e-30
Q01968 901 Inositol polyphosphate 5- no N/A 0.855 0.197 0.331 6e-28
Q6NVF0 900 Inositol polyphosphate 5- no N/A 0.875 0.202 0.336 7e-28
D3ZGS3 902 Inositol polyphosphate 5- no N/A 0.831 0.191 0.330 9e-28
Q12271 1107 Polyphosphatidylinositol yes N/A 0.754 0.141 0.347 4e-22
O43001 1076 Inositol-1,4,5-trisphosph yes N/A 0.793 0.153 0.294 4e-21
Q9D2G5 1434 Synaptojanin-2 OS=Mus mus no N/A 0.783 0.113 0.301 6e-20
O18964 1324 Synaptojanin-1 (Fragment) no N/A 0.778 0.122 0.321 7e-20
O55207 1496 Synaptojanin-2 OS=Rattus no N/A 0.783 0.108 0.295 2e-19
>sp|P32019|I5P2_HUMAN Type II inositol 1,4,5-trisphosphate 5-phosphatase OS=Homo sapiens GN=INPP5B PE=1 SV=4 Back     alignment and function desciption
 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 110/174 (63%), Gaps = 10/174 (5%)

Query: 42  YLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVR 101
           Y + F QELDLSKEA  +  + +E++W   +++ L      Y +V+ IR++GIM++++V+
Sbjct: 377 YCVGF-QELDLSKEAFFFHDTPKEEEWFKAVSEGLHP-DAKYAKVKLIRLVGIMLLLYVK 434

Query: 102 DSFLSQITNIDKDRMSSG---DLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNAD 158
               + I+ ++ + + +G    +GNKGGVAIRF+ + T IC + SH A+HI   E RN D
Sbjct: 435 QEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQD 494

Query: 159 FKNILNQIHFKENDKLIP-----DHDLIFWFGDLNYRFDKLSRDSVIELINRKE 207
           +K+I +++ F + D  +P     +HD+I W GDLNYR ++L  + V +LI  K+
Sbjct: 495 YKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKD 548
Hydrolyzes phosphatidylinositol 4,5-bisphosphate (PtIns(4,5)P2) and the signaling molecule phosphatidylinositol 1,4,5-trisphosphate (PtIns(1,4,5)P3), and thereby modulates cellular signaling events.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 3EC: 6
>sp|Q8K337|I5P2_MOUSE Type II inositol 1,4,5-trisphosphate 5-phosphatase OS=Mus musculus GN=Inpp5b PE=1 SV=1 Back     alignment and function description
>sp|Q01968|OCRL_HUMAN Inositol polyphosphate 5-phosphatase OCRL-1 OS=Homo sapiens GN=OCRL PE=1 SV=3 Back     alignment and function description
>sp|Q6NVF0|OCRL_MOUSE Inositol polyphosphate 5-phosphatase OCRL-1 OS=Mus musculus GN=Ocrl PE=2 SV=1 Back     alignment and function description
>sp|D3ZGS3|OCRL_RAT Inositol polyphosphate 5-phosphatase OCRL-1 OS=Rattus norvegicus GN=Ocrl PE=1 SV=1 Back     alignment and function description
>sp|Q12271|INP53_YEAST Polyphosphatidylinositol phosphatase INP53 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=INP53 PE=1 SV=1 Back     alignment and function description
>sp|O43001|SYJ1_SCHPO Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=syj1 PE=1 SV=1 Back     alignment and function description
>sp|Q9D2G5|SYNJ2_MOUSE Synaptojanin-2 OS=Mus musculus GN=Synj2 PE=2 SV=2 Back     alignment and function description
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|O55207|SYNJ2_RAT Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query208
328712131 864 PREDICTED: type II inositol-1,4,5-trisph 0.846 0.203 0.359 2e-33
395730744 652 PREDICTED: type II inositol 1,4,5-trisph 0.788 0.251 0.390 8e-31
345327251 932 PREDICTED: type II inositol-1,4,5-trisph 0.788 0.175 0.379 2e-30
242010076 893 Type II inositol-1,4,5-trisphosphate 5-p 0.817 0.190 0.352 2e-30
357623798 670 hypothetical protein KGM_06457 [Danaus p 0.812 0.252 0.358 2e-30
348553028 917 PREDICTED: type II inositol-1,4,5-trisph 0.783 0.177 0.393 3e-30
301618009 1177 PREDICTED: inositol polyphosphate 5-phos 0.831 0.146 0.364 3e-30
115529017 929 ocrl protein [Xenopus (Silurana) tropica 0.831 0.186 0.364 3e-30
410966818 1003 PREDICTED: LOW QUALITY PROTEIN: type II 0.783 0.162 0.381 4e-30
395830149 994 PREDICTED: type II inositol 1,4,5-trisph 0.783 0.163 0.387 4e-30
>gi|328712131|ref|XP_001942987.2| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 122/206 (59%), Gaps = 30/206 (14%)

Query: 28  SNKRLVKIFVGTWN-----------------------YLIPFSQELDLSKEAILYDRSSR 64
           +N +  +I++GTWN                       Y I F QELDLSKEA L++ S R
Sbjct: 205 TNAQNFRIYIGTWNVNGQPTLSSLNDWLTCDSEPPDIYAIGF-QELDLSKEAFLFNDSPR 263

Query: 65  EKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSG---DL 121
           E++WL  +TK L +   NY +V  +R++G+M+++FV++  +  + N+  D + +G    L
Sbjct: 264 EEEWLQAVTKSLNS-KGNYKKVSLVRLVGMMLIVFVKNKHMDHVKNVATDTVGTGIMGKL 322

Query: 122 GNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKE--NDKLIPDHD 179
           GNKGGVA+R + + T +CF+ +H A+H+   E RN D++NI +++ F      K + DH+
Sbjct: 323 GNKGGVAVRMDFHNTSLCFVNTHLAAHVEEYERRNQDYQNICSRMVFSNFIPPKTVKDHN 382

Query: 180 LIFWFGDLNYRFDKLSRDSVIELINR 205
            ++WFGDLNYR  ++   SV +L+ +
Sbjct: 383 QVYWFGDLNYRITEMDAISVKDLVRK 408

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|395730744|ref|XP_002811083.2| PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase-like [Pongo abelii] Back     alignment and taxonomy information
>gi|345327251|ref|XP_003431145.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase [Ornithorhynchus anatinus] Back     alignment and taxonomy information
>gi|242010076|ref|XP_002425802.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor, putative [Pediculus humanus corporis] gi|212509735|gb|EEB13064.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|357623798|gb|EHJ74820.1| hypothetical protein KGM_06457 [Danaus plexippus] Back     alignment and taxonomy information
>gi|348553028|ref|XP_003462329.1| PREDICTED: type II inositol-1,4,5-trisphosphate 5-phosphatase-like [Cavia porcellus] Back     alignment and taxonomy information
>gi|301618009|ref|XP_002938425.1| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1 [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|115529017|gb|AAI24574.1| ocrl protein [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|410966818|ref|XP_003989925.1| PREDICTED: LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase [Felis catus] Back     alignment and taxonomy information
>gi|395830149|ref|XP_003788197.1| PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase [Otolemur garnettii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query208
UNIPROTKB|P32019 993 INPP5B "Type II inositol 1,4,5 0.783 0.164 0.382 1.4e-29
UNIPROTKB|D4A2N2310 Inpp5b "Protein Inpp5b" [Rattu 0.778 0.522 0.365 2.7e-29
RGD|1311511 757 Inpp5b "inositol polyphosphate 0.778 0.214 0.373 2.7e-29
ZFIN|ZDB-GENE-061110-61 952 ocrl "oculocerebrorenal syndro 0.793 0.173 0.387 4.4e-29
UNIPROTKB|F1LP71 995 Inpp5b "Protein Inpp5b" [Rattu 0.778 0.162 0.373 4.8e-29
ZFIN|ZDB-GENE-110411-228 907 inpp5b "inositol polyphosphate 0.783 0.179 0.382 5.2e-29
UNIPROTKB|F1P2F3 895 Gga.53675 "Uncharacterized pro 0.788 0.183 0.375 5.4e-29
UNIPROTKB|F1NY08 899 Gga.53675 "Uncharacterized pro 0.788 0.182 0.375 5.5e-29
UNIPROTKB|F1NLK6 707 INPP5B "Uncharacterized protei 0.778 0.229 0.367 6.1e-29
UNIPROTKB|E2R991 799 INPP5B "Uncharacterized protei 0.778 0.202 0.379 6.5e-29
UNIPROTKB|P32019 INPP5B "Type II inositol 1,4,5-trisphosphate 5-phosphatase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 339 (124.4 bits), Expect = 1.4e-29, P = 1.4e-29
 Identities = 67/175 (38%), Positives = 112/175 (64%)

Query:    42 YLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPE-NYTQVEAIRMLGIMMVIFV 100
             Y + F QELDLSKEA  +  + +E++W   +++ L   P+  Y +V+ IR++GIM++++V
Sbjct:   377 YCVGF-QELDLSKEAFFFHDTPKEEEWFKAVSEGLH--PDAKYAKVKLIRLVGIMLLLYV 433

Query:   101 RDSFLSQITNIDKDRMSSG---DLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNA 157
             +    + I+ ++ + + +G    +GNKGGVAIRF+ + T IC + SH A+HI   E RN 
Sbjct:   434 KQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQ 493

Query:   158 DFKNILNQIHFKENDKLIP-----DHDLIFWFGDLNYRFDKLSRDSVIELINRKE 207
             D+K+I +++ F + D  +P     +HD+I W GDLNYR ++L  + V +LI  K+
Sbjct:   494 DYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKD 548
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0030317 "sperm motility" evidence=IEA
GO:0070613 "regulation of protein processing" evidence=IEA
GO:0001701 "in utero embryonic development" evidence=IEA
GO:0007283 "spermatogenesis" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IEA
GO:0030670 "phagocytic vesicle membrane" evidence=IEA
GO:0031901 "early endosome membrane" evidence=IEA
GO:0046856 "phosphatidylinositol dephosphorylation" evidence=IDA
GO:0004439 "phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity" evidence=IDA
GO:0052658 "inositol-1,4,5-trisphosphate 5-phosphatase activity" evidence=IDA
GO:0005829 "cytosol" evidence=IDA;TAS
GO:0016020 "membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0007264 "small GTPase mediated signal transduction" evidence=TAS
GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS
GO:0005737 "cytoplasm" evidence=IDA
GO:0015630 "microtubule cytoskeleton" evidence=IDA
UNIPROTKB|D4A2N2 Inpp5b "Protein Inpp5b" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1311511 Inpp5b "inositol polyphosphate-5-phosphatase B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061110-61 ocrl "oculocerebrorenal syndrome of Lowe" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1LP71 Inpp5b "Protein Inpp5b" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-110411-228 inpp5b "inositol polyphosphate-5-phosphatase B" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2F3 Gga.53675 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NY08 Gga.53675 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NLK6 INPP5B "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2R991 INPP5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query208
cd09093292 cd09093, INPP5c_INPP5B, Catalytic inositol polypho 4e-59
cd09074299 cd09074, INPP5c, Catalytic domain of inositol poly 3e-44
smart00128306 smart00128, IPPc, Inositol polyphosphate phosphata 3e-36
cd09090291 cd09090, INPP5c_ScInp51p-like, Catalytic inositol 3e-35
cd09094300 cd09094, INPP5c_INPP5J-like, Catalytic inositol po 2e-33
cd09089 328 cd09089, INPP5c_Synj, Catalytic inositol polyphosp 2e-32
cd09099 336 cd09099, INPP5c_Synj2, Catalytic inositol polyphos 1e-26
COG5411 460 COG5411, COG5411, Phosphatidylinositol 5-phosphate 8e-25
cd09098 336 cd09098, INPP5c_Synj1, Catalytic inositol polyphos 2e-23
PLN03191 621 PLN03191, PLN03191, Type I inositol-1,4,5-trisphos 8e-21
cd09095298 cd09095, INPP5c_INPP5E-like, Catalytic inositol po 6e-15
cd09101304 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol p 9e-15
cd09091 307 cd09091, INPP5c_SHIP, Catalytic inositol polyphosp 4e-11
cd09100 307 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol p 5e-10
cd08372241 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase 5e-04
pfam03372143 pfam03372, Exo_endo_phos, Endonuclease/Exonuclease 0.001
>gnl|CDD|197327 cd09093, INPP5c_INPP5B, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins Back     alignment and domain information 
 Score =  187 bits (476), Expect = 4e-59
 Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 31/204 (15%)

Query: 34  KIFVGTWN-----------------------YLIPFSQELDLSKEAILYDRSSREKDWLA 70
           +IFVGTWN                       Y I F QELDLS EA L++ SSRE++W+ 
Sbjct: 2   RIFVGTWNVNGQSPDESLRPWLSCDEEPPDIYAIGF-QELDLSAEAFLFNDSSREQEWVK 60

Query: 71  VITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDR---MSSGDLGNKGGV 127
            + + L    + Y +V+ IR++G+M+++FV+      I  +  +       G +GNKGGV
Sbjct: 61  AVERGLHPDAK-YKKVKLIRLVGMMLLVFVKKEHRQHIKEVAAETVGTGIMGKMGNKGGV 119

Query: 128 AIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKENDKL---IPDHDLIFWF 184
           A+RF+ + T  CF+ SH A+H+  VE RN D+K+I  ++ F++ D     I DHD++FW 
Sbjct: 120 AVRFQFHNTTFCFVNSHLAAHMEEVERRNQDYKDICARMKFEDPDGPPLSISDHDVVFWL 179

Query: 185 GDLNYRFDKLSRDSVIELINRKEI 208
           GDLNYR  +L  + V ELI + ++
Sbjct: 180 GDLNYRIQELPTEEVKELIEKNDL 203

This subfamily contains the INPP5c domain of type II inositol polyphosphate 5-phosphatase I (INPP5B), Oculocerebrorenal syndrome of Lowe 1 (OCRL-1), and related proteins. It belongs to a family of Mg2+-dependent inositol polyphosphate 5-phosphatases, which hydrolyze the 5-phosphate from the inositol ring of various 5-position phosphorylated phosphoinositides (PIs) and inositol phosphates (IPs), and to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. INPP5B and OCRL1 preferentially hydrolyze the 5-phosphate of phosphatidylinositol (4,5)- bisphosphate [PI(4,5)P2] and phosphatidylinositol (3,4,5)- trisphosphate [PI(3,4,5)P3]. INPP5B can also hydrolyze soluble inositol (1,4,5)-trisphosphate [I(1,4,5)P3] and inositol (1,3,4,5)-tetrakisphosphate [I(1,3,4,5)P4]. INPP5B participates in the endocytic pathway and in the early secretory pathway. In the latter, it may function in retrograde ERGIC (ER-to-Golgi intermediate compartment)-to-ER transport; it binds specific RAB proteins within the secretory pathway. In the endocytic pathway, it binds RAB5 and during endocytosis, may function in a RAB5-controlled cascade for converting PI(3,4,5)P3 to phosphatidylinositol 3-phosphate (PI3P). This cascade may link growth factor signaling and membrane dynamics. Mutation in OCRL1 is implicated in Lowe syndrome, an X-linked recessive multisystem disorder, which includes defects in eye, brain, and kidney function, and in Type 2 Dent's disease, a disorder with only the renal symptoms. OCRL-1 may have a role in membrane trafficking within the endocytic pathway and at the trans-Golgi network, and may participate in actin dynamics or signaling from endomembranes. OCRL1 and INPP5B have overlapping functions: deletion of both 5-phosphatases in mice is embryonic lethal, deletion of OCRL1 alone has no phenotype, and deletion of Inpp5b alone has only a mild phenotype (male sterility). Several of the proteins that interact with OCRL1 also bind INPP5B, for examples, inositol polyphosphate phosphatase interacting protein of 27kDa (IPIP27)A and B (also known as Ses1 and 2), and endocytic signaling adaptor APPL1. OCRL1, but not INPP5B, binds clathrin heavy chain, the plasma membrane AP2 adaptor subunit alpha-adaptin. In addition to this INPP5c domain, most proteins in this subfamily have a C-terminal RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain. Length = 292
>gnl|CDD|197308 cd09074, INPP5c, Catalytic domain of inositol polyphosphate 5-phosphatases Back     alignment and domain information
>gnl|CDD|214525 smart00128, IPPc, Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>gnl|CDD|197324 cd09090, INPP5c_ScInp51p-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Saccharomyces cerevisiae Inp51p, Inp52p, and Inp53p, and related proteins Back     alignment and domain information
>gnl|CDD|197328 cd09094, INPP5c_INPP5J-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins Back     alignment and domain information
>gnl|CDD|197323 cd09089, INPP5c_Synj, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanins Back     alignment and domain information
>gnl|CDD|197333 cd09099, INPP5c_Synj2, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 2 Back     alignment and domain information
>gnl|CDD|227698 COG5411, COG5411, Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|197332 cd09098, INPP5c_Synj1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1 Back     alignment and domain information
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>gnl|CDD|197329 cd09095, INPP5c_INPP5E-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins Back     alignment and domain information
>gnl|CDD|197335 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol 5-phosphatase-2 and related proteins Back     alignment and domain information
>gnl|CDD|197325 cd09091, INPP5c_SHIP, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and -2, and related proteins Back     alignment and domain information
>gnl|CDD|197334 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins Back     alignment and domain information
>gnl|CDD|197306 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily Back     alignment and domain information
>gnl|CDD|217520 pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 208
KOG0566|consensus 1080 100.0
PLN03191 621 Type I inositol-1,4,5-trisphosphate 5-phosphatase 100.0
smart00128310 IPPc Inositol polyphosphate phosphatase, catalytic 100.0
COG5411 460 Phosphatidylinositol 5-phosphate phosphatase [Sign 100.0
KOG0565|consensus145 99.92
PTZ00312 356 inositol-1,4,5-triphosphate 5-phosphatase; Provisi 99.48
TIGR03395283 sphingomy sphingomyelin phosphodiesterase. Members 98.85
PF03372249 Exo_endo_phos: Endonuclease/Exonuclease/phosphatas 98.6
KOG2756|consensus349 98.46
PRK11756268 exonuclease III; Provisional 98.42
PRK05421263 hypothetical protein; Provisional 98.41
PLN03144 606 Carbon catabolite repressor protein 4 homolog; Pro 98.32
KOG1976|consensus 391 98.27
COG3568259 ElsH Metal-dependent hydrolase [General function p 98.23
smart00476276 DNaseIc deoxyribonuclease I. Deoxyribonuclease I c 98.13
KOG2338|consensus 495 97.87
TIGR00195254 exoDNase_III exodeoxyribonuclease III. The model b 97.68
TIGR00633255 xth exodeoxyribonuclease III (xth). This family is 97.62
PRK13911250 exodeoxyribonuclease III; Provisional 97.35
KOG3873|consensus 422 97.17
PRK15251271 cytolethal distending toxin subunit CdtB; Provisio 97.09
PTZ00297 1452 pantothenate kinase; Provisional 97.04
COG0708261 XthA Exonuclease III [DNA replication, recombinati 96.75
COG5239 378 CCR4 mRNA deadenylase, exonuclease subunit and rel 81.37
>KOG0566|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.3e-51  Score=387.44  Aligned_cols=191  Identities=33%  Similarity=0.664  Sum_probs=181.5

Q ss_pred             hhhcccccchhccCCCccceeEEEEeeee------------------------------cccccccc-ccchhhhhccCC
Q psy11370         14 VITYQPDKSQKLNKSNKRLVKIFVGTWNY------------------------------LIPFSQEL-DLSKEAILYDRS   62 (208)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~i~v~i~TWNv------------------------------viGl~QEi-dl~~~~~~~~~~   62 (208)
                      ++..+|.+++ ++|+.+++|+||+|||||                              |||| ||+ +|+++.++..++
T Consensus       519 yv~~~L~er~-~eyt~~k~i~IfvgTfNvNG~s~~~k~~L~~WLfp~s~~~~~~~aDIyviG~-eEvVeLnag~iv~As~  596 (1080)
T KOG0566|consen  519 YVLKELRERR-SEYTEPKDISIFVGTFNVNGRSAAFKDDLSDWLFPISRGKEFSPADIYVIGF-EEVVELNAGNIVSAST  596 (1080)
T ss_pred             HHHHHHHHhh-hhhccccceEEEEEeeeccCccccchhhHHhhccccccCCcCCcCcEEEEee-hhhhhcCccceeccCh
Confidence            3455566666 999999999999999999                              9999 998 999999999999


Q ss_pred             chhHHHHHHHHHhhccCCCCeEEEEeeeeeeeEEEEEEecCCCCcceeeeeeccccc---ccCCCceeEEEEEECCeEEE
Q psy11370         63 SREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSG---DLGNKGGVAIRFELYRTGIC  139 (208)
Q Consensus        63 ~~~~~W~~~i~~~L~~~~~~Y~~v~~~~l~Gl~l~vfvr~~~~~~I~~v~~~~v~tG---~~gnKG~V~i~~~~~~~~~~  139 (208)
                      .+.+.|++.|+++|++..++|+++.+.||+|++|++|+|.++.++|++|+.++++||   +.||||||+|||.+++|+||
T Consensus       597 tk~~~Wee~i~~~Ln~~~~kYvlL~s~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~tgNKGAVAIrf~~~~TsfC  676 (1080)
T KOG0566|consen  597 TKRRFWEEKILKTLNRYKNKYVLLRSEQLVGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGATGNKGAVAIRFVYHATSFC  676 (1080)
T ss_pred             HHHHHHHHHHHHHhcCCCCceEEEehhhhheeeEEEEEcccccchhhhcccceeecccccccCCCceEEEEEEeccccEE
Confidence            999999999999999658999999999999999999999999999999999999999   88999999999999999999


Q ss_pred             EEeecCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEcccCCcCCCCCHHHHHHHHHcCCC
Q psy11370        140 FICSHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI  208 (208)
Q Consensus       140 fvn~HL~a~~~~~~~Rn~~~~~I~~~~~f~~~~~~i~~~d~vfw~GDlNyRi~~l~~~~v~~~i~~~~~  208 (208)
                      ||++|||||..++++||.||++|.++++|+. +..|.+||+|||||||||||+ |++|||++.|.++||
T Consensus       677 Fv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~-Gr~I~~HD~ifW~GDFNYRI~-l~nEEVr~~v~~~d~  743 (1080)
T KOG0566|consen  677 FVCSHLAAGQSNVEERNEDYKTIARKLRFPR-GRMIFSHDYIFWLGDFNYRID-LSNEEVRRLVRNQDL  743 (1080)
T ss_pred             EEecccccccchHhhhhhhHHHHHHhccccC-CccccCCceEEEecccceeec-CCHHHHHHHHHhccH
Confidence            9999999999999999999999999999998 788999999999999999999 999999999999875

>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0565|consensus Back     alignment and domain information
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional Back     alignment and domain information
>TIGR03395 sphingomy sphingomyelin phosphodiesterase Back     alignment and domain information
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling [] Back     alignment and domain information
>KOG2756|consensus Back     alignment and domain information
>PRK11756 exonuclease III; Provisional Back     alignment and domain information
>PRK05421 hypothetical protein; Provisional Back     alignment and domain information
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>KOG1976|consensus Back     alignment and domain information
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>smart00476 DNaseIc deoxyribonuclease I Back     alignment and domain information
>KOG2338|consensus Back     alignment and domain information
>TIGR00195 exoDNase_III exodeoxyribonuclease III Back     alignment and domain information
>TIGR00633 xth exodeoxyribonuclease III (xth) Back     alignment and domain information
>PRK13911 exodeoxyribonuclease III; Provisional Back     alignment and domain information
>KOG3873|consensus Back     alignment and domain information
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair] Back     alignment and domain information
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query208
3mtc_A 313 Crystal Structure Of Inpp5b In Complex With Phospha 1e-32
3n9v_A 313 Crystal Structure Of Inpp5b Length = 313 1e-32
1i9y_A 347 Crystal Structure Of Inositol Polyphosphate 5-Phosp 3e-22
3nr8_B 316 Crystal Structure Of Human Ship2 Length = 316 1e-10
2xsw_A 357 Crystal Structure Of Human Inpp5e Length = 357 1e-08
>pdb|3MTC|A Chain A, Crystal Structure Of Inpp5b In Complex With Phosphatidylinositol 4- Phosphate Length = 313 Back     alignment and structure 
Iteration: 1

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 110/174 (63%), Gaps = 10/174 (5%)
Query: 42  YLIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVR 101
           Y + F QELDLSKEA  +  + +E++W   +++ L      Y +V+ IR++GIM++++V+
Sbjct: 40  YCVGF-QELDLSKEAFFFHDTPKEEEWFKAVSEGLHP-DAKYAKVKLIRLVGIMLLLYVK 97
Query: 102 DSFLSQITNIDKDRMSSG---DLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNAD 158
               + I+ ++ + + +G    +GNKGGVAIRF+ + T IC + SH A+HI   E RN D
Sbjct: 98  QEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQD 157
Query: 159 FKNILNQIHFKENDKLIP-----DHDLIFWFGDLNYRFDKLSRDSVIELINRKE 207
           +K+I +++ F + D  +P     +HD+I W GDLNYR ++L  + V +LI  K+
Sbjct: 158 YKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKD 211
>pdb|3N9V|A Chain A, Crystal Structure Of Inpp5b Length = 313 Back     alignment and structure
>pdb|1I9Y|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase Domain (Ipp5c) Of Spsynaptojanin Length = 347 Back     alignment and structure
>pdb|3NR8|B Chain B, Crystal Structure Of Human Ship2 Length = 316 Back     alignment and structure
>pdb|2XSW|A Chain A, Crystal Structure Of Human Inpp5e Length = 357 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query208
3mtc_A 313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 3e-55
1i9z_A 347 Synaptojanin, phosphatidylinositol phosphate phosp 7e-51
4a9c_A 316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 4e-47
2xsw_A 357 72 kDa inositol polyphosphate 5-phosphatase; inosi 2e-43
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 1e-38
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Length = 313 Back     alignment and structure
 Score =  177 bits (450), Expect = 3e-55
 Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 33/211 (15%)

Query: 28  SNKRLVKIFVGTWN-----------------------YLIPFSQELDLSKEAILYDRSSR 64
           +  +  + F GT+N                       Y + F QELDLSKEA  +  + +
Sbjct: 3   TYIQNFRFFAGTYNVNGQSPKECLRLWLSNGIQAPDVYCVGF-QELDLSKEAFFFHDTPK 61

Query: 65  EKDWLAVITKCLETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSG---DL 121
           E++W   +++ L      Y +V+ IR++GIM++++V+    + I+ ++ + + +G    +
Sbjct: 62  EEEWFKAVSEGLHP-DAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRM 120

Query: 122 GNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFKEND-----KLIP 176
           GNKGGVAIRF+ + T IC + SH A+HI   E RN D+K+I +++ F + D       I 
Sbjct: 121 GNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYKDICSRMQFCQPDPSLPPLTIS 180

Query: 177 DHDLIFWFGDLNYRFDKLSRDSVIELINRKE 207
           +HD+I W GDLNYR ++L  + V +LI  K+
Sbjct: 181 NHDVILWLGDLNYRIEELDVEKVKKLIEEKD 211
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Length = 347 Back     alignment and structure
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Length = 316 Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Length = 357 Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Length = 282 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query208
3mtc_A 313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 100.0
4a9c_A 316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 100.0
1i9z_A 347 Synaptojanin, phosphatidylinositol phosphate phosp 100.0
2xsw_A 357 72 kDa inositol polyphosphate 5-phosphatase; inosi 100.0
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 100.0
3teb_A266 Endonuclease/exonuclease/phosphatase; PSI-biology, 99.15
4gz1_A256 Tyrosyl-DNA phosphodiesterase 2; protein-DNA compl 99.14
4fva_A256 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 99.12
4f1h_A250 Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA com 99.07
4gew_A362 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 99.06
1ako_A268 Exonuclease III; AP-endonuclease, DNA repair; 1.70 98.85
3g6s_A267 Putative endonuclease/exonuclease/phosphatase fami 98.82
3mpr_A298 Putative endonuclease/exonuclease/phosphatase FAM 98.77
3l1w_A257 Uncharacterized protein; APC29019.2, conserved pro 98.73
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 98.68
1zwx_A301 SMCL, sphingomyelinase-C; dnase1-like fold, beta-h 98.66
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 98.6
2jc4_A256 Exodeoxyribonuclease III; hydrolase, repair phosph 98.36
3ngq_A 398 CCR4-NOT transcription complex subunit 6-like; alp 98.32
1vyb_A238 ORF2 contains A reverse transcriptase domain; endo 98.3
2a40_B260 Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse 98.26
1wdu_A245 TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA 98.16
2voa_A257 AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP 98.06
2jc5_A259 Exodeoxyribonuclease; hydrolase, repair phosphodie 97.95
2o3h_A285 DNA-(apurinic or apyrimidinic site) lyase; APE, en 97.84
1hd7_A318 DNA-(apurinic or apyrimidinic site) lyase; DNA rep 97.79
2j63_A467 AP-endonuclease; base excision repair, lyase; 2.48 97.74
3g91_A265 MTH0212, exodeoxyribonuclease; double-strand speci 97.64
2ei9_A240 Non-LTR retrotransposon R1BMKS ORF2 protein; four 97.35
4b8c_D 727 Glucose-repressible alcohol dehydrogenase transcr 97.32
1sr4_B261 CDT B, cytolethal distending toxin protein B; bact 97.04
2f1n_A262 CDT B, cytolethal distending toxin subunit B; E.co 95.24
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Back     alignment and structure
Probab=100.00  E-value=1.9e-52  Score=365.32  Aligned_cols=180  Identities=38%  Similarity=0.776  Sum_probs=169.7

Q ss_pred             CCCccceeEEEEeeee-----------------------ccccccccccchhhhhccCCchhHHHHHHHHHhhccCCCCe
Q psy11370         27 KSNKRLVKIFVGTWNY-----------------------LIPFSQELDLSKEAILYDRSSREKDWLAVITKCLETLPENY   83 (208)
Q Consensus        27 ~~~~~~i~v~i~TWNv-----------------------viGl~QEidl~~~~~~~~~~~~~~~W~~~i~~~L~~~~~~Y   83 (208)
                      ||..++++|+++||||                       |||| ||+++++.++++.+++..++|.+.|.++|+ +..+|
T Consensus         2 yt~~~~~~i~v~TwNvng~~~~~~l~~wL~~~~~~pDI~viGl-QE~~l~~~~~~~~~~~~~~~W~~~i~~~L~-~~~~Y   79 (313)
T 3mtc_A            2 YTYIQNFRFFAGTYNVNGQSPKECLRLWLSNGIQAPDVYCVGF-QELDLSKEAFFFHDTPKEEEWFKAVSEGLH-PDAKY   79 (313)
T ss_dssp             CEEEEEEEEEEEEEECTTCCCCSCTHHHHSSSCCCCSEEEEEE-ECSCCSHHHHTTCCCHHHHHHHHHHHHHSC-TTSCE
T ss_pred             CceeeccEEEEEEEEcCCccCchhHHHHhcccCCCCCeEEEEE-EecccchhhhcccCcchHHHHHHHHHHhcC-CCCCE
Confidence            7888999999999999                       8999 999999999998888899999999999998 56789


Q ss_pred             EEEEeeeeeeeEEEEEEecCCCCcceeeeeeccccc---ccCCCceeEEEEEECCeEEEEEeecCCCCCCCHHHHHHHHH
Q psy11370         84 TQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSG---DLGNKGGVAIRFELYRTGICFICSHFASHINNVEARNADFK  160 (208)
Q Consensus        84 ~~v~~~~l~Gl~l~vfvr~~~~~~I~~v~~~~v~tG---~~gnKG~V~i~~~~~~~~~~fvn~HL~a~~~~~~~Rn~~~~  160 (208)
                      ++|++.+|+|++|+||+|+++.++|++|++++|+||   .+||||||++||.+++++|||||||||||++++++||+||.
T Consensus        80 ~~v~s~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~tG~~g~~GNKGaV~ir~~~~~ts~cFVnsHLaA~~~~~~~Rn~d~~  159 (313)
T 3mtc_A           80 AKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYERRNQDYK  159 (313)
T ss_dssp             EEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECSGGGTSTTSEEEEEEEEETTEEEEEEEEECCCSGGGHHHHHHHHH
T ss_pred             EEEEEechhhhhhhhhhhhhhhhhcceeEeeeecccccccccCCceEEEEEEECCcEEEEEeeccCCCchHHHHHHHHHH
Confidence            999999999999999999999999999999999999   68999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCC-----CCCCCCCceEEEEcccCCcCCCCCHHHHHHHHHcCCC
Q psy11370        161 NILNQIHFKEN-----DKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI  208 (208)
Q Consensus       161 ~I~~~~~f~~~-----~~~i~~~d~vfw~GDlNyRi~~l~~~~v~~~i~~~~~  208 (208)
                      +|++++.|..+     +..+.+||++||+||||||+++++.++++++|+++++
T Consensus       160 ~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNyRi~~~~~~~v~~~i~~~~~  212 (313)
T 3mtc_A          160 DICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDF  212 (313)
T ss_dssp             HHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCCCBCSSCHHHHHHHHHTTCH
T ss_pred             HHHHhcccCCCCCccCCccccCCceEEEeccccccccCCCHHHHHHHHhcCCH
Confidence            99999999762     3467899999999999999987899999999998864
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Back     alignment and structure
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Back     alignment and structure
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A* Back     alignment and structure
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans} Back     alignment and structure
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B* Back     alignment and structure
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A Back     alignment and structure
>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Back     alignment and structure
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Back     alignment and structure
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Back     alignment and structure
>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Back     alignment and structure
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A Back     alignment and structure
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D* Back     alignment and structure
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1 Back     alignment and structure
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus} Back     alignment and structure
>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis} Back     alignment and structure
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A Back     alignment and structure
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A Back     alignment and structure
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major} Back     alignment and structure
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A Back     alignment and structure
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori} Back     alignment and structure
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} Back     alignment and structure
>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B Back     alignment and structure
>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 208
d1i9za_ 345 d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission 3e-29
d2imqx1280 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug ( 4e-12
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 345 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  109 bits (273), Expect = 3e-29
 Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 34/219 (15%)

Query: 21  KSQKLNKSNKRLVKIFVGTWN------------------------YLIPFSQEL-DLSKE 55
           + ++   S  + VKIFV ++N                        Y++ F QE+  L+ +
Sbjct: 13  RKRENEFSEHKNVKIFVASYNLNGCSATTKLENWLFPENTPLADIYVVGF-QEIVQLTPQ 71

Query: 56  AILYDRSSREKDWLAVITKCL---ETLPENYTQVEAIRMLGIMMVIFVRDSFLSQITNID 112
            ++    ++ ++W + + + L    T    Y Q+ + +++G  ++IF ++S L  I N++
Sbjct: 72  QVISADPAKRREWESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVE 131

Query: 113 KDRMSSGDLG---NKGGVAIRFELYRTGICFICSHFASHINNVEARNADFKNILNQIHFK 169
                +G  G   NKG VAIRF+   TG+CFI SH A+   N + R+ D++ I + + F+
Sbjct: 132 GTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGYTNYDERDHDYRTIASGLRFR 191

Query: 170 ENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKEI 208
                I +HD + WFGD NYR   L+ + V+  I + ++
Sbjct: 192 RGRS-IFNHDYVVWFGDFNYRIS-LTYEEVVPCIAQGKL 228
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Length = 280 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query208
d1i9za_ 345 Synaptojanin, IPP5C domain {Fission yeast (Schizos 100.0
d2imqx1280 Salivary nitrophorin {Bedbug (Cimex lectularius) [ 99.88
d2ddra1299 Sphingomyelin phosphodiesterase C {Bacillus cereus 99.04
d1zwxa1293 Sphingomyelin phosphodiesterase C {Listeria ivanov 98.95
d1vyba_236 Endonuclease domain of LINE-1 reverse transcriptas 97.98
d1wdua_228 Endonuclease domain of TRAS1 retrotransposon (ORF2 97.97
d2f1na1250 Cytolethal distending toxin subunit B {Escherichia 97.87
d2a40b1260 Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913 97.46
d1sr4b_261 Cytolethal distending toxin subunit B {Haemophilus 97.13
d1hd7a_275 DNA repair endonuclease Hap1 {Human (Homo sapiens) 92.42
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.9e-45  Score=322.96  Aligned_cols=190  Identities=31%  Similarity=0.639  Sum_probs=170.8

Q ss_pred             hhhcccccchhccCCCccceeEEEEeeee------------------------cccccccc-ccchhhhhccCCchhHHH
Q psy11370         14 VITYQPDKSQKLNKSNKRLVKIFVGTWNY------------------------LIPFSQEL-DLSKEAILYDRSSREKDW   68 (208)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~i~v~i~TWNv------------------------viGl~QEi-dl~~~~~~~~~~~~~~~W   68 (208)
                      +++.+|.+++ ++|+..++++|+|+||||                        |||| ||+ ++++.+++.+++...++|
T Consensus         7 ~~~~~l~~r~-~~~~~~~~l~I~v~TWNv~~~~~~~~l~~~l~~~~~~~~DI~vigl-QEi~~~~~~~~~~~~~~~~~~w   84 (345)
T d1i9za_           7 YVNHELRKRE-NEFSEHKNVKIFVASYNLNGCSATTKLENWLFPENTPLADIYVVGF-QEIVQLTPQQVISADPAKRREW   84 (345)
T ss_dssp             HHHHHHHHTG-GGTEEEEEEEEEEEEEECTTCCCCSCCHHHHSCSSSCCCSEEEEEE-ECSSCCC-----CCCHHHHHHH
T ss_pred             HHHHHHHHHH-HhhcCCCceEEEEEEEcCCCccCCcchHHhhccCCCCCCCEEEEEc-ccCCccchhhhcccCchhhHHH
Confidence            6788888888 999999999999999999                        8999 998 788888888888889999


Q ss_pred             HHHHHHhhcc---CCCCeEEEEeeeeeeeEEEEEEecCCCCcceeeeeeccccc---ccCCCceeEEEEEECCeEEEEEe
Q psy11370         69 LAVITKCLET---LPENYTQVEAIRMLGIMMVIFVRDSFLSQITNIDKDRMSSG---DLGNKGGVAIRFELYRTGICFIC  142 (208)
Q Consensus        69 ~~~i~~~L~~---~~~~Y~~v~~~~l~Gl~l~vfvr~~~~~~I~~v~~~~v~tG---~~gnKG~V~i~~~~~~~~~~fvn  142 (208)
                      .+.+.++++.   .+.+|+++.+.+|+|+.|+||+|+++.+++++++++.+++|   .+||||||+++|.+++++|||||
T Consensus        85 ~~~~~~~~~~~~~~~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~~g~~gnKGaV~vr~~i~~t~l~fvn  164 (345)
T d1i9za_          85 ESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFIT  164 (345)
T ss_dssp             HHHHHHHHHHTCCSSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC----CCEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEEEecccCcEEEEEEcchhccccccceeEEEecCcCCcccCCceEEEEEEECCEEEEEEE
Confidence            9999999862   45799999999999999999999999999999999999999   67999999999999999999999


Q ss_pred             ecCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCCCCceEEEEcccCCcCCCCCHHHHHHHHHcCC
Q psy11370        143 SHFASHINNVEARNADFKNILNQIHFKENDKLIPDHDLIFWFGDLNYRFDKLSRDSVIELINRKE  207 (208)
Q Consensus       143 ~HL~a~~~~~~~Rn~~~~~I~~~~~f~~~~~~i~~~d~vfw~GDlNyRi~~l~~~~v~~~i~~~~  207 (208)
                      |||+||+++.++|+.++.+|++++.|.. ...+.++|++||+||||||++ ++.+++.+++++++
T Consensus       165 ~HL~ag~~~~~~R~~~~~~i~~~l~~~~-~~~~~~~d~v~~~GDlN~R~~-~~~~~~~~~i~~~~  227 (345)
T d1i9za_         165 SHLAAGYTNYDERDHDYRTIASGLRFRR-GRSIFNHDYVVWFGDFNYRIS-LTYEEVVPCIAQGK  227 (345)
T ss_dssp             EECCCCSSCHHHHHHHHHHHHHHCCCGG-GCCTTSSSEEEEEEECCCCBS-SCHHHHHHHHHTTC
T ss_pred             ecccCcccchHHHHHHHHHHHHhhcccc-ccccccCceeEEecccccccc-CchhhhHhhhhccc
Confidence            9999999999999999999999999876 566788999999999999999 99999999999875
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Back     information, alignment and structure
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]} Back     information, alignment and structure
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]} Back     information, alignment and structure
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure