Psyllid ID: psy11396

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------83
Protein Sequence
MKSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNSKIINDTISYDNSKKLN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHccccHHHHHHHHccccccccccccccHHHHHcccccccccccccccccccEEEEEccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccHHHHHcccccccccccccccccccccccHHHccccccccHHHHHHcHHHHHHHHHHHHHHHcccccEEEEccccEEEcHHHHHHHHHccccccccccccccccccccccccEEEEEEEEcHHHHHHcccEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccccccEEEccccccccccHHHHHHHHHHHcccccccccEEEccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccccccccccccccEEEEEcccccccccEEEEEcccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccEEEEEEccHHHHHccccHHHHHHHHcccccccccccccccccccccEEEcccHHHHHHHHHccccccccccccccccccccccccccccccccEEccccccccccHHHHcccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHcccccccEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHccccccccEEEcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHcccccEcccccccccHHHHccccccccccEEEEcccccccHHcccHHHccccHHHHHHccHHHHHHHHHHHHHHHHccccHHHccccccEEEEEEccccHHHHccccccccEEEEcccHHHHHHccEEEEEcccccEEEEccccHHHHHHHHHHHHHHHcccccEEEEccEEEEcccHHHHHHHHHccccccccccccEcccccEcEccEEEEEEEEEHHHHHHccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccHHHcccEEccccccHHHHHHHHHHHHHHHcccccccccEEEEEcHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccccccccEEEEEEccccccccEEEEEcccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcccccccccHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHccccEEcccEEcccccccc
Coil and Loop (DISEMBL)
mkskklksknlsinnddfdksinnddidkSIKKNNSKiindtisydnskklksknlsinnddfdksinnddidkSIKKNNSKiindtisydnskklksknlsinnddfdksinnddiaiigisgqfpkannVKKFWNNLligrncvskipstrwiiddfydsdknAIGKTICkkmgsledieifdplffnispseaeymdpqqrLFLQNCWTciedagynpfslsgslcgVFVGCavsdynklitdpkmYNAYALMGESVSILPARVSYFLNLqgpclaidTACSSSLVAIAHACDSlilgnskialaggvyiintpdihikmsksgmlspdghcysfdqrangfvpgegVGVLMLKKLKdakkdgddiyciikgwgvnqdgktngitapntkSQIRLQTKIYKkfninpndIQLLEahgtgtklgdpiEFEALCESFNkfsyhknfcalgsvksnighsataAGVIGMIKIILSLkhkvlpptinynilnehiklenspffintkckswDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKnnenidkfinnlpifmvfplSAKNLSQLLIYAKLICNYIskdlknstvVKGITDAFSYINSSVQYKVIIITGYEnyfacggtkeGLLKIQKGIsrftdeksycmplyckipVIAAMQGHAIGAGWAMGLFCdytifseesvyqspymrygftpgagstlifpQRFGKILSREILFTasefkgkelkergismpvlprkQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHEltmhdytfvnnpsviTNIERYFDKSIKKNNSKIINdtisydnskkln
Flexible Loop (DISEMBL)
mkskklksknlsinnddfdksinnddidksikknnskiindtisydnskklksknlsinnddfdksinnddidksikknnskiindtisydnskklkskNLSINNDDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIgrncvskipstrWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKgwgvnqdgktngitapntksqIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHiklenspffinTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTasefkgkelkergismpvlprKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKsikknnskiindtisydnskkln
Low Complexity Region (SEG)
MkskklksknlsinnddfdksinnddidksikknnskiindtisYDnskklksknlsinnddfdksinnddidksikknnskiindtisYDnskklksknlsinnDDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVlmlkklkdakkdgddIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYslklakklsllskkelelqkkYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDksikknnskiinDTISYDNSKKLN
Disordered region (IsUnstruct)
*************************************************************************************************************KSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNSKIIN************
Disordered Region (DISOPRED)
****************DFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKS**************************************************IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM********************VFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ*****************CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITN******************************
Disordered Region (DISEMBL)
********KNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNSKIINDTISYDNSKKLN
Disordered Region (DISPRO)
*******SKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLK***************NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK************PIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ****************YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNSKIINDTISYDN*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNSKIINDTISYDNSKKLN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	829	2.2.26 [Sep-21-2011]
Q05470	4538	Polyketide synthase PksL	yes	N/A	0.557	0.101	0.503	1e-131
O31782	5488	Polyketide synthase PksN	no	N/A	0.620	0.093	0.404	1e-109
P40872	4262	Polyketide synthase PksM	no	N/A	0.559	0.108	0.413	1e-107
P40806	5043	Polyketide synthase PksJ	no	N/A	0.546	0.089	0.425	1e-106
Q7TXL9	1538	Phthiocerol/phenolphthioc	yes	N/A	0.515	0.277	0.419	1e-102
Q10978	1538	Phthiocerol synthesis pol	yes	N/A	0.515	0.277	0.419	1e-102
Q9R9J1	3971	Mycosubtilin synthase sub	no	N/A	0.560	0.117	0.417	2e-96
Q7TXK8	2112	Phenolphthiocerol synthes	no	N/A	0.506	0.198	0.397	5e-95
P96284	496	Putative inactive phenolp	no	N/A	0.506	0.846	0.397	6e-95
Q02251	2111	Mycocerosic acid synthase	no	N/A	0.557	0.218	0.368	3e-94

>sp|Q05470|PKSL_BACSU Polyketide synthase PksL OS=Bacillus subtilis (strain 168) GN=pksL PE=1 SV=3

 Score =  470 bits (1210), Expect = e-131,   Method: Composition-based stats.
 Identities = 237/471 (50%), Positives = 319/471 (67%), Gaps = 9/471 (1%)

Query: 115  DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
            D IAI+G+SG++P A NV+++W+NL+  RN +  IP++RW +D +YD   N  GK  CK 
Sbjct: 2874 DAIAIVGMSGRYPGARNVREYWDNLVHARNAIRDIPTSRWDVDKYYDPVLNKKGKVYCKS 2933

Query: 175  MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
            MG L+DIE FDPLFFNI PSEAE MDPQ R+FLQ  +   EDAGYN  +L+   CGV++G
Sbjct: 2934 MGMLDDIEHFDPLFFNIPPSEAELMDPQHRIFLQEGYKAFEDAGYNARTLNEKKCGVYLG 2993

Query: 235  CAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
               ++Y  ++      NA    G S +I  AR+ YFLNL+GP + IDTACSSSLV    A
Sbjct: 2994 IMSNEYGVMLNRQSRANA---TGNSFAIAAARIPYFLNLKGPAIPIDTACSSSLVGTHLA 3050

Query: 295  CDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVL 354
              +LI     +AL GGV +  TP+ ++ M ++GMLSPDG C +FD  ANGFVPGEG G L
Sbjct: 3051 RQALINKEIDMALVGGVSLYLTPESYMSMCEAGMLSPDGQCKAFDNGANGFVPGEGAGAL 3110

Query: 355  MLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQ 414
            +LK+LKDA+ D D IY II G G+NQDGKTNGITAP+ KSQ+ L+  IY+ + I+P  I 
Sbjct: 3111 VLKRLKDAEADRDHIYGIIIGSGINQDGKTNGITAPSAKSQMDLERDIYETYGIHPESIS 3170

Query: 415  LLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL 474
             +E HGTGTK GDPIE EAL   F + +  K FCA+GSVKSNIGH++ AAGV G+ K++L
Sbjct: 3171 YVEMHGTGTKQGDPIELEALSTVFQEKTDKKQFCAIGSVKSNIGHTSAAAGVAGVQKVLL 3230

Query: 475  SLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHI 534
             + HK L PT+N+   NEH + E+SP ++NT+ K W+  + K R A ++SFG+SGTNAHI
Sbjct: 3231 CMNHKTLVPTLNFTTPNEHFEFEHSPLYVNTELKPWETADGKPRRACVSSFGYSGTNAHI 3290

Query: 535  VLME--KIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKD 583
            V+ E    K N+ + K   +     +F LSAK   QL  YA+ + ++++ +
Sbjct: 3291 VIEEYQPEKRNDRLTKQHRS----ALFVLSAKKEKQLKAYAEAMKDFVTSN 3337

Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.
Bacillus subtilis (strain 168) (taxid: 224308)

>sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3

 Score =  396 bits (1018), Expect = e-109,   Method: Composition-based stats.
 Identities = 219/542 (40%), Positives = 316/542 (58%), Gaps = 28/542 (5%)

Query: 115  DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
            + IAI+GISG FP A +V+ +WN L  G++C+++IP  RW   ++       + KT  K 
Sbjct: 2577 EPIAIVGISGIFPMAKDVEAYWNILKEGKDCMTEIPKDRWDWREYEGDPAKEVNKTNVKW 2636

Query: 175  MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
             G ++ I  FDPLFF ISP EAE M+PQQRL L   W  IEDAGY+   LSG+  GVF+G
Sbjct: 2637 GGFIDGIADFDPLFFGISPREAEQMEPQQRLLLTYAWKAIEDAGYSAKRLSGTKTGVFIG 2696

Query: 235  CAVSDYNKLITDPK-MYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
               + Y+ L++         A    S S+ P RVSYFLNL GP   +DTACSSSLVAI H
Sbjct: 2697 TGNTGYSSLLSKANSAIEGSAAANTSPSVGPNRVSYFLNLHGPSEPVDTACSSSLVAIHH 2756

Query: 294  ACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353
            A  S+  G   +ALAGGV  I  P+++I   K+G LS +G C +F  +A+GF  GEG G+
Sbjct: 2757 AISSIEEGTCDMALAGGVNTIILPEVYISFDKAGALSKEGKCKTFSNQADGFAHGEGAGI 2816

Query: 354  LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDI 413
            L LKKLK A++ GD IY +IKG  +N  G+   +T PN K+Q  +    Y+K  I+P  +
Sbjct: 2817 LFLKKLKAAEEAGDHIYGVIKGSAINHGGRAASLTTPNPKAQADVIQSAYQKAGIDPKTV 2876

Query: 414  QLLEAHGTGTKLGDPIEFEALCESFNKFSYHKN------FCALGSVKSNIGHSATAAGVI 467
              +EAHGTGT+LGDP+E   L  +F     ++       +C LGSVK+NIGH + AAG  
Sbjct: 2877 TYIEAHGTGTELGDPVEINGLKSAFKALGVNEGDTSANPYCGLGSVKTNIGHLSLAAGAA 2936

Query: 468  GMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD-IKNKK----KRMAAI 522
            G+IKI+L LKHK L  +++   +N +I+L+NSPF+I  + + W  +KN++     R A +
Sbjct: 2937 GVIKILLQLKHKTLVKSLHCENVNPYIQLKNSPFYIVRETEEWKALKNEQGEELPRRAGV 2996

Query: 523  NSFGFSGTNAHIVLMEKI--KNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYI 580
            +SFG  G NAH+++ E I   ++ENI       P   +F LSAKN ++L  +A+ + + +
Sbjct: 2997 SSFGIGGVNAHVIIEEYIPEASDENIPSIAPEHP--GIFVLSAKNEARLKEHAQQLADAL 3054

Query: 581  SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
             K   +   +  I         +++ ++ II+G             +  +QK +  F  E
Sbjct: 3055 DKQTYSDVNLARIAYTLQAGRDAMEERLGIISG------------SIEDLQKKLKDFAAE 3102

Query: 641  KS 642
            KS
Sbjct: 3103 KS 3104

Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P40872|PKSM_BACSU Polyketide synthase PksM OS=Bacillus subtilis (strain 168) GN=pksM PE=1 SV=4

 Score =  389 bits (1000), Expect = e-107,   Method: Composition-based stats.
 Identities = 202/489 (41%), Positives = 302/489 (61%), Gaps = 25/489 (5%)

Query: 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSD--KNAIGKTIC 172
           +DIAIIG++G++PKA N+++FW  L  G +C+++IP++RW   ++ +SD   +  GK + 
Sbjct: 394 EDIAIIGMAGRYPKAKNIQEFWEQLKAGTDCITEIPNSRW---EWKESDGLDSPAGKPLS 450

Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSG------ 226
           K  G +E+ + FDP FF ISP EAE MDPQ+RLFL+ CW  IEDAGY P +++       
Sbjct: 451 KWGGFIEEADCFDPQFFRISPREAEMMDPQERLFLETCWEAIEDAGYTPETIASPQGENK 510

Query: 227 -SLCGVFVGCAVSDYNKLITDP-KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTAC 284
               GVF G    DY+ +  +    +N + L      I   RVSY+ N  GP +A+DT C
Sbjct: 511 RQHVGVFAGVMHKDYSLIGAEALSEHNPFPLSLNYAQI-ANRVSYYCNFHGPSMAVDTVC 569

Query: 285 SSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANG 344
           SSSL A+  A +S+  G  + ALAGGV +   P  +I     GM S DG+C++F +  +G
Sbjct: 570 SSSLTAVHLAIESIRNGECEAALAGGVNLSLHPAKYISYGSVGMHSSDGYCHTFGKGGDG 629

Query: 345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
           +V GEGVG ++LK L+ A++DGD IY +IKG  +N  GK +GIT P+  +Q  +     +
Sbjct: 630 YVSGEGVGTVLLKPLRKAEQDGDRIYAVIKGSAINHVGKVSGITVPSPVAQADVIEACLE 689

Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
           K  I+P  I  +EAHGTGT LGDPIE + L ++F++ +  K FC++GSVKSNIGH+  AA
Sbjct: 690 KTGIDPRTISYVEAHGTGTSLGDPIEVQGLVKAFSRNTQDKQFCSIGSVKSNIGHAEAAA 749

Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD--------IKNKK 516
           G+ G+ K +L L HK L P+++   LN ++KL+ +PFF+  + K W+        +    
Sbjct: 750 GISGLTKTVLQLHHKTLVPSLHSEELNPYLKLDQTPFFVQHETKEWEQPSFTENGVDVTY 809

Query: 517 KRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFIN-NLPIFMVFPLSAKNLSQLLIYAKL 575
            R A ++SFG SG+NAH++L E I    + +  +  N  I  V PLSA+N  +L  YA  
Sbjct: 810 PRRAGLSSFGASGSNAHLILEEYIPAESHSETILTKNEEI--VIPLSARNKDRLQAYALK 867

Query: 576 ICNYISKDL 584
           + +++S+D+
Sbjct: 868 LLDFLSEDV 876

Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ PE=1 SV=3

 Score =  387 bits (993), Expect = e-106,   Method: Composition-based stats.
 Identities = 201/472 (42%), Positives = 296/472 (62%), Gaps = 19/472 (4%)

Query: 115  DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
            + +AI+GISG+FP A ++ +FW NL  G++ ++++P  RW   + Y +    + KT  K 
Sbjct: 3340 EPVAIVGISGRFPGAMDIDEFWKNLEEGKDSITEVPKDRWDWREHYGNPDTDVNKTDIKW 3399

Query: 175  MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
             G ++ +  FDPLFF ISP EA+Y+DPQQRL +   W  +EDAG +P SLSG+  G+F+G
Sbjct: 3400 GGFIDGVAEFDPLFFGISPREADYVDPQQRLLMTYVWKALEDAGCSPQSLSGTGTGIFIG 3459

Query: 235  CAVSDYNKLITDPKM-YNAYALMGESV-SILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
               + Y  L     +    +A  G  + S+ P R+SYFLN+ GP   ++TACSSSLVAI 
Sbjct: 3460 TGNTGYKDLFHRANLPIEGHAATGHMIPSVGPNRMSYFLNIHGPSEPVETACSSSLVAIH 3519

Query: 293  HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
             A  ++  G+ ++A+AGGV  I T + HI  SK+GMLS DG C +F   ANG+V GEGVG
Sbjct: 3520 RAVTAMQNGDCEMAIAGGVNTILTEEAHISYSKAGMLSTDGRCKTFSADANGYVRGEGVG 3579

Query: 353  VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
            ++MLKKL+DA++DG+ IY +I+G   N  G+ N +T+PN K+Q  L  + Y++ +I+P+ 
Sbjct: 3580 MVMLKKLEDAERDGNHIYGVIRGTAENHGGRANTLTSPNPKAQADLLVRAYRQADIDPST 3639

Query: 413  IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHK---------NFCALGSVKSNIGHSATA 463
            +  +EAHGTGT+LGDPIE   L  +F + S  +         + C +GSVKSNIGH   A
Sbjct: 3640 VTYIEAHGTGTELGDPIEINGLKAAFKELSNMRGESQPDVPDHRCGIGSVKSNIGHLELA 3699

Query: 464  AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDI-----KNKKKR 518
            AG+ G+IK++L +KHK L  +++   LN +++L +SPF+I  + + W        N+  R
Sbjct: 3700 AGISGLIKVLLQMKHKTLVKSLHCETLNPYLQLTDSPFYIVQEKQEWKSVTDRDGNELPR 3759

Query: 519  MAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLL 570
             A I+SFG  G NAHIV+ E +    N +      P  +V  LSAKN S+L+
Sbjct: 3760 RAGISSFGIGGVNAHIVIEEYMP-KANSEHTATEQPNVIV--LSAKNKSRLI 3808

Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q7TXL9|PPSB_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsB PE=1 SV=1

 Score =  372 bits (955), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/436 (41%), Positives = 271/436 (62%), Gaps = 9/436 (2%)

Query: 106 DDFDKSIN---NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYD 161
           D+FD+       + +A++GI  +FP   +  + FW+ L+ GRN +S +P+ RW  + FY 
Sbjct: 22  DEFDRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYH 81

Query: 162 SDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP 221
            D    G+   K  G + D+  FD  FF I+P EA  MDPQQR+ L+  W  +E AG  P
Sbjct: 82  PDPLTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPP 141

Query: 222 FSLSGSLCGVFVGCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAI 280
            SL G+   V +G   ++Y  ++   P+  +AY+  G + SI   R+SY L L+GP +A+
Sbjct: 142 DSLGGTRTAVMMGVYFNEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAV 201

Query: 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQ 340
           DTACSSSLVA+  AC SL L  + +ALAGGV I   P+  I +S  G+LSP G C +FD 
Sbjct: 202 DTACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDA 261

Query: 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQT 400
            A+GFV GEG GV++LK+L DA +DGD +  +++G  VNQDG++NG+TAPNT +Q  +  
Sbjct: 262 AADGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIA 321

Query: 401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS 460
              +  ++ P+ +  +EAHGTGT LGDPIEFEAL  ++    +  + CALG+VK+NIGH 
Sbjct: 322 DALRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHL 378

Query: 461 ATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520
             AAG+ G IK  L+++   +PP ++++  N  I   ++ FF+ T+   W      +R A
Sbjct: 379 EAAAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTAEGPRR-A 437

Query: 521 AINSFGFSGTNAHIVL 536
           A++SFG  GTNAH+++
Sbjct: 438 AVSSFGLGGTNAHVII 453

Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively.

Mycobacterium bovis (taxid: 1765)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q10978|PPSB_MYCTU Phthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium tuberculosis GN=ppsB PE=3 SV=2

 Score =  372 bits (955), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/436 (41%), Positives = 271/436 (62%), Gaps = 9/436 (2%)

Query: 106 DDFDKSIN---NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYD 161
           D+FD+       + +A++GI  +FP   +  + FW+ L+ GRN +S +P+ RW  + FY 
Sbjct: 22  DEFDRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYH 81

Query: 162 SDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP 221
            D    G+   K  G + D+  FD  FF I+P EA  MDPQQR+ L+  W  +E AG  P
Sbjct: 82  PDPLTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPP 141

Query: 222 FSLSGSLCGVFVGCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAI 280
            SL G+   V +G   ++Y  ++   P+  +AY+  G + SI   R+SY L L+GP +A+
Sbjct: 142 DSLGGTRTAVMMGVYFNEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAV 201

Query: 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQ 340
           DTACSSSLVA+  AC SL L  + +ALAGGV I   P+  I +S  G+LSP G C +FD 
Sbjct: 202 DTACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDA 261

Query: 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQT 400
            A+GFV GEG GV++LK+L DA +DGD +  +++G  VNQDG++NG+TAPNT +Q  +  
Sbjct: 262 AADGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIA 321

Query: 401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS 460
              +  ++ P+ +  +EAHGTGT LGDPIEFEAL  ++    +  + CALG+VK+NIGH 
Sbjct: 322 DALRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHL 378

Query: 461 ATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520
             AAG+ G IK  L+++   +PP ++++  N  I   ++ FF+ T+   W      +R A
Sbjct: 379 EAAAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTAEGPRR-A 437

Query: 521 AINSFGFSGTNAHIVL 536
           A++SFG  GTNAH+++
Sbjct: 438 AVSSFGLGGTNAHVII 453

Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives.

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q9R9J1|MYCA_BACIU Mycosubtilin synthase subunit A OS=Bacillus subtilis GN=mycA PE=3 SV=1

 Score =  354 bits (908), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 201/481 (41%), Positives = 296/481 (61%), Gaps = 16/481 (3%)

Query: 113  NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIID--DFYDSDKNAIGKT 170
            ++ DIAIIG+S   P A+N   FW+ L  G + + + P+ R + D  D+  S K+   + 
Sbjct: 668  SSKDIAIIGMSLNVPGASNKSDFWHLLENGEHGIREYPAPR-VKDAIDYLRSIKSERNEK 726

Query: 171  ICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCG 230
               + G L++I+ FD  FF ++P  A++MDP QRLFLQ+ W  IEDAGY   ++SGS  G
Sbjct: 727  QFVRGGYLDEIDRFDYSFFGLAPKTAKFMDPNQRLFLQSAWHAIEDAGYAGDTISGSQLG 786

Query: 231  VFVGCAVS--DYNKLITD--PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSS 286
            V+VG +    DY +L++   P+  + Y ++G   S+L +R++YFLNL+GP + +DTACSS
Sbjct: 787  VYVGYSKVGYDYERLLSANYPEELHHY-IVGNLPSVLASRIAYFLNLKGPAVTVDTACSS 845

Query: 287  SLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFV 346
            SLVA+  AC +L+ G+ ++ALAGG+     P + I +    M S DG   +F + ++G  
Sbjct: 846  SLVAVHMACKALLTGDCEMALAGGIRTSLLP-MRIGLD---MESSDGLTKTFSKDSDGTG 901

Query: 347  PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKF 406
             GEGV  ++LK L+ A +DGD IY +IKG  +NQDG T GITAP+  +Q  +    +K  
Sbjct: 902  SGEGVAAVLLKPLQAAIRDGDHIYGVIKGSAINQDGTTVGITAPSPAAQTEVIEMAWKDA 961

Query: 407  NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGV 466
             I P  +  +EAHGTGTKLGDP+EF  LC++F K +  K FCA+GSVK+NIGH   AAG+
Sbjct: 962  GIAPETLSFIEAHGTGTKLGDPVEFNGLCKAFEKVTEKKQFCAIGSVKANIGHLFEAAGI 1021

Query: 467  IGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFG 526
            +G+IK  L L HK +PP  ++N  N  I   +SPF++N +   +  +++  R   I+SFG
Sbjct: 1022 VGLIKSALMLNHKKIPPLAHFNKPNPLIPFHSSPFYVNQEVMDFTPEDRPLR-GGISSFG 1080

Query: 527  FSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKN 586
            FSGTNAH+VL E    +E   +  N+  +F+   LSA   + L         YIS D ++
Sbjct: 1081 FSGTNAHVVLEEYTPESEYAPEDGNDPHLFV---LSAHTEASLYELTHQYRQYISDDSQS 1137

Query: 587  S 587
            S
Sbjct: 1138 S 1138

This protein is a multifunctional enzyme, able to activate a long chain fatty acid and link it with the amino acid Asn as part of the synthesis of mycosubtilin. The activation sites consist of individual domains.

Bacillus subtilis (taxid: 1423)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q7TXK8|MSL7_MYCBO Phenolphthiocerol synthesis polyketide synthase type I Pks15/1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pks15/1 PE=1 SV=1

 Score =  349 bits (896), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 169/425 (39%), Positives = 255/425 (60%), Gaps = 5/425 (1%)

Query: 114 NDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTI 171
            + +A++GI  +FP   +     W+ +  GR+ VS+ P+ R W ++  YD D +A GKT 
Sbjct: 46  TEPVAVVGIGCRFPGGVDGPDGLWDVVSAGRDVVSEFPTDRGWDVEGLYDPDPDAEGKTY 105

Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGV 231
            +    L+D   FD  FF I+PSE   MDPQQRL L+  W  +E AG +P SL GS  GV
Sbjct: 106 TRWGAFLDDATGFDAGFFGIAPSEVLAMDPQQRLMLEVSWEALEHAGIDPLSLRGSATGV 165

Query: 232 FVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
           + G   + Y     D      Y L G S+S+   RVSY L LQGP +++DTACSSSLVAI
Sbjct: 166 YTGIFAASYGN--RDTGGLQGYGLTGTSISVASGRVSYVLGLQGPAVSVDTACSSSLVAI 223

Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
             A  SL  G   +ALAGGV ++  P I +  S+   L+ DG C +F   A+G   GEG 
Sbjct: 224 HWAMSSLRSGECDLALAGGVTVMGLPSIFVGFSRQRGLAADGRCKAFAAAADGTGWGEGA 283

Query: 352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
           GV++L++L DA++ G  +  +++G  VNQDG +NG+TAPN  +Q R+         ++  
Sbjct: 284 GVVVLERLSDARRLGHSVLAVVRGSAVNQDGASNGLTAPNGLAQQRVIQAALANAGLSAA 343

Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
           D+ ++EAHGT T LGDPIE +AL  ++ +    +    +GS+KSN+GH+  AAGV G+IK
Sbjct: 344 DVDVVEAHGTATTLGDPIEAQALLSTYGQGRPAEQPLWVGSIKSNMGHTQAAAGVAGVIK 403

Query: 472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
           ++ +++H V+P T++ +  +  +   +    + T+ + W +  + +R AA++SFG SGTN
Sbjct: 404 MVQAMRHGVMPATLHVDEPSPRVDWTSGAVSVLTEAREWSVDGRPRR-AAVSSFGISGTN 462

Query: 532 AHIVL 536
           AH++L
Sbjct: 463 AHLIL 467

Catalyzes the elongation by iterative transfer of p-hydroxybenzoyl group from FadD22 (pHBA-S-FAdD22) to form p-hydroxyphenylalkanoate (pHPA) intermediates during phenolphthiocerol (PPOL) biosynthesis. PPOL is an important intermediate in the biosynthesis of phenolic glycolipid (mycosid B).

Mycobacterium bovis (taxid: 1765)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P96284|PKS15_MYCTU Putative inactive phenolphthiocerol synthesis polyketide synthase type I Pks15 OS=Mycobacterium tuberculosis GN=pks15 PE=4 SV=2

 Score =  349 bits (895), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 169/425 (39%), Positives = 255/425 (60%), Gaps = 5/425 (1%)

Query: 114 NDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTI 171
            + +A++GI  +FP   +     W+ +  GR+ VS+ P+ R W ++  YD D +A GKT 
Sbjct: 46  TEPVAVVGIGCRFPGGVDGPDGLWDVVSAGRDVVSEFPTDRGWDVEGLYDPDPDAEGKTY 105

Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGV 231
            +    L+D   FD  FF I+PSE   MDPQQRL L+  W  +E AG +P SL GS  GV
Sbjct: 106 TRWGAFLDDATGFDAGFFGIAPSEVLAMDPQQRLMLEVSWEALEHAGIDPLSLRGSATGV 165

Query: 232 FVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
           + G   + Y     D      Y L G S+S+   RVSY L LQGP +++DTACSSSLVAI
Sbjct: 166 YTGIFAASYGN--RDTGGLQGYGLTGTSISVASGRVSYVLGLQGPAVSVDTACSSSLVAI 223

Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
             A  SL  G   +ALAGGV ++  P I +  S+   L+ DG C +F   A+G   GEG 
Sbjct: 224 HWAMSSLRSGECDLALAGGVTVMGLPSIFVGFSRQRGLAADGRCKAFAAAADGTGWGEGA 283

Query: 352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
           GV++L++L DA++ G  +  +++G  VNQDG +NG+TAPN  +Q R+         ++  
Sbjct: 284 GVVVLERLSDARRLGHSVLAVVRGSAVNQDGASNGLTAPNGLAQQRVIQVALANAGLSAA 343

Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
           D+ ++EAHGT T LGDPIE +AL  ++ +    +    +GS+KSN+GH+  AAGV G+IK
Sbjct: 344 DVDVVEAHGTATTLGDPIEAQALLSTYGQGGPAEQPLWVGSIKSNMGHTQAAAGVAGVIK 403

Query: 472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
           ++ +++H V+P T++ +  +  +   +    + T+ + W +  + +R AA++SFG SGTN
Sbjct: 404 MVQAMRHGVMPATLHVDEPSPRVDWTSGAVSVLTEAREWSVDGRPRR-AAVSSFGISGTN 462

Query: 532 AHIVL 536
           AH++L
Sbjct: 463 AHLIL 467

Mycobacterium tuberculosis (taxid: 1773)

>sp|Q02251|MCAS_MYCBO Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=mas PE=1 SV=2

 Score =  347 bits (889), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 173/470 (36%), Positives = 266/470 (56%), Gaps = 8/470 (1%)

Query: 117 IAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKM 175
           +A+IG+  + P   N+  K W +LL G + V++IP  RW  DD+YD +    G+++ +  
Sbjct: 8   VAVIGMGCRLPGGINSPDKLWESLLRGDDLVTEIPPDRWDADDYYDPEPGVPGRSVSRWG 67

Query: 176 GSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGC 235
           G L+D+  FD  FF IS  EA  +DPQQRL L+  W  IE AG +P SL+GS   VF G 
Sbjct: 68  GFLDDVAGFDAEFFGISEREATSIDPQQRLLLETSWEAIEHAGLDPASLAGSSTAVFTGL 127

Query: 236 AVSDYNKLITDPK-MYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
              DY  L T    + + Y + G + S+   R+++ L L GP +  DTACSS L+A+  A
Sbjct: 128 THEDYLVLTTTAGGLASPYVVTGLNNSVASGRIAHTLGLHGPAMTFDTACSSGLMAVHLA 187

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVL 354
           C SL  G + +ALAGG  ++  P   +  S  GMLS  G C+SFD  A+GFV  EG  ++
Sbjct: 188 CRSLHDGEADLALAGGCAVLLEPHACVAASAQGMLSSTGRCHSFDADADGFVRSEGCAMV 247

Query: 355 MLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQ 414
           +LK+L DA +DG+ I+ +++G   NQDG+T  +T P+  +Q+ +         + P  + 
Sbjct: 248 LLKRLPDALRDGNRIFAVVRGTATNQDGRTETLTMPSEDAQVAVYRAALAAAGVQPETVG 307

Query: 415 LLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL 474
           ++EAHGTGT +GDPIE+ +L   +   +     CALGS KSN+GHS  +AG +G+IK IL
Sbjct: 308 VVEAHGTGTPIGDPIEYRSLARVYGAGTP----CALGSAKSNMGHSTASAGTVGLIKAIL 363

Query: 475 SLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN-KKKRMAAINSFGFSGTNAH 533
           SL+H V+PP +++N L + +    +  F+      W   N    +  A++SFG SGTN H
Sbjct: 364 SLRHGVVPPLLHFNRLPDELSDVETGLFVPQAVTPWPNGNDHTPKRVAVSSFGMSGTNVH 423

Query: 534 IVLMEKIKNNENIDKFINNLPIF-MVFPLSAKNLSQLLIYAKLICNYISK 582
            ++ E        +    +  +   +F LS+ +   L   A+ +  ++ +
Sbjct: 424 AIVEEAPAEASAPESSPGDAEVGPRLFMLSSTSSDALRQTARQLATWVEE 473

Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids.

Mycobacterium bovis (taxid: 1765)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 1

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	829
38374225	4881	putative type I polyketide synthase [sym	0.559	0.095	0.652	0.0
281415834	5320	trans-AT polyketide synthase [Nostoc sp.	0.563	0.087	0.622	0.0
56553464	4376	OnnB [symbiont bacterium of Theonella sw	0.571	0.108	0.594	1e-173
310642830	4465	polyketide synthase [Paenibacillus polym	0.616	0.114	0.557	1e-169
163756752	4058	polyketide synthase [Kordia algicida OT-	0.564	0.115	0.592	1e-168
163756753	3274	polyketide synthase of type I [Kordia al	0.569	0.144	0.569	1e-167
308069766	4466	polyketide synthase module containing pr	0.615	0.114	0.547	1e-165
427414901	4309	PfaD family protein [Leptolyngbya sp. PC	0.513	0.098	0.620	1e-165
441497519	5613	Long-chain-fatty-acid--CoA ligase [Fulvi	0.551	0.081	0.594	1e-159
441497520	4820	Malonyl CoA-acyl carrier protein transac	0.542	0.093	0.578	1e-159

>gi|38374225|gb|AAR19304.1| putative type I polyketide synthase [symbiont bacterium of Paederus fuscipes]

 Score =  672 bits (1733), Expect = 0.0,   Method: Composition-based stats.
 Identities = 306/469 (65%), Positives = 383/469 (81%), Gaps = 5/469 (1%)

Query: 117  IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
            IAIIG+SGQFP+A +VK FW N++ GR+CVS+IP+ RW I+++YDSD+NA GKT+C++MG
Sbjct: 3404 IAIIGMSGQFPQAPDVKAFWRNIVEGRDCVSEIPAERWSIEEYYDSDRNADGKTVCRRMG 3463

Query: 177  SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            +L D E+FDPLFFNISPSEAE MDPQQRLFL N W CIEDAGY+P  LSGSLCG+FVGCA
Sbjct: 3464 ALSDREVFDPLFFNISPSEAELMDPQQRLFLLNSWHCIEDAGYDPTRLSGSLCGIFVGCA 3523

Query: 237  VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
             SDY++L  + +   A  L+GESV++LPARV+Y+LNLQGPCLAIDTACS+SLVA+A ACD
Sbjct: 3524 ASDYSQL-AESQTQTAQGLLGESVAMLPARVAYYLNLQGPCLAIDTACSASLVALASACD 3582

Query: 297  SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356
            SL+LGNS +ALAGGVY+IN PDI +KMSK+GMLSPDG C+SFDQR NGFVPGEGVGVLML
Sbjct: 3583 SLVLGNSDVALAGGVYVINGPDIQVKMSKAGMLSPDGRCFSFDQRGNGFVPGEGVGVLML 3642

Query: 357  KKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
            K+L+ A++DGDDIY +I+GWGVNQDGKTNGITAPN +SQ RL+T IY+KF INP  IQL+
Sbjct: 3643 KRLEQAQRDGDDIYAVIRGWGVNQDGKTNGITAPNQESQTRLETGIYRKFGINPEHIQLV 3702

Query: 417  EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
            EAHGT T+LGDPIE EAL ESF +FS  K +CALGSVKSNIGH ATAAGV  +IK  L+L
Sbjct: 3703 EAHGTATRLGDPIEVEALSESFRRFSDRKQYCALGSVKSNIGHLATAAGVTSVIKSALAL 3762

Query: 477  KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            +H++LPPTIN+  LNEHI+L++SPF+INT+ + W++     R  A++SFGFSGTNAH+VL
Sbjct: 3763 QHRILPPTINFQTLNEHIRLQDSPFYINTERRLWEMPQGHSRQVAVSSFGFSGTNAHMVL 3822

Query: 537  MEKIKNNENIDKFINNLP--IFMVFPLSAKNLSQLLIYAKLICNYISKD 583
             E        D     +P    ++ PLSA++  QL  YA+ +C+Y++ +
Sbjct: 3823 EEPEPRAFVEDD--TGVPDGDAILLPLSARSEEQLSRYAQAVCDYLADE 3869

Source: symbiont bacterium of Paederus fuscipes

Species: symbiont bacterium of Paederus fuscipes

Superkingdom: Bacteria

>gi|281415834|gb|ADA69237.1| trans-AT polyketide synthase [Nostoc sp. 'Peltigera membranacea cyanobiont']

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 294/472 (62%), Positives = 380/472 (80%), Gaps = 5/472 (1%)

Query: 111  SINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKT 170
            S ++D IA++G++G+FPKA N+ +FW N+  GRNCVS+I S RW + DFYD D+NA  KT
Sbjct: 3740 SYSSDAIAVVGMAGRFPKAKNLAEFWENIANGRNCVSEIASDRWNLADFYDPDRNAANKT 3799

Query: 171  ICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCG 230
             CK MG+LED++ FDPLFF+ISP EAE+MDPQQRLFLQ  W CIEDAGYNP S +GS CG
Sbjct: 3800 YCKSMGALEDVDRFDPLFFHISPREAEFMDPQQRLFLQTSWQCIEDAGYNPKSFAGSKCG 3859

Query: 231  VFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVA 290
            VFVGC   DY K++   ++ NA  L+G S ++LPAR+SYFLNLQGPC+AIDTACS+SLVA
Sbjct: 3860 VFVGCETGDYGKIVQRYEL-NALGLLGSSAALLPARISYFLNLQGPCMAIDTACSASLVA 3918

Query: 291  IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEG 350
            IA+ACDSL+LG+S  ALAGGVY+++ P++HI MSK+G+LSPDG C++FD+RANGFVPGEG
Sbjct: 3919 IANACDSLLLGHSDAALAGGVYVLSGPEMHIMMSKAGILSPDGRCFTFDRRANGFVPGEG 3978

Query: 351  VGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINP 410
            VGV++LK+L DA+KDGDDI  +I+GWGVNQDGKTNGITAPN +SQ RLQ ++Y++F I P
Sbjct: 3979 VGVVLLKRLADAEKDGDDICGVIRGWGVNQDGKTNGITAPNGQSQQRLQKEVYERFQIQP 4038

Query: 411  NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470
             DIQL+EAHGTGT+LGDPIE EALCE+F +F+  + FCA+GS+KSNIGH ATAAGV G+I
Sbjct: 4039 ADIQLVEAHGTGTRLGDPIEVEALCETFREFTNKEKFCAIGSLKSNIGHLATAAGVAGVI 4098

Query: 471  KIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGT 530
            K++L++++K LPPTINY  LNEHI L++SPF+INT+CK W I + + R AAIN FGFSGT
Sbjct: 4099 KVLLAIRNKKLPPTINYESLNEHINLDSSPFYINTECKEW-IVDAEPRRAAINCFGFSGT 4157

Query: 531  NAHIVLMEKIKNNENIDKFINNLPIFMVFP--LSAKNLSQLLIYAKLICNYI 580
            NAH+V+ E + N  +    I ++     +P  LSAKN  +L  YA+ +  ++
Sbjct: 4158 NAHMVIEEYV-NRSDRHPAITDVAPAQPYPILLSAKNEQRLWEYAEQLLKHL 4208

Source: Nostoc sp. 'Peltigera membranacea cyanobiont'

Species: Nostoc sp. 'Peltigera membranacea cyanobiont'

Genus: Nostoc

Family: Nostocaceae

Order: Nostocales

Phylum: Cyanobacteria

Superkingdom: Bacteria

>gi|56553464|gb|AAV97870.1| OnnB [symbiont bacterium of Theonella swinhoei]

 Score =  616 bits (1589), Expect = e-173,   Method: Composition-based stats.
 Identities = 285/479 (59%), Positives = 371/479 (77%), Gaps = 5/479 (1%)

Query: 117  IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
            IAIIGISG+FPKA+ + +FW N+  GRNCVS++P +RW +D+FYD+D    GKT+ K MG
Sbjct: 3599 IAIIGISGKFPKASTLDQFWENIAEGRNCVSEVPESRWSVDEFYDADGKVPGKTMSKWMG 3658

Query: 177  SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
             LE+++ FDPLFF ISP +AE MDPQQRLFLQ CW+CIEDAGYNP +LSGS CGVFVGC 
Sbjct: 3659 ILEEVDQFDPLFFAISPRDAELMDPQQRLFLQACWSCIEDAGYNPKTLSGSSCGVFVGCD 3718

Query: 237  VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
            + DY + +   ++ +A +L+G  VSILPAR+SYFLNLQGPCLA+DTACSSSL AIA+ACD
Sbjct: 3719 MGDYGRSVQYQEL-DAQSLLGGVVSILPARISYFLNLQGPCLAVDTACSSSLTAIANACD 3777

Query: 297  SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356
            SL+LG+S  A+AGGV ++  P+IHI MSK+GMLSP+G C++FDQRANGFVPGEGVG + L
Sbjct: 3778 SLLLGHSDCAVAGGVCVMTGPEIHIMMSKAGMLSPNGTCFTFDQRANGFVPGEGVGAMFL 3837

Query: 357  KKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
            K+ +DA  DGD IY +++GWG+NQDGKTNGITAPN +SQ RL+ ++Y++  I+P DIQL+
Sbjct: 3838 KRYEDAVADGDPIYAVLRGWGINQDGKTNGITAPNARSQTRLEKRVYEQCGIHPEDIQLI 3897

Query: 417  EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
            EAHGTGTKLGDPIE E L ++F  F+  +++CALGSVKSNIGH ATAAGV GMIK++L+L
Sbjct: 3898 EAHGTGTKLGDPIEVEGLRDAFAHFTEKQHYCALGSVKSNIGHLATAAGVSGMIKLVLAL 3957

Query: 477  KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            +H+ LPPT+N+  LNEHI+LE SPF+INT C+ W +   K R AAI+SFGFSGTN H+V+
Sbjct: 3958 QHQKLPPTVNHEKLNEHIRLEGSPFYINTACRDWVVPEGKTRCAAISSFGFSGTNVHMVV 4017

Query: 537  MEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITD 595
             E+ +  EN  +  +  P  +V  LSAK+  QL    + +  +  K  +++     I D
Sbjct: 4018 -EEHQPTEN-RRLTDAAPYLIV--LSAKSDPQLEASLQQLLGFTRKHTEHAETTLHIAD 4072

Source: symbiont bacterium of Theonella swinhoei

Species: symbiont bacterium of Theonella swinhoei

Superkingdom: Bacteria

>gi|310642830|ref|YP_003947588.1| polyketide synthase [Paenibacillus polymyxa SC2] gi|309247780|gb|ADO57347.1| Polyketide synthase pksM [Paenibacillus polymyxa SC2] gi|392303662|emb|CCI70025.1| putative polyketide synthase pksL PKS [Paenibacillus polymyxa M1]

 Score =  602 bits (1553), Expect = e-169,   Method: Composition-based stats.
 Identities = 290/520 (55%), Positives = 378/520 (72%), Gaps = 9/520 (1%)

Query: 64  DKS-INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIAIIGI 122
           DK+ +N  ++ + I+    +  N   S D  K LK  +L  N          D IAIIG+
Sbjct: 304 DKTFVNQQEVKERIQTAYGQQSN---SDDTHKPLKQADLKKNVSRIPHGQEKDSIAIIGM 360

Query: 123 SGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIE 182
           +GQFPK+  + +FW+NL  GR+C+S+IPSTRW IDD+YD+D    GKT  K MG LEDI+
Sbjct: 361 AGQFPKSKTLTEFWDNLAQGRDCISEIPSTRWSIDDYYDTDPKVEGKTYSKWMGVLEDID 420

Query: 183 IFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNK 242
            FDPLFFNISP+EAE MDPQQRLFL++ W CIEDAG NP SLSGS CGVFVGCA SDY +
Sbjct: 421 RFDPLFFNISPAEAEMMDPQQRLFLESSWKCIEDAGLNPASLSGSRCGVFVGCAASDYGR 480

Query: 243 LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGN 302
            ++   + NA  L+G + SIL AR+SY LNL+GP LAIDTACSSSLVAIA AC+SL+L  
Sbjct: 481 SMSGQGL-NAQVLIGGAPSILSARISYLLNLKGPSLAIDTACSSSLVAIAEACNSLVLET 539

Query: 303 SKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDA 362
           S +ALAGGV I+  P +H+  SK+GMLS DG C++FD RANGFVPGEGVGV++LK+L DA
Sbjct: 540 SDLALAGGVMIMAGPGMHVMTSKAGMLSKDGRCFTFDARANGFVPGEGVGVVLLKRLSDA 599

Query: 363 KKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422
            +D D I+ +I+GWG+NQDGKTNGITAP+  SQI L+ ++Y++FNINP  I L+EAHGTG
Sbjct: 600 IRDKDSIHGVIRGWGMNQDGKTNGITAPSVNSQISLEREVYQRFNINPETISLVEAHGTG 659

Query: 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLP 482
           TKLGDPIE E L ESF  ++  K +CALGS+KSN+GH  TAAGV G++K++L++KH+ LP
Sbjct: 660 TKLGDPIEVEGLTESFRSYTSKKGYCALGSLKSNMGHMLTAAGVAGVMKVLLAMKHQQLP 719

Query: 483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME--KI 540
           PTIN+  LNEHI LE SPF+INT  + W+ K    R A++++FGFSGTNAH+V+ E   +
Sbjct: 720 PTINFEALNEHISLEESPFYINTGLQKWESKPGTPRRASVSAFGFSGTNAHMVIEEYVPV 779

Query: 541 KNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYI 580
            +   +D    + P+  +F LSAK+   L  YA  + +++
Sbjct: 780 ASEMKLDPVDQDNPV--LFVLSAKSEQALKAYAADMMDFV 817

Source: Paenibacillus polymyxa SC2

Species: Paenibacillus polymyxa

Genus: Paenibacillus

Family: Paenibacillaceae

Order: Bacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|163756752|ref|ZP_02163862.1| polyketide synthase [Kordia algicida OT-1] gi|161323269|gb|EDP94608.1| polyketide synthase [Kordia algicida OT-1]

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/478 (59%), Positives = 363/478 (75%), Gaps = 10/478 (2%)

Query: 93   SKKLKSKNLSINNDDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPST 152
            ++K  +KN+  NND          IA+IGI+GQFPKA NV +FWNNL  G+NC+S++   
Sbjct: 3089 TQKSATKNIRNNNDH--------RIAVIGIAGQFPKAKNVTEFWNNLATGKNCISEVSKD 3140

Query: 153  RWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWT 212
            RW     + +     GKT  K MG+LE+ + FDPLFFNISP EAE MDPQQRLFLQ+CW 
Sbjct: 3141 RWDNKKHFKAGDPTPGKTNSKWMGALENYDKFDPLFFNISPVEAESMDPQQRLFLQSCWH 3200

Query: 213  CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLN 272
             IEDAGYN  +LSG+ CGVFVGC  SDY++L ++ ++ +A    G S SIL AR+SY LN
Sbjct: 3201 TIEDAGYNTNALSGTKCGVFVGCGASDYHQLSSEHRL-SAQGFTGGSSSILAARISYLLN 3259

Query: 273  LQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD 332
            LQGPCL+IDTACSSSLVA+A ACD+L+ GN  +ALAGGV I+ TP +HI  +++GMLS D
Sbjct: 3260 LQGPCLSIDTACSSSLVALATACDNLVSGNCNVALAGGVGIMATPAMHIMTAQAGMLSQD 3319

Query: 333  GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT 392
            G C++FDQ ANGFVPGE VGV+MLK+L+DA++D D IY +++GWGVNQDGKTNGITAPN 
Sbjct: 3320 GKCHTFDQNANGFVPGEAVGVVMLKRLEDAERDNDRIYGVVQGWGVNQDGKTNGITAPNA 3379

Query: 393  KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGS 452
             SQ  L+ ++Y+KFNI+P  IQL+EAHGTGTKLGDPIE +AL +SF K++ ++ FCALGS
Sbjct: 3380 VSQASLEAEVYEKFNIDPAQIQLIEAHGTGTKLGDPIEVDALKQSFKKYTENETFCALGS 3439

Query: 453  VKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDI 512
            VKSNIGH+  AAG+ G +K+IL+L+H+ LPPTINY+ LNEHI L+NSPF++N K + W I
Sbjct: 3440 VKSNIGHTMWAAGISGFLKVILALQHQQLPPTINYSKLNEHINLKNSPFYVNNKLQDWKI 3499

Query: 513  KNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLL 570
             +++KR AAI+SFGFSGTNAHIVL E +  N +       L  F + PL+AKN +QLL
Sbjct: 3500 NSEEKRQAAISSFGFSGTNAHIVLSEYVPKNTHQHTVDYTLDGFAI-PLAAKNKAQLL 3556

Source: Kordia algicida OT-1

Species: Kordia algicida

Genus: Kordia

Family: Flavobacteriaceae

Order: Flavobacteriales

Class: Flavobacteriia

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|163756753|ref|ZP_02163863.1| polyketide synthase of type I [Kordia algicida OT-1] gi|161323270|gb|EDP94609.1| polyketide synthase of type I [Kordia algicida OT-1]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 272/478 (56%), Positives = 360/478 (75%), Gaps = 6/478 (1%)

Query: 117  IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
            IA++G++GQFPKA NV++FW N+  G NC++++P  RW I+++Y       GKT  K +G
Sbjct: 2564 IAVVGMAGQFPKAENVQQFWQNIAQGENCITEVPKERWDINEYYSEGTPTPGKTNSKWLG 2623

Query: 177  SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            SL   + FDPLFF ISP EAE MDPQQRLFLQ+CW  IEDAGYNP +LSG+ CGVFVGCA
Sbjct: 2624 SLAGYDQFDPLFFTISPIEAESMDPQQRLFLQSCWHSIEDAGYNPQALSGTKCGVFVGCA 2683

Query: 237  VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
              DY +L +  +  +A    G + SIL AR+SYFLNLQGPC+A+DTACSSSLVAIA+ACD
Sbjct: 2684 TGDY-QLPSREQQLSAQGFTGGTSSILAARISYFLNLQGPCIALDTACSSSLVAIANACD 2742

Query: 297  SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356
            SL  G S  ALAGGVY++  P++H+K ++SGMLS DG C++FDQ ANGFVPGE VGV+ML
Sbjct: 2743 SLASGASDSALAGGVYVMTGPEMHVKTAQSGMLSKDGKCHTFDQEANGFVPGEAVGVVML 2802

Query: 357  KKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
            K+L+DA++D D+IY +IKGWG+NQDG+TNGITAPN++SQ  L+ ++Y +++INP +IQL+
Sbjct: 2803 KRLEDAERDNDNIYGVIKGWGLNQDGRTNGITAPNSQSQTNLEQEVYDRYDINPEEIQLI 2862

Query: 417  EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
            EAHGTGTKLGDPIE  AL  SF K++  + +CALGSVKSNIGH  TAAGV G IK++ ++
Sbjct: 2863 EAHGTGTKLGDPIEVAALKNSFKKYTEKEQYCALGSVKSNIGHCLTAAGVAGFIKVMKAM 2922

Query: 477  KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            +HK LPPTI+YN LNEHI LE SPF++N + + W++   + R AAI++FGFSGTNAH+V+
Sbjct: 2923 EHKKLPPTIHYNQLNEHISLEKSPFYVNDRLQDWEVGQAEIRHAAISAFGFSGTNAHLVM 2982

Query: 537  MEKIKNNENIDKFINNLPIF---MVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVK 591
             E I   E +DK   N+       + P+SA+N  QL I A+ +  Y  ++L    +V+
Sbjct: 2983 SEYIP--ETVDKSQINVITQNKKYLIPISARNEEQLEIQAENLLAYAKQNLTTIDLVE 3038

Source: Kordia algicida OT-1

Species: Kordia algicida

Genus: Kordia

Family: Flavobacteriaceae

Order: Flavobacteriales

Class: Flavobacteriia

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|308069766|ref|YP_003871371.1| polyketide synthase module containing protein [Paenibacillus polymyxa E681] gi|305859045|gb|ADM70833.1| Polyketide synthase module containing protein [Paenibacillus polymyxa E681]

 Score =  588 bits (1517), Expect = e-165,   Method: Composition-based stats.
 Identities = 286/522 (54%), Positives = 376/522 (72%), Gaps = 12/522 (2%)

Query: 64  DKS-INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIAIIGI 122
           DK+ +N  ++ + I+    ++ N   S+   K + SK      D      + + IAIIG+
Sbjct: 302 DKTFVNQQEVKERIQFAYGQLPNSNDSHKTVKHIDSKKAM--PDMPRGQEHKESIAIIGM 359

Query: 123 SGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIE 182
           +GQFP++ N+ +FW+NL  GR+C+S+IPSTRW ID++YD+D  A GKT  K MG LED++
Sbjct: 360 AGQFPESRNLAEFWDNLAQGRDCISEIPSTRWSIDEYYDTDPKAQGKTYSKWMGVLEDVD 419

Query: 183 IFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNK 242
            FDPLFFNISP+EAE MDPQQRLFL++ W CIEDAG NP SLS S CGVFVGCA SDY +
Sbjct: 420 KFDPLFFNISPAEAEMMDPQQRLFLESSWKCIEDAGLNPASLSESRCGVFVGCAASDYGR 479

Query: 243 LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGN 302
            ++   + NA  LMG S SIL AR+SY LNL+GP LAIDTACSSSLVAIA AC+SL L  
Sbjct: 480 SMSGQGL-NAQVLMGGSPSILSARISYLLNLKGPSLAIDTACSSSLVAIAEACNSLFLET 538

Query: 303 SKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDA 362
           S +ALAGGV I+  P +H+  SK+GMLS DG C++FD RANGFVPGEGVGV++LK+L DA
Sbjct: 539 SDLALAGGVMIMAGPGMHVMTSKAGMLSKDGRCFTFDARANGFVPGEGVGVILLKRLSDA 598

Query: 363 KKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422
            +D D IY +I+GWG+NQDGKTNGITAP+  SQI L+  +Y++FNI+P  I ++EAHGTG
Sbjct: 599 VRDKDSIYGVIRGWGMNQDGKTNGITAPSVNSQISLEKDVYRRFNIHPETISMIEAHGTG 658

Query: 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLP 482
           TKLGDPIE E L ESF  ++  K +CALGS+KSN+GH  TAAGV  ++K++L++KH  LP
Sbjct: 659 TKLGDPIEVEGLTESFRSYTSKKGYCALGSLKSNMGHMMTAAGVASVMKVLLAMKHHQLP 718

Query: 483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKN 542
           PTI++  LNEHI LE+SPF+INT  +SW+ +    R A ++SFGFSGTNAH+V+ E +  
Sbjct: 719 PTIHFESLNEHISLEDSPFYINTSLQSWEPEPGVPRRAGVSSFGFSGTNAHMVIEEYVP- 777

Query: 543 NENIDKFINNLPIFM----VFPLSAKNLSQLLIYAKLICNYI 580
              +   +N  P+      +F LSAK+   L  YA  + N++
Sbjct: 778 ---VVSAVNLPPVGKDNPGLFVLSAKSEQSLKTYAVDMMNFV 816

Source: Paenibacillus polymyxa E681

Species: Paenibacillus polymyxa

Genus: Paenibacillus

Family: Paenibacillaceae

Order: Bacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|427414901|ref|ZP_18905088.1| PfaD family protein [Leptolyngbya sp. PCC 7375] gi|425755554|gb|EKU96419.1| PfaD family protein [Leptolyngbya sp. PCC 7375]

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 265/427 (62%), Positives = 333/427 (77%), Gaps = 1/427 (0%)

Query: 112  INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
            +   DIA+IG++GQFP A+++  FW NL  GR+C+S++ S RW +  +YD    A GKT 
Sbjct: 702  LKRQDIAVIGMAGQFPMAHDITAFWENLRTGRDCISEVSSDRWPLAAYYDPRPEAPGKTY 761

Query: 172  CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGV 231
             K MG LED++ FDPLFFNISP EAE MDPQQRLFLQ+CW+CIEDAGYNP +L+GS CGV
Sbjct: 762  SKWMGVLEDVDKFDPLFFNISPLEAEAMDPQQRLFLQSCWSCIEDAGYNPLTLAGSNCGV 821

Query: 232  FVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
            F GC   DY  L       +A  LMG S+SIL AR+SY LNLQGPC+A+DTACSSSLVAI
Sbjct: 822  FAGCGTGDYG-LSFGRVEQDASTLMGSSLSILAARISYVLNLQGPCIAMDTACSSSLVAI 880

Query: 292  AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
            A ACDSL LG+S +ALAGGV ++  P +HI  SK+GMLSPDG C++FDQRANGFVPGEGV
Sbjct: 881  ASACDSLTLGSSDLALAGGVCVMAGPTMHITTSKAGMLSPDGRCFTFDQRANGFVPGEGV 940

Query: 352  GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
            GV++LK+L DA++DGD I  +I+GWGVNQDGKTNGITAPN  SQ RL+  +Y +F +NP 
Sbjct: 941  GVVLLKRLADAERDGDRIDGVIRGWGVNQDGKTNGITAPNGDSQTRLEKYVYDRFGLNPE 1000

Query: 412  DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
            +IQL+EAHGTGTKLGDPIE   L  SF +++  +++CALGSVKSN+GH   AAGV G+IK
Sbjct: 1001 NIQLVEAHGTGTKLGDPIEVAGLQASFQEYTSRQHYCALGSVKSNVGHLLAAAGVAGVIK 1060

Query: 472  IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
              L+LKH+ LPPTI++  LNEHI+LENSPF++NT C+ W ++  + R AA++ FGFSGTN
Sbjct: 1061 STLALKHRKLPPTIHFETLNEHIELENSPFYVNTTCRDWQVEANQVRCAAVSGFGFSGTN 1120

Query: 532  AHIVLME 538
            AH+V+ E
Sbjct: 1121 AHLVIEE 1127

Source: Leptolyngbya sp. PCC 7375

Species: Leptolyngbya sp. PCC 7375

Genus: Leptolyngbya

Order: Oscillatoriales

Phylum: Cyanobacteria

Superkingdom: Bacteria

>gi|441497519|ref|ZP_20979732.1| Long-chain-fatty-acid--CoA ligase [Fulvivirga imtechensis AK7] gi|441438729|gb|ELR72060.1| Long-chain-fatty-acid--CoA ligase [Fulvivirga imtechensis AK7]

 Score =  570 bits (1470), Expect = e-159,   Method: Composition-based stats.
 Identities = 278/468 (59%), Positives = 355/468 (75%), Gaps = 11/468 (2%)

Query: 117  IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
            IAIIG++GQFP+A NV++FW+N++ GRNC+SK+   RW +   Y   +   GKT C+ MG
Sbjct: 4666 IAIIGMAGQFPQAKNVEEFWDNIVQGRNCISKV--QRWDLATHYREGEPVPGKTNCEWMG 4723

Query: 177  SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            SLED ++FDPLFFNI+P+EAE MDPQQRLFLQ+CW  IE+AGY+  +LSGS CGVFVG  
Sbjct: 4724 SLEDHDLFDPLFFNIAPTEAETMDPQQRLFLQSCWHSIENAGYDARTLSGSKCGVFVGAG 4783

Query: 237  VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
              DY  L  + ++ +A    G + SIL AR+SYFLNLQGPCL IDTACSSSLVAIA ACD
Sbjct: 4784 AGDYQFLSRELQV-SAKGFTGTANSILAARISYFLNLQGPCLTIDTACSSSLVAIATACD 4842

Query: 297  SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356
            SLI GNS +ALAGGV ++ TPD+HIK S+SGMLS DG CY+FD RANGFVPGEGVGV+ML
Sbjct: 4843 SLISGNSDLALAGGVCVMATPDLHIKSSQSGMLSKDGRCYTFDDRANGFVPGEGVGVVML 4902

Query: 357  KKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
            K+L DA++D D I  +++GWGVNQDGKTNGITAP+ +SQ RL   +Y KFNI+P  IQL+
Sbjct: 4903 KRLSDAERDQDRIIGVLEGWGVNQDGKTNGITAPSPESQKRLMQDVYDKFNIDPASIQLI 4962

Query: 417  EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
            EAHGTGTKLGDPIE  AL ESF+K++  K +CA+GSVKSNIGH   AAGV G+IK  L+L
Sbjct: 4963 EAHGTGTKLGDPIEVAALVESFSKYTREKEYCAIGSVKSNIGHCMAAAGVAGVIKASLAL 5022

Query: 477  KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            K+K LPPTIN+  LNEHI L+++PF++N + ++W+     K  AA++SFGFSGTNAH+V+
Sbjct: 5023 KNKQLPPTINFTRLNEHINLKDTPFYVNDRLQTWN--GSAKHHAAVSSFGFSGTNAHLVI 5080

Query: 537  --MEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISK 582
               E  K  + +D  I N  +  + PLSA+N  +L+  A  + ++I K
Sbjct: 5081 SGYEPRKEPKPVD--IKNPEV--IIPLSARNTERLMHKAGDLLDHIRK 5124

Source: Fulvivirga imtechensis AK7

Species: Fulvivirga imtechensis

Genus: Fulvivirga

Family: Flammeovirgaceae

Order: Cytophagales

Class: Cytophagia

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|441497520|ref|ZP_20979733.1| Malonyl CoA-acyl carrier protein transacylase [Fulvivirga imtechensis AK7] gi|441438730|gb|ELR72061.1| Malonyl CoA-acyl carrier protein transacylase [Fulvivirga imtechensis AK7]

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 264/456 (57%), Positives = 343/456 (75%), Gaps = 6/456 (1%)

Query: 117  IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
            IA++G++GQFP + N+  FW N+  G+NC+S++P  RW I+ FY   +   GKT  K  G
Sbjct: 2630 IAVVGMAGQFPMSGNLDDFWKNIAAGKNCISEVPQKRWDINTFYHEGEPVPGKTNSKWAG 2689

Query: 177  SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
             +E  ++FDPLFFNISP++AE MDPQQR+ LQ CW  IE+AGY+P SLSGS CGV++GCA
Sbjct: 2690 LMEGYDLFDPLFFNISPTDAESMDPQQRVLLQACWESIENAGYSPKSLSGSRCGVYMGCA 2749

Query: 237  VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
              DY+ L++     +A    G + SIL AR+ Y LNLQGPC++IDTACSSSLVAIA ACD
Sbjct: 2750 SGDYH-LLSRELQISAQGFTGGATSILAARICYLLNLQGPCVSIDTACSSSLVAIASACD 2808

Query: 297  SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356
            SL+ G+  +A+AGGVY++  PD+HIK S++GMLS DG C++FDQ+ANGFVPGEGVGV++L
Sbjct: 2809 SLVSGSCDMAMAGGVYVMVGPDMHIKSSQAGMLSRDGKCHTFDQKANGFVPGEGVGVVIL 2868

Query: 357  KKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
            K+L DA+KD D I+ +I+GWGVNQDGKTNGITAPN +SQIRL+ ++Y +F I+P+ IQL+
Sbjct: 2869 KRLADAQKDNDIIHGVIEGWGVNQDGKTNGITAPNEESQIRLEREVYDRFKIDPDSIQLV 2928

Query: 417  EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
            EAHGTGTKLGDPIE  AL +SF  ++  K +CALGSVKSNIGH  TAAGV   IK +L+L
Sbjct: 2929 EAHGTGTKLGDPIEVNALKQSFKNYTKKKEYCALGSVKSNIGHCLTAAGVASFIKTLLAL 2988

Query: 477  KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            KH+ LPPTINY+ LNEHI L++SPF++N + K W      KR AAI++FGFSGTNAHIVL
Sbjct: 2989 KHQQLPPTINYDSLNEHIALKDSPFYVNNELKEWKAGEAGKRQAAISAFGFSGTNAHIVL 3048

Query: 537  ME---KIKNNENIDKFINNLPIFMVFPLSAKNLSQL 569
             E    ++N  ++     +  I  + PLSAK   QL
Sbjct: 3049 SEYVAPVENKRSVSVITQDSKI--IVPLSAKTADQL 3082

Source: Fulvivirga imtechensis AK7

Species: Fulvivirga imtechensis

Genus: Fulvivirga

Family: Flammeovirgaceae

Order: Cytophagales

Class: Cytophagia

Phylum: Bacteroidetes

Superkingdom: Bacteria

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	829
UNIPROTKB|Q4KCD7	4937	rzxC "Polyketide synthase RzxC	0.494	0.083	0.443	6.5e-94
UNIPROTKB|Q4KCD6	4039	rzxD "Polyketide synthase RzxD	0.537	0.110	0.428	4e-92
UNIPROTKB|Q4KCD4	4163	rzxE "Polyketide synthase RzxE	0.531	0.105	0.403	8.1e-86
UNIPROTKB|Q10978	1538	ppsB "Phthiocerol synthesis po	0.515	0.277	0.401	6.1e-85
UNIPROTKB|Q7TXL9	1538	ppsB "Phthiocerol/phenolphthio	0.515	0.277	0.401	6.1e-85
UNIPROTKB|Q4KCD8	6675	rzxB "Polyketide synthase/nonr	0.540	0.067	0.386	8.7e-79
UNIPROTKB|P96203	1827	ppsD "Phthiocerol synthesis po	0.558	0.253	0.372	1e-78
UNIPROTKB|Q7TXL7	1827	ppsD "Phthiocerol/phenolphthio	0.558	0.253	0.372	1e-78
UNIPROTKB|P94996	2126	pks7 "Probable polyketide synt	0.591	0.230	0.349	3.9e-78
UNIPROTKB|P96284	496	pks15 "Putative inactive pheno	0.507	0.848	0.387	6.2e-78

UNIPROTKB|Q4KCD7 rzxC "Polyketide synthase RzxC" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 954 (340.9 bits), Expect = 6.5e-94, P = 6.5e-94
 Identities = 187/422 (44%), Positives = 272/422 (64%)

Query:   117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
             IA+IG++GQFP A++V   W+NLL G + V  +    ++  + Y +D+   GK+ C + G
Sbjct:  2094 IAVIGMAGQFPGADDVDALWDNLLAGHHSVQAL-GPDYLQPEAYSADRQP-GKSYCNRAG 2151

Query:   177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
              L+D + FDPLFFN++P EAE M P QRL LQ  W  +EDAGYNP +L+G    ++VG  
Sbjct:  2152 ILKDRDCFDPLFFNLTPHEAESMTPHQRLVLQESWKALEDAGYNPMTLAGQAVSLYVGA- 2210

Query:   237 VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
                      +P  Y+  +  G S +I+ +R+SYFL+L+GP + ++T CSSS VAI  AC+
Sbjct:  2211 ---------EPGGYHHDSFTGSSEAIIASRLSYFLDLKGPAMVVNTGCSSSAVAIHQACE 2261

Query:   297 SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVXXX 356
             SL  G S++ALAGGVY +      I +S   MLSP G C++FD  A+G V  EGV +   
Sbjct:  2262 SLRHGESRMALAGGVYALLDQRGLISLSAIDMLSPSGQCHAFDAAADGTVISEGVAMVVL 2321

Query:   357 XXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
                         IY +I+  GVNQDG +NGITAPN  +Q +L    +++F ++P  I  +
Sbjct:  2322 KRLEDAEAEGDPIYAVIEASGVNQDGVSNGITAPNGDAQEQLLRDTWRRFGVDPGHISYV 2381

Query:   417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
             EAHGTGT+LGDP+E  AL  +   F+  + +C LGS K+N+GH+A AAGVIG+IK++LS+
Sbjct:  2382 EAHGTGTRLGDPVEANALIRALRGFTDAQGYCVLGSAKANLGHAAAAAGVIGLIKVLLSI 2441

Query:   477 KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
             +H+ LP    +  +N  I+LE+SPF+IN + ++W     ++R+AA+NSFG SGTNAH+V+
Sbjct:  2442 RHRTLPAMPGFERINPLIELEHSPFYINRQAQAWQASGGQRRVAALNSFGHSGTNAHLVI 2501

Query:   537 ME 538
              E
Sbjct:  2502 AE 2503

GO:0030639 "polyketide biosynthetic process" evidence=IDA

UNIPROTKB|Q4KCD6 rzxD "Polyketide synthase RzxD" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 936 (334.5 bits), Expect = 4.0e-92, P = 4.0e-92
 Identities = 199/464 (42%), Positives = 286/464 (61%)

Query:   114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
             +DDIA+IG+SGQFP A NV++FW+NL  G + V ++      +   Y +++   GKT CK
Sbjct:    53 HDDIAVIGMSGQFPGAENVERFWHNLSTGADGVVELGERYLDLQRSYSAERQP-GKTYCK 111

Query:   174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFV 233
               G L + + FDPLFFNISP +AE M+P QRL LQ  W  +EDAGYNP S      G+FV
Sbjct:   112 WGGVLAERDDFDPLFFNISPRDAESMNPHQRLILQESWKALEDAGYNPKSFRDQAVGIFV 171

Query:   234 GCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
             G           +P  Y     +G S +I+ +R+SYFL+ +GP L ++T CSSS  AI  
Sbjct:   172 GA----------EPTGYFHETFIGASDAIIASRLSYFLDFKGPALVVNTGCSSSATAIHL 221

Query:   294 ACDSLILGNSKIALAGGVYI-INTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
             AC+SL    + +ALAGGV+  +  P + I +++  MLSP G C++FDQR++G V  E VG
Sbjct:   222 ACESLRNQQADLALAGGVFATLGEPGL-ISLAQMDMLSPTGRCHTFDQRSDGIVLSEAVG 280

Query:   353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
             +               IY +I   G+NQDG +NGITAP+ ++Q RL +++Y++F I+P  
Sbjct:   281 MVTLKRLSQALADGDPIYGVICASGMNQDGASNGITAPSGQAQERLISELYRRFAIDPRQ 340

Query:   413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472
             I  +EAHGTGT LGDP+E  AL  +F +F+    +CALGS K++IGH++ AAGV+ +IKI
Sbjct:   341 ISYVEAHGTGTPLGDPVEVNALVRAFRQFTTDTGYCALGSAKAHIGHASAAAGVVSLIKI 400

Query:   473 ILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNA 532
             +LS+KH  LP  +N+  LN  I+L  S F I+ + + W  +  K  MAA+NSFG SGTN 
Sbjct:   401 LLSMKHGQLPGLLNFQQLNPRIELAGSAFHIHPEPREWLAEAPK--MAALNSFGHSGTNV 458

Query:   533 HIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLI 576
             H+V+ +  K        +++ P   + PLSA+    L  YA+ +
Sbjct:   459 HMVIRQAPKPAAAP---LSHEPRLCLLPLSARTADSLKRYARRV 499

GO:0030639 "polyketide biosynthetic process" evidence=IDA;TAS

UNIPROTKB|Q4KCD4 rzxE "Polyketide synthase RzxE" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 863 (308.9 bits), Expect = 8.1e-86, Sum P(3) = 8.1e-86
 Identities = 183/454 (40%), Positives = 271/454 (59%)

Query:   117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
             +AIIGISG+FP A    + W  L  GR+ VS+IP  R+   + Y   +    KT C  MG
Sbjct:  1664 MAIIGISGRFPGARTTDELWQVLAEGRDMVSEIPPERYDWREHYGDPRENPTKTRCIWMG 1723

Query:   177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
             S+  I+ FDPLFF ISP EA ++DP+QRL LQ  W  +EDAG  P  L+    G+FVG  
Sbjct:  1724 SVPGIDEFDPLFFEISPREATHLDPRQRLLLQESWNVLEDAGIGPRQLATQRVGMFVGVE 1783

Query:   237 VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
               D+ +L  +  + +++        IL +R++YFLNL GP +AI+TACSS+LVA+  A  
Sbjct:  1784 EGDFQRLAGEESLTSSHN------GILASRLAYFLNLTGPTMAINTACSSALVALHQAAS 1837

Query:   297 SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVXXX 356
             SL     ++A+A GV +I + D  I M+++GMLSPDG C++FD RANG VPGE V     
Sbjct:  1838 SLRNQECEMAIAAGVNLIFSADAFIGMTQAGMLSPDGKCFAFDHRANGMVPGEAVCCVLL 1897

Query:   357 XXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
                         IY  ++  G+N DGKTNGITAP+  SQ RL  ++Y++  I+   +  +
Sbjct:  1898 KPLARAEADGDRIYGTLRASGLNYDGKTNGITAPSGVSQQRLLEEVYRRAGIDTQAVDYI 1957

Query:   417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
               HGTGT+LGDP+E  AL ++F   S     CAL S K+N+GH+  A+G++ +I ++ +L
Sbjct:  1958 VTHGTGTQLGDPVEINALNDAFGGNS--PGHCALTSTKTNLGHTFAASGLVSVISLLQAL 2015

Query:   477 KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNK-KKRMAAINSFGFSGTNAHIV 535
             +H+ +P +++    N +I+ + SPF++N   K W    + ++R+ A+++FG SGTNAH+V
Sbjct:  2016 RHETIPASLHCEQENHYIQWQQSPFYVNKANKPWPQAGRDRERLGAVSAFGMSGTNAHVV 2075

Query:   536 LMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQL 569
             +      ++  D      P + V  LSAK    L
Sbjct:  2076 VQSY---SQRADDAALRRPCY-VLVLSAKTAEAL 2105

GO:0030639 "polyketide biosynthetic process" evidence=IDA;TAS

UNIPROTKB|Q10978 ppsB "Phthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 860 (307.8 bits), Expect = 6.1e-85, P = 6.1e-85
 Identities = 175/436 (40%), Positives = 259/436 (59%)

Query:   106 DDFDKSIN---NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYD 161
             D+FD+       + +A++GI  +FP   +  + FW+ L+ GRN +S +P+ RW  + FY 
Sbjct:    22 DEFDRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYH 81

Query:   162 SDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP 221
              D    G+   K  G + D+  FD  FF I+P EA  MDPQQR+ L+  W  +E AG  P
Sbjct:    82 PDPLTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPP 141

Query:   222 FSLSGSLCGVFVGCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAI 280
              SL G+   V +G   ++Y  ++   P+  +AY+  G + SI   R+SY L L+GP +A+
Sbjct:   142 DSLGGTRTAVMMGVYFNEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAV 201

Query:   281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQ 340
             DTACSSSLVA+  AC SL L  + +ALAGGV I   P+  I +S  G+LSP G C +FD 
Sbjct:   202 DTACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDA 261

Query:   341 RANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQT 400
              A+GFV GEG GV               +  +++G  VNQDG++NG+TAPNT +Q  +  
Sbjct:   262 AADGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIA 321

Query:   401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS 460
                +  ++ P+ +  +EAHGTGT LGDPIEFEAL  ++    +  + CALG+VK+NIGH 
Sbjct:   322 DALRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHL 378

Query:   461 ATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520
               AAG+ G IK  L+++   +PP ++++  N  I   ++ FF+ T+   W      +R A
Sbjct:   379 EAAAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTAEGPRR-A 437

Query:   521 AINSFGFSGTNAHIVL 536
             A++SFG  GTNAH+++
Sbjct:   438 AVSSFGLGGTNAHVII 453

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=IDA

GO:0034081 "polyketide synthase complex" evidence=ISS

GO:0071766 "Actinobacterium-type cell wall biogenesis" evidence=ISS

GO:0071770 "DIM/DIP cell wall layer assembly" evidence=IDA

GO:0097040 "phthiocerol biosynthetic process" evidence=ISS

GO:0097041 "phenolic phthiocerol biosynthetic process" evidence=ISS

UNIPROTKB|Q7TXL9 ppsB "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium bovis AF2122/97 (taxid:233413)]

 Score = 860 (307.8 bits), Expect = 6.1e-85, P = 6.1e-85
 Identities = 175/436 (40%), Positives = 259/436 (59%)

Query:   106 DDFDKSIN---NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYD 161
             D+FD+       + +A++GI  +FP   +  + FW+ L+ GRN +S +P+ RW  + FY 
Sbjct:    22 DEFDRVSRIAVAEPVAVVGIGCRFPGDVDGPESFWDFLVAGRNAISTVPADRWDAEAFYH 81

Query:   162 SDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP 221
              D    G+   K  G + D+  FD  FF I+P EA  MDPQQR+ L+  W  +E AG  P
Sbjct:    82 PDPLTPGRMTTKWGGFVPDVAGFDAEFFGITPREAAAMDPQQRMLLEVAWEALEHAGIPP 141

Query:   222 FSLSGSLCGVFVGCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAI 280
              SL G+   V +G   ++Y  ++   P+  +AY+  G + SI   R+SY L L+GP +A+
Sbjct:   142 DSLGGTRTAVMMGVYFNEYQSMLAASPQNVDAYSGTGNAHSITVGRISYLLGLRGPAVAV 201

Query:   281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQ 340
             DTACSSSLVA+  AC SL L  + +ALAGGV I   P+  I +S  G+LSP G C +FD 
Sbjct:   202 DTACSSSLVAVHLACQSLRLRETDLALAGGVSITLRPETQIAISAWGLLSPQGRCAAFDA 261

Query:   341 RANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQT 400
              A+GFV GEG GV               +  +++G  VNQDG++NG+TAPNT +Q  +  
Sbjct:   262 AADGFVRGEGAGVVVLKRLTDAVRDGDQVLAVVRGSAVNQDGRSNGVTAPNTAAQCDVIA 321

Query:   401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS 460
                +  ++ P+ +  +EAHGTGT LGDPIEFEAL  ++    +  + CALG+VK+NIGH 
Sbjct:   322 DALRSGDVAPDSVNYVEAHGTGTVLGDPIEFEALAATYG---HGGDACALGAVKTNIGHL 378

Query:   461 ATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520
               AAG+ G IK  L+++   +PP ++++  N  I   ++ FF+ T+   W      +R A
Sbjct:   379 EAAAGIAGFIKATLAVQRATIPPNLHFSQWNPAIDAASTRFFVPTQNSPWPTAEGPRR-A 437

Query:   521 AINSFGFSGTNAHIVL 536
             A++SFG  GTNAH+++
Sbjct:   438 AVSSFGLGGTNAHVII 453

GO:0034081 "polyketide synthase complex" evidence=IMP

GO:0071766 "Actinobacterium-type cell wall biogenesis" evidence=IMP

GO:0097040 "phthiocerol biosynthetic process" evidence=IMP

GO:0097041 "phenolic phthiocerol biosynthetic process" evidence=IMP

UNIPROTKB|Q4KCD8 rzxB "Polyketide synthase/nonribosomal peptide synthetase hybrid RzxB" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 813 (291.2 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 183/474 (38%), Positives = 265/474 (55%)

Query:   114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
             + D+AI+G++G++ +++NV++ W +L    +C++++P+ RW    ++D      G+    
Sbjct:  3776 DSDVAIVGLAGRYAQSDNVRELWQHLKAAESCIAQVPADRWDWRQYFDRTPGTEGRVYSP 3835

Query:   174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSG-SLCGVF 232
               G +  I+ FDPLFF++SP EA  MDPQ+RLFL+  + CI DAGY P  L+     GVF
Sbjct:  3836 WGGFIGQIDQFDPLFFHLSPREALKMDPQERLFLEEAYHCISDAGYTPARLAERQRVGVF 3895

Query:   233 VGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
             VG     Y++        ++Y     SV+    RVSY  N QGP LA+DTACSSSL A+ 
Sbjct:  3896 VGVMNGTYSR-------QSSYW----SVA---NRVSYQFNFQGPSLAVDTACSSSLTALH 3941

Query:   293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
              A +SL  G S   L GGV ++  P  +I +S+  MLS   HC +F   A+GFV GEGVG
Sbjct:  3942 LAVESLHSGVSDCVLVGGVSLLVDPVHYIGLSEMKMLSAGQHCKAFGADADGFVAGEGVG 4001

Query:   353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
                             IY +IKG  +N  GKTNG T PN  +Q RL      +  ++P  
Sbjct:  4002 AMLLKPLAQAEADGDRIYGVIKGSMINAGGKTNGYTVPNPLAQSRLVVDSLARAGVDPRA 4061

Query:   413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYH--KNFCALGSVKSNIGHSATAAGVIGMI 470
             +  +EAHGTGT LGDPIE   L  +FN  +    K +CA+GS+KSNIGH  +AAG+ G+ 
Sbjct:  4062 VSYVEAHGTGTALGDPIEIAGLARAFNADAATPLKQYCAIGSIKSNIGHCESAAGIAGIT 4121

Query:   471 KIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD--------IKNKKKRMAAI 522
             K++L L+H+ L P+++    N HI   NSPF +      W         ++   KR+A +
Sbjct:  4122 KVLLQLQHRQLVPSLHAATANPHIDFANSPFVVQQSLAQWSRPQVLIDGVQQTFKRIATV 4181

Query:   523 NSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLI 576
             +SFG  G NAH+V+ E           +N+    ++  LSAK   QLL  A+L+
Sbjct:  4182 SSFGAGGANAHVVIEEYEDLRVRPQITVNHEQPALIL-LSAKTGEQLLQQARLL 4234

GO:0019184 "nonribosomal peptide biosynthetic process" evidence=IMP;IDA

GO:0030639 "polyketide biosynthetic process" evidence=IDA

UNIPROTKB|P96203 ppsD "Phthiocerol synthesis polyketide synthase type I PpsD" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 804 (288.1 bits), Expect = 1.0e-78, P = 1.0e-78
 Identities = 175/470 (37%), Positives = 260/470 (55%)

Query:   115 DDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
             + +A++GI  +FP      + FW  L  G + + ++P  RW  D FYD D +A G+   K
Sbjct:    36 EPVAVVGIGCRFPGNVTGPESFWQLLADGVDTIEQVPPDRWDADAFYDPDPSASGRMTTK 95

Query:   174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFV 233
               G + D++ FD  FF I+P EA  MDPQ R+ L+  W  +E AG  P SLSG+  GV +
Sbjct:    96 WGGFVSDVDAFDADFFGITPREAVAMDPQHRMLLEVAWEALEHAGIPPDSLSGTRTGVMM 155

Query:   234 GCAVSDYNKLITDPKM-YNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
             G +  DY  +  + +   +AY   G        R++Y L L+GP +A+DTACSSSLVAI 
Sbjct:   156 GLSSWDYTIVNIERRADIDAYLSTGTPHCAAVGRIAYLLGLRGPAVAVDTACSSSLVAIH 215

Query:   293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
              AC SL L  + +ALAGGV +  +P   I +SK   LSP G C SFD  A+GFV GEG G
Sbjct:   216 LACQSLRLRETDVALAGGVQLTLSPFTAIALSKWSALSPTGRCNSFDANADGFVRGEGCG 275

Query:   353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
             V               +  +++G   N DG++NG+TAPN  +Q  + T   K  ++ P+ 
Sbjct:   276 VVVLKRLADAVRDQDRVLAVVRGSATNSDGRSNGMTAPNALAQRDVITSALKLADVTPDS 335

Query:   413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYH-KNFCALGSVKSNIGHSATAAGVIGMIK 471
             +  +E HGTGT LGDPIEFE+L  ++       ++ CALGSVK+NIGH   AAGV G IK
Sbjct:   336 VNYVETHGTGTVLGDPIEFESLAATYGLGKGQGESPCALGSVKTNIGHLEAAAGVAGFIK 395

Query:   472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
              +L+++   +P  +++   N  I    +  F+ T+   W      +R AA++SFG SGTN
Sbjct:   396 AVLAVQRGHIPRNLHFTRWNPAIDASATRLFVPTESAPWPAAAGPRR-AAVSSFGLSGTN 454

Query:   532 AHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYIS 581
             AH+V+ +     +        +P      +S K  +++   A ++ +++S
Sbjct:   455 AHVVVEQA---PDTAVAAAGGMPYVSALNVSGKTAARVASAAAVLADWMS 501

GO:0005886 "plasma membrane" evidence=IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IDA

GO:0034081 "polyketide synthase complex" evidence=ISS

GO:0071766 "Actinobacterium-type cell wall biogenesis" evidence=ISS

GO:0071770 "DIM/DIP cell wall layer assembly" evidence=IDA

GO:0097040 "phthiocerol biosynthetic process" evidence=ISS

GO:0097041 "phenolic phthiocerol biosynthetic process" evidence=ISS

UNIPROTKB|Q7TXL7 ppsD "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD" [Mycobacterium bovis AF2122/97 (taxid:233413)]

 Score = 804 (288.1 bits), Expect = 1.0e-78, P = 1.0e-78
 Identities = 175/470 (37%), Positives = 260/470 (55%)

Query:   115 DDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
             + +A++GI  +FP      + FW  L  G + + ++P  RW  D FYD D +A G+   K
Sbjct:    36 EPVAVVGIGCRFPGNVTGPESFWQLLADGVDTIEQVPPDRWDADAFYDPDPSASGRMTTK 95

Query:   174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFV 233
               G + D++ FD  FF I+P EA  MDPQ R+ L+  W  +E AG  P SLSG+  GV +
Sbjct:    96 WGGFVSDVDAFDADFFGITPREAVAMDPQHRILLEVAWEALEHAGIPPDSLSGTRTGVMM 155

Query:   234 GCAVSDYNKLITDPKM-YNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
             G +  DY  +  + +   +AY   G        R++Y L L+GP +A+DTACSSSLVAI 
Sbjct:   156 GLSSWDYTIVNIERRADIDAYLSTGTPHCAAVGRIAYLLGLRGPAVAVDTACSSSLVAIH 215

Query:   293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
              AC SL L  + +ALAGGV +  +P   I +SK   LSP G C SFD  A+GFV GEG G
Sbjct:   216 LACQSLRLRETDVALAGGVQLTLSPFTAIALSKWSALSPTGRCNSFDANADGFVRGEGCG 275

Query:   353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
             V               +  +++G   N DG++NG+TAPN  +Q  + T   K  ++ P+ 
Sbjct:   276 VVVLKRLADAVRDQDRVLAVVRGSATNSDGRSNGMTAPNALAQRDVITSALKLADVTPDS 335

Query:   413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYH-KNFCALGSVKSNIGHSATAAGVIGMIK 471
             +  +E HGTGT LGDPIEFE+L  ++       ++ CALGSVK+NIGH   AAGV G IK
Sbjct:   336 VNYVETHGTGTVLGDPIEFESLAATYGLGKGQGESPCALGSVKTNIGHLEAAAGVAGFIK 395

Query:   472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
              +L+++   +P  +++   N  I    +  F+ T+   W      +R AA++SFG SGTN
Sbjct:   396 AVLAVQRGHIPRNLHFTRWNPAIDASATRLFVPTESAPWPAAAGPRR-AAVSSFGLSGTN 454

Query:   532 AHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYIS 581
             AH+V+ +     +        +P      +S K  +++   A ++ +++S
Sbjct:   455 AHVVVEQA---PDTAVAAAGGMPYVSALNVSGKTAARVASAAAVLADWMS 501

GO:0034081 "polyketide synthase complex" evidence=ISS

GO:0071766 "Actinobacterium-type cell wall biogenesis" evidence=ISS

GO:0097040 "phthiocerol biosynthetic process" evidence=ISS

GO:0097041 "phenolic phthiocerol biosynthetic process" evidence=ISS

UNIPROTKB|P94996 pks7 "Probable polyketide synthase pks7" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 800 (286.7 bits), Expect = 3.9e-78, P = 3.9e-78
 Identities = 175/501 (34%), Positives = 281/501 (56%)

Query:   115 DDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTIC 172
             + +A++G+  ++P   ++ +  W  +  GR+ VS+ P+ R W +   +D D +A+GK+  
Sbjct:    35 EPVAVVGMGCRYPGGVDSPETLWELVAHGRDAVSEFPADRGWDVAGLFDPDPDAVGKSYT 94

Query:   173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
             +  G L D+  FD  FF I+PSEA  MDPQQRL L+  W  +E AG +P +L GS  GVF
Sbjct:    95 RCGGFLTDVAGFDAEFFGIAPSEALAMDPQQRLLLEVSWEALERAGIDPITLRGSQTGVF 154

Query:   233 VGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
              G     Y      P     Y L G ++S+   RV+Y L LQGP +++DTACSSSLVA+ 
Sbjct:   155 AGVFHGSYGGQGRVPGDLERYGLRGSTLSVASGRVAYVLGLQGPAVSVDTACSSSLVALH 214

Query:   293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
              A  SL LG   +AL GGV ++ TP + I+ S+   LS DG C ++   A+G    EG G
Sbjct:   215 LAVQSLRLGECDLALVGGVTVMATPAMFIEFSRQRALSADGRCKAYAGAADGTAFAEGAG 274

Query:   353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
             V               +  +++G  VNQDG +NG+  PN  +Q R+ T       +   D
Sbjct:   275 VLVLARLADARRLGHPVLALVRGSAVNQDGASNGLATPNGPAQQRVITAALASARLGVAD 334

Query:   413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472
             + ++E HGTGT LGDPIE +A+  ++ +    +    LGS+KSNIGH++ AAGV G+IK+
Sbjct:   335 VDVVEGHGTGTTLGDPIEAQAILATYGQRPADRPLW-LGSIKSNIGHTSAAAGVAGVIKM 393

Query:   473 ILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNA 532
             + +++H VLP T++ ++   H+        + T+ + W +  + +R A ++SFG SGTNA
Sbjct:   394 VQAMRHGVLPKTLHVDVPTPHVDWSAGAVSLLTEPRPWHVPGRPRR-AGVSSFGISGTNA 452

Query:   533 HIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKG 592
             H++L E+    E +     N P+ + + LSA++   L   A+ +  ++  D +N   V+ 
Sbjct:   453 HVIL-EEAPAVEPVGAAHGNDPVAVPWVLSARSAQALTNQARRLLAWVGAD-EN---VRP 507

Query:   593 ITDAFSYIN--SSVQYKVIII 611
             +   +S +N  S   ++ +++
Sbjct:   508 LDVGWSLVNTRSLFDHRAVVV 528

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009405 "pathogenesis" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0071770 "DIM/DIP cell wall layer assembly" evidence=IMP

UNIPROTKB|P96284 pks15 "Putative inactive phenolphthiocerol synthesis polyketide synthase type I Pks15" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 165/426 (38%), Positives = 245/426 (57%)

Query:   115 DDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTIC 172
             + +A++GI  +FP   +     W+ +  GR+ VS+ P+ R W ++  YD D +A GKT  
Sbjct:    47 EPVAVVGIGCRFPGGVDGPDGLWDVVSAGRDVVSEFPTDRGWDVEGLYDPDPDAEGKTYT 106

Query:   173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
             +    L+D   FD  FF I+PSE   MDPQQRL L+  W  +E AG +P SL GS  GV+
Sbjct:   107 RWGAFLDDATGFDAGFFGIAPSEVLAMDPQQRLMLEVSWEALEHAGIDPLSLRGSATGVY 166

Query:   233 VGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
              G   + Y     D      Y L G S+S+   RVSY L LQGP +++DTACSSSLVAI 
Sbjct:   167 TGIFAASYGN--RDTGGLQGYGLTGTSISVASGRVSYVLGLQGPAVSVDTACSSSLVAIH 224

Query:   293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
              A  SL  G   +ALAGGV ++  P I +  S+   L+ DG C +F   A+G   GEG G
Sbjct:   225 WAMSSLRSGECDLALAGGVTVMGLPSIFVGFSRQRGLAADGRCKAFAAAADGTGWGEGAG 284

Query:   353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
             V               +  +++G  VNQDG +NG+TAPN  +Q R+         ++  D
Sbjct:   285 VVVLERLSDARRLGHSVLAVVRGSAVNQDGASNGLTAPNGLAQQRVIQVALANAGLSAAD 344

Query:   413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472
             + ++EAHGT T LGDPIE +AL  ++ +    +    +GS+KSN+GH+  AAGV G+IK+
Sbjct:   345 VDVVEAHGTATTLGDPIEAQALLSTYGQGGPAEQPLWVGSIKSNMGHTQAAAGVAGVIKM 404

Query:   473 ILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNA 532
             + +++H V+P T++ +  +  +   +    + T+ + W +  + +R AA++SFG SGTNA
Sbjct:   405 VQAMRHGVMPATLHVDEPSPRVDWTSGAVSVLTEAREWSVDGRPRR-AAVSSFGISGTNA 463

Query:   533 HIVLME 538
             H++L E
Sbjct:   464 HLILEE 469

GO:0005829 "cytosol" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q05470	PKSL_BACSU	No assigned EC number	0.5031	0.5572	0.1018	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	829
cd00833	421	cd00833, PKS, polyketide synthases (PKSs) polymeri	0.0
COG3321	1061	COG3321, COG3321, Polyketide synthase modules and	0.0
smart00825	298	smart00825, PKS_KS, Beta-ketoacyl synthase	1e-159
pfam00109	243	pfam00109, ketoacyl-synt, Beta-ketoacyl synthase,	4e-89
TIGR02813	2582	TIGR02813, omega_3_PfaA, polyketide-type polyunsat	8e-85
PRK07110	249	PRK07110, PRK07110, polyketide biosynthesis enoyl-	5e-83
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	3e-60
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	1e-59
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	3e-55
cd00828	407	cd00828, elong_cond_enzymes, "elongating" condensi	8e-48
pfam02801	119	pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase	1e-47
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	4e-44
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	3e-43
PTZ00050	421	PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein	1e-40
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	1e-36
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	3e-36
pfam00378	245	pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami	2e-35
PRK05952	381	PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei	5e-35
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	5e-33
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	3e-32
cd06558	195	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme	3e-31
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	2e-30
PRK07910	418	PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei	5e-28
COG1024	257	COG1024, CaiD, Enoyl-CoA hydratase/carnithine race	2e-27
PRK08722	414	PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei	3e-27
PRK06501	425	PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei	4e-25
PRK07967	406	PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei	6e-25
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	3e-23
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	7e-23
cd00832	399	cd00832, CLF, Chain-length factor (CLF) is a facto	7e-17
PRK09116	405	PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei	1e-16
PRK06688	259	PRK06688, PRK06688, enoyl-CoA hydratase; Provision	3e-16
PRK06495	257	PRK06495, PRK06495, enoyl-CoA hydratase; Provision	1e-15
PRK09185	392	PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei	3e-15
PRK07657	260	PRK07657, PRK07657, enoyl-CoA hydratase; Provision	3e-14
PRK08138	261	PRK08138, PRK08138, enoyl-CoA hydratase; Provision	6e-14
PRK09245	266	PRK09245, PRK09245, enoyl-CoA hydratase; Provision	2e-13
PRK09674	255	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase;	3e-11
PLN02600	251	PLN02600, PLN02600, enoyl-CoA hydratase	4e-11
PRK05862	257	PRK05862, PRK05862, enoyl-CoA hydratase; Provision	4e-10
PRK07511	260	PRK07511, PRK07511, enoyl-CoA hydratase; Provision	5e-10
PRK06023	251	PRK06023, PRK06023, enoyl-CoA hydratase; Provision	2e-09
PRK08252	254	PRK08252, PRK08252, enoyl-CoA hydratase; Provision	3e-09
PRK03580	261	PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr	3e-09
PRK07658	257	PRK07658, PRK07658, enoyl-CoA hydratase; Provision	8e-09
PRK05809	260	PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata	9e-09
PRK06190	258	PRK06190, PRK06190, enoyl-CoA hydratase; Provision	1e-08
PRK06494	259	PRK06494, PRK06494, enoyl-CoA hydratase; Provision	2e-08
PRK05870	249	PRK05870, PRK05870, enoyl-CoA hydratase; Provision	5e-08
PRK05981	266	PRK05981, PRK05981, enoyl-CoA hydratase; Provision	5e-08
PRK06210	272	PRK06210, PRK06210, enoyl-CoA hydratase; Provision	6e-08
TIGR01929	259	TIGR01929, menB, naphthoate synthase (dihydroxynap	8e-08
TIGR03210	256	TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd	1e-07
PRK07854	243	PRK07854, PRK07854, enoyl-CoA hydratase; Provision	1e-07
PRK05980	260	PRK05980, PRK05980, enoyl-CoA hydratase; Provision	6e-07
PRK05864	276	PRK05864, PRK05864, enoyl-CoA hydratase; Provision	1e-06
PRK07799	263	PRK07799, PRK07799, enoyl-CoA hydratase; Provision	1e-06
PRK06144	262	PRK06144, PRK06144, enoyl-CoA hydratase; Provision	2e-06
PRK07327	268	PRK07327, PRK07327, enoyl-CoA hydratase; Provision	2e-06
TIGR02440	699	TIGR02440, FadJ, fatty oxidation complex, alpha su	2e-06
TIGR02280	256	TIGR02280, PaaB1, phenylacetate degradation probab	3e-06
PLN02888	265	PLN02888, PLN02888, enoyl-CoA hydratase	3e-06
PRK05995	262	PRK05995, PRK05995, enoyl-CoA hydratase; Provision	1e-05
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	2e-05
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	2e-05
PLN02921	327	PLN02921, PLN02921, naphthoate synthase	3e-05
PRK07509	262	PRK07509, PRK07509, enoyl-CoA hydratase; Provision	3e-05
PRK08150	255	PRK08150, PRK08150, enoyl-CoA hydratase; Provision	5e-05
COG0447	282	COG0447, MenB, Dihydroxynaphthoic acid synthase [C	5e-05
PLN02664	275	PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d	6e-05
PRK08260	296	PRK08260, PRK08260, enoyl-CoA hydratase; Provision	6e-05
PRK08290	288	PRK08290, PRK08290, enoyl-CoA hydratase; Provision	1e-04
PRK06072	248	PRK06072, PRK06072, enoyl-CoA hydratase; Provision	1e-04
cd00829	375	cd00829, SCP-x_thiolase, Thiolase domain associate	2e-04
PRK06127	269	PRK06127, PRK06127, enoyl-CoA hydratase; Provision	3e-04
PRK08788	287	PRK08788, PRK08788, enoyl-CoA hydratase; Validated	4e-04
PRK05674	265	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr	4e-04
PRK07938	249	PRK07938, PRK07938, enoyl-CoA hydratase; Provision	5e-04
pfam13175	320	pfam13175, AAA_15, AAA ATPase domain	6e-04
PRK06445	394	PRK06445, PRK06445, acetyl-CoA acetyltransferase;	0.001
PRK08140	262	PRK08140, PRK08140, enoyl-CoA hydratase; Provision	0.001
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	0.001
PRK11154	708	PRK11154, fadJ, multifunctional fatty acid oxidati	0.002
PRK06563	255	PRK06563, PRK06563, enoyl-CoA hydratase; Provision	0.002
PRK07468	262	PRK07468, PRK07468, enoyl-CoA hydratase; Provision	0.002
PRK06143	256	PRK06143, PRK06143, enoyl-CoA hydratase; Provision	0.002
TIGR03189	251	TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecar	0.003
PRK08321	302	PRK08321, PRK08321, naphthoate synthase; Validated	0.003
TIGR02441	737	TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c	0.003
PRK08272	302	PRK08272, PRK08272, enoyl-CoA hydratase; Provision	0.004
TIGR02437	714	TIGR02437, FadB, fatty oxidation complex, alpha su	0.004

>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

 Score =  638 bits (1647), Expect = 0.0
 Identities = 212/423 (50%), Positives = 285/423 (67%), Gaps = 3/423 (0%)

Query: 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
           + IAI+G++ +FP A +  +FW NLL GR+ +S+IP  RW  D +Y  D    GKT  ++
Sbjct: 1   EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYY-PDPGKPGKTYTRR 59

Query: 175 MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
            G L+D++ FD  FF ISP EAE MDPQQRL L+  W  +EDAGY+P SL+GS  GVFVG
Sbjct: 60  GGFLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVG 119

Query: 235 CAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
            + SDY +L+  DP   +AYA  G S + L  R+SYF +L+GP L +DTACSSSLVA+  
Sbjct: 120 ASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSSSLVALHL 179

Query: 294 ACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353
           AC SL  G   +AL GGV +I +PD+ +  SK+GMLSPDG C  FD  A+G+V GEGVGV
Sbjct: 180 ACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGV 239

Query: 354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDI 413
           ++LK+L DA +DGD IY +I+G  VNQDG+T GITAP+ ++Q  L  + Y +  ++P+DI
Sbjct: 240 VVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDI 299

Query: 414 QLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII 473
             +EAHGTGT LGDPIE EAL + F           +GSVKSNIGH   AAG+ G+IK++
Sbjct: 300 DYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVV 359

Query: 474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAH 533
           L+L+H V+PP +++   N  I  E SP  + T+ + W       R A ++SFGF GTNAH
Sbjct: 360 LALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWP-APAGPRRAGVSSFGFGGTNAH 418

Query: 534 IVL 536
           ++L
Sbjct: 419 VIL 421

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421

>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  604 bits (1560), Expect = 0.0
 Identities = 211/471 (44%), Positives = 297/471 (63%), Gaps = 8/471 (1%)

Query: 114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
            + IAIIG++ +FP A++ ++FW+ L  GR+ ++++P+ RW +D +YD D    GK+  +
Sbjct: 3   IEPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSR 62

Query: 174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFV 233
             G L+D++ FD LFF ISP EAE MDPQQRL L+  W  +EDAG  P SL GS  GVF 
Sbjct: 63  WGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFA 122

Query: 234 GCAVSDY-NKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
           G +V+DY   L+ D +    YA+ G S S+   R+SY L L GP + +DTACSSSLVA+ 
Sbjct: 123 GASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLVAVH 182

Query: 293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
            AC SL LG   +ALAGGV ++ +P+     S  GMLSPDG C +FD  A+G+V GEG G
Sbjct: 183 LACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAG 242

Query: 353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
           V++LK+L DA++DGD IY +I+G  VNQDG++NG+TAPN ++Q  +  +      I+P  
Sbjct: 243 VVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPAT 302

Query: 413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472
           +Q +EAHGTGT LGDPIE  AL   + + +     CA+GSVKSNIGH   AAG+ G+IK 
Sbjct: 303 VQYVEAHGTGTPLGDPIEANALGAVYGEGA-PAQPCAIGSVKSNIGHLEAAAGIAGLIKT 361

Query: 473 ILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNA 532
            L+LKH  +PPT++++  N  I  ++SPF + T+   W       R A ++SFGF GTNA
Sbjct: 362 ALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPW-PTGGGPRRAGVSSFGFGGTNA 420

Query: 533 HIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKD 583
           H++L E     E+      + P   +  LSAK   +L   A  + + +   
Sbjct: 421 HVILEEAPPRAESTIP---SSPR--LLVLSAKTAERLAATAPRLADRLELQ 466

Length = 1061

>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase

 Score =  465 bits (1200), Expect = e-159
 Identities = 164/422 (38%), Positives = 219/422 (51%), Gaps = 124/422 (29%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           IAI+G+S +FP A++ ++FW+ LL G                                  
Sbjct: 1   IAIVGMSCRFPGADDPEEFWDLLLAG---------------------------------- 26

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            L+D+++FD  FF ISP EAE MDPQQRL L+  W  +EDAG +P SL GS  GVFVG +
Sbjct: 27  -LDDVDLFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGVS 85

Query: 237 VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
            SDY                                     + +DTACSSSLVA+  AC 
Sbjct: 86  SSDY------------------------------------SVTVDTACSSSLVALHLACQ 109

Query: 297 SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356
           SL  G   +ALAGGV +I +PD  + +S++GMLSPDG C +FD  A+G+V GEGVGV++L
Sbjct: 110 SLRSGECDMALAGGVNLILSPDTFVGLSRAGMLSPDGRCKTFDASADGYVRGEGVGVVVL 169

Query: 357 KKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416
           K+L DA +DGD I  +I+G  VNQDG++NGITAP+  +Q                     
Sbjct: 170 KRLSDALRDGDPILAVIRGSAVNQDGRSNGITAPSGPAQ--------------------- 208

Query: 417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSL 476
                                            +GSVKSNIGH   AAGV G+IK++L+L
Sbjct: 209 -------------------------------LLIGSVKSNIGHLEAAAGVAGLIKVVLAL 237

Query: 477 KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
           KH V+PPT+++   N HI LE SP  + T+   W     + R A ++SFGF GTNAH++L
Sbjct: 238 KHGVIPPTLHFETPNPHIDLEESPLRVPTELTPWP-PPGRPRRAGVSSFGFGGTNAHVIL 296

Query: 537 ME 538
            E
Sbjct: 297 EE 298

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298

>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain

 Score =  281 bits (721), Expect = 4e-89
 Identities = 105/256 (41%), Positives = 139/256 (54%), Gaps = 20/256 (7%)

Query: 114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
            + +AI G+  +FP     ++FW  LL GR+ + + P+        Y   + A G+    
Sbjct: 1   AEPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPADL---SGLYPPSRVA-GEI--- 53

Query: 174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGS-LCGVF 232
                     FD  FF ISP EAE MDPQQRL L+  W  +EDAG +P SL GS   GVF
Sbjct: 54  ------YGFDFDAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDRTGVF 107

Query: 233 VGCAVSDYNKLIT-----DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
           VG    DY +L        P+  + Y       S+   R+SY L L+GP + +DTACSSS
Sbjct: 108 VGSGSGDYAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSS 167

Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG-MLSPDGHCYSFDQRANGFV 346
           LVA+  A  S+  G   +ALAGGV    TP      S +G +LSPDG C +FD  A+GFV
Sbjct: 168 LVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGFV 227

Query: 347 PGEGVGVLMLKKLKDA 362
            GEGVG ++LK+L +A
Sbjct: 228 RGEGVGAVLLKELSEA 243

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243

>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA

 Score =  296 bits (760), Expect = 8e-85
 Identities = 175/529 (33%), Positives = 273/529 (51%), Gaps = 44/529 (8%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           IAI+G++  F  +  + KFW+ +    + ++ +PS  W  DD+YDSDK+   K+ CK+ G
Sbjct: 9   IAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGG 68

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAG----YN------------ 220
            L +++ F+P+ F + P+  E  D  Q L L      + DAG    Y+            
Sbjct: 69  FLPEVD-FNPMEFGLPPNILELTDISQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGG 127

Query: 221 ----PFSLSGSLCG-----VFVGCAVSDYNKLITDPKMYNAY------ALMGESVSILPA 265
                 SL+  L       VF    V D +  +   K  + Y      +  G   +++  
Sbjct: 128 GQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISG 187

Query: 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK 325
           R++   +L G    +D AC+ SL AI  A   L+ G S++ + GGV   N+P +++  SK
Sbjct: 188 RIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSK 247

Query: 326 SGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN 385
           +   + +     FD  + G + GEG+G++ LK+L+DA++DGD IY +IKG G + DGK  
Sbjct: 248 TPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFK 307

Query: 386 GITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHK 445
            I AP  + Q +   + Y      P+   L+EAHGTGT  GD  EF  L   F++ +  K
Sbjct: 308 SIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQK 367

Query: 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT 505
              ALGSVKS IGH+ + AG  GMIK +L+L HKVLPPTIN +  N  + +ENSPF++NT
Sbjct: 368 QHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNT 427

Query: 506 KCKSWDIK-NKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKF-INNLPIFMVFPLSA 563
           + + W  + +   R A I+SFGF GTN H+VL E    ++  D++    +   ++F  +A
Sbjct: 428 ETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPKHQRDDQYRQRAVAQTLLF--TA 485

Query: 564 KNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIIT 612
            N   L+  + L      KD KN    K     +++   +V+  +  I 
Sbjct: 486 ANEKALV--SSL------KDWKNKLSAKADDQPYAFNALAVENTLRTIA 526

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582

>gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated

 Score =  265 bits (680), Expect = 5e-83
 Identities = 99/223 (44%), Positives = 140/223 (62%), Gaps = 4/223 (1%)

Query: 585 KNS---TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEK 641
           KN+    +   + +AF  I    +YKV+I+TGY NYFA GGT+EGLL +Q G   FT+  
Sbjct: 26  KNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGKGTFTEAN 85

Query: 642 SYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLI 701
            Y + L C IPVIAAMQGHAIG G  +GL+ D  + S ESVY + +M+YGFTPG G+T I
Sbjct: 86  LYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAI 145

Query: 702 FPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELE 761
            P++ G  L +E+L TA  ++G ELK+RG+  PVLPR +VL  +L+LA+ L+   +  L 
Sbjct: 146 LPEKLGLALGQEMLLTARYYRGAELKKRGVPFPVLPRAEVLEKALELARSLAEKPRHSLV 205

Query: 762 LQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804
           L K +     +++L  +   E+ MH+ TF + P V   IE  +
Sbjct: 206 LLKDHLVADRRRRLPEVIEQEVAMHEKTF-HQPEVKRRIESLY 247

Length = 249

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score =  207 bits (527), Expect = 3e-60
 Identities = 91/338 (26%), Positives = 148/338 (43%), Gaps = 19/338 (5%)

Query: 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDP---KMYNAYALMGE 258
              L  +     I DAG +       + GV VG         +      +    Y +   
Sbjct: 11  VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKA 70

Query: 259 SVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD 318
                  +++  L + GP   +  AC+ SL A++ A D++  G   I LAGG   +  P 
Sbjct: 71  MFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPM 130

Query: 319 IHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV 378
                +   + +P+    +FD  A+GFV G+G G L++++L+ A   G  IY  I G   
Sbjct: 131 DCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAA 190

Query: 379 NQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF 438
             DG   G  AP+ +   R   +      +   DI  L AHGTGT +GD  E + L   F
Sbjct: 191 TIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEF 250

Query: 439 NKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN 498
              S      A+ + K+  G+ ++AA V+ + + +L L+H  +PP+I+   L+       
Sbjct: 251 GDKSP-----AVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELD------- 298

Query: 499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
               +N   ++     ++ R A +N FG  GTNA +VL
Sbjct: 299 -EAGLNIVTETTP---RELRTALLNGFGLGGTNATLVL 332

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score =  207 bits (530), Expect = 1e-59
 Identities = 128/429 (29%), Positives = 184/429 (42%), Gaps = 60/429 (13%)

Query: 130 NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFF 189
           N V++FW  LL GR+ +  I  TR+    F       I        G + D   FDP  +
Sbjct: 16  NGVEEFWEALLAGRSGIRPI--TRFDASGFPSR----IA-------GEVPD---FDPEDY 59

Query: 190 NISPSEAEYMDPQQRLFLQNCWTC----IEDAGYNPFSLSGSLCGVFVGCAVSDYNKLIT 245
            +   E   MD     F Q         + DAG +P  L     GV +G  +     L T
Sbjct: 60  -LDRKELRRMDR----FAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGG---LAT 111

Query: 246 DPKMYNAYALMGES-----------VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
             + Y A    G              ++   +V+  L L+GP   + TAC+S   AI  A
Sbjct: 112 IEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDA 171

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRANGFVPGE 349
              + LG + + +AGG   + TP      +    LS     P+     FD+  +GFV GE
Sbjct: 172 ARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGE 231

Query: 350 GVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTKIYKKFN 407
           G GVL+L+ L+ AK  G  IY  I G+G + D     ITAP  + +   R          
Sbjct: 232 GAGVLVLESLEHAKARGAKIYAEILGYGASSDA--YHITAPDPDGEGAARAMRAALADAG 289

Query: 408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVI 467
           ++P DI  + AHGT T L D  E +A+   F + +       + S KS  GH   AAG +
Sbjct: 290 LSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKK---VPVSSTKSMTGHLLGAAGAV 346

Query: 468 GMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGF 527
             I  +L+L+  VLPPTIN    +    L+    ++  + +   I+      A  NSFGF
Sbjct: 347 EAIATLLALRDGVLPPTINLEEPDPECDLD----YVPNEAREAPIRY-----ALSNSFGF 397

Query: 528 SGTNAHIVL 536
            G NA +V 
Sbjct: 398 GGHNASLVF 406

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  195 bits (499), Expect = 3e-55
 Identities = 115/441 (26%), Positives = 183/441 (41%), Gaps = 50/441 (11%)

Query: 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
           +   + I G+       N V++ W  LL G++ +  I  TR+                  
Sbjct: 1   SMRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPI--TRFDASGLG-----------V 47

Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
           K  G ++D++        I+  E  +MD   +L +      +EDAG +         GV 
Sbjct: 48  KIAGEIKDLDDQ------IAKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVA 101

Query: 233 VGCAVSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
           +G  +     +  D          K  + + +     ++    V+    L+GP     TA
Sbjct: 102 IGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTA 161

Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVY-IINTPDIH----IKMSKSGMLSPDGHCYSF 338
           C++   AI  A   + LG + + +AGG    I    I     ++   +    P+     F
Sbjct: 162 CATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPF 221

Query: 339 DQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
           D+  +GFV GEG G L+L++L+ A   G  IY  I G+G   D     ITAP  + +  I
Sbjct: 222 DKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDA--YHITAPAPDGEGAI 279

Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
           R          + P DI  + AHGT T   D  E  A+ +    F  H     + S KS 
Sbjct: 280 RAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAI-KRV--FGEHAKSLPVSSTKSL 336

Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINY-NILNEHIKLENSPFFINTKCKSWDIKNK 515
            GH+  AAG +  I  +L+L+  ++PPTIN  N   E   L+     +  + ++  ++  
Sbjct: 337 TGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLD----VVPNEARTGAVRA- 391

Query: 516 KKRMAAINSFGFSGTNAHIVL 536
               A  NSFGF GTNA +V 
Sbjct: 392 ----ALSNSFGFGGTNASLVF 408

Length = 412

>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

 Score =  174 bits (444), Expect = 8e-48
 Identities = 108/448 (24%), Positives = 174/448 (38%), Gaps = 71/448 (15%)

Query: 117 IAIIGISGQFPKANN---VKKFWNNLLIGRNCVSKI-----PSTRWI---IDDFYDSDKN 165
           + I GI    P       V++FW  L  GR+ ++ +        R +   I        +
Sbjct: 3   VVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRFDRGVAGQIPTGDIPGWD 62

Query: 166 AIGKTICKKMGSLEDIEIFDP-LFFNISP-SEAEYMDPQQRLFLQNCWTCIEDAGYN-PF 222
           A      K+ G      I D      +    EA                 + DAG   P+
Sbjct: 63  A------KRTG------IVDRTTLLALVATEEA-----------------LADAGITDPY 93

Query: 223 SLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSIL--------PARVS-YFLNL 273
            +  S  GV VG  +     L            +   VS             V+   L+ 
Sbjct: 94  EVHPSEVGVVVGSGMGGLRFL--RRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS 151

Query: 274 QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS--- 330
            GP      AC+++L A+  A +++  G + I + GGV      +     +  G LS   
Sbjct: 152 HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDP-LEEGLSGFANMGALSTAE 210

Query: 331 --PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGIT 388
             P+     FD+  +GFV  EG GVL+L++ + A   G  IY  + G     DG    + 
Sbjct: 211 EEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVP 270

Query: 389 APNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFC 448
           A        ++T +  K  ++ +D+ ++ AHGT T   D  E  A+ E            
Sbjct: 271 AGGKGIARAIRTAL-AKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG---ALGAPL 326

Query: 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCK 508
            + + K+  GHS  AAG + +I  + SL+H ++PPT N     + +  +     +    +
Sbjct: 327 PVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTAN----LDDVDPDVEHLSVVGLSR 382

Query: 509 SWDIKNKKKRMAAINSFGFSGTNAHIVL 536
                N K R A +N+FGF G+NA +VL
Sbjct: 383 DL---NLKVRAALVNAFGFGGSNAALVL 407

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407

>gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain

 Score =  164 bits (418), Expect = 1e-47
 Identities = 59/119 (49%), Positives = 74/119 (62%), Gaps = 2/119 (1%)

Query: 370 YCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428
           Y +I+G  VNQDG   NG+TAPN  +Q R          ++P D+  +EAHGTGT LGDP
Sbjct: 1   YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60

Query: 429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY 487
           IE EAL   F           +GSVKSNIGH   AAGV G+IK +L+L+H V+PPT+N 
Sbjct: 61  IEAEALKAVFGP-GRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNL 118

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score =  164 bits (417), Expect = 4e-44
 Identities = 127/431 (29%), Positives = 195/431 (45%), Gaps = 58/431 (13%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N V++FW NLL G++ +  I  TR+   D              K  G ++D   FDP
Sbjct: 13  PLGNGVEEFWENLLAGKSGIGPI--TRFDASDLP-----------VKIAGEVKD---FDP 56

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAV-------SD 239
             + I   EA  MD   +  L      +ED+G +         GV +G  +         
Sbjct: 57  EDY-IDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQ 115

Query: 240 YNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSL 298
           +  L+   P+  + + +    +++   ++S     +GP  A+ TAC++   AI  A   +
Sbjct: 116 HIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLI 175

Query: 299 ILGNSKIALAGGVYIINTPDIHIKMSKSGM-----LS-----PDGHCYSFDQRANGFVPG 348
             G++ + +AGG     TP     +  +G      LS     P+     FD+  +GFV G
Sbjct: 176 QRGDADVMIAGGAEAAITP-----LGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMG 230

Query: 349 EGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTKIYKKF 406
           EG GVL+L++L+ AK  G  IY  I G+G++ D     ITAP    +   R      K  
Sbjct: 231 EGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDA--YHITAPAPEGEGAARAMRAALKDA 288

Query: 407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGV 466
            INP D+  + AHGT T LGD  E +A+   F   +Y     A+ S KS  GH   AAG 
Sbjct: 289 GINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYK---LAVSSTKSMTGHLLGAAGA 345

Query: 467 IGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI-NSF 525
           I  I  +L+L+  ++PPTIN +  +    L+    ++  + +   I        A+ NSF
Sbjct: 346 IEAIFTVLALRDGIVPPTINLDNPDPECDLD----YVPNEAREAKID------YALSNSF 395

Query: 526 GFSGTNAHIVL 536
           GF G NA +V 
Sbjct: 396 GFGGHNASLVF 406

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  162 bits (412), Expect = 3e-43
 Identities = 127/443 (28%), Positives = 190/443 (42%), Gaps = 82/443 (18%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N+V+  W NLL G++ +  I         F  SD         K  G ++D   F+P
Sbjct: 14  PLGNDVESTWKNLLAGKSGIGPI-------THFDTSD------LAVKIAGEVKD---FNP 57

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD 246
             + +S  EA  MD   +  +      +EDAG      +    GV +G  +         
Sbjct: 58  DDY-MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGL------ 110

Query: 247 PKMYNAYALMGESVSILPARVSYF-----------------LNLQGPCLAIDTACSSSLV 289
             +   +  + E     P RVS F                    +GP  +I TAC++   
Sbjct: 111 ETIEEQHITLLEKG---PRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAH 167

Query: 290 AIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGM-----LS-----PDGHCYSFD 339
           AI  A   +  G++ + +AGG     TP     +  +G      LS     P+     FD
Sbjct: 168 AIGDAARLIAYGDADVMVAGGAEAAITP-----LGIAGFAAARALSTRNDDPERASRPFD 222

Query: 340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQ--IR 397
           +  +GFV GEG G+L+L++L+ AK  G  IY  + G+G+  D     +TAP    +   R
Sbjct: 223 KDRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH--MTAPAPDGEGAAR 280

Query: 398 LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI 457
                 K   INP DI  + AHGT T  GD  E +A+   F + +Y     A+ S KS  
Sbjct: 281 AMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYK---VAVSSTKSMT 337

Query: 458 GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKK 517
           GH   AAG +  I  +L+++ +V+PPTIN +  +E   L+  P             N+ +
Sbjct: 338 GHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP-------------NEAR 384

Query: 518 RM---AAI-NSFGFSGTNAHIVL 536
                 A+ NSFGF GTNA +V 
Sbjct: 385 ERKIDYALSNSFGFGGTNASLVF 407

Length = 411

>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional

 Score =  154 bits (392), Expect = 1e-40
 Identities = 110/430 (25%), Positives = 174/430 (40%), Gaps = 43/430 (10%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKI---PSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEI 183
           P     +  W  L+ G++ + K+   P           + +N +    C+ + +  D   
Sbjct: 4   PLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQ-IAAEVDQSE 62

Query: 184 FDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNK 242
           FDP  F  +  E           +      + DA  +  S       GV +G  +     
Sbjct: 63  FDPSDFAPTKRE----SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLAD 118

Query: 243 LITDPKMYNAYALMGESVS--ILPA--------RVSYFLNLQGPCLAIDTACSSSLVAIA 292
           L  +  M   Y      VS   +P          V+    L+GP  +  TAC++    I 
Sbjct: 119 LTDE--MKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIG 176

Query: 293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFV 346
            A   +  G + I + GG     TP      S+   L       P      FD+   GFV
Sbjct: 177 EAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFV 236

Query: 347 PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIR-LQTKIY 403
            GEG G+L+L++L+ A + G  IY  I+G+G + D   + ITAP  + +   R ++  + 
Sbjct: 237 MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDA--HHITAPHPDGRGARRCMENALK 294

Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
              NIN ND+  + AH T T +GD IE +A+ + F      K    + S K  +GH   A
Sbjct: 295 DGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPK--LYVSSTKGGLGHLLGA 352

Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI- 522
           AG +  I  ILSL  +++PPTIN    +    L      +     +  +++     A + 
Sbjct: 353 AGAVESIVTILSLYEQIIPPTINLENPDAECDLN-----LVQGKTAHPLQSID---AVLS 404

Query: 523 NSFGFSGTNA 532
            SFGF G N 
Sbjct: 405 TSFGFGGVNT 414

Length = 421

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  143 bits (362), Expect = 1e-36
 Identities = 111/451 (24%), Positives = 181/451 (40%), Gaps = 60/451 (13%)

Query: 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
           N   I + G+    P    V+ FW  LL G++ +  +      + D              
Sbjct: 2   NKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDF--PVGD-----------LAT 48

Query: 173 KKMGSLEDIEIFDPLFFN----ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSL 228
           K  G + D+       F+    + P +   MD      +      +  AG++P +L    
Sbjct: 49  KIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRE 108

Query: 229 -CGVFVGCAVSDYNKL-----ITD---PKMYNAYALMGESVSILPARVSYFLNLQGPCLA 279
                +G  V  +  +       D   P+  + + +     ++    VS     +GP  A
Sbjct: 109 RTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGA 168

Query: 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGV-YIINTPDIHIKMSKSGM-----LS--- 330
             TAC++ + AI  A   +  G + +A+ GG    I+      ++S +G      LS   
Sbjct: 169 PVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID------RVSLAGFAAARALSTRF 222

Query: 331 ---PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGI 387
              P+     FD+  +GFV GEG G+L+++ L+ A   G      + G+G + D     +
Sbjct: 223 NDAPEQASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYH--M 280

Query: 388 TA-PNTKSQIRLQTKI-YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHK 445
           TA P      R    I  ++  I P ++Q L AH T T +GD  E  A+ + F     H 
Sbjct: 281 TAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG----HV 336

Query: 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT 505
           +  A+ S KS  GH   AAG +  I  IL+L+ ++ PPT+N   L            +  
Sbjct: 337 SGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLN---LENPDPAAEGLDVVAN 393

Query: 506 KCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
           K +  D+       A  N FGF G NA I+ 
Sbjct: 394 KARPMDMD-----YALSNGFGFGGVNASILF 419

Length = 424

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score =  137 bits (346), Expect = 3e-36
 Identities = 63/286 (22%), Positives = 106/286 (37%), Gaps = 67/286 (23%)

Query: 252 AYALMGESVSILPARVSYFLNLQ-GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGG 310
                    S    +++Y L +  GP  +++ AC++ L A+A A   +  G + I LAGG
Sbjct: 35  GTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGG 94

Query: 311 VYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIY 370
                                             FV G+G    +++  + A + G    
Sbjct: 95  S-------------------------------EEFVFGDGAAAAVVESEEHALRRGAHPQ 123

Query: 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE 430
             I       DG +  + A + +   R   K  +   + P+DI  +EAHGTGT +GD +E
Sbjct: 124 AEIVSTAATFDGAS-MVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVE 182

Query: 431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL 490
                +            A+ +     GH   AAG+  + +++L L+H+ +PPT      
Sbjct: 183 LALGLDPDG-----VRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT------ 231

Query: 491 NEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
                                   ++ R   +  FG  GTNA +VL
Sbjct: 232 -----------------------PREPRTVLLLGFGLGGTNAAVVL 254

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family

 Score =  134 bits (340), Expect = 2e-35
 Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 6/218 (2%)

Query: 593 ITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKI---QKGISRFTDEKSYCMPLY- 648
           +  A   +      K I++TG    F+ G   + +      Q+       +  +   L  
Sbjct: 30  LIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAAEPLAQQAQFSLEAQDLW-SRLED 88

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
              PVIAA+ G+A+G G  + L CDY I ++ + +  P ++ G  PGAG T   P+  G 
Sbjct: 89  LPKPVIAAVNGYALGGGLELALACDYRIAADNAKFGLPEVKLGIIPGAGGTQRLPRIIGV 148

Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYS 768
             + E+L T    + +E  + G+   V+P +Q++  +++LA++L+      L   K    
Sbjct: 149 SAALEMLLTGRRIRAQEALKMGLVDKVVPEEQLVEEAIELAQRLADKPPLALAALKAAMR 208

Query: 769 HSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK 806
            +L+  L  +    L ++     +   V   I+ + +K
Sbjct: 209 AALEDALPEVRAQALRLY-PAPFSTDDVKEGIQAFLEK 245

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245

>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  137 bits (347), Expect = 5e-35
 Identities = 98/339 (28%), Positives = 151/339 (44%), Gaps = 43/339 (12%)

Query: 214 IEDAGYNPFSLSGSL--CGVFVG----CAVSDYNKL----ITDPKMYNAYALMGESVSIL 263
           ++DAG     L+  L  CGV +G    C    + KL           +    +   +  L
Sbjct: 68  LKDAG-----LTPPLTDCGVVIGSSRGCQGQ-WEKLARQMYQGDDSPDEELDLENWLDTL 121

Query: 264 PARVSYF----LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
           P + +      +  QGP LA   AC++ L AIA   + +  G  +  +AG V    TP  
Sbjct: 122 PHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLT 181

Query: 320 HIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVN 379
                + G L+  G  Y FD++  G V GEG  +L+L+  + A+K G  IY  I G+G+ 
Sbjct: 182 LAGFQQMGALAKTG-AYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLT 240

Query: 380 QDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN 439
            D        P+ KS I    +   +  + P DI  + AHGT T+L D  E   L ++  
Sbjct: 241 CDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQRE-ANLIQAL- 298

Query: 440 KFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499
            F  H+   A+ S K   GH+  A+G +G+   +L+L+H+ LPP +          L+  
Sbjct: 299 -FP-HR--VAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVG---------LQEP 345

Query: 500 PFFIN--TKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            F +N   + +   ++N         SFGF G NA I L
Sbjct: 346 EFDLNFVRQAQQSPLQN-----VLCLSFGFGGQNAAIAL 379

Length = 381

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score =  132 bits (334), Expect = 5e-33
 Identities = 88/279 (31%), Positives = 133/279 (47%), Gaps = 21/279 (7%)

Query: 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKS 326
           VS     QGP  A  TAC++   +I  A   +  G++ + +AGG             S+S
Sbjct: 167 VSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRS 226

Query: 327 GMLS------PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQ 380
             LS      P      FD   +GFV GEG GVL+L++L+ AK+ G  IY  ++G+G++ 
Sbjct: 227 RALSTKFNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSG 286

Query: 381 DGKTNGITAPNT--KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF 438
           D   + IT P+   +  +   T+  ++  ++PN +  + AH T T LGD +E  A+   F
Sbjct: 287 DA--HHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVF 344

Query: 439 NKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN 498
           ++ +      A  S K   GH   AAG +  I  +L++ H + PPT+N         LE 
Sbjct: 345 SEHATSGGL-AFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLN---------LER 394

Query: 499 -SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
             P F +        K    R A  NSFGF GTNA ++ 
Sbjct: 395 PDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLF 433

Length = 437

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score =  129 bits (327), Expect = 3e-32
 Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 25/277 (9%)

Query: 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALA-GGVYIINTPDIHIKMSK 325
            S    ++G    +  A +S  +A+  A   +  G+    +A G +  ++  +     S 
Sbjct: 150 CSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSL 209

Query: 326 SGMLS------PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVN 379
             M S      P+  C  FDQ  +GF+ GE  G ++L+  + A++ G   Y  + GW + 
Sbjct: 210 GAMGSDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMR 269

Query: 380 QDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN 439
            D        P+ + ++R+     ++  + P DI  +  HGTG+ LGD  E  AL     
Sbjct: 270 LDANRG--PDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAAL----- 322

Query: 440 KFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499
            F+       + + KS  GH  +AAG++ +I  +L ++   L P+ N   L+E I  +  
Sbjct: 323 -FASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRN---LDEPI--DER 376

Query: 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
             ++ +  +S  I+      A   SFGF G N  +VL
Sbjct: 377 FRWVGSTAESARIRY-----ALSLSFGFGGINTALVL 408

Length = 410

>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

 Score =  121 bits (305), Expect = 3e-31
 Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 23/181 (12%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG--------------TKEGLLKIQ 631
           +  ++  +  A     +    +V+++TG    F  G                +  + ++Q
Sbjct: 24  SLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEEARAFIRELQ 83

Query: 632 KGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG 691
           + +            L    PVIAA+ G A+G G  + L CD  I +E++ +  P ++ G
Sbjct: 84  ELLRAL---------LRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLG 134

Query: 692 FTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
             PG G T   P+  G   +RE+L T      +E  E G+   V+P +++L  +L+LA++
Sbjct: 135 LVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDEELLAAALELARR 194

Query: 752 L 752
           L
Sbjct: 195 L 195

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  124 bits (313), Expect = 2e-30
 Identities = 115/404 (28%), Positives = 174/404 (43%), Gaps = 50/404 (12%)

Query: 163 DKNAIGKTICKKMGSLEDIEIFDPLFF---------NISPSEAEYMDPQQ--------RL 205
           +K +  K IC     ++ I +FD   F         +  P+E   MDP++        +L
Sbjct: 18  NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEV--MDPKEVKKADRFIQL 75

Query: 206 FLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVS-----DYNKLITD---PKMYNAYALMG 257
            L+     ++DAG+ P  L     GV     +      + N +I     P+  + + +  
Sbjct: 76  GLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPS 135

Query: 258 ESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP 317
             V++L   +S    L+GP L+  TAC++   AI  A  +++LG +   L  G      P
Sbjct: 136 ALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICP 195

Query: 318 DIHIKMSKSGMLS-----PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCI 372
                 +    LS     P      FD+  +GFV GEG G L+L++ + AKK G  IY  
Sbjct: 196 VGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALVLEEYESAKKRGAKIYAE 255

Query: 373 IKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE 432
           I G+G  + G  N IT+P  +  +R      +    NP  I  + AHGT T   D  E  
Sbjct: 256 IIGFG--ESGDANHITSPAPEGPLRAMKAALEMAG-NPK-IDYINAHGTSTPYNDKNETA 311

Query: 433 ALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN 491
           AL E F      K       S K  IGH   AAG I  +  I++++  +LPPTIN    +
Sbjct: 312 ALKELFGS----KEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPD 367

Query: 492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIV 535
               L+  P   N   K+      +  +   NSFGF GTN  ++
Sbjct: 368 PECDLDYIP---NVARKA------ELNVVMSNSFGFGGTNGVVI 402

Length = 406

>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  117 bits (294), Expect = 5e-28
 Identities = 83/262 (31%), Positives = 126/262 (48%), Gaps = 22/262 (8%)

Query: 282 TACSSSLVAIAHACDSLILGNSKIALAGGV--YIINTP-----DIHIKMSKSGMLSPDGH 334
           +AC+S   AIA A   ++LG + IA+ GGV   I   P      + I MS +    P G 
Sbjct: 169 SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNND-DPAGA 227

Query: 335 CYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKS 394
           C  FD+  +GFV GEG  +++++  + AK  G +I   I G  +  DG       PN + 
Sbjct: 228 CRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGER 287

Query: 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVK 454
                T+  +   + P DI  + AH TGT +GD  E +A+    N    H+   A+ + K
Sbjct: 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAI---NNALGGHR--PAVYAPK 342

Query: 455 SNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN 514
           S +GHS  A G +  I  +L+L+  V+PPT+N   L+  I L+     +  + +  +   
Sbjct: 343 SALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLD----VVAGEPRPGNY-- 396

Query: 515 KKKRMAAINSFGFSGTNAHIVL 536
              R A  NSFGF G N  +  
Sbjct: 397 ---RYAINNSFGFGGHNVALAF 415

Length = 418

>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

 Score =  112 bits (281), Expect = 2e-27
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 6/210 (2%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRFTDEKSY 643
           N  ++  + +A     +    +V+++TG    F+ G   + LL  + G            
Sbjct: 30  NLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQD 89

Query: 644 CMP--LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLI 701
            +        PVIAA+ G+A+G G  + L CD  I +E++ +  P +  G  PG G T  
Sbjct: 90  LLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQR 149

Query: 702 FPQRFGKILSREILFTASEFKGKELKERG-ISMPVLPRKQVLFYSLKLAKKLSLLSKKEL 760
            P+  G+  ++E+L T       E  E G +   V   +++L  +L+LA++L+      L
Sbjct: 150 LPRLLGRGRAKELLLTGEPISAAEALELGLVDEVVPDAEELLERALELARRLA-APPLAL 208

Query: 761 ELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
              K+    +L+  L+     E       F
Sbjct: 209 AATKRLVRAALEADLAEALEAEALAFARLF 238

Length = 257

>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  115 bits (288), Expect = 3e-27
 Identities = 103/437 (23%), Positives = 187/437 (42%), Gaps = 48/437 (10%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P  N V+  W  LL G++ +  I        + +D+   +      +  G
Sbjct: 6   VVVTGMGMLSPVGNTVESSWKALLAGQSGIVNI--------EHFDTTNFST-----RFAG 52

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTC----IEDAGYNPFSLSGSLCGVF 232
            ++D   F+   + +S  +A  MD    LF+Q         ++D+G      +    GV 
Sbjct: 53  LVKD---FNCEEY-MSKKDARKMD----LFIQYGIAAGIQALDDSGLEVTEENAHRIGVA 104

Query: 233 VGCAV-------SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTAC 284
           +G  +       + +  L+   P+  + + +    V+++   +S    L+GP +AI TAC
Sbjct: 105 IGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTAC 164

Query: 285 SSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFD 339
           ++ L  I HA   +  G++   +AGG    +TP        +  LS     P      +D
Sbjct: 165 TTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWD 224

Query: 340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQ 399
           +  +GFV G+G G+++L++ + AK  G  IY  + G+G++ D       + +        
Sbjct: 225 KDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAM 284

Query: 400 TKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGH 459
               +   +    I  + AHGT T  GD  E + +  +  +    +    + S KS  GH
Sbjct: 285 EAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQ--VLVSSTKSMTGH 342

Query: 460 SATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRM 519
              AAG +  I  ++SL  +++PPTIN +   E + ++  P            K +    
Sbjct: 343 LLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTAR--------KVESMEY 394

Query: 520 AAINSFGFSGTNAHIVL 536
           A  NSFGF GTN  ++ 
Sbjct: 395 AICNSFGFGGTNGSLIF 411

Length = 414

>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  108 bits (272), Expect = 4e-25
 Identities = 80/266 (30%), Positives = 118/266 (44%), Gaps = 29/266 (10%)

Query: 282 TACSSSLVAIAHACDSLILGNSKIALA----GGVYIINTPDIHIKMSKSGMLS-----PD 332
           TAC+S   AI    +++  G +  AL     G V    + +  I+ S    LS     P+
Sbjct: 173 TACASGATAIQLGVEAIRRGETDRALCIATDGSV----SAEALIRFSLLSALSTQNDPPE 228

Query: 333 GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT 392
                F +  +GFV  EG G L+L+ L+ A   G  I  I+ G G   D      ++P+ 
Sbjct: 229 KASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDG 288

Query: 393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGS 452
              I           + P  I  + AHGT T   D +E+  L   F +         + S
Sbjct: 289 SPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLAS---IPVSS 345

Query: 453 VKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDI 512
            KS IGH+ TAAG +  +  +L+++   LPPTINY+  +  I L+  P   N        
Sbjct: 346 NKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVP---NVA------ 396

Query: 513 KNKKKRMAAI--NSFGFSGTNAHIVL 536
             +  R+ A+  NSFGF G NA +VL
Sbjct: 397 --RDARVTAVLSNSFGFGGQNASLVL 420

Length = 425

>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score =  107 bits (270), Expect = 6e-25
 Identities = 96/345 (27%), Positives = 148/345 (42%), Gaps = 48/345 (13%)

Query: 214 IEDAGYNPFSLSGSLCGVFVGC---------AVSDYNKLITDPKMYNAYAL---MGESVS 261
           I DAG +   +S    G+  G            +D  +    PK    YA+   M  +VS
Sbjct: 83  IADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVS 142

Query: 262 ILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI 321
              A ++    ++G   +I +AC++S   I +A + + LG   I  AGG       ++  
Sbjct: 143 ---ACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGG-----GEELDW 194

Query: 322 KMS----KSGMLS------PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYC 371
           +MS      G LS      P+    ++D   +GFV   G GV+++++L+ A   G  IY 
Sbjct: 195 EMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYA 254

Query: 372 IIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEF 431
            I G+G   DG    + AP+ +  +R         +     I  +  HGT T +GD  E 
Sbjct: 255 EIVGYGATSDGYD--MVAPSGEGAVRCMQMALATVD---TPIDYINTHGTSTPVGDVKEL 309

Query: 432 EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN 491
            A+ E F          A+ + KS  GHS  AAGV   I  +L ++H  + P+ N   L+
Sbjct: 310 GAIREVFG-----DKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELD 364

Query: 492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
              +    P  I T+       N +      NSFGF GTNA +V 
Sbjct: 365 P--QAAGMP--IVTET----TDNAELTTVMSNSFGFGGTNATLVF 401

Length = 406

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score =  101 bits (253), Expect = 3e-23
 Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 20/297 (6%)

Query: 247 PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIA 306
           PK  + + +    V++    VS   + +GP  A  TAC++ + AI  A   +    + +A
Sbjct: 54  PKRLSPFTVPSFLVNLAAGHVSIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVA 113

Query: 307 LAGGV-YIINTPDIH-----IKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360
           L GG   +I+T  +        +S     +P+     FD   +GFV GEG G+L++++L+
Sbjct: 114 LCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELE 173

Query: 361 DAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG 420
            A   G      I G+G + D       A +     R      ++  I P  +Q L AH 
Sbjct: 174 HALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHA 233

Query: 421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480
           T T +GD  E  A+   F +     N  A+ S KS  GH   AAG +  I  +L+L+ ++
Sbjct: 234 TSTPVGDLGEINAIKHLFGE----SNALAITSTKSATGHLLGAAGGLETIFTVLALRDQI 289

Query: 481 LPPTINYNILNEHIKLEN-SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
           +P T+N         LEN  P        + + +      A  N FGF+G NA I+L
Sbjct: 290 VPATLN---------LENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILL 337

Length = 342

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score =  103 bits (257), Expect = 7e-23
 Identities = 100/370 (27%), Positives = 159/370 (42%), Gaps = 45/370 (12%)

Query: 191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP---FSLSGSLCGVFVGCAVSD---YNKLI 244
           ++P  ++ MD      L      + D G        L  + CGV +G A+     +N  I
Sbjct: 188 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAI 247

Query: 245 ----TDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLIL 300
                  +  N + +   + ++  A ++  L   GP  +I TAC++S   I +A + +I 
Sbjct: 248 EALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 307

Query: 301 GNSKIALAGGVYIINTPDIHIKMSKSGMLS----------PDGHCYSFDQRANGFVPGEG 350
           G + + L GG    +   I I +   G ++          P      +D   +GFV GEG
Sbjct: 308 GEADVMLCGGS---DAAIIPIGL--GGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEG 362

Query: 351 VGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINP 410
            GVL+L++L+ AKK G +IY    G     D        P     I    K   +  ++ 
Sbjct: 363 AGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSK 422

Query: 411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470
            D+  + AH T TK GD  E++AL   F +    +    + S KS IGH   AAG +  I
Sbjct: 423 EDVNYINAHATSTKAGDLKEYQALMRCFGQNPELR----VNSTKSMIGHLLGAAGAVEAI 478

Query: 471 KIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRM----AAINSFG 526
             + +++   + P IN         LEN    ++TK     +  KK+R+    A  NSFG
Sbjct: 479 ATVQAIRTGWVHPNIN---------LENPESGVDTKVL---VGPKKERLDIKVALSNSFG 526

Query: 527 FSGTNAHIVL 536
           F G N+ I+ 
Sbjct: 527 FGGHNSSILF 536

Length = 540

>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

 Score = 83.6 bits (207), Expect = 7e-17
 Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 29/226 (12%)

Query: 273 LQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP---DIHIKMSKSGML 329
           ++GP   +    +  L A+A A   L+   + + ++GGV     P      +    SG L
Sbjct: 150 MRGPSGVVVAEQAGGLDALAQA-RRLVRRGTPLVVSGGVDSALCPWGWVAQLS---SGRL 205

Query: 330 SPDG---HCY-SFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN 385
           S        Y  FD  A G+VPGEG  +L+L+    A++ G  +Y  I G+    D    
Sbjct: 206 STSDDPARAYLPFDAAAAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPG 265

Query: 386 GITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHK 445
               P     IRL         + P D+ ++ A   G    D  E  AL   F       
Sbjct: 266 SGRPPGLARAIRLA---LADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP----- 317

Query: 446 NFCALGSV-----KSNIGHSATAAGVIGMIKIILSLKHKVLPPTIN 486
                  V     K+  G        + +   +L+L+  V+PPT+N
Sbjct: 318 -----RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVN 358

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399

>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 82.7 bits (205), Expect = 1e-16
 Identities = 74/286 (25%), Positives = 114/286 (39%), Gaps = 38/286 (13%)

Query: 264 PARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGG--------VYIIN 315
              V  F  L+G  +   +AC+S    I +A +++  G   + LAGG          + +
Sbjct: 144 AVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFD 203

Query: 316 TPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG 375
           T       + +  L+P      FD   +G V GEG G L+L++L+ AK  G  IY  I G
Sbjct: 204 TLFATSTRNDAPELTPR----PFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVG 259

Query: 376 WGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALC 435
           +G N DG    +T P  ++         K   + P DI  + AHGT T  GD  E +A  
Sbjct: 260 FGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATA 317

Query: 436 ESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK 495
             F           + S+KS  GH+  A G +     I  +      PT+N   L +   
Sbjct: 318 AVF------GARMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLN---LTQ--- 365

Query: 496 LENSPFFINTKCKSWD-----IKNKKKRMAAINSFGFSGTNAHIVL 536
                  ++  C + D      +         N+F F G N  ++ 
Sbjct: 366 -------VDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIF 404

Length = 405

>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional

 Score = 79.1 bits (196), Expect = 3e-16
 Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 29/197 (14%)

Query: 585 KNS---TVVKGITDAFSYINSSVQYKVIIITGYENYFACGG----------TKEGLLKIQ 631
           KN+    + + + DA     +    +V+++TG    F+ GG               L   
Sbjct: 26  KNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDELAPV 85

Query: 632 ----KGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPY 687
               + I+     K          PV+AA+ G A+G G ++ L CD    SE + +  P+
Sbjct: 86  NRFLRAIAAL--PK----------PVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPF 133

Query: 688 MRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLK 747
            + G  P AG + + P+  G+  + E+L        +E    G+   V+P  ++   +  
Sbjct: 134 AKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVVPAAELDAEADA 193

Query: 748 LAKKLSLLSKKELELQK 764
            A KL+      L   K
Sbjct: 194 QAAKLAAGPASALRYTK 210

Length = 259

>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional

 Score = 77.4 bits (191), Expect = 1e-15
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 23/202 (11%)

Query: 578 NYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--- 634
           N +S++L++      +   F  I+     +V+++TG    F  G   +G   + KG    
Sbjct: 25  NALSRELRDE-----LIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGPGDL 79

Query: 635 ---SRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG 691
              +R T E  + +   C  PVIAA+ G A+GAG  +   CD  + SE +V+  P +  G
Sbjct: 80  RAHNRRTRECFHAI-RECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVG 138

Query: 692 FTPGA--GSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLA 749
              G      L     FG  L+R ++ T       EL  RG+    LP ++++  ++++A
Sbjct: 139 LAGGGKHAMRL-----FGHSLTRRMMLTGYRVPAAELYRRGVIEACLPPEELMPEAMEIA 193

Query: 750 KKLSLLSKKELELQKKYYSHSL 771
           +   + SK  L    +    +L
Sbjct: 194 R--EIASKSPLAT--RLAKDAL 211

Length = 257

>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 78.3 bits (194), Expect = 3e-15
 Identities = 71/293 (24%), Positives = 106/293 (36%), Gaps = 63/293 (21%)

Query: 264 PAR-VSYFLNLQGPCLAIDTACSSSLVAIAHA--------CDSLILGNSKIALAGGVYII 314
            A  +  +L L GP   I TACSSS    A A        CD         A+ GGV   
Sbjct: 139 LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCD--------AAIVGGV--- 187

Query: 315 NTPDIHIKMSKSG-----MLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDI 369
              D   +++ +G      LSP   C  F    +G   GE     +L      ++D   +
Sbjct: 188 ---DSLCRLTLNGFNSLESLSP-QPCRPFSANRDGINIGEAAAFFLL-----EREDDAAV 238

Query: 370 YCIIKGWGVNQDGKTNGITAPNT--KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD 427
              + G G + D   + ++AP+      I    +      + P DI  +  HGT T L D
Sbjct: 239 --ALLGVGESSDA--HHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLND 294

Query: 428 PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY 487
            +E  A+   F       +     S K   GH+  AAG +      L+L+H + P   N 
Sbjct: 295 AMESRAVAAVFG------DGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNT 348

Query: 488 NILNEHIK----LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
              +  +     +EN+                  R    NSF F G N  ++ 
Sbjct: 349 GQPDPALPPLYLVENAQ-------------ALAIRYVLSNSFAFGGNNCSLIF 388

Length = 392

>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional

 Score = 73.2 bits (180), Expect = 3e-14
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 22/191 (11%)

Query: 600 INSSVQYKVIIITGYENYFACGGT-------------KEGLLKIQKGISRFTDEKSYCMP 646
           IN     +V+I+TG      C G              +  +  I+  +     E+   +P
Sbjct: 43  INEEANVRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSLIRTTMEMV--EQ---LP 97

Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
                PVIAA+ G A+G G  + L CD+ I +E +            PGAG T   P+  
Sbjct: 98  Q----PVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLI 153

Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKY 766
           G   ++E+++T      +E KE G+   V+P   +   ++++A+K++      +   K+ 
Sbjct: 154 GVGRAKELIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAIEIAEKIASNGPIAVRQAKEA 213

Query: 767 YSHSLQKKLST 777
            S+ +Q  L T
Sbjct: 214 ISNGIQVDLHT 224

Length = 260

>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional

 Score = 72.4 bits (178), Expect = 6e-14
 Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 19/181 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKE----GLLKIQKGISRFTDE 640
           N  V + + + F+ ++     + I++TG E  FA G   KE    G +++     R T+ 
Sbjct: 33  NMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGAIEMYL---RHTER 89

Query: 641 KSYCMPL-YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
             Y   +  C  PVIAA+ G+A+G G  + +  D  +  E + +  P ++ G  PGAG T
Sbjct: 90  --YWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGT 147

Query: 700 LIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL 755
               QR     GK  +  +  T       E    G+   V+  +Q L  +L+LA++++ +
Sbjct: 148 ----QRLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVEDEQTLPRALELAREIARM 203

Query: 756 S 756
            
Sbjct: 204 P 204

Length = 261

>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 26/209 (12%)

Query: 588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGT------KEGL-----LKI----QK 632
             V  +  A + IN+    + +I+TG    F+ GG       + G        I    + 
Sbjct: 31  DAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRH 90

Query: 633 GISRFTDEKSYCMPLY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG 691
           GI R        + LY  ++PVIAA+ G AIGAG  +   CD  I SE + +   +++ G
Sbjct: 91  GIQRIP------LALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLG 144

Query: 692 FTPGAGSTLIFPQRFGKILSR--EILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLA 749
             PG G   + P+  G  ++R  E+ FT          E G+   V+P  Q+L  +  LA
Sbjct: 145 LIPGDGGAWLLPRIIG--MARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAARALA 202

Query: 750 KKLSLLSKKELELQKKYYSHSLQKKLSTI 778
           ++++      L L K+         L T+
Sbjct: 203 ERIAANPPHALRLTKRLLREGQHASLDTL 231

Length = 266

>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional

 Score = 64.4 bits (157), Expect = 3e-11
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 17/166 (10%)

Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKI-----PVIAAMQGHAI 662
           V +ITG   +FA G     + + +   +   D +     L+ ++     P+IAA+ G+A+
Sbjct: 49  VCVITGNARFFAAGADLNEMAE-KDLAATLNDPR---PQLWQRLQAFNKPLIAAVNGYAL 104

Query: 663 GAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF----GKILSREILFTA 718
           GAG  + L CD  I  E + +  P +  G  PGAG T    QR     GK L+ +++ T 
Sbjct: 105 GAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGT----QRLIRSVGKSLASQMVLTG 160

Query: 719 SEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQK 764
                ++ ++ G+   V P +  L  +L+LA K++  S   L   K
Sbjct: 161 ESITAQQAQQAGLVSEVFPPELTLERALQLASKIARHSPLALRAAK 206

Length = 255

>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase

 Score = 64.1 bits (156), Expect = 4e-11
 Identities = 32/103 (31%), Positives = 54/103 (52%)

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKIL 710
           IP IA ++G A+G G  + L CD  I  EE+V+  P       PGAG T   P+  G+  
Sbjct: 89  IPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSR 148

Query: 711 SREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
           ++E++FT      +E    G+    +P  +    +L+LA++++
Sbjct: 149 AKELIFTGRRIGAREAASMGLVNYCVPAGEAYEKALELAQEIN 191

Length = 251

>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional

 Score = 60.8 bits (148), Expect = 4e-10
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           N  ++  +  A +  ++      I+ITG E  FA G      +K    +S F D   Y  
Sbjct: 29  NDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGAD----IKEMADLS-FMD--VYKG 81

Query: 646 PLY--------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
                       + PVIAA+ G+A+G G  + + CD  I ++ + +  P ++ G  PG G
Sbjct: 82  DYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMG 141

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLS 756
            +    +  GK  + ++  T       E +  G+   V+P  ++L  +L  A  ++  S
Sbjct: 142 GSQRLTRAVGKAKAMDLCLTGRMMDAAEAERAGLVSRVVPADKLLDEALAAATTIASFS 200

Length = 257

>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional

 Score = 60.8 bits (148), Expect = 5e-10
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 14/154 (9%)

Query: 609 IIITGYENYFACGGTKEGLLKI-QKGISRFTDEKSYCMPLYCKI-----PVIAAMQGHAI 662
           +++TG   +F  GG    LL+   K  S               I     PVIAA++G A 
Sbjct: 51  VVLTGAGGFFCAGGNLNRLLENRAKPPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAAA 110

Query: 663 GAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR----EILFTA 718
           GAG+++ L CD  + + ++ +   Y++ G TP  G +  F  R    L R    E+L   
Sbjct: 111 GAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSW-FLARA---LPRQLATELLLEG 166

Query: 719 SEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
                + L   G+   +    Q L  +L LA +L
Sbjct: 167 KPISAERLHALGVVNRLAEPGQALAEALALADQL 200

Length = 260

>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 2/163 (1%)

Query: 593 ITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEK-SYCMPLY-CK 650
           +  A    ++    +  +  G E  F+ G   +  L    G + F  E   + + L   +
Sbjct: 38  MAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSFGSEILDFLIALAEAE 97

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKIL 710
            P+++ + G AIG G  + L CD T  S  S++++P++     P AGS+L+ P+  G   
Sbjct: 98  KPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQR 157

Query: 711 SREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
           +  +L     F  +  +E G+   ++  + V   +LK A++L+
Sbjct: 158 AFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAETLKAAEELA 200

Length = 251

>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional

 Score = 58.1 bits (141), Expect = 3e-09
 Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 13/174 (7%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ------KGISRFTD 639
           N+ V +G+  A   +++     V I+TG    F  G   +   + +      +G    T+
Sbjct: 28  NAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARGERPSIPGRGFGGLTE 87

Query: 640 EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
                     + P+IAA++G+A+  G+ + L CD  + + ++ +  P ++ G     G  
Sbjct: 88  RPP-------RKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGL 140

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
           L  P+R    ++ E+  T      +   E G+   +    Q L  +L+LA++++
Sbjct: 141 LRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPGQALDAALELAERIA 194

Length = 254

>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 28/102 (27%), Positives = 55/102 (53%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVIAA+ G+A G G+ + L  D+ + ++ + +  P  + G  P +G  L  P+R    ++
Sbjct: 96  PVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIA 155

Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
            E++ T      +E    GI   V+P+ +++  + +LA++L 
Sbjct: 156 NEMVMTGRRMDAEEALRWGIVNRVVPQAELMDRARELAQQLV 197

Length = 261

>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional

 Score = 57.0 bits (138), Expect = 8e-09
 Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 6/181 (3%)

Query: 587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMP 646
           S V+  +++    +      +V++I G   +F+ G   +    + +   + T+       
Sbjct: 27  SQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVTEA-EQATELAQLGQV 85

Query: 647 LY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLI 701
            +        PVIAA+ G A+G G  + + C     +E +    P +  G  PG   T  
Sbjct: 86  TFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQR 145

Query: 702 FPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELE 761
            P+  GK  + E++ T+    G E  + G+   V P + +L  + KLAKK++  S     
Sbjct: 146 LPRYVGKAKALEMMLTSEPITGAEALKWGLVNGVFPEETLLDDAKKLAKKIAGKSPATTR 205

Query: 762 L 762
            
Sbjct: 206 A 206

Length = 257

>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated

 Score = 56.7 bits (137), Expect = 9e-09
 Identities = 35/131 (26%), Positives = 65/131 (49%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVIAA+ G A+G G  + + CD  I SE++ +  P +  G TPG G T    +  G   +
Sbjct: 99  PVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKA 158

Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSL 771
           +E+++T      +E    G+   V+  ++++  +  LA K++  +   ++L K   +  +
Sbjct: 159 KELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAKALANKIAANAPIAVKLCKDAINRGM 218

Query: 772 QKKLSTIFLHE 782
           Q  + T    E
Sbjct: 219 QVDIDTAVAIE 229

Length = 260

>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 14/177 (7%)

Query: 578 NYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGT--KEGLLKIQKGIS 635
           N +S  L      + +  A +  ++     V+++TG +  F C G   KE  L       
Sbjct: 26  NALSAAL-----RRALFAALAEADADDDVDVVVLTGADPAF-CAGLDLKE--LGGDGSAY 77

Query: 636 RFTDEKSYCMPLY--CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT 693
              D      P +   + PVI A+ G A+  G  + L CD  I SE + +   + R G  
Sbjct: 78  GAQDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGIL 137

Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKER-GISMPVLPRKQVLFYSLKLA 749
           PG G ++  PQ+ G   +R +  T  +F       R G+   V+P  ++L  + +LA
Sbjct: 138 PGWGLSVRLPQKVGIGRARRMSLTG-DFLDAADALRAGLVTEVVPHDELLPRARRLA 193

Length = 258

>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional

 Score = 55.8 bits (135), Expect = 2e-08
 Identities = 26/94 (27%), Positives = 44/94 (46%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
              P+IAA+ G A+G G+ + L CD  + +E + +  P  R G    AG     P++ G 
Sbjct: 93  LDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGL 152

Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
             +  ++ T      +E  E G    V+P  ++L
Sbjct: 153 KRAMGMILTGRRVTAREGLELGFVNEVVPAGELL 186

Length = 259

>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional

 Score = 54.7 bits (132), Expect = 5e-08
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 621 GGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE 680
              ++GL +I  G               C +P IAA+ G A+GAG  + L  D  I   +
Sbjct: 75  RPAEDGLRRIYDGFLAVAS---------CPLPTIAAVNGAAVGAGLNLALAADVRIAGPK 125

Query: 681 SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735
           +++ + + + G  PG G+T +  +  G  ++R  L     F  +     G+++ V
Sbjct: 126 ALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLALMV 180

Length = 249

>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional

 Score = 54.7 bits (132), Expect = 5e-08
 Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 12/192 (6%)

Query: 592 GITDAFSYINS-SVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTD-----EKSYCM 645
           G+ +A   I     + + +++TG    F  G   +G     +      D     E +Y  
Sbjct: 35  GLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAALETAY-H 93

Query: 646 PLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
           P   ++     P++ A+ G A G G +  L  D  + +  + +   + R G  P  GST 
Sbjct: 94  PFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTW 153

Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKEL 760
           + P+  GK  + E+     +   +   + G+   V+   +++  ++KLA +L+      L
Sbjct: 154 LLPRLVGKARAMELSLLGEKLPAETALQWGLVNRVVDDAELMAEAMKLAHELANGPTVAL 213

Query: 761 ELQKKYYSHSLQ 772
            L +K Y  S +
Sbjct: 214 GLIRKLYWDSPE 225

Length = 266

>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional

 Score = 54.7 bits (132), Expect = 6e-08
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 17/164 (10%)

Query: 607 KVIIITGYENYFACGGTKEGLLKIQ-KGISRFTDEKSYCM---PLY---------CKIPV 653
           +VI++TG    F  G     L  I      R TD + +     P Y          + PV
Sbjct: 52  RVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPV 111

Query: 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSRE 713
           IAA+ G   G G    L CD    ++ + + + + R G     G + I P+  G   + +
Sbjct: 112 IAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALD 171

Query: 714 ILFTASEFKGKELKERGISMPVLP----RKQVLFYSLKLAKKLS 753
           +L +A  F  +E    G+   V+P     ++ L Y+  LA+ +S
Sbjct: 172 LLLSARTFYAEEALRLGLVNRVVPPDELMERTLAYAEDLARNVS 215

Length = 272

>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase)

 Score = 54.1 bits (130), Expect = 8e-08
 Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 7/169 (4%)

Query: 590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGL-----LKIQKGISRFTDEKSYC 644
           VK I  A           V+I+TG  +   C G  + +          G+ R        
Sbjct: 32  VKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYIDDSGVHRLNVLDVQR 91

Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFP 703
               C  PVIA + G+AIG G  + + CD TI +E + +     + G F  G GS+ +  
Sbjct: 92  QIRTCPKPVIAMVNGYAIGGGHVLHMMCDLTIAAENARFGQTGPKVGSFDGGYGSSYMAR 151

Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
              G+  +REI F   ++  K+  + G+   V+P   +   +++  +++
Sbjct: 152 I-VGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREI 199

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259

>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase

 Score = 53.8 bits (129), Expect = 1e-07
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFPQRFGKIL 710
           PVIA +QG+AIG G  +   CD TI SE++ +     + G   PG G+ L+  +  G+  
Sbjct: 96  PVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALL-ARVVGEKK 154

Query: 711 SREILFTASEFKGKELKERGISMPVLPRKQV 741
           +REI +    +  +E    G+   V+P  Q+
Sbjct: 155 AREIWYLCRRYTAQEALAMGLVNAVVPHDQL 185

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256

>gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
             +PVIAA+ G AIGAG  + + CD  + + E+ +Q P  +YG 
Sbjct: 85  APVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGI 128

Length = 243

>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional

 Score = 51.3 bits (123), Expect = 6e-07
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVIAA+ G A G G  +       I SE +++  P +R G  P  G T   P+  G+  +
Sbjct: 102 PVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRA 161

Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
            E+L T   F  +   E G+   V+P +++L  +  LA+++
Sbjct: 162 LELLLTGDAFSAERALEIGLVNAVVPHEELLPAARALARRI 202

Length = 260

>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional

 Score = 51.0 bits (122), Expect = 1e-06
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA-GSTLIFPQRFGKIL 710
           PVIAA+ G AIG G  + L  D  + S  + +++  +  G T    G + + P+  G   
Sbjct: 111 PVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSR 170

Query: 711 SREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKK 765
           + EI+ T  +   +E +  G+    +P +Q+L     +A +++  S+  +EL K+
Sbjct: 171 AFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTCYAIAARMAGFSRPGIELTKR 225

Length = 276

>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 16/169 (9%)

Query: 592 GITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKI 651
            + DA+  +++    +  I+TG    F  G   +   K   G   F D  SY      +I
Sbjct: 36  IMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPG-DSFKD-GSYDPS---RI 90

Query: 652 -----------PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
                      P+IAA++G AI  G  +    D  +  E + +     ++   P  GS +
Sbjct: 91  DALLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAV 150

Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLA 749
              ++    ++ ++L T       E KE G+   V+P  Q L  +L+LA
Sbjct: 151 RLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHVVPDGQALDKALELA 199

Length = 263

>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 27/122 (22%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA---GSTL----- 700
            ++P IAA+ G  +G G A+   CD  I +  +       R+GF P A   G+ L     
Sbjct: 101 LRVPTIAAIAGACVGGGAAIAAACDLRIATPSA-------RFGF-PIARTLGNCLSMSNL 152

Query: 701 ------IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSL 754
                 +   R      +++LFTA   + +E    G+   V+    +   +  LA+ L+ 
Sbjct: 153 ARLVALLGAAR-----VKDMLFTARLLEAEEALAAGLVNEVVEDAALDARADALAELLAA 207

Query: 755 LS 756
            +
Sbjct: 208 HA 209

Length = 262

>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 32/155 (20%), Positives = 71/155 (45%), Gaps = 13/155 (8%)

Query: 607 KVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM---------PLYCKIPVIAAM 657
           +V++I G    F+ GG    L  +++    F + ++             + C  P+++A+
Sbjct: 58  RVVLIRGEGKAFSAGGD---LALVEEMADDF-EVRARVWREARDLVYNVINCDKPIVSAI 113

Query: 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFT 717
            G A+GAG    L  D +I ++++     + R G   G  + +++P   G   ++  L  
Sbjct: 114 HGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLL 173

Query: 718 ASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
                G+E +  G+    +   ++L  +L++A++L
Sbjct: 174 CEPVSGEEAERIGLVSLAVDDDELLPKALEVAERL 208

Length = 268

>gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ

 Score = 51.0 bits (122), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
           IPV+AA+ G  +G G  + L C   + S++  +V   P ++ G  PG+G T   P+  G 
Sbjct: 97  IPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGV 156

Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKK 765
             + +++ T  + + K+  + G+   V+P+  +L  ++++A K     +K L LQ++
Sbjct: 157 STALDMILTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALK-GKPIRKPLSLQER 212

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog model [Fatty acid and phospholipid metabolism, Degradation]. Length = 699

>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB

 Score = 49.5 bits (118), Expect = 3e-06
 Identities = 28/126 (22%), Positives = 53/126 (42%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PV+ A+ G A GAG  + L CD  + +E + +   + + G  P +G T   P+  G+  +
Sbjct: 95  PVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARA 154

Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSL 771
             +     +   +     G+   V+    ++  +  LA  L+    + L L K+    + 
Sbjct: 155 MGLAMLGEKLDARTAASWGLIWQVVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAA 214

Query: 772 QKKLST 777
              L T
Sbjct: 215 TNSLDT 220

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256

>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase

 Score = 49.4 bits (118), Expect = 3e-06
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 596 AFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKS---YCMPLYCKIP 652
           AF  ++     KVII+TG    F  G       ++ KG  +  D ++     M   C+ P
Sbjct: 45  AFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFKGDVK--DVETDPVAQMER-CRKP 101

Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR 712
           +I A+ G AI AG+ + L CD  + S  + +   + ++G  P  G +    +  G   +R
Sbjct: 102 IIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAR 161

Query: 713 EILFTA 718
           E+  TA
Sbjct: 162 EVSLTA 167

Length = 265

>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional

 Score = 47.2 bits (113), Expect = 1e-05
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 21/158 (13%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           N TV+  +T AF  +++    + +++ G    F C G     L   K ++ ++D+++   
Sbjct: 29  NETVIAELTAAFRALDADDSVRAVVLAGAGKAF-CAGAD---LNWMKKMAGYSDDENRAD 84

Query: 646 PLY----------CKIPVIAAMQGHAIGAGWAMGLF--CDYTIFSEESVYQSPYMRYGFT 693
                        C  PVIA + G A   G  MGL   CD  + ++ +V+    +R G  
Sbjct: 85  ARRLADMLRAIYRCPKPVIARVHGDAYAGG--MGLVAACDIAVAADHAVFCLSEVRLGLI 142

Query: 694 PGAGSTLIFPQR-FGKILSREILFTASEFKGKELKERG 730
           P   S  +   R  G+  +R    TA  F   E    G
Sbjct: 143 PATISPYV--IRAMGERAARRYFLTAERFDAAEALRLG 178

Length = 262

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score = 47.3 bits (113), Expect = 2e-05
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 24/101 (23%)

Query: 230 GVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLV 289
            V +GC +        +     A A      + LP  V        P + ++ AC+S L 
Sbjct: 53  DVILGCVLQAGE-QGQNIARQAALA------AGLPGSV--------PAVTVNRACASGLA 97

Query: 290 AIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS 330
           A+  A  ++  G + + LAGGV          KMS + M  
Sbjct: 98  AVRLAAQAIASGEADVVLAGGVE---------KMSDAPMGR 129

Length = 392

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 47.1 bits (113), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 276 PCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGV 311
           P   ++  C S L A+A A  S+  G + + +AGGV
Sbjct: 76  PATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGV 111

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase

 Score = 46.7 bits (111), Expect = 3e-05
 Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 40/195 (20%)

Query: 570 LIYAKLICNYISK------DLKNS---TVVKGITDAFSYINSSVQYKVIIITGY-ENYFA 619
           +IY K +   I+K      + +N+     VK +  AF+         VII+TG     F 
Sbjct: 67  IIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFC 126

Query: 620 CGG-----TKEG-----------LLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIG 663
            GG      K+G           +L +Q  I R               PVIA + G+A+G
Sbjct: 127 SGGDQAVRGKDGYVGPDDAGRLNVLDLQIQIRR------------LPKPVIAMVAGYAVG 174

Query: 664 AGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFPQRFGKILSREILFTASEFK 722
            G  + + CD TI ++ +V+     + G F  G GS+ I  +  G+  +RE+ F A  + 
Sbjct: 175 GGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSS-IMARLVGQKKAREMWFLARFYT 233

Query: 723 GKELKERGISMPVLP 737
             E  + G+   V+P
Sbjct: 234 ASEALKMGLVNTVVP 248

Length = 327

>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional

 Score = 46.0 bits (110), Expect = 3e-05
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEE---SVYQSPYMRYGFTPGAGSTLIFPQRFG 707
           +PVIAA++G   G G  + L  D  I + +   S+ +    ++G  P    T+       
Sbjct: 103 VPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIME---AKWGLVPDMAGTVSLRGLVR 159

Query: 708 KILSREILFTASEFKGKELKERG 730
           K ++RE+ +TA  F  +E  E G
Sbjct: 160 KDVARELTYTARVFSAEEALELG 182

Length = 262

>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional

 Score = 45.4 bits (108), Expect = 5e-05
 Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 19/176 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE-KSYC 644
           N  ++  +  AF+ +   V  + +++ G  ++F C G     L + +   R   E   + 
Sbjct: 27  NDGLIAALRAAFARLPEGV--RAVVLHGEGDHF-CAG-----LDLSELRERDAGEGMHHS 78

Query: 645 MPL--------YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPG 695
                      Y ++PVIAA+ G  +G G  +       +  E + +  P  + G F  G
Sbjct: 79  RRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGG 138

Query: 696 AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
            GS  + P+  G     +++ T   +  +E +  G++  ++P  + L  +++LA++
Sbjct: 139 GGSVRV-PRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEALDKAMELARR 193

Length = 255

>gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

 Score = 45.5 bits (108), Expect = 5e-05
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 590 VKGITDAFSYINSSVQYKVIIITGY---ENYFACGGTKEGLLKIQKGISRFTDEKS---- 642
           V  + DAF+         VI++TG    +  F  GG +    K++     + D+      
Sbjct: 48  VDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQ----KVRGDSGGYVDDDGIPRL 103

Query: 643 YCMPL-----YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGA 696
             + L         PVIA + G+AIG G  + + CD TI ++ +++     + G F  G 
Sbjct: 104 NVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGY 163

Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
           GS+ +     G+  +REI F   ++  +E  + G+   V+P
Sbjct: 164 GSSYLARI-VGQKKAREIWFLCRQYDAEEALDMGLVNTVVP 203

Length = 282

>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

 Score = 45.7 bits (108), Expect = 6e-05
 Identities = 29/94 (30%), Positives = 41/94 (43%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
           C+ PVIAA+ G  IG G  +   CD    SE++ +    +    T   G+    P   G 
Sbjct: 110 CRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGY 169

Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
             + E+  T   F G E KE G+   V   K+ L
Sbjct: 170 GNAMELALTGRRFSGSEAKELGLVSRVFGSKEDL 203

Length = 275

>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional

 Score = 45.4 bits (108), Expect = 6e-05
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
              PVIAA+ G A+G G  M L  D  + S  + +   + R G  P A S+   P+  G 
Sbjct: 112 SLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVG- 170

Query: 709 ILSR--EILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
            L    E +++   F  +E  + G+   V P  ++L  +  LA+++
Sbjct: 171 -LQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLPAARALAREI 215

Length = 296

>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional

 Score = 44.6 bits (106), Expect = 1e-04
 Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 24/177 (13%)

Query: 652 PVIAAMQGHAIGAG----WAMGLFCDYTIFSEESVYQSPYMRYGFTPGA---GSTLIFPQ 704
           P IA +QG  I  G    W     CD  + S+++ +  P +R G  PG            
Sbjct: 120 PTIAQVQGACIAGGLMLAWV----CDLIVASDDAFFSDPVVRMG-IPGVEYFAHPWELGP 174

Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQK 764
           R  K    E+LFT       E    G+   V+PR ++   +L+LA++++ +    L L K
Sbjct: 175 RKAK----ELLFTGDRLTADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTK 230

Query: 765 KYYSHSL--QKKLSTI---F-LHELT-MHDYTFVNNPSVITNIERYFDKSIKKNNSK 814
           +  + +L  Q   + +   F LH+L   H+     +     +  R    + K   +K
Sbjct: 231 RAVNQTLDAQGFRAALDAVFDLHQLGHAHNAEVGGDRLGGAD-ARGMADARKAAAAK 286

Length = 288

>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 25/144 (17%)

Query: 600 INSSVQYKVIIITGYENYFACGGT------------KEGLLKIQKGISRFTDEKSYCMPL 647
           IN+  + +V+I+TG    F  G              +E    I + I RF+D        
Sbjct: 39  INADPKIRVVIVTGEGRAFCVGADLSEFAPDFAIDLRETFYPIIREI-RFSD-------- 89

Query: 648 YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG 707
             KI  I+A+ G   GA   + L  D+   S +  + + + R G     G       +  
Sbjct: 90  --KI-YISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFL-LKLT 145

Query: 708 KILSREILFTASEFKGKELKERGI 731
                EIL    EF  +E +  G+
Sbjct: 146 GQRFYEILVLGGEFTAEEAERWGL 169

Length = 248

>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

 Score = 44.2 bits (105), Expect = 2e-04
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 249 MYNAYALMGESVSILPARVSYFLNLQG-PCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           +    A  G   S   A ++ +L L G P   ++ A +S   A+  A  ++  G + + L
Sbjct: 41  VVVGNAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVL 100

Query: 308 AGGV 311
             G 
Sbjct: 101 VVGA 104

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375

>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 23/80 (28%), Positives = 36/80 (45%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           P IA ++G+ IG G  + L CD  I +E+S +  P  R G   G           G   +
Sbjct: 108 PTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAA 167

Query: 712 REILFTASEFKGKELKERGI 731
           +++ +TA  F   E    G+
Sbjct: 168 KDLFYTARRFDAAEALRIGL 187

Length = 269

>gnl|CDD|236338 PRK08788, PRK08788, enoyl-CoA hydratase; Validated

 Score = 43.0 bits (102), Expect = 4e-04
 Identities = 20/78 (25%), Positives = 36/78 (46%)

Query: 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSRE 713
           IA +QG A+G G+   L     I    +    P + +   PG G+     +R G  L+ E
Sbjct: 125 IALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEE 184

Query: 714 ILFTASEFKGKELKERGI 731
           ++ +   +  +EL + G+
Sbjct: 185 LILSGKLYTAEELHDMGL 202

Length = 287

>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 650 KIPVIAAMQGHAIGAGWAMGLF--CDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG 707
           KIP +A +QG A G   A+GL   CD  I ++++ +    +R G  P   S  +  +  G
Sbjct: 101 KIPTLAVVQGAAFGG--ALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPFVV-KAIG 157

Query: 708 KILSREILFTASEFKGKELKERGISMPVLP 737
           +  +R    TA  F G+  +E G+     P
Sbjct: 158 ERAARRYALTAERFDGRRARELGLLAESYP 187

Length = 265

>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional

 Score = 42.3 bits (100), Expect = 5e-04
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLF--CDYTIFSEESVYQSPYMRYGFTPGAGSTL--IFPQ 704
           C +PVIAA+ G  +G G  +GL    D  + S+++ +  P +  G   GA + L  + PQ
Sbjct: 93  CAVPVIAAVHGFCLGGG--IGLVGNADVIVASDDATFGLPEVDRG-ALGAATHLQRLVPQ 149

Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
                L R + FTA+     EL   G    V+PR Q+   +L++A+K+
Sbjct: 150 H----LMRALFFTAATITAAELHHFGSVEEVVPRDQLDEAALEVARKI 193

Length = 249

>gnl|CDD|221957 pfam13175, AAA_15, AAA ATPase domain

 Score = 42.4 bits (100), Expect = 6e-04
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 2/119 (1%)

Query: 2   KSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI-SYDNSKKLKSKNLSINN 60
            S ++KS ++    + + + INND  D+      SK +   +    +  +   +      
Sbjct: 83  SSNEIKSFSIKFYLNYYLEIINNDVEDEIELLLFSKNLEYILKKILDKIEKFDEIKGAKK 142

Query: 61  DDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIAI 119
            DF KSIN  +ID  I K  SKI++D I +      K+ +  ++N   +K  N  +  I
Sbjct: 143 KDFFKSINIYEIDNFIDKTLSKILDDNIVFQ-DNLEKNIDDKLSNIFNEKLSNLKNEKI 200

This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Length = 320

>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional

 Score = 42.0 bits (99), Expect = 0.001
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 276 PCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGV-YIINTP---DIHIKMSKSGMLSP 331
           P +A+D  C+SSL  ++     +  G + I +AGGV ++  TP   + HI+ +   +  P
Sbjct: 87  PAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDP 146

Query: 332 DGHCYSFDQRANGFVPG 348
               Y       G+V G
Sbjct: 147 K---YIEYDLTTGYVMG 160

Length = 394

>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional

 Score = 41.4 bits (98), Expect = 0.001
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG 707
           +PVIAA+ G A GAG  + L CD  + +  + +   +++ G  P +G T   P+  G
Sbjct: 100 LPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVG 156

Length = 262

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 276 PCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGV 311
           P + I+  C S L A+A A  ++  G++ I +AGGV
Sbjct: 78  PAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGV 113

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex subunit alpha; Reviewed

 Score = 41.4 bits (98), Expect = 0.002
 Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQ--SPYMRYGFTPGAGSTLIFPQRF 706
             IPV+AA+ G  +G G  + L C Y + +++       P ++ G  PG+G T   P+  
Sbjct: 100 LPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLI 159

Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKK 765
           G   + +++ T  + + K+  + G+   V+P   +L  +++LAKK    +++ L ++++
Sbjct: 160 GVSTALDMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGK-PARRPLPVRER 217

Length = 708

>gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional

 Score = 40.3 bits (95), Expect = 0.002
 Identities = 27/102 (26%), Positives = 53/102 (51%)

Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           P++ A+QG+ +  G  + L  D  + ++ + +    ++ G  P  G+TL FPQ  G   +
Sbjct: 94  PLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNA 153

Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
              L T  EF  +E    G+   V+P  + L  +++LA++++
Sbjct: 154 MRYLLTGDEFDAQEALRLGLVQEVVPPGEQLERAIELAERIA 195

Length = 255

>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional

 Score = 40.4 bits (95), Expect = 0.002
 Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 9/159 (5%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ---KGISRFTDEKS 642
           ++ ++  +T A   + +    +V+++TG    F C G   G ++ Q      +R  + + 
Sbjct: 30  SARMIAELTTAARRLAADAAVRVVVLTGAGKSF-CAGGDLGWMRAQMTADRATRIEEARR 88

Query: 643 YCMPLY----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGS 698
             M L        P+I  +QG A G G  +   CD  I    + +     R G  P   S
Sbjct: 89  LAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATIS 148

Query: 699 TLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
             +   R G+  +R +  +A  F  +E    G+   V+P
Sbjct: 149 PYVV-ARMGEANARRVFMSARLFDAEEAVRLGLLSRVVP 186

Length = 262

>gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional

 Score = 40.4 bits (95), Expect = 0.002
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 12/124 (9%)

Query: 576 ICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGT--KEGLLKIQKG 633
           I N  S ++  + V+  +T A  ++ +    +V+++ G       GG   KE     Q  
Sbjct: 22  IRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQAS 81

Query: 634 ----ISRFTD--EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPY 687
               ISR  D  +     P    +PVIA + G  +G G  +   CD  I + ++ +  P 
Sbjct: 82  AEAFISRLRDLCDAVRHFP----VPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPE 137

Query: 688 MRYG 691
           +R G
Sbjct: 138 VRVG 141

Length = 256

>gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA hydratase

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFPQRFGKI 709
           +P++ A++G  +G G  +    +    + ++    P +  G F P A   L  P+R G++
Sbjct: 90  VPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPAASCLL--PERMGRV 147

Query: 710 LSREILFTASEFKGKELKERGI 731
            + ++L++     G E    G+
Sbjct: 148 AAEDLLYSGRSIDGAEGARIGL 169

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. Length = 251

>gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated

 Score = 40.0 bits (94), Expect = 0.003
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 27/119 (22%)

Query: 627 LLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSP 686
           +L++Q+ I RF       MP   K  VIA + G A G G ++ + CD T+ S E      
Sbjct: 124 ILEVQRLI-RF-------MP---K-VVIAVVPGWAAGGGHSLHVVCDLTLASRE------ 165

Query: 687 YMRY--------GFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
           + R+         F  G GS     ++ G+  +REI F    +  +E  + G    V+P
Sbjct: 166 HARFKQTDADVGSFDGGYGSAY-LARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVP 223

Length = 302

>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial

 Score = 40.6 bits (95), Expect = 0.003
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 10/116 (8%)

Query: 619 ACGGTKEGLLKIQKGISRFTD-EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIF 677
           AC   +E     Q+G   F   EKS       + P++AA+ G  +G G  + L C Y I 
Sbjct: 83  ACKTAQEVTQLSQEGQEMFERIEKS-------QKPIVAAISGSCLGGGLELALACHYRIA 135

Query: 678 SEES--VYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
           +++   +   P +  G  PGAG T   P+  G   + +++ T  + +    K+ GI
Sbjct: 136 TKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGI 191

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737

>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional

 Score = 40.0 bits (94), Expect = 0.004
 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 45/192 (23%)

Query: 608 VIIITG--------------YENYFACGGTKEGLLKIQ----------------KGISRF 637
           VI+++G               E   + GG      K Q                + +SRF
Sbjct: 57  VILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRF 116

Query: 638 TDEKSYCM-PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP-- 694
                  M   +   P +A + G+ +  G  + L CD  I ++++       + G+ P  
Sbjct: 117 VRG---FMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDA-------KIGYPPTR 166

Query: 695 --GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
             G  +T ++  R G   ++ +LFT     G +  E G+++  +P +++   + +L +++
Sbjct: 167 VWGVPATGMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERLVERI 226

Query: 753 SLLSKKELELQK 764
           + +   +L + K
Sbjct: 227 AAVPVNQLAMVK 238

Length = 302

>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB

 Score = 40.2 bits (94), Expect = 0.004
 Identities = 20/75 (26%), Positives = 36/75 (48%)

Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKIL 710
           +P +AA+ G A+G G    L  D+ I  + +    P  + G  PG G T+  P+  G   
Sbjct: 103 VPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADN 162

Query: 711 SREILFTASEFKGKE 725
           + E + +  E + ++
Sbjct: 163 ALEWIASGKENRAED 177

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	829
COG3321	1061	Polyketide synthase modules and related proteins [	100.0
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	100.0
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
KOG1394|consensus	440		100.0
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	100.0
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	100.0
cd00832	399	CLF Chain-length factor (CLF) is a factor required	100.0
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	100.0
KOG1202|consensus	2376		100.0
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	100.0
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	100.0
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	100.0
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	100.0
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	100.0
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	100.0
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	100.0
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	100.0
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
KOG1680|consensus	290		100.0
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	100.0
PLN02888	265	enoyl-CoA hydratase	100.0
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	100.0
PLN03214	278	probable enoyl-CoA hydratase/isomerase; Provisiona	100.0
PRK05862	257	enoyl-CoA hydratase; Provisional	100.0
PRK08259	254	enoyl-CoA hydratase; Provisional	100.0
PRK05980	260	enoyl-CoA hydratase; Provisional	100.0
PRK08252	254	enoyl-CoA hydratase; Provisional	100.0
PLN02600	251	enoyl-CoA hydratase	100.0
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	100.0
PRK06563	255	enoyl-CoA hydratase; Provisional	100.0
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	100.0
PRK08150	255	enoyl-CoA hydratase; Provisional	100.0
PRK06143	256	enoyl-CoA hydratase; Provisional	100.0
PRK07799	263	enoyl-CoA hydratase; Provisional	100.0
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	100.0
PRK06494	259	enoyl-CoA hydratase; Provisional	100.0
PRK09076	258	enoyl-CoA hydratase; Provisional	100.0
PRK08138	261	enoyl-CoA hydratase; Provisional	100.0
PRK06142	272	enoyl-CoA hydratase; Provisional	100.0
PRK09120	275	p-hydroxycinnamoyl CoA hydratase/lyase; Validated	100.0
PRK07658	257	enoyl-CoA hydratase; Provisional	100.0
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	100.0
PRK07260	255	enoyl-CoA hydratase; Provisional	100.0
PRK09245	266	enoyl-CoA hydratase; Provisional	100.0
PRK08139	266	enoyl-CoA hydratase; Validated	100.0
PRK06127	269	enoyl-CoA hydratase; Provisional	100.0
PRK07657	260	enoyl-CoA hydratase; Provisional	100.0
PRK08140	262	enoyl-CoA hydratase; Provisional	100.0
PRK06023	251	enoyl-CoA hydratase; Provisional	100.0
PRK08258	277	enoyl-CoA hydratase; Provisional	100.0
PRK05995	262	enoyl-CoA hydratase; Provisional	100.0
PRK05674	265	gamma-carboxygeranoyl-CoA hydratase; Validated	100.0
PRK03580	261	carnitinyl-CoA dehydratase; Provisional	100.0
TIGR01929	259	menB naphthoate synthase (dihydroxynaphthoic acid	100.0
PRK07511	260	enoyl-CoA hydratase; Provisional	100.0
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	100.0
PRK07468	262	enoyl-CoA hydratase; Provisional	100.0
PRK05981	266	enoyl-CoA hydratase; Provisional	100.0
PRK06688	259	enoyl-CoA hydratase; Provisional	100.0
PRK05870	249	enoyl-CoA hydratase; Provisional	100.0
PRK06210	272	enoyl-CoA hydratase; Provisional	100.0
PRK07396	273	dihydroxynaphthoic acid synthetase; Validated	100.0
PRK07938	249	enoyl-CoA hydratase; Provisional	100.0
PRK05864	276	enoyl-CoA hydratase; Provisional	100.0
TIGR03210	256	badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb	100.0
PRK07327	268	enoyl-CoA hydratase; Provisional	100.0
PRK07659	260	enoyl-CoA hydratase; Provisional	100.0
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	100.0
PF00378	245	ECH: Enoyl-CoA hydratase/isomerase family; InterPr	100.0
TIGR03189	251	dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy	100.0
PRK06144	262	enoyl-CoA hydratase; Provisional	100.0
PRK06495	257	enoyl-CoA hydratase; Provisional	100.0
PRK08260	296	enoyl-CoA hydratase; Provisional	100.0
PLN02921	327	naphthoate synthase	100.0
PRK06072	248	enoyl-CoA hydratase; Provisional	100.0
PRK11423	261	methylmalonyl-CoA decarboxylase; Provisional	100.0
PRK07509	262	enoyl-CoA hydratase; Provisional	100.0
PRK06190	258	enoyl-CoA hydratase; Provisional	100.0
COG1024	257	CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi	100.0
PRK08321	302	naphthoate synthase; Validated	100.0
PRK07854	243	enoyl-CoA hydratase; Provisional	100.0
PRK07827	260	enoyl-CoA hydratase; Provisional	100.0
PRK12478	298	enoyl-CoA hydratase; Provisional	100.0
PRK05617	342	3-hydroxyisobutyryl-CoA hydrolase; Provisional	100.0
PRK07112	255	polyketide biosynthesis enoyl-CoA hydratase; Valid	100.0
KOG0016|consensus	266		100.0
PRK08788	287	enoyl-CoA hydratase; Validated	100.0
PRK05869	222	enoyl-CoA hydratase; Validated	100.0
PLN02874	379	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	100.0
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	100.0
PRK08290	288	enoyl-CoA hydratase; Provisional	100.0
KOG1679|consensus	291		100.0
PRK08272	302	enoyl-CoA hydratase; Provisional	100.0
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
TIGR03200	360	dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy	100.0
PRK06213	229	enoyl-CoA hydratase; Provisional	100.0
PRK11730	715	fadB multifunctional fatty acid oxidation complex	100.0
KOG1681|consensus	292		99.97
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	99.97
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	99.97
COG0447	282	MenB Dihydroxynaphthoic acid synthase [Coenzyme me	99.97
PLN02988	381	3-hydroxyisobutyryl-CoA hydrolase	99.97
PLN02267	239	enoyl-CoA hydratase/isomerase family protein	99.97
PLN02851	407	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.97
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.97
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	99.96
KOG1682|consensus	287		99.96
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	99.96
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.95
cd06558	195	crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy	99.94
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.94
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.92
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.91
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.91
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.91
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.91
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.9
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	99.9
PRK09051	394	beta-ketothiolase; Provisional	99.9
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.9
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.89
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.89
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.89
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.89
KOG1684|consensus	401		99.89
PLN02287	452	3-ketoacyl-CoA thiolase	99.88
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.88
PLN02644	394	acetyl-CoA C-acetyltransferase	99.88
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.88
PRK05790	393	putative acyltransferase; Provisional	99.88
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.88
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.88
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.88
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.87
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.87
PRK08256	391	lipid-transfer protein; Provisional	99.87
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.87
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.87
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.86
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.86
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.86
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.86
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	99.86
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.86
PRK06059	399	lipid-transfer protein; Provisional	99.86
PRK06158	384	thiolase; Provisional	99.86
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	99.86
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.85
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.85
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.85
PRK06157	398	acetyl-CoA acetyltransferase; Validated	99.85
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.84
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.84
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.84
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.84
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.84
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.83
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	99.83
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	99.82
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.81
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	99.8
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.8
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.79
KOG1390|consensus	396		99.79
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.75
KOG1406|consensus	408		99.75
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.73
PRK07855	386	lipid-transfer protein; Provisional	99.73
PRK08257	498	acetyl-CoA acetyltransferase; Validated	99.73
PRK07937	352	lipid-transfer protein; Provisional	99.72
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.72
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	99.69
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.66
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	99.65
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.65
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.64
KOG1389|consensus	435		99.63
cd07014	177	S49_SppA Signal peptide peptidase A. Signal peptid	99.61
KOG1391|consensus	396		99.61
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	99.59
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	99.57
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	99.53
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	99.53
PRK06840	339	hypothetical protein; Validated	99.53
cd07020	187	Clp_protease_NfeD_1 Nodulation formation efficienc	99.53
PRK04262	347	hypothetical protein; Provisional	99.53
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.47
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	99.46
KOG1392|consensus	465		99.43
PLN03172	393	chalcone synthase family protein; Provisional	99.39
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	99.37
PLN03170	401	chalcone synthase; Provisional	99.33
PLN03171	399	chalcone synthase-like protein; Provisional	99.3
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	99.29
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.28
PLN03169	391	chalcone synthase family protein; Provisional	99.28
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	99.26
PLN03173	391	chalcone synthase; Provisional	99.19
PLN03168	389	chalcone synthase; Provisional	99.14
PRK08304	337	stage V sporulation protein AD; Validated	99.12
cd00394	161	Clp_protease_like Caseinolytic protease (ClpP) is	99.12
PLN02854	521	3-ketoacyl-CoA synthase	99.1
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	99.07
PLN02377	502	3-ketoacyl-CoA synthase	99.04
PLN02577	459	hydroxymethylglutaryl-CoA synthase	99.04
cd07016	160	S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-	99.03
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	99.02
cd07022	214	S49_Sppa_36K_type Signal peptide peptidase A (SppA	99.0
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	98.96
cd07023	208	S49_Sppa_N_C Signal peptide peptidase A (SppA), a	98.9
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	98.88
PRK12404	334	stage V sporulation protein AD; Provisional	98.87
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	98.86
TIGR00706	207	SppA_dom signal peptide peptidase SppA, 36K type.	98.83
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	98.82
cd07018	222	S49_SppA_67K_type Signal peptide peptidase A (SppA	98.73
PLN02932	478	3-ketoacyl-CoA synthase	98.67
PLN02192	511	3-ketoacyl-CoA synthase	98.5
cd07021	178	Clp_protease_NfeD_like Nodulation formation effici	98.49
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	98.44
PRK06060	705	acyl-CoA synthetase; Validated	98.39
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	98.15
PLN00415	466	3-ketoacyl-CoA synthase	98.12
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	98.05
PF00550	67	PP-binding: Phosphopantetheine attachment site; In	97.98
cd07013	162	S14_ClpP Caseinolytic protease (ClpP) is an ATP-de	97.92
KOG1683|consensus	380		97.85
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	97.85
cd07015	172	Clp_protease_NfeD Nodulation formation efficiency	97.83
PRK10949	618	protease 4; Provisional	97.7
PRK00277	200	clpP ATP-dependent Clp protease proteolytic subuni	97.69
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	97.59
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	97.57
PRK12319	256	acetyl-CoA carboxylase subunit alpha; Provisional	97.52
PRK00982	78	acpP acyl carrier protein; Provisional	97.52
CHL00198	322	accA acetyl-CoA carboxylase carboxyltransferase al	97.38
PLN03230	431	acetyl-coenzyme A carboxylase carboxyl transferase	97.35
cd07017	171	S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-	97.31
PRK12553	207	ATP-dependent Clp protease proteolytic subunit; Re	97.29
PLN03229	762	acetyl-coenzyme A carboxylase carboxyl transferase	97.24
TIGR00513	316	accA acetyl-CoA carboxylase, carboxyl transferase,	97.17
COG0616	317	SppA Periplasmic serine proteases (ClpP class) [Po	97.1
PRK14512	197	ATP-dependent Clp protease proteolytic subunit; Pr	97.05
PRK05724	319	acetyl-CoA carboxylase carboxyltransferase subunit	96.97
smart00823	86	PKS_PP Phosphopantetheine attachment site. Phospho	96.84
PF00574	182	CLP_protease: Clp protease; InterPro: IPR001907 In	96.82
CHL00028	200	clpP ATP-dependent Clp protease proteolytic subuni	96.79
TIGR00493	191	clpP ATP-dependent Clp protease, proteolytic subun	96.73
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	96.62
CHL00124	82	acpP acyl carrier protein; Validated	96.55
PRK05654	292	acetyl-CoA carboxylase subunit beta; Validated	96.51
PF01343	154	Peptidase_S49: Peptidase family S49 peptidase clas	96.42
PRK11778	330	putative inner membrane peptidase; Provisional	96.26
TIGR03133	274	malonate_beta malonate decarboxylase, beta subunit	96.16
CHL00174	296	accD acetyl-CoA carboxylase beta subunit; Reviewed	96.12
PRK14514	221	ATP-dependent Clp protease proteolytic subunit; Pr	96.05
PRK14513	201	ATP-dependent Clp protease proteolytic subunit; Pr	96.02
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	95.94
PRK07639	86	acyl carrier protein; Provisional	95.94
PRK05883	91	acyl carrier protein; Validated	95.91
PRK12551	196	ATP-dependent Clp protease proteolytic subunit; Re	95.85
TIGR00515	285	accD acetyl-CoA carboxylase, carboxyl transferase,	95.82
TIGR00517	77	acyl_carrier acyl carrier protein. S (Ser) at posi	95.78
COG0825	317	AccA Acetyl-CoA carboxylase alpha subunit [Lipid m	95.76
PRK12449	80	acyl carrier protein; Provisional	95.64
PRK07081	83	acyl carrier protein; Provisional	95.55
PRK09184	89	acyl carrier protein; Provisional	95.53
PF01972	285	SDH_sah: Serine dehydrogenase proteinase; InterPro	95.41
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	95.39
PRK05350	82	acyl carrier protein; Provisional	95.32
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	94.79
TIGR03134	238	malonate_gamma malonate decarboxylase, gamma subun	94.71
COG0236	80	AcpP Acyl carrier protein [Lipid metabolism / Seco	94.55
PRK07189	301	malonate decarboxylase subunit beta; Reviewed	94.38
PRK07117	79	acyl carrier protein; Validated	94.35
PRK10949	618	protease 4; Provisional	94.09
PRK08172	82	putative acyl carrier protein IacP; Validated	93.94
COG0740	200	ClpP Protease subunit of ATP-dependent Clp proteas	93.86
PF13766	118	ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD	93.66
PRK12552	222	ATP-dependent Clp protease-like protein; Reviewed	93.33
PF01039	493	Carboxyl_trans: Carboxyl transferase domain; Inter	92.99
PRK06508	93	acyl carrier protein; Provisional	92.64
PRK05828	84	acyl carrier protein; Validated	92.31
PRK10252	1296	entF enterobactin synthase subunit F; Provisional	91.64
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	90.94
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	90.62
PLN02820	569	3-methylcrotonyl-CoA carboxylase, beta chain	90.22
PTZ00171	148	acyl carrier protein; Provisional	89.5
COG1030	436	NfeD Membrane-bound serine protease (ClpP class) [	89.2
PRK12467	3956	peptide synthase; Provisional	88.09
KOG1748|consensus	131		86.94
COG3433	74	Aryl carrier domain [Secondary metabolites biosynt	86.56
PRK12316	5163	peptide synthase; Provisional	86.44
COG0777	294	AccD Acetyl-CoA carboxylase beta subunit [Lipid me	86.35
PRK12467	3956	peptide synthase; Provisional	85.39
PRK05691	4334	peptide synthase; Validated	84.37
PRK05087	78	D-alanine--poly(phosphoribitol) ligase subunit 2;	83.78
PRK05691	4334	peptide synthase; Validated	81.32
TIGR01688	73	dltC D-alanine--poly(phosphoribitol) ligase, subun	80.67
PRK12316	5163	peptide synthase; Provisional	80.65

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=2e-90  Score=845.72  Aligned_cols=491  Identities=43%  Similarity=0.730  Sum_probs=461.4

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||+||+|+||+++++++||++|.+|+++++++|.+||+.+.||++++...++.+++++||+++++.||+.||||+|+
T Consensus         4 ~~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr   83 (1061)
T COG3321           4 EPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR   83 (1061)
T ss_pred             CcEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence            44999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccC-ccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      |+..|||||||.++.+|+|||||||.+..+.+..||||+|.+..+|..+... .....++...++..+++++||||.|+|
T Consensus        84 EA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l  163 (1061)
T COG3321          84 EAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL  163 (1061)
T ss_pred             HHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999766532 125667788888889999999999999


Q ss_pred             CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396        274 QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV  353 (829)
Q Consensus       274 ~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa  353 (829)
                      +||+++|+++|||+++|+|+||++|++|+||++|+||++...+|.....+++.|+++++++|++||.++|||++|||+++
T Consensus       164 ~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~  243 (1061)
T COG3321         164 SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGV  243 (1061)
T ss_pred             CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA  433 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A  433 (829)
                      +||+++++|+++|++||++|+|+++|+||...+++.|+..+|.+++++||+++|++|++|+|||+|||||++||++|.++
T Consensus       244 vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~a  323 (1061)
T COG3321         244 VVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANA  323 (1061)
T ss_pred             EEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccccc
Q psy11396        434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK  513 (829)
Q Consensus       434 l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  513 (829)
                      |.++|+... ...+|.|||+|+||||+..|+|+++++|++|+|+|++|||++||++|||+++|+.+||+|+++.+||+..
T Consensus       324 L~~v~~~~~-~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~  402 (1061)
T COG3321         324 LGAVYGEGA-PAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTG  402 (1061)
T ss_pred             HHHHhccCC-CCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcCCCCC
Confidence            999999766 6788999999999999999999999999999999999999999999999999999999999999999643


Q ss_pred             ccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCccccccccc
Q psy11396        514 NKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGI  593 (829)
Q Consensus       514 ~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL  593 (829)
                       ..||+|+||||||||+|+|+||||+++..+.     .....|++|++||+++++|.++..++.++++++.... .+.++
T Consensus       403 -~~prrAgvssfG~gGtNaHvIlEe~~~~~~~-----~~~~~p~~l~lSAk~~~~L~~~a~~l~~~l~~~~~~~-~l~di  475 (1061)
T COG3321         403 -GGPRRAGVSSFGFGGTNAHVILEEAPPRAES-----TIPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLL-SLADV  475 (1061)
T ss_pred             -CCCceeeeeccCCCCCceEEEEeecCCcccC-----CCCCCCceeeeecCCHHHHHHHHHHHHHHHHhCcccc-hHHHH
Confidence             3899999999999999999999999972111     1123458999999999999999999999999987765 68899


Q ss_pred             ccchhhhcccccceeeeeeC
Q psy11396        594 TDAFSYINSSVQYKVIIITG  613 (829)
Q Consensus       594 ~~~l~~~~~d~~vr~vVl~g  613 (829)
                      ++++..-+.+-+.|.+++..
T Consensus       476 a~Tl~~gR~~~~~R~~~va~  495 (1061)
T COG3321         476 AYTLQAGRPHFEHRLAVVAN  495 (1061)
T ss_pred             HHHHHhhhhhccceeEEEeC
Confidence            99998877766778888874

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=100.00  E-value=2e-82  Score=817.63  Aligned_cols=470  Identities=34%  Similarity=0.577  Sum_probs=426.9

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      .+++||||||||++|++.++++||++|.+|+++++++|.+||+.+.||++++...++.+++++||+++++ ||+.+|+|+
T Consensus         5 ~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~-FD~~~F~i~   83 (2582)
T TIGR02813         5 KDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVD-FNPMEFGLP   83 (2582)
T ss_pred             CCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccC-CCHhhcCCC
Confidence            4578999999999999999999999999999999999999999999999999999999999999999986 999999999


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------------cc-------------
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------------IT-------------  245 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------------~~-------------  245 (829)
                      |++++.|||+|+|+++++|+||+||||... +++.+||||+|++.+++...              ..             
T Consensus        84 p~ea~~mDpqqrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (2582)
T TIGR02813        84 PNILELTDISQLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLI  162 (2582)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhh
Confidence            999999999999999999999999999754 78899999999876543210              00             


Q ss_pred             -----CccccchhhhccccccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH
Q psy11396        246 -----DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH  320 (829)
Q Consensus       246 -----~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~  320 (829)
                           ....+.+..+++...|++++|||+.|||+||+++|+++|+||+.||++||++|++|+||++||||++...+|..+
T Consensus       163 ~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~  242 (2582)
T TIGR02813       163 KKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMY  242 (2582)
T ss_pred             hhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHH
Confidence                 011234456788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHH
Q psy11396        321 IKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQT  400 (829)
Q Consensus       321 ~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~  400 (829)
                      ..|++.+++++++.|+|||.+++||++|||+|++|||++++|+++|++|||+|+|++.++||+..+++.|+..+|.++|+
T Consensus       243 ~~fs~~~~lS~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~  322 (2582)
T TIGR02813       243 MSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALK  322 (2582)
T ss_pred             HHHHhccCcCCCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396        401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV  480 (829)
Q Consensus       401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~  480 (829)
                      +||++||++|+||+|||+|||||+.||++|.+||.++|+......++++|+|+|++|||+++|||++++++++++|+|++
T Consensus       323 ~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~  402 (2582)
T TIGR02813       323 RAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKV  402 (2582)
T ss_pred             HHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999875545567999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCcCCCCeeecccccccccc-ccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEE
Q psy11396        481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIK-NKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVF  559 (829)
Q Consensus       481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll  559 (829)
                      |||++|+++|||.++++.++|+++++.++|+.. .+.+|+++||||||||+|+|+||++|++....... ......++++
T Consensus       403 iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~~~~~~~-~~~~~~~~~~  481 (2582)
T TIGR02813       403 LPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPKHQRDDQ-YRQRAVAQTL  481 (2582)
T ss_pred             cCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecCcccccccc-ccccCCccee
Confidence            999999999999999999999999999999632 35689999999999999999999999653322111 1122346789


Q ss_pred             eccccchhhHHHHHHHHhhhcccCCc
Q psy11396        560 PLSAKNLSQLLIYAKLICNYISKDLK  585 (829)
Q Consensus       560 ~~Sa~~~~~L~~~~~~~~~~l~~n~~  585 (829)
                      ++||+++++|.+..+.+.+++..+..
T Consensus       482 ~lSA~~~~aL~~~l~~~~~~l~~~~~  507 (2582)
T TIGR02813       482 LFTAANEKALVSSLKDWKNKLSAKAD  507 (2582)
T ss_pred             eecCCCHHHHHHHHHHHHHHHhcccc
Confidence            99999999999999999988876543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.5e-70  Score=613.59  Aligned_cols=399  Identities=24%  Similarity=0.412  Sum_probs=354.4

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      +.++|||||||+++|.|.++++||++|.+|++++++++  +|+...+           ..+.+|.++   +||+.+| ++
T Consensus         2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~--~~~~~~~-----------~~~~~g~i~---~~~~~~~-~~   64 (414)
T PRK08722          2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIE--HFDTTNF-----------STRFAGLVK---DFNCEEY-MS   64 (414)
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecC--ccccccC-----------CCceeEEcC---CCChhHc-CC
Confidence            45799999999999999999999999999999999875  4543332           234455554   4888887 89


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchh
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +++++.||+++++++.++++||+|||+++...+..++||++|++.+++....        ..+..++++.+++..++.++
T Consensus        65 ~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a  144 (414)
T PRK08722         65 KKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIA  144 (414)
T ss_pred             HHHHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHH
Confidence            9999999999999999999999999998877888899999999877653221        23556778888899999999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFD  339 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd  339 (829)
                      ++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|...++..+..|...+.++     ++..|+|||
T Consensus       145 ~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd  224 (414)
T PRK08722        145 GNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWD  224 (414)
T ss_pred             HHHHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCc
Confidence            999999999999999999999999999999999999999999999999999999999999999987     456899999


Q ss_pred             CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      .+++|+++|||++++|||++++|+++|++||++|+|++.++|+.+...+.|.+.++.++|++||+++|++|+||||||+|
T Consensus       225 ~~~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~h  304 (414)
T PRK08722        225 KDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAH  304 (414)
T ss_pred             CCCCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEcc
Confidence            99999999999999999999999999999999999999999988765556667778999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      ||||+.+|.+|..||.++|+...  ...++|+++|+++||+++|||++++++++++|++|+|||++|+++|+|.++++. 
T Consensus       305 gtgt~~~D~~E~~al~~~fg~~~--~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~-  381 (414)
T PRK08722        305 GTSTPAGDVAEIKGIKRALGEAG--SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDL-  381 (414)
T ss_pred             CccCCCCCHHHHHHHHHHhcccC--CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-
Confidence            99999999999999999998532  235899999999999999999999999999999999999999999999987642 


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                         ++.+.++|    ...+++++|||||||+|+|+||+.
T Consensus       382 ---v~~~~~~~----~~~~~~l~nsfGfGG~n~~lvl~~  413 (414)
T PRK08722        382 ---VPHTARKV----ESMEYAICNSFGFGGTNGSLIFKK  413 (414)
T ss_pred             ---CCCccccC----CCCCEEEEecccCCCceEEEEEec
Confidence               44444444    246899999999999999999974

>KOG1394|consensus

Probab=100.00  E-value=3.7e-71  Score=563.98  Aligned_cols=401  Identities=28%  Similarity=0.441  Sum_probs=358.3

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++|||||||+++|+|.++.++|++|.+|+++|+.+...  +...           ..+...|.++.   |+.+-| +++
T Consensus        23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~--d~k~-----------~p~~v~g~Ip~---f~~e~~-~s~   85 (440)
T KOG1394|consen   23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGP--DYKS-----------IPFTVAGKIPR---FSVEDY-VSK   85 (440)
T ss_pred             ceeEEEeccceeecCCCChHHHHHHhhccccCccccccc--cccc-----------Ccchheeeccc---cccccc-cch
Confidence            589999999999999999999999999999999998631  1111           11223444444   666665 899


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCC---CCCCCceEEEEccccccccccc--------cCccccchhhhccccccc
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPF---SLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSI  262 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  262 (829)
                      ...+.|++...+++.++.+||+|||+.+.   ..+..++||.+|++.++...+.        +..+.++|+..+..+.|+
T Consensus        86 ~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM  165 (440)
T KOG1394|consen   86 GDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNM  165 (440)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhccc
Confidence            99999999999999999999999999765   3466889999999998764433        347789999999999999


Q ss_pred             hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCC
Q psy11396        263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYS  337 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~p  337 (829)
                      .+++||..|||+||+.+++++|++|..+|..|++.|+.|++|++|+||+|....|..+..|.+.+.|+.     ...+||
T Consensus       166 ~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRP  245 (440)
T KOG1394|consen  166 AAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRP  245 (440)
T ss_pred             ccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999985     237999


Q ss_pred             CCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        338 FDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       338 fd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                      ||.++|||++|||++++|||++|+|++||++|||++.|++.++|.+|.+.+.|++.+...+|.+||++||+.|+||+||+
T Consensus       246 fD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvN  325 (440)
T KOG1394|consen  246 FDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVN  325 (440)
T ss_pred             CccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396        418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE  497 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~  497 (829)
                      +|+|.|++||.+|.+||.++|++....   .+|+|.|+.+||.+||+|.++.+..+++++++++||++|++.|++.++++
T Consensus       326 AHATST~~GD~aE~~Ai~~vf~~~~~~---~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~  402 (440)
T KOG1394|consen  326 AHATSTPLGDAAEAEAIKRVFGEHNIA---SKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLD  402 (440)
T ss_pred             cccccCcCchHHHHHHHHHHhccCCcc---cccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccc
Confidence            999999999999999999999975432   37999999999999999999999999999999999999999999977765


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                          +++....+|. ...++++++.|||||||+|+.+++..+
T Consensus       403 ----~~~~~~~~~~-~~~~~~valsNSFGFGGtNaSl~fa~~  439 (440)
T KOG1394|consen  403 ----YVPLKASEKK-GGNKVRVALSNSFGFGGTNASLCFAKF  439 (440)
T ss_pred             ----cccccccccc-ccccceEEEecccccCCcchhheeeec
Confidence                3445566673 335789999999999999999998754

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=100.00  E-value=1.9e-69  Score=617.18  Aligned_cols=398  Identities=26%  Similarity=0.393  Sum_probs=349.0

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      +.++|||||||+++|.|.++++||++|.+|++++.+++  ||+...|.           .+..|.++   .|++..| ++
T Consensus       127 ~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~f~~~~~~-----------~~~ag~i~---~f~~~~~-l~  189 (540)
T PLN02787        127 KQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIE--RFDCSQFP-----------TRIAGEIK---SFSTDGW-VA  189 (540)
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccC--ccchhhCC-----------cccccccc---ccChhhc-CC
Confidence            34799999999999999999999999999999999885  55433321           23344444   3666655 89


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCC---CCCCCceEEEEcccccccccc-------ccCccccchhhhccccccc
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPF---SLSGSLCGVFVGCAVSDYNKL-------ITDPKMYNAYALMGESVSI  262 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  262 (829)
                      +++.+.||+++++++.++++||+|||++++   .+++.++||++|++.+++..+       ......++|+.++....+.
T Consensus       190 ~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~  269 (540)
T PLN02787        190 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNM  269 (540)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccH
Confidence            999999999999999999999999999764   567889999999987654321       1223456677777777888


Q ss_pred             hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCC
Q psy11396        263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYS  337 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~p  337 (829)
                      .+++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|....|..+..|...+.++     ++..|+|
T Consensus       270 ~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rP  349 (540)
T PLN02787        270 GSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRP  349 (540)
T ss_pred             HHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCC
Confidence            89999999999999999999999999999999999999999999999999989999989999988887     4568999


Q ss_pred             CCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        338 FDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       338 fd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                      ||.+++||++|||++++|||++++|+++|++|||+|+|++.++|+.+...+.|++.++.++|++||++||++|+|||||+
T Consensus       350 FD~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyIn  429 (540)
T PLN02787        350 WDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYIN  429 (540)
T ss_pred             cccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence            99999999999999999999999999999999999999999999998777888899999999999999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396        418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE  497 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~  497 (829)
                      +|||||+.+|..|.+||.++|+..    ..++|+++|+++||++||+|++++++++++|++|+|||++|+++|+|.++++
T Consensus       430 aHGTGT~~gD~~E~~Ai~~~Fg~~----~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~  505 (540)
T PLN02787        430 AHATSTKAGDLKEYQALMRCFGQN----PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTK  505 (540)
T ss_pred             ccCccCCCCCHHHHHHHHHHhCCC----CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcc
Confidence            999999999999999999999852    3489999999999999999999999999999999999999999999998754


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                         +.+..+.++|     ..+++++|||||||+|+++||+++
T Consensus       506 ---~~v~~~~~~~-----~ir~aL~nSfGFGG~Naslvl~~~  539 (540)
T PLN02787        506 ---VLVGPKKERL-----DIKVALSNSFGFGGHNSSILFAPY  539 (540)
T ss_pred             ---cccccccccC-----CcCEEEEeeecCCceeEEEEEEeC
Confidence               2233333333     468999999999999999999975

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.3e-68  Score=607.48  Aligned_cols=401  Identities=25%  Similarity=0.397  Sum_probs=356.4

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcc-----cccCCc
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDI-----EIFDPL  187 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~fd~~  187 (829)
                      +.++|+|||||+++|.|.++++||++|++|+++++++|..+|..  +           ....+|+++++     +.||+.
T Consensus         2 ~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~--~-----------~~~~~g~i~~~~~~~~~~fd~~   68 (424)
T PRK06333          2 NKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGD--L-----------ATKIGGQVPDLAEDAEAGFDPD   68 (424)
T ss_pred             CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccC--C-----------CCceEEEeccccccccccCChh
Confidence            45799999999999999999999999999999999998766531  1           12344555442     238888


Q ss_pred             CCCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCC-CCCceEEEEccccccccccc--------cCccccchhhhccc
Q psy11396        188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSL-SGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGE  258 (829)
Q Consensus       188 ~f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~  258 (829)
                      +| +++++++.|||+++|++.++++||+|||+++..+ +..++|||+|++.+.+..+.        ..+..+.++.+...
T Consensus        69 ~~-i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (424)
T PRK06333         69 RY-LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSF  147 (424)
T ss_pred             Hc-CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhh
Confidence            88 9999999999999999999999999999998887 77899999999877653322        23445677788888


Q ss_pred             cccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC------C
Q psy11396        259 SVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP------D  332 (829)
Q Consensus       259 ~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~------~  332 (829)
                      ..+.++++|++.||++||+++|+++|+||+.||..|+++|++|+||++||||+|.+.++.....|...+.++.      +
T Consensus       148 ~~~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~  227 (424)
T PRK06333        148 LTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPE  227 (424)
T ss_pred             hhhHHHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCC
Confidence            8899999999999999999999999999999999999999999999999999999889988888888888763      4


Q ss_pred             CCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy11396        333 GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND  412 (829)
Q Consensus       333 ~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~d  412 (829)
                      ..|+|||.+++|+++||||+++|||++++|+++|++||++|+|++.++|+.+.....|++.++.++|++||++||++|+|
T Consensus       228 ~~~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~d  307 (424)
T PRK06333        228 QASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEE  307 (424)
T ss_pred             cCCCCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence            68999999999999999999999999999999999999999999999999876666778889999999999999999999


Q ss_pred             ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396        413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE  492 (829)
Q Consensus       413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~  492 (829)
                      |||||+|||||+.+|..|..+|.++|+.    ..++++++.|+++||++||||++++++++++|++|+|||++|+++|+|
T Consensus       308 Id~i~~hgtgt~~~D~~E~~al~~~fg~----~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~  383 (424)
T PRK06333        308 VQHLNAHATSTPVGDLGEVAAIKKVFGH----VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDP  383 (424)
T ss_pred             CCEEeccCCCCccchHHHHHHHHHHhCC----CCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCC
Confidence            9999999999999999999999999983    345899999999999999999999999999999999999999999999


Q ss_pred             cCC-cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        493 HIK-LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       493 ~~~-~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      .++ ++    ++.++.++|+     .+++++|||||||+|+|+||+++.
T Consensus       384 ~~~~~~----~~~~~~~~~~-----~~~al~~s~gfGG~n~~~il~~~~  423 (424)
T PRK06333        384 AAEGLD----VVANKARPMD-----MDYALSNGFGFGGVNASILFRRWE  423 (424)
T ss_pred             Cccccc----cccCCCcccC-----cCEEEEeeecCCCeeEEEEEeccC
Confidence            886 32    3566777773     578999999999999999999764

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.4e-67  Score=592.70  Aligned_cols=394  Identities=26%  Similarity=0.340  Sum_probs=345.9

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++|||||||+++|.|.+.++||++|.+|+++++++|..+++...           ...+.++++.  +.||+.   +++
T Consensus        11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~-----------~~~~~~g~i~--~~~d~~---~~~   74 (418)
T PRK07910         11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFD-----------LPVRIGGHLL--EEFDHQ---LTR   74 (418)
T ss_pred             CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccC-----------CCcceEEEec--cCcccc---CCH
Confidence            379999999999999999999999999999999998753322111           1123445552  346653   789


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhh
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPA  265 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~  265 (829)
                      ++++.|||++++++.++++||+|||++  ..++.++||++|++.+.+....        ..+..++++.+...+++.++.
T Consensus        75 ~~~~~~d~~~~~~l~aa~~AledAg~~--~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~  152 (418)
T PRK07910         75 VELRRMSYLQRMSTVLGRRVWENAGSP--EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAA  152 (418)
T ss_pred             HHHhhccHHHHHHHHHHHHHHHHcCCC--CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHH
Confidence            999999999999999999999999985  4677899999999876543211        234456677788888999999


Q ss_pred             HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCC-CC-----CCCCCCCCC
Q psy11396        266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGM-LS-----PDGHCYSFD  339 (829)
Q Consensus       266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~-ls-----~~~~~~pfd  339 (829)
                      ++++.++++||+++++++|+|++.||++|+++|++|+||++||||+|..+++..+..|..++. ++     +++.|+|||
T Consensus       153 ~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd  232 (418)
T PRK07910        153 AVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFD  232 (418)
T ss_pred             HHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999998 76     568999999


Q ss_pred             CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      .+++|+++|||++++|||++++|+++|++||++|+|++.++|+.+...+.|.+.++.++|++||+++|++|+||||||+|
T Consensus       233 ~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h  312 (418)
T PRK07910        233 KDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH  312 (418)
T ss_pred             CCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence            99999999999999999999999999999999999999999999888888889999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      ||||+.+|++|.+||.++|+..     .++|+++|+++||++||||++++++++++|++++|||++|+++|||+++++..
T Consensus       313 gtgt~~~D~~E~~Al~~~fg~~-----~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~  387 (418)
T PRK07910        313 ATGTSVGDVAEGKAINNALGGH-----RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVV  387 (418)
T ss_pred             CcCCCCCCHHHHHHHHHHhCCC-----CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccC
Confidence            9999999999999999999842     25799999999999999999999999999999999999999999999986532


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                          +.  .+|   ....+++++|||||||+|+|+||+.+
T Consensus       388 ----~~--~~~---~~~~~~al~nsfGfGG~N~slvl~~~  418 (418)
T PRK07910        388 ----AG--EPR---PGNYRYAINNSFGFGGHNVALAFGRY  418 (418)
T ss_pred             ----CC--CCc---CCCccEEEEeeecCCCeeEEEEEecC
Confidence                22  233   23579999999999999999999863

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=100.00  E-value=8.7e-68  Score=599.40  Aligned_cols=416  Identities=24%  Similarity=0.355  Sum_probs=357.5

Q ss_pred             CCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCC-ccccccCcceeecccccC---cccccCCc
Q psy11396        112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYD-SDKNAIGKTICKKMGSLE---DIEIFDPL  187 (829)
Q Consensus       112 ~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~fd~~  187 (829)
                      ...++|||||||+++|+|.++++||++|.+|+++++++|..||....++. +++...+...++..++++   +++.||+.
T Consensus         3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~   82 (437)
T PLN02836          3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEE   82 (437)
T ss_pred             CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChH
Confidence            35679999999999999999999999999999999999998887665442 333333444556666653   34568888


Q ss_pred             CCCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCC-CCCCceEEEEccccccccccc--------cCccccchhhhccc
Q psy11396        188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGE  258 (829)
Q Consensus       188 ~f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~-i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~  258 (829)
                      +|..    .+++++..++++.++++||+|||+.+.. .+..++||++|++.+.+....        .....++++.+++.
T Consensus        83 ~~~~----~~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~  158 (437)
T PLN02836         83 LWLN----SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRI  158 (437)
T ss_pred             Hhcc----ccccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhh
Confidence            8744    3578999999999999999999997653 467899999998765543221        23456788888899


Q ss_pred             cccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CC
Q psy11396        259 SVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PD  332 (829)
Q Consensus       259 ~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~  332 (829)
                      +.|+++++|++.||++||+++|+++|+||+.||..|+++|++|+||++||||+|...++..+..|...+.++      ++
T Consensus       159 ~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~  238 (437)
T PLN02836        159 LINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPT  238 (437)
T ss_pred             cccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcc
Confidence            999999999999999999999999999999999999999999999999999999988898888888887765      45


Q ss_pred             CCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy11396        333 GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND  412 (829)
Q Consensus       333 ~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~d  412 (829)
                      ..|+|||.+++|+++|||++++||+++++|+++|+++|++|+|++.++|+.+...+.+.+.++.+++++||++||++|+|
T Consensus       239 ~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~d  318 (437)
T PLN02836        239 EASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQ  318 (437)
T ss_pred             cccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhH
Confidence            67999999999999999999999999999999999999999999999998776555666778889999999999999999


Q ss_pred             ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396        413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE  492 (829)
Q Consensus       413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~  492 (829)
                      |||||+|||||+.+|..|.+++.++|+.... .+.++|++.|+++||+++|||++++++++++|++++|||++|+++|+|
T Consensus       319 Id~ve~hgtgt~~~D~~E~~ai~~~~~~~~~-~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p  397 (437)
T PLN02836        319 VDYVNAHATSTPLGDAVEARAIKTVFSEHAT-SGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDP  397 (437)
T ss_pred             cCEEEccCCcCcCcCHHHHHHHHHHhccccc-CCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC
Confidence            9999999999999999999999999986432 346899999999999999999999999999999999999999999999


Q ss_pred             cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      .++++..+.   .   ++  +....+++++|||||||+|+|+||+++|
T Consensus       398 ~~~~~~~~~---~---~~--~~~~~~~~l~nsfgfGG~na~lvl~~~~  437 (437)
T PLN02836        398 IFDDGFVPL---T---AS--KAMLIRAALSNSFGFGGTNASLLFTSPP  437 (437)
T ss_pred             CCCcccCcc---c---CC--CCCCccEEEEecccCCCeeEEEEEecCC
Confidence            998654432   1   11  2235789999999999999999999764

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=100.00  E-value=2.6e-67  Score=588.70  Aligned_cols=387  Identities=22%  Similarity=0.312  Sum_probs=341.8

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|+|.++++||++|.+|++++++++  +|+...|+           .+..+.++   .||+.+ .++++
T Consensus         1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~~-----------~~~~g~i~---~~~~~~-~~~~~   63 (399)
T cd00832           1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPIT--RFDPSGYP-----------ARLAGEVP---DFDAAE-HLPGR   63 (399)
T ss_pred             CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCC--ccccccCC-----------CceeEEeC---CcChhh-cCCHH
Confidence            479999999999999999999999999999999874  56544432           12233333   477765 48999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +.+.||+++++++.++++||+|||+++..+++.++||++|++.+.+...        ...+..++++.++....+.++++
T Consensus        64 ~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  143 (399)
T cd00832          64 LLPQTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQ  143 (399)
T ss_pred             HHhhCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHH
Confidence            9999999999999999999999999988888899999999987765321        12345667777777788889999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC----CCCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP----DGHCYSFDQRA  342 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~----~~~~~pfd~~~  342 (829)
                      |++.||++||+++|+++|+|++.||..|+++|++|+ |++||||+|..++|..+..|...+.++.    ...|+|||.++
T Consensus       144 is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~  222 (399)
T cd00832         144 ISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA  222 (399)
T ss_pred             HHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence            999999999999999999999999999999999999 9999999999999999999999999874    34799999999


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +|+++|||++++|||++++|+++|++||++|.|++.++|+.+..   +...++.++|++||+++|++|+|||||++||||
T Consensus       223 ~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtg  299 (399)
T cd00832         223 AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAG  299 (399)
T ss_pred             CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCc
Confidence            99999999999999999999999999999999999999987642   358899999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                      |+.+|..|.++|.++|+..     .+||++.|+++||+++|+|++++++++++|++++|||++|+++|+|.++++.    
T Consensus       300 t~~~D~~E~~al~~~fg~~-----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~----  370 (399)
T cd00832         300 VPELDRAEAAALAAVFGPR-----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDL----  370 (399)
T ss_pred             CCCCCHHHHHHHHHHhCCC-----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccc----
Confidence            9999999999999999742     4789999999999999999999999999999999999999999999887542    


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEe
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL  536 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl  536 (829)
                      +..+.++     ...+++++|||||||+|+|+||
T Consensus       371 v~~~~~~-----~~~~~al~nsfgfGG~na~lvl  399 (399)
T cd00832         371 VTGRPRP-----AALRTALVLARGRGGFNSALVV  399 (399)
T ss_pred             CCCcccC-----CCCCEEEEeccCCCCcceEEEC
Confidence            3333222     2578999999999999999986

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=100.00  E-value=5.9e-67  Score=595.37  Aligned_cols=422  Identities=50%  Similarity=0.872  Sum_probs=388.1

Q ss_pred             EEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCccccc-CCccccccCcceeecccccCcccccCCcCCCCCHHH
Q psy11396        117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDF-YDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSE  195 (829)
Q Consensus       117 IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~  195 (829)
                      |+|||||+++|.+.++++||++|.+|+++++++|.+||+...+ +++.....++..++.+++++++..||+..|++++++
T Consensus         1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~   80 (424)
T smart00825        1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE   80 (424)
T ss_pred             CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence            7999999999999999999999999999999999888876654 345555566667788888888888999999999999


Q ss_pred             hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhhccCC
Q psy11396        196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYFLNLQ  274 (829)
Q Consensus       196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~  274 (829)
                      .+.|+++++|+++++++||+|||+++.++++.++|||+|+..++|.... ..+..+.++.+.+...+..+++++..+|++
T Consensus        81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~  160 (424)
T smart00825       81 AEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR  160 (424)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999999888775443 234556677777777888999999999999


Q ss_pred             CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEE
Q psy11396        275 GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVL  354 (829)
Q Consensus       275 Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaal  354 (829)
                      ||+++|+++|+|++.||..|+++|++|++|++||||+|....+.....|...+.+++++.++|||.+++|+++|||++++
T Consensus       161 g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal  240 (424)
T smart00825      161 GPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV  240 (424)
T ss_pred             CCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence            99999999999999999999999999999999999999988998888999999999999999999999999999999999


Q ss_pred             EEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHH
Q psy11396        355 MLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL  434 (829)
Q Consensus       355 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al  434 (829)
                      ||++.++|+++|+++|++|.|++.++++.+.....|+...+.+++++||+++|++++|||||++|||||+.+|..|.++|
T Consensus       241 VLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al  320 (424)
T smart00825      241 VLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEAL  320 (424)
T ss_pred             EEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999988777778899999999999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccc
Q psy11396        435 CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN  514 (829)
Q Consensus       435 ~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  514 (829)
                      .++|+.......+++|++.|+++||+.+|||++++++++++|++|+|||++|+++|+|.++++..+++++++.++|+ ..
T Consensus       321 ~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  399 (424)
T smart00825      321 AAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTEATPWP-AT  399 (424)
T ss_pred             HHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCCCcCCC-CC
Confidence            99998654444568999999999999999999999999999999999999999999999999999999999999995 34


Q ss_pred             cCccEEEEeccCCCCceEEEEeeec
Q psy11396        515 KKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       515 ~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      ..++++++|||||||+|+|+||++|
T Consensus       400 ~~~~~~l~~s~gfgg~n~~lvl~~~  424 (424)
T smart00825      400 GRPRRAGVSSFGFGGTNAHVILEEA  424 (424)
T ss_pred             CCccEEEEeccCCCCceEEEEEecC
Confidence            5689999999999999999999986

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>KOG1202|consensus

Probab=100.00  E-value=1.7e-67  Score=592.56  Aligned_cols=450  Identities=35%  Similarity=0.628  Sum_probs=399.4

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      ..++|||.||...+|-..++++||++|.+|.+-+++=| .||.. .+|+         ..++.|-+.+...||..||+..
T Consensus         9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~-rrW~~-G~yg---------LP~r~gKlKdL~kFDa~ff~vh   77 (2376)
T KOG1202|consen    9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDP-RRWEA-GLYG---------LPKRSGKLKDLNKFDAGFFGVH   77 (2376)
T ss_pred             cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCc-ccccc-cccC---------CchhhcchhhhhhhcccccCcC
Confidence            46899999999999999999999999999999888754 57864 3443         2234556677889999999999


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhhc
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYFL  271 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~l  271 (829)
                      |+++..|||+.||.+++.|||+-||||+|.+++++++|||+|.+.+...... .++..+..|...+...+++++||||.|
T Consensus        78 ~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytF  157 (2376)
T KOG1202|consen   78 PKQANTMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTF  157 (2376)
T ss_pred             cccccccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEE
Confidence            9999999999999999999999999999999999999999998877665443 457778889999999999999999999


Q ss_pred             cCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccce
Q psy11396        272 NLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV  351 (829)
Q Consensus       272 gl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGa  351 (829)
                      +++||++.++++|+|++.|+..|++.+++|+||.+||+|+...+.|.....|-++|+++++|.|+.||...+||.++||+
T Consensus       158 DfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~  237 (2376)
T KOG1202|consen  158 DFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGV  237 (2376)
T ss_pred             eccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEccchhhhhCCCceEEEEEEeeeecCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396        352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGK-TNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE  430 (829)
Q Consensus       352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~-~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E  430 (829)
                      ++++|.+.+.|++    +||.|.-..+|.||. ..+.+-|+++.|.+.+++.|..+|++|+++-|||+|||||+.||+.|
T Consensus       238 ~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQE  313 (2376)
T KOG1202|consen  238 VAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQE  313 (2376)
T ss_pred             EEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHH
Confidence            9999999988864    799999999999995 46799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCCCCeeecccccc
Q psy11396        431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LENSPFFINTKCKS  509 (829)
Q Consensus       431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~~~~~v~~~~~~  509 (829)
                      +.+|.+.|..  .+..++.|||+|+|+||++-|||+..++|.+++|++|.|||++||++|||++. +.+..+.|.+++.|
T Consensus       314 aN~it~~fC~--~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp  391 (2376)
T KOG1202|consen  314 ANGITRFFCA--TRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLP  391 (2376)
T ss_pred             hhhHHHHHhh--cCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCC
Confidence            9999999986  34667999999999999999999999999999999999999999999999997 77788999999999


Q ss_pred             ccccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCccccc
Q psy11396        510 WDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTV  589 (829)
Q Consensus       510 ~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~  589 (829)
                      |+     ...+++|||||||+|+|+||+..++..+..  .| ....+.++..|+||+++..++.+.    ...|..+.++
T Consensus       392 ~~-----GGivGiNSFGFGGsN~HviLks~~~~~P~~--tP-~~~~~~l~~~sgRT~eAVeqll~~----~~~n~~D~~~  459 (2376)
T KOG1202|consen  392 WR-----GGIVGINSFGFGGSNAHVILKSNTKPKPAP--TP-HAGLLRLVRASGRTPEAVEQLLEQ----ALRNSDDLEL  459 (2376)
T ss_pred             cc-----CceeeeeccccCCCceeEEeccCCCCCCCC--CC-CCCcceeeecCCCCHHHHHHHHHH----HhcccchHHH
Confidence            93     357999999999999999999987643221  11 112456788999999998776443    3344444443


Q ss_pred             cc
Q psy11396        590 VK  591 (829)
Q Consensus       590 ~~  591 (829)
                      +.
T Consensus       460 l~  461 (2376)
T KOG1202|consen  460 LS  461 (2376)
T ss_pred             HH
Confidence            33

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.3e-66  Score=586.16  Aligned_cols=396  Identities=30%  Similarity=0.465  Sum_probs=348.1

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+|||||+++|.|.++++||++|++|++++++++  +|+...+           .....+.++   .||+..| ++++
T Consensus         2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~--~~~~~~~-----------~~~~~g~i~---~f~~~~~-~~~~   64 (411)
T PRK07314          2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPIT--HFDTSDL-----------AVKIAGEVK---DFNPDDY-MSRK   64 (411)
T ss_pred             CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECC--cccccCC-----------CccEEEEeC---CcChhhc-CCHH
Confidence            689999999999999999999999999999999986  3432221           123344444   4888888 9999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +++.|||+++|+++++++||+|||+++.++++.++||++|++.+.+....        ..+..+.++.+++...+..+++
T Consensus        65 ~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  144 (411)
T PRK07314         65 EARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGH  144 (411)
T ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHH
Confidence            99999999999999999999999999999999999999998766542211        1234566777778888899999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQR  341 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~~  341 (829)
                      +++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|.+.+|.....|...+.++.     +..|+|||.+
T Consensus       145 is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~  224 (411)
T PRK07314        145 VSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD  224 (411)
T ss_pred             HHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC
Confidence            99999999999999999999999999999999999999999999999889988888888887764     5679999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      ++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.+.+.++.+++++||+++|++|+||||||+|||
T Consensus       225 ~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgt  304 (411)
T PRK07314        225 RDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGT  304 (411)
T ss_pred             CCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEcccc
Confidence            99999999999999999999999999999999999999998776556666778899999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                      ||+.+|..|.++|.++|+..   ..+++|++.|+++||+++|||++++++++++|++|+|||++|+++|+|.++++..  
T Consensus       305 gt~~~d~~E~~al~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~--  379 (411)
T PRK07314        305 STPAGDKAETQAIKRVFGEH---AYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYV--  379 (411)
T ss_pred             CCccccHHHHHHHHHHhccc---CCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccc--
Confidence            99999999999999999752   2458999999999999999999999999999999999999999999998875432  


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                        +.+     .....+++++||||||||+|+|+||+.+
T Consensus       380 --~~~-----~~~~~~~~al~~s~gfGG~n~~~vl~~~  410 (411)
T PRK07314        380 --PNE-----ARERKIDYALSNSFGFGGTNASLVFKRY  410 (411)
T ss_pred             --CCc-----ccCCCCCEEEEecccCCCceEEEEEecC
Confidence              222     2234678999999999999999999976

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=5e-66  Score=576.63  Aligned_cols=388  Identities=27%  Similarity=0.401  Sum_probs=333.8

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|.|.+.++||++|++|+++|++++.  |+...+           .++..+.+    .||+..+ ++++
T Consensus         2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~--~~~~~~-----------~~~~~g~~----~~~~~~~-~~~~   63 (406)
T PRK07967          2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPE--FAEMGM-----------RSQVWGNV----KLDPTGL-IDRK   63 (406)
T ss_pred             CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCc--ccccCC-----------CCceEEEc----CCChhhc-CCHH
Confidence            6899999999999999999999999999999998753  322111           12233332    2666555 7788


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc---------cCccccchhhhccccccchhh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI---------TDPKMYNAYALMGESVSILPA  265 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~a~  265 (829)
                      ..+.|++..++++.++.+||+|||+.+..+++.++||++|++.+.+....         ..+..++++.++..+++.+++
T Consensus        64 ~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  143 (406)
T PRK07967         64 VMRFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSA  143 (406)
T ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHH
Confidence            88999999999999999999999998888888999999999766542211         234567788888999999999


Q ss_pred             HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCCC
Q psy11396        266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFD  339 (829)
Q Consensus       266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pfd  339 (829)
                      +|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|.. .+.....|..++.++      ++..|||||
T Consensus       144 ~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~-~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd  222 (406)
T PRK07967        144 CLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL-DWEMSCLFDAMGALSTKYNDTPEKASRAYD  222 (406)
T ss_pred             HHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc-ChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence            9999999999999999999999999999999999999999999999974 445556688888876      456899999


Q ss_pred             CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      .+++|+++|||++++|||++++|++||++||++|.|++.++|+.+  ++.|++.++.++|++||++++  + |||||++|
T Consensus       223 ~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~--~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aH  297 (406)
T PRK07967        223 ANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYD--MVAPSGEGAVRCMQMALATVD--T-PIDYINTH  297 (406)
T ss_pred             CCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCC--CCCCCHHHHHHHHHHHHhCCC--C-CccEEEcC
Confidence            999999999999999999999999999999999999999999986  578899999999999998654  5 99999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      ||||+.+|.+|..||.++|+.     ..++|+++|+++||+++|||+.++++++++|++++|||++|+++++|.+.  ..
T Consensus       298 gtGT~~~D~~E~~Ai~~~fg~-----~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~--~~  370 (406)
T PRK07967        298 GTSTPVGDVKELGAIREVFGD-----KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA--GM  370 (406)
T ss_pred             CCCCCCCCHHHHHHHHHHhCC-----CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCcccc--CC
Confidence            999999999999999999974     23689999999999999999999999999999999999999999999773  11


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      +  +..+..+|    ..++++++|||||||+|+|+||+++
T Consensus       371 ~--~~~~~~~~----~~~~~~l~~sfgfGG~n~~lvl~~~  404 (406)
T PRK07967        371 P--IVTETTDN----AELTTVMSNSFGFGGTNATLVFRRY  404 (406)
T ss_pred             C--ccCCCCcC----CCCCEEEEecccCCCeeEEEEEEec
Confidence            1  22222222    3578999999999999999999986

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=100.00  E-value=1.4e-65  Score=584.09  Aligned_cols=420  Identities=50%  Similarity=0.893  Sum_probs=384.4

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|+|.++++||++|.+|+++++++|..||+...++ ++........+..++++++++.||+.+|+++++
T Consensus         1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~   79 (421)
T cd00833           1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYY-PDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPR   79 (421)
T ss_pred             CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccc-cccccCCCcceecceecCCcccCCHhHcCCCHH
Confidence            4799999999999999999999999999999999998899877776 444455566777888999888899999999999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccC-ccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      +++.|+++++|+++++++||+|||+++.+++..++|+++|+..++|...... ...+.++.+.+...+..++++++.+|+
T Consensus        80 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl  159 (421)
T cd00833          80 EAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL  159 (421)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999998877554432 234567777777888899999999999


Q ss_pred             CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396        274 QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV  353 (829)
Q Consensus       274 ~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa  353 (829)
                      +||+++++++|+|++.||..|+++|++|++|++||||+|.+..+.....+...+.+++...++|||.+++|+++|||+++
T Consensus       160 ~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaa  239 (421)
T cd00833         160 RGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGV  239 (421)
T ss_pred             CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEE
Confidence            99999999999999999999999999999999999999998888888899999999988889999999999999999999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA  433 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A  433 (829)
                      +||+++++|+++|+++|++|+|++.++++.+.....|+..++.+++++||+++|++++|||||++|||||+.+|..|.++
T Consensus       240 lvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~a  319 (421)
T cd00833         240 VVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEA  319 (421)
T ss_pred             EEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHH
Confidence            99999999999999999999999999998776677888999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccccc
Q psy11396        434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK  513 (829)
Q Consensus       434 l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  513 (829)
                      |.++|+.......++++++.|+++||+.+|+|++++++++++|+++.+||++|+++|+|.++++..+++++++.++|+..
T Consensus       320 l~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (421)
T cd00833         320 LAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAP  399 (421)
T ss_pred             HHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEeeCCCccCCCC
Confidence            99999864322346899999999999999999999999999999999999999999999999988899999999999532


Q ss_pred             ccCccEEEEeccCCCCceEEEEe
Q psy11396        514 NKKKRMAAINSFGFSGTNAHIVL  536 (829)
Q Consensus       514 ~~~~~~a~v~s~G~gG~na~~vl  536 (829)
                       ..++++++|||||||+|+|+||
T Consensus       400 -~~~~~~~~~sfgfgg~n~~~vl  421 (421)
T cd00833         400 -AGPRRAGVSSFGFGGTNAHVIL  421 (421)
T ss_pred             -CCCeEEEEeCcCCCCceeEEeC
Confidence             2689999999999999999986

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.8e-65  Score=576.12  Aligned_cols=392  Identities=28%  Similarity=0.409  Sum_probs=346.7

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+|||||+++|.|.++++||++|++|++++++++  ||+...+           .+...+.+   +.||+..| ++++
T Consensus         2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~g~i---~~f~~~~~-~~~~   64 (406)
T PRK08439          2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKIT--LFDASDF-----------PVQIAGEI---TDFDPTEV-MDPK   64 (406)
T ss_pred             CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCC--CccccCC-----------CCceeEEc---CCcChhhc-CCHH
Confidence            689999999999999999999999999999999875  3432222           12333444   34888887 8999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +++.|++.++|++.++++||+|||+++.+++..++|+++|++.+.+...        ...+..++++.++...++.++++
T Consensus        65 ~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  144 (406)
T PRK08439         65 EVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGF  144 (406)
T ss_pred             HHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHH
Confidence            9999999999999999999999999999999999999999876654321        12345677888888899999999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQR  341 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd~~  341 (829)
                      |+..||++||++++.++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++     ++..|+|||.+
T Consensus       145 is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~  224 (406)
T PRK08439        145 ISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKD  224 (406)
T ss_pred             HHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999887     45689999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      ++|+++|||++++|||++++|+++|++||++|.|++.+.|+.+  ++.|+..++.++|++||+++|+  +|||||++|||
T Consensus       225 ~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~--~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgt  300 (406)
T PRK08439        225 RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH--ITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGT  300 (406)
T ss_pred             CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCC--CCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCC
Confidence            9999999999999999999999999999999999999988765  5667779999999999999999  79999999999


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                      ||+.+|..|..||.++|+..   ...++|++.|+++||+++|+|++++++++++|++|+|||++|+++|+|+++++.   
T Consensus       301 gt~~~D~~E~~al~~~f~~~---~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~---  374 (406)
T PRK08439        301 STPYNDKNETAALKELFGSK---EKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDY---  374 (406)
T ss_pred             cCCCCCHHHHHHHHHHhccc---CCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCccc---
Confidence            99999999999999999853   234689999999999999999999999999999999999999999999987653   


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                       ++.+.++     ...+++++|||||||+|+|+||+.+
T Consensus       375 -~~~~~~~-----~~~~~~l~nsfgfGG~n~~lvl~~~  406 (406)
T PRK08439        375 -IPNVARK-----AELNVVMSNSFGFGGTNGVVIFKKV  406 (406)
T ss_pred             -CCCcccc-----CCCCEEEEeeecCCCceEEEEEecC
Confidence             3333333     3578999999999999999999853

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.5e-65  Score=574.41  Aligned_cols=389  Identities=24%  Similarity=0.366  Sum_probs=335.6

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|.|.+.++||++|.+|+++++++|.  |+...          ...++.++.+++   ||+..+ ++++
T Consensus         2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~--~~~~~----------~~~~~~~~~v~~---~~~~~~-~~~~   65 (405)
T PRK09116          2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPE--WDRYD----------GLNTRLAAPIDD---FELPAH-YTRK   65 (405)
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCc--hhhcc----------CCCCceEEEecC---cChhHh-cCHH
Confidence            6899999999999999999999999999999999973  42110          112334455543   555443 6889


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCC-CCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNP-FSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPA  265 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~-~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~  265 (829)
                      +.+.||+.+++++.++++||+|||+.. ..+++.++||++|++.+.....        ...+..++++.+...++|.+++
T Consensus        66 ~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~  145 (405)
T PRK09116         66 KIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAV  145 (405)
T ss_pred             HHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHH
Confidence            999999999999999999999999954 3456789999999876643221        1234456777777888899999


Q ss_pred             HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCCC
Q psy11396        266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQ  340 (829)
Q Consensus       266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd~  340 (829)
                      +|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|. ..+.....|..++.++     +...|+|||.
T Consensus       146 ~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~  224 (405)
T PRK09116        146 NVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDA  224 (405)
T ss_pred             HHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcC
Confidence            999999999999999999999999999999999999999999999998 4666666677766553     4568999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      +++|+++|||++++|||++++|+++|++||++|+|++.++|+.+  ++.|+..++.++|+++|++++++|+|||||++||
T Consensus       225 ~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~--~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hg  302 (405)
T PRK09116        225 NRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHG  302 (405)
T ss_pred             CCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCc--CCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcC
Confidence            99999999999999999999999999999999999999999875  5678889999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccC-CcCCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI-KLENS  499 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~-~~~~~  499 (829)
                      |||+.+|..|.+||.++|+.      .+||++.|+++||++||+|++++++++++|++++|||++|+++|+|++ +++  
T Consensus       303 tgt~~~D~~E~~Ai~~~fg~------~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~--  374 (405)
T PRK09116        303 TATDRGDIAESQATAAVFGA------RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALD--  374 (405)
T ss_pred             ccCCCCCHHHHHHHHHHhCC------CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccC--
Confidence            99999999999999999974      378999999999999999999999999999999999999999999988 443  


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                        ++..+.++|     +.+++++|||||||+|+++||+
T Consensus       375 --~v~~~~~~~-----~~~~~l~nsfGfGG~n~~lvl~  405 (405)
T PRK09116        375 --YIMGEAREI-----DTEYVMSNNFAFGGINTSLIFK  405 (405)
T ss_pred             --ccCCCCccC-----CCCEEEEeeecCCcccEEEEEC
Confidence              344555544     3578999999999999999984

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=100.00  E-value=1.7e-64  Score=572.25  Aligned_cols=394  Identities=30%  Similarity=0.476  Sum_probs=347.0

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+|||||+++|.|.+.++||++|.+|++++.+++  +|+...+           .....+.++   .||+.+| ++++
T Consensus         1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~--~~~~~~~-----------~~~~~g~i~---~f~~~~~-~~~~   63 (407)
T TIGR03150         1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPIT--RFDASDL-----------PVKIAGEVK---DFDPEDY-IDKK   63 (407)
T ss_pred             CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECC--cccccCC-----------CCcEEEEeC---CcChhhc-CCHH
Confidence            479999999999999999999999999999999986  3432222           123344444   4899988 9999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +.+.|||+++|+++++++||+|||++++++++.++|+|+|++.+.+....        ..+..+.++.+.+...+.++++
T Consensus        64 ~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  143 (407)
T TIGR03150        64 EARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQ  143 (407)
T ss_pred             HHhhcCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHH
Confidence            99999999999999999999999999999999999999998766542221        2234566777788888999999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQR  341 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~~  341 (829)
                      +++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|.+.+|.....|...+.++.     ...++|||.+
T Consensus       144 is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~  223 (407)
T TIGR03150       144 ISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD  223 (407)
T ss_pred             HHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999988888888888764     3568999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      ++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.....|.+.++.+++++||+++|++|+||||||+|||
T Consensus       224 ~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~t  303 (407)
T TIGR03150       224 RDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGT  303 (407)
T ss_pred             CCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCC
Confidence            99999999999999999999999999999999999999998765555666788999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                      ||+.+|.+|..++.++|+..   ..+++|++.|+++||++||||++++++++++|++++|||++|+++|+|.++++.   
T Consensus       304 gt~~~D~~E~~a~~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~---  377 (407)
T TIGR03150       304 STPLGDKAETKAIKRVFGDH---AYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDY---  377 (407)
T ss_pred             CCCCCCHHHHHHHHHHhccC---CCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc---
Confidence            99999999999999999853   235899999999999999999999999999999999999999999999887642   


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                       ++.+..+|     +.+++++|||||||+|+|+||+
T Consensus       378 -v~~~~~~~-----~~~~~l~~s~gfgG~n~~~vl~  407 (407)
T TIGR03150       378 -VPNEARER-----KIDYALSNSFGFGGHNASLVFK  407 (407)
T ss_pred             -cCCCCccC-----CcCEEEEecccCCCceEEEEeC
Confidence             33344444     4689999999999999999984

FabB sequences should fall well below the noise cutoff of this model.

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=2.5e-64  Score=553.50  Aligned_cols=394  Identities=28%  Similarity=0.427  Sum_probs=344.6

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++|+|||+|+++|.|.+.+++|++|..|++++..++  +|+...+.           ++..+.+.+   | +.+  +++
T Consensus         2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~--~~~~~~~~-----------~~~~~~i~~---~-~~~--~~~   62 (412)
T COG0304           2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPIT--RFDASGLG-----------VKIAGEIKD---L-DDQ--IAK   62 (412)
T ss_pred             CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccc--cccccCCC-----------Ccccccccc---c-ccc--cch
Confidence            4789999999999999999999999999999998875  34433331           223333333   3 122  577


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCC-ceEEEEccccccccccc--------cCccc-cchhhhccccccch
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGS-LCGVFVGCAVSDYNKLI--------TDPKM-YNAYALMGESVSIL  263 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~-~~Gv~~g~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~  263 (829)
                      ++.++||+.++|++.++.+||+|||+. ...... ++|+++|++.++.....        ..... ++|+.++..+++..
T Consensus        63 ~~~~~~d~~~~~a~~Aa~eAl~dAgl~-~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  141 (412)
T COG0304          63 KERRFMDRFSQLAVVAAVEALEDAGLD-NELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLA  141 (412)
T ss_pred             HHhhcccHHHHHHHHHHHHHHHHcCCC-cccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchH
Confidence            888899999999999999999999998 233222 89999999987765332        22333 78999999999999


Q ss_pred             hhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCCCCC
Q psy11396        264 PARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHCYSF  338 (829)
Q Consensus       264 a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~~pf  338 (829)
                      ++.++..+|++||++++.++|+||..||..|+++|+.|++|++||||+|...++.....|..++.++.+     ..||||
T Consensus       142 a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPf  221 (412)
T COG0304         142 AGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPF  221 (412)
T ss_pred             HHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999998854     589999


Q ss_pred             CCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy11396        339 DQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEA  418 (829)
Q Consensus       339 d~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~  418 (829)
                      |++++||++|||++++|||++|+|++||++||++|.|++.+.|++|.+.+.|.+++..++|+.||++||++|+|||||.+
T Consensus       222 d~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYina  301 (412)
T COG0304         222 DKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINA  301 (412)
T ss_pred             CCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeC
Confidence            99999999999999999999999999999999999999999999998888888999999999999999999999999999


Q ss_pred             cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc-CCcC
Q psy11396        419 HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH-IKLE  497 (829)
Q Consensus       419 hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~-~~~~  497 (829)
                      |||+|+.+|..|..||+++|+....   .++|.|.|+.+||++||+|+.+++.++++|++|.+||++|+++|+|+ ++++
T Consensus       302 HgTsT~~nD~~E~~ai~~vfg~~~~---~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~  378 (412)
T COG0304         302 HGTSTPANDKAESLAIKRVFGEHAK---SLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLD  378 (412)
T ss_pred             CCccCCCccHHHHHHHHHHhccccc---CceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCccccccc
Confidence            9999999999999999999996433   38899999999999999999999999999999999999999999985 2222


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                          +++.+.++     ...++++.|||||||+|+.+|+..+
T Consensus       379 ----~v~~~~~~-----~~~~~~lsnsfGFGG~Na~lv~~~~  411 (412)
T COG0304         379 ----VVPNEART-----GAVRAALSNSFGFGGTNASLVFKRY  411 (412)
T ss_pred             ----ccCCcccc-----cceeEEEecccccCCcceEEEEecC
Confidence                34444332     2378999999999999999999865

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=100.00  E-value=1.7e-63  Score=562.83  Aligned_cols=401  Identities=25%  Similarity=0.376  Sum_probs=346.1

Q ss_pred             cccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCc---cccccCcceeecccccCcccccCCcCCCCCHHHhhcCC
Q psy11396        124 GQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDS---DKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMD  200 (829)
Q Consensus       124 ~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~~~~~d  200 (829)
                      +++|.|.++++||++|.+|+++++++|..+|+...+++.   .........++.+++++.. .||+.+|+..+    ..+
T Consensus         1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~f~~~~~~~~~----~~~   75 (421)
T PTZ00050          1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQS-EFDPSDFAPTK----RES   75 (421)
T ss_pred             CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcc-cCChhHcCCcc----cCC
Confidence            478999999999999999999999999877655443321   1111233445667777553 58888876544    359


Q ss_pred             HHHHHHHHHHHHHHHHcCCC-CCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhHhhhhc
Q psy11396        201 PQQRLFLQNCWTCIEDAGYN-PFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPARVSYFL  271 (829)
Q Consensus       201 ~~~~l~l~aa~~AL~dAGl~-~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ia~~l  271 (829)
                      ++++|++.++++||+|||++ +..++..++|+++|++.+.+....        .....++++.+++...+.++++|++.|
T Consensus        76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~  155 (421)
T PTZ00050         76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH  155 (421)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence            99999999999999999998 788888999999999876653221        234566788899999999999999999


Q ss_pred             cCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCCCCCCCCc
Q psy11396        272 NLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGF  345 (829)
Q Consensus       272 gl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pfd~~~~G~  345 (829)
                      |++||+++|+++|+||+.||.+|+++|++|+||++||||+|.+.+|..+..|...+.++      ++..|+|||.+++|+
T Consensus       156 ~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~  235 (421)
T PTZ00050        156 KLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF  235 (421)
T ss_pred             CCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCE
Confidence            99999999999999999999999999999999999999999988998888898888775      446899999999999


Q ss_pred             ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCC
Q psy11396        346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~  424 (829)
                      ++||||+++|||++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||++ ||++|+||||||+|||||+
T Consensus       236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~  315 (421)
T PTZ00050        236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP  315 (421)
T ss_pred             eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCC
Confidence            999999999999999999999999999999999999988777778889999999999999 9999999999999999999


Q ss_pred             CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeec
Q psy11396        425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFIN  504 (829)
Q Consensus       425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~  504 (829)
                      ++|.+|.+++.++|+...  ..+++|++.|+++||++||||++++++++++|++++|||++|+++|+|.++++     +.
T Consensus       316 ~~D~~E~~al~~~~~~~~--~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~-----~~  388 (421)
T PTZ00050        316 IGDKIELKAIKKVFGDSG--APKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLN-----LV  388 (421)
T ss_pred             CCCHHHHHHHHHHhcccc--CCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCcc-----cc
Confidence            999999999999998532  14689999999999999999999999999999999999999999999988743     22


Q ss_pred             cccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        505 TKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       505 ~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                      ....+|+  ....+++++|||||||+|+|+||+.
T Consensus       389 ~~~~~~~--~~~~~~~l~nsfgfgG~n~~lvl~~  420 (421)
T PTZ00050        389 QGKTAHP--LQSIDAVLSTSFGFGGVNTALLFTK  420 (421)
T ss_pred             CCcccCc--CCCCCEEEEeeecCCCeeEEEEEeC
Confidence            3333342  1257899999999999999999985

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=100.00  E-value=2.9e-63  Score=561.86  Aligned_cols=388  Identities=27%  Similarity=0.384  Sum_probs=341.1

Q ss_pred             CCEEEEecccccCCCCC---HHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396        115 DDIAIIGISGQFPKANN---VKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI  191 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~---~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i  191 (829)
                      .+|||||||+++|.|.+   .++||++|.+|++++++++..+   ..           ......|.+++   |+     +
T Consensus         1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~---~~-----------~~~~~~g~i~~---~~-----~   58 (407)
T cd00828           1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK---SR-----------FDRGVAGQIPT---GD-----I   58 (407)
T ss_pred             CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc---cc-----------CCccEEEEccC---CC-----c
Confidence            37999999999999999   9999999999999999987533   11           11233444443   44     6


Q ss_pred             CHHHhhcC---CHHHHHHHHHHHHHHHHcCCCCCC-CCCCceEEEEccccccccccccC----ccccchhhhccccc--c
Q psy11396        192 SPSEAEYM---DPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNKLITD----PKMYNAYALMGESV--S  261 (829)
Q Consensus       192 ~p~~~~~~---d~~~~l~l~aa~~AL~dAGl~~~~-i~~~~~Gv~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~--~  261 (829)
                      ++++++++   ||+++|+++++++||+|||+++++ ++..++|+++|++.+++......    .+...++.++....  +
T Consensus        59 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (407)
T cd00828          59 PGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPN  138 (407)
T ss_pred             CHHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccc
Confidence            78888888   999999999999999999999888 88999999999987765433221    12345666666666  8


Q ss_pred             chhhHhhhhccC-CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCC
Q psy11396        262 ILPARVSYFLNL-QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHC  335 (829)
Q Consensus       262 ~~a~~ia~~lgl-~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~  335 (829)
                      .++++|++.||+ +||+++|+++|+|++.||..|+++|++|+||++||||+|.+. +.....|..++.++.+     ..|
T Consensus       139 ~~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~  217 (407)
T cd00828         139 TVAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMS  217 (407)
T ss_pred             hHHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCccc
Confidence            999999999999 999999999999999999999999999999999999999988 8888899999999854     689


Q ss_pred             CCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396        336 YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       336 ~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~  415 (829)
                      +|||.+++|+++||||+++|||++++|+++|++||++|.|++.++|+.+..... +..++.++|++||++||++|+||||
T Consensus       218 ~pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~  296 (407)
T cd00828         218 RPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDV  296 (407)
T ss_pred             CCCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCE
Confidence            999999999999999999999999999999999999999999999988765544 7889999999999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy11396        416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK  495 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~  495 (829)
                      ||+|||||+.+|..|.+++.++|+...   .+++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.++
T Consensus       297 i~~hgtgt~~~D~~E~~ai~~~~~~~~---~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~  373 (407)
T cd00828         297 ISAHGTSTPANDVAESRAIAEVAGALG---APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVE  373 (407)
T ss_pred             EecccccCccccHHHHHHHHHHHhccC---CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccc
Confidence            999999999999999999999998643   45899999999999999999999999999999999999999999999884


Q ss_pred             cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEe
Q psy11396        496 LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL  536 (829)
Q Consensus       496 ~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl  536 (829)
                      +    .++.++.++|+..   ++++++|||||||+|+|+||
T Consensus       374 ~----~~~~~~~~~~~~~---~~~al~~s~gfgG~n~~lv~  407 (407)
T cd00828         374 H----LSVVGLSRDLNLK---VRAALVNAFGFGGSNAALVL  407 (407)
T ss_pred             c----ccccCcCccCCCC---ccEEEEecccCCCcceEEEC
Confidence            3    4567788888432   68999999999999999986

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=100.00  E-value=6.6e-63  Score=559.36  Aligned_cols=393  Identities=30%  Similarity=0.477  Sum_probs=349.5

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+|||||+++|+|.+.++||++|++|++++++++..++  ..           .....++.+++   ||+. |.++++
T Consensus         1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~--~~-----------~~~~~~~~i~~---~~~~-~~~~~~   63 (406)
T cd00834           1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDA--SG-----------FPSRIAGEVPD---FDPE-DYLDRK   63 (406)
T ss_pred             CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccc--cC-----------CCccEEEEcCC---CChh-hcCCHH
Confidence            4799999999999999999999999999999999875432  11           12334555554   6665 679999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +++.|||+++|+++++++||+|||+++.+++..++|+++|++.+++....        ..+..++++.+.+...+.++++
T Consensus        64 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  143 (406)
T cd00834          64 ELRRMDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQ  143 (406)
T ss_pred             HhccCCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHH
Confidence            99999999999999999999999999999999999999999887653222        2234566777777788889999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHCYSFDQR  341 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~~pfd~~  341 (829)
                      |+..||++||+++|+++|+|++.||..|+++|++|+||++||||+|.+..|..+..|...+.++.+     ..++|||.+
T Consensus       144 ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~  223 (406)
T cd00834         144 VAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD  223 (406)
T ss_pred             HHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999889999999999998865     478999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      ++|+++||||+++||++.++|+++|+++|++|+|++.++++.+.....|...++.++++++|+++|++++|||||++|||
T Consensus       224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~t  303 (406)
T cd00834         224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGT  303 (406)
T ss_pred             CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccc
Confidence            99999999999999999999999999999999999999998876666666899999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                      ||+.+|..|.+++.++|+..   .++++|++.|+++||+++|||++++++++++|+++++||++|+++|+|..+++    
T Consensus       304 gt~~~d~~E~~al~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~----  376 (406)
T cd00834         304 STPLNDAAESKAIKRVFGEH---AKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLD----  376 (406)
T ss_pred             cCccccHHHHHHHHHHhccc---CCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence            99999999999999999853   34689999999999999999999999999999999999999999999866543    


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEe
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL  536 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl  536 (829)
                      +++.+.++|+     .|+++||||||||+|+|+||
T Consensus       377 ~~~~~~~~~~-----~~~~l~~s~g~gG~n~~~vl  406 (406)
T cd00834         377 YVPNEAREAP-----IRYALSNSFGFGGHNASLVF  406 (406)
T ss_pred             ccCCCCcccc-----ccEEEEeeecCCceeeEEEC
Confidence            3446778884     38999999999999999996

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=100.00  E-value=3.4e-62  Score=550.24  Aligned_cols=394  Identities=21%  Similarity=0.336  Sum_probs=330.3

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|.|.++++||++|.+|++++++++..++.     .++....+...+..++.+++   |++..+ ++++
T Consensus         2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~   72 (410)
T PRK07103          2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQ-----VPDDAGAGLASAFIGAELDS---LALPER-LDAK   72 (410)
T ss_pred             CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCccccc-----ccccccccCCCceEEEEeCC---CChhhc-CCHH
Confidence            68999999999999999999999999999999998753221     11111111222334555554   444333 7888


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccc-------cccCccccchhhhccccccchhhHh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNK-------LITDPKMYNAYALMGESVSILPARV  267 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~i  267 (829)
                      ..+.|++.++|++.++++||+|||++  ..+..++|||+|++......       ....+..+.|+.....+++.++++|
T Consensus        73 ~~r~~~~~~~lal~Aa~eAl~dAgl~--~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  150 (410)
T PRK07103         73 LLRRASLSAQAALAAAREAWRDAALG--PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLC  150 (410)
T ss_pred             HhhcCCHHHHHHHHHHHHHHHhcCcC--CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHH
Confidence            89999999999999999999999995  45678999999976533211       1123344566666667778899999


Q ss_pred             hhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-------CCCCCCCCCC
Q psy11396        268 SYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-------PDGHCYSFDQ  340 (829)
Q Consensus       268 a~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-------~~~~~~pfd~  340 (829)
                      ++.||++||+++++++|+|++.||..|+++|++|+||++||+|++...++.....|..++.++       +...|+|||.
T Consensus       151 a~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~  230 (410)
T PRK07103        151 SEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ  230 (410)
T ss_pred             HHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC
Confidence            999999999999999999999999999999999999999999999888898888888888764       4568999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      +++|+++|||++++||+++++|+++|++||++|+|++.++|+.+  .+.|+..++.+++++||+++|++|+|||||++||
T Consensus       231 ~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~--~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hg  308 (410)
T PRK07103        231 DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR--GPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHG  308 (410)
T ss_pred             CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccC
Confidence            99999999999999999999999999999999999999999877  5678889999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC-CccCCcCCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL-NEHIKLENS  499 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~-~~~~~~~~~  499 (829)
                      |||+.+|..|.++|   |+.   ...++||++.|+++||+.+|||++++++++++|++++|||++|+++| ++.++|   
T Consensus       309 tgt~~~D~~E~~al---~~~---~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~---  379 (410)
T PRK07103        309 TGSPLGDETELAAL---FAS---GLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRW---  379 (410)
T ss_pred             CCCCCCCHHHHHHH---hcC---CCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCc---
Confidence            99999999999999   332   12358999999999999999999999999999999999999999987 555432   


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                         +..+.     .....+++++|||||||+|+|+||++
T Consensus       380 ---v~~~~-----~~~~~~~~l~~s~gfGG~n~~~vl~~  410 (410)
T PRK07103        380 ---VGSTA-----ESARIRYALSLSFGFGGINTALVLER  410 (410)
T ss_pred             ---cCCCC-----cCCCCCEEEEecccCCCceEEEEEeC
Confidence               22221     22357899999999999999999974

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=7.5e-62  Score=537.99  Aligned_cols=368  Identities=26%  Similarity=0.385  Sum_probs=314.2

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|.|. .++||++|.+|+++|.+++.  |+  .    .+.                  |....++..+ 
T Consensus         2 ~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~--~~--~----~~~------------------~~~~~~~~~~-   53 (381)
T PRK05952          2 MKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQP--FP--E----LPP------------------LPLGLIGNQP-   53 (381)
T ss_pred             CeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCc--cc--c----ccc------------------ccceeecccc-
Confidence            5899999999999999 99999999999999998763  21  0    000                  0000000111 


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccccc--------C---ccccchhhhccccccch
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLIT--------D---PKMYNAYALMGESVSIL  263 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~  263 (829)
                        ..++   +++..++++||+|||+++.   ..++||++|++.+.......        .   ...+.+..+...++|.+
T Consensus        54 --~~~~---~~~~~a~~~Al~dagl~~~---~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  125 (381)
T PRK05952         54 --SSLE---DLTKTVVTAALKDAGLTPP---LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQA  125 (381)
T ss_pred             --cccc---HHHHHHHHHHHHhcCCCCC---CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHH
Confidence              1133   3556889999999999753   36899999998664322111        1   12456777888899999


Q ss_pred             hhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC
Q psy11396        264 PARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN  343 (829)
Q Consensus       264 a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~  343 (829)
                      ++++++.||++||++++.++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++.+ .|+|||.+++
T Consensus       126 a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~rPfd~~r~  204 (381)
T PRK05952        126 AIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKT-GAYPFDRQRE  204 (381)
T ss_pred             HHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCC-CCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999998899999999999999875 5999999999


Q ss_pred             CcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396        344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT  423 (829)
Q Consensus       344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt  423 (829)
                      |+++|||++++|||++++|+++|++||++|+|++.++|+.+...+.|+..++.++|++||+++|++|+||||||+|||||
T Consensus       205 G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt  284 (381)
T PRK05952        205 GLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTAT  284 (381)
T ss_pred             CccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCC
Confidence            99999999999999999999999999999999999999988777788899999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396        424 KLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI  503 (829)
Q Consensus       424 ~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v  503 (829)
                      +.+|.+|.++|.++|+.      .++|++.|+++||+++|+|++++++++++|++++|||++|+++|++.+++.      
T Consensus       285 ~~~D~~E~~al~~~fg~------~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v------  352 (381)
T PRK05952        285 RLNDQREANLIQALFPH------RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFV------  352 (381)
T ss_pred             CCCcHHHHHHHHHHcCC------CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcC------
Confidence            99999999999999963      379999999999999999999999999999999999999999886654432      


Q ss_pred             ccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                       .+.     .....+++++|||||||+|+++||+
T Consensus       353 -~~~-----~~~~~~~~l~~s~gfGG~na~lvl~  380 (381)
T PRK05952        353 -RQA-----QQSPLQNVLCLSFGFGGQNAAIALG  380 (381)
T ss_pred             -CCc-----ccCCCCEEEEeeecCCCeeEEEEEe
Confidence             111     2235789999999999999999996

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2.2e-59  Score=528.93  Aligned_cols=393  Identities=23%  Similarity=0.332  Sum_probs=326.5

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      .+.+|+|||||+++|.|.+.++||++|++|++++++++  +|+...+           .++..|.++   .|++      
T Consensus         9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~g~~~---~~~~------   66 (425)
T PRK06501          9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTIT--RFPTEGL-----------RTRIAGTVD---FLPE------   66 (425)
T ss_pred             CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCC--cccccCC-----------CCceEEEEe---eccc------
Confidence            45689999999999999999999999999999999875  4432221           123344432   1222      


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCC--------------CCceEEEEcccccc---cccccc-Cccccchhh
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLS--------------GSLCGVFVGCAVSD---YNKLIT-DPKMYNAYA  254 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~--------------~~~~Gv~~g~~~~~---~~~~~~-~~~~~~~~~  254 (829)
                       .....+++.+++++.++++||+|||++..++.              +.+++++.++....   |..+.. ......+..
T Consensus        67 -~~~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (425)
T PRK06501         67 -SPFGASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDAL  145 (425)
T ss_pred             -ccccccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChh
Confidence             12234677889999999999999999643322              45778877765432   222211 111122233


Q ss_pred             hccccccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC----
Q psy11396        255 LMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----  330 (829)
Q Consensus       255 ~~~~~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls----  330 (829)
                      +.....+.++++|+..||++||+++|+++|+|++.||.+|+++|++|++|++||||+|...++..+..|..++.++    
T Consensus       146 ~~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~  225 (425)
T PRK06501        146 HERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQND  225 (425)
T ss_pred             hhhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCC
Confidence            4555667889999999999999999999999999999999999999999999999999888999988998888876    


Q ss_pred             -CCCCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy11396        331 -PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN  409 (829)
Q Consensus       331 -~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~  409 (829)
                       ++..|+|||.+++|+++|||++++|||+.++|+++|++||++|.|++.++|+.+.....|+...+.++|++||+++|++
T Consensus       226 ~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~  305 (425)
T PRK06501        226 PPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLT  305 (425)
T ss_pred             CCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence             4568999999999999999999999999999999999999999999999998887777788889999999999999999


Q ss_pred             CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCC
Q psy11396        410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI  489 (829)
Q Consensus       410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~  489 (829)
                      |+|||||++|||||+.+|..|..+|.++|+.   ..+.+||++.|+++||+.+|||++++++++++|++|+|||++|+++
T Consensus       306 p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~---~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~  382 (425)
T PRK06501        306 PEQIDYINAHGTSTPENDKMEYLGLSAVFGE---RLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDN  382 (425)
T ss_pred             HHHcCEEEecCccCcchHHHHHHHHHHHhcc---cCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCC
Confidence            9999999999999999999999999999974   2345899999999999999999999999999999999999999999


Q ss_pred             CCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       490 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      |+|+++++..    +...+     ..+.+++++|||||||+|+|+||+++|
T Consensus       383 ~~~~~~~~~~----~~~~~-----~~~~~~~l~ns~gfgG~n~~~vl~~~~  424 (425)
T PRK06501        383 PDPAIPLDVV----PNVAR-----DARVTAVLSNSFGFGGQNASLVLTAEP  424 (425)
T ss_pred             CCCCCCcccC----CCccc-----CCCCCEEEEeCccCCCeeEEEEEecCC
Confidence            9999976532    22222     235789999999999999999999876

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=100.00  E-value=5.3e-59  Score=506.76  Aligned_cols=325  Identities=26%  Similarity=0.375  Sum_probs=294.2

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhHhhhh
Q psy11396        199 MDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       199 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      |++.+++++.++++|++|||+.   .++.++||++|++.+.+..+.        ..+..++|+.++..++|.++++|++.
T Consensus         1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~   77 (342)
T PRK14691          1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK   77 (342)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence            5788999999999999999986   456789999999877653221        24567789999999999999999999


Q ss_pred             ccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCCCCCCCC
Q psy11396        271 LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG  344 (829)
Q Consensus       271 lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pfd~~~~G  344 (829)
                      ||++||+++++++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++      ++..|+|||.+++|
T Consensus        78 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G  157 (342)
T PRK14691         78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDG  157 (342)
T ss_pred             hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999888899988886      55789999999999


Q ss_pred             cccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396        345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       345 ~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~  424 (829)
                      +++||||+++|||++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||+++|++|+||||||+|||||+
T Consensus       158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~  237 (342)
T PRK14691        158 FVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTP  237 (342)
T ss_pred             ccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCc
Confidence            99999999999999999999999999999999999999877667888999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCCCCeee
Q psy11396        425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LENSPFFI  503 (829)
Q Consensus       425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~~~~~v  503 (829)
                      .+|++|..||.++|+..    ..+||+++|+++||+++|||+++++.++++|++++|||++|+++|+|.++ ++    ++
T Consensus       238 ~~D~~E~~Ai~~~fg~~----~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~----~v  309 (342)
T PRK14691        238 VGDLGEINAIKHLFGES----NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLN----II  309 (342)
T ss_pred             CCCHHHHHHHHHHhCCC----CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccC----cc
Confidence            99999999999999852    35899999999999999999999999999999999999999999999873 22    23


Q ss_pred             ccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      ..+.++|     +.+++++|||||||+|+|+||+.+
T Consensus       310 ~~~~~~~-----~~~~al~nsfgfGG~n~~lvl~~~  340 (342)
T PRK14691        310 AGNAQPH-----DMTYALSNGFGFAGVNASILLKRW  340 (342)
T ss_pred             cCCCccC-----CCCEEEEeCccCCCeeEEEEEeec
Confidence            4444333     478999999999999999999976

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.1e-57  Score=506.21  Aligned_cols=369  Identities=18%  Similarity=0.220  Sum_probs=306.4

Q ss_pred             CCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396        112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI  191 (829)
Q Consensus       112 ~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i  191 (829)
                      +..++|||||||+++|.|.++++||++|.+|+++ ..++..+|..  +           ...   ...+   +|...+ +
T Consensus         3 ~~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~--~-----------~~~---~~~~---~~~~~~-~   61 (398)
T PRK06519          3 MQPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAP--Y-----------PVH---PLPE---IDWSQQ-I   61 (398)
T ss_pred             CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccC--c-----------Ccc---cccc---cChhhc-C
Confidence            3467999999999999999999999999999997 2222111110  0           001   1122   122222 4


Q ss_pred             CHH-HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------------------cCcccc
Q psy11396        192 SPS-EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------------------TDPKMY  250 (829)
Q Consensus       192 ~p~-~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------------------~~~~~~  250 (829)
                      +++ ..++||+.+++++.++++||+|||++....+..++||++|++.+......                    ..+..+
T Consensus        62 ~~~~~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (398)
T PRK06519         62 PKRGDQRQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTEL  141 (398)
T ss_pred             CchhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCcc
Confidence            555 67899999999999999999999997666666799999999876532211                    123457


Q ss_pred             chhhhccccccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC
Q psy11396        251 NAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS  330 (829)
Q Consensus       251 ~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls  330 (829)
                      +|+.++..++|.++++|++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|...++..+..|...+.++
T Consensus       142 ~p~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls  221 (398)
T PRK06519        142 RPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLL  221 (398)
T ss_pred             ChhhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccC
Confidence            88899999999999999999999999999999999999999999999999999999999999988998888999999987


Q ss_pred             CCCCCCC-CCC---CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHc
Q psy11396        331 PDGHCYS-FDQ---RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKF  406 (829)
Q Consensus       331 ~~~~~~p-fd~---~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~A  406 (829)
                      .. .++| ||.   +++||++|||++++|||++++|++||++|||+|.|++...++       .+..++.++|++||++|
T Consensus       222 ~~-~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~-------~~~~~~~~am~~AL~~A  293 (398)
T PRK06519        222 KG-GWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR-------RAPGDLEASLERLLKPA  293 (398)
T ss_pred             CC-CCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC-------CChHHHHHHHHHHHHHC
Confidence            64 4555 666   699999999999999999999999999999999999643221       13457899999999999


Q ss_pred             CCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCC
Q psy11396        407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTIN  486 (829)
Q Consensus       407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~  486 (829)
                      |+ |+|||||++|||||+.+|..|.+||.++|+        .||+|+|+++||+++|+|+++++.++++|++|+|||++|
T Consensus       294 gl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~--------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n  364 (398)
T PRK06519        294 GG-LAAPTAVISGATGAHPATAEEKAALEAALA--------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFD  364 (398)
T ss_pred             CC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC--------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCC
Confidence            99 899999999999999999999999999995        479999999999999999999999999999999999999


Q ss_pred             CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                      +   +|+.                 +.....+.++|+++|++|.-.-.++|.
T Consensus       365 ~---~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (398)
T PRK06519        365 A---SGEK-----------------PMSGAAREAVVTTVGHWRGEGMALVEA  396 (398)
T ss_pred             C---Cccc-----------------CccccccEEEEEeeccCCcceeEEEEe
Confidence            7   2221                 123456889999999999777666654

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=9.3e-56  Score=495.14  Aligned_cols=378  Identities=22%  Similarity=0.297  Sum_probs=311.9

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCC-CceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGR-NCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      ++|||||+|+++|.|.+.++||++|++|+ +++++++.  |+      ..       .....+.+++   |+.  ..+++
T Consensus         2 ~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~--~~------~~-------~~~~~g~~~~---~~~--~~~~~   61 (392)
T PRK09185          2 TPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDF--WL------VD-------LPTWVGEVVG---VEL--PALPA   61 (392)
T ss_pred             CcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcc--cc------cc-------CCeEEEEecC---ccc--ccCCH
Confidence            58999999999999999999999999999 99998752  21      00       0011122332   442  12677


Q ss_pred             HHhhcCCHHHHHHHHHHHH---HHHHcCCCCCCCCCCceEEEEccccccccccc-------cCc-cccchhhhccccccc
Q psy11396        194 SEAEYMDPQQRLFLQNCWT---CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-------TDP-KMYNAYALMGESVSI  262 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~---AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~  262 (829)
                      +..+.+++..+++..++.+   |+.|++   .+.+..++||++|++.+......       ... ....++.++....+.
T Consensus        62 ~~~~~~~~~~~~~~~a~~~~~~a~~~~~---~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (392)
T PRK09185         62 ALAAFDCRNNRLALLALQQIEPAVEAAI---ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGS  138 (392)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHhhc---ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccH
Confidence            7788889888888777666   555554   34566789999998876432221       111 112345566677888


Q ss_pred             hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC
Q psy11396        263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA  342 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~  342 (829)
                      ++++|++.||++||+++++++|+|++.||.+|+++|++|+||++||||+|.. .+.....|...+.++. ..|+|||.++
T Consensus       139 ~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~-~~~~~~~~~~~~~l~~-~~~~Pfd~~~  216 (392)
T PRK09185        139 LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSL-CRLTLNGFNSLESLSP-QPCRPFSANR  216 (392)
T ss_pred             HHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeecccc-ChHHHHHHHhccccCC-CccCCCcCCC
Confidence            9999999999999999999999999999999999999999999999999974 5566677888887764 6799999999


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +|+++|||++++||+++     ++.+  ++|.|++.++|+.+...+.|...++.+++++||++||++|+|||||++||||
T Consensus       217 ~G~~~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtg  289 (392)
T PRK09185        217 DGINIGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTA  289 (392)
T ss_pred             CccceeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCC
Confidence            99999999999999987     2333  4799999999998877777888899999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                      |+.+|..|..||.++|+.      .+||++.|+++||+++|||++++++++++|++|++||++|+++|+|.++++    +
T Consensus       290 t~~~D~~E~~al~~~f~~------~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~----~  359 (392)
T PRK09185        290 TPLNDAMESRAVAAVFGD------GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPL----Y  359 (392)
T ss_pred             CcCCCHHHHHHHHHHhCC------CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence            999999999999999974      257999999999999999999999999999999999999999999998753    3


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      +..+.++|     .++++++|||||||+|+|+||+..
T Consensus       360 ~~~~~~~~-----~~~~~l~~s~gfgG~n~~lvl~~~  391 (392)
T PRK09185        360 LVENAQAL-----AIRYVLSNSFAFGGNNCSLIFGRA  391 (392)
T ss_pred             cCCCCccC-----CCCEEEEeCccCCceeEEEEEEeC
Confidence            44454444     378999999999999999999864

>KOG1680|consensus

Probab=100.00  E-value=7.9e-42  Score=341.54  Aligned_cols=240  Identities=22%  Similarity=0.278  Sum_probs=214.9

Q ss_pred             eEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc
Q psy11396        557 MVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR  636 (829)
Q Consensus       557 ~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~  636 (829)
                      .+-.|.-|+|+++             |+++..++.+|.++|..++.|+++.++|+||.|+.||+|.|+.++.....+.-.
T Consensus        46 ~I~lItlNRP~~~-------------Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~~~  112 (290)
T KOG1680|consen   46 GIALITLNRPKAL-------------NALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQDVS  112 (290)
T ss_pred             CeEEEEeCChHHh-------------ccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccccccc
Confidence            4555666777765             556778899999999999999999999999999999999999998763332221


Q ss_pred             -ccccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHH
Q psy11396        637 -FTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL  715 (829)
Q Consensus       637 -~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~l  715 (829)
                       ......+..+..++||+||+|||+|+|||++|+++||+||++++++|++++.++|++|.+|++++|+|.||.++|+|++
T Consensus       113 ~~~~~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~  192 (290)
T KOG1680|consen  113 DGIFLRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMI  192 (290)
T ss_pred             cccccchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHH
Confidence             1123333344459999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChH
Q psy11396        716 FTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPS  795 (829)
Q Consensus       716 l~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~  795 (829)
                      +||++++++||+++||||+|||.+++.+++.+|+++|++.||.+++..|+.++..++..+.+.+..|...+...+ ..++
T Consensus       193 ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~-~~~d  271 (290)
T KOG1680|consen  193 LTGRRLGAQEAKKIGLVNKVVPSGDALGEAVKLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTF-ATED  271 (290)
T ss_pred             HhcCcccHHHHHhCCceeEeecchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhh-hhHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999 7889


Q ss_pred             HHHHHHHHHhhcccc
Q psy11396        796 VITNIERYFDKSIKK  810 (829)
Q Consensus       796 ~~e~~~~~~~k~~~~  810 (829)
                      .+|+|.+|.+||..+
T Consensus       272 ~~Eg~~~f~~kr~~~  286 (290)
T KOG1680|consen  272 RLEGMTAFAEKRKPK  286 (290)
T ss_pred             HHHHHHHhcccCCcc
Confidence            999999999887533

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=100.00  E-value=3.3e-39  Score=355.69  Aligned_cols=319  Identities=29%  Similarity=0.413  Sum_probs=277.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc---cCccccchhhhccccccchhhHhhhhccCCCcce
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI---TDPKMYNAYALMGESVSILPARVSYFLNLQGPCL  278 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~  278 (829)
                      +++|+++|+++||++||++++.......++|+|+..+.+....   .......|+.+.+...+.++++|+..+|++||++
T Consensus        11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~   90 (332)
T cd00825          11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY   90 (332)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence            6789999999999999999555555566999998876653211   2234567778888888889999999999999999


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK  358 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~  358 (829)
                      +|+.+|+|++.||++|+++|++|++|.+||+|+|.+..+.........+...++..++||+...+|+++|||++++||++
T Consensus        91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~  170 (332)
T cd00825          91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE  170 (332)
T ss_pred             ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence            99999999999999999999999999999999999887776655666667778888999999999999999999999999


Q ss_pred             chhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHh
Q psy11396        359 LKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF  438 (829)
Q Consensus       359 ~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~  438 (829)
                      .+.|+++|.+++++|.+++..+++.......+....+.++++++|+++|++++||||+++|++|++..|..|.+++...+
T Consensus       171 ~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~  250 (332)
T cd00825         171 LEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEF  250 (332)
T ss_pred             HHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHh
Confidence            99999999999999999999998876665677788999999999999999999999999999999999999999998887


Q ss_pred             cccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCcc
Q psy11396        439 NKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKR  518 (829)
Q Consensus       439 ~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  518 (829)
                      +.     .++++.+.|..+||+.+|++++++++++++++++.+||++|+.++++...      .+..+.+     ....+
T Consensus       251 ~~-----~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~------~~~~~~~-----~~~~~  314 (332)
T cd00825         251 GD-----KSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGL------NIVTETT-----PRELR  314 (332)
T ss_pred             CC-----CCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccC------cccCCCC-----CCCCC
Confidence            63     14788999999999999999999999999999999999999999988221      2333322     23468


Q ss_pred             EEEEeccCCCCceEEEEe
Q psy11396        519 MAAINSFGFSGTNAHIVL  536 (829)
Q Consensus       519 ~a~v~s~G~gG~na~~vl  536 (829)
                      ++++++||+||+++|+||
T Consensus       315 ~~l~~~~G~Gg~~~~~vl  332 (332)
T cd00825         315 TALLNGFGLGGTNATLVL  332 (332)
T ss_pred             EEEEeeecCCCeeEEEeC
Confidence            999999999999999986

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PLN02888 enoyl-CoA hydratase

Probab=100.00  E-value=4.2e-40  Score=348.39  Aligned_cols=235  Identities=19%  Similarity=0.270  Sum_probs=207.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++...............+..+..+||||||+|||+
T Consensus        30 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~  109 (265)
T PLN02888         30 ALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFKGDVKDVETDPVAQMERCRKPIIGAINGF  109 (265)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhccchhhHHHHHHHHHHHhCCCCEEEEECCe
Confidence            35888999999999999999999999999999999999999999876432111100011112233456999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|.++
T Consensus       110 a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~  189 (265)
T PLN02888        110 AITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWGLVNHVVEESE  189 (265)
T ss_pred             eechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCccEeeChHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhh-cCChHHHHHHHHHHhhccccCCCcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTF-VNNPSVITNIERYFDKSIKKNNSKI  815 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~e~~~~~~~k~~~~~~~k~  815 (829)
                      +.+++.+++++|+..+|.+++.+|+.++..+...+++.+..|...+...+ ..+++.++++++|++||..|+.+|+
T Consensus       190 l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~d~~e~~~af~ekr~~~~~~~~  265 (265)
T PLN02888        190 LLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYNGMTKEQFQKMQEFIAGRSSKKPSKL  265 (265)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999998888888889888887777775 2589999999999999988777764

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=100.00  E-value=1.3e-39  Score=345.02  Aligned_cols=246  Identities=36%  Similarity=0.613  Sum_probs=208.9

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|+|.+.++||++|.+|++++.++|. ||+...++++.....+....+.+++++ ...||+.+++++++
T Consensus         2 ~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   79 (254)
T PF00109_consen    2 RRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYYDPPSRVAGEIDDKKGGFID-DFDFDAYFFGIPPR   79 (254)
T ss_dssp             S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTSTTSSCSEEECBSSSEESSST-TTCGGGTSTCHHHH
T ss_pred             CEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeecc-ccccccccccCCcccccccccccceee-ecccccccccccch
Confidence            7899999999999999999999999999999999999 999999987777777777777788888 77899999999999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCc-eEEEEccccccccccc----cC--ccccchhhhccccccchhhHh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSL-CGVFVGCAVSDYNKLI----TD--PKMYNAYALMGESVSILPARV  267 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~-~Gv~~g~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~a~~i  267 (829)
                      +++.||++++|++.++++||+|||+.+..+++.+ +||++|++.+++..+.    ..  +....++.+...+++.++++|
T Consensus        80 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~i  159 (254)
T PF00109_consen   80 EARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRI  159 (254)
T ss_dssp             HHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHH
T ss_pred             hhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccch
Confidence            9999999999999999999999999988777765 9999999988653221    11  234445334445899999999


Q ss_pred             hhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        268 SYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       268 a~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ++.||++||+++|+++|+||+.||+.|+++|++|++|++||||+|...++..+..|..++++++++.++|||.+++|+++
T Consensus       160 a~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~  239 (254)
T PF00109_consen  160 AILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVL  239 (254)
T ss_dssp             HHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-B
T ss_pred             hhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEE
Confidence            99999999999999999999999999999999999999999999988999999999999999888899999999999999


Q ss_pred             ccceEEEEEccchhh
Q psy11396        348 GEGVGVLMLKKLKDA  362 (829)
Q Consensus       348 gEGaaalvL~~~~~A  362 (829)
                      |||++++|||++++|
T Consensus       240 gEGa~~~vLe~~~~A  254 (254)
T PF00109_consen  240 GEGAGALVLERLEHA  254 (254)
T ss_dssp             B-EEEEEEEEEHHHH
T ss_pred             ECceEEEEEEEhhhC
Confidence            999999999999886

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional

Probab=100.00  E-value=1.5e-39  Score=346.05  Aligned_cols=233  Identities=14%  Similarity=0.210  Sum_probs=206.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC--CeeeccCChhhhhhhhcccc---cccc--cccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE--NYFACGGTKEGLLKIQKGIS---RFTD--EKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g--~~F~~G~D~~~~~~~~~~~~---~~~~--~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++++++|+++|+|||||.|  ++||+|.|++++........   .+..  ...+..+..+|||||
T Consensus        32 ~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  111 (278)
T PLN03214         32 VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKTSAARYAEFWLTQTTFLVRLLRSRLATV  111 (278)
T ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccccchHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence            5889999999999999999999999999999997  79999999988642111100   0100  112233456999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccc-cCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF-TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl-~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      |+|||+|+|||++|+++|||||++++++|++||+++|+ +|+++++++|++++|+.++++++++|+.|+++||+++||||
T Consensus       112 AaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~~a~~llltg~~~~a~eA~~~Glv~  191 (278)
T PLN03214        112 CAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVRPAEAKQLGLID  191 (278)
T ss_pred             EEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHHHHHHHHHcCCccCHHHHHHcCCCc
Confidence            99999999999999999999999999999999999999 59888899999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccCCC
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNS  813 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~~~  813 (829)
                      +|+|.+++.+++.+++++|+..+|.+++.+|+.++..+...++..++.|...+...+ .+++++|++++|++|.+|||.+
T Consensus       192 ~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~egi~aflek~~~~~~~  270 (278)
T PLN03214        192 EVVPAAALMEAAASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKML-SEPSIIKALGGVMERLSSGKEK  270 (278)
T ss_pred             EecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHhhcccc
Confidence            999999999999999999999999999999999998887788889999988888877 8999999999999999988887


Q ss_pred             cc
Q psy11396        814 KI  815 (829)
Q Consensus       814 k~  815 (829)
                      |-
T Consensus       271 ~~  272 (278)
T PLN03214        271 KQ  272 (278)
T ss_pred             cc
Confidence            63

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-39  Score=343.23  Aligned_cols=227  Identities=19%  Similarity=0.313  Sum_probs=203.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++......... ......+..+..+||||||+|||
T Consensus        24 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G  103 (257)
T PRK05862         24 ALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFMDVYKGDYITNWEKVARIRKPVIAAVAG  103 (257)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhccchhHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence            35888999999999999999999999999999999999999999886532111000 00111233455699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|+|.+
T Consensus       104 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  183 (257)
T PRK05862        104 YALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAEAERAGLVSRVVPAD  183 (257)
T ss_pred             EEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCCEeeCHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++++.+++++|+..+|.+++.+|++++..+...+.+.++.|...+...+ .++++++++++|++|+.
T Consensus       184 ~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~~~~e~i~af~~kr~  251 (257)
T PRK05862        184 KLLDEALAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLF-ATEDQKEGMAAFVEKRK  251 (257)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhccCC
Confidence            999999999999999999999999999999888889999999999998888 78999999999999874

>PRK08259 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.7e-39  Score=339.25  Aligned_cols=228  Identities=17%  Similarity=0.241  Sum_probs=201.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......... ..........+.+||||||+|||
T Consensus        23 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G  102 (254)
T PRK08259         23 VRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGRGNRLHPSGDGPMGPSRMRLSKPVIAAVSG  102 (254)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcccchhhhhhhcchhhhHHhcCCCCEEEEECC
Confidence            46889999999999999999999999999999999999999999986532111000 00011111223589999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++|||||++++++|++||+++|++|.+|++++|++++|+.++++++++|++|+++||+++||||+|+|.+
T Consensus       103 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~  182 (254)
T PRK08259        103 YAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRPVDADEALAIGLANRVVPKG  182 (254)
T ss_pred             EEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCEeeChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcccc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKK  810 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~  810 (829)
                      ++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ . ++.+|++.+|++|+.|+
T Consensus       183 ~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~-~d~~egi~af~~~~~~~  251 (254)
T PRK08259        183 QARAAAEELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL-A-AEALEGAARFAAGAGRH  251 (254)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH-h-hHHHHHHHHHHhhhccc
Confidence            999999999999999999999999999998777788999898888777777 4 99999999999988544

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.7e-39  Score=341.39  Aligned_cols=226  Identities=19%  Similarity=0.271  Sum_probs=202.6

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcc-cc----cccc--cccccccccCCCCE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKG-IS----RFTD--EKSYCMPLYCKIPV  653 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~-~~----~~~~--~~~~~~~~~~~kp~  653 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...... ..    .+..  ...+..+..+||||
T Consensus        24 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  103 (260)
T PRK05980         24 LNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVALRDFVRRGQAMTARLEAFPKPV  103 (260)
T ss_pred             ccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCCE
Confidence            5778999999999999999999999999999998 799999999886432110 00    0000  11223345599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||
T Consensus       104 Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~  183 (260)
T PRK05980        104 IAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLVN  183 (260)
T ss_pred             EEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHHHHHHcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|+|++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++.++++++|++|+.
T Consensus       184 ~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~kr~  257 (260)
T PRK05980        184 AVVPHEELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMA-GSADLREGLAAWIERRR  257 (260)
T ss_pred             cccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhccCC
Confidence            999999999999999999999999999999999998888889999999999998888 79999999999999874

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.4e-39  Score=339.24  Aligned_cols=225  Identities=18%  Similarity=0.271  Sum_probs=200.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....... .............+||||||+|||+
T Consensus        23 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~kPvIaav~G~  101 (254)
T PRK08252         23 ARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARGERPS-IPGRGFGGLTERPPRKPLIAAVEGY  101 (254)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcccchh-hhHHHHHHHHHhcCCCCEEEEECCE
Confidence            357889999999999999999999999999999999999999998875321111 0000000011134899999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|+|+++
T Consensus       102 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~  181 (254)
T PRK08252        102 ALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPGQ  181 (254)
T ss_pred             EehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHHHHHcCCcceecCcch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++++++++++|++|+
T Consensus       182 l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~eg~~af~~kr  247 (254)
T PRK08252        182 ALDAALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVF-TSADAKEGATAFAEKR  247 (254)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCC
Confidence            99999999999999999999999999998877788999999988888888 7999999999999976

>PLN02600 enoyl-CoA hydratase

Probab=100.00  E-value=4.1e-39  Score=338.61  Aligned_cols=227  Identities=20%  Similarity=0.365  Sum_probs=202.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhccc-cccc--ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGI-SRFT--DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~-~~~~--~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.+++++++.|+++|+|||+|. |++||+|+|++++....... ..+.  ....+..+..+||||||+
T Consensus        15 ~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa   94 (251)
T PLN02600         15 AKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSPSEVQKFVNSLRSTFSSLEALSIPTIAV   94 (251)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            3588899999999999999999999999999998 58999999999864321110 0000  011223344599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.++++||+++||||+++
T Consensus        95 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv  174 (251)
T PLN02600         95 VEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCV  174 (251)
T ss_pred             ecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++++|++++|++|+.
T Consensus       175 ~~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~ekr~  245 (251)
T PLN02600        175 PAGEAYEKALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVL-KTKDRLEGLAAFAEKRK  245 (251)
T ss_pred             ChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999998877889999999999998888 79999999999999874

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=100.00  E-value=4.5e-39  Score=339.34  Aligned_cols=226  Identities=22%  Similarity=0.350  Sum_probs=203.4

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-cccccccccccCCCCEEEEeccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-TDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|++++.......... .....+..+..+||||||+|||+
T Consensus        23 ~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  102 (255)
T PRK09674         23 RNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEKDLAATLNDPRPQLWQRLQAFNKPLIAAVNGY  102 (255)
T ss_pred             cCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhccchhhhHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            68899999999999999999999999999999999999999998864321110000 01112334456999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.++++||+++||||+|+|+++
T Consensus       103 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~  182 (255)
T PRK09674        103 ALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPEL  182 (255)
T ss_pred             eehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +.+++.+++++|+..+|.+++.+|+.++......+.+.++.|...+...+ .++++++++++|++|+.
T Consensus       183 ~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~i~af~~kr~  249 (255)
T PRK09674        183 TLERALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLA-ATEDRHEGISAFLEKRT  249 (255)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhccCC
Confidence            99999999999999999999999999998888889999999999888888 79999999999999863

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.3e-39  Score=339.69  Aligned_cols=227  Identities=15%  Similarity=0.213  Sum_probs=202.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cccccc--cccccc-ccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GISRFT--DEKSYC-MPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~~~~~--~~~~~~-~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++++++|+++|+|||+|.|+.||+|+|++++..... ....+.  ....+. .+..+||||||+
T Consensus        19 ~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa   98 (255)
T PRK06563         19 KRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGGFPFPEGGIDPWGTVGRRLSKPLVVA   98 (255)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccchhhhhhhhhHHHHHHHhcCCCCEEEE
Confidence            3588999999999999999999999999999999999999999988753211 111110  111111 244599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++||||+|+
T Consensus        99 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv  178 (255)
T PRK06563         99 VQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQEALRLGLVQEVV  178 (255)
T ss_pred             EcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCCcEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++.+++.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .+++++|++.+|++||.
T Consensus       179 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~  249 (255)
T PRK06563        179 PPGEQLERAIELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLF-TSEDAKEGVQAFLERRP  249 (255)
T ss_pred             CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence            999999999999999999999999999999998877889999999988888888 78899999999999874

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=100.00  E-value=3.8e-37  Score=338.66  Aligned_cols=336  Identities=15%  Similarity=0.078  Sum_probs=258.5

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+|+|+|+++|.|.+.++.|.++++|.+.....+   |     ++...   +..+....+              +-++
T Consensus         3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~---~-----~~~~~---~~~i~~~~~--------------~~~~   57 (348)
T PRK06147          3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETR---F-----IDPPG---GEWLIGAPV--------------PLPP   57 (348)
T ss_pred             CceEEEecceeecCcCCHHHHHHHHHcccccccccc---c-----ccCCC---CCceEeecC--------------cCCc
Confidence            579999999999999999999999999987664422   1     11100   000110000              1111


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcC-CCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAG-YNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAG-l~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      ......+..+|+..|+++||++++ +++.+     ++++++.+...-.        ..+.    ......+..++..+|+
T Consensus        58 ~~~~~~r~~~La~~Al~~aL~~a~~~~~~~-----i~lil~~~~~~~~--------~~~~----~~~~~~~~~~~~~lG~  120 (348)
T PRK06147         58 PWRGPERLAEMAAPAIAEALEGLPALDASE-----APLLLCVAEEERP--------GRPP----DLEERLLRELEARLGL  120 (348)
T ss_pred             ccCchHHHHHHHHHHHHHHHHhcccccccC-----CcEEEEeCchhcC--------CCCc----chHHHHHHHHHHHhCC
Confidence            122234677899999999999998 44443     4666664331100        0000    0111235567777777


Q ss_pred             --CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccce
Q psy11396        274 --QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV  351 (829)
Q Consensus       274 --~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGa  351 (829)
                        ++|+++|.++|+|+++||..|+++|++|++|.+||||+|.+..+..+..|...+.+..       +.+++|+++||||
T Consensus       121 ~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------~~~~~G~v~GEGA  193 (348)
T PRK06147        121 RLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------SQNSNGFIPGEAA  193 (348)
T ss_pred             CCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------CCCCCceeeeceE
Confidence              5789999999999999999999999999999999999999888877777777665542       1368999999999


Q ss_pred             EEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396        352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE  430 (829)
Q Consensus       352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E  430 (829)
                      +++||++.++|+++|++||+  .|++.+.++.+..... +++.++.++|++||+++|++|+|||||++|+|||+.+|..|
T Consensus       194 ~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e  271 (348)
T PRK06147        194 AAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEA  271 (348)
T ss_pred             EEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHH
Confidence            99999999999999999999  6777766664332222 36889999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396        431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW  510 (829)
Q Consensus       431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~  510 (829)
                      ..++.++|+...   ...++.+.|+.+||+++|+|+++++.++++|++|++|+.                          
T Consensus       272 ~~A~~~~f~~~~---~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~--------------------------  322 (348)
T PRK06147        272 ALAEMRLFRVRK---EFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP--------------------------  322 (348)
T ss_pred             HHHHHHHhhhcc---CCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC--------------------------
Confidence            999999998532   346799999999999999999999999999999999862                          


Q ss_pred             cccccCccEEEEeccCCCCceEEEEeee
Q psy11396        511 DIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                              +++|.|..-.|.-+++||+.
T Consensus       323 --------~~L~~s~~d~g~r~a~~l~~  342 (348)
T PRK06147        323 --------NVLCHLSDDDGARAALVLEY  342 (348)
T ss_pred             --------cEEEEecCCCCceEEEEEec
Confidence                    36778888888889999985

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.4e-39  Score=338.23  Aligned_cols=225  Identities=16%  Similarity=0.265  Sum_probs=199.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cc-cc-ccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SR-FT-DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~kp~Iaav  657 (829)
                      ..|++|.+|+.+|.++++.++  +++|+|||||.|++||+|+|++++....... .. .. ....+..+..+||||||+|
T Consensus        22 ~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav   99 (255)
T PRK08150         22 KRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRERDAGEGMHHSRRWHRVFDKIQYGRVPVIAAL   99 (255)
T ss_pred             cccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            358889999999999999987  7899999999999999999999875321110 00 00 1112333455999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||++|||||+|+|
T Consensus       100 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~  179 (255)
T PRK08150        100 HGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVP  179 (255)
T ss_pred             CCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEeeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      .+++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .+++.++++++|++|+.
T Consensus       180 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~~kr~  249 (255)
T PRK08150        180 AGEALDKAMELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQ-SAPEAKERLRAFLEKKA  249 (255)
T ss_pred             chHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999998877788899888888777777 78999999999999874

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.1e-39  Score=338.64  Aligned_cols=225  Identities=17%  Similarity=0.291  Sum_probs=200.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-cccc--ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRFT--DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~~--~~~~~~~~~~~~kp~Iaa  656 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... ..+.  ....+..+..+||||||+
T Consensus        27 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  106 (256)
T PRK06143         27 SLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAEAFISRLRDLCDAVRHFPVPVIAR  106 (256)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcChhhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            46889999999999999999999999999999998 7999999998864321110 0000  011233345599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|+ |+++++++|++++|+.++++++++|++++++||+++||||+|+
T Consensus       107 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv  185 (256)
T PRK06143        107 IPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVV  185 (256)
T ss_pred             ECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCcCeec
Confidence            999999999999999999999999999999999998 7788889999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |++++++++.+++++|+..+|.++..+|++++......+++.++.|...+...+ .++++++++++|++||
T Consensus       186 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~e~~~af~ekr  255 (256)
T PRK06143        186 PLAELDAAVERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAF-LTGEPQRHMAAFLNRK  255 (256)
T ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHh-cChHHHHHHHHHHhhc
Confidence            999999999999999999999999999999998877789999999999888888 7899999999999986

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.7e-39  Score=339.82  Aligned_cols=226  Identities=17%  Similarity=0.190  Sum_probs=202.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc---c-c--cccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF---T-D--EKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~---~-~--~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+++|.++++.++.|+++|+|||+|.|++||+|+|++++..........   . .  ...+..+..+||||||
T Consensus        26 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpvIa  105 (263)
T PRK07799         26 RNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLTKPLIA  105 (263)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccchhhhhhhhhhHHHHHHHHhcCCCCEEE
Confidence            58889999999999999999999999999999999999999999875432111000   0 0  0111223459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|
T Consensus       106 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~v  185 (263)
T PRK07799        106 AVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHV  185 (263)
T ss_pred             EECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .++++++++++|++|+.
T Consensus       186 v~~~~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~af~~~r~  257 (263)
T PRK07799        186 VPDGQALDKALELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVF-LSEDAKEGPRAFAEKRA  257 (263)
T ss_pred             cCcchHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHHccCC
Confidence            9999999999999999999999999999999998877789999999999888888 79999999999999763

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=100.00  E-value=5.7e-39  Score=339.00  Aligned_cols=226  Identities=16%  Similarity=0.243  Sum_probs=202.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-c-c----cccccccccCCCCEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-T-D----EKSYCMPLYCKIPVI  654 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~-~----~~~~~~~~~~~kp~I  654 (829)
                      ..|++|.+|+.+|.++++.++.|+ +|+|||+|.|++||+|+|++++.......... . .    ...+..+..+|||||
T Consensus        19 ~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI   97 (256)
T TIGR02280        19 KLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTPGGAPDLGRTIETFYNPLVRRLRALPLPVV   97 (256)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhccccchhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            468899999999999999999998 99999999999999999999875321110000 0 0    111223455999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++|||++
T Consensus        98 aav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~  177 (256)
T TIGR02280        98 CAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGLIWQ  177 (256)
T ss_pred             EEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++.++++.+|++|+.
T Consensus       178 vv~~~~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~  250 (256)
T TIGR02280       178 VVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELG-RSADYAEGVTAFLDKRN  250 (256)
T ss_pred             eeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999998888889999999999888888 79999999999999874

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.8e-39  Score=338.30  Aligned_cols=227  Identities=18%  Similarity=0.219  Sum_probs=199.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++...............+.....+||||||+|||
T Consensus        24 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G  103 (259)
T PRK06494         24 VMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRGWPESGFGGLTSRFDLDKPIIAAVNG  103 (259)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCcchhhhHHHHHHHHHhcCCCCEEEEECC
Confidence            35888999999999999999999999999999998 79999999988643211100001111122234699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+++|++
T Consensus       104 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~  183 (259)
T PRK06494        104 VAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVVPAG  183 (259)
T ss_pred             EEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHHHHHHcCCCcEecCHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHH--HHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE--LTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e--~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++++.+++++|+..+|.+++.+|+.++......+++.++.|  ...+...+ .+++++|++++|++|+.
T Consensus       184 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~~~d~~eg~~af~~kr~  253 (259)
T PRK06494        184 ELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARR-ASQDYIEGPKAFAEKRP  253 (259)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh-cCccHHHHHHHHHccCC
Confidence            9999999999999999999999999999988777888888888  44566666 78999999999999763

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.6e-39  Score=339.19  Aligned_cols=226  Identities=17%  Similarity=0.236  Sum_probs=201.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc-ccc--ccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS-RFT--DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~-~~~--~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++........ ...  ....+..+..+||||||+|
T Consensus        23 ~Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  102 (258)
T PRK09076         23 ANTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGDKAVAREMARRFGEAFEALSAFRGVSIAAI  102 (258)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcChhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            4889999999999999999999999999999998 78999999988643211100 000  0112333456999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++||||+|+|
T Consensus       103 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~  182 (258)
T PRK09076        103 NGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAATALRIGLVEEVVE  182 (258)
T ss_pred             CCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCceecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++|+.
T Consensus       183 ~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~eg~~af~~kr~  252 (258)
T PRK09076        183 KGEAREAALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLF-DTEDQREGVNAFLEKRA  252 (258)
T ss_pred             chhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence            99999999999999999999999999999998877789999999999998888 78999999999999763

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8e-39  Score=338.63  Aligned_cols=226  Identities=21%  Similarity=0.333  Sum_probs=202.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-ccccccccccCCCCEEEEeccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-DEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|++++........... ....+..+..+||||||+|||+
T Consensus        29 ~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  108 (261)
T PRK08138         29 RNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGAIEMYLRHTERYWEAIAQCPKPVIAAVNGY  108 (261)
T ss_pred             cCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhccchhHHHHHHHHHHHHHHHhCCCCEEEEEccE
Confidence            588899999999999999999999999999999999999999988653211110000 1112334456999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|+|+++
T Consensus       109 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~  188 (261)
T PRK08138        109 ALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVEDEQ  188 (261)
T ss_pred             EEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .++++++++++|++|+.
T Consensus       189 l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~i~af~~kr~  255 (261)
T PRK08138        189 TLPRALELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLF-DSEDQKEGMDAFLEKRK  255 (261)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999998877788999999999898888 79999999999999874

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.7e-39  Score=342.02  Aligned_cols=227  Identities=16%  Similarity=0.237  Sum_probs=202.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-------c--cccc-----cccccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-------I--SRFT-----DEKSYCMP  646 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-------~--~~~~-----~~~~~~~~  646 (829)
                      ..|++|.+|+.+|.++++++++|+++|+|||+|.|++||+|+|++++......       .  ....     ....+..+
T Consensus        26 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  105 (272)
T PRK06142         26 KGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRREILRLQAAINAV  105 (272)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccccchHHHHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999999999987532100       0  0000     01112334


Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      ..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||
T Consensus       106 ~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA  185 (272)
T PRK06142        106 ADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTGRDIDAAEA  185 (272)
T ss_pred             HhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhCCCcCHHHH
Confidence            45999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCcccccCh-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396        727 KERGISMPVLPR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD  805 (829)
Q Consensus       727 ~~~GLv~~v~~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~  805 (829)
                      +++||||+|+|+ +++++++.+++++|+..+|.+++.+|+.++......+++.+..+...+...+ .+++++|++.+|++
T Consensus       186 ~~~GLv~~vv~~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~egv~af~~  264 (272)
T PRK06142        186 EKIGLVNRVYDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAML-PSKDLTEAIAAHME  264 (272)
T ss_pred             HHcCCccEecCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHhc
Confidence            999999999995 8899999999999999999999999999998877789999999998888888 79999999999999


Q ss_pred             hcc
Q psy11396        806 KSI  808 (829)
Q Consensus       806 k~~  808 (829)
                      |+.
T Consensus       265 kr~  267 (272)
T PRK06142        265 KRP  267 (272)
T ss_pred             CCC
Confidence            884

>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated

Probab=100.00  E-value=1.1e-38  Score=339.45  Aligned_cols=227  Identities=16%  Similarity=0.251  Sum_probs=198.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-c----ccc--ccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-S----RFT--DEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~----~~~--~~~~~~~~~~~~kp~  653 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++....... .    ...  ....+..+..+||||
T Consensus        28 ~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  107 (275)
T PRK09120         28 KRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWRRLRWYQKPT  107 (275)
T ss_pred             cccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            468899999999999999999999999999999999999999998864311100 0    000  011233345599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|||+
T Consensus       108 IAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~A~eA~~~Glv~  187 (275)
T PRK09120        108 IAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVN  187 (275)
T ss_pred             EEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHHHHHhcCCccCHHHHHHcCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHH--HHhhhcCCh-HHHHHHHHHHhhcc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTM--HDYTFVNNP-SVITNIERYFDKSI  808 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~--~~~~~~~~~-~~~e~~~~~~~k~~  808 (829)
                      +|+|.+++++++.+++++|+..+|.+++.+|+.++......+.+.++.+...  ....+ .++ +++|++++|++|+.
T Consensus       188 ~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~d~~eg~~afl~kr~  264 (275)
T PRK09120        188 ESVPLAQLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSL-DPEGGREEGLKQFLDDKS  264 (275)
T ss_pred             eecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999998888888888877543  33446 566 89999999999886

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1e-38  Score=337.60  Aligned_cols=226  Identities=19%  Similarity=0.325  Sum_probs=203.2

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cc-c-ccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RF-T-DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|+++.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|++++........  .. . ....+..+..+||||||+|
T Consensus        22 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIAav  101 (257)
T PRK07658         22 ANALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVTEAEQATELAQLGQVTFERVEKFSKPVIAAI  101 (257)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccCchhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            488899999999999999999999999999999999999999988743221100  00 0 0112333456999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++||||+|+|
T Consensus       102 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~  181 (257)
T PRK07658        102 HGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNGVFP  181 (257)
T ss_pred             cCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCeecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++.+++++|++.+|.+++.+|++++......+++.++.|...+...+ .+++.++++.+|++|+.
T Consensus       182 ~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~egi~af~~kr~  251 (257)
T PRK07658        182 EETLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVF-TSEDAKEGVQAFLEKRK  251 (257)
T ss_pred             hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999998877789999999999999888 79999999999999863

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=100.00  E-value=8.9e-39  Score=340.64  Aligned_cols=227  Identities=19%  Similarity=0.218  Sum_probs=201.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc----c-----cccc----c-ccccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG----I-----SRFT----D-EKSYCMP  646 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~----~-----~~~~----~-~~~~~~~  646 (829)
                      ..|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......    .     ....    . ...+..+
T Consensus        28 ~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  107 (275)
T PLN02664         28 QRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRSGERLRRKIKFLQDAITAI  107 (275)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999999999887532110    0     0000    0 1112334


Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      ..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||
T Consensus       108 ~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA  187 (275)
T PLN02664        108 EQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTGRRFSGSEA  187 (275)
T ss_pred             HhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHH
Confidence            55999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCcccccCh-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396        727 KERGISMPVLPR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD  805 (829)
Q Consensus       727 ~~~GLv~~v~~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~  805 (829)
                      +++||||+|||+ +++.+.+.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .+++++|++++|++
T Consensus       188 ~~~GLv~~vv~~~~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~e  266 (275)
T PLN02664        188 KELGLVSRVFGSKEDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAML-VSDDLNEAVSAQIQ  266 (275)
T ss_pred             HHcCCCceeeCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc-cChhHHHHHHHHhc
Confidence            999999999994 8899999999999999999999999999998877789999999988888887 79999999999999


Q ss_pred             hcc
Q psy11396        806 KSI  808 (829)
Q Consensus       806 k~~  808 (829)
                      ||.
T Consensus       267 kr~  269 (275)
T PLN02664        267 KRK  269 (275)
T ss_pred             cCC
Confidence            873

>PRK07260 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-38  Score=335.03  Aligned_cols=226  Identities=16%  Similarity=0.202  Sum_probs=203.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--ccc-c----ccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRF-T----DEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~~-~----~~~~~~~~~~~~kp~  653 (829)
                      ..|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......  ... .    ....+..+..+||||
T Consensus        22 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  101 (255)
T PRK07260         22 VSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFAIKQLPKPV  101 (255)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHHHHHHHHHHHHHHHHcCCCCE
Confidence            358899999999999999999999999999999999999999999875321111  000 0    011223345599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|||+
T Consensus       102 Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~sa~eA~~~Glv~  181 (255)
T PRK07260        102 IMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVY  181 (255)
T ss_pred             EEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHHHHHhCCccCHHHHHHcCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +++|.+++.+++.+++++++..+|.+++.+|+.++......++..+..|...+...+ .++++++++++|++|+
T Consensus       182 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~kr  254 (255)
T PRK07260        182 RVAESEKLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLA-FKEDFKEGVRAFSERR  254 (255)
T ss_pred             eecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999888889999999988888888 7999999999999987

>PRK09245 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.5e-38  Score=337.93  Aligned_cols=226  Identities=22%  Similarity=0.385  Sum_probs=201.1

Q ss_pred             cCCccc-ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc----ccc----cc--ccccccccccCC
Q psy11396        582 KDLKNS-TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG----ISR----FT--DEKSYCMPLYCK  650 (829)
Q Consensus       582 ~n~~~~-~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~----~~~----~~--~~~~~~~~~~~~  650 (829)
                      .|++|. +|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++......    ...    +.  ....+..+..+|
T Consensus        24 ~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  103 (266)
T PRK09245         24 RNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRHGIQRIPLALYNLE  103 (266)
T ss_pred             ccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccchhHHHHHHHHHHHHHHHHHcCC
Confidence            577885 8999999999999999999999999999999999999987532110    000    00  011223344599


Q ss_pred             CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396        651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERG  730 (829)
Q Consensus       651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G  730 (829)
                      |||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++|
T Consensus       104 kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~G  183 (266)
T PRK09245        104 VPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEWG  183 (266)
T ss_pred             CCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCcCHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |||+|+|.+++++++.+++++|++.||.+++.+|++++......+++.+..|...+...+ .+++.++++++|++|+.
T Consensus       184 lv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~  260 (266)
T PRK09245        184 LVSRVVPADQLLPAARALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAH-HTADHREAVDAFLEKRP  260 (266)
T ss_pred             CcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHhHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999998877788888888888888888 78999999999999874

>PRK08139 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=1.6e-38  Score=336.76  Aligned_cols=226  Identities=14%  Similarity=0.210  Sum_probs=200.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--cc-cc-ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SR-FT-DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~-~~-~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++.......  .. +. ....+..+..+||||||+
T Consensus        31 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  110 (266)
T PRK08139         31 AFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAARGLAYFRALFARCSRVMQAIVALPQPVIAR  110 (266)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            458889999999999999999999999999999999999999998864321110  00 00 011223345699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|+++ .++|++++|..++++++++|++|+++||+++||||+|+
T Consensus       111 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv  189 (266)
T PRK08139        111 VHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAMEMLLTGEFIDAATAREWGLVNRVV  189 (266)
T ss_pred             ECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCccEee
Confidence            99999999999999999999999999999999999998765 56899999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++++.+.+++++|+..+|.+++.+|++++..+...+++.++.|...+...+ .++++++++++|++|+.
T Consensus       190 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~  260 (266)
T PRK08139        190 PADALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENM-MAEDAEEGIDAFLEKRP  260 (266)
T ss_pred             ChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999888889999999998888888 78999999999999864

>PRK06127 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-38  Score=337.35  Aligned_cols=227  Identities=16%  Similarity=0.238  Sum_probs=203.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc---cccc--cccccccccCCCCEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS---RFTD--EKSYCMPLYCKIPVI  654 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~---~~~~--~~~~~~~~~~~kp~I  654 (829)
                      ..|+++.+|+.+|.++++.+++|+++++|||+|.| ++||+|+|++.+........   .+..  ...+..+..+|||||
T Consensus        31 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI  110 (269)
T PRK06127         31 RHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESRSDAEAVAAYEQAVEAAQAALADYAKPTI  110 (269)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            56889999999999999999999999999999998 79999999988653211100   0000  112233456999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+
T Consensus       111 aav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~  190 (269)
T PRK06127        111 ACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAAEALRIGLVHR  190 (269)
T ss_pred             EEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|.+++++++++++++|+..+|.+++.+|++++..+...++..++.|...+...+ .+++.++++.+|++|+.
T Consensus       191 vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~af~ekr~  263 (269)
T PRK06127        191 VTAADDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACF-DSEDYREGRAAFMEKRK  263 (269)
T ss_pred             eeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cChHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999998888889999999988888888 79999999999999874

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-38  Score=336.24  Aligned_cols=227  Identities=21%  Similarity=0.305  Sum_probs=203.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc--cccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF--TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~--~~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|+++.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... ...  .....+..+..+||||||+
T Consensus        24 ~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa  103 (260)
T PRK07657         24 AANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSLIRTTMEMVEQLPQPVIAA  103 (260)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCChhhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            36888999999999999999999999999999998 5999999998864311110 000  0011233445699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+++
T Consensus       104 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv  183 (260)
T PRK07657        104 INGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEIGLVEFVV  183 (260)
T ss_pred             EcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++++++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++++++++++|++|+.
T Consensus       184 ~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~~r~  254 (260)
T PRK07657        184 PAHLLEEKAIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTI-PTKDRLEGLQAFKEKRK  254 (260)
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCHhHHHHHHHHhcCCC
Confidence            999999999999999999999999999999998887889999999999898888 79999999999999874

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.6e-38  Score=336.86  Aligned_cols=226  Identities=16%  Similarity=0.260  Sum_probs=201.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-ccc----ccc--cccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-ISR----FTD--EKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-~~~----~~~--~~~~~~~~~~~kp~  653 (829)
                      ..|++|.+|+.+|.+++++++ |+++|+|||+|.|++||+|+|++++...... ...    ...  ...+..+..+||||
T Consensus        24 ~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  102 (262)
T PRK08140         24 KLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRRLRALPLPV  102 (262)
T ss_pred             ccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHHHHHHHHHHHHHHHHhCCCCE
Confidence            358899999999999999999 9999999999999999999999886422100 000    000  11123344599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||
T Consensus       103 Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~  182 (262)
T PRK08140        103 IAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQAEQWGLIW  182 (262)
T ss_pred             EEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|+|.+++++++.+++++|+..+|.+++.+|+.++......++..++.|...+...+ .+++.++++.+|++|+.
T Consensus       183 ~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~kr~  256 (262)
T PRK08140        183 RVVDDAALADEAQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAG-RSADYAEGVSAFLEKRA  256 (262)
T ss_pred             EeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999998888889999999998888888 79999999999999874

>PRK06023 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.6e-38  Score=334.36  Aligned_cols=224  Identities=18%  Similarity=0.319  Sum_probs=198.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEEec
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaav~  658 (829)
                      +.|++|.+|+++|.++++.++.|+++|+|||+|.|++||+|.|++++.........+  .....+..+..+||||||+||
T Consensus        26 ~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~  105 (251)
T PRK06023         26 KKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSFGSEILDFLIALAEAEKPIVSGVD  105 (251)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccccchhhHHHHHHHHHHHHhCCCCEEEEeC
Confidence            368899999999999999999999999999999999999999999875422111111  111223344569999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|+.++++++++|++++++||+++|||++|+|.
T Consensus       106 G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~  185 (251)
T PRK06023        106 GLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEAAQEAGLIWKIVDE  185 (251)
T ss_pred             CceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHHHHHHHHhCCCCCHHHHHHcCCcceeeCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK  806 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k  806 (829)
                      +++++++.+++++|+..+|.+++.+|++++... ..++..++.|...+...+ .++++++++++|++|
T Consensus       186 ~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~-~~~~~~e~~~af~e~  251 (251)
T PRK06023        186 EAVEAETLKAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARL-KSAEARAAFEAFMRR  251 (251)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcC
Confidence            999999999999999999999999999998764 467888888888788888 799999999999984

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.3e-38  Score=337.83  Aligned_cols=226  Identities=18%  Similarity=0.249  Sum_probs=201.6

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc--cccc---ccc--cccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK--GISR---FTD--EKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~--~~~~---~~~--~~~~~~~~~~~kp~I  654 (829)
                      .|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.....  ....   +..  ...+..+..+|||||
T Consensus        38 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  117 (277)
T PRK08258         38 KNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVKAMRACPQPII  117 (277)
T ss_pred             ccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            488899999999999999999999999999999999999999988642111  0000   000  112334456999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccC-CCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP-GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p-~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      |+|||+|+|||++|+++|||||++++++|++||+++|++| ++|++++|++++|..++++++++|++++++||+++||||
T Consensus       118 AaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~  197 (277)
T PRK08258        118 AAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASELLYTGRSMSAEEGERWGFFN  197 (277)
T ss_pred             EEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCc
Confidence            9999999999999999999999999999999999999995 678899999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|+|.+++++++.+++++|+..+|.+++.+|+.++..+...+++.++.|...+...+ .++++++++++|++|+.
T Consensus       198 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~  271 (277)
T PRK08258        198 RLVEPEELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICM-QTEDFRRAYEAFVAKRK  271 (277)
T ss_pred             EecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999998888889999999999998888 79999999999999874

>PRK05995 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.2e-38  Score=334.65  Aligned_cols=226  Identities=17%  Similarity=0.248  Sum_probs=198.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc--ccccc----ccccccccccCCCCEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG--ISRFT----DEKSYCMPLYCKIPVI  654 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~--~~~~~----~~~~~~~~~~~~kp~I  654 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......  .....    ....+..+..+|||||
T Consensus        24 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  103 (262)
T PRK05995         24 VRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSDDENRADARRLADMLRAIYRCPKPVI  103 (262)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccCchhhhhHHHHHHHHHHHHHcCCCCEE
Confidence            46889999999999999999999999999999999999999999886432111  00000    0112233445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++|||||++++++|++||+++|++|++++. ++++++|+.++++++++|++|+++||+++||||+
T Consensus       104 aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~  182 (262)
T PRK05995        104 ARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISP-YVIRAMGERAARRYFLTAERFDAAEALRLGLVHE  182 (262)
T ss_pred             EEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHH-HHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCe
Confidence            999999999999999999999999999999999999999988765 5889999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHH-HHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTI-FLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|.+++.+++.+++++|+..+|.+++.+|+.++......+.+. ++.|...+...+ .++++++++++|++|+.
T Consensus       183 vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~af~~kr~  256 (262)
T PRK05995        183 VVPAEALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIR-ATEEAREGVAAFLEKRK  256 (262)
T ss_pred             ecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999998777777777 777777777777 78999999999999874

>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated

Probab=100.00  E-value=2.2e-38  Score=335.52  Aligned_cols=225  Identities=17%  Similarity=0.228  Sum_probs=194.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--ccc----cccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRF----TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~~----~~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.......  ...    .....+..+..+||||||
T Consensus        27 ~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa  106 (265)
T PRK05674         27 NNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADLDYNTNLDDARELAELMYNLYRLKIPTLA  106 (265)
T ss_pred             ccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcccccchhhhHHHHHHHHHHHHHHcCCCCEEE
Confidence            57789999999999999999999999999999999999999998864321100  000    011123334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++++. ++++++|..++++++++|+.|+++||+++|||++|
T Consensus       107 aV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~v  185 (265)
T PRK05674        107 VVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGERAARRYALTAERFDGRRARELGLLAES  185 (265)
T ss_pred             EEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHHHHHHHHHhCcccCHHHHHHCCCccee
Confidence            99999999999999999999999999999999999999987765 58899999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHH-HHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHEL-TMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|.+++.+++.+++++|+..+|.+++.+|+.++......+++.++.+. ..+...+ .+++.++++++|++|+.
T Consensus       186 v~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~-~s~d~~e~~~af~~kr~  258 (265)
T PRK05674        186 YPAAELEAQVEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIR-VSAEGQEGLRAFLEKRT  258 (265)
T ss_pred             cCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHh-cCHHHHHHHHHHHccCC
Confidence            999999999999999999999999999999999888777777776543 4555566 79999999999999873

>PRK03580 carnitinyl-CoA dehydratase; Provisional

Probab=100.00  E-value=3.3e-38  Score=333.95  Aligned_cols=226  Identities=18%  Similarity=0.304  Sum_probs=199.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEec
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav~  658 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.........+.  ....+..+..+||||||+||
T Consensus        23 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~  102 (261)
T PRK03580         23 ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVN  102 (261)
T ss_pred             ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCcchhhhhhhhhHHHHHHHhCCCCEEEEEC
Confidence            4888999999999999999999999999999998 79999999998653211111110  11122334559999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|||++|+|+
T Consensus       103 G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~  182 (261)
T PRK03580        103 GYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQ  182 (261)
T ss_pred             CeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEecCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHH----HHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELT----MHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +++++++.+++++|+..+|.+++.+|+.++......+++.++.|..    .+...+ .+++.++++++|++|+.
T Consensus       183 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~d~~e~~~af~ekr~  255 (261)
T PRK03580        183 AELMDRARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVL-HSEDALEGPRAFAEKRD  255 (261)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHh-cCccHHHHHHHHhcCCC
Confidence            9999999999999999999999999999998877788888887763    555666 79999999999999874

>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase)

Probab=100.00  E-value=2.2e-38  Score=334.67  Aligned_cols=225  Identities=18%  Similarity=0.228  Sum_probs=193.5

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhc-ccc---cccccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQK-GIS---RFTDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~-~~~---~~~~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..... ...   .......+..+..+||||||+
T Consensus        24 ~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  103 (259)
T TIGR01929        24 RNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYIDDSGVHRLNVLDVQRQIRTCPKPVIAM  103 (259)
T ss_pred             ccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccccchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence            4788999999999999999999999999999998 79999999987532110 000   000011223345599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|++++++||+++||||+|+
T Consensus       104 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv  183 (259)
T TIGR01929       104 VNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEQALDMGLVNTVV  183 (259)
T ss_pred             EcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHHHHHHcCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++.+++.+++++|+..+|.+++.+|++++..... .......|...+...+ .+++.++++++|++|+.
T Consensus       184 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~-~~~d~~egi~af~~kr~  253 (259)
T TIGR01929       184 PLADLEKETVRWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFY-MTEEGQEGRNAFLEKRQ  253 (259)
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHh-cCccHHHHHHHHhccCC
Confidence            9999999999999999999999999999999976543 3444445556666666 78999999999999874

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.1e-38  Score=334.36  Aligned_cols=226  Identities=20%  Similarity=0.327  Sum_probs=202.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cccc----cc-ccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GISR----FT-DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~~~----~~-~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||+|.|+.||+|+|++++..... ....    .. ....+..+..+||||||
T Consensus        24 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIA  103 (260)
T PRK07511         24 RNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPPSVQAASIDGLHDWIRAIRAFPKPVIA  103 (260)
T ss_pred             ccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcccccchhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            577899999999999999999999999999999999999999998753211 1000    00 01122334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|
T Consensus       104 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~v  183 (260)
T PRK07511        104 AVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGVVNRL  183 (260)
T ss_pred             EECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCccEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|++++.+++.++++++++.+|.++..+|+.++......+.+.+..|...+...+ .+++.++++++|++++.
T Consensus       184 v~~~~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~i~~f~~~r~  255 (260)
T PRK07511        184 AEPGQALAEALALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASL-HHADALEGIAAFLEKRA  255 (260)
T ss_pred             eCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhccCC
Confidence            9999999999999999999999999999999998888889999999999999999 79999999999999874

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=100.00  E-value=3.7e-38  Score=333.79  Aligned_cols=227  Identities=21%  Similarity=0.326  Sum_probs=203.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc-c-ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF-T-DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... ..+ . ....+..+..+||||||+
T Consensus        24 ~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa  103 (260)
T PRK05809         24 ALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLNEEEGRKFGLLGNKVFRKLENLDKPVIAA  103 (260)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccChHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence            35788999999999999999999999999999999 9999999998864321110 000 0 011233455699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|++++++||+++||||+|+
T Consensus       104 v~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv  183 (260)
T PRK05809        104 INGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAEEALRIGLVNKVV  183 (260)
T ss_pred             EcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |.+++.+.+.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .++++++++++|++|+.
T Consensus       184 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~egi~af~~~r~  254 (260)
T PRK05809        184 EPEKLMEEAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECF-STEDQTEGMTAFVEKRE  254 (260)
T ss_pred             ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999888889999999999999999 79999999999999874

>PRK07468 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.5e-38  Score=333.09  Aligned_cols=226  Identities=17%  Similarity=0.202  Sum_probs=198.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-c-ccc---cc-ccccccccccCCCCEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-G-ISR---FT-DEKSYCMPLYCKIPVI  654 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~-~~~---~~-~~~~~~~~~~~~kp~I  654 (829)
                      ..|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..... . ...   .. ....+..+..+|||||
T Consensus        25 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  104 (262)
T PRK07468         25 KHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTADRATRIEEARRLAMMLKALNDLPKPLI  104 (262)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhcccchhhHHHHHHHHHHHHHHHHcCCCCEE
Confidence            3588899999999999999999999999999999999999999998643111 1 000   00 0112233456999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ +.+++|..++++|+++|++++++||+++||||+
T Consensus       105 aav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~-~~~~vG~~~a~~lll~g~~~~a~eA~~~Glv~~  183 (262)
T PRK07468        105 GRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPY-VVARMGEANARRVFMSARLFDAEEAVRLGLLSR  183 (262)
T ss_pred             EEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhh-HHhhccHHHHHHHHHhCCccCHHHHHHcCCcce
Confidence            9999999999999999999999999999999999999999998887 446699999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|.+++++.+.+++++|++.+|.++..+|++++..+...+++.++.|...+...+ .++++++++++|++|+.
T Consensus       184 v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~e~~~af~~kr~  256 (262)
T PRK07468        184 VVPAERLDAAVEAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTW-ETEEAREGIAAFFDKRA  256 (262)
T ss_pred             ecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999998766667888899988888888 79999999999999884

>PRK05981 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.6e-38  Score=336.12  Aligned_cols=227  Identities=17%  Similarity=0.271  Sum_probs=202.2

Q ss_pred             ccCCcccccccccccchhhhccccc-ceeeeeeCCCCeeeccCChhhhhhhhccc----c---ccc--ccccccccccCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQ-YKVIIITGYENYFACGGTKEGLLKIQKGI----S---RFT--DEKSYCMPLYCK  650 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~-vr~vVl~g~g~~F~~G~D~~~~~~~~~~~----~---~~~--~~~~~~~~~~~~  650 (829)
                      ..|++|.+|+.+|.++++.++.|++ +|+|||+|.|++||+|+|++++.......    .   ...  ....+..+..+|
T Consensus        24 ~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  103 (266)
T PRK05981         24 VMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPFLRRLRNLP  103 (266)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence            5688999999999999999998764 99999999999999999999875321110    0   000  011223345699


Q ss_pred             CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396        651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERG  730 (829)
Q Consensus       651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G  730 (829)
                      |||||+|||+|+|||++|+++|||||++++++|++||.++|++|++|++++|++++|+.++++++++|++++++||+++|
T Consensus       104 kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~G  183 (266)
T PRK05981        104 CPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWG  183 (266)
T ss_pred             CCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcCHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ||++++|.+++++++.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .+++.+|++.+|++|+.
T Consensus       184 lv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~e~~~af~~kr~  260 (266)
T PRK05981        184 LVNRVVDDAELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAG-KTEDFKEGVGAFLQKRP  260 (266)
T ss_pred             CceEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999998877789999999998888888 79999999999999874

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.9e-38  Score=333.76  Aligned_cols=227  Identities=20%  Similarity=0.316  Sum_probs=204.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEEec
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaav~  658 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.........+  .....+..+..+||||||+||
T Consensus        25 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~  104 (259)
T PRK06688         25 KKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDELAPVNRFLRAIAALPKPVVAAVN  104 (259)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccCcchHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence            457889999999999999999999999999999999999999999875432211010  011223344559999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|+.++++++++|++|+++||+++||||+++|+
T Consensus       105 G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~  184 (259)
T PRK06688        105 GPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVVPA  184 (259)
T ss_pred             CeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHHHHHhCCccCHHHHHHcCCcceecCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +++.+++.+++++|+..+|.+++.+|+.++......+++.+..|...+...+ .+++.++++++|++|+.
T Consensus       185 ~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~af~~~~~  253 (259)
T PRK06688        185 AELDAEADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLL-RTPDFREGATAFIEKRK  253 (259)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999998888889999999999999988 78999999999999763

>PRK05870 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.6e-38  Score=330.47  Aligned_cols=223  Identities=17%  Similarity=0.294  Sum_probs=199.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-c-cc-ccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-R-FT-DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~kp~Iaav  657 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++........ . .. ....+..+..+||||||+|
T Consensus        23 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav  102 (249)
T PRK05870         23 RRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAEDGLRRIYDGFLAVASCPLPTIAAV  102 (249)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccccchHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            4688999999999999999999999999999999999999999998754221110 0 00 0112233445999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+++ 
T Consensus       103 ~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv-  181 (249)
T PRK05870        103 NGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLALMVA-  181 (249)
T ss_pred             CCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHHHHHHhCCccCHHHHHHcCCHHHHH-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK  806 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k  806 (829)
                       +++.+++.+++++|+..+|.+++.+|+.++.... ..+++.++.|...+...+ .+++++|++++|+++
T Consensus       182 -~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~eg~~af~~~  249 (249)
T PRK05870        182 -DDPVAAALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASV-QSPEFAARLAAAQRR  249 (249)
T ss_pred             -hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcC
Confidence             7899999999999999999999999999998877 788999999998888888 799999999999974

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.2e-38  Score=334.27  Aligned_cols=227  Identities=20%  Similarity=0.331  Sum_probs=202.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-------ccc------cccccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-------FTD------EKSYCMPL  647 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-------~~~------~~~~~~~~  647 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.........       +..      ...+..+.
T Consensus        26 ~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  105 (272)
T PRK06210         26 RLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDYQTRYHFLT  105 (272)
T ss_pred             cccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCcccccccccchhhhhhhhhhHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999987542211000       000      00122344


Q ss_pred             cCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+
T Consensus       106 ~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~  185 (272)
T PRK06210        106 ALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFYAEEAL  185 (272)
T ss_pred             hCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHHHHHHHHHcCCccCHHHHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKLSLL-SKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK  806 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k  806 (829)
                      ++||||+++|++++.+++.+++++|+.. +|.++..+|+.++......+++.++.|...+...+ .+++.+|++++|++|
T Consensus       186 ~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~af~~k  264 (272)
T PRK06210        186 RLGLVNRVVPPDELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESL-QRPDFIEGVASFLEK  264 (272)
T ss_pred             HcCCcceecCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHhcc
Confidence            9999999999999999999999999985 99999999999998877889999999998888888 789999999999998


Q ss_pred             cc
Q psy11396        807 SI  808 (829)
Q Consensus       807 ~~  808 (829)
                      +.
T Consensus       265 r~  266 (272)
T PRK06210        265 RP  266 (272)
T ss_pred             CC
Confidence            73

>PRK07396 dihydroxynaphthoic acid synthetase; Validated

Probab=100.00  E-value=5.3e-38  Score=334.06  Aligned_cols=226  Identities=19%  Similarity=0.233  Sum_probs=194.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhc-ccc---cccccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQK-GIS---RFTDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~-~~~---~~~~~~~~~~~~~~~kp~Ia  655 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... ...   .......+..+..+||||||
T Consensus        33 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA  112 (273)
T PRK07396         33 VRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGYVDDDGVPRLNVLDLQRLIRTCPKPVIA  112 (273)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccccchhhhhhhHHHHHHHHHHhCCCCEEE
Confidence            46889999999999999999999999999999998 69999999987642110 000   00001112234459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|..++++++++|++|+++||+++||||+|
T Consensus       113 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~eA~~~GLv~~v  192 (273)
T PRK07396        113 MVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQEALDMGLVNTV  192 (273)
T ss_pred             EECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHHHHHHcCCcCee
Confidence            99999999999999999999999999999999999999999989999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|++++++++.+++++|+..+|.+++.+|++++.... ..+...+.|...+...+ .+++++|+|.+|++|+.
T Consensus       193 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~-~~~d~~egi~af~~kr~  263 (273)
T PRK07396        193 VPLADLEKETVRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFY-MTEEAQEGRNAFNEKRQ  263 (273)
T ss_pred             cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHh-cChhHHHHHHHHhCCCC
Confidence            9999999999999999999999999999999987654 34444445666666666 78999999999999874

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.7e-38  Score=329.29  Aligned_cols=222  Identities=18%  Similarity=0.206  Sum_probs=196.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc----ccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT----DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++...........    ....+..+..+||||||+|
T Consensus        22 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav  101 (249)
T PRK07938         22 VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGFTALIDANRGCFAAFRAVYECAVPVIAAV  101 (249)
T ss_pred             cccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            488999999999999999999999999999999999999999988643211010000    0112334556999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++   +++++|++++|+.++++++++|++|+++||+++|||++|+|
T Consensus       102 ~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~  178 (249)
T PRK07938        102 HGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVP  178 (249)
T ss_pred             cCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeC
Confidence            999999999999999999999999999999999986   44568999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++++|++++|++||
T Consensus       179 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~eg~~af~ekr  247 (249)
T PRK07938        179 RDQLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELN-LAGVSDEHRDAFVEKR  247 (249)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHHhcC
Confidence            99999999999999999999999999999998777778888888888887777 7999999999999987

>PRK05864 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9.9e-38  Score=332.76  Aligned_cols=227  Identities=19%  Similarity=0.254  Sum_probs=194.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-----cc-ccc----ccccccccccCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-----IS-RFT----DEKSYCMPLYCK  650 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-----~~-~~~----~~~~~~~~~~~~  650 (829)
                      +.|++|.+|+.+|.++++++++|+++|+|||+|.|++||+|+|++++......     .. ...    ....+..+..+|
T Consensus        30 ~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  109 (276)
T PRK05864         30 RMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDVILALRRLH  109 (276)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhcccccccccchhHHHHHHHHHHHHHHHHHhCC
Confidence            46889999999999999999999999999999999999999999876421100     00 000    011123344599


Q ss_pred             CCEEEEecccccchhhhhhhccccccccccceeccccccccccC-CCcceeccccccCHHHHHHHHhcCCccCHHHHHHc
Q psy11396        651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP-GAGSTLIFPQRFGKILSREILFTASEFKGKELKER  729 (829)
Q Consensus       651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p-~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~  729 (829)
                      |||||+|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++++|+.++++++++|++++++||+++
T Consensus       110 kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~  189 (276)
T PRK05864        110 QPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERI  189 (276)
T ss_pred             CCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHc
Confidence            99999999999999999999999999999999999999999997 78889999999999999999999999999999999


Q ss_pred             CCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC-CHHHHHHHHHHHHH-hhhcCChHHHHHHHHHHhhc
Q psy11396        730 GISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK-KLSTIFLHELTMHD-YTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       730 GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~-~~~~~~~~e~~~~~-~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |||++|+|++++++++.+++++|+..+|.+++.+|+.++..... .+++.+..|..... ..+ .+++.++++++|++|+
T Consensus       190 Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~-~~~d~~e~~~af~~kr  268 (276)
T PRK05864        190 GLVSRQVPDEQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRL-LTANFEEAVAARAEKR  268 (276)
T ss_pred             CCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhc-cChhHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999876654 67777776654322 244 6899999999999987


Q ss_pred             c
Q psy11396        808 I  808 (829)
Q Consensus       808 ~  808 (829)
                      .
T Consensus       269 ~  269 (276)
T PRK05864        269 P  269 (276)
T ss_pred             C
Confidence            4

>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase

Probab=100.00  E-value=8.1e-38  Score=329.76  Aligned_cols=226  Identities=18%  Similarity=0.215  Sum_probs=190.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav  657 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...........  ....+..+..+||||||+|
T Consensus        22 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav  101 (256)
T TIGR03210        22 KMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYDGRGTIGLPMEELHSAIRDVPKPVIARV  101 (256)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhccccchhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            35788999999999999999999999999999998 79999999998742111110000  0112334456999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+|+||+++||||+|+|
T Consensus       102 ~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~~lll~g~~~~a~eA~~~Glv~~vv~  181 (256)
T TIGR03210       102 QGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWYLCRRYTAQEALAMGLVNAVVP  181 (256)
T ss_pred             CCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCceeeeC
Confidence            99999999999999999999999999999999999988888899999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      .+++.+++.+++++|+..+|.+++.+|++++.......... ..+...+...+ .+++.++++.+|++|+.
T Consensus       182 ~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~~~~~~~~-~~~d~~e~~~af~~kr~  250 (256)
T TIGR03210       182 HDQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIA-GMGMYALKLYY-DTAESREGVKAFQEKRK  250 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcccchHH-HHHHHHHHHHc-cChhHHHHHHHHhccCC
Confidence            99999999999999999999999999999987643321111 12334555566 78999999999999874

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.

>PRK07327 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9e-38  Score=331.67  Aligned_cols=222  Identities=18%  Similarity=0.335  Sum_probs=189.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc---c-cc-ccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS---R-FT-DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~---~-~~-~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|+++.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++........   . .. ....+..+..+||||||+
T Consensus        33 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  112 (268)
T PRK07327         33 LNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMADDFEVRARVWREARDLVYNVINCDKPIVSA  112 (268)
T ss_pred             cCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhccCcHHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence            588899999999999999999999999999999999999999987643211100   0 00 011223344699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++|||++++
T Consensus       113 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv  192 (268)
T PRK07327        113 IHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEEAERIGLVSLAV  192 (268)
T ss_pred             EcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC---CHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK---KLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++++++.+++++|++.+|.+++.+|++++.....   .++..+..+    ...+ .+++.++++.+|++|+.
T Consensus       193 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~----~~~~-~~~d~~eg~~af~ekr~  262 (268)
T PRK07327        193 DDDELLPKALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALE----FMGF-SGPDVREGLASLREKRA  262 (268)
T ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHH----HHHc-cChhHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999865321   233333332    2344 78999999999999874

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.1e-37  Score=329.72  Aligned_cols=225  Identities=15%  Similarity=0.239  Sum_probs=200.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cc-c-ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RF-T-DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|+++.+|+.+|.++++.+ +|+++|+||++|.|+.||+|+|++++........  .+ . ....+..+..+||||||+
T Consensus        26 ~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pvIaa  104 (260)
T PRK07659         26 ALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSNDESKFDGVMNTISEIVVTLYTMPKLTISA  104 (260)
T ss_pred             cccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhccCchhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            46889999999999999999 5889999999999999999999998753211110  00 0 011223344599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|+.++++||+++||||+++
T Consensus       105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv  184 (260)
T PRK07659        105 IHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLIDEVI  184 (260)
T ss_pred             ecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHHHHhCCccCHHHHHHcCChHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                       ++++.+++.+++++|++.+|.+++.+|+.++......+++.++.|...+...+ .+++.+|++.+|++|+.
T Consensus       185 -~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~af~~kr~  254 (260)
T PRK07659        185 -GGDFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMR-QTADHKEGIRAFLEKRL  254 (260)
T ss_pred             -hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHhHHHHHHHHhcCCC
Confidence             78899999999999999999999999999998877889999999999888888 78999999999999874

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=100.00  E-value=1.1e-37  Score=327.23  Aligned_cols=222  Identities=44%  Similarity=0.802  Sum_probs=200.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|+.++.........+.....+..+..+||||||+|||+|
T Consensus        26 ~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a  105 (249)
T PRK07110         26 KNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGKGTFTEANLYSLALNCPIPVIAAMQGHA  105 (249)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhccchhhhHhhHHHHHHHHcCCCCEEEEecCce
Confidence            58899999999999999999999999999999999999999998875432221111112233445569999999999999


Q ss_pred             cchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH
Q psy11396        662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV  741 (829)
Q Consensus       662 ~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l  741 (829)
                      +|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++|||++|+|++++
T Consensus       106 ~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l  185 (249)
T PRK07110        106 IGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLLTARYYRGAELKKRGVPFPVLPRAEV  185 (249)
T ss_pred             echHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCeEEeChHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396        742 LFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF  804 (829)
Q Consensus       742 ~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  804 (829)
                      .+++.+++++|++.++.+++.+|+.++......+++.++.|...+...+ .+++.+|+|.++-
T Consensus       186 ~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~~~~  247 (249)
T PRK07110        186 LEKALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTF-HQPEVKRRIESLY  247 (249)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHh-CCHhHHHHHHHhc
Confidence            9999999999999999999999999999988899999999999999999 7999999998763

>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix

Probab=100.00  E-value=4.4e-38  Score=330.87  Aligned_cols=225  Identities=25%  Similarity=0.426  Sum_probs=204.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---ccccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---FTDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~kp~Iaav  657 (829)
                      ..|++|.+++.+|.++++.++.|+++++||++|.+++||+|.|+.++.........   ......+..+..+||||||+|
T Consensus        18 ~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kp~Iaav   97 (245)
T PF00378_consen   18 KRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNSDEEEAREFFRRFQELLSRLANFPKPTIAAV   97 (245)
T ss_dssp             GTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhccccccccccchhhccccccchhhhhheeecc
Confidence            57889999999999999999999999999999999999999999888765111111   111223344455999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|+++++++|+|++|+.++++++++|++|+++||+++||||+|+|
T Consensus        98 ~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~  177 (245)
T PF00378_consen   98 NGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLTGEPISAEEALELGLVDEVVP  177 (245)
T ss_dssp             SSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCEEEHHHHHHTTSSSEEES
T ss_pred             cccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecccccccccccccchhHHHHhhcceeEEcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK  806 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k  806 (829)
                      ++++.+++.+++++++..++.+++.+|+.++......+++.++.+...+...+ .+++++|++++|+||
T Consensus       178 ~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~f~eK  245 (245)
T PF00378_consen  178 DEELDEEALELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECF-KSEDFQEGIAAFLEK  245 (245)
T ss_dssp             GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTT
T ss_pred             chhhhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc-CCHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999988889999999999999999 899999999999997

Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....

>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase

Probab=100.00  E-value=1.8e-37  Score=325.60  Aligned_cols=222  Identities=13%  Similarity=0.256  Sum_probs=188.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-ccccccccccCCCCEEEEeccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-DEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|.|+.++..... ..... ....+..+..+||||||+|||+
T Consensus        21 ~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~-~~~~~~~~~~~~~l~~~~kPvIaav~G~   99 (251)
T TIGR03189        21 ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMPDQC-AAMLASLHKLVIAMLDSPVPILVAVRGQ   99 (251)
T ss_pred             cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCchhH-HHHHHHHHHHHHHHHhCCCCEEEEecCe
Confidence            588999999999999999999999999999999999999999987532110 00010 1112334556999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|++ ++++|++++|..++++++++|++++++||+++|||++|+|+.+
T Consensus       100 a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~  178 (251)
T TIGR03189       100 CLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPE  178 (251)
T ss_pred             eeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceecCcHH
Confidence            999999999999999999999999999999999874 5778999999999999999999999999999999999998543


Q ss_pred             HHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHH-HHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKL-AKKLSLLSKKELELQKKYYSHSLQKKLSTIFL-HELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~-a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                        +++.++ +++|+..+|.+++.+|++++..+...+++.+. .|...+...+ .+++.+|++++|++|+.
T Consensus       179 --~~a~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~  245 (251)
T TIGR03189       179 --NAALAWFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELM-ATHDAVEGLNAFLEKRP  245 (251)
T ss_pred             --HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHh-CCHhHHHHHHHHHhcCC
Confidence              456665 69999999999999999999887777776653 5666667777 79999999999999884

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.

>PRK06144 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.2e-37  Score=329.51  Aligned_cols=223  Identities=16%  Similarity=0.235  Sum_probs=192.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc--ccc--ccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS--RFT--DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~--~~~--~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+++|.++++++++|+++|+|||+|.| ++||+|+|++++........  .+.  ....+..+..+||||||
T Consensus        28 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa  107 (262)
T PRK06144         28 ARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFSTAEDAVAYERRIDRVLGALEQLRVPTIA  107 (262)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            35888999999999999999999999999999998 79999999988653211110  000  11122334459999999


Q ss_pred             Eecccccchhhhhhhccccccccccceecccccc-ccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR-YGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~-~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      +|||+|+|||++|+++|||||++++++|++||++ +|++|++|++++|++++|+.++++++++|++|+++||+++||||+
T Consensus       108 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~  187 (262)
T PRK06144        108 AIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEAEEALAAGLVNE  187 (262)
T ss_pred             EECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCe
Confidence            9999999999999999999999999999999997 999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|++++++++++++++|+..+|.+++.+|+.++......+    +.+...+...+ .++++++++.+|++|+.
T Consensus       188 vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~-~~~~~~e~~~af~~kr~  256 (262)
T PRK06144        188 VVEDAALDARADALAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCY-MSEDFREGVEAFLEKRP  256 (262)
T ss_pred             ecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHh-cChHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999987654433    33445666666 79999999999999874

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-37  Score=327.58  Aligned_cols=223  Identities=21%  Similarity=0.337  Sum_probs=197.6

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-c----ccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-T----DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~----~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.......... .    ....+..+..+||||||+
T Consensus        24 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  103 (257)
T PRK06495         24 VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGPGDLRAHNRRTRECFHAIRECAKPVIAA  103 (257)
T ss_pred             cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhccCCchhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            47889999999999999999999999999999999999999998864321110000 0    011223345699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|+.   ++++++++++|+.++++++++|++++++||+++||||+++
T Consensus       104 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~GLv~~vv  180 (257)
T PRK06495        104 VNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRVPAAELYRRGVIEACL  180 (257)
T ss_pred             ECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHHHHHcCCeeCHHHHHHcCCcceec
Confidence            9999999999999999999999999999999999996   4467799999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++++++++++|++|+.
T Consensus       181 ~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~egi~af~~kr~  251 (257)
T PRK06495        181 PPEELMPEAMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLA-KTEDAKEAQRAFLEKRP  251 (257)
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChHHHHHHHHHhccCC
Confidence            999999999999999999999999999999998877889999999988888888 79999999999999874

>PRK08260 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2e-37  Score=333.49  Aligned_cols=227  Identities=18%  Similarity=0.196  Sum_probs=194.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-c-------------ccc-c-cc----c
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-G-------------ISR-F-TD----E  640 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~-------------~~~-~-~~----~  640 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++..... .             ... . ..    .
T Consensus        24 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (296)
T PRK08260         24 KLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGG  103 (296)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccccccccccccchhHHHHHHHHH
Confidence            4588899999999999999999999999999999999999999988642100 0             000 0 00    0


Q ss_pred             ccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCc
Q psy11396        641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASE  720 (829)
Q Consensus       641 ~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~  720 (829)
                      ..+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|..++++++++|++
T Consensus       104 ~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~  183 (296)
T PRK08260        104 RVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWVYSGRV  183 (296)
T ss_pred             HHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHHHHHHHHHcCCc
Confidence            12233445999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhhC-CHHHHHHHHHHHHHhhhcCChHHHH
Q psy11396        721 FKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL-SKKELELQKKYYSHSLQK-KLSTIFLHELTMHDYTFVNNPSVIT  798 (829)
Q Consensus       721 ~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~~~K~~l~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~e  798 (829)
                      |+++||+++||||+|+|++++.+++.+++++|+.. +|.+++.+|++++..+.. ........|...+...+ .+++++|
T Consensus       184 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e  262 (296)
T PRK08260        184 FDAQEALDGGLVRSVHPPDELLPAARALAREIADNTSPVSVALTRQMMWRMAGADHPMEAHRVDSRAIYSRG-RSGDGKE  262 (296)
T ss_pred             cCHHHHHHCCCceeecCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHc-cChhHHH
Confidence            99999999999999999999999999999999985 999999999999977532 12233355666666666 7999999


Q ss_pred             HHHHHHhhcc
Q psy11396        799 NIERYFDKSI  808 (829)
Q Consensus       799 ~~~~~~~k~~  808 (829)
                      ++.+|++|+.
T Consensus       263 gi~af~~kr~  272 (296)
T PRK08260        263 GVSSFLEKRP  272 (296)
T ss_pred             HHHHHhcCCC
Confidence            9999999885

>PLN02921 naphthoate synthase

Probab=100.00  E-value=2.3e-37  Score=334.24  Aligned_cols=226  Identities=18%  Similarity=0.182  Sum_probs=192.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcc-cccc---cccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKG-ISRF---TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~-~~~~---~~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++.+...... ....   ........+..+||||||
T Consensus        87 ~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA  166 (327)
T PLN02921         87 RRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGYVGPDDAGRLNVLDLQIQIRRLPKPVIA  166 (327)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccccchhHHHHHHHHHHHHHHHhCCCCEEE
Confidence            35889999999999999999999999999999998 799999999876421100 0000   001112334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|.++++++|++++|..++++++++|+.|+|+||+++||||+|
T Consensus       167 aVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A~ellltG~~~~A~eA~~~GLV~~v  246 (327)
T PLN02921        167 MVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFYTASEALKMGLVNTV  246 (327)
T ss_pred             EECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|.+++++++.+++++|+..+|.+++.+|++++..... .......+...+...+ .+++++|++++|++|+.
T Consensus       247 v~~~~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~-~s~d~~egi~Af~ekr~  317 (327)
T PLN02921        247 VPLDELEGETVKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFY-GSEEGNEGRTAYLEGRA  317 (327)
T ss_pred             eCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHh-cCHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999876543 3333333345556666 79999999999999874

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.6e-37  Score=322.50  Aligned_cols=223  Identities=18%  Similarity=0.187  Sum_probs=196.0

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      ..|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++...............+..+..+||||||+|||+
T Consensus        20 ~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~   99 (248)
T PRK06072         20 KLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDFAIDLRETFYPIIREIRFSDKIYISAINGV   99 (248)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            46889999999999999999999999999999999999999999876432110000001112233445999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|++|+++++++++|. ++++++++|++|+++||+++||||++   ++
T Consensus       100 a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~-~a~~lll~g~~~~a~eA~~~Glv~~~---~~  175 (248)
T PRK06072        100 TAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQ-RFYEILVLGGEFTAEEAERWGLLKIS---ED  175 (248)
T ss_pred             eehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhH-HHHHHHHhCCccCHHHHHHCCCcccc---ch
Confidence            999999999999999999999999999999999999999999999996 89999999999999999999999964   46


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +.+++.+++++|+..||.+++.+|++++......+++.++.|...+...+ .+++.++++++|++|+.
T Consensus       176 ~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~  242 (248)
T PRK06072        176 PLSDAEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLG-KTEDFKEGISSFKEKRE  242 (248)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHh-CChhHHHHHHHHhcCCC
Confidence            78899999999999999999999999998877888999999998888888 79999999999999874

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional

Probab=100.00  E-value=4.2e-37  Score=324.99  Aligned_cols=226  Identities=16%  Similarity=0.236  Sum_probs=195.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCC--CCeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY--ENYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~--g~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.+++|+ +|+|||+|.  |++||+|+|++++.........+  .....+..+..+||||||+
T Consensus        24 ~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa  102 (261)
T PRK11423         24 KRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGRDPLSYDDPLRQILRMIQKFPKPVIAM  102 (261)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhccccHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            358889999999999999999887 999999996  38999999998864321111010  0111233345599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++++++++++++|+.++++++++|++++++||+++||||+|+
T Consensus       103 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~GLv~~vv  182 (261)
T PRK11423        103 VEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVV  182 (261)
T ss_pred             EecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCHHHHHHcCCcCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCH-HHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKL-STIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~-~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++++++.+++++|+..+|.+++.+|+.++.... ... +..++.+...+...+ .+++.++++.+|++|+.
T Consensus       183 ~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~d~~eg~~af~~kr~  255 (261)
T PRK11423        183 EVEELEDFTLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVY-DSEDYQEGMNAFLEKRK  255 (261)
T ss_pred             CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHh-CChhHHHHHHHHhccCC
Confidence            999999999999999999999999999999986543 233 567777777778888 79999999999999874

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.6e-37  Score=325.30  Aligned_cols=224  Identities=17%  Similarity=0.218  Sum_probs=198.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cccc-c--------cccccccccCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SRFT-D--------EKSYCMPLYCK  650 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~~~-~--------~~~~~~~~~~~  650 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++.+....... .... .        ...+..+..+|
T Consensus        23 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (262)
T PRK07509         23 KMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPGNAVKLLFKRLPGNANLAQRVSLGWRRLP  102 (262)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhcccchhhhhHhhhhHHHHHHHHHHHHHHHhCC
Confidence            568899999999999999999999999999999999999999998875321110 0000 0        00111234599


Q ss_pred             CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396        651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERG  730 (829)
Q Consensus       651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G  730 (829)
                      |||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|
T Consensus       103 kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~ltg~~~~a~eA~~~G  182 (262)
T PRK07509        103 VPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVFSAEEALELG  182 (262)
T ss_pred             CCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |||++++  ++.+++.+++++|+..+|.++..+|++++..+...+.+.+..|...+...+ .++++++++.+|++|+
T Consensus       183 lv~~vv~--~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~af~ekr  256 (262)
T PRK07509        183 LVTHVSD--DPLAAALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLL-LGKNQKIAVKAQMKKR  256 (262)
T ss_pred             Chhhhhc--hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCC
Confidence            9999995  467899999999999999999999999999888888899999988888888 7999999999999986

>PRK06190 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.7e-37  Score=322.10  Aligned_cols=227  Identities=18%  Similarity=0.234  Sum_probs=197.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......... ......+..+..+|||+||+|||
T Consensus        24 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  103 (258)
T PRK06190         24 ARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAYGAQDALPNPSPAWPAMRKPVIGAING  103 (258)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhhHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            35889999999999999999999999999999999999999999987532111100 01111223345599999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+++|++
T Consensus       104 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  183 (258)
T PRK06190        104 AAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGLVTEVVPHD  183 (258)
T ss_pred             EeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCeEecCHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcC--ChHHHHHHHHHHhhc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVN--NPSVITNIERYFDKS  807 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~~e~~~~~~~k~  807 (829)
                      ++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+.+  .....+..++|+.+.
T Consensus       184 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~~~~~~~~~~~~~~~~~  253 (258)
T PRK06190        184 ELLPRARRLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNRSVSPDGIAARREAVMARG  253 (258)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999888888999999999999888843  145566666666544

>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

Probab=100.00  E-value=1.2e-36  Score=321.73  Aligned_cols=223  Identities=22%  Similarity=0.374  Sum_probs=198.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhh---hhccccccc-ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLK---IQKGISRFT-DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~---~~~~~~~~~-~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++.+..   ......... ....+..+..+||||||+
T Consensus        25 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  104 (257)
T COG1024          25 KLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRALADLPKPVIAA  104 (257)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhcccchhHHHHHHhHHHHHHHHHHhCCCCEEEE
Confidence            3589999999999999999999999999999999999999999999764   111110000 112344566699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+.+++++++||+.|+++||+++|||++++
T Consensus       105 v~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv  184 (257)
T COG1024         105 VNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDEVV  184 (257)
T ss_pred             EcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHcCCcCeee
Confidence            99999999999999999999999999999999999999889999999999999999999999999999999999999999


Q ss_pred             Ch-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396        737 PR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD  805 (829)
Q Consensus       737 ~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~  805 (829)
                      +. +++.+.+++++++++. +|.++..+|+.++......+++....+...+...+ .+++++|++++|++
T Consensus       185 ~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~eg~~a~~~  252 (257)
T COG1024         185 PDAEELLERALELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLF-SSEDFREGVRAFLE  252 (257)
T ss_pred             CCHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHh-cChhHHHHHHHHHc
Confidence            85 7999999999999998 99999999999998877668888888888888866 78999999999999

>PRK08321 naphthoate synthase; Validated

Probab=100.00  E-value=1.2e-36  Score=327.65  Aligned_cols=226  Identities=17%  Similarity=0.235  Sum_probs=193.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-------CeeeccCChhhhhhhh----c-c--c--c--ccccc--
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-------NYFACGGTKEGLLKIQ----K-G--I--S--RFTDE--  640 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-------~~F~~G~D~~~~~~~~----~-~--~--~--~~~~~--  640 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|       ++||+|+|++.+....    . .  .  .  .....  
T Consensus        45 ~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (302)
T PRK08321         45 VRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHI  124 (302)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccccccccccccccchhhhHHHHHHH
Confidence            35888999999999999999999999999999998       5999999998653110    0 0  0  0  00000  


Q ss_pred             -ccccccccCCCCEEEEecccccchhhhhhhcccccccc-ccceeccccccccccCCCcceeccccccCHHHHHHHHhcC
Q psy11396        641 -KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFS-EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTA  718 (829)
Q Consensus       641 -~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~-~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g  718 (829)
                       .....+..+||||||+|||+|+|||++|+++|||||++ ++++|++||+++|++|+++++++|++++|..++++++++|
T Consensus       125 ~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG  204 (302)
T PRK08321        125 LEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLG  204 (302)
T ss_pred             HHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcC
Confidence             01122345999999999999999999999999999999 6899999999999999999999999999999999999999


Q ss_pred             CccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHH
Q psy11396        719 SEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVIT  798 (829)
Q Consensus       719 ~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e  798 (829)
                      ++++|+||+++|||+++||.+++++++.+++++|+..++.+++.+|++++.... ........|...+...+ .+++.++
T Consensus       205 ~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~-~~~d~~e  282 (302)
T PRK08321        205 RTYSAEEAHDMGAVNAVVPHAELETEALEWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAY-MTDEAQE  282 (302)
T ss_pred             CccCHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHh-cCHHHHH
Confidence            999999999999999999999999999999999999999999999999987654 34444556777777777 7999999


Q ss_pred             HHHHHHhhcc
Q psy11396        799 NIERYFDKSI  808 (829)
Q Consensus       799 ~~~~~~~k~~  808 (829)
                      ++.+|++|+.
T Consensus       283 gi~af~ekr~  292 (302)
T PRK08321        283 GRDAFLEKRD  292 (302)
T ss_pred             HHHHHhccCC
Confidence            9999999874

>PRK07854 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.6e-36  Score=317.24  Aligned_cols=218  Identities=17%  Similarity=0.251  Sum_probs=190.0

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      ..|++|.+|+.+|.+++++++++ ++|+|||||.|++||+|+|++........  .......+..+..+||||||+|||+
T Consensus        20 ~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~--~~~~~~~~~~l~~~~kP~Iaav~G~   96 (243)
T PRK07854         20 RRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVYADDF--PDALIEMLHAIDAAPVPVIAAINGP   96 (243)
T ss_pred             cccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchhHHHH--HHHHHHHHHHHHhCCCCEEEEecCc
Confidence            46889999999999999999865 89999999999999999999752111000  0001112333446999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++|||++|++   
T Consensus        97 a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~---  173 (243)
T PRK07854         97 AIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKLTAEQALATGMANRIGT---  173 (243)
T ss_pred             ccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCcccccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999975   


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +. ++.+++++|+..+|.++..+|+.++..  ..+++.++.|...+...+ .+++.++++.+|++|+.
T Consensus       174 ~~-~a~~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~  237 (243)
T PRK07854        174 LA-DAQAWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAW-ASQDAIEAQVARIEKRP  237 (243)
T ss_pred             HH-HHHHHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhCCCC
Confidence            33 789999999999999999999999875  568888888988888888 78999999999999874

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.4e-36  Score=319.76  Aligned_cols=223  Identities=15%  Similarity=0.135  Sum_probs=196.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc----cc-c-ccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS----RF-T-DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~----~~-~-~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++........    .+ . ....+..+..+||||||
T Consensus        27 ~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa  106 (260)
T PRK07827         27 RNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGDPYDAAVARAREMTALLRAIVELPKPVIA  106 (260)
T ss_pred             cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcccCchhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            488899999999999999999999999999999999999999998653211100    00 0 01122334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++++++++++++ ..++++++++|++++++||+++|||+++
T Consensus       107 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~-~~~a~~l~l~g~~~~a~eA~~~Glv~~v  185 (260)
T PRK07827        107 AIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLS-PRAAARYYLTGEKFGAAEAARIGLVTAA  185 (260)
T ss_pred             EEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhh-HHHHHHHHHhCCccCHHHHHHcCCcccc
Confidence            999999999999999999999999999999999999999999999998875 5699999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +  +++++.+.+++++|+..++.++..+|++++..+...++..++.+...+...+ .+++.++++++|++|+.
T Consensus       186 ~--~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~af~~kr~  255 (260)
T PRK07827        186 A--DDVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLF-VSDEAREGMTAFLQKRP  255 (260)
T ss_pred             h--HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCCC
Confidence            7  4689999999999999999999999999999888889999999988888888 78999999999999873

>PRK12478 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.5e-36  Score=323.09  Aligned_cols=223  Identities=17%  Similarity=0.228  Sum_probs=190.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhh-hhh---hh--cc----cccc----cc----ccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEG-LLK---IQ--KG----ISRF----TD----EKS  642 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~-~~~---~~--~~----~~~~----~~----~~~  642 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|+++ +..   ..  ..    ...+    ..    ...
T Consensus        25 ~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (298)
T PRK12478         25 QLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQK  104 (298)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccccCchhhhhhhhhhhcchHHH
Confidence            3588899999999999999999999999999999999999999975 211   00  00    0000    00    011


Q ss_pred             ccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccc-cccCCCcceeccccccCHHHHHHHHhcCCcc
Q psy11396        643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY-GFTPGAGSTLIFPQRFGKILSREILFTASEF  721 (829)
Q Consensus       643 ~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~-Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~  721 (829)
                      +..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++ |+++  ++.  +.+++|+.++++++++|++|
T Consensus       105 ~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~--~~~~vG~~~A~~llltg~~i  180 (298)
T PRK12478        105 FMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGM--WLYRLSLAKVKWHSLTGRPL  180 (298)
T ss_pred             HHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhH--HHHHhhHHHHHHHHHcCCcc
Confidence            223445999999999999999999999999999999999999999997 8875  223  23679999999999999999


Q ss_pred             CHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhhhcCChHHH---
Q psy11396        722 KGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKLSTIFLHELTMHDYTFVNNPSVI---  797 (829)
Q Consensus       722 ~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~---  797 (829)
                      +|+||+++||||+|||++++++++.+++++|+..+|.+++.+|++++.... ..+++.+..|...+...+ .+++.+   
T Consensus       181 ~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~e~~  259 (298)
T PRK12478        181 TGVQAAEAELINEAVPFERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMR-NTPDALEFI  259 (298)
T ss_pred             CHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHh-cChhHHHHH
Confidence            999999999999999999999999999999999999999999999998776 458999999999988888 688886   


Q ss_pred             -----HHHHHHHhhcc
Q psy11396        798 -----TNIERYFDKSI  808 (829)
Q Consensus       798 -----e~~~~~~~k~~  808 (829)
                           |++.+|++||.
T Consensus       260 ~~~~~egv~Af~ekR~  275 (298)
T PRK12478        260 RTAETQGVRAAVERRD  275 (298)
T ss_pred             HHHHHHHHHHHHHhcC
Confidence                 59999999984

>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional

Probab=100.00  E-value=4.2e-36  Score=328.00  Aligned_cols=224  Identities=17%  Similarity=0.239  Sum_probs=197.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc--cc----cccccccccCCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF--TD----EKSYCMPLYCKIP  652 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~--~~----~~~~~~~~~~~kp  652 (829)
                      +.|+++.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... ...  ..    ......+..+|||
T Consensus        23 ~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP  102 (342)
T PRK05617         23 ALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAADRFFREEYRLNALIARYPKP  102 (342)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhHHHHHHHHHHHHHHHHhCCCC
Confidence            35888999999999999999999999999999998 9999999999865321110 000  00    1122334459999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      |||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++| .++++++++|+.|+++||+++|||
T Consensus       103 vIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g-~~a~~llltG~~i~A~eA~~~GLv  181 (342)
T PRK05617        103 YIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG-ALGTYLALTGARISAADALYAGLA  181 (342)
T ss_pred             EEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc-HHHHHHHHcCCCCCHHHHHHcCCc
Confidence            9999999999999999999999999999999999999999999999999999877 789999999999999999999999


Q ss_pred             ccccChhhHHHH--------------------------------------------------------------HHHHHH
Q psy11396        733 MPVLPRKQVLFY--------------------------------------------------------------SLKLAK  750 (829)
Q Consensus       733 ~~v~~~~~l~~~--------------------------------------------------------------~~~~a~  750 (829)
                      ++++|++++++.                                                              +.++++
T Consensus       182 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~  261 (342)
T PRK05617        182 DHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTAD  261 (342)
T ss_pred             ceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHH
Confidence            999999988876                                                              889999


Q ss_pred             HHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH-hh
Q psy11396        751 KLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF-DK  806 (829)
Q Consensus       751 ~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~-~k  806 (829)
                      +|++.+|.+++.+|++++.....++++.++.|...+...+ .++++++++++|+ +|
T Consensus       262 ~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~egv~afl~ek  317 (342)
T PRK05617        262 TLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAML-RSPDFVEGVRAVLIDK  317 (342)
T ss_pred             HHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-hCCchhhccceEEEcC
Confidence            9999999999999999998877889999999999999888 6889999999997 65

>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=100.00  E-value=9.5e-36  Score=313.82  Aligned_cols=219  Identities=14%  Similarity=0.172  Sum_probs=188.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-c--cc--ccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-R--FT--DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~--~~--~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++++++  ++|+||++|.|++||+|+|++++........ .  ..  ....+..+..+||||||+
T Consensus        25 ~Nal~~~~~~~L~~~l~~~~~--~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa  102 (255)
T PRK07112         25 QNTINDRLIAECMDVLDRCEH--AATIVVLEGLPEVFCFGADFSAIAEKPDAGRADLIDAEPLYDLWHRLATGPYVTIAH  102 (255)
T ss_pred             cCCCCHHHHHHHHHHHHHhhc--CceEEEEEcCCCCcccCcCHHHHhhccccchhhhhhHHHHHHHHHHHHcCCCCEEEE
Confidence            588999999999999999983  6999999999999999999998754221110 0  00  011233445599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|+++ ..+|++++|+.++++++++|++++++||++|||||+|+
T Consensus       103 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv  181 (255)
T PRK07112        103 VRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHYMTLMTQPVTAQQAFSWGLVDAYG  181 (255)
T ss_pred             EecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCCceec
Confidence            99999999999999999999999999999999999999765 46799999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |.++.  .+.+++++|+..+|.+++.+|++++.. ...+.+.++.|.......+ .++++++++++|++|+
T Consensus       182 ~~~~~--~~~~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~-~~~~~~eg~~af~~kr  248 (255)
T PRK07112        182 ANSDT--LLRKHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMF-ADPENLRKIARYVETG  248 (255)
T ss_pred             CcHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHH-cChHHHHHHHHHHcCC
Confidence            86653  578899999999999999999999865 4567888888888888888 7999999999999986

>KOG0016|consensus

Probab=100.00  E-value=1.1e-34  Score=287.70  Aligned_cols=229  Identities=21%  Similarity=0.298  Sum_probs=208.9

Q ss_pred             cccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccccccc----------ccccccC
Q psy11396        580 ISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKS----------YCMPLYC  649 (829)
Q Consensus       580 l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~----------~~~~~~~  649 (829)
                      -..|+++.+++.++..++..+.+|+++..+|++|.|++||+|.|+..+...............          ......+
T Consensus        27 kk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~~v~~fi~f  106 (266)
T KOG0016|consen   27 KKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEESDKASKFVKNVSCFVNTFINF  106 (266)
T ss_pred             cccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCcccccchhhHHHHHHHHHHHHHHhcC
Confidence            346788889999999999999999999999999999999999999888765554433332222          1223349


Q ss_pred             CCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHc
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKER  729 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~  729 (829)
                      |||+||.|||||+|.|+.+...||+|+++|+++|..|++++|..|++|+++++|++||...|.||++.|++++|+||++.
T Consensus       107 ~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~~~A~E~ll~~~kltA~Ea~~~  186 (266)
T KOG0016|consen  107 PKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGSASANEMLLFGEKLTAQEACEK  186 (266)
T ss_pred             CCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhchhhHHHHHHhCCcccHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccc
Q psy11396        730 GISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIK  809 (829)
Q Consensus       730 GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~  809 (829)
                      |||+++++.+.+.+.++..+++++..+|.+++..|++++......+..+.++|+......| .++++.++|.+|+.+..|
T Consensus       187 glVskif~~~tf~~~v~~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W-~s~e~~~~~~~~~~~~~k  265 (266)
T KOG0016|consen  187 GLVSKIFPAETFNEEVLKKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQW-VSAECLARFKQYLSKKRK  265 (266)
T ss_pred             CchhhhcChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhc-cChHHHHHHHHHhccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999 799999999999998754

>PRK08788 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=5.3e-35  Score=310.24  Aligned_cols=227  Identities=14%  Similarity=0.156  Sum_probs=192.0

Q ss_pred             cCCcccccccccccchhhhcc-----cccceeeeeeCC-CCeeeccCChhhhhhhhc--ccccc-cc----ccccccc--
Q psy11396        582 KDLKNSTVVKGITDAFSYINS-----SVQYKVIIITGY-ENYFACGGTKEGLLKIQK--GISRF-TD----EKSYCMP--  646 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~-----d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~--~~~~~-~~----~~~~~~~--  646 (829)
                      .|++|.+|+.+|.+++++++.     |+++|+|||+|. |++||+|+|++++.....  ..... ..    ...+..+  
T Consensus        37 ~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  116 (287)
T PRK08788         37 RPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAGDRDALLAYARACVDGVHAFHR  116 (287)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccccchHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999998     899999999999 899999999988643111  00000 00    0011111  


Q ss_pred             -ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        647 -LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       647 -~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                       +.+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++|
T Consensus       117 ~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~~A~ellltG~~l~A~e  196 (287)
T PRK08788        117 GFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELILSGKLYTAEE  196 (287)
T ss_pred             hcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHHHHHHHHHcCCCCCHHH
Confidence             1589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396        726 LKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD  805 (829)
Q Consensus       726 A~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~  805 (829)
                      |++|||||+++|++++.+++.+++++|+.. |.+...+|+.++......+++.++.+..++..++.....-.+-|++|.+
T Consensus       197 A~~~GLV~~vv~~~el~~~a~~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (287)
T PRK08788        197 LHDMGLVDVLVEDGQGEAAVRTFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQLEEKDLRTMERLVR  275 (287)
T ss_pred             HHHCCCCcEecCchHHHHHHHHHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence            999999999999999999999999999986 6666777776666556678888888888888777677788899999987


Q ss_pred             hccc
Q psy11396        806 KSIK  809 (829)
Q Consensus       806 k~~~  809 (829)
                      ...+
T Consensus       276 ~~~~  279 (287)
T PRK08788        276 AQNR  279 (287)
T ss_pred             HHhh
Confidence            6643

>PRK05869 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=2.3e-35  Score=303.70  Aligned_cols=190  Identities=16%  Similarity=0.219  Sum_probs=170.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--ccc-ccccccccccCCCCEEEEec
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFT-DEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~~-~~~~~~~~~~~~kp~Iaav~  658 (829)
                      .|++|.+|+.+|.++++++++|+++|+||+||.|++||+|+|++++........  ... ....+..+..+||||||+||
T Consensus        28 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~  107 (222)
T PRK05869         28 TNALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSAQEADTAARVRQQAVDAVAAIPKPTVAAIT  107 (222)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence            488999999999999999999999999999999999999999998753211110  000 11223345569999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+++|.
T Consensus       108 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~  187 (222)
T PRK05869        108 GYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEEALALGLIDEMVAP  187 (222)
T ss_pred             CEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSL  771 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~  771 (829)
                      +++++++.+++++|+..+|.+++.+|++++..+
T Consensus       188 ~~l~~~a~~~a~~ia~~~~~a~~~~K~~~~~~~  220 (222)
T PRK05869        188 DDVYDAAAAWARRFLDGPPHALAAAKAGISDVY  220 (222)
T ss_pred             hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999998764

>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=2.9e-35  Score=324.98  Aligned_cols=226  Identities=17%  Similarity=0.239  Sum_probs=194.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccc----cccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTD----EKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~----~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|..+++.++.|+++|+|||+|.|++||+|+|++++......... ...    ......+..+|||+||
T Consensus        31 ~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIA  110 (379)
T PLN02874         31 QLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRESDDSCLEVVYRMYWLCYHIHTYKKTQVA  110 (379)
T ss_pred             cccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhcccchHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            35888999999999999999999999999999999999999999987432111100 000    0112234459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. +++++++||++|+++||+++|||+++
T Consensus       111 aV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~-~a~~l~ltG~~i~a~eA~~~GLv~~v  189 (379)
T PLN02874        111 LVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGH-LGEYLALTGARLNGKEMVACGLATHF  189 (379)
T ss_pred             EecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHH-HHHHHHHcCCcccHHHHHHcCCccEE
Confidence            99999999999999999999999999999999999999999999999999885 89999999999999999999999999


Q ss_pred             cChhhHHH---H----------------------------------------------------------------HHHH
Q psy11396        736 LPRKQVLF---Y----------------------------------------------------------------SLKL  748 (829)
Q Consensus       736 ~~~~~l~~---~----------------------------------------------------------------~~~~  748 (829)
                      ||++++.+   +                                                                +.++
T Consensus       190 v~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A~~~  269 (379)
T PLN02874        190 VPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWIKET  269 (379)
T ss_pred             eCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHHHHH
Confidence            99888865   2                                                                2378


Q ss_pred             HHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhc--CChHHHHHHHHHH-hhc
Q psy11396        749 AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFV--NNPSVITNIERYF-DKS  807 (829)
Q Consensus       749 a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~e~~~~~~-~k~  807 (829)
                      +++|++.+|.+++.+|++++.....++++.++.|.......+.  .+++++|++++|+ +|+
T Consensus       270 a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~  331 (379)
T PLN02874        270 LKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKD  331 (379)
T ss_pred             HHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCC
Confidence            9999999999999999999988777899999999888777763  2789999999997 773

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=100.00  E-value=1.4e-34  Score=329.01  Aligned_cols=225  Identities=9%  Similarity=0.064  Sum_probs=199.0

Q ss_pred             cCCcccccccccccchhhhc-ccccceeeeeeCCCCe-eeccCChhhhhhhhcc-c-cc-cc-ccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYIN-SSVQYKVIIITGYENY-FACGGTKEGLLKIQKG-I-SR-FT-DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~-~d~~vr~vVl~g~g~~-F~~G~D~~~~~~~~~~-~-~~-~~-~~~~~~~~~~~~kp~Ia  655 (829)
                      .|+++.+|+.+|.+++.+++ +|+++|+|||||.|+. ||+|+|+..+. ..+. . .. .. ....+..+..+|||+||
T Consensus       292 ~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kpviA  370 (546)
T TIGR03222       292 ANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLEA-HKDHWFVRETIGYLRRTLARLDVSSRSLFA  370 (546)
T ss_pred             cCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCccccc-cccchhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            48899999999999999998 4599999999999987 99999997421 1110 0 01 00 01123344559999999


Q ss_pred             Ee-cccccchh-hhhhhccccccc-------cccceeccccccccccCCCcceecccccc-CHHHH--HHHHhcCCccCH
Q psy11396        656 AM-QGHAIGAG-WAMGLFCDYTIF-------SEESVYQSPYMRYGFTPGAGSTLIFPQRF-GKILS--REILFTASEFKG  723 (829)
Q Consensus       656 av-~G~a~GgG-~~lal~cD~~ia-------~~~a~f~~~e~~~Gl~p~~g~~~~l~r~i-G~~~a--~e~ll~g~~~~a  723 (829)
                      +| ||+|+||| ++|+++||+||+       +++++|++||+++|++|++|++++|++++ |.+++  ++++++|++|+|
T Consensus       371 av~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A  450 (546)
T TIGR03222       371 LIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDA  450 (546)
T ss_pred             EECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCH
Confidence            99 89999999 999999999999       89999999999999999999999999998 99999  569999999999


Q ss_pred             HHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHH-HHHHHHHHHhhhcCChHHHH---H
Q psy11396        724 KELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTI-FLHELTMHDYTFVNNPSVIT---N  799 (829)
Q Consensus       724 ~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~e---~  799 (829)
                      +||++||||++++|++++.+++.+++++|+..+|.+++.+|+.++.....+++.. +..|..++...+ .+++.+|   +
T Consensus       451 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~g  529 (546)
T TIGR03222       451 EEAERLGLVTAAPDDIDWEDEIRIALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIF-NRPNAVGENGA  529 (546)
T ss_pred             HHHHHcCCcccccCchHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHh-cCCcccchhhH
Confidence            9999999999999999999999999999999999999999999999888889999 999999999999 6889999   9


Q ss_pred             HHHHHhhcc
Q psy11396        800 IERYFDKSI  808 (829)
Q Consensus       800 ~~~~~~k~~  808 (829)
                      +++|+|||+
T Consensus       530 ~~af~ekr~  538 (546)
T TIGR03222       530 LKVYGSGKK  538 (546)
T ss_pred             HHHHccCCC
Confidence            999999984

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=100.00  E-value=2.2e-34  Score=328.92  Aligned_cols=247  Identities=9%  Similarity=0.050  Sum_probs=206.9

Q ss_pred             EEeccccchhhHHHH--HHHHhhhcccCCcccccccccccchhhhcc-cccceeeeeeCCC-CeeeccCChhhhhhhhcc
Q psy11396        558 VFPLSAKNLSQLLIY--AKLICNYISKDLKNSTVVKGITDAFSYINS-SVQYKVIIITGYE-NYFACGGTKEGLLKIQKG  633 (829)
Q Consensus       558 ll~~Sa~~~~~L~~~--~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~-d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~  633 (829)
                      +.++.-++|+.++..  .+.  -+-.-|+++.+|+.+|.++++.++. |+++|+|||||.| +.||+|+|++... ....
T Consensus       272 va~itlnrP~~~Na~~~~~~--~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~-~~~~  348 (550)
T PRK08184        272 TATITVKAPTAAQPADIAGI--VAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLA-HKDH  348 (550)
T ss_pred             EEEEEEeCcccccccccccc--cccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhc-ccch
Confidence            344555566554321  111  1234588999999999999999986 7999999999999 4999999976321 1110


Q ss_pred             -c-cc-cc-ccccccccccCCCCEEEEec-ccccchh-hhhhhcccccccc-------ccceeccccccccccCCCccee
Q psy11396        634 -I-SR-FT-DEKSYCMPLYCKIPVIAAMQ-GHAIGAG-WAMGLFCDYTIFS-------EESVYQSPYMRYGFTPGAGSTL  700 (829)
Q Consensus       634 -~-~~-~~-~~~~~~~~~~~~kp~Iaav~-G~a~GgG-~~lal~cD~~ia~-------~~a~f~~~e~~~Gl~p~~g~~~  700 (829)
                       . .. .. ....+..+..+||||||+|| |+|+||| ++|+++||+||++       ++++|++||+++|++|++|+++
T Consensus       349 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~  428 (550)
T PRK08184        349 WLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLS  428 (550)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHH
Confidence             0 00 00 01122334459999999997 9999999 9999999999999       9999999999999999999999


Q ss_pred             ccccc-cCHHHHHHH--HhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHH
Q psy11396        701 IFPQR-FGKILSREI--LFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLST  777 (829)
Q Consensus       701 ~l~r~-iG~~~a~e~--ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~  777 (829)
                      +|+++ +|..+++++  +++|++|+++||++|||||+++|++++++++.+++++|+..+|.+++.+|++++.....+++.
T Consensus       429 ~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~  508 (550)
T PRK08184        429 RLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRIALEERASLSPDALTGMEANLRFAGPETMET  508 (550)
T ss_pred             HhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCHHH
Confidence            99998 699999997  589999999999999999999999999999999999999999999999999999998889999


Q ss_pred             H-HHHHHHHHHhhhcCChHHHH---HHHHHHhhcc
Q psy11396        778 I-FLHELTMHDYTFVNNPSVIT---NIERYFDKSI  808 (829)
Q Consensus       778 ~-~~~e~~~~~~~~~~~~~~~e---~~~~~~~k~~  808 (829)
                      . +..|..++..++ .+++.+|   ++++|+|||+
T Consensus       509 ~~~~~e~~~~~~~~-~~~d~~e~~~g~~af~ekr~  542 (550)
T PRK08184        509 RIFGRLTAWQNWIF-QRPNAVGEKGALKVYGTGQK  542 (550)
T ss_pred             HHHHHHHHHHHHHh-cCCcccccchHHHHhccCCC
Confidence            9 999999999999 6889999   9999999985

>PRK08290 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.2e-34  Score=304.44  Aligned_cols=212  Identities=21%  Similarity=0.355  Sum_probs=181.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-----------------c--c-ccc---
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-----------------I--S-RFT---  638 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-----------------~--~-~~~---  638 (829)
                      .|+++.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......                 .  . ...   
T Consensus        25 ~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (288)
T PRK08290         25 RNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREW  104 (288)
T ss_pred             cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccccccccccccccccchhhHHHHHH
Confidence            5888999999999999999999999999999999999999999876321110                 0  0 000   


Q ss_pred             --ccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHh
Q psy11396        639 --DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILF  716 (829)
Q Consensus       639 --~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll  716 (829)
                        ....+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ |+ .+.+++++++|+.+++++++
T Consensus       105 ~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG~~~A~~lll  182 (288)
T PRK08290        105 EVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELGPRKAKELLF  182 (288)
T ss_pred             HHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhhHHHHHHHHH
Confidence              001112344599999999999999999999999999999999999999999999 43 34567889999999999999


Q ss_pred             cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC-CHHHHHHHHHHHHHhhhcCChH
Q psy11396        717 TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK-KLSTIFLHELTMHDYTFVNNPS  795 (829)
Q Consensus       717 ~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~-~~~~~~~~e~~~~~~~~~~~~~  795 (829)
                      ||+.|+++||+++||||+++|.+++++++.+++++|+..++.+++.+|++++..+.. .++..+..|.......+.++++
T Consensus       183 tG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (288)
T PRK08290        183 TGDRLTADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGHAHNAE  262 (288)
T ss_pred             cCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHccccchh
Confidence            999999999999999999999999999999999999999999999999999988765 5888888888888877756665

>KOG1679|consensus

Probab=100.00  E-value=8.7e-35  Score=277.20  Aligned_cols=229  Identities=19%  Similarity=0.290  Sum_probs=201.2

Q ss_pred             hcccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhcc-ccccc--ccccccccccCCCCEE
Q psy11396        579 YISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKG-ISRFT--DEKSYCMPLYCKIPVI  654 (829)
Q Consensus       579 ~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~-~~~~~--~~~~~~~~~~~~kp~I  654 (829)
                      .-.+|.++.-|+++|.++++.+.+|+.+|+|++.+. +..||+|.|+++-...+.. ...|.  .+..+..+-.+|.|||
T Consensus        49 pa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms~~Ev~~fV~~lR~~~~dIe~Lp~P~I  128 (291)
T KOG1679|consen   49 PAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMSPSEVTRFVNGLRGLFNDIERLPQPVI  128 (291)
T ss_pred             hhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCCHHHHHHHHHHHHHHHHHHHhCCccce
Confidence            345778888899999999999999999999999987 7899999999885432221 11111  1223344445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|.|.|.|||++|+++||+|+++++++|+++|++++++|+.|++++|+|.+|.+.++|++||++.+++.||...||||+
T Consensus       129 AAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~alaKELIftarvl~g~eA~~lGlVnh  208 (291)
T KOG1679|consen  129 AAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVALAKELIFTARVLNGAEAAKLGLVNH  208 (291)
T ss_pred             ehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHHHHHhHhhhheeccchhHHhcchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChh----hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRK----QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~----~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|...    ...+++.+++++|...-|.++++.|..++.....++...+..|..-+.... ...+..|++.+|.+||.
T Consensus       209 vv~qneegdaa~~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i-~t~drLeglaaf~ekr~  285 (291)
T KOG1679|consen  209 VVEQNEEGDAAYQKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQII-PTKDRLEGLAAFKEKRK  285 (291)
T ss_pred             HHhcCccccHHHHHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcC-cHHHHHHHHHHHHhhcC
Confidence            99754    677889999999999999999999999999999888889888887777777 67899999999999884

>PRK08272 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9.3e-34  Score=305.97  Aligned_cols=190  Identities=16%  Similarity=0.250  Sum_probs=164.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc---c-c--------------cc----
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI---S-R--------------FT----  638 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~---~-~--------------~~----  638 (829)
                      +.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++.......   . .              ..    
T Consensus        30 ~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (302)
T PRK08272         30 KGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMID  109 (302)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhcccccccccccccccccccccccccccchhh
Confidence            458899999999999999999999999999999999999999999875422110   0 0              00    


Q ss_pred             ------ccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHH
Q psy11396        639 ------DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR  712 (829)
Q Consensus       639 ------~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~  712 (829)
                            ....+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|.+|+.   .++++++|+.+|+
T Consensus       110 ~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~~vG~~~A~  186 (302)
T PRK08272        110 YQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAYRLGPQRAK  186 (302)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHHHhhHHHHH
Confidence                  0011223445999999999999999999999999999999999999999998555543   2578899999999


Q ss_pred             HHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC
Q psy11396        713 EILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK  773 (829)
Q Consensus       713 e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~  773 (829)
                      ++++||++|+++||+++||||+++|++++++++.+++++|+..||.+++.+|+.++..+..
T Consensus       187 ~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~~~~  247 (302)
T PRK08272        187 RLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERLVERIAAVPVNQLAMVKLAVNSALLQ  247 (302)
T ss_pred             HHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999987754

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=7.4e-34  Score=312.65  Aligned_cols=220  Identities=15%  Similarity=0.222  Sum_probs=188.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--c----cccc-cccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--S----RFTD-EKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~----~~~~-~~~~~~~~~~~kp~  653 (829)
                      +.|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|+.++.......  .    .+.. ......+..+|||+
T Consensus        57 ~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pkPv  136 (401)
T PLN02157         57 ALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYLLGTYLKPH  136 (401)
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            357789999999999999999999999999999999999999999875322110  0    0000 01122244599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++++||++++++||+++|||+
T Consensus       137 IA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~-~a~~L~LTG~~i~A~eA~~~GLv~  215 (401)
T PLN02157        137 VAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGR-LGEYLGLTGLKLSGAEMLACGLAT  215 (401)
T ss_pred             EEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhH-HHHHHHHcCCcCCHHHHHHcCCce
Confidence            9999999999999999999999999999999999999999999999999999995 899999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF  804 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  804 (829)
                      ++||.+++ +++.+++.+++..+|.++..+|+.++.. .......+..+...+..++ .++++.|++++|.
T Consensus       216 ~vVp~~~l-~~~~~~~~~i~~~~p~av~~~k~~~~~~-~~~~~~~l~~~~~~i~~~f-~~~d~~ei~~al~  283 (401)
T PLN02157        216 HYIRSEEI-PVMEEQLKKLLTDDPSVVESCLEKCAEV-AHPEKTGVIRRIDLLEKCF-SHDTVEEIIDSLE  283 (401)
T ss_pred             EEeCHhHH-HHHHHHHHHHHcCCHHHHHHHHHHHhcc-cCCcchhHHHHHHHHHHHh-cCCCHHHHHHHHH
Confidence            99999998 6778999999999999999999999765 2334456666777788888 6889999999994

>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

Probab=100.00  E-value=2.3e-33  Score=298.74  Aligned_cols=223  Identities=21%  Similarity=0.239  Sum_probs=179.9

Q ss_pred             ceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceee
Q psy11396        530 TNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVI  609 (829)
Q Consensus       530 ~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~v  609 (829)
                      ...+++.|.-|...+.    -+..+..|+..+.-++++.             .|++|.+|+.+|.++++.++.|+++++|
T Consensus        14 ~~~~~~~~~~~~~~~~----~~~~~~~~~A~ItLNRP~k-------------~NAls~~ml~eL~~al~~~~~D~dVrvV   76 (360)
T TIGR03200        14 VCPGVLYEKRPAKRPD----GNVVPGLYNAWIILDNPKQ-------------YNSYTTDMVKAIILAFRRASSDRDVVAV   76 (360)
T ss_pred             cCCceeeecCCCCCCC----CCccCceEEEEEEECCCCc-------------cCCCCHHHHHHHHHHHHHHhhCCCceEE
Confidence            3445666665533221    1223567877777777664             5678999999999999999999999999


Q ss_pred             eeeCCC-CeeeccCChhhhhhhhcccc----ccc--ccccccccccCCCCEEEEecccccchhhhhhhccccccccccce
Q psy11396        610 IITGYE-NYFACGGTKEGLLKIQKGIS----RFT--DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESV  682 (829)
Q Consensus       610 Vl~g~g-~~F~~G~D~~~~~~~~~~~~----~~~--~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~  682 (829)
                      ||||.| ++||+|+|++++........    ...  ....+..+..+||||||+|||+|+|||++|+++||+||++++++
T Consensus        77 VLTG~G~kaFCAG~DLke~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~  156 (360)
T TIGR03200        77 VFTAVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLAN  156 (360)
T ss_pred             EEEcCCCCcccCCcCHHHHhhhcccChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCE
Confidence            999999 69999999998754221100    000  01122334559999999999999999999999999999999999


Q ss_pred             eccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH------------HHHHHHHHH
Q psy11396        683 YQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV------------LFYSLKLAK  750 (829)
Q Consensus       683 f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l------------~~~~~~~a~  750 (829)
                      |++||+++|++|++|++++|++++|..++++++++|++|+|+||+++|||++|+|+.++            ++.+.++++
T Consensus       157 Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~  236 (360)
T TIGR03200       157 FGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSAHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGR  236 (360)
T ss_pred             EeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcHHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhH
Confidence            99999999999999999999999999999999999999999999999999999998887            777777777


Q ss_pred             HHhcCCHH--HHHHHHHHHHh
Q psy11396        751 KLSLLSKK--ELELQKKYYSH  769 (829)
Q Consensus       751 ~i~~~~~~--a~~~~K~~l~~  769 (829)
                      .+...++.  +++..|.+++.
T Consensus       237 ~~~~~~~~~~~~~~~k~~~~~  257 (360)
T TIGR03200       237 IVHGEFKAGDELKAGKELIKQ  257 (360)
T ss_pred             HhcCCCcchhHHHHHHHHHhc
Confidence            77777666  67777777765

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06213 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.5e-34  Score=295.38  Aligned_cols=202  Identities=18%  Similarity=0.145  Sum_probs=174.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEec
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav~  658 (829)
                      ..|+++.+|+.+|.++++.++  +++++||++|.|++||+|.|++++.........+.  ....+..+..+||||||+||
T Consensus        22 ~~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~   99 (229)
T PRK06213         22 KVNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSGAQAAIALLTAGSTLARRLLSHPKPVIVACT   99 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcchHhHHHHHHHHHHHHHHHHcCCCCEEEEEc
Confidence            358899999999999999988  45799999999999999999988753211111110  11223344569999999999


Q ss_pred             ccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      |+|+|||++|+++|||||++++ ++|++||+++|++|+.++..++++++|...+++++++|++++++||+++||||+|+|
T Consensus       100 G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~Glv~~vv~  179 (229)
T PRK06213        100 GHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQRAVINAEMFDPEEAVAAGFLDEVVP  179 (229)
T ss_pred             CeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHHHHHcCcccCHHHHHHCCCceeccC
Confidence            9999999999999999999999 999999999999888888888899999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHH
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELT  784 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~  784 (829)
                      ++++.+++.++++++++.++.+++.+|++++......+++.++.|..
T Consensus       180 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~  226 (229)
T PRK06213        180 PEQLLARAQAAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAA  226 (229)
T ss_pred             hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhh
Confidence            99999999999999999999999999999998776666766666654

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=100.00  E-value=3.6e-33  Score=332.49  Aligned_cols=229  Identities=15%  Similarity=0.192  Sum_probs=197.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc----cccc--ccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI----SRFT--DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~----~~~~--~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.......    ..+.  ....+..+..+||||||
T Consensus        28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA  107 (715)
T PRK11730         28 VNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAAPEEELSQWLHFANSIFNRLEDLPVPTVA  107 (715)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhccCCHHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            57889999999999999999999999999999999999999998875321100    0010  01122334559999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|++++++|++++|+||+++||||+|
T Consensus       108 av~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~llltG~~~~A~eA~~~GLv~~v  187 (715)
T PRK11730        108 AINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAEDALKVGAVDAV  187 (715)
T ss_pred             EECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCCeEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcC------------CHH---------HHHHHHH------------------HHHhhhhCCHH
Q psy11396        736 LPRKQVLFYSLKLAKKLSLL------------SKK---------ELELQKK------------------YYSHSLQKKLS  776 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~------------~~~---------a~~~~K~------------------~l~~~~~~~~~  776 (829)
                      +|++++++++.+++++|+..            +|.         +++.+|+                  +++.....+++
T Consensus       188 v~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~a~~~~~~~~~~~~~k~~~~~~~~~~~pa~~~~~~~i~~~~~~~~~  267 (715)
T PRK11730        188 VAPEKLQEAALALLKQAIAGKLDWKARRQPKLEPLKLSKIEAMMSFTTAKGMVAQKAGKHYPAPMTAVKTIEAAAGLGRD  267 (715)
T ss_pred             cCHHHHHHHHHHHHHHHhhcCCccccccCcccccccccchhHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHhcCCHH
Confidence            99999999999999999865            344         3466664                  56777777899


Q ss_pred             HHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccC
Q psy11396        777 TIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKN  811 (829)
Q Consensus       777 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~  811 (829)
                      +.++.|...+..++ .+++.++++.+|++++..|+
T Consensus       268 ~~l~~E~~~~~~~~-~s~d~~egi~aF~~~~~~~~  301 (715)
T PRK11730        268 EALELEAKGFVKLA-KTNVARALVGIFLNDQYVKG  301 (715)
T ss_pred             HHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcC
Confidence            99999999999999 79999999999998866433

>KOG1681|consensus

Probab=99.97  E-value=2.3e-33  Score=270.19  Aligned_cols=240  Identities=20%  Similarity=0.302  Sum_probs=207.9

Q ss_pred             ceeEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc--
Q psy11396        555 IFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK--  632 (829)
Q Consensus       555 ~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~--  632 (829)
                      .|+++-++-++|+-+             |++|..||.|+-++|+.+.+||++|+|||+|+|+.||+|.|+..+.....  
T Consensus        29 ~~~V~hv~lnRPsk~-------------Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~   95 (292)
T KOG1681|consen   29 QPFVYHVQLNRPSKL-------------NALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQ   95 (292)
T ss_pred             CCeEEEEEecCcchh-------------hhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccc
Confidence            366777777777665             45688899999999999999999999999999999999999776543211  


Q ss_pred             --ccccccc-----------cccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcce
Q psy11396        633 --GISRFTD-----------EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST  699 (829)
Q Consensus       633 --~~~~~~~-----------~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~  699 (829)
                        ....-..           ...+..+-.||||+|++|||+|+|+|+.|.-+||+|+++++|.|+.-|+.+|+..+.|..
T Consensus        96 ~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL  175 (292)
T KOG1681|consen   96 PEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTL  175 (292)
T ss_pred             cccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhH
Confidence              0000000           011222333999999999999999999999999999999999999999999999999999


Q ss_pred             eccccccC-HHHHHHHHhcCCccCHHHHHHcCCcccccC-hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHH
Q psy11396        700 LIFPQRFG-KILSREILFTASEFKGKELKERGISMPVLP-RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLST  777 (829)
Q Consensus       700 ~~l~r~iG-~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~-~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~  777 (829)
                      .+||..+| .+.++|+.+|++.|+|.||++.|||.+|+| .+++++.+..+|..|+..+|.+++.+|+.++.....+.++
T Consensus       176 ~RlpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrvf~dk~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~  255 (292)
T KOG1681|consen  176 NRLPKVVGNQSLARELAFTARKFSADEALDSGLVSRVFPDKEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSVEE  255 (292)
T ss_pred             hhhhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhhcCCHHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhhhh
Confidence            99999999 999999999999999999999999999998 5889999999999999999999999999999999889999


Q ss_pred             HHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        778 IFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       778 ~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      .+..-..+...++ -+++..+.+.+-++|++
T Consensus       256 sLnyvatwNms~L-~s~Dl~~av~a~m~k~k  285 (292)
T KOG1681|consen  256 SLNYVATWNMSML-LSDDLVKAVMAQMEKLK  285 (292)
T ss_pred             hHHHHHHHHHHHH-HHHHHHHHHHHHhhcCC
Confidence            9999999999988 57799999988888653

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.97  E-value=4.3e-32  Score=323.37  Aligned_cols=230  Identities=19%  Similarity=0.314  Sum_probs=198.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhccc--cccc--ccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGI--SRFT--DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~--~~~~--~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|. |++||+|+|++++.......  ..+.  ....+..+..+||||||
T Consensus        27 ~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA  106 (708)
T PRK11154         27 KMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKTAQEAEALARQGQQLFAEIEALPIPVVA  106 (708)
T ss_pred             CCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            4588999999999999999999999999999987 58999999998874321110  0110  01123345569999999


Q ss_pred             Eecccccchhhhhhhcccccccccc--ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      +|||+|+|||++|+++|||||++++  ++|++||+++|++|++|++++|++++|..+|++|+++|++++++||+++||||
T Consensus       107 aV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~~llltG~~i~a~eA~~~GLv~  186 (708)
T PRK11154        107 AIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVD  186 (708)
T ss_pred             EECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHHHHHHhCCcCCHHHHHHCCCCc
Confidence            9999999999999999999999997  48999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHH-------------HhcCCHH----------------------HHHHHHHHHHhhhhCCHHHH
Q psy11396        734 PVLPRKQVLFYSLKLAKK-------------LSLLSKK----------------------ELELQKKYYSHSLQKKLSTI  778 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~-------------i~~~~~~----------------------a~~~~K~~l~~~~~~~~~~~  778 (829)
                      +++|++++.+++.+++++             ++..+|.                      ++..+|++++.....+++++
T Consensus       187 ~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~  266 (708)
T PRK11154        187 DVVPHSILLEVAVELAKKGKPARRPLPVRERLLEGNPLGRALLFKQARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSG  266 (708)
T ss_pred             EecChHHHHHHHHHHHHhcCCccCcCCchhhhcccCchhHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHH
Confidence            999999999999999988             4555553                      68899999999888889999


Q ss_pred             HHHHHHHHHhhhcCChHHHHHHHHHHhh-ccccC
Q psy11396        779 FLHELTMHDYTFVNNPSVITNIERYFDK-SIKKN  811 (829)
Q Consensus       779 ~~~e~~~~~~~~~~~~~~~e~~~~~~~k-~~~~~  811 (829)
                      +..|...+..++ .+++.++++.+|+.+ +.|+.
T Consensus       267 l~~E~~~~~~~~-~s~~~~~~~~aF~~~~~~~~~  299 (708)
T PRK11154        267 YEAEARAFGELA-MTPESAALRSIFFATTEMKKD  299 (708)
T ss_pred             HHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCC
Confidence            999999999999 799999999999955 44443

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=99.97  E-value=9.2e-32  Score=319.68  Aligned_cols=230  Identities=18%  Similarity=0.292  Sum_probs=196.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeee-eCCCCeeeccCChhhhhhhhcc--ccc-c-cccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIII-TGYENYFACGGTKEGLLKIQKG--ISR-F-TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl-~g~g~~F~~G~D~~~~~~~~~~--~~~-~-~~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+||| +|.|++||+|+|++++......  ... . .....+..+..+||||||
T Consensus        22 ~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA  101 (699)
T TIGR02440        22 KMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAACQTAGEAKALAQQGQVLFAELEALPIPVVA  101 (699)
T ss_pred             CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhccCChhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            4688999999999999999999999999986 6789999999999987431110  000 0 011123345569999999


Q ss_pred             Eecccccchhhhhhhcccccccccc--ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      +|||+|+|||++|+++|||||++++  ++|++||+++|++|++|++++|++++|..++++++++|+.|+++||+++||||
T Consensus       102 aVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~a~eA~~~GLV~  181 (699)
T TIGR02440       102 AIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVD  181 (699)
T ss_pred             EECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHhCCCCc
Confidence            9999999999999999999999986  79999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHH-------------HHhcCCHHH----------------------HHHHHHHHHhhhhCCHHHH
Q psy11396        734 PVLPRKQVLFYSLKLAK-------------KLSLLSKKE----------------------LELQKKYYSHSLQKKLSTI  778 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~-------------~i~~~~~~a----------------------~~~~K~~l~~~~~~~~~~~  778 (829)
                      +++|++++++++.++++             +++..+|.+                      ...+|+.++.....+++++
T Consensus       182 ~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~  261 (699)
T TIGR02440       182 DVVPQSILLDTAVEMALKGKPIRKPLSLQERLLEGTPLGRALLFDQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKG  261 (699)
T ss_pred             EecChhHHHHHHHHHHHhCCCCCCCccchhhhcccCchhHHHHHHHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHH
Confidence            99999999999999998             566666555                      4456677888888889999


Q ss_pred             HHHHHHHHHhhhcCChHHHHHHHHHHhh-ccccC
Q psy11396        779 FLHELTMHDYTFVNNPSVITNIERYFDK-SIKKN  811 (829)
Q Consensus       779 ~~~e~~~~~~~~~~~~~~~e~~~~~~~k-~~~~~  811 (829)
                      ++.|...+..++ .+++.++.+..|+-+ +.|+.
T Consensus       262 l~~E~~~~~~~~-~s~~~~~~~~~f~~~~~~~~~  294 (699)
T TIGR02440       262 LDAEARAFGELV-MTPESAALRSIFFATTEMKKE  294 (699)
T ss_pred             HHHHHHHHHHhc-CCHHHHHHHHHHHHHHHhcCC
Confidence            999999999999 799999999999854 44444

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

Probab=99.97  E-value=1.4e-31  Score=255.93  Aligned_cols=224  Identities=19%  Similarity=0.276  Sum_probs=189.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCC--C-CeeeccCChhhhhhhh-----cccccccccccccccccCCCCE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGY--E-NYFACGGTKEGLLKIQ-----KGISRFTDEKSYCMPLYCKIPV  653 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~--g-~~F~~G~D~~~~~~~~-----~~~~~~~~~~~~~~~~~~~kp~  653 (829)
                      +|++.+..+.||.++|..++.|+++.+||+||.  | .+||+|+|-+.-....     +...+......-..++.+|||+
T Consensus        40 rNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~~d~~~~rLnvLdlQrlIR~~PKpV  119 (282)
T COG0447          40 RNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIPRLNVLDLQRLIRTMPKPV  119 (282)
T ss_pred             hccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCccCCccCcccchhhHHHHHHhCCcce
Confidence            678889999999999999999999999999985  4 7999999975433211     1111111122223344599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||.|+|+++|||-.|-+.||+.|+++++.|+....++|.+-++.++..|+|.+|..+|+|+.++++.++|+||+++|+||
T Consensus       120 iA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A~eal~MGlVN  199 (282)
T COG0447         120 IAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEEALDMGLVN  199 (282)
T ss_pred             EEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhhhhHHhhhhhhhccHHHHHhcCcee
Confidence            99999999999999999999999999999999999999999888888999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      .|||-++|++++.+|++.|...+|.++++.|..++..-  +-...++........+++..++.+|+..+|+|||
T Consensus       200 ~Vvp~~~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad~--DGlaG~q~~ag~at~L~YmTdEa~EGr~AF~eKR  271 (282)
T COG0447         200 TVVPHADLEKETVQWAREMLAKSPTALRMLKAAFNADC--DGLAGLQELAGNATLLYYMTDEAQEGRDAFLEKR  271 (282)
T ss_pred             eeccHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCC--chhhHHHHhcccceEEEEechhhhhhHHHHhhcc
Confidence            99999999999999999999999999999999988542  2334444444445566678999999999999988

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase

Probab=99.97  E-value=2.8e-31  Score=291.71  Aligned_cols=220  Identities=16%  Similarity=0.250  Sum_probs=178.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-c-----ccc-cccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-R-----FTD-EKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++........ .     +.. ......+..+|||+|
T Consensus        30 lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvI  109 (381)
T PLN02988         30 LNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQV  109 (381)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHCCCCEE
Confidence            577899999999999999999999999999999999999999998743211110 0     100 011123345999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|. .++++++||++++++||+++|||++
T Consensus       110 a~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~-~~~~l~LTG~~i~a~eA~~~GLv~~  188 (381)
T PLN02988        110 SILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGF-FGEYVGLTGARLDGAEMLACGLATH  188 (381)
T ss_pred             EEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHH-HHHHHHHcCCCCCHHHHHHcCCceE
Confidence            999999999999999999999999999999999999999999999999999997 6899999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD  805 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~  805 (829)
                      +||.+++.+.+.+++ +++..+|.++..+|+.+......... ...........++ ..+.+.+.++++.+
T Consensus       189 vv~~~~l~~~~~~la-~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~I~~~f-~~~~~~~i~~~L~~  256 (381)
T PLN02988        189 FVPSTRLTALEADLC-RIGSNDPTFASTILDAYTQHPRLKPQ-SAYHRLDVIDRCF-SRRTVEEIISALER  256 (381)
T ss_pred             ecCHhHHHHHHHHHH-HhhccCHHHHHHHHHHhhcCCCCCCc-hHHHHHHHHHHHh-CCCCHHHHHHHHHh
Confidence            999999999999988 78788899999999988743210111 1222355666667 45566666666553

>PLN02267 enoyl-CoA hydratase/isomerase family protein

Probab=99.97  E-value=3.8e-31  Score=275.53  Aligned_cols=189  Identities=19%  Similarity=0.232  Sum_probs=157.9

Q ss_pred             CCcccccccccccchhhhcccccce-eeeeeCCCCeeeccCChhhhhhhhccc---cccc--ccccccccccCCCCEEEE
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYK-VIIITGYENYFACGGTKEGLLKIQKGI---SRFT--DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr-~vVl~g~g~~F~~G~D~~~~~~~~~~~---~~~~--~~~~~~~~~~~~kp~Iaa  656 (829)
                      |+++.+|+.+|.++++++++|++++ +||++|.|+.||+|.|++++.......   ....  ....+..+..+||||||+
T Consensus        21 Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  100 (239)
T PLN02267         21 HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAAGSAPSRLHLMVAKLRPLVADLISLPMPTIAA  100 (239)
T ss_pred             CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhccccCHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            5689999999999999999998875 777799999999999998764211100   0000  112233455699999999


Q ss_pred             ecccccchhhhhhhcccccccc-ccceeccccccccccCCCcceeccccccCHHHH-HHHHhcCCccCHHHHHHcCCccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFS-EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS-REILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~-~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a-~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |||+|+|||++|+++||+||++ ++++|++||+++|++++++++.++++++|..++ ++++++|++|+++||+++||||+
T Consensus       101 V~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~llltG~~~~a~eA~~~Glv~~  180 (239)
T PLN02267        101 VTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDVLLRAAKLTAEEAVEMGIVDS  180 (239)
T ss_pred             ECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHHHHcCCcCCHHHHHHCCCcce
Confidence            9999999999999999999998 568999999999997444457789999999999 69999999999999999999999


Q ss_pred             ccC-hhhHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhh
Q psy11396        735 VLP-RKQVLFYSLKLAKKLSLL--SKKELELQKKYYSHSL  771 (829)
Q Consensus       735 v~~-~~~l~~~~~~~a~~i~~~--~~~a~~~~K~~l~~~~  771 (829)
                      ++| .+++.+++.+++++|+..  ++.++..+|+.++...
T Consensus       181 vv~~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~~~~  220 (239)
T PLN02267        181 AHDSAEETVEAAVRLGEELAARKWNGEVYASIRKSLLPEV  220 (239)
T ss_pred             ecCCHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHH
Confidence            998 478999999999999987  6678999999987654

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.97  E-value=2.2e-30  Score=284.79  Aligned_cols=225  Identities=15%  Similarity=0.223  Sum_probs=184.7

Q ss_pred             cccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--c----ccc-cccccccccCCCC
Q psy11396        580 ISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--R----FTD-EKSYCMPLYCKIP  652 (829)
Q Consensus       580 l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~----~~~-~~~~~~~~~~~kp  652 (829)
                      -+.|++|.+|+.+|..+++.+++|+++++|||+|.|++||+|+|++.+........  .    +.. ......+..+|||
T Consensus        61 ~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKP  140 (407)
T PLN02851         61 SSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKP  140 (407)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCC
Confidence            34688999999999999999999999999999999999999999998754221110  0    000 1111223359999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      +||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++++||++++++||+++||+
T Consensus       141 vIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~-~g~~L~LTG~~i~a~eA~~~GLa  219 (407)
T PLN02851        141 NVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGY-LGEYLALTGQKLNGVEMIACGLA  219 (407)
T ss_pred             EEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCH-HHHHHHHhCCcCCHHHHHHCCCc
Confidence            99999999999999999999999999999999999999999999999999999997 49999999999999999999999


Q ss_pred             ccccChhhHHHHHHH----------------------------------------------------------------H
Q psy11396        733 MPVLPRKQVLFYSLK----------------------------------------------------------------L  748 (829)
Q Consensus       733 ~~v~~~~~l~~~~~~----------------------------------------------------------------~  748 (829)
                      ++++|.+++.. +++                                                                |
T Consensus       220 ~~~v~~~~l~~-l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~~~~~w  298 (407)
T PLN02851        220 THYCLNARLPL-IEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASSYDEW  298 (407)
T ss_pred             eeecCHhhHHH-HHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccccchHH
Confidence            99998664421 000                                                                1


Q ss_pred             H----HHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhc--CChHHHHHHHHHHhh
Q psy11396        749 A----KKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFV--NNPSVITNIERYFDK  806 (829)
Q Consensus       749 a----~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~e~~~~~~~k  806 (829)
                      +    +.|.+.+|.++..+.+++++....++.+.+++|......++.  ..+|+.|++++.+-.
T Consensus       299 a~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LID  362 (407)
T PLN02851        299 CKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVD  362 (407)
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcC
Confidence            1    224456777888888888888778899999999998888763  478999999998853

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.97  E-value=1.4e-28  Score=260.41  Aligned_cols=247  Identities=29%  Similarity=0.436  Sum_probs=217.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC-CCcceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL-QGPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv  280 (829)
                      .+.|+.+|+++||+++|+++++++    ++++|+..+++.                  .+..+.+++..+|+ ++|+++|
T Consensus         7 ~~~l~~~A~~~al~~ag~~~~~i~----~li~~~~~~~~~------------------~~~~a~~i~~~lg~~~~~~~~i   64 (254)
T cd00327           7 ASELGFEAAEQAIADAGLSKGPIV----GVIVGTTGGSGE------------------FSGAAGQLAYHLGISGGPAYSV   64 (254)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCce----EEEEEECCCCcc------------------ccHHHHHHHHHhCCCCCCccee
Confidence            678999999999999999988887    999997765431                  34567899999999 8999999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||+.|+++|++|++|.+||+|+|.                               +++|||++++||++.+
T Consensus        65 ~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------~~~gdGAaa~vL~~~~  113 (254)
T cd00327          65 NQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------FVFGDGAAAAVVESEE  113 (254)
T ss_pred             ccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------eeecceEEEEEECcHH
Confidence            999999999999999999999999999999997                               6789999999999999


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcc
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK  440 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~  440 (829)
                      .+.+++.+++++|.++....++.... ..+......++++++|+++|++++|||++++|++++...|..|..+....++.
T Consensus       114 ~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~  192 (254)
T cd00327         114 HALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV  192 (254)
T ss_pred             HHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCC
Confidence            99999999999999998877765432 35667889999999999999999999999999999999999998887665542


Q ss_pred             cCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEE
Q psy11396        441 FSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA  520 (829)
Q Consensus       441 ~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a  520 (829)
                           ..+++.+.+..+||+.+|+|...+..++.+++++.+||.                             ....+++
T Consensus       193 -----~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~-----------------------------~~~~~~~  238 (254)
T cd00327         193 -----RSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT-----------------------------PREPRTV  238 (254)
T ss_pred             -----CCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC-----------------------------CCCcCEE
Confidence                 236889999999999999999999999999999999981                             0124679


Q ss_pred             EEeccCCCCceEEEEe
Q psy11396        521 AINSFGFSGTNAHIVL  536 (829)
Q Consensus       521 ~v~s~G~gG~na~~vl  536 (829)
                      ++++||+||+++++||
T Consensus       239 l~~~~g~Gg~~~~~~l  254 (254)
T cd00327         239 LLLGFGLGGTNAAVVL  254 (254)
T ss_pred             EEeeEcCCCcceEEEC
Confidence            9999999999999986

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=99.96  E-value=4.3e-30  Score=305.26  Aligned_cols=227  Identities=16%  Similarity=0.176  Sum_probs=187.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cc-c--cc--cccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GI-S--RF--TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~-~--~~--~~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++..... .. .  .+  .....+..+..+||||||
T Consensus        28 ~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIA  107 (714)
T TIGR02437        28 VNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFALPDAELIQWLLFANSIFNKLEDLPVPTVA  107 (714)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            578899999999999999999999999999999999999999998753110 00 0  00  011223344569999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|++++++|++++++||+++||||++
T Consensus       108 ai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~llltG~~~~A~eA~~~GLvd~v  187 (714)
T TIGR02437       108 AINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAEDALKVGAVDAV  187 (714)
T ss_pred             EECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCcEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcC---------C---------HHH---HH------------------HHHHHHHhhhhCCHH
Q psy11396        736 LPRKQVLFYSLKLAKKLSLL---------S---------KKE---LE------------------LQKKYYSHSLQKKLS  776 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~---------~---------~~a---~~------------------~~K~~l~~~~~~~~~  776 (829)
                      +|.+++.+++.++++++...         +         +..   ..                  ..-+.+......+++
T Consensus       188 v~~~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pap~~~~~~v~~~~~~~~~  267 (714)
T TIGR02437       188 VTADKLGAAALQLLKDAINGKLDWKAKRQPKLEPLKLSKIEAMMSFTTAKGMVAQVAGPHYPAPMTAVKTIEKAARFGRD  267 (714)
T ss_pred             eChhHHHHHHHHHHHHHhhcCCcccccCCCCcccccccchHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhcCCHH
Confidence            99999999999999774421         0         000   00                  111233444445688


Q ss_pred             HHHHHHHHHHHhhhcCChHHHHHHHHHHhhccc
Q psy11396        777 TIFLHELTMHDYTFVNNPSVITNIERYFDKSIK  809 (829)
Q Consensus       777 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~  809 (829)
                      +++..|.+.|.+++ .+++.+..+..|+.++..
T Consensus       268 ~gl~~E~~~f~~l~-~s~~a~~l~~~ff~~r~~  299 (714)
T TIGR02437       268 KALEIEAKGFVKLA-KTSEAKALIGLFLNDQYV  299 (714)
T ss_pred             HHHHHHHHHHHHHh-CCHHHHHHHHHHhhhHhh
Confidence            99999999999999 899999999999866543

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>KOG1682|consensus

Probab=99.96  E-value=1.9e-29  Score=238.77  Aligned_cols=226  Identities=17%  Similarity=0.227  Sum_probs=198.8

Q ss_pred             cccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---cccc-ccccccccCCCCEEE
Q psy11396        580 ISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---FTDE-KSYCMPLYCKIPVIA  655 (829)
Q Consensus       580 l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~~~~-~~~~~~~~~~kp~Ia  655 (829)
                      -..|+++.+|+.+|.+.+....+..++|+|||+..|+.||+|.|++++..-......   |+.. ..+..+..+|.|+|+
T Consensus        51 Kk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e~g~d~haevFqtc~dvmn~Irn~pVPVia  130 (287)
T KOG1682|consen   51 KKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNEPGSDIHAEVFQTCTDVMNDIRNLPVPVIA  130 (287)
T ss_pred             cccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcCccchHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            445677899999999999999999999999999999999999999998643322111   1111 223345559999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      .|||.|.++|+.|...||++|++++++|..|...+|+++..-|. -|+|.+++..+.+|++||.+|+++||+..|||+++
T Consensus       131 ~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRkva~~ML~Tg~Pi~~eeAl~sGlvskv  209 (287)
T KOG1682|consen  131 KVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRKVAAYMLMTGLPITGEEALISGLVSKV  209 (287)
T ss_pred             EecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchhHHHHHHHhCCCCchHHHHHhhhhhhc
Confidence            99999999999999999999999999999999999998876665 48899999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ||.++++.+++++++.|...+...+...|+..-.....+-.++++...+.+.+.+ .-.+.+|+|.+|++||
T Consensus       210 Vp~~el~~e~~~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~-ql~d~kegiasf~~kr  280 (287)
T KOG1682|consen  210 VPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENF-QLGDTKEGIASFFEKR  280 (287)
T ss_pred             CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcc-cccchHHHHHHHhccC
Confidence            9999999999999999999999999999999888887777888888888888888 6779999999999987

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=99.96  E-value=4.7e-29  Score=296.92  Aligned_cols=229  Identities=16%  Similarity=0.233  Sum_probs=184.3

Q ss_pred             cCCcccccccccccchhhhcccccceee-eeeCCCCeeeccCChhhhhhhhcccc--cc--cccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVI-IITGYENYFACGGTKEGLLKIQKGIS--RF--TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~v-Vl~g~g~~F~~G~D~~~~~~~~~~~~--~~--~~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.|+++|++ |++|.|++||+|+|++++........  .+  .....+..+..+||||||+
T Consensus        35 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAa  114 (737)
T TIGR02441        35 VNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAACKTAQEVTQLSQEGQEMFERIEKSQKPIVAA  114 (737)
T ss_pred             CCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhccCChHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            5889999999999999999999999965 56999999999999998753111000  00  0112233455699999999


Q ss_pred             ecccccchhhhhhhcccccccccc--ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |||+|+|||++|+++|||||++++  ++|++||+++|++|++|++++|+|++|..+|++++++|++++++||+++||||+
T Consensus       115 v~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~~A~~l~ltG~~i~a~eA~~~GLVd~  194 (737)
T TIGR02441       115 ISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQ  194 (737)
T ss_pred             ECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHHHHHHHHHcCCcCCHHHHHHCCCCeE
Confidence            999999999999999999999998  589999999999999999999999999999999999999999999999999999


Q ss_pred             ccCh-------------hhHHHHHHHHHHHHhcCC----------HH--------------HH-----------------
Q psy11396        735 VLPR-------------KQVLFYSLKLAKKLSLLS----------KK--------------EL-----------------  760 (829)
Q Consensus       735 v~~~-------------~~l~~~~~~~a~~i~~~~----------~~--------------a~-----------------  760 (829)
                      |+|+             +++.+.+.+++++++...          +.              ..                 
T Consensus       195 vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~A  274 (737)
T TIGR02441       195 LVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHKITQYVMTNPFVRQQVYKTAEDKVMKQTKGLYPA  274 (737)
T ss_pred             ecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCccchhhcccchhHHHHHHHHHHHHHHhccCCCcc
Confidence            9986             557888888887754311          00              01                 


Q ss_pred             -HHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh-ccccC
Q psy11396        761 -ELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK-SIKKN  811 (829)
Q Consensus       761 -~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k-~~~~~  811 (829)
                       ...-+.+......++++++..|.+.|.+++ .+++.+.-+..|+-. ..||.
T Consensus       275 p~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~-~s~~a~al~~~f~~~~~~~~~  326 (737)
T TIGR02441       275 PLKILDVVRTGYDQGPDAGYEAESKAFGELS-MTFESKALIGLFHGQTDCKKN  326 (737)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHccCC
Confidence             122334444445578999999999999999 799999999998844 44443

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.95  E-value=1.9e-28  Score=279.13  Aligned_cols=178  Identities=19%  Similarity=0.203  Sum_probs=152.9

Q ss_pred             cccCCcccccccccccchhhhc-ccccceeeeeeCC-CCeeeccCChhhhhhhhccccc-cc-c-----cccccccccCC
Q psy11396        580 ISKDLKNSTVVKGITDAFSYIN-SSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGISR-FT-D-----EKSYCMPLYCK  650 (829)
Q Consensus       580 l~~n~~~~~~~~eL~~~l~~~~-~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~~~-~~-~-----~~~~~~~~~~~  650 (829)
                      -+.|++|.+|+.+|.++++.++ +++++|+|||||. |++||+|+|++++......... .. .     ......+..+|
T Consensus        40 ~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~p  119 (546)
T TIGR03222        40 LKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGIEDSSRHSG  119 (546)
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHHHhccccchhhhHHHHHHHHHHHHHHHHHhCC
Confidence            3568899999999999999999 7899999999987 6999999999886432111000 00 0     00111233599


Q ss_pred             CCEEEEecccccchhhhhhhcccccccccc--ceecccccc-ccccCCCcceeccc--cccCHHHHHHHHhcCCccCHHH
Q psy11396        651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMR-YGFTPGAGSTLIFP--QRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~-~Gl~p~~g~~~~l~--r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      |||||+|||+|+|||++|+++||+||++++  ++|++||++ +|++|+++++.+++  +++|..+|++++++|++|+++|
T Consensus       120 kPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~e  199 (546)
T TIGR03222       120 LKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKR  199 (546)
T ss_pred             CCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhCHHHHHHHHHcCCCccHHH
Confidence            999999999999999999999999999987  799999997 99999999998887  6999999999999999999999


Q ss_pred             HHHcCCcccccChhhHHHHHHHHHHHHhcCCH
Q psy11396        726 LKERGISMPVLPRKQVLFYSLKLAKKLSLLSK  757 (829)
Q Consensus       726 A~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~  757 (829)
                      |++|||||+|||++++++++.+++++|+..+|
T Consensus       200 A~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p  231 (546)
T TIGR03222       200 AKEWRLVDEVVKPSQFDAAIAERAAELAAQSD  231 (546)
T ss_pred             HHHcCCceEEeChHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999998877

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

Probab=99.94  E-value=3.3e-28  Score=247.13  Aligned_cols=171  Identities=26%  Similarity=0.461  Sum_probs=152.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc---cc--cccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS---RF--TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~---~~--~~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+++++|.++++.++.|+++++|||+|.|+.||+|.|+.++........   .+  .....+..+..+||||||+
T Consensus        20 ~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~Ia~   99 (195)
T cd06558          20 RNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEEARAFIRELQELLRALLRLPKPVIAA   99 (195)
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcccccchhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence            688899999999999999999999999999999999999999998865443321   10  1122233344599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|.|+|++++++||+||++++++|++||+++|++|+.+++++|++++|.+++++++++|+.++++||+++|||++++
T Consensus       100 v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~ea~~~Glv~~~~  179 (195)
T cd06558         100 VNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVV  179 (195)
T ss_pred             ECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHH
Q psy11396        737 PRKQVLFYSLKLAKKL  752 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i  752 (829)
                      +.+++.+++.++++++
T Consensus       180 ~~~~l~~~a~~~a~~~  195 (195)
T cd06558         180 PDEELLAAALELARRL  195 (195)
T ss_pred             ChhHHHHHHHHHHhhC
Confidence            9999999999988763

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.94  E-value=6.2e-28  Score=276.02  Aligned_cols=178  Identities=17%  Similarity=0.223  Sum_probs=153.0

Q ss_pred             ccCCcccccccccccchhhhc-ccccceeeeeeCC-CCeeeccCChhhhhhhhccccc-ccc-c-----ccccccccCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYIN-SSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGISR-FTD-E-----KSYCMPLYCKI  651 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~-~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~~k  651 (829)
                      +.|+++.+|+.+|.+++++++ +++++|+|||+|. |++||+|+|++.+......... +.. .     .....+..+||
T Consensus        45 ~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~pk  124 (550)
T PRK08184         45 KLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIFMLGGSSHAWKVNFCKFTNETRNGIEDSSRHSGL  124 (550)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHHhHhccccchhhhHHHHHHHHHHHHHHHHHhCCC
Confidence            568899999999999999998 7899999999998 5899999999876432111000 000 0     01122345999


Q ss_pred             CEEEEecccccchhhhhhhcccccccccc--ceecccccc-ccccCCCcceeccc--cccCHHHHHHHHhcCCccCHHHH
Q psy11396        652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMR-YGFTPGAGSTLIFP--QRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       652 p~Iaav~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~-~Gl~p~~g~~~~l~--r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      ||||+|||+|+|||++|+++|||||++++  ++|++||++ +|++|+++++++++  +++|+.++++++++|+.++++||
T Consensus       125 PvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA  204 (550)
T PRK08184        125 KFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRA  204 (550)
T ss_pred             CEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHH
Confidence            99999999999999999999999999987  899999997 99999999999998  77999999999999999999999


Q ss_pred             HHcCCcccccChhhHHHHHHHHHHHHhcCCHH
Q psy11396        727 KERGISMPVLPRKQVLFYSLKLAKKLSLLSKK  758 (829)
Q Consensus       727 ~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~  758 (829)
                      ++|||||++||++++++++.+++++|+..+|.
T Consensus       205 ~~~GLVd~vv~~d~l~~~a~~~A~~ia~~~~~  236 (550)
T PRK08184        205 VDWRLVDEVVKPSKFDAKVAERAAELAAASDR  236 (550)
T ss_pred             HHcCCccEeeCHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999988764

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.92  E-value=7.6e-24  Score=236.88  Aligned_cols=265  Identities=14%  Similarity=0.172  Sum_probs=202.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+|+++||+|+|+++++++    .+++|+....+                 ..+ ..+..++..+|+.  -|+++|
T Consensus        27 ~~La~~A~~~AL~~agl~~~dID----~vi~g~~~~~~-----------------~~~-~~a~~va~~lGl~~~~p~~~V   84 (393)
T PRK05656         27 VELGAAVIRRLLEQTGLDPAQVD----EVILGQVLTAG-----------------AGQ-NPARQAAIKAGLPHSVPAMTL   84 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCC-----------------CCC-cHHHHHHHHcCCCCCcceEEe
Confidence            46899999999999999999999    88888653211                 011 2455688899996  499999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------HHH-----H-HH-cCCC--------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------HIK-----M-SK-SGML--------  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------~~~-----~-~~-~g~l--------  329 (829)
                      +++|+|++.|++.|+++|++|.+|++||+|+|.++....                ...     + .. .+..        
T Consensus        85 ~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~  164 (393)
T PRK05656         85 NKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENL  164 (393)
T ss_pred             cccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHH
Confidence            999999999999999999999999999999997764210                000     0 00 0000        


Q ss_pred             ------C-------------------CCCCCC----CCCC--------------------------------CCCCcc--
Q psy11396        330 ------S-------------------PDGHCY----SFDQ--------------------------------RANGFV--  346 (829)
Q Consensus       330 ------s-------------------~~~~~~----pfd~--------------------------------~~~G~~--  346 (829)
                            +                   +.+..+    |+..                                ..+|.+  
T Consensus       165 ~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~  244 (393)
T PRK05656        165 VEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTA  244 (393)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEc
Confidence                  0                   111110    1100                                012333  


Q ss_pred             -----cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        347 -----PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       347 -----~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                           ++|||+++||++++.|+++|.+|+++|.|++....     .+.+.+.+...+++++|+++|++|+|||++|+|++
T Consensus       245 ~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~  319 (393)
T PRK05656        245 GNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA  319 (393)
T ss_pred             cccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence                 89999999999999999999999999999988643     12233456778999999999999999999999965


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                           +.+|..++.+.|+-.   ..++++++.|..+|||.||+|+..++.++++|+.                       
T Consensus       320 -----f~~~~~~~~e~lg~~---~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~-----------------------  368 (393)
T PRK05656        320 -----FAAQSLAVGKELGWD---AAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR-----------------------  368 (393)
T ss_pred             -----cHHHHHHHHHHhCCC---CccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH-----------------------
Confidence                 556777878888731   3467899999999999999999999999998864                       


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                   ...|+++++...-||.-+++|||.
T Consensus       369 -------------~~~~~gl~~~c~~gG~g~a~~~e~  392 (393)
T PRK05656        369 -------------RDAKKGLATLCIGGGQGVALAIER  392 (393)
T ss_pred             -------------cCCCEEEEEEcccCcceEEEEEec
Confidence                         124678999999999999999985

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=1.6e-23  Score=234.95  Aligned_cols=285  Identities=20%  Similarity=0.224  Sum_probs=200.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+++++||+|||+++++++    ++++|+..+++..                .....+..++..+|++ +|.++|
T Consensus        22 ~~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~~~~~~~----------------~~~~~a~~va~~lGl~~~~~~~v   81 (389)
T PRK06064         22 LRDLAVEAGLEALEDAGIDGKDID----AMYVGNMSAGLFV----------------SQEHIAALIADYAGLAPIPATRV   81 (389)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc----------------ccccHHHHHHHHcCCCCCCeeEE
Confidence            356899999999999999999998    7888765433210                0112456788999997 699999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH--H-----------------------HHH------HHcCCC
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI--H-----------------------IKM------SKSGML  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--~-----------------------~~~------~~~g~l  329 (829)
                      +++|+|++.||..|+++|++|++|++||+|+|.+.....  .                       ..+      .+.|.-
T Consensus        82 ~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s  161 (389)
T PRK06064         82 EAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTT  161 (389)
T ss_pred             eCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCC
Confidence            999999999999999999999999999999987542110  0                       000      000000


Q ss_pred             -----------------CCCC----------------CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEe
Q psy11396        330 -----------------SPDG----------------HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGW  376 (829)
Q Consensus       330 -----------------s~~~----------------~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~  376 (829)
                                       .|..                .+.|+. ..+...++|||+++||++++.|++++.++ ++|.|+
T Consensus       162 ~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~  239 (389)
T PRK06064        162 EEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKAS  239 (389)
T ss_pred             HHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEE
Confidence                             0000                001111 23556889999999999999999987655 589999


Q ss_pred             eeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH--------hc-ccCCCC
Q psy11396        377 GVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES--------FN-KFSYHK  445 (829)
Q Consensus       377 ~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~--------~~-~~~~~~  445 (829)
                      +..++..+...  ..+...+...++++||+++|++|+|||++|+|+++|.. +.++.+++.-+        +. +.....
T Consensus       240 g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~-~~~~~e~lgl~~~G~~~~~~~~g~~~~~  318 (389)
T PRK06064        240 GQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA-EILAYEDLGFAKKGEGGKLAREGQTYIG  318 (389)
T ss_pred             EEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH-HHHHHHHcCCCCCCchHHHHHCCCccCC
Confidence            98877654321  11234566789999999999999999999999999963 44444444211        11 111112


Q ss_pred             CccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCC--CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEE
Q psy11396        446 NFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKV--LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAA  521 (829)
Q Consensus       446 ~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~--ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~  521 (829)
                      ..+||+..++.  .|||.+|+|+.+++++++||+.+-  -..                             +-...++++
T Consensus       319 g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~r-----------------------------qv~~a~~~l  369 (389)
T PRK06064        319 GDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQ-----------------------------QVIGAGYGL  369 (389)
T ss_pred             CCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCc-----------------------------cCCCccEEE
Confidence            35788888887  599999999999999999999852  110                             012357899


Q ss_pred             EeccC-CCCceEEEEeee
Q psy11396        522 INSFG-FSGTNAHIVLME  538 (829)
Q Consensus       522 v~s~G-~gG~na~~vl~e  538 (829)
                      +.++| .+.+++.+||+.
T Consensus       370 ~~~~g~~~~~~~~~vl~~  387 (389)
T PRK06064        370 THNVGGTGHTAVVHILSR  387 (389)
T ss_pred             EecCCCccceEEEEEEEe
Confidence            99988 445666777754

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.91  E-value=2.3e-23  Score=233.33  Aligned_cols=265  Identities=18%  Similarity=0.227  Sum_probs=196.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      ...|+.+|+++||+|||+++++||    ++++|+..+++.                  ....+..++..+|++.  |+++
T Consensus        22 ~~~La~~A~~~AL~dAgl~~~dID----~vi~~~~~~~~~------------------~~~~a~~v~~~lGl~~~~~~~~   79 (386)
T cd00751          22 ADDLGAAVIKALLERAGLDPEEVD----DVIMGNVLQAGE------------------GQNPARQAALLAGLPESVPATT   79 (386)
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEeccCCCC------------------CChHHHHHHHHcCCCCCCchhh
Confidence            367999999999999999999998    888876543331                  1123556888899974  8999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH------HH---------HHcCCCC--------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI------KM---------SKSGMLS--------------  330 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~------~~---------~~~g~ls--------------  330 (829)
                      |+++|+|++.||..|+++|++|.+|.+||+|+|.++......      .+         ...+...              
T Consensus        80 v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~  159 (386)
T cd00751          80 VNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENV  159 (386)
T ss_pred             hccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHH
Confidence            999999999999999999999999999999998763211000      00         0000000              


Q ss_pred             -------------------------C-------------------------CCCCCC-------------CC-----CCC
Q psy11396        331 -------------------------P-------------------------DGHCYS-------------FD-----QRA  342 (829)
Q Consensus       331 -------------------------~-------------------------~~~~~p-------------fd-----~~~  342 (829)
                                               +                         +...++             |+     ...
T Consensus       160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~  239 (386)
T cd00751         160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAG  239 (386)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCC
Confidence                                     0                         000000             01     113


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +.+.++||++++||++++.|++++.+++++|+|++.++++..     +...+...++++||++||++|+|||++|+|+++
T Consensus       240 d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f  314 (386)
T cd00751         240 NASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAF  314 (386)
T ss_pred             cCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechh
Confidence            346679999999999999999999999999999999877543     223456789999999999999999999999776


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                      +.    .|... .+.|+-.   ..+++++..+...||+.||+|+.++++++++|+..                       
T Consensus       315 ~~----~~~~~-~e~lg~~---~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~-----------------------  363 (386)
T cd00751         315 AA----QALAC-LKELGLD---PEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR-----------------------  363 (386)
T ss_pred             HH----HHHHH-HHHhCCC---hhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc-----------------------
Confidence            52    13332 3344421   12355666666789999999999999999999862                       


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                   ..++++++..+-||..+++|||
T Consensus       364 -------------~~~~gl~~~~~~gg~g~~~~ie  385 (386)
T cd00751         364 -------------GGRYGLATMCIGGGQGAAMVIE  385 (386)
T ss_pred             -------------CCCEEEEEEcccccceEEEEEE
Confidence                         2367999999999999999998

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=4.5e-23  Score=228.92  Aligned_cols=263  Identities=17%  Similarity=0.175  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.++.+++|+|+|+++++++    .+|+|......                  .....+..++...|+.  -|+++|
T Consensus        28 ~~L~~~a~~~al~~agi~~~~Id----~vv~G~~~~~~------------------~g~~~~r~~~~~~Gl~~~~p~~~V   85 (392)
T PRK06633         28 PMLAAHLIKDILQNSKIDPALVN----EVILGQVITGG------------------SGQNPARQTLIHAGIPKEVPGYTI   85 (392)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCccc------------------cccHHHHHHHHHCCCCCCccchhh
Confidence            34788999999999999999999    78888543211                  0123445677888985  499999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hHH-H-H---------H-----HHHc-CCCC------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PDI-H-I---------K-----MSKS-GMLS------------  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~-~-~---------~-----~~~~-g~ls------------  330 (829)
                      +++|+||+.|+..|+++|++|++|++||||+|.++. |.. . .         .     +... ....            
T Consensus        86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~  165 (392)
T PRK06633         86 NKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENIS  165 (392)
T ss_pred             cchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHHH
Confidence            999999999999999999999999999999998763 210 0 0         0     0000 0000            


Q ss_pred             ------------------------CCCC-CC----CC---------------------------------CC-----CCC
Q psy11396        331 ------------------------PDGH-CY----SF---------------------------------DQ-----RAN  343 (829)
Q Consensus       331 ------------------------~~~~-~~----pf---------------------------------d~-----~~~  343 (829)
                                              +... .+    |.                                 +.     ..+
T Consensus       166 ~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~n  245 (392)
T PRK06633        166 KQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGN  245 (392)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEechh
Confidence                                    0000 00    11                                 10     011


Q ss_pred             CcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396        344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT  423 (829)
Q Consensus       344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt  423 (829)
                      .+.++|||+++||++++.|+++|.+++++|+|++...+...     ..+.+...++++||+++|++|+||||+|.|    
T Consensus       246 ~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~Al~~AGl~p~DID~~ei~----  316 (392)
T PRK06633        246 ASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPS-----IMGTAPVPASQKALSKAGWSVNDLEVIEVN----  316 (392)
T ss_pred             cCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcc-----hhchHHHHHHHHHHHHcCCCHHHcCeeehh----
Confidence            26789999999999999999999999999999998764322     122456789999999999999999999988    


Q ss_pred             CCCChHHHHHHHHHhccc--CCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        424 KLGDPIEFEALCESFNKF--SYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       424 ~~gD~~E~~Al~~~~~~~--~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                            |..++..++...  .....++++++.|..+|||+||+|+++++.++++|++.                      
T Consensus       317 ------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~----------------------  368 (392)
T PRK06633        317 ------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA----------------------  368 (392)
T ss_pred             ------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc----------------------
Confidence                  444444443211  11234578889999999999999999999999999761                      


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                    ..++++++..+-||.-.++|||.
T Consensus       369 --------------~~~~g~~~~c~~gG~g~a~~~e~  391 (392)
T PRK06633        369 --------------KAKKGLVTLCIGGGMGMAMCVEA  391 (392)
T ss_pred             --------------CCCeEEEEEecccChhheEEEEe
Confidence                          12468888888899999999985

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=5.9e-23  Score=229.00  Aligned_cols=265  Identities=18%  Similarity=0.206  Sum_probs=197.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ...|+.+++++||+|+|+++++++    .|++|+...++.                 ....++..++..+|+.  .|+++
T Consensus        27 ~~dL~~~A~~~aL~~agi~~~~ID----~vi~G~~~~~~~-----------------~~~~~a~~i~~~lGl~~~~p~~~   85 (392)
T PRK07108         27 GATLGGHVVQHAVERAKLDPAEVE----DVIMGCANPEGA-----------------TGANIARQIALRAGLPVTVPGMT   85 (392)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----cEEEEEeecccc-----------------cccHHHHHHHHHcCCCCCCceee
Confidence            467899999999999999999998    688886543321                 1123677888888985  79999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------HH-----------HH-----HHcCCCC---
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------HI-----------KM-----SKSGMLS---  330 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------~~-----------~~-----~~~g~ls---  330 (829)
                      |+++|+||+.||+.|+++|++|++|++||||+|.++....          ..           ..     .....++   
T Consensus        86 V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~~  165 (392)
T PRK07108         86 VNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKER  165 (392)
T ss_pred             ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHHH
Confidence            9999999999999999999999999999999998764210          00           00     0000000   


Q ss_pred             ----------------C--------------CCCCCC---------------------------------CC----CCCC
Q psy11396        331 ----------------P--------------DGHCYS---------------------------------FD----QRAN  343 (829)
Q Consensus       331 ----------------~--------------~~~~~p---------------------------------fd----~~~~  343 (829)
                                      .              ++...|                                 |.    ...+
T Consensus       166 ~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~n  245 (392)
T PRK07108        166 QDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAGN  245 (392)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCCc
Confidence                            0              000001                                 10    0123


Q ss_pred             CcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396        344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT  423 (829)
Q Consensus       344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt  423 (829)
                      ...++|||+++||++++.|+++|.+++++|+|++...+..     .+...+...++++||+++|++|+|||++|.|    
T Consensus       246 ~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~Did~~ei~----  316 (392)
T PRK07108        246 ASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEP-----DEMGIGPVFAVPKLLKQAGLKVDDIDLWELN----  316 (392)
T ss_pred             CCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCC-----cccchhHHHHHHHHHHHcCCCHHHcCchHhh----
Confidence            3568999999999999999999999999999998875432     2233456789999999999999999999988    


Q ss_pred             CCCChHHHHHHHHHhc--ccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        424 KLGDPIEFEALCESFN--KFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       424 ~~gD~~E~~Al~~~~~--~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                            |..++..++.  .......++++++.+..+|||.||+|+..++.++.+|++.                      
T Consensus       317 ------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~----------------------  368 (392)
T PRK07108        317 ------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR----------------------  368 (392)
T ss_pred             ------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh----------------------
Confidence                  5555555542  1111234567777778889999999999999999999661                      


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                    ..++++++..+-||.-+++|||.
T Consensus       369 --------------~~~~g~~~~c~~gg~g~a~~ie~  391 (392)
T PRK07108        369 --------------GAKYVVVTMCIGGGQGAAGLFEV  391 (392)
T ss_pred             --------------CCCEEEEEEccccChhhEEEEEe
Confidence                          13578889899999999999984

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.90  E-value=1.3e-22  Score=227.23  Aligned_cols=250  Identities=19%  Similarity=0.196  Sum_probs=181.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+++++||+|||+++++|+    ++++|+...+..                  ....+..++..+|+.+ |.++|
T Consensus        21 ~~eLa~~A~~~AL~dAgi~~~dID----~vi~g~~~~~~~------------------~~~~a~~v~~~lGl~~~~~~~v   78 (385)
T PRK12578         21 VQELAWESIKEALNDAGVSQTDIE----LVVVGSTAYRGI------------------ELYPAPIVAEYSGLTGKVPLRV   78 (385)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc------------------cCChHHHHHHHhCCCCCCeeEE
Confidence            357999999999999999999998    888885432110                  1123556888999976 77899


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH---H--------HHH--HcCC------------------C
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH---I--------KMS--KSGM------------------L  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---~--------~~~--~~g~------------------l  329 (829)
                      +++|+|++.||..|+++|++|++|.+||+|+|.+......   .        .+.  ..|.                  +
T Consensus        79 ~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~  158 (385)
T PRK12578         79 EAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGT  158 (385)
T ss_pred             eccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999976532100   0        000  0000                  0


Q ss_pred             C------------------CCCC----------------CCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEE
Q psy11396        330 S------------------PDGH----------------CYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG  375 (829)
Q Consensus       330 s------------------~~~~----------------~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g  375 (829)
                      +                  |...                +.|+ ...+.+.++|||+++||++++.|++.+.+++++|+|
T Consensus       159 t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g  237 (385)
T PRK12578        159 TEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELKIDSPVWITG  237 (385)
T ss_pred             CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEE
Confidence            0                  1000                0011 123446689999999999999999988777789999


Q ss_pred             eeeecCCCCCCC-CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhc--c-----------
Q psy11396        376 WGVNQDGKTNGI-TAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN--K-----------  440 (829)
Q Consensus       376 ~~~~~dg~~~~~-~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~--~-----------  440 (829)
                      ++..++...... ... ...+...++++||++||++|+|||++|.|+++|    ..|..++... +  .           
T Consensus       238 ~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft----~~~l~~le~l-Gl~~~G~~~~~~~~G  312 (385)
T PRK12578        238 IGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFT----IAEIMGYEDL-GFTEKGKGGKFIEEG  312 (385)
T ss_pred             EEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh----HHHHHHHHHc-CCCCCCchHHHHHCC
Confidence            998877543221 111 123566899999999999999999999999998    4466666533 2  1           


Q ss_pred             cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        441 FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       441 ~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      .....+.+||+...+.+  |||.||+|+.+++.++++|+..
T Consensus       313 ~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~  353 (385)
T PRK12578        313 QSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDE  353 (385)
T ss_pred             CccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCC
Confidence            11223456887777776  9999999999999999999874

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=99.90  E-value=2.1e-24  Score=200.35  Aligned_cols=118  Identities=43%  Similarity=0.775  Sum_probs=100.0

Q ss_pred             EEEEEEeeeecCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcc
Q psy11396        370 YCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFC  448 (829)
Q Consensus       370 ~a~I~g~~~~~dg-~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~  448 (829)
                      ||+|+|+++++|+ .+.....|++.++.++|++||+++|++|+|||||++||+||+.+|..|+.+|.++|+.... ..++
T Consensus         1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~-~~~~   79 (119)
T PF02801_consen    1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSAR-QQPV   79 (119)
T ss_dssp             SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGG-TSTS
T ss_pred             CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccccc-cccc
Confidence            6899999999999 7888999999999999999999999999999999999999999999999999999997543 4569


Q ss_pred             ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCC
Q psy11396        449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN  488 (829)
Q Consensus       449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~  488 (829)
                      +|+++|+++||+++|||++++++++++|++++|||++||+
T Consensus        80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~  119 (119)
T PF02801_consen   80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE  119 (119)
T ss_dssp             EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred             ceeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence            9999999999999999999999999999999999999985

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PRK09051 beta-ketothiolase; Provisional

Probab=99.90  E-value=2.7e-22  Score=223.83  Aligned_cols=266  Identities=16%  Similarity=0.202  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+|+++||+|+|+++++|+    .|++|+..+++.                 .....+..++...|+.  .|+++|
T Consensus        28 ~eL~~~A~~~AL~~agi~~~dID----~vi~g~~~~~~~-----------------~~~~~a~~~~~~~Gl~~~~p~~~V   86 (394)
T PRK09051         28 TDLGATVVREALARAGVDPDQVG----HVVFGHVIPTEP-----------------RDMYLSRVAAINAGVPQETPAFNV   86 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC----EEEEeeeccccC-----------------CCccHHHHHHHHcCCCCCCceEEe
Confidence            46889999999999999999998    788886543221                 0112334455667884  599999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------HHH----HHH-c-C-CC--------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------HIK----MSK-S-G-ML--------  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------~~~----~~~-~-g-~l--------  329 (829)
                      +++|+||+.|++.|+++|++|.+|++||+|+|.++....                ...    +.. . . .+        
T Consensus        87 ~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  166 (394)
T PRK09051         87 NRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVA  166 (394)
T ss_pred             cccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHHH
Confidence            999999999999999999999999999999998764211                000    000 0 0 00        


Q ss_pred             ------------------------------------------------CCCCCC------------CCCCC-------CC
Q psy11396        330 ------------------------------------------------SPDGHC------------YSFDQ-------RA  342 (829)
Q Consensus       330 ------------------------------------------------s~~~~~------------~pfd~-------~~  342 (829)
                                                                      .++...            +|+..       ..
T Consensus       167 ~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~  246 (394)
T PRK09051        167 AKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAG  246 (394)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCC
Confidence                                                            011111            11111       11


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +...++|||+++||++++.|+++|.+++++|+|++.......     +...+...+++++|++||++|+|||+||+|++ 
T Consensus       247 ~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~agi~~~did~~ei~d~-  320 (394)
T PRK09051        247 NASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPE-----YMGIGPVPATQKALERAGLTVADLDVIEANEA-  320 (394)
T ss_pred             cCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCC-----cccccHHHHHHHHHHHcCCCHHHcCEEEecCc-
Confidence            235568999999999999999999999999999998764322     22345678999999999999999999999965 


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                          +.++..+..+.|+-   ...+++++..+..+|||.||+|+..++.++.+|+++                       
T Consensus       321 ----f~~~~~~~~e~lg~---~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~-----------------------  370 (394)
T PRK09051        321 ----FAAQACAVTRELGL---DPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI-----------------------  370 (394)
T ss_pred             ----cHHHHHHHHHHhCC---CccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc-----------------------
Confidence                33455556667763   122334444444579999999999999999999761                       


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                   ..++++++...-||.-.++|||.
T Consensus       371 -------------~~~~g~~~~c~~gG~g~a~~~e~  393 (394)
T PRK09051        371 -------------GGRYALVTMCIGGGQGIAAIFER  393 (394)
T ss_pred             -------------CCCEEEEEEccccChhhEEEEEe
Confidence                         23578888888899999999985

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.90  E-value=3.3e-22  Score=222.46  Aligned_cols=264  Identities=18%  Similarity=0.210  Sum_probs=194.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv  280 (829)
                      ..|+.+|++++|+++|+++++++    -|++|+..+.+.                 ....++...+...|+  +-|+++|
T Consensus        29 ~dLa~~A~~~al~~agi~p~~ID----~vi~G~~~~~~~-----------------~~~~~~r~a~~~~Gl~~~~pa~~V   87 (402)
T PRK08242         29 VRLAAGLLEALRDRNGLDTAAVD----DVVLGCVTPVGD-----------------QGADIARTAVLAAGLPETVPGVQI   87 (402)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc-----------------ccccHHHHHHHHcCCCCCCCeEEE
Confidence            35788899999999999999999    788886543211                 112344455567787  3599999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-----------HHH----HHHcC------------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----------HIK----MSKSG------------------  327 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-----------~~~----~~~~g------------------  327 (829)
                      +.+|+|++.||..|+++|++|.+|++||+|+|.++....           ...    +..+|                  
T Consensus        88 n~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d  167 (402)
T PRK08242         88 NRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVD  167 (402)
T ss_pred             cchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHH
Confidence            999999999999999999999999999999998764221           000    00000                  


Q ss_pred             -----------------C----------------CCCCCCCC-------------CCCCC--------------------
Q psy11396        328 -----------------M----------------LSPDGHCY-------------SFDQR--------------------  341 (829)
Q Consensus       328 -----------------~----------------ls~~~~~~-------------pfd~~--------------------  341 (829)
                                       .                +.++...|             .|+..                    
T Consensus       168 ~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~  247 (402)
T PRK08242        168 AYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERI  247 (402)
T ss_pred             HHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccc
Confidence                             0                01111111             13221                    


Q ss_pred             ------CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396        342 ------ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       342 ------~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~  415 (829)
                            .+...++|||+++||++++.|+++|.+++++|.|++...+......     .+...+++++|+++|++++|||+
T Consensus       248 ~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~-----~~~~~a~~~al~~AGl~~~DID~  322 (402)
T PRK08242        248 NHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIML-----TGPVPATRKALAKAGLTVDDIDL  322 (402)
T ss_pred             cCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhc-----ccHHHHHHHHHHHcCCCHHHCCE
Confidence                  1344789999999999999999999999999999988765432222     22357999999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        416 LEAHGTGTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      +|.|       |..+.+.+  .+.|+-   ...++++++.+..+|||.||+|+..++.++++|+++              
T Consensus       323 ~ei~-------daFa~~~l~~~e~lG~---~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~--------------  378 (402)
T PRK08242        323 FELN-------EAFASVVLRFMQALDI---PHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR--------------  378 (402)
T ss_pred             EEec-------chhhHHHHHHHHHhCC---CCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence            9998       55555443  344442   234577888888899999999999999999999761              


Q ss_pred             CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                            ..++++++...=||+..++|||.
T Consensus       379 ----------------------~~~~g~~~~c~ggG~g~a~~~e~  401 (402)
T PRK08242        379 ----------------------GKRTALITLCVGGGMGIATIIER  401 (402)
T ss_pred             ----------------------CCCeEEEEEcccCCceeEEEEEe
Confidence                                  23578888888899999999985

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.89  E-value=6.4e-22  Score=220.98  Aligned_cols=262  Identities=16%  Similarity=0.255  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHHHHHc-CCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        203 QRLFLQNCWTCIEDA-GYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~dA-Gl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ..|+.+|+++||+|+ |+++++|+    .|++|+...++.                 .....+..+...+|+.  -|+++
T Consensus        32 ~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~~~~~~~-----------------~~~~~ar~~~~~~Gl~~~~p~~~   90 (399)
T PRK09052         32 DDLLAHVLRSAVAQVPGLDPKLIE----DAIVGCAMPEAE-----------------QGLNVARIGALLAGLPNSVGGVT   90 (399)
T ss_pred             HHHHHHHHHHHHHhccCcCHHHCC----EEEEEecCCCCC-----------------CCchHHHHHHHHcCCCCCCceee
Confidence            568899999999997 99999999    888886543221                 0112233345556885  47999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--------HHHHH---cCC----------------CC--
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--------IKMSK---SGM----------------LS--  330 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--------~~~~~---~g~----------------ls--  330 (829)
                      |+++|+||+.|+..|+++|++|++|++||+|+|.++.....        ..+..   .+.                ++  
T Consensus        91 V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre  170 (399)
T PRK09052         91 VNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSRE  170 (399)
T ss_pred             ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHH
Confidence            99999999999999999999999999999999987543200        00000   000                00  


Q ss_pred             ----------------CC-CCC----CC---------------------C----------------------C-----CC
Q psy11396        331 ----------------PD-GHC----YS---------------------F----------------------D-----QR  341 (829)
Q Consensus       331 ----------------~~-~~~----~p---------------------f----------------------d-----~~  341 (829)
                                      ++ +..    .|                     +                      +     ..
T Consensus       171 ~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~  250 (399)
T PRK09052        171 DQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTA  250 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEEC
Confidence                            00 000    00                     0                      0     00


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      .+.+.++|||+++||++++.|+++|.+++++|.|++.......     +...+...++++||++||++|+|||++|.|  
T Consensus       251 ~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~-----~~~~~~~~A~~~al~~Agi~~~did~~ei~--  323 (399)
T PRK09052        251 GNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE-----IMGIGPIEAIPAALKQAGLKQDDLDWIELN--  323 (399)
T ss_pred             CccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCC-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeC--
Confidence            1226789999999999999999999999999999998754322     223356789999999999999999999987  


Q ss_pred             CCCCCChHHHHHH--HHHhcccCCCCCccccCCccc--CcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396        422 GTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKS--NIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE  497 (829)
Q Consensus       422 gt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~--~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~  497 (829)
                           |+.+.+.+  .+.|+-     ...+|+..++  .+|||.||+|+++++.++++|+++                  
T Consensus       324 -----D~f~~~~l~~~e~lg~-----~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~------------------  375 (399)
T PRK09052        324 -----EAFAAQSLAVIRDLGL-----DPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT------------------  375 (399)
T ss_pred             -----cHHHHHHHHHHHHhCC-----CCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc------------------
Confidence                 66555443  445552     1246777777  569999999999999999999772                  


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                        ..++.+++..+-||.-.++|||.
T Consensus       376 ------------------~~~~g~~~~c~~gg~g~a~~~e~  398 (399)
T PRK09052        376 ------------------NLKYGMVTMCVGTGMGAAGIFER  398 (399)
T ss_pred             ------------------CCCeEEEEEcccCCceeEEEEEe
Confidence                              12468888888999999999984

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.89  E-value=4.2e-22  Score=222.00  Aligned_cols=264  Identities=16%  Similarity=0.183  Sum_probs=195.7

Q ss_pred             HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ..|+.++.+++|+ ++|+++++|+    .+|+|......                 .....++..++...||.  -|+++
T Consensus        27 ~~L~~~a~~~al~r~a~i~~~~Id----~vi~G~~~~~~-----------------~~g~~~ar~~~l~~Gl~~~vp~~t   85 (400)
T PRK13359         27 DDLGAVPLKALVERNPDVDWAAID----DVIYGCANQAG-----------------EDNRNVARMSLLLAGLPHGVPGST   85 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC----EEEEEeccccc-----------------cccccHHHHHHHHcCCCCCCceEE
Confidence            3477889999999 5799999999    78887543110                 00134667788888985  49999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-----HH-------H-------------H-c-CC----
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-----KM-------S-------------K-S-GM----  328 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-----~~-------~-------------~-~-g~----  328 (829)
                      |+.+|+||+.|+..|+++|++|++|++||||+|+|+......     .+       .             . . +.    
T Consensus        86 V~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~  165 (400)
T PRK13359         86 INRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPE  165 (400)
T ss_pred             EeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHH
Confidence            999999999999999999999999999999999987532100     00       0             0 0 00    


Q ss_pred             ----------CC-------------------CCCCC-------------------------C------------CCCC--
Q psy11396        329 ----------LS-------------------PDGHC-------------------------Y------------SFDQ--  340 (829)
Q Consensus       329 ----------ls-------------------~~~~~-------------------------~------------pfd~--  340 (829)
                                ++                   +.+..                         |            .|+.  
T Consensus       166 ~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~~g  245 (400)
T PRK13359        166 TAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRPDG  245 (400)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCCCC
Confidence                      00                   00000                         0            1221  


Q ss_pred             ---CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        341 ---RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       341 ---~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                         ..+.+.++|||+++||++++.|+++|.+++++|.|++.....     +.+...+...+++++|+++|++|+|||+||
T Consensus       246 ~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~al~~AGl~~~DID~ie  320 (400)
T PRK13359        246 TVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE-----PRVMGIGPAPATQKLLARLGMTLDQFDVIE  320 (400)
T ss_pred             ceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CCccchhHHHHHHHHHHHhCCCHHHcCcCc
Confidence               122356799999999999999999999999999999886421     223445668899999999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHH--HHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        418 AHGTGTKLGDPIEFEALC--ESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~--~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      .|       |..+.+.+.  +.|+-.   .+..||+..++.  +|||.||+|+..++.++.+|+..              
T Consensus       321 i~-------dafa~~~l~~~e~lg~~---~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~--------------  376 (400)
T PRK13359        321 LN-------EAFASQGLAVLRELGLA---DDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT--------------  376 (400)
T ss_pred             cC-------cHhHHHHHHHHHHcCCC---CCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc--------------
Confidence            77       777665543  445421   123689999997  79999999999999999999761              


Q ss_pred             CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                            ..++++++..+-||+-.++|||.
T Consensus       377 ----------------------~~~~g~~~~c~~gG~g~a~~ie~  399 (400)
T PRK13359        377 ----------------------GGRFALCTMCIGVGQGIAIAIER  399 (400)
T ss_pred             ----------------------CCCeEEEEEcccCCceeEEEEEe
Confidence                                  23568888888899999999985

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.89  E-value=1.2e-21  Score=218.56  Aligned_cols=264  Identities=18%  Similarity=0.241  Sum_probs=195.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+++++||+|+|+.+++++    .+++|+..++.                 .....++..++..+|+.  -|.++|
T Consensus        28 ~eLa~~A~~~AL~~ag~~~~dID----~vi~g~~~~~~-----------------~~g~~~a~~~~~~lGl~~~~p~~~V   86 (391)
T PRK07661         28 DDLGALVVKETLKRAGNYEGPID----DLIIGCAMPEA-----------------EQGLNMARNIGALAGLPYTVPAITI   86 (391)
T ss_pred             HHHHHHHHHHHHHhcCCChhHCC----EEEEEeccccc-----------------cccchHHHHHHHHcCCCCCcceeeh
Confidence            56889999999999998778888    78888543210                 00122344688889997  499999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-----------------H---H------HHHHcCCCC----
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----------------H---I------KMSKSGMLS----  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-----------------~---~------~~~~~g~ls----  330 (829)
                      +++|+||+.|+..|+++|++|.+|++||+|+|.++....                 +   +      ...+.|...    
T Consensus        87 ~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~a  166 (391)
T PRK07661         87 NRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQD  166 (391)
T ss_pred             hhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHHH
Confidence            999999999999999999999999999999998753210                 0   0      000011000    


Q ss_pred             -------------CCC-CC---------------------------------------------CC-CC-----CCCCCc
Q psy11396        331 -------------PDG-HC---------------------------------------------YS-FD-----QRANGF  345 (829)
Q Consensus       331 -------------~~~-~~---------------------------------------------~p-fd-----~~~~G~  345 (829)
                                   +.. ..                                             +| |.     ...+..
T Consensus       167 ~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~  246 (391)
T PRK07661        167 AFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSS  246 (391)
T ss_pred             HHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccC
Confidence                         000 00                                             01 10     122345


Q ss_pred             ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396        346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL  425 (829)
Q Consensus       346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~  425 (829)
                      .++|||+++||++++.|+++|.+++++|+|++...+...     +...+...+++++|+++|++|+|||+||.|      
T Consensus       247 ~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~~ei~------  315 (391)
T PRK07661        247 QMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPE-----VMGIGPIAAIPKALKLAGLELSDIGLFELN------  315 (391)
T ss_pred             CCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCc-----ccchHHHHHHHHHHHHcCCCHHHCCEEEeC------
Confidence            689999999999999999999999999999998865322     123466889999999999999999999987      


Q ss_pred             CChHHHHHHHH--HhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396        426 GDPIEFEALCE--SFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI  503 (829)
Q Consensus       426 gD~~E~~Al~~--~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v  503 (829)
                       |..+.+.+..  .|+-   ...++++++.+..+|||.||+|+.+++.++++|+++                        
T Consensus       316 -d~f~~~~l~~~e~lg~---~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~------------------------  367 (391)
T PRK07661        316 -EAFASQSIQVIRELGL---DEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR------------------------  367 (391)
T ss_pred             -CHHHHHHHHHHHHcCC---CCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc------------------------
Confidence             7777777763  4542   223566777777789999999999999999999761                        


Q ss_pred             ccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                  ..++.+++..+-||.-.++|||.
T Consensus       368 ------------~~~~g~~~~c~~gg~g~a~~~e~  390 (391)
T PRK07661        368 ------------NEQFGIVTMCIGGGMGAAGVFEL  390 (391)
T ss_pred             ------------CCCeEEEEEccccChhhEEEEEe
Confidence                        12568888888899999999984

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.89  E-value=4.4e-22  Score=222.52  Aligned_cols=265  Identities=17%  Similarity=0.202  Sum_probs=192.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ...|+.+|+++||+|||+++++|+    ++++|+...++.                 . ...+..++..+|+.  .|++.
T Consensus        21 ~~~La~~A~~~Al~dAgl~~~dID----~vv~g~~~~~~~-----------------~-~~~a~~va~~lGl~~~~~~~~   78 (386)
T TIGR01930        21 AEDLGAAVIKELLERNPLDPELID----DVIFGNVLQAGE-----------------Q-QNIARQAALLAGLPESVPAYT   78 (386)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-----------------C-ChHHHHHHHHcCCCCCceeee
Confidence            367999999999999999999998    788875432221                 0 12345677888885  48999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-----------H-----H-HHcCCCCC-----------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-----------K-----M-SKSGMLSP-----------  331 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-----------~-----~-~~~g~ls~-----------  331 (829)
                      |+++|+|++.||..|+++|++|.+|.+||+|+|.+.......           .     + ...+...+           
T Consensus        79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~  158 (386)
T TIGR01930        79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE  158 (386)
T ss_pred             ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence            999999999999999999999999999999998753211000           0     0 00010000           


Q ss_pred             -----CC-----------------CC--C---------CC---------------------C-----------------C
Q psy11396        332 -----DG-----------------HC--Y---------SF---------------------D-----------------Q  340 (829)
Q Consensus       332 -----~~-----------------~~--~---------pf---------------------d-----------------~  340 (829)
                           .+                 ..  +         |.                     .                 .
T Consensus       159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~  238 (386)
T TIGR01930       159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVT  238 (386)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeee
Confidence                 00                 00  0         21                     0                 0


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      ..+.+.++|||+++||++++.|++++.+++++|.|++......     .+...+..+++++||++||++|+|||++|.|.
T Consensus       239 ~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d  313 (386)
T TIGR01930       239 AGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDP-----EIMGLGPVPAIPKALKKAGLSISDIDLFEINE  313 (386)
T ss_pred             CCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCC-----ccccccHHHHHHHHHHHcCCCHHHCCeeehcc
Confidence            1233456999999999999999999999999999998875421     22234557899999999999999999999997


Q ss_pred             CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSP  500 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~  500 (829)
                      +.+.    .|.. ..+.|+-   ...++++++.+..+|||.||+|+.+++.+++||+..                     
T Consensus       314 ~fa~----~~~~-~~e~lG~---~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~---------------------  364 (386)
T TIGR01930       314 AFAA----QVLA-CIKELGL---DLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR---------------------  364 (386)
T ss_pred             hhHH----HHHH-HHHHhCC---ChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc---------------------
Confidence            7752    2333 3345542   122456666667789999999999999999999873                     


Q ss_pred             eeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        501 FFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       501 ~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                     ..++++++..+-||+..++|||
T Consensus       365 ---------------~~~~gl~~~~~~gG~g~~~~~e  386 (386)
T TIGR01930       365 ---------------GGRYGLATICIGGGQGIAVILE  386 (386)
T ss_pred             ---------------CCCEEEEEEeccCCceEEEEeC
Confidence                           2367899999999999999886

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>KOG1684|consensus

Probab=99.89  E-value=3.2e-23  Score=214.05  Aligned_cols=233  Identities=18%  Similarity=0.256  Sum_probs=189.5

Q ss_pred             eccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhccccc--
Q psy11396        560 PLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGISR--  636 (829)
Q Consensus       560 ~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~~~--  636 (829)
                      ++.-++|.+|+             ++|.+|+..+-..+...+.++.+++||+.|. +++||+|+|+............  
T Consensus        50 ~itLNRPKaLN-------------AlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~~  116 (401)
T KOG1684|consen   50 VITLNRPKALN-------------ALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETPE  116 (401)
T ss_pred             EEEecCchhhc-------------cccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCchH
Confidence            34556666664             5688899999999999999999999999999 7999999998865543222111  


Q ss_pred             ----cccccc-ccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHH
Q psy11396        637 ----FTDEKS-YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS  711 (829)
Q Consensus       637 ----~~~~~~-~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a  711 (829)
                          |..... ...+-.+.||.||.++|..+|||++|.+.--|||++|++.|++||+.+|++|+.|++++|+|..| ...
T Consensus       117 ~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg-~lg  195 (401)
T KOG1684|consen  117 VKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG-YLG  195 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc-HHH
Confidence                111111 12222389999999999999999999999999999999999999999999999999999999988 799


Q ss_pred             HHHHhcCCccCHHHHHHcCCcccccChhhHHHHHH---------------------------------------------
Q psy11396        712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSL---------------------------------------------  746 (829)
Q Consensus       712 ~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~---------------------------------------------  746 (829)
                      .++.+||+++++.+|+..||.++.||.++|..--+                                             
T Consensus       196 ~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~  275 (401)
T KOG1684|consen  196 LYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSA  275 (401)
T ss_pred             HhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhcc
Confidence            99999999999999999999999988655421111                                             


Q ss_pred             ------------------------HHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHH
Q psy11396        747 ------------------------KLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIER  802 (829)
Q Consensus       747 ------------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~  802 (829)
                                              +.++.|-..+|.++..+-+++++.....+++.+.+|+..-.... .+.|+.|++++
T Consensus       276 ~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~-~~~DF~EGvRA  354 (401)
T KOG1684|consen  276 NTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRML-MRGDFCEGVRA  354 (401)
T ss_pred             ccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh-hccchhhhhhh
Confidence                                    11222557789999999999998888899999999999998887 67799999999


Q ss_pred             HH-hhc
Q psy11396        803 YF-DKS  807 (829)
Q Consensus       803 ~~-~k~  807 (829)
                      .+ .|.
T Consensus       355 ~LIDKd  360 (401)
T KOG1684|consen  355 VLIDKD  360 (401)
T ss_pred             eeecCC
Confidence            66 544

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.88  E-value=2.9e-21  Score=217.88  Aligned_cols=271  Identities=17%  Similarity=0.208  Sum_probs=192.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv  280 (829)
                      ..|+.+|+++||+|+|+++++|+    +|++|+....+.                 .....+..++..+|+..  |.++|
T Consensus        72 ~eLa~eA~~~AL~dAgl~~~dID----~vv~G~~~~~~~-----------------~~~~~~r~~a~~~Gl~~~~pa~~V  130 (452)
T PLN02287         72 DDLLAPVLKAVVEKTGLNPSEVG----DIVVGTVLAPGS-----------------QRANECRMAAFYAGFPETVPVRTV  130 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCccc-----------------ccchHHHHHHHHCCCCCCcceEEE
Confidence            56899999999999999999999    788885533221                 01122335667779864  88999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH---------------------------HHHHcCCC----
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI---------------------------KMSKSGML----  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~---------------------------~~~~~g~l----  329 (829)
                      +.+|+||+.|+..|+++|++|.+|++||+|+|.+.......                           ...+.|..    
T Consensus       131 ~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~l  210 (452)
T PLN02287        131 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQ  210 (452)
T ss_pred             eccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHH
Confidence            99999999999999999999999999999999875422100                           00000000    


Q ss_pred             -------------CCC-CCCC---------------------CCCCC---------------------------CCCccc
Q psy11396        330 -------------SPD-GHCY---------------------SFDQR---------------------------ANGFVP  347 (829)
Q Consensus       330 -------------s~~-~~~~---------------------pfd~~---------------------------~~G~~~  347 (829)
                                   .+. +..+                     +++.+                           .+...+
T Consensus       211 a~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~  290 (452)
T PLN02287        211 DQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQV  290 (452)
T ss_pred             HHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCc
Confidence                         011 1110                     11110                           244678


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD  427 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD  427 (829)
                      +|||+++||++++.|++++.+|++++.+++....  .   ..+...+...++++||++||++|+|||++|.|..++..  
T Consensus       291 sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~--~---~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~--  363 (452)
T PLN02287        291 SDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGV--D---PAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQ--  363 (452)
T ss_pred             CCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccC--C---CccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHH--
Confidence            9999999999999999999999999999774321  1   12234456789999999999999999999999333221  


Q ss_pred             hHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccc
Q psy11396        428 PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKC  507 (829)
Q Consensus       428 ~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~  507 (829)
                        |...+. .|+   ....++++++.+..+|||.||||+.+++.++++|++.                            
T Consensus       364 --~l~~~e-~lG---~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~----------------------------  409 (452)
T PLN02287        364 --FVYCCK-KLG---LDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR----------------------------  409 (452)
T ss_pred             --HHHHHH-HcC---CCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc----------------------------
Confidence              222222 233   1233566777777789999999999999999999761                            


Q ss_pred             ccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        508 KSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       508 ~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                            .+.-++++++...-||.-.++|||....
T Consensus       410 ------~~~~~~gl~~~c~ggG~g~a~~ie~~~~  437 (452)
T PLN02287        410 ------GKDCRFGVVSMCIGTGMGAAAVFERGDS  437 (452)
T ss_pred             ------CCCCCeeEEEEccccCceeEEEEEecCc
Confidence                  0002568888888899999999998754

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.88  E-value=1.2e-21  Score=218.50  Aligned_cols=264  Identities=15%  Similarity=0.199  Sum_probs=194.2

Q ss_pred             HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ..|+.++.+++|+ |+|+++++|+    .+++|.....                 +.....++..++..+|+.  -|+++
T Consensus        26 ~~L~~~a~~~al~~~a~i~~~~Id----~v~~G~~~~~-----------------~~~~~~~ar~~~~~~Gl~~~~p~~~   84 (400)
T TIGR02430        26 DDLAAVPIKALLARNPQLDWAAID----DVIYGCANQA-----------------GEDNRNVARMAALLAGLPVSVPGTT   84 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccc-----------------ccccccHHHHHHHHcCCCCCCceEE
Confidence            4588999999999 6899999998    7888744211                 011123555688899996  49999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH-------H---------------------H-HH------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-------I---------------------K-MS------  324 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-------~---------------------~-~~------  324 (829)
                      |+++|+||+.|+..|+++|++|++|++||||+|+++.....       .                     . +.      
T Consensus        85 V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~  164 (400)
T TIGR02430        85 VNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPE  164 (400)
T ss_pred             eechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHHH
Confidence            99999999999999999999999999999999988653210       0                     0 00      


Q ss_pred             -------HcCC-------------------------------------------CCCCCCCC-------------CCC--
Q psy11396        325 -------KSGM-------------------------------------------LSPDGHCY-------------SFD--  339 (829)
Q Consensus       325 -------~~g~-------------------------------------------ls~~~~~~-------------pfd--  339 (829)
                             +.|.                                           +.++...|             .|+  
T Consensus       165 ~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~  244 (400)
T TIGR02430       165 TAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPD  244 (400)
T ss_pred             HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCC
Confidence                   0000                                           00000000             011  


Q ss_pred             ---CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        340 ---QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       340 ---~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                         ...+.+.++|||+++||++++.|+++|.+++++|+|++.......     +...+...++++||+++|++|+||||+
T Consensus       245 g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DID~~  319 (400)
T TIGR02430       245 GTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPR-----IMGIGPVPATQKLLARAGLSIDQFDVI  319 (400)
T ss_pred             CCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCc-----cccchHHHHHHHHHHHhCCCHHHCCCc
Confidence               012335679999999999999999999999999999988753221     233456789999999999999999999


Q ss_pred             EecCCCCCCCChHHHHH--HHHHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396        417 EAHGTGTKLGDPIEFEA--LCESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE  492 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~A--l~~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~  492 (829)
                      |.|       |..+.+.  ..+.|+-.   ....||+..++.  +|||.||+|+.+++.++.+|+..             
T Consensus       320 ei~-------D~f~~~~l~~~e~lG~~---~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~-------------  376 (400)
T TIGR02430       320 ELN-------EAFAAQALAVLRELGLA---DDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS-------------  376 (400)
T ss_pred             ccC-------cHHHHHHHHHHHHcCCC---CCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc-------------
Confidence            977       6655444  44556521   122689999986  79999999999999999999761             


Q ss_pred             cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                             ..++.+++...-||.-.++|||.
T Consensus       377 -----------------------~~~~g~~~~c~~gG~g~a~~~e~  399 (400)
T TIGR02430       377 -----------------------GGRYALCTMCIGVGQGIALAIER  399 (400)
T ss_pred             -----------------------CCCEEEEEEccccChhhEEEEEe
Confidence                                   13467888888889999999985

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.88  E-value=4.6e-21  Score=214.56  Aligned_cols=263  Identities=17%  Similarity=0.226  Sum_probs=188.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+++++||+|||+++++++    +|++|.....+               .   ....+..++..+|+.  -|.++|
T Consensus        26 ~~L~~~a~~~al~dAgl~~~~ID----~vv~g~~~~~~---------------~---~~~~~~~~~~~~Gl~~~~p~~~v   83 (394)
T PLN02644         26 TELGSIAIQAALERAGVDPALVQ----EVFFGNVLSAN---------------L---GQAPARQAALGAGLPPSTICTTV   83 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCcCC---------------c---CCcHHHHHHHhcCCCCCCceEEE
Confidence            56899999999999999999999    78887432111               0   011334577888885  378899


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---------------H-----------------H------H
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---------------H-----------------I------K  322 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------~-----------------~------~  322 (829)
                      +.+|+|++.|+.+|+++|++|++|++||+|+|.++....               .                 .      .
T Consensus        84 ~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~  163 (394)
T PLN02644         84 NKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELC  163 (394)
T ss_pred             eccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHH
Confidence            999999999999999999999999999999997742110               0                 0      0


Q ss_pred             HHHcCCCC-----------------CC-CCCC--------------C---CC---------------------------C
Q psy11396        323 MSKSGMLS-----------------PD-GHCY--------------S---FD---------------------------Q  340 (829)
Q Consensus       323 ~~~~g~ls-----------------~~-~~~~--------------p---fd---------------------------~  340 (829)
                      +.+.|...                 +. +..+              |   ++                           .
T Consensus       164 ~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt  243 (394)
T PLN02644        164 ADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVT  243 (394)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEe
Confidence            00000000                 00 0100              0   10                           0


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      ..+...++||++++||++++.|++++.+++++|+|++...+.....     ......+++++|+++|++|+|||++|+| 
T Consensus       244 ~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~-----~~~~~~a~~~al~~Agi~~~Did~~Ei~-  317 (394)
T PLN02644        244 AGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELF-----TTAPALAIPKALKHAGLEASQVDYYEIN-  317 (394)
T ss_pred             ccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCccc-----chhHHHHHHHHHHHcCCCHHHCCEEEeC-
Confidence            0235667999999999999999999999999999999876542111     1223469999999999999999999998 


Q ss_pred             CCCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCC
Q psy11396        421 TGTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN  498 (829)
Q Consensus       421 tgt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~  498 (829)
                            |..+.+.+  .+.|+-   ...+++++..+..+|||.||+|+.++++++++|+..                   
T Consensus       318 ------d~f~~~~l~~~e~lg~---~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~-------------------  369 (394)
T PLN02644        318 ------EAFSVVALANQKLLGL---DPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK-------------------  369 (394)
T ss_pred             ------cHHHHHHHHHHHHhCC---CccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc-------------------
Confidence                  55544433  344542   123456666666779999999999999999999762                   


Q ss_pred             CCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                       ..++.+++.++-||...++|||.
T Consensus       370 -----------------~~~~g~~~~~~~gg~g~a~~~e~  392 (394)
T PLN02644        370 -----------------NGKYGVAGICNGGGGASAIVVEL  392 (394)
T ss_pred             -----------------CCCeEEEEEeccCCceeEEEEEe
Confidence                             12467777788889999999985

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.88  E-value=4e-21  Score=215.42  Aligned_cols=284  Identities=16%  Similarity=0.208  Sum_probs=189.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv~  281 (829)
                      ..|+.+|+++||+|||+++++++    ++++|+...++..   .           ....  +..+...++++ .|.++|+
T Consensus        23 ~eL~~eA~~~AL~dAgl~~~dId----~vi~g~~~~~~~~---~-----------~~~~--~~~~~~~~gl~~~p~~~v~   82 (389)
T PRK07516         23 ESLIVRVAREALAHAGIAAGDVD----GIFLGHFNAGFSP---Q-----------DFPA--SLVLQADPALRFKPATRVE   82 (389)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCccc---c-----------ccch--hHHHHHhcCCCCCceeeec
Confidence            56899999999999999999998    8888865333210   0           0000  11122344664 4889999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH--------HHHH------cCC----------------CC-
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--------KMSK------SGM----------------LS-  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~--------~~~~------~g~----------------ls-  330 (829)
                      ++|+|++.||..|+++|++|++|++||+|+|.+.......        .+..      .+.                ++ 
T Consensus        83 ~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~  162 (389)
T PRK07516         83 NACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQS  162 (389)
T ss_pred             cccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCH
Confidence            9999999999999999999999999999999865321100        0000      000                00 


Q ss_pred             -----------------CCCC-CCCCCC------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEE
Q psy11396        331 -----------------PDGH-CYSFDQ------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIK  374 (829)
Q Consensus       331 -----------------~~~~-~~pfd~------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~  374 (829)
                                       |... .+|++.                  ..+.+.++|||+++||.+++.|++.+.  +++|+
T Consensus       163 e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~--~v~i~  240 (389)
T PRK07516        163 DALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR--AVRFR  240 (389)
T ss_pred             HHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC--CEEEE
Confidence                             1000 011111                  134467899999999999999988753  56899


Q ss_pred             EeeeecCCCCCCCCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHH--------HHh-cccCCC
Q psy11396        375 GWGVNQDGKTNGITAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALC--------ESF-NKFSYH  444 (829)
Q Consensus       375 g~~~~~dg~~~~~~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~--------~~~-~~~~~~  444 (829)
                      |++...+........| ...+...++++||+++|++|+|||++|.|+++|.. .....+++.        +.+ .+....
T Consensus       241 g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~~~~~~~g~~~~  319 (389)
T PRK07516        241 ARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQGARAIREGWTAK  319 (389)
T ss_pred             EEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCchHHHHHCCCccC
Confidence            9998877544322222 34667789999999999999999999999999975 222233321        011 111222


Q ss_pred             CCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEE
Q psy11396        445 KNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI  522 (829)
Q Consensus       445 ~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v  522 (829)
                      .+.+||+...+.  +|||.||+|+.+++.+++||+...=..+                             -...+++++
T Consensus       320 ~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~ag~rQ-----------------------------v~~a~~~l~  370 (389)
T PRK07516        320 DGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQ-----------------------------IPGAKLAGV  370 (389)
T ss_pred             CCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCccCCc-----------------------------CCchheeee
Confidence            345677665554  5999999999999999999998421110                             113567899


Q ss_pred             eccC-CCCceEEEEeee
Q psy11396        523 NSFG-FSGTNAHIVLME  538 (829)
Q Consensus       523 ~s~G-~gG~na~~vl~e  538 (829)
                      .+.| .+.+++.+||+.
T Consensus       371 ~~~gg~~~~~~~~vl~~  387 (389)
T PRK07516        371 FNMGGAAVANYVSILER  387 (389)
T ss_pred             eccCcccceEEEEEEEe
Confidence            9887 555566666653

>PRK05790 putative acyltransferase; Provisional

Probab=99.88  E-value=1.8e-21  Score=218.57  Aligned_cols=263  Identities=17%  Similarity=0.206  Sum_probs=189.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+|+++||+|||+++++|+    ++++|+.....                  .....+..+...+|+.  .|.++|
T Consensus        27 ~~La~~A~~~AL~dAgl~~~dID----~vi~g~~~~~~------------------~~~~~~~~~~~~~gl~~~~~~~~v   84 (393)
T PRK05790         27 VELGAIVIKAALERAGVPPEQVD----EVIMGQVLQAG------------------AGQNPARQAALKAGLPVEVPALTI   84 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----eEEEEEecCCC------------------CCCcHHHHHHHHcCCCCCCceeee
Confidence            56899999999999999999999    78887543210                  0011222345556774  489999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---------------H-HHH--H-HcCCC------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---------------H-IKM--S-KSGML------------  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------~-~~~--~-~~g~l------------  329 (829)
                      +.+|+|++.||..|+++|++|.+|++||+|+|.++....               . ..+  . ..+..            
T Consensus        85 ~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y  164 (393)
T PRK05790         85 NKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENL  164 (393)
T ss_pred             cccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHH
Confidence            999999999999999999999999999999997632110               0 000  0 00000            


Q ss_pred             ------C-------------------CCCCC----CC----------------------------------CCC-----C
Q psy11396        330 ------S-------------------PDGHC----YS----------------------------------FDQ-----R  341 (829)
Q Consensus       330 ------s-------------------~~~~~----~p----------------------------------fd~-----~  341 (829)
                            +                   ..+..    .|                                  |+.     .
T Consensus       165 ~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~  244 (393)
T PRK05790        165 AEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTA  244 (393)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeC
Confidence                  0                   00000    01                                  110     0


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      .+.+.++|||+++||++++.|++.+.+++++|.|++.......     +...+...++++||+++|++|+|||++|+|  
T Consensus       245 ~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~--  317 (393)
T PRK05790        245 GNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPA-----IMGIGPVPAIRKALEKAGWSLADLDLIEIN--  317 (393)
T ss_pred             CcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCC-----ccchhHHHHHHHHHHHcCCCHHHCCEEEeC--
Confidence            1446789999999999999999999999999999988753221     122345689999999999999999999998  


Q ss_pred             CCCCCChHHHHH--HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        422 GTKLGDPIEFEA--LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       422 gt~~gD~~E~~A--l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                           |..+...  ..+.|+-   ...++++++.+...||+.||+|+.+++.++++|+..                    
T Consensus       318 -----d~f~~~~l~~~e~lg~---~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~--------------------  369 (393)
T PRK05790        318 -----EAFAAQALAVEKELGL---DPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR--------------------  369 (393)
T ss_pred             -----cHHHHHHHHHHHHhCC---ChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc--------------------
Confidence                 5555443  2334442   123566777777789999999999999999999872                    


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                      ..++++++..|=||..+++|||.
T Consensus       370 ----------------~~~~gl~~~~~~~g~g~~~~~e~  392 (393)
T PRK05790        370 ----------------GAKKGLATLCIGGGQGVALIVER  392 (393)
T ss_pred             ----------------CCCeEEEEEeccCCceeEEEEEc
Confidence                            12678999999999999999985

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.88  E-value=2.2e-21  Score=216.57  Aligned_cols=242  Identities=15%  Similarity=0.200  Sum_probs=173.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+++++||+|+|+++++++    .+++|+...+..                 ....++..++...|+.  -|.++|
T Consensus        27 ~eL~~~a~~~al~~agi~~~~Id----~v~~G~~~~~~~-----------------~~~~~ar~~~~~~Glp~~~p~~tV   85 (401)
T PRK08131         27 DDLAATVIRRLLEKSGFPGDDIE----DVILGCTNQAGE-----------------DSRNVARNALLLAGLPVTVPGQTV   85 (401)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-----------------ccccHHHHHHHhcCCCCCCceeee
Confidence            56889999999999999999999    788885432110                 0112344577778885  589999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH------------HHHHH--------------cCC------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH------------IKMSK--------------SGM------  328 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------------~~~~~--------------~g~------  328 (829)
                      +++|+||+.|+..|+++|++|++|++||||+|+++.....            ..+..              ...      
T Consensus        86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~  165 (401)
T PRK08131         86 NRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPET  165 (401)
T ss_pred             echhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccCCHHHH
Confidence            9999999999999999999999999999999987643210            00000              000      


Q ss_pred             ---------CC-------------------CCCCC----CCC-------------CC-----------------------
Q psy11396        329 ---------LS-------------------PDGHC----YSF-------------DQ-----------------------  340 (829)
Q Consensus       329 ---------ls-------------------~~~~~----~pf-------------d~-----------------------  340 (829)
                               ++                   +.+..    .|.             +.                       
T Consensus       166 ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f~~g  245 (401)
T PRK08131        166 GDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLFEGG  245 (401)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCCCCC
Confidence                     00                   00000    011             10                       


Q ss_pred             ---CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        341 ---RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       341 ---~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                         ..+.+.++|||+++||.+++.|++.+.+++++|.|++...+...     ....+...+++++|+++|++|+|||++|
T Consensus       246 ~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~a~~~agl~~~did~~e  320 (401)
T PRK08131        246 VVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR-----IMGIGPVEAIKKALARAGLTLDDMDIIE  320 (401)
T ss_pred             CccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCeeh
Confidence               01556789999999999999999999999999999998865322     1123567899999999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhc
Q psy11396        418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKH  478 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~  478 (829)
                      .|.+++..    |...+ +.++-   .....||+..++.  +|||.||+|+.+++.++++|+.
T Consensus       321 i~d~Fa~~----~l~~~-e~lg~---~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~  375 (401)
T PRK08131        321 INEAFASQ----VLGCL-KGLGV---DFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR  375 (401)
T ss_pred             hccHHHHH----HHHHH-HHcCC---CCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence            99554432    22222 23331   1123678888885  5999999999999999999976

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.88  E-value=2.8e-21  Score=215.72  Aligned_cols=263  Identities=16%  Similarity=0.200  Sum_probs=195.1

Q ss_pred             HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ..|+.++.+++|+ |+|+++++++    .|++|+.....                 .....++..++...|+.  -|+++
T Consensus        27 ~~L~~~a~~~al~~~agi~~~~Id----~v~~G~~~~~~-----------------~~~~~~ar~~~~~~Gl~~~vP~~t   85 (401)
T PRK09050         27 DDLGAVPLKALMARNPGVDWEAVD----DVIYGCANQAG-----------------EDNRNVARMSALLAGLPVSVPGTT   85 (401)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC----EEEEEeccccc-----------------cccchHHHHHHHHcCCCCCCceEE
Confidence            4588999999999 6899999998    78888542111                 11123455688889993  59999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH-----HH------------------------HH------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-----IK------------------------MS------  324 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-----~~------------------------~~------  324 (829)
                      |+++|+||+.|+..|+++|++|++|++||||+|+++.....     ..                        +.      
T Consensus        86 V~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~  165 (401)
T PRK09050         86 INRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPE  165 (401)
T ss_pred             EecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHHH
Confidence            99999999999999999999999999999999988643210     00                        00      


Q ss_pred             -------HcCCCC---------------------C-----------------------CCCCC------------C-CCC
Q psy11396        325 -------KSGMLS---------------------P-----------------------DGHCY------------S-FDQ  340 (829)
Q Consensus       325 -------~~g~ls---------------------~-----------------------~~~~~------------p-fd~  340 (829)
                             +.| ++                     +                       +...|            | |+.
T Consensus       166 ~ae~~a~~~g-isre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~  244 (401)
T PRK09050        166 TAENVAEDYN-ISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRP  244 (401)
T ss_pred             HHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccC
Confidence                   000 00                     0                       11111            1 111


Q ss_pred             -----CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396        341 -----RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       341 -----~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~  415 (829)
                           ..+.+.++|||+++||++++.|+++|.+++++|+|++.......     ....+...+++++|++||++|+|||+
T Consensus       245 ~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~  319 (401)
T PRK09050        245 DGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPR-----IMGIGPAPATRKLLARLGLTIDQFDV  319 (401)
T ss_pred             CCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCc
Confidence                 12335679999999999999999999999999999988754322     12234578999999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHHH--HHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCC
Q psy11396        416 LEAHGTGTKLGDPIEFEALC--ESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN  491 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al~--~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~  491 (829)
                      +|.|       |..+.+.+.  +.|+-   .....||+..++.  +|||.||+|+..++.++.+|+.+            
T Consensus       320 ~ei~-------D~f~~~~l~~~e~lg~---~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~------------  377 (401)
T PRK09050        320 IELN-------EAFAAQGLAVLRQLGL---ADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT------------  377 (401)
T ss_pred             cccC-------cHhHHHHHHHHHHcCC---CCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc------------
Confidence            9987       666665543  34441   1123689999997  69999999999999999999761            


Q ss_pred             ccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       492 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                              ..++++++..+-||.-.++|||.
T Consensus       378 ------------------------~~~~g~~~~c~~gG~g~a~~~e~  400 (401)
T PRK09050        378 ------------------------GGRYALCTMCIGVGQGIALAIER  400 (401)
T ss_pred             ------------------------CCCeEEEEEcccccceeEEEEEe
Confidence                                    23568888888999999999985

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.88  E-value=3e-21  Score=216.10  Aligned_cols=265  Identities=17%  Similarity=0.230  Sum_probs=188.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv  280 (829)
                      ..|+.+++++||+|||+++++|+    .|++|+...++.                  ...++...+..+|+  +.|+++|
T Consensus        32 ~eL~~~a~~~aL~~Agi~~~dID----~vi~G~~~~~~~------------------~~~~~~~~~l~ag~~~~~p~~~V   89 (397)
T PRK06954         32 PQLGAAAIAAAVERAGLKPEQID----EVVMGCVLPAGQ------------------GQAPARQAALGAGLPLSVGCTTV   89 (397)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc------------------chHHHHHHHHcCCCCCCccEeec
Confidence            56899999999999999999999    788885432211                  11123334444565  3588999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------HHHH--HHc-CCC------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------HIKM--SKS-GML------------  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------~~~~--~~~-g~l------------  329 (829)
                      +.+|+||+.|+..|+++|++|++|++||+|+|.++....                ...+  ... ..+            
T Consensus        90 ~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  169 (397)
T PRK06954         90 NKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEE  169 (397)
T ss_pred             cccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHH
Confidence            999999999999999999999999999999998763110                0000  000 000            


Q ss_pred             -------C-------------------CCCCC----CCCCC-------------------------------------CC
Q psy11396        330 -------S-------------------PDGHC----YSFDQ-------------------------------------RA  342 (829)
Q Consensus       330 -------s-------------------~~~~~----~pfd~-------------------------------------~~  342 (829)
                             +                   +.+..    .|+..                                     ..
T Consensus       170 ~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~~  249 (397)
T PRK06954        170 CAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTAA  249 (397)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEcc
Confidence                   0                   01100    11110                                     01


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +.+.++|||+++||++++.|++.|.+++++|.|++........     ...+...++++||+++|++|+|||++|.|.++
T Consensus       250 ~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~Did~~ei~d~f  324 (397)
T PRK06954        250 NSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK-----FTTAPVGAIRKLFEKNGWRAAEVDLFEINEAF  324 (397)
T ss_pred             ccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCccc-----ccchHHHHHHHHHHHcCCCHHHCCEEehhhHH
Confidence            2356799999999999999999999999999998765332211     11245789999999999999999999999555


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                      +.    .|..++... +   ....++++++.+..+|||.||+|+.+++.++++|+..                       
T Consensus       325 a~----~~l~~~e~l-g---~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~-----------------------  373 (397)
T PRK06954        325 AV----VTMAAMKEH-G---LPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR-----------------------  373 (397)
T ss_pred             HH----HHHHHHHHh-C---CCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc-----------------------
Confidence            53    244444433 2   1234577778888889999999999999999999761                       


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                   ..++.+++..+-||.-+++|||.
T Consensus       374 -------------~g~~~v~~~c~~gg~g~a~~~e~  396 (397)
T PRK06954        374 -------------GGKRGVASLCIGGGEATAMGIEL  396 (397)
T ss_pred             -------------CCCeEEEEEccccchhhEEEEEe
Confidence                         12457788888889999999984

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=4.3e-21  Score=215.27  Aligned_cols=267  Identities=15%  Similarity=0.173  Sum_probs=191.5

Q ss_pred             HHHHHHHHHHHHHHc-CCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        203 QRLFLQNCWTCIEDA-GYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dA-Gl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ..|+.+++++||+|+ |+++++|+    ++++|......              .   .....+..++..+|+.+ |+++|
T Consensus        28 ~eL~~~A~~~AL~da~gl~~~dID----~vv~g~~~~~~--------------~---~g~~~~~~~a~~lGl~~~p~~~v   86 (406)
T PRK07851         28 DDLAAQMVRAALDKVPALDPTDID----DLMLGCGLPGG--------------E---QGFNMARVVAVLLGYDFLPGTTV   86 (406)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCC----EEEEEcccccc--------------c---ccCCHHHHHHHHcCCCCCCeeee
Confidence            568899999999997 99999999    78887432110              0   01124567889999975 88999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-------------HH---------------HHHH-c-----
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-------------HI---------------KMSK-S-----  326 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------~~---------------~~~~-~-----  326 (829)
                      +.+|+||+.|+..|+++|++|.+|++||+|+|.+.....             ..               .+.. .     
T Consensus        87 ~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  166 (406)
T PRK07851         87 NRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLL  166 (406)
T ss_pred             eccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccccccccc
Confidence            999999999999999999999999999999997532110             00               0000 0     


Q ss_pred             -----CC------------CC-------------------CCC--C-------------------CC-CCCC--------
Q psy11396        327 -----GM------------LS-------------------PDG--H-------------------CY-SFDQ--------  340 (829)
Q Consensus       327 -----g~------------ls-------------------~~~--~-------------------~~-pfd~--------  340 (829)
                           .+            ++                   ..+  .                   .+ +++.        
T Consensus       167 ~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~~  246 (406)
T PRK07851        167 PDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLKP  246 (406)
T ss_pred             ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCCC
Confidence                 00            00                   000  0                   00 0110        


Q ss_pred             ---------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy11396        341 ---------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN  411 (829)
Q Consensus       341 ---------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~  411 (829)
                               ..+.+.++|||+++||++++.|++.+.+++++|+|++...+..     .+...+...++++||++||++|+
T Consensus       247 v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~  321 (406)
T PRK07851        247 VFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP-----EIMGLGPVEASKQALARAGMSID  321 (406)
T ss_pred             ccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC-----CccchhHHHHHHHHHHHhCCCHH
Confidence                     1134557999999999999999999999999999998865422     12233567899999999999999


Q ss_pred             CccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCC
Q psy11396        412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN  491 (829)
Q Consensus       412 dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~  491 (829)
                      |||++|.|.+.+..    |...++ .|+-   ...++++++.+..+|||.||+|+.+++.++++|+++            
T Consensus       322 did~~ei~d~f~~~----~l~~le-~lg~---~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~------------  381 (406)
T PRK07851        322 DIDLVEINEAFAAQ----VLPSAR-ELGI---DEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH------------  381 (406)
T ss_pred             HCCeehhhhHHHHH----HHHHHH-HhCC---CccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc------------
Confidence            99999998443321    222222 3331   123566777777789999999999999999999761            


Q ss_pred             ccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       492 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                                              ..++.+++..+-||+-.++|||..
T Consensus       382 ------------------------~~~~g~~~~~~~gg~g~a~~~e~~  405 (406)
T PRK07851        382 ------------------------DKTFGLETMCVGGGQGMAMVLERL  405 (406)
T ss_pred             ------------------------CCCeEEEEEccccChhhEEEEEec
Confidence                                    124688899999999999999964

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=1.1e-20  Score=212.24  Aligned_cols=266  Identities=17%  Similarity=0.246  Sum_probs=191.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+|+++||+|+|+++++++    .+++|+..+.+.                  ...++..++..+|+.  -|.++|
T Consensus        27 ~eLa~~A~~~AL~~agl~~~dID----~vv~g~~~~~~~------------------~~~~a~~va~~~Gl~~~~p~~~V   84 (404)
T PRK06205         27 EELAATVIRALVERTGIDPARID----DVIFGQGYPNGE------------------APAIGRVAALDAGLPVTVPGMQL   84 (404)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------CChHHHHHHHHcCCCCCCceeeh
Confidence            56889999999999999999999    888886543321                  122345678888986  489999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH----------------HHHHH------------H-HcCC---
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD----------------IHIKM------------S-KSGM---  328 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~----------------~~~~~------------~-~~g~---  328 (829)
                      +.+|+||+.|+..|+++|++|.+|++||+|+|.++...                .+..+            . ..++   
T Consensus        85 ~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~  164 (404)
T PRK06205         85 DRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIET  164 (404)
T ss_pred             hhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHH
Confidence            99999999999999999999999999999999765311                00000            0 0000   


Q ss_pred             ---------CC--------------------------------------------CCCC------------CCC-C---C
Q psy11396        329 ---------LS--------------------------------------------PDGH------------CYS-F---D  339 (829)
Q Consensus       329 ---------ls--------------------------------------------~~~~------------~~p-f---d  339 (829)
                               ++                                            ++..            .+| |   +
T Consensus       165 a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~  244 (404)
T PRK06205        165 AENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQD  244 (404)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCC
Confidence                     00                                            0000            001 1   0


Q ss_pred             -----CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy11396        340 -----QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQ  414 (829)
Q Consensus       340 -----~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId  414 (829)
                           ...+...++|||+++||++++.|++.+.+++++|.|++...+....     ...+...++++||++||++|+|||
T Consensus       245 p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~Did  319 (404)
T PRK06205        245 PEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR-----MGIGPVPATEKALARAGLTLDDID  319 (404)
T ss_pred             CCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc-----ccccHHHHHHHHHHHcCCCHHHCC
Confidence                 1123345689999999999999999999999999999987553321     113557899999999999999999


Q ss_pred             EEEecCCCCCCCChHHHHHHH--HHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396        415 LLEAHGTGTKLGDPIEFEALC--ESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE  492 (829)
Q Consensus       415 ~ve~hgtgt~~gD~~E~~Al~--~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~  492 (829)
                      ++|.|       |....+.+.  +.|+-......+++++..+..+|||.||+|+..++.++.+|+..             
T Consensus       320 ~~ei~-------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~-------------  379 (404)
T PRK06205        320 LIELN-------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR-------------  379 (404)
T ss_pred             Eeeec-------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc-------------
Confidence            99998       444443332  23331110012456666666679999999999999999999762             


Q ss_pred             cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                             ..++++++..+-||.-.++|||.
T Consensus       380 -----------------------~~~~gl~~~c~~gg~g~a~~~e~  402 (404)
T PRK06205        380 -----------------------QARYGLETMCIGGGQGLAAVFER  402 (404)
T ss_pred             -----------------------CCCeEEEEEeccCChhhEEEEEe
Confidence                                   13578999999999999999985

>PRK08256 lipid-transfer protein; Provisional

Probab=99.87  E-value=4.7e-21  Score=214.97  Aligned_cols=278  Identities=16%  Similarity=0.182  Sum_probs=189.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+++++||+|||+++++++...+|++.+...                         ....+...+|+++ |+++|
T Consensus        22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-------------------------~~~~~~~~lGl~~~~~~~v   76 (391)
T PRK08256         22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-------------------------SGQRALYEVGMTGIPIVNV   76 (391)
T ss_pred             HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-------------------------hhHHHHHHcCCCCCCCccc
Confidence            467999999999999999999998444443332110                         0112456789988 99999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------HHHHH-------H-cCCCC------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------HIKMS-------K-SGMLS------------  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------~~~~~-------~-~g~ls------------  330 (829)
                      +++|+|++.||..|+++|++|++|++||+|+|.+.....          ...+.       . .+...            
T Consensus        77 ~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y  156 (391)
T PRK08256         77 NNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREH  156 (391)
T ss_pred             ccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHH
Confidence            999999999999999999999999999999998642100          00000       0 00100            


Q ss_pred             -------------------CCCCCCCCC---------------------CCCCCcccccceEEEEEccchhhhhCCCceE
Q psy11396        331 -------------------PDGHCYSFD---------------------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIY  370 (829)
Q Consensus       331 -------------------~~~~~~pfd---------------------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~  370 (829)
                                         ......|..                     ...+...++|||+++||.+++.|++.+.+++
T Consensus       157 ~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~  236 (391)
T PRK08256        157 MEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRA  236 (391)
T ss_pred             HHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCC
Confidence                               000001110                     0123356799999999999999998876788


Q ss_pred             EEEEEeeeecCCCCCCCC-C---C-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-h------
Q psy11396        371 CIIKGWGVNQDGKTNGIT-A---P-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-F------  438 (829)
Q Consensus       371 a~I~g~~~~~dg~~~~~~-~---p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~------  438 (829)
                      ++|.|++...+....... .   . .......+.+++|+++|++++|||++|+|.+++..    |...++.. |      
T Consensus       237 v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~----~l~~le~lg~~~~Ge~  312 (391)
T PRK08256        237 VEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSAN----ELLTYEALGLCPEGEA  312 (391)
T ss_pred             EEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHH----HHHHHHHcCCCCCCch
Confidence            999998877664322111 0   1 12345679999999999999999999999998754    44444332 1      


Q ss_pred             -----cccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccc
Q psy11396        439 -----NKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD  511 (829)
Q Consensus       439 -----~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~  511 (829)
                           .+.....+.+||+...+.+  |||.||+|+.+++.+++||+..--..+                           
T Consensus       313 ~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Q---------------------------  365 (391)
T PRK08256        313 EKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGARQ---------------------------  365 (391)
T ss_pred             HHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCcCCCc---------------------------
Confidence                 1122233567888888776  999999999999999999987421110                           


Q ss_pred             ccccCccEEEEeccCCCCceEEEEee
Q psy11396        512 IKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       512 ~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                        -...+++++++.|.|.++...||+
T Consensus       366 --v~~~~~~l~~~~G~~~~~~~~v~~  389 (391)
T PRK08256        366 --VEGARLALQHNLGLGGACVVTLYQ  389 (391)
T ss_pred             --CCccceEEEeccccceeEEEEEEe
Confidence              013468999999955555555554

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=4.2e-21  Score=215.11  Aligned_cols=268  Identities=20%  Similarity=0.207  Sum_probs=188.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeecc
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDT  282 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~~  282 (829)
                      ..|+.+++++||+|+|+++++++    .+++|+...++..             . .... ....+...++.+-|+++|++
T Consensus        33 ~~L~~~a~~~AL~~agl~~~dID----~vi~g~~~~~~~~-------------~-~~~~-~~~~l~a~~~~~~p~~~V~~   93 (394)
T PRK06445         33 EELAAMLINRLIEKTGIKPEEID----DIITGCALQVGEN-------------W-LYGG-RHPIFLARLPYNIPAMAVDR   93 (394)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----eeEEEeecCCCcc-------------c-ccHH-HHHHHHcCCCCCCcchhhhh
Confidence            45889999999999999999999    7788765432210             0 0000 01122333344569999999


Q ss_pred             chhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH-----------HHH---H---HHH-cCC-C-------------C
Q psy11396        283 ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD-----------IHI---K---MSK-SGM-L-------------S  330 (829)
Q Consensus       283 acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~-----------~~~---~---~~~-~g~-l-------------s  330 (829)
                      +|+||+.|+..|+++|++|.+|++||+|+|.++...           ...   .   +.. .+. +             +
T Consensus        94 ~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygit  173 (394)
T PRK06445         94 QCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIK  173 (394)
T ss_pred             hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999765211           000   0   000 000 0             0


Q ss_pred             -------------------CCCC------------------CCCCCC------------------------CCCCccccc
Q psy11396        331 -------------------PDGH------------------CYSFDQ------------------------RANGFVPGE  349 (829)
Q Consensus       331 -------------------~~~~------------------~~pfd~------------------------~~~G~~~gE  349 (829)
                                         +++.                  ..|...                        ..+.+.++|
T Consensus       174 re~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~D  253 (394)
T PRK06445        174 REEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNS  253 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCC
Confidence                               0000                  011100                        112456799


Q ss_pred             ceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChH
Q psy11396        350 GVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPI  429 (829)
Q Consensus       350 GaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~  429 (829)
                      ||+++||++++.|++++.+++++|+|++...+...     +...+...++++||+++|++|+||||+|.|.+++.    .
T Consensus       254 GAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~----~  324 (394)
T PRK06445        254 GASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPA-----IMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV----V  324 (394)
T ss_pred             ceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----hhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH----H
Confidence            99999999999999999999999999998764321     22345678999999999999999999999987764    3


Q ss_pred             HHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccc
Q psy11396        430 EFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKS  509 (829)
Q Consensus       430 E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~  509 (829)
                      |...++.. +-   ...++.++.-...+|||.||+|+.+++.++++|+.                               
T Consensus       325 ~l~~~e~l-g~---~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~-------------------------------  369 (394)
T PRK06445        325 VLYAIKEL-GL---DPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI-------------------------------  369 (394)
T ss_pred             HHHHHHHh-CC---CccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------------------
Confidence            66666544 21   12234444444446999999999999999999971                               


Q ss_pred             ccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        510 WDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       510 ~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                           +..++++++..+-||+.+++|||.
T Consensus       370 -----~~~~~gl~~~~~~gg~g~a~~~e~  393 (394)
T PRK06445        370 -----KGKDYGVATLCVGGGQGGAVVLER  393 (394)
T ss_pred             -----cCCCEEEEEEcccCChhhEEEEEc
Confidence                 123679999999999999999984

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.87  E-value=6.3e-21  Score=213.67  Aligned_cols=250  Identities=20%  Similarity=0.214  Sum_probs=183.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+|+++||+|||+++++++    ++++|+....+.                  ....+..++..+|+. .|.++|
T Consensus        16 ~~eL~~~A~~~Al~dagl~~~~Id----~vi~g~~~~~~~------------------~~~~a~~va~~lGl~~~~~~~v   73 (375)
T cd00829          16 PLELAAEAARAALDDAGLEPADID----AVVVGNAAGGRF------------------QSFPGALIAEYLGLLGKPATRV   73 (375)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccccccc------------------ccchHHHHHHHcCCCCcceeeE
Confidence            457899999999999999998888    888886533211                  123567899999994 589999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH---H------HHH---HcCCCC------------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH---I------KMS---KSGMLS------------------  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---~------~~~---~~g~ls------------------  330 (829)
                      +.+|+|++.++..|+++|++|++|++||+|+|.+......   .      .+.   ..+.+.                  
T Consensus        74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~  153 (375)
T cd00829          74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT  153 (375)
T ss_pred             eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999976543110   0      000   001110                  


Q ss_pred             -------------------CCC----------------CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEE
Q psy11396        331 -------------------PDG----------------HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG  375 (829)
Q Consensus       331 -------------------~~~----------------~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g  375 (829)
                                         |..                .+.|+. ..+...++||++++||++++.|++. .++++.|+|
T Consensus       154 t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g  231 (375)
T cd00829         154 TREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL-TDRPVWILG  231 (375)
T ss_pred             CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEE
Confidence                               000                001111 2355678999999999999999988 678899999


Q ss_pred             eeeecCCCCCCCCC--CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hc-----------cc
Q psy11396        376 WGVNQDGKTNGITA--PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FN-----------KF  441 (829)
Q Consensus       376 ~~~~~dg~~~~~~~--p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~-----------~~  441 (829)
                      ++..++........  ....+...++++||++||++++|||++|.|.+++..    +...+... |.           +.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~----~l~~~e~lGl~~~g~~~~~~~~g~  307 (375)
T cd00829         232 VGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIA----ELLALEDLGFCEKGEGGKLVREGD  307 (375)
T ss_pred             EEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCCchHHHHHCCC
Confidence            99988865532222  245677899999999999999999999999998864    44333322 11           11


Q ss_pred             CCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        442 SYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       442 ~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      ....+.+||+...+.+  |||.||+|+..++.++++|+..
T Consensus       308 ~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~  347 (375)
T cd00829         308 TAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE  347 (375)
T ss_pred             ccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence            1123346788777775  9999999999999999999874

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=3.8e-21  Score=214.77  Aligned_cols=263  Identities=17%  Similarity=0.196  Sum_probs=188.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+|+++||+|+|+++++|+    .+|+|+..+..                 . ...++..++..+|+.  -|+++|
T Consensus        27 ~eLa~~A~~~aL~~agl~~~dID----~vi~g~~~~~~-----------------~-~~~~~~~~~~~~Gl~~~~p~~~V   84 (393)
T PRK08235         27 TELGGIAIKEALERANVSAEDVE----EVIMGTVLQGG-----------------Q-GQIPSRQAARAAGIPWEVQTETV   84 (393)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC-----------------C-CCCHHHHHHHHcCCCCCcceeeh
Confidence            45889999999999999999999    88888653210                 0 012334567888884  589999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-------------HHHH---cC----C----C-------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-------------KMSK---SG----M----L-------  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-------------~~~~---~g----~----l-------  329 (829)
                      +++|+||+.|++.|+++|++|.+|++||+|+|.++......             .+..   .+    .    +       
T Consensus        85 ~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~  164 (393)
T PRK08235         85 NKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEV  164 (393)
T ss_pred             hhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHH
Confidence            99999999999999999999999999999999876532100             0000   00    0    0       


Q ss_pred             ------C--------------------------------------------CCCCCCC-------------CC-----CC
Q psy11396        330 ------S--------------------------------------------PDGHCYS-------------FD-----QR  341 (829)
Q Consensus       330 ------s--------------------------------------------~~~~~~p-------------fd-----~~  341 (829)
                            +                                            ++...|+             |+     ..
T Consensus       165 ~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt~  244 (393)
T PRK08235        165 AKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITA  244 (393)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEec
Confidence                  0                                            0000110             00     01


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      .+.+.++|||+++||++++.|++.+.+++++|.|++...+.... .    ......++++||+++|++|+|||++|.|  
T Consensus       245 ~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-~----~~~~~~a~~~al~~agl~~~did~~e~~--  317 (393)
T PRK08235        245 GNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-F----PRTPGYAINALLEKTGKTVEDIDLFEIN--  317 (393)
T ss_pred             cccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-h----cchHHHHHHHHHHHhCCCHHHCCeehhc--
Confidence            13355699999999999999999999999999998765432221 1    1233579999999999999999999998  


Q ss_pred             CCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        422 GTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       422 gt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                           |..+.+.+  .+.|+-   ...++++++.+..+|||.||+|+.+++.++++|+.+                    
T Consensus       318 -----d~f~~~~l~~~e~lg~---~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~--------------------  369 (393)
T PRK08235        318 -----EAFAAVALASTEIAGI---DPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR--------------------  369 (393)
T ss_pred             -----chhHHHHHHHHHHhCC---CcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc--------------------
Confidence                 44433322  234442   123566777777789999999999999999999762                    


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                      ..++.+.+.+.-||.-.++|||.
T Consensus       370 ----------------~~~~g~~~~c~~gG~g~a~~~e~  392 (393)
T PRK08235        370 ----------------GGGIGIAAICSGGGQGDAVLIEV  392 (393)
T ss_pred             ----------------CCCeEEEEEcccccceEEEEEEe
Confidence                            12357777778889999999885

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.86  E-value=1.2e-20  Score=209.88  Aligned_cols=267  Identities=14%  Similarity=0.200  Sum_probs=185.5

Q ss_pred             HHHHHHHHHHHHHH-cCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        203 QRLFLQNCWTCIED-AGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~d-AGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ..|+.+++++||++ +|+++++|+    .+|+|......                 .....++..++...|+.  -|+++
T Consensus        26 ~~L~~~a~~~al~~~agl~~~~Id----~v~~G~~~~~~-----------------~~g~~~ar~~~~~~g~~~~~p~~t   84 (385)
T TIGR02445        26 EDLSAHLMSKLLARNPKVDPAEVE----DIYWGCVQQTL-----------------EQGFNIARNAALLAQIPHTSAAVT   84 (385)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHcC----EEEEecccccc-----------------cccchHHHHHHHHCCCCCCcchhh
Confidence            56889999999995 699999999    78888542100                 00112444555566653  47799


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---------H----------HH------HHHcCC------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---------H----------IK------MSKSGM------  328 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------~----------~~------~~~~g~------  328 (829)
                      |+.+|+||+.|++.|+++|++|++|++||||+|.++....         +          +.      ..+.|.      
T Consensus        85 V~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d  164 (385)
T TIGR02445        85 VNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQD  164 (385)
T ss_pred             hhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHHH
Confidence            9999999999999999999999999999999998753211         0          00      000000      


Q ss_pred             ------------------C-------------------CCCCCCCC-------------CCC------CCCCcccccceE
Q psy11396        329 ------------------L-------------------SPDGHCYS-------------FDQ------RANGFVPGEGVG  352 (829)
Q Consensus       329 ------------------l-------------------s~~~~~~p-------------fd~------~~~G~~~gEGaa  352 (829)
                                        +                   .++...|+             |+.      ..+.+.++||++
T Consensus       165 ~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa  244 (385)
T TIGR02445       165 AFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGAS  244 (385)
T ss_pred             HHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceE
Confidence                              0                   01111110             111      134466799999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE  432 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~  432 (829)
                      ++||++++.|++++.+++++|+|++.+.....  .   ...+...+++++|+++|++|+||||+|+|.+++..    |..
T Consensus       245 avvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~--~---~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~----~l~  315 (385)
T TIGR02445       245 AMLVMSEQRANELGLKPRARIRSMAVAGCDPS--I---MGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ----ALP  315 (385)
T ss_pred             EEEEecHHHHHHCCCCeeEEEEEEEEcCCCCc--c---cchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHH----HHH
Confidence            99999999999999999999999998753221  1   11245679999999999999999999999776643    444


Q ss_pred             HHHHHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396        433 ALCESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW  510 (829)
Q Consensus       433 Al~~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~  510 (829)
                      .++. ++- . .....+++...+.  +|||.||+|+..++.++..|++                                
T Consensus       316 ~~e~-lg~-~-~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~--------------------------------  360 (385)
T TIGR02445       316 CLKD-LGL-L-DKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ--------------------------------  360 (385)
T ss_pred             HHHH-cCC-C-CCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh--------------------------------
Confidence            4443 231 0 1111345444444  5999999999999988855543                                


Q ss_pred             cccccCccEEEEeccCCCCceEEEEeee
Q psy11396        511 DIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                          ...+++++++.|=||.-.++|||.
T Consensus       361 ----~~~~~Gl~~~~~g~g~g~a~~~e~  384 (385)
T TIGR02445       361 ----KDATFGLATMCIGLGQGIATVFER  384 (385)
T ss_pred             ----cCCCeEEEEEecccChhheEEEEe
Confidence                123578899998899999999985

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=2.7e-20  Score=207.77  Aligned_cols=252  Identities=15%  Similarity=0.101  Sum_probs=179.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+|+++||+|||+++++||    ++++++. +++.              .+.  ...+..++..+|+++ |.+.|+
T Consensus        25 ~eL~~eAa~~Al~dAgl~~~dID----~iv~~~~-~~~~--------------~~~--~~~~~~va~~LGl~~~~~~~v~   83 (386)
T PRK08313         25 AGLVREAIDRALADAGLTWDDID----AVVVGKA-PDFF--------------EGV--MMPELFLADALGATGKPLIRVH   83 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-cccc--------------ccc--cCchHHHHHhcCCCCCceEEEe
Confidence            46899999999999999999998    8888752 2221              000  112357889999975 888999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH--------------------------HHHHHHcCCCC-----
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI--------------------------HIKMSKSGMLS-----  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--------------------------~~~~~~~g~ls-----  330 (829)
                      ++|+|+..++..|+++|++|.+|.+||+|+|.+.....                          ..++...|...     
T Consensus        84 ~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~  163 (386)
T PRK08313         84 TAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAM  163 (386)
T ss_pred             ccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHH
Confidence            99999999999999999999999999999997543200                          00111111110     


Q ss_pred             ------CCCCCCC--------CC--------------CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCC
Q psy11396        331 ------PDGHCYS--------FD--------------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDG  382 (829)
Q Consensus       331 ------~~~~~~p--------fd--------------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg  382 (829)
                            ......|        ++              ..-+.+.++|||+++||.+.+.|++.+.++.++|+|++..++.
T Consensus       164 vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~  243 (386)
T PRK08313        164 VAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEP  243 (386)
T ss_pred             HHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecC
Confidence                  0011111        11              1134466799999999999999998877888899999987664


Q ss_pred             CCCC-CCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHHHHHH------------hcccCCCCCc
Q psy11396        383 KTNG-ITAPNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEALCES------------FNKFSYHKNF  447 (829)
Q Consensus       383 ~~~~-~~~p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~Al~~~------------~~~~~~~~~~  447 (829)
                      .... .......+...++++||++||++  ++|||++|.|.++|..    |...+...            -.+.....+.
T Consensus       244 ~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~----~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~  319 (386)
T PRK08313        244 LAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWF----EPMWLENLGFAPEGEGWKLTEAGETAIGGR  319 (386)
T ss_pred             cccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHH----HHHHHHHcCCCCCCchHHHHHCCCcCCCCC
Confidence            3211 11222456678999999999998  6999999999998854    44333222            1122233456


Q ss_pred             cccCCcccCc-CcchhhhhHHHHHHHHHHHhcC
Q psy11396        448 CALGSVKSNI-GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       448 ~~v~s~k~~~-GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      +||+...+.+ ||+.||+|+.+++++++||+..
T Consensus       320 ~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~  352 (386)
T PRK08313        320 LPVNPSGGVLSSNPIGASGMIRFAEAALQVMGK  352 (386)
T ss_pred             ccccCCCcccccCCCcHHHHHHHHHHHHHhccc
Confidence            8887777777 9999999999999999999874

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.86  E-value=1.9e-20  Score=208.77  Aligned_cols=269  Identities=15%  Similarity=0.218  Sum_probs=187.4

Q ss_pred             HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ..|+.+++++||+ |+|+++++++    .+++|......                 .....++..++...|+.  -|+++
T Consensus        28 ~~L~~~~~~~al~~~agl~~~~Id----~vi~g~~~~~~-----------------~~g~~~ar~~~~~~Gl~~~~p~~~   86 (387)
T PRK08947         28 EDLSAHLMRSLLARNPALDPAEID----DIIWGCVQQTL-----------------EQGFNIARNAALLAGIPHSVPAVT   86 (387)
T ss_pred             HHHHHHHHHHHHHhccCcChHHhC----eEEEEeccccc-----------------cccccHHHHHHHHcCCCCCCccee
Confidence            5688899999999 4899999999    78888432110                 00122344577888885  47899


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-------------------HHH------HHHcCC------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-------------------HIK------MSKSGM------  328 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------------~~~------~~~~g~------  328 (829)
                      |+++|+||+.|+..|+++|++|++|++||||+|.++....                   .+.      ..+.|.      
T Consensus        87 V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~  166 (387)
T PRK08947         87 VNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQD  166 (387)
T ss_pred             eechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHH
Confidence            9999999999999999999999999999999998764210                   000      000000      


Q ss_pred             ------------------C-------------------CCCCCCC------------C-CCC------CCCCcccccceE
Q psy11396        329 ------------------L-------------------SPDGHCY------------S-FDQ------RANGFVPGEGVG  352 (829)
Q Consensus       329 ------------------l-------------------s~~~~~~------------p-fd~------~~~G~~~gEGaa  352 (829)
                                        +                   .++...|            | |+.      ..+...++|||+
T Consensus       167 ~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa  246 (387)
T PRK08947        167 AFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGAS  246 (387)
T ss_pred             HHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceE
Confidence                              0                   0011111            0 111      133467899999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE  432 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~  432 (829)
                      ++||.+++.|++.+.+++++|.|++.+.....  ..   ..+...+++++|+++|++|+|||++|.|.+++..    |..
T Consensus       247 Avvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~--~~---~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~----~l~  317 (387)
T PRK08947        247 AMLVMSESRAKELGLKPRARIRSMAVAGCDPS--IM---GYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ----SLP  317 (387)
T ss_pred             EEEEccHHHHHHCCCCccEEEEEEEEcCcCcc--cc---cccHHHHHHHHHHHcCCCHHHCCEEEecccchHH----HHH
Confidence            99999999999999999999999998743222  11   1234678999999999999999999999776643    555


Q ss_pred             HHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccc
Q psy11396        433 ALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDI  512 (829)
Q Consensus       433 Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  512 (829)
                      .++. |+-......++.++.-.-..|||.||+|+.+++.++.+|+.                                  
T Consensus       318 ~~e~-lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~----------------------------------  362 (387)
T PRK08947        318 CLKD-LGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER----------------------------------  362 (387)
T ss_pred             HHHH-cCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh----------------------------------
Confidence            5543 33101111233444444446999999999999999999975                                  


Q ss_pred             cccCccEEEEeccCCCCceEEEEeee
Q psy11396        513 KNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       513 ~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                        ...++++++++|=||..+.+|||.
T Consensus       363 --~~~~~gl~~~~~g~G~g~a~~~e~  386 (387)
T PRK08947        363 --KDAQFGLATMCIGLGQGIATVFER  386 (387)
T ss_pred             --cCCCEEEEEEeecccceeEEEEEe
Confidence              023578899888778777788874

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=99.86  E-value=4.7e-20  Score=207.72  Aligned_cols=283  Identities=18%  Similarity=0.203  Sum_probs=187.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCC--CCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh-------hhccC
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFS--LSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS-------YFLNL  273 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~--i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia-------~~lgl  273 (829)
                      ..|+.+++++||+|||+++++  |+    ++|+|......              +.+  ...++..++       ..+|+
T Consensus        49 ~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~--------------~~~--~~~~a~~~~~~~gl~~~~~gl  108 (438)
T PTZ00455         49 EELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGEL--------------FSS--QGHLGPAAVGSLGQSGASNAL  108 (438)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEeccccc--------------ccc--ccchHHHHHHhccCccccccc
Confidence            468899999999999999998  99    77777542111              000  011122233       45566


Q ss_pred             C-CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH--------------------------HH-----
Q psy11396        274 Q-GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI--------------------------HI-----  321 (829)
Q Consensus       274 ~-Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--------------------------~~-----  321 (829)
                      . -|+++|+++|+||+.||..|+++|++|++|++||+|+|.++....                          +.     
T Consensus       109 ~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  188 (438)
T PTZ00455        109 LYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRMK  188 (438)
T ss_pred             CCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHHH
Confidence            5 499999999999999999999999999999999999997644210                          00     


Q ss_pred             HHHHcCCCC------------------CCCC--CCCCC------------------------CCCCCcccccceEEEEEc
Q psy11396        322 KMSKSGMLS------------------PDGH--CYSFD------------------------QRANGFVPGEGVGVLMLK  357 (829)
Q Consensus       322 ~~~~~g~ls------------------~~~~--~~pfd------------------------~~~~G~~~gEGaaalvL~  357 (829)
                      .+...+.++                  |...  .++..                        ...+.+.++|||+++||.
T Consensus       189 ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl~  268 (438)
T PTZ00455        189 YIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVLA  268 (438)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEEe
Confidence            011111111                  1101  01111                        012334569999999999


Q ss_pred             cchhhhhCCCce----EEEEEEeeeecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396        358 KLKDAKKDGDDI----YCIIKGWGVNQDGKTNGITA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE  432 (829)
Q Consensus       358 ~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~  432 (829)
                      +++.|++.+.++    .++|+|++..++........ ........+++++|++||++|+|||++|.|.+++..    |..
T Consensus       269 See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~----~l~  344 (438)
T PTZ00455        269 SEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFTIA----ELL  344 (438)
T ss_pred             cHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccChHH----HHH
Confidence            999999988777    78999999886632111100 111223689999999999999999999999888754    444


Q ss_pred             HHHHH-hc-----------ccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCC
Q psy11396        433 ALCES-FN-----------KFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN  498 (829)
Q Consensus       433 Al~~~-~~-----------~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~  498 (829)
                      .++.+ |.           +.....+..||+...+.+  |||.||+|+.+++.++++|+..--..+              
T Consensus       345 ~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag~~Q--------------  410 (438)
T PTZ00455        345 MYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCGEYQ--------------  410 (438)
T ss_pred             HHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhccccCC--------------
Confidence            44332 11           111122346776666665  999999999999999999986311100              


Q ss_pred             CCeeeccccccccccccCccEEEEeccC-CCCceEEEEee
Q psy11396        499 SPFFINTKCKSWDIKNKKKRMAAINSFG-FSGTNAHIVLM  537 (829)
Q Consensus       499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G-~gG~na~~vl~  537 (829)
                          |          .+.++++++.+.| +|+++...||+
T Consensus       411 ----v----------~~~~~~gl~~~~Gg~~~~~~~~vl~  436 (438)
T PTZ00455        411 ----M----------KNIPALGATLNMGGDDKTAVSTVLQ  436 (438)
T ss_pred             ----C----------CCcccEEEEeccCCCcceEEEEEEe
Confidence                0          1124678888887 66666666664

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.86  E-value=1.3e-20  Score=212.82  Aligned_cols=269  Identities=15%  Similarity=0.191  Sum_probs=191.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+++++||+|+|+++++|+    .|++|......                  ....++..++...|+.  -|+++|
T Consensus        30 ~eL~~~a~~~al~~agl~~~~ID----~vi~G~~~~~~------------------~~~~~ar~~a~~aGl~~~~P~~tV   87 (428)
T PRK08963         30 VDLGKMVVGELLARSEIDPELIE----QLVFGQVVQMP------------------EAPNIAREIVLGTGMNVHTDAYSV   87 (428)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCC------------------CccHHHHHHHHHCCCCCCCcceee
Confidence            56889999999999999999998    78888542100                  0122455688889995  499999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-------------------H---HHH----------cCC
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-------------------K---MSK----------SGM  328 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-------------------~---~~~----------~g~  328 (829)
                      +++|+||+.|+..|+++|++|++|++||||+|.++......                   .   +..          .++
T Consensus        88 ~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (428)
T PRK08963         88 SRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAV  167 (428)
T ss_pred             hhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCccc
Confidence            99999999999999999999999999999999886432100                   0   000          000


Q ss_pred             ---------------------CC-------------------CCCCC---------CCCC--------------------
Q psy11396        329 ---------------------LS-------------------PDGHC---------YSFD--------------------  339 (829)
Q Consensus       329 ---------------------ls-------------------~~~~~---------~pfd--------------------  339 (829)
                                           ++                   ..+..         .|+.                    
T Consensus       168 ~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~e~~~~  247 (428)
T PRK08963        168 AEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLEDYAK  247 (428)
T ss_pred             ccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCHHHHhc
Confidence                                 00                   00000         0111                    


Q ss_pred             ------------CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy11396        340 ------------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFN  407 (829)
Q Consensus       340 ------------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Ag  407 (829)
                                  ...+.+.++|||+++||.+++.|++.+.+++++|.|++........   . ...+...+++++|+++|
T Consensus       248 ~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~---~-~~~~~~~a~~~al~~AG  323 (428)
T PRK08963        248 LRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQ---D-MLLGPAYATPLALERAG  323 (428)
T ss_pred             CCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchh---h-hhhHHHHHHHHHHHHcC
Confidence                        0112345699999999999999999999999999998876421100   0 12334678999999999


Q ss_pred             CCCCCccEEEecCCCCCCCChHHHHHHHHHh---------cccCCCCCcc---ccCCcccCc--CcchhhhhHHHHHHHH
Q psy11396        408 INPNDIQLLEAHGTGTKLGDPIEFEALCESF---------NKFSYHKNFC---ALGSVKSNI--GHSATAAGVIGMIKII  473 (829)
Q Consensus       408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~---------~~~~~~~~~~---~v~s~k~~~--GH~~gAsG~~~li~~~  473 (829)
                      ++++|||++|.|.+++..    |...+...-         +. ....+.+   ||+...+.+  |||.||+|+..++.++
T Consensus       324 l~~~DiD~~Ei~d~Fa~~----~l~~~e~l~~~~~~~~~~g~-~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~  398 (428)
T PRK08963        324 LTLADLTLIDMHEAFAAQ----TLANLQMFASERFAREKLGR-SQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTL  398 (428)
T ss_pred             CCHHHCCEEEEccccHHH----HHHHHHHhcCchhhhhcccc-cccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHH
Confidence            999999999999888743    444443320         11 1111223   666666655  9999999999999999


Q ss_pred             HHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       474 l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                      ++|+.+                                    ..++++++..+=||...++|||.
T Consensus       399 ~qLrg~------------------------------------~g~~gl~~~c~ggG~g~a~~ie~  427 (428)
T PRK08963        399 HELRRR------------------------------------GGGLGLTTACAAGGLGAAMVLEV  427 (428)
T ss_pred             HHHhhc------------------------------------CCCEEEEEEccccChhhEEEEEe
Confidence            999762                                    12468999999999999999985

>PRK06059 lipid-transfer protein; Provisional

Probab=99.86  E-value=1.8e-20  Score=210.87  Aligned_cols=282  Identities=14%  Similarity=0.130  Sum_probs=193.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+|+++||+|||+++++++    .+++++...+.                 ......+..++..+|+++ |.++|+
T Consensus        24 ~~La~~A~~~Al~dAgl~~~dId----~vi~~~~~~~~-----------------~~~~~~a~~va~~lG~~~~~~~~v~   82 (399)
T PRK06059         24 VEYGVVAARAALADAGLDWRDVQ----LVVGADTIRNG-----------------YPGFVAGATFAQALGWNGAPVSSSY   82 (399)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCc-----------------cCCccHHHHHHHHhCCCCCceeccc
Confidence            56899999999999999998888    67766432110                 011123567889999987 899999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH--H--H-----HHHHH---cCCC------------------C-
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD--I--H-----IKMSK---SGML------------------S-  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~--~--~-----~~~~~---~g~l------------------s-  330 (829)
                      .+|+|++.||.+|+++|++|++|.+||+|+|.+....  .  .     ..+..   .+..                  + 
T Consensus        83 ~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~  162 (399)
T PRK06059         83 AACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATV  162 (399)
T ss_pred             chhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCH
Confidence            9999999999999999999999999999999765310  0  0     00000   0110                  0 


Q ss_pred             -----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhC--CCceEEEEEEe
Q psy11396        331 -----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKD--GDDIYCIIKGW  376 (829)
Q Consensus       331 -----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~--g~~i~a~I~g~  376 (829)
                                 ..+...|...                     .-+-..++|||+++||.+++.|++.  +.+..++|+|+
T Consensus       163 e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~  242 (399)
T PRK06059        163 EDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAI  242 (399)
T ss_pred             HHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEE
Confidence                       0000011110                     1244567999999999999999887  66677899999


Q ss_pred             eeecCCCCC------CC--------CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-----
Q psy11396        377 GVNQDGKTN------GI--------TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-----  437 (829)
Q Consensus       377 ~~~~dg~~~------~~--------~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-----  437 (829)
                      +...+....      .+        ..++......+++++|+++|++++|||++|.|.+++..    |...+...     
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~----~l~~~e~lGl~~~  318 (399)
T PRK06059        243 STVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTAL----ELDWYEHLGLCPK  318 (399)
T ss_pred             EEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHH----HHHHHHHcCCCCC
Confidence            876532210      01        11112223578999999999999999999999987754    44443222     


Q ss_pred             ------h-cccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccc
Q psy11396        438 ------F-NKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCK  508 (829)
Q Consensus       438 ------~-~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~  508 (829)
                            + .+.....+.+||+...+.+  |||.||+|+.+++.+++||+...-..                         
T Consensus       319 G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~ag~~-------------------------  373 (399)
T PRK06059        319 GEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQAGGR-------------------------  373 (399)
T ss_pred             CcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCcCCc-------------------------
Confidence                  1 1112233456887777776  99999999999999999998731110                         


Q ss_pred             cccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        509 SWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       509 ~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                          +-+..+++++.+.|.+|+.+.+|||.
T Consensus       374 ----Qv~~a~~gl~~~~g~~g~~~~~~l~~  399 (399)
T PRK06059        374 ----QVEGARVGITANQGLFGHGSSVIVAR  399 (399)
T ss_pred             ----cCCCccEEEEeccCCcccceEEEecC
Confidence                01134678888888889999999873

>PRK06158 thiolase; Provisional

Probab=99.86  E-value=3.9e-20  Score=206.57  Aligned_cols=274  Identities=14%  Similarity=0.125  Sum_probs=187.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+|+++||+|||+++++|+    ++++++...                      ......++..+|+++ |.+.++
T Consensus        29 ~eL~~eA~~~Al~dAgl~~~dID----~iv~~~~~~----------------------~~~~~~la~~lGl~~~~~~~~~   82 (384)
T PRK06158         29 MELLAQAAHRALADAGLTMADVD----GLFTASPDD----------------------ALWGLSVAEYLGIRPRFVDGTM   82 (384)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCC----------------------CCcHHHHHHHcCCCCeeecccc
Confidence            46899999999999999999999    888874210                      011235788889975 777899


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEe-ccccccCh---------------------HHHH------HHHHcCCC----
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAG-GVYIINTP---------------------DIHI------KMSKSGML----  329 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvg-G~e~~~~~---------------------~~~~------~~~~~g~l----  329 (829)
                      ++|+|+..+|..|+++|++|.+|++||+ |.+.+...                     ....      ++.+.|.-    
T Consensus        83 ~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~  162 (384)
T PRK06158         83 IGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQL  162 (384)
T ss_pred             CccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHH
Confidence            9999999999999999999999999985 66643210                     0000      00000100    


Q ss_pred             -------------CCCC----------------CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeec
Q psy11396        330 -------------SPDG----------------HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQ  380 (829)
Q Consensus       330 -------------s~~~----------------~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~  380 (829)
                                   .|..                .+.|+. ..+.+.++||++++||.+++.|++.+.++ +.|.|++..+
T Consensus       163 a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~-~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~  240 (384)
T PRK06158        163 AEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLS-VRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAAT  240 (384)
T ss_pred             HHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCc-hhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEec
Confidence                         0100                111222 24567899999999999999999876554 5688887766


Q ss_pred             CCCCCC-CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH------------hcccCCCCCc
Q psy11396        381 DGKTNG-ITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES------------FNKFSYHKNF  447 (829)
Q Consensus       381 dg~~~~-~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~------------~~~~~~~~~~  447 (829)
                      +..... ..........+++++||++||++|+|||++|.|+++|..    |...+...            ..+.....+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~----~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~  316 (384)
T PRK06158        241 WHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN----TILFLEDLGFCAKGEGGAFVEGGRIAPGGR  316 (384)
T ss_pred             CCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH----HHHHHHHcCCCCCCcHHHHHHCCCCccCCC
Confidence            543221 111223456789999999999999999999999998864    44443322            1222233455


Q ss_pred             cccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEecc
Q psy11396        448 CALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF  525 (829)
Q Consensus       448 ~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~  525 (829)
                      +||+...+++  ||| ||+|+.+++++++||+...-..+                             -...++++++++
T Consensus       317 ~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQ-----------------------------v~~a~~gl~~~~  366 (384)
T PRK06158        317 LPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQ-----------------------------VAGAEVALAHGN  366 (384)
T ss_pred             ccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCc-----------------------------CCCCCEEEEECC
Confidence            7888888776  999 99999999999999987421110                             013467899988


Q ss_pred             C-CCCceEEEEeee
Q psy11396        526 G-FSGTNAHIVLME  538 (829)
Q Consensus       526 G-~gG~na~~vl~e  538 (829)
                      | ++.++..+||+.
T Consensus       367 Gg~~~~~~~~vl~~  380 (384)
T PRK06158        367 GGVLSSQATAILGT  380 (384)
T ss_pred             CCcccceEEEEEec
Confidence            7 544555556653

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=4.3e-20  Score=208.29  Aligned_cols=251  Identities=15%  Similarity=0.165  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+|+++||+|||+++++||    ++++|.....+               .+  .+.....++..+|+.+ |+++|+
T Consensus        38 ~eL~~eA~~~Al~dagl~~~dID----~vv~~~~~~~~---------------~g--~~~~~~~~~~~lGl~~~~~~~v~   96 (430)
T PRK06365         38 RERVKKAFDYAMNDAGLTLADID----GSVASYFSDHF---------------QR--QLLAGIMVQDYLGLVPKPSKRIE   96 (430)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC----EEEEecccccc---------------cc--cchhhHHHHHhcCCCCCceEEEe
Confidence            46899999999999999999998    67766322111               01  1122234678899975 889999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH--HHH---------H-cCCC------------------C-
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--KMS---------K-SGML------------------S-  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~--~~~---------~-~g~l------------------s-  330 (829)
                      .+|+|++.||..|++.|++|.+|+|||+|+|.+.......  .+.         . .+..                  + 
T Consensus        97 ~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~  176 (430)
T PRK06365         97 GGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTV  176 (430)
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCH
Confidence            9999999999999999999999999999999865422100  000         0 0000                  0 


Q ss_pred             -----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeee
Q psy11396        331 -----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV  378 (829)
Q Consensus       331 -----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~  378 (829)
                                 ......||..                     ..+...++|||+|+||.+++.|++.+.++. .|++++.
T Consensus       177 e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~  255 (430)
T PRK06365        177 EQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGT  255 (430)
T ss_pred             HHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEE
Confidence                       0000112211                     123355799999999999999998776653 4566665


Q ss_pred             ecCCCCCCC-----------------------CCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHH
Q psy11396        379 NQDGKTNGI-----------------------TAPNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEA  433 (829)
Q Consensus       379 ~~dg~~~~~-----------------------~~p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~A  433 (829)
                      .+++.....                       ..........++++||+++|++  ++|||++|.|.+++..    |...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~----~l~~  331 (430)
T PRK06365        256 GSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSS----EIQT  331 (430)
T ss_pred             eccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHH----HHHH
Confidence            544322100                       0112334468999999999997  7999999999988754    4444


Q ss_pred             HHHH-hc-----------ccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        434 LCES-FN-----------KFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       434 l~~~-~~-----------~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      +... |.           +.....+.+||+...+.+  ||+.||+|+.+++.+++||+..
T Consensus       332 lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~  391 (430)
T PRK06365        332 YEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGR  391 (430)
T ss_pred             HHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcc
Confidence            4322 11           111223457888877776  9999999999999999999985

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=3.3e-20  Score=206.60  Aligned_cols=266  Identities=14%  Similarity=0.178  Sum_probs=188.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.++++++|+|+|+++++|+    .|++|......                 .....++..++...|+.  -|.++|
T Consensus        27 ~eL~~~a~~~aL~~agi~~~~Id----~v~~G~~~~~~-----------------~q~~~~ar~~~l~~Gl~~~~p~~tV   85 (387)
T PRK07850         27 AELLGAVQRAVLDRAGIDPGDVE----QVIGGCVTQAG-----------------EQSNNITRTAWLHAGLPYHVGATTI   85 (387)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccc-----------------cccchHHHHHHHhCCCCCCCceEEE
Confidence            56889999999999999999998    77887432100                 00112344556667885  489999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-HH---H----------H-------------HHcCC-----
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-HI---K----------M-------------SKSGM-----  328 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-~~---~----------~-------------~~~g~-----  328 (829)
                      +++|+||+.|+..|++.|++|++|++||+|+|+|+.... ..   .          +             .+.|.     
T Consensus        86 ~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~  165 (387)
T PRK07850         86 DCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDV  165 (387)
T ss_pred             ecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHH
Confidence            999999999999999999999999999999998865321 00   0          0             00000     


Q ss_pred             -------------------CC--------C---C-----CC---------------------CCCCC----CCCCCcccc
Q psy11396        329 -------------------LS--------P---D-----GH---------------------CYSFD----QRANGFVPG  348 (829)
Q Consensus       329 -------------------ls--------~---~-----~~---------------------~~pfd----~~~~G~~~g  348 (829)
                                         +.        +   +     +.                     ...|.    ...+.+.++
T Consensus       166 d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~s  245 (387)
T PRK07850        166 DAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQIS  245 (387)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcC
Confidence                               00        0   0     00                     11221    112446789


Q ss_pred             cceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh
Q psy11396        349 EGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP  428 (829)
Q Consensus       349 EGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~  428 (829)
                      |||+++||.+++.|++.+.++.++|.|++........     ...+...+++++|+++|++|+|||++|.|.+++..   
T Consensus       246 DGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~---  317 (387)
T PRK07850        246 DGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYY-----HLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASV---  317 (387)
T ss_pred             CceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchh-----hcchHHHHHHHHHHHcCCCHHHcCeeeecccchHH---
Confidence            9999999999999999998899999999875432211     13345789999999999999999999999776643   


Q ss_pred             HHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccc
Q psy11396        429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCK  508 (829)
Q Consensus       429 ~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~  508 (829)
                       |...+ +.++-   ...++.++.-.-.+|||.||+|+..++.++.+|+.+                             
T Consensus       318 -~l~~~-e~lg~---~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~-----------------------------  363 (387)
T PRK07850        318 -VLSWA-QVHEP---DMDKVNVNGGAIALGHPVGSTGARLITTALHELERT-----------------------------  363 (387)
T ss_pred             -HHHHH-HHcCC---CCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc-----------------------------
Confidence             44333 34442   112344444444469999999999999999999762                             


Q ss_pred             cccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        509 SWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       509 ~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                             ..++++++..+-||...+++||.
T Consensus       364 -------~~~~g~~~~c~~gg~g~a~~~e~  386 (387)
T PRK07850        364 -------DKSTALITMCAGGALSTGTIIER  386 (387)
T ss_pred             -------CCCeEEEEEccccCceeEEEEEe
Confidence                   23568888888899999999985

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=5.9e-20  Score=204.52  Aligned_cols=252  Identities=15%  Similarity=0.120  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+|+++||+|||+++.+++    ++++++....+               .+  ....+..++..+|+. .|.+.|
T Consensus        29 ~~~L~~~A~~~Al~dagl~~~dID----~~i~~~~~~~~---------------~~--~~~~a~~l~~~lG~~~~~~~~V   87 (392)
T PRK06065         29 PQELAWEAASKALDEAGLELKDID----CVVIGSAPDAF---------------DG--VHMKGEYLSHGSGGIRKPVSRV   87 (392)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCcc---------------cc--cccHHHHHHHHcCCCCCCeEEE
Confidence            367999999999999999999999    88887421111               00  123455688888886 599999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccCh----HHHH--------------------------HHHHcCCCC
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP----DIHI--------------------------KMSKSGMLS  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~----~~~~--------------------------~~~~~g~ls  330 (829)
                      +++|+|+..+|..|+++|++|.+|.+||+|+|.+...    ....                          ++.+.|.-.
T Consensus        88 ~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~  167 (392)
T PRK06065         88 YVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKK  167 (392)
T ss_pred             ecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCH
Confidence            9999999999999999999999999999999975321    0000                          000000000


Q ss_pred             -----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeee
Q psy11396        331 -----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV  378 (829)
Q Consensus       331 -----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~  378 (829)
                                 ......|+..                     .-+.+.++|||+++||.+++.|++.+.++ ..|.|++.
T Consensus       168 e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~  246 (392)
T PRK06065        168 EEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGW  246 (392)
T ss_pred             HHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEE
Confidence                       0011112111                     12446789999999999999999887665 35899888


Q ss_pred             ecCCCCCCCC-CCCHHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCCCCChHHHHHHHHH-----------h-cccCC
Q psy11396        379 NQDGKTNGIT-APNTKSQIRLQTKIYKKFNINP--NDIQLLEAHGTGTKLGDPIEFEALCES-----------F-NKFSY  443 (829)
Q Consensus       379 ~~dg~~~~~~-~p~~~~~~~ai~~Al~~Agl~~--~dId~ve~hgtgt~~gD~~E~~Al~~~-----------~-~~~~~  443 (829)
                      ..+....... .........+.+++|+++|+++  +|||++|.|.++|..    |...+...           + .+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~----~l~~~E~lG~~~~G~~~~~~~~g~~~  322 (392)
T PRK06065        247 TLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYK----ELHHLEGLQLAKRGEAPKLLKEGVFD  322 (392)
T ss_pred             ecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHH----HHHHHHHcCCCCCCcHHHHHHCCCcc
Confidence            6654321111 1123445679999999999985  999999999998853    33333221           1 11122


Q ss_pred             CCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        444 HKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       444 ~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      ..+.+||+...+.+  |||.||+|+.+++.+++||+..
T Consensus       323 ~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~  360 (392)
T PRK06065        323 IDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGT  360 (392)
T ss_pred             CCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhcc
Confidence            34457887777765  9999999999999999999874

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=2.3e-20  Score=208.48  Aligned_cols=263  Identities=17%  Similarity=0.240  Sum_probs=189.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv  280 (829)
                      ..|+.+++++||+|+|+++++|+    ++++|......                  ....++..++..+|+..  |.++|
T Consensus        27 ~~L~~~a~~~al~dagi~~~dID----~vi~g~~~~~~------------------~~~~~a~~~~~~~Gl~~~~p~~~v   84 (388)
T PRK06366         27 PQLGGAAIKAVIDDAKLDPALVQ----EVIMGNVIQAG------------------VGQNPAGQAAYHAGLPFGVTKYTV   84 (388)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCC------------------ccCcHHHHHHHHCCCCCCCcceee
Confidence            56899999999999999999999    88888432110                  01123556788899964  99999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-----------HH-----HHHH----cCCC-----------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----------HI-----KMSK----SGML-----------  329 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-----------~~-----~~~~----~g~l-----------  329 (829)
                      +.+|+||+.|+..|+++|++|++|++||+|+|.+.....           ..     .+..    .+..           
T Consensus        85 ~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~  164 (388)
T PRK06366         85 NVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVS  164 (388)
T ss_pred             echhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHH
Confidence            999999999999999999999999999999998652100           00     0000    0000           


Q ss_pred             ----------C------------------CC-CCCC----CC------------------------C-----CCCCCccc
Q psy11396        330 ----------S------------------PD-GHCY----SF------------------------D-----QRANGFVP  347 (829)
Q Consensus       330 ----------s------------------~~-~~~~----pf------------------------d-----~~~~G~~~  347 (829)
                                +                  +. +..+    ||                        +     ...+.+.+
T Consensus       165 A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~~  244 (388)
T PRK06366        165 AERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQL  244 (388)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCCc
Confidence                      0                  11 1110    11                        1     01223556


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD  427 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD  427 (829)
                      +|||+++||.+++.|++.+.++.++|+|++..........     .....+++++|+++|++|+|||++|.|..++..  
T Consensus       245 sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~-----~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~--  317 (388)
T PRK06366        245 SDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFV-----EAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIA--  317 (388)
T ss_pred             ccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhc-----ccHHHHHHHHHHHcCCCHHHcceeeccchhHHH--
Confidence            9999999999999999999889899999988765322111     112589999999999999999999999777643  


Q ss_pred             hHHHHHHHHHhcccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecc
Q psy11396        428 PIEFEALCESFNKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT  505 (829)
Q Consensus       428 ~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~  505 (829)
                        |...++.. +-   .. . +|+...+.+  |||.||+|+.+++.++.+|+..                          
T Consensus       318 --~l~~le~l-gl---~g-~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~--------------------------  363 (388)
T PRK06366        318 --SIIVRDQL-KI---DN-E-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR--------------------------  363 (388)
T ss_pred             --HHHHHHHh-CC---CC-C-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc--------------------------
Confidence              55555433 21   11 2 455555554  9999999999999999999761                          


Q ss_pred             ccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        506 KCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       506 ~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                ..++.+++..+-||+-.++|||.
T Consensus       364 ----------~~~~g~~~~c~~gg~g~a~~~e~  386 (388)
T PRK06366        364 ----------HMKTGLATLCHGGGGAHTLTLEM  386 (388)
T ss_pred             ----------CCCeEEEEEecccChhhEEEEEe
Confidence                      13567888888889999999985

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=99.85  E-value=1.1e-19  Score=203.65  Aligned_cols=250  Identities=16%  Similarity=0.168  Sum_probs=173.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+++++||+|||+++++|+    ++++|+....+.                  .......++..+|+.+ |.++|+
T Consensus        28 ~~L~~ea~~~AL~dagl~~~dID----~v~vg~~~~~~~------------------~~~~~~~~a~~lGl~~~~~~~v~   85 (398)
T PRK06157         28 EDLMVEAFLEALADAGIEPKDID----AAWFGTHYDEIG------------------SGKSGTPLSRALRLPNIPVTRVE   85 (398)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc------------------ccchhHHHHHHcCCCCCCEEEEe
Confidence            46889999999999999999999    888885432110                  0001134677889976 788899


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---HH-----HHHHc-CCCC----------------------
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---HI-----KMSKS-GMLS----------------------  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---~~-----~~~~~-g~ls----------------------  330 (829)
                      .+|+||+.||++|+++|++|++|++||+|+|.+.....   ..     .+... +.+.                      
T Consensus        86 ~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e~  165 (398)
T PRK06157         86 NFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSRED  165 (398)
T ss_pred             cccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHHH
Confidence            99999999999999999999999999999998643110   00     00000 0000                      


Q ss_pred             -------------------CCCC------------C----CCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEE
Q psy11396        331 -------------------PDGH------------C----YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG  375 (829)
Q Consensus       331 -------------------~~~~------------~----~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g  375 (829)
                                         |+..            .    .|+ ..-+...++|||+++||.+++.|++.+.+..++|+|
T Consensus       166 ~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl-~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g  244 (398)
T PRK06157        166 LKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPL-GLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKA  244 (398)
T ss_pred             HcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCC-chhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEE
Confidence                               0000            0    011 112456689999999999999999888756788999


Q ss_pred             eeeecCCCCCC---CCCC-CHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHHHHHH-hc---------
Q psy11396        376 WGVNQDGKTNG---ITAP-NTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEALCES-FN---------  439 (829)
Q Consensus       376 ~~~~~dg~~~~---~~~p-~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~---------  439 (829)
                      ++...+.....   ...| .......+.++||++||++  ++|||++|.|.+++..    |...++.. |.         
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~----~l~~~e~lGl~~~Ge~~~~~  320 (398)
T PRK06157        245 LQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSIT----ELVTMEDLGLSERGQAWRDV  320 (398)
T ss_pred             EEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChHH----HHHHHHHcCCCCCCchHHHH
Confidence            98765432110   1111 1223457899999999998  7999999999988754    44444322 11         


Q ss_pred             --ccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        440 --KFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       440 --~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                        +.....+.+||+...+.+  |||.||+|+.+++.+++||+..
T Consensus       321 ~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~  364 (398)
T PRK06157        321 LDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR  364 (398)
T ss_pred             HCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence              111223457888777765  9999999999999999999874

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=8.8e-20  Score=205.37  Aligned_cols=254  Identities=19%  Similarity=0.184  Sum_probs=171.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+|+++||+|||+++++|+    ++++|+..+++..  .           .......+.  ....++.| |+++|+
T Consensus        27 ~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~~~~~~~--~-----------~~~~~~~~~--~~~~~~~g~~~~~v~   87 (403)
T PRK06289         27 ADLTREVVDGTLAAAGVDADDIE----VVHVGNFFGELFA--G-----------QGHLGAMPA--TVHPALWGVPASRHE   87 (403)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc--c-----------ccccchHHH--HHhhcCCCCceeecc
Confidence            56899999999999999999999    8888865443210  0           000000111  12223333 899999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH---HHH------HHcC----CC------------------C
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH---IKM------SKSG----ML------------------S  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---~~~------~~~g----~l------------------s  330 (829)
                      ++|+|++.||..|+.+|++|++|++||+|+|.+......   ..+      ...+    ..                  +
T Consensus        88 ~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t  167 (403)
T PRK06289         88 AACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLD  167 (403)
T ss_pred             cccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999986532110   000      0000    00                  0


Q ss_pred             ------------CCCCCCCCCC--------------------------CCCCcccccceEEEEEccchhhhhCCC-ceEE
Q psy11396        331 ------------PDGHCYSFDQ--------------------------RANGFVPGEGVGVLMLKKLKDAKKDGD-DIYC  371 (829)
Q Consensus       331 ------------~~~~~~pfd~--------------------------~~~G~~~gEGaaalvL~~~~~A~~~g~-~i~a  371 (829)
                                  ......|+..                          ..+.+.++|||+++||.+++.|++.+. ++.+
T Consensus       168 ~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~  247 (403)
T PRK06289        168 EEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIP  247 (403)
T ss_pred             HHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCE
Confidence                        0000011100                          112355799999999999999988775 6778


Q ss_pred             EEEEeeeecCCCCCCC------CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hcc---
Q psy11396        372 IIKGWGVNQDGKTNGI------TAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FNK---  440 (829)
Q Consensus       372 ~I~g~~~~~dg~~~~~------~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~~---  440 (829)
                      +|+|++..++......      ..| .......+.++||++||++++|||++|.|.+++..    |...++.. |..   
T Consensus       248 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~~----~l~~le~lGl~~~Ge  323 (403)
T PRK06289        248 RIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPS----EYLAIDHIGLTGPGE  323 (403)
T ss_pred             EEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchHH----HHHHHHHcCCCCCCc
Confidence            9999988755422111      011 22335679999999999999999999999998864    44444322 111   


Q ss_pred             --------cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        441 --------FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       441 --------~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                              .....+.+||+...+.+  |||.||+|+.+++.++.||+..
T Consensus       324 ~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~  372 (403)
T PRK06289        324 SWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGT  372 (403)
T ss_pred             HHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhcc
Confidence                    11124557888888776  9999999999999999999873

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=1e-19  Score=203.41  Aligned_cols=266  Identities=18%  Similarity=0.205  Sum_probs=182.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv  280 (829)
                      ..|+.+++++||+|||++++++|    ++++|.... ..                .....++..+....|+  ..|.++|
T Consensus        27 ~~L~~~a~~~al~dagl~~~~ID----~vv~g~~~~-~~----------------~~~~~~~~~~~l~~gl~~~~p~~~v   85 (382)
T PRK07801         27 ADLGAHVLKGLVDRTGIDPAAVD----DVIFGCVDT-IG----------------PQAGNIARTSWLAAGLPEEVPGVTV   85 (382)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcC----EEEEEeecc-CC----------------cccccHHHHHHHHcCCCCCCceeee
Confidence            45889999999999999999999    888874310 00                0001122222223344  4689999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hH--H--HH-------------HH-HHcCC--CC---------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PD--I--HI-------------KM-SKSGM--LS---------  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~--~--~~-------------~~-~~~g~--ls---------  330 (829)
                      +.+|+||+.|+..|+++|++|++|++||+|+|.++. |.  .  ..             .+ ...+.  .+         
T Consensus        86 ~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~  165 (382)
T PRK07801         86 DRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIA  165 (382)
T ss_pred             cchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999997643 21  0  00             00 00110  00         


Q ss_pred             ------------------------CCC-CC----CCCC----------------------------CCCCCcccccceEE
Q psy11396        331 ------------------------PDG-HC----YSFD----------------------------QRANGFVPGEGVGV  353 (829)
Q Consensus       331 ------------------------~~~-~~----~pfd----------------------------~~~~G~~~gEGaaa  353 (829)
                                              +.. ..    .|++                            ...+...++|||++
T Consensus       166 ~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa  245 (382)
T PRK07801        166 EKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASA  245 (382)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEE
Confidence                                    000 00    0110                            12234567899999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA  433 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A  433 (829)
                      +||++++.|++.+.+++++|.|++...+.......     +...++++||++||++|+|||++|.|.+++..    |...
T Consensus       246 ~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~a~~~a~~~agi~~~did~~e~~d~Fa~~----~~~~  316 (382)
T PRK07801        246 VLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLT-----APIPATRYALEKTGLSIDDIDVVEINEAFAPV----VLAW  316 (382)
T ss_pred             EEEecHHHHHHCCCCccEEEEEEEEecCChHhhcc-----ChHHHHHHHHHHcCCCHHHcCEeeecccchHH----HHHH
Confidence            99999999999998889999998765543211111     22468999999999999999999999777643    5555


Q ss_pred             HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccccc
Q psy11396        434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK  513 (829)
Q Consensus       434 l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  513 (829)
                      +.. ++-   ..+++..+.-...+|||.||+|+.+++.++++|+..                                  
T Consensus       317 ~e~-lG~---~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~----------------------------------  358 (382)
T PRK07801        317 LKE-TGA---DPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT----------------------------------  358 (382)
T ss_pred             HHH-hCC---CchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc----------------------------------
Confidence            443 331   122344444444569999999999999999999861                                  


Q ss_pred             ccCccEEEEeccCCCCceEEEEeee
Q psy11396        514 NKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       514 ~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                        ..+++++++.|-||+.+++||+.
T Consensus       359 --~~~~gl~~~~gggg~~~~~vl~~  381 (382)
T PRK07801        359 --GGRYGLQTMCEGGGTANVTIIER  381 (382)
T ss_pred             --CCCEEEEEEcccccceeEEEEEe
Confidence              12467888888889999998874

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.84  E-value=8.2e-20  Score=205.57  Aligned_cols=246  Identities=15%  Similarity=0.211  Sum_probs=170.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-C-cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-G-PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-G-p~~tv  280 (829)
                      ..|+.+++++||+|+|+++++|+    .+++|.....                  .....++..++...|+. + |.++|
T Consensus        32 ~~L~~~a~~~al~~agl~~~~Id----~vi~G~~~~~------------------~~~~~~ar~~~l~aGl~~~~p~~~V   89 (430)
T TIGR02446        32 VDLGKMVVSELLARSEIDPKLIE----QLVFGQVVQM------------------PEAPNIAREIVLGTGMNVHTDAYSV   89 (430)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCc------------------CccchHHHHHHHhCCCCCCCchhhh
Confidence            46889999999999999999998    6777743210                  01123555666667886 3 99999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHH---------------HH-------H------c------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK---------------MS-------K------S------  326 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~---------------~~-------~------~------  326 (829)
                      +.+|+||+.|+..|+++|++|++|++||||+|+++.......               +.       .      .      
T Consensus        90 ~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (430)
T TIGR02446        90 TRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAV  169 (430)
T ss_pred             hhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccCccc
Confidence            999999999999999999999999999999999863110000               00       0      0      


Q ss_pred             -----CC-C-------------C---------------C----CCC---------CCCC---------------------
Q psy11396        327 -----GM-L-------------S---------------P----DGH---------CYSF---------------------  338 (829)
Q Consensus       327 -----g~-l-------------s---------------~----~~~---------~~pf---------------------  338 (829)
                           +. +             +               .    ++.         ..|+                     
T Consensus       170 ~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~~~t~e~~~~  249 (430)
T TIGR02446       170 AEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRHNSTLAGYAK  249 (430)
T ss_pred             ccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCCCCCHHHHhc
Confidence                 00 0             0               0    000         0111                     


Q ss_pred             -----C------CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy11396        339 -----D------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFN  407 (829)
Q Consensus       339 -----d------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Ag  407 (829)
                           +      ...+.+.++|||+++||.+++.|++.+.++.++|++++..........  +  .....++++||++||
T Consensus       250 ~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~--~--~~~~~a~~~al~~Ag  325 (430)
T TIGR02446       250 LRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDM--L--MGPSYATPLALQRAG  325 (430)
T ss_pred             CCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhh--c--ccHHHHHHHHHHHcC
Confidence                 0      022345679999999999999999998888899999886632221001  1  122468999999999


Q ss_pred             CCCCCccEEEecCCCCCCCChHHHHHHHHH----hcc----cCCCCCcc---ccCCcccCc--CcchhhhhHHHHHHHHH
Q psy11396        408 INPNDIQLLEAHGTGTKLGDPIEFEALCES----FNK----FSYHKNFC---ALGSVKSNI--GHSATAAGVIGMIKIIL  474 (829)
Q Consensus       408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~----~~~----~~~~~~~~---~v~s~k~~~--GH~~gAsG~~~li~~~l  474 (829)
                      ++++|||++|.|.+++..    |...+...    |..    .....+.+   ||+...+.+  |||.||+|+.+++.+++
T Consensus       326 l~~~Did~~Ei~daFa~~----~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~  401 (430)
T TIGR02446       326 LALSDLTLIDMHEAFAAQ----TLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLR  401 (430)
T ss_pred             CCHHHCCEEEeccccHHH----HHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHH
Confidence            999999999999888753    55555443    111    00111223   666666654  99999999999999999


Q ss_pred             HHhc
Q psy11396        475 SLKH  478 (829)
Q Consensus       475 ~L~~  478 (829)
                      +|+.
T Consensus       402 qL~g  405 (430)
T TIGR02446       402 ELKR  405 (430)
T ss_pred             HHhh
Confidence            9976

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=1.2e-19  Score=205.08  Aligned_cols=269  Identities=17%  Similarity=0.213  Sum_probs=189.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+.+|+++||+|||+++++|+    ++++|+.....                 . ....+..++..+|+.  .|.++|
T Consensus        28 ~~L~~~A~~~Al~dAgl~~~dID----~vi~g~~~~~~-----------------~-~~~~a~~v~~~lGl~~~~p~~~v   85 (426)
T PRK08170         28 SDLAVAAGRALLNRQPFAPDDLD----EVILGCAMPSP-----------------D-EANIARVVALRLGCGEKVPAWTV   85 (426)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC-----------------C-cChHHHHHHHHhCcCCCceeeec
Confidence            56899999999999999999999    88888543110                 0 113455688899994  499999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------------H-------HHHHH------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------------H-------IKMSK------  325 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------------~-------~~~~~------  325 (829)
                      +.+|+|++.|+..|+++|++|.+|++||+|+|.++....                      .       ..+..      
T Consensus        86 ~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (426)
T PRK08170         86 QRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLL  165 (426)
T ss_pred             cchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccccccC
Confidence            999999999999999999999999999999997553110                      0       00000      


Q ss_pred             cC--------CC-------------C------------CCCCC------------------CCCCC--------------
Q psy11396        326 SG--------ML-------------S------------PDGHC------------------YSFDQ--------------  340 (829)
Q Consensus       326 ~g--------~l-------------s------------~~~~~------------------~pfd~--------------  340 (829)
                      .+        .+             +            .....                  .|++.              
T Consensus       166 ~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~e~~~  245 (426)
T PRK08170        166 RGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSMEKLA  245 (426)
T ss_pred             ccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCHHHHh
Confidence            00        00             0            00000                  11111              


Q ss_pred             --------C------CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHc
Q psy11396        341 --------R------ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKF  406 (829)
Q Consensus       341 --------~------~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~A  406 (829)
                              .      .+.+.++|||+++||++++.|++.+.++.++|.+++.......  .   ...+...+++++|++|
T Consensus       246 ~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~--~---~~~~~~~a~~~al~~a  320 (426)
T PRK08170        246 KLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS--Q---MGLGPVHAATPLLQRH  320 (426)
T ss_pred             cCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch--h---hcccHHHHHHHHHHHc
Confidence                    0      3345679999999999999999999999889999877653321  1   1224568999999999


Q ss_pred             CCCCCCccEEEecCCCCCCCChHHHHHHHHH----hcccCC-------CCCccccCCcccCc--CcchhhhhHHHHHHHH
Q psy11396        407 NINPNDIQLLEAHGTGTKLGDPIEFEALCES----FNKFSY-------HKNFCALGSVKSNI--GHSATAAGVIGMIKII  473 (829)
Q Consensus       407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~----~~~~~~-------~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~  473 (829)
                      |++|+|||++|.|..++..    |...+...    |.....       .....||+...+.+  |||.||+|+.++..++
T Consensus       321 Gl~~~did~~ei~daFa~~----~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~  396 (426)
T PRK08170        321 GLTLEDLDLWEINEAFAAQ----VLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLL  396 (426)
T ss_pred             CCCHHHcCEEEecchhHHH----HHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHH
Confidence            9999999999999776643    33222211    100000       01124676666665  9999999999999999


Q ss_pred             HHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       474 l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                      .+|++.                                    +.++++++...-||.-.++|||.
T Consensus       397 ~~l~~~------------------------------------~~~~g~~~~c~~gg~g~a~~~e~  425 (426)
T PRK08170        397 HALKRR------------------------------------GTKRGIAAICIGGGQGGAMLLER  425 (426)
T ss_pred             HHHHhh------------------------------------CCCeEEEEEecCCChhheEEEEe
Confidence            999761                                    23578888888899999999985

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=2.9e-19  Score=198.88  Aligned_cols=266  Identities=19%  Similarity=0.210  Sum_probs=182.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhH--hhhhccCCCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPAR--VSYFLNLQGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--ia~~lgl~Gp~~tv  280 (829)
                      ..|+.+++++||+|+|+++++|+    .+++|.....                 +.....++..  +...++..-|.++|
T Consensus        27 ~~L~~~a~~~al~~a~l~~~~Id----~vi~G~~~~~-----------------~~~~~~~ar~~~l~~gl~~~vP~~tV   85 (390)
T PRK06504         27 ADLAAQVLDALVDRSGADPALIE----DVIMGCVSQV-----------------GEQATNVARNAVLASKLPESVPGTSI   85 (390)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccc-----------------ccccccHHHHHHHHcCCCCCCceEEE
Confidence            56889999999999999999999    7777744210                 0000112222  22333335699999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--H--------------HHHHc-C--C-------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--I--------------KMSKS-G--M-------------  328 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--~--------------~~~~~-g--~-------------  328 (829)
                      +.+|+||+.|+..|+++|++|++|++||||+|+|+.....  .              .+... .  .             
T Consensus        86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~~  165 (390)
T PRK06504         86 DRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKK  165 (390)
T ss_pred             echhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999988642210  0              00000 0  0             


Q ss_pred             --CC------------------C-CC-------------------------------------CCCCCCC-----CCCCc
Q psy11396        329 --LS------------------P-DG-------------------------------------HCYSFDQ-----RANGF  345 (829)
Q Consensus       329 --ls------------------~-~~-------------------------------------~~~pfd~-----~~~G~  345 (829)
                        ++                  + .+                                     ..+|...     ..+..
T Consensus       166 ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~s  245 (390)
T PRK06504        166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATAS  245 (390)
T ss_pred             hCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccCC
Confidence              00                  0 00                                     0111110     12335


Q ss_pred             ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396        346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL  425 (829)
Q Consensus       346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~  425 (829)
                      .++|||+++||.+++.|++.+.++.+.|.+++........     ...+...+++++|+++|++|+|||++|.|.+++..
T Consensus       246 ~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~-----~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~  320 (390)
T PRK06504        246 QICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVI-----MLEAPLPATERALKKAGMKIDDIDLYEVNEAFASV  320 (390)
T ss_pred             CCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchh-----hhccHHHHHHHHHHHcCCCHHHCCEEEecccchHH
Confidence            6789999999999999999988888888887765443211     12244569999999999999999999999887753


Q ss_pred             CChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecc
Q psy11396        426 GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT  505 (829)
Q Consensus       426 gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~  505 (829)
                          |...+. .|+-   ...++.++.-.-.+|||.||+|+.++..++.+|++.                          
T Consensus       321 ----~l~~~e-~lG~---~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~--------------------------  366 (390)
T PRK06504        321 ----PLAWLK-ATGA---DPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR--------------------------  366 (390)
T ss_pred             ----HHHHHH-HhCC---CCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh--------------------------
Confidence                444444 3331   122333443344469999999999999999999761                          


Q ss_pred             ccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        506 KCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       506 ~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                ..++++++..|-||+.+.+||+.
T Consensus       367 ----------~~~~gl~~~~~ggg~g~a~ile~  389 (390)
T PRK06504        367 ----------GKRYGLQTMCEGGGMANVTIVER  389 (390)
T ss_pred             ----------CCCeEEEEEeecccceeEEEEEe
Confidence                      12467788887788888888874

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.83  E-value=2.2e-19  Score=199.61  Aligned_cols=246  Identities=17%  Similarity=0.170  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID  281 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~  281 (829)
                      ..|+.+|+++||+|||+++.+||    +++.+..   ..               ..    ....++..+|+++ |...++
T Consensus        26 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~---~~---------------~~----~~~~~~~~lGl~~~~~~~v~   79 (388)
T PRK08142         26 AQLHAEVAKGALADAGLSLADVD----GYFCAGD---AP---------------GL----GPASMVDYLGLKLRHVDSTE   79 (388)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEcCC---CC---------------Cc----cHHHHHHhCCCCCeeecccc
Confidence            46899999999999999999998    5544210   00               00    0134888899975 778899


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH---H----HH------HHHH-cCCCC-----------------
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD---I----HI------KMSK-SGMLS-----------------  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~---~----~~------~~~~-~g~ls-----------------  330 (829)
                      ++|+|+..++..|+++|++|.||+|||+|+|.+....   .    +.      .+.. .|...                 
T Consensus        80 ~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~  159 (388)
T PRK08142         80 TGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGT  159 (388)
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCc
Confidence            9999999999999999999999999999998743210   0    00      0000 01100                 


Q ss_pred             -------------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEe
Q psy11396        331 -------------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGW  376 (829)
Q Consensus       331 -------------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~  376 (829)
                                   ......|+..                     ..+.+.++|||+++||.+++.|++.+ ++.+.|+|+
T Consensus       160 t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~-~~~v~I~g~  238 (388)
T PRK08142        160 TSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK-RPLVKVLGA  238 (388)
T ss_pred             CHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC-CCCEEEEEE
Confidence                         0001112111                     13446779999999999999999876 455889999


Q ss_pred             eeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hc----------cc-CCC
Q psy11396        377 GVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FN----------KF-SYH  444 (829)
Q Consensus       377 ~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~----------~~-~~~  444 (829)
                      +..++................++++||++||++|+|||++|.|.++|..    |...+... |.          +. ...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~----~~~~~E~lGl~~~Ge~~~~v~~g~~~~  314 (388)
T PRK08142        239 GEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT----VLMQLEDLGFCKKGEGGKFVADGNLIS  314 (388)
T ss_pred             EEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH----HHHHHHHcCCCCCCchHHHHHCCCccc
Confidence            9877654322222234455789999999999999999999999998864    44444322 11          11 111


Q ss_pred             -CCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        445 -KNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       445 -~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                       .+.+||+...+.+  |||.||+|+.+++++++||+..
T Consensus       315 ~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~  352 (388)
T PRK08142        315 GVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGE  352 (388)
T ss_pred             CCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCC
Confidence             2568886666665  8999999999999999999873

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=99.83  E-value=1.6e-19  Score=199.77  Aligned_cols=264  Identities=16%  Similarity=0.217  Sum_probs=189.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv  280 (829)
                      ..|+..+.+++|+++|+++++++    -|++|.....                 +.....++..++...||  +-|.+||
T Consensus        30 ~~L~~~~~~~~l~r~~i~~~~id----~vi~G~~~~~-----------------g~~g~n~aR~~al~aglp~~vp~~tv   88 (417)
T PRK06025         30 QHLAATVLKALAERNGLNTADVD----DIIWSTSSQR-----------------GKQGGDLGRMAALDAGYDIKASGVTL   88 (417)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHCC----EEEEEcCCCc-----------------CcccCcHHHHHHHhCCCCCCCCeeee
Confidence            34677889999999999999998    6777744210                 01113356667777777  5699999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHH-----------HHH--cCC---C---C-----------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK-----------MSK--SGM---L---S-----------  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~-----------~~~--~g~---l---s-----------  330 (829)
                      +..|+||+.||.+|+++|++|++|++|+||+|+|+..+.+..           ...  .+.   .   .           
T Consensus        89 nr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~  168 (417)
T PRK06025         89 DRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATM  168 (417)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999885432100           000  000   0   0           


Q ss_pred             ---------------------------------C------------CCCCC-------------CCCC------CCCCc-
Q psy11396        331 ---------------------------------P------------DGHCY-------------SFDQ------RANGF-  345 (829)
Q Consensus       331 ---------------------------------~------------~~~~~-------------pfd~------~~~G~-  345 (829)
                                                       |            +...|             .|..      ..+|. 
T Consensus       169 ~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~  248 (417)
T PRK06025        169 EGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTT  248 (417)
T ss_pred             hCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccc
Confidence                                             0            00001             1321      01232 


Q ss_pred             ------------------------ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHH
Q psy11396        346 ------------------------VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTK  401 (829)
Q Consensus       346 ------------------------~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~  401 (829)
                                              .++|||+++||++++.|++.|.+++++|.|++...+......     .+...++++
T Consensus       249 ~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~~-----~~p~~Ai~~  323 (417)
T PRK06025        249 YRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLML-----NAPVPAAKK  323 (417)
T ss_pred             cccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhc-----ccHHHHHHH
Confidence                                    359999999999999999999999999999998865433211     233579999


Q ss_pred             HHHHcCCCCCCccEEEecCCCCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396        402 IYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       402 Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      +|+++|++++|||++|.|       |......+  .+.++   ....++.++..+..+||+.||+|+..++.++.+|+.+
T Consensus       324 aL~~AGl~~~DID~~ei~-------eaFa~~~l~~~~~lg---~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~  393 (417)
T PRK06025        324 VLAKAGLTKDDIDLWEIN-------EAFAVVAEKFIRDLD---LDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR  393 (417)
T ss_pred             HHHHcCCCHHHCcEEEEc-------hHHHHHHHHHHHHcC---CChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence            999999999999999999       44333332  22333   1234566677777789999999999999999999651


Q ss_pred             CCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        480 VLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       480 ~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                          ..+++++.-.+.||.-.++|||.
T Consensus       394 ------------------------------------g~~~Gl~~~c~~GG~g~A~lle~  416 (417)
T PRK06025        394 ------------------------------------GLKRGLVTMCAAGGMAPAIIIER  416 (417)
T ss_pred             ------------------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence                                                12456888888999999999985

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=99.82  E-value=1.1e-18  Score=193.25  Aligned_cols=275  Identities=16%  Similarity=0.141  Sum_probs=182.5

Q ss_pred             HHHHHHHHHHHHHHcC-CCC-CCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Cccee
Q psy11396        203 QRLFLQNCWTCIEDAG-YNP-FSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAG-l~~-~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t  279 (829)
                      ..|+.+|+++||+||| +++ ++|+    ++++++. ..+.               +  .......++..+|+. .|.+.
T Consensus        26 ~eL~~eA~~~Al~DAG~l~~~~dId----~~~~~~~-~~~~---------------~--~~~~~~~~~~~lg~~~~~~~~   83 (385)
T PRK06066         26 REMMFEAASRAYKDAGNINPRRDVD----SFISCQE-DFWE---------------G--IAIADEFAPDQIGGAMRPTMT   83 (385)
T ss_pred             HHHHHHHHHHHHHhcCCCCChhcCC----EEEEecC-cccC---------------c--ccccchhHHHHcccCCCCeEE
Confidence            4689999999999999 987 7998    7777531 1110               0  001112355677874 47777


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH------------------------HHH------HHHcCCC
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI------------------------HIK------MSKSGML  329 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~------------------------~~~------~~~~g~l  329 (829)
                      |   |+|+..++..|+++|++|.||++||.|++.+.....                        +..      +.+.|..
T Consensus        84 v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t  160 (385)
T PRK06066         84 V---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGIT  160 (385)
T ss_pred             E---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcC
Confidence            6   899999999999999999999999999986533100                        000      0000100


Q ss_pred             C-----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEee
Q psy11396        330 S-----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWG  377 (829)
Q Consensus       330 s-----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~  377 (829)
                      .           ......|...                     ..+.+.++|||+++||.+++.|++.+.++. +|+|++
T Consensus       161 ~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g  239 (385)
T PRK06066        161 REDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIG  239 (385)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEE
Confidence            0           0001111111                     134467899999999999999998887765 899998


Q ss_pred             eecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHHHHHH-h-----------cccC
Q psy11396        378 VNQDGKTNGITA-PNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEALCES-F-----------NKFS  442 (829)
Q Consensus       378 ~~~dg~~~~~~~-p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~Al~~~-~-----------~~~~  442 (829)
                      ...+........ ........+.++||++||++  ++|||++|.|.++|..    |...+... |           .+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~----~l~~~e~lG~~~~Ge~~~~v~~G~~  315 (385)
T PRK06066        240 WSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYK----ELQHIEALRLSEEPEKDSLLREGNF  315 (385)
T ss_pred             EecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHH----HHHHHHHcCCCCCCchHHHHHCCCC
Confidence            866532211111 12333457999999999998  6999999999988854    44333322 1           1112


Q ss_pred             CCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEE
Q psy11396        443 YHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA  520 (829)
Q Consensus       443 ~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a  520 (829)
                      ...+.+||+...+.+  |||.||+|+.+++.+++||+...=.                             .+ ...+++
T Consensus       316 ~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~Ag~-----------------------------rQ-~~a~~~  365 (385)
T PRK06066        316 DPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAGA-----------------------------RQ-GKAERA  365 (385)
T ss_pred             CCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccccc-----------------------------cC-CCCcEE
Confidence            234567888888776  9999999999999999999873100                             01 235678


Q ss_pred             EEeccC--CCCceEEEEee
Q psy11396        521 AINSFG--FSGTNAHIVLM  537 (829)
Q Consensus       521 ~v~s~G--~gG~na~~vl~  537 (829)
                      ++.+.|  ++++.+.+|||
T Consensus       366 l~~~~gg~~~~~~~v~v~~  384 (385)
T PRK06066        366 VVASWRGIPTLTGSVVVVE  384 (385)
T ss_pred             EEcCCCccCCccEEEEEEe
Confidence            888877  56677777776

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.81  E-value=7.6e-19  Score=196.50  Aligned_cols=251  Identities=20%  Similarity=0.181  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhh-HhhhhccCCC-ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPA-RVSYFLNLQG-PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~ia~~lgl~G-p~~t  279 (829)
                      ...|+.+++++||+|+|+++++|+    .+++|+..+++.               +  . .++. .+...+|+.+ |+++
T Consensus        23 ~~el~~~a~~~Al~~agl~p~dID----~vi~g~~~~~~~---------------g--~-~~~~~~~~~~lg~~~~p~~~   80 (393)
T cd00826          23 AHEAGAKAIAAALEPAGVAAGAVE----EACLGQVLGAGE---------------G--Q-NCAQQAAMHAGGLQEAPAIG   80 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEccCCcc---------------c--C-cHHHHHHHHcCCCCCCcEEE
Confidence            456889999999999999999998    788886654431               0  0 1121 2455677765 9999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------HH-HH--------------------HHcCC
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------HI-KM--------------------SKSGM  328 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------~~-~~--------------------~~~g~  328 (829)
                      |+++|+|++.|+..|+++|++|++|++||+|+|.++....          +. .+                    ...|.
T Consensus        81 V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~G~  160 (393)
T cd00826          81 MNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGR  160 (393)
T ss_pred             ecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999998753210          00 00                    01111


Q ss_pred             CC--------CC--C----CCCCCCC------------------------CCCCcccccceEEEEEccchhhhhCCC-ce
Q psy11396        329 LS--------PD--G----HCYSFDQ------------------------RANGFVPGEGVGVLMLKKLKDAKKDGD-DI  369 (829)
Q Consensus       329 ls--------~~--~----~~~pfd~------------------------~~~G~~~gEGaaalvL~~~~~A~~~g~-~i  369 (829)
                      ..        ..  +    ...|+..                        ..+.+.++|||+++||.+++.|++.+. ..
T Consensus       161 ~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~  240 (393)
T cd00826         161 FKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSK  240 (393)
T ss_pred             CHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCccc
Confidence            10        00  0    0012211                        112245689999999999999998774 11


Q ss_pred             EEEEEEeeeecCCCCCC-CCC----CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hcc---
Q psy11396        370 YCIIKGWGVNQDGKTNG-ITA----PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FNK---  440 (829)
Q Consensus       370 ~a~I~g~~~~~dg~~~~-~~~----p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~~---  440 (829)
                      ..+|.+.+...+..... .+.    ....+...++++||++||++++|||++|.|.+++..    |...+..+ |..   
T Consensus       241 ~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~----~l~~~e~lgl~~~g~  316 (393)
T cd00826         241 AREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAAN----ACATNEALGLCPEGQ  316 (393)
T ss_pred             ccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHH----HHHHHHHhCCCcccc
Confidence            23444444332211110 000    123345789999999999999999999999776643    44444332 111   


Q ss_pred             --------cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhc
Q psy11396        441 --------FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKH  478 (829)
Q Consensus       441 --------~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~  478 (829)
                              .....+..||+...+.+  |||.||+|+.+++.++++|+.
T Consensus       317 ~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g  364 (393)
T cd00826         317 GGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKG  364 (393)
T ss_pred             hhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhh
Confidence                    11122346787777765  999999999999999999976

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=99.80  E-value=1.2e-18  Score=196.18  Aligned_cols=275  Identities=16%  Similarity=0.177  Sum_probs=185.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh--ccCCCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF--LNLQGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~--lgl~Gp~~tv  280 (829)
                      ..|+.+++++||+|+|+++++++    .+++|.....-                  ....++..++..  ++...|+++|
T Consensus        32 ~eL~~~a~~~al~~agl~~~~Id----~vv~G~~~~~~------------------~~~~~~r~~~l~~gl~~~~p~~~V   89 (427)
T PRK09268         32 QDMLTAALDGLVDRFGLQGERLG----EVVAGAVLKHS------------------RDFNLTRECVLGSALSPYTPAYDL   89 (427)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC------------------ccccHHHHHHHHcCCCCCCceeee
Confidence            46889999999999999999999    77777432100                  001133443444  4446899999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH----------------------------HHH------H-
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI----------------------------KMS------K-  325 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~----------------------------~~~------~-  325 (829)
                      +++|+||+.|+..|+++|++|.+|++||||+|.++......                            ...      . 
T Consensus        90 ~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (427)
T PRK09268         90 QQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRN  169 (427)
T ss_pred             echhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccCccc
Confidence            99999999999999999999999999999999876421100                            000      0 


Q ss_pred             ----cCC-C-------------C----------------C-------CCCCCCC-------------------------C
Q psy11396        326 ----SGM-L-------------S----------------P-------DGHCYSF-------------------------D  339 (829)
Q Consensus       326 ----~g~-l-------------s----------------~-------~~~~~pf-------------------------d  339 (829)
                          .+. +             +                .       +....|+                         +
T Consensus       170 ~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e~l~~~~~v~~  249 (427)
T PRK09268        170 GEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLEKLAKLKPVFG  249 (427)
T ss_pred             cccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHHHHhCCCcccc
Confidence                011 0             0                0       0001222                         1


Q ss_pred             C-------CCCCcccccceEEEEEccchhhhhCCCceEEEE-EEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy11396        340 Q-------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCII-KGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN  411 (829)
Q Consensus       340 ~-------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~  411 (829)
                      .       ..+.+.++|||+++||.+++.|++.+.++.++| .+.....+.....  .....+...+++++|++||++|+
T Consensus       250 p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~--~~~~~~~~~a~~~a~~~AGl~~~  327 (427)
T PRK09268        250 KGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGK--EGLLMAPAYAVPRLLARNGLTLQ  327 (427)
T ss_pred             cCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccccc--chhhccHHHHHHHHHHHcCCCHH
Confidence            1       112356799999999999999999888887776 5555555532110  00112445699999999999999


Q ss_pred             CccEEEecCCCCCCCChHHHHHHHHH-hcccCC-------CCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCC
Q psy11396        412 DIQLLEAHGTGTKLGDPIEFEALCES-FNKFSY-------HKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVL  481 (829)
Q Consensus       412 dId~ve~hgtgt~~gD~~E~~Al~~~-~~~~~~-------~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~i  481 (829)
                      |||++|.|.+++.. -..|...+... |.....       .....||+...+.+  |||.||+|+..++.++++|+.+  
T Consensus       328 Did~~Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~~--  404 (427)
T PRK09268        328 DFDFYEIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEK--  404 (427)
T ss_pred             HCCEEEeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHhc--
Confidence            99999999877643 11222222111 110000       01146777777766  9999999999999999999761  


Q ss_pred             CCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       482 pp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                        ..++++++..+-||.-.++|||.
T Consensus       405 ----------------------------------~~~~gl~~~c~~gG~g~a~~~e~  427 (427)
T PRK09268        405 ----------------------------------GSGRGLISICAAGGQGVTAILER  427 (427)
T ss_pred             ----------------------------------CCCEEEEEEcccCchheEEEEeC
Confidence                                              23578999999999999999983

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.80  E-value=9.8e-19  Score=195.39  Aligned_cols=224  Identities=15%  Similarity=0.199  Sum_probs=154.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceee
Q psy11396        201 PQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAI  280 (829)
Q Consensus       201 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv  280 (829)
                      ....|+.+|+++||++||+++++++    .+++++...++.                  ....+..++..+|+++|++++
T Consensus        94 ~~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~~~~~~------------------~p~~a~~v~~~Lgl~~~~~~v  151 (372)
T PRK07515         94 IQAEMGVAAARQALARAGRTAEDID----AVIVACSNMQRA------------------YPAMAIEIQQALGIEGFAFDM  151 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CcHHHHHHHHhcCCCCcEEEe
Confidence            4467999999999999999999988    778876532221                  112356788999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.+|.+||+|+|.+....                  -|+....++++||||+|+||++.+
T Consensus       152 ~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~d~~~~~lfGDgAaA~vL~~~~  213 (372)
T PRK07515        152 NVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL------------------NFRDRDSHFIFGDVATAVIVERAD  213 (372)
T ss_pred             cchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------cccCCCCCEEecCccEEEEEeecc
Confidence            99999999999999999999999999999999853211                  122234679999999999999876


Q ss_pred             hhhhCC-CceEEEEEEe------------eeecCCCCCCCCCC----CHH--------HHHHHHHHHHHHcCCCCCCccE
Q psy11396        361 DAKKDG-DDIYCIIKGW------------GVNQDGKTNGITAP----NTK--------SQIRLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       361 ~A~~~g-~~i~a~I~g~------------~~~~dg~~~~~~~p----~~~--------~~~~ai~~Al~~Agl~~~dId~  415 (829)
                      .+..++ ..+++.....            ....+..+.....+    ++.        ...++++++|+++|++++||||
T Consensus       214 ~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~  293 (372)
T PRK07515        214 TATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKR  293 (372)
T ss_pred             ccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence            654322 2455543211            00001110000000    222        2578999999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396        416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK  471 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~  471 (829)
                      |.+|.+++...|.+    +.++|+-.... ...+.  .-..+||+.+|+=...|..
T Consensus       294 ~~~Hq~~~~~~d~~----~~~llg~~~~~-~~~~~--~~~~~GNt~sasi~~~L~~  342 (372)
T PRK07515        294 FWLHQANINMNQLI----GKKVLGRDATP-EEAPV--ILDEYANTSSAGSIIAFHK  342 (372)
T ss_pred             EEECCCCHHHHHHH----HHHhccCCCCh-hhceE--eHHhcCCchhhHHHHHHHH
Confidence            99999999987765    33445521111 11121  2356799999986554443

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.79  E-value=8.2e-18  Score=184.73  Aligned_cols=260  Identities=17%  Similarity=0.163  Sum_probs=179.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+..+.++++  +|++ ++++    .||+|...+.                   . ..++..++...|+.  -|+++|
T Consensus        26 ~~L~~~a~~~~~--~gi~-~~Id----~vi~G~~~~~-------------------~-~~~~r~~~~~~Gl~~~~p~~tV   78 (361)
T PRK06690         26 QQLAAPLLTFLS--KGME-REID----DVILGNVVGP-------------------G-GNVARLSALEAGLGLHIPGVTI   78 (361)
T ss_pred             HHHHHHHHHHHH--ccch-hhcC----EEEEEecCCC-------------------c-chHHHHHHHHcCCCCCCCceeh
Confidence            567788888874  4886 7888    7888744211                   0 12233467778885  499999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--H------------------HHHHcCCC----------C
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--I------------------KMSKSGML----------S  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--~------------------~~~~~g~l----------s  330 (829)
                      +++|+||+.|+..|+++|++|++|++||||+|.++.....  .                  ...+.|..          +
T Consensus        79 ~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s  158 (361)
T PRK06690         79 DRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLS  158 (361)
T ss_pred             hhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999988642110  0                  00000000          0


Q ss_pred             --------CCCC---------------C--------------CCCCC-----CCCCcccccceEEEEEccchhhhhCCCc
Q psy11396        331 --------PDGH---------------C--------------YSFDQ-----RANGFVPGEGVGVLMLKKLKDAKKDGDD  368 (829)
Q Consensus       331 --------~~~~---------------~--------------~pfd~-----~~~G~~~gEGaaalvL~~~~~A~~~g~~  368 (829)
                              ..+.               .              ..|+.     ..+...++|||+++||.+++.|++.|.+
T Consensus       159 ~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~  238 (361)
T PRK06690        159 YKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYK  238 (361)
T ss_pred             HHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCC
Confidence                    0000               0              11211     1223557999999999999999999999


Q ss_pred             eEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcc
Q psy11396        369 IYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFC  448 (829)
Q Consensus       369 i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~  448 (829)
                      +.++|.|++.......  .   ...+...+++++|+++|++|+|||++|.|.+.+..    +...+. .++   ....++
T Consensus       239 p~~~i~~~~~~~~~~~--~---~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~----~~~~~e-~lg---l~~~~v  305 (361)
T PRK06690        239 PVLRFVRSAVVGVDPN--L---PGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASK----VVACAK-ELQ---IPYEKL  305 (361)
T ss_pred             ceEEEEEEEEeccCcc--c---chhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHH----HHHHHH-hcC---CCchhc
Confidence            9889999887643221  1   13466789999999999999999999999544422    222222 222   112234


Q ss_pred             ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCC
Q psy11396        449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS  528 (829)
Q Consensus       449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~g  528 (829)
                      .++...-.+||+.|++|+.+++.++.+|++.                                    ..++.+++...-|
T Consensus       306 n~~GG~la~Ghp~GatG~~~~~~~~~ql~~~------------------------------------~~~~g~~~~c~~g  349 (361)
T PRK06690        306 NVNGGAIALGHPYGASGAMLVTRLFYQAKRE------------------------------------DMKYGIATLGIGG  349 (361)
T ss_pred             ccCCcHHhccCchhhhHHHHHHHHHHHHHHh------------------------------------CCCEEEEEEcccC
Confidence            4444444569999999999999999999651                                    1356778888888


Q ss_pred             CceEEEEeee
Q psy11396        529 GTNAHIVLME  538 (829)
Q Consensus       529 G~na~~vl~e  538 (829)
                      |.-.++|||.
T Consensus       350 G~g~a~~~e~  359 (361)
T PRK06690        350 GIGLALLFEK  359 (361)
T ss_pred             cceeEEEEEe
Confidence            9899999985

>KOG1390|consensus

Probab=99.79  E-value=2.3e-19  Score=182.19  Aligned_cols=239  Identities=18%  Similarity=0.250  Sum_probs=169.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      .++|+-.+.+.||+++.+++.+++..-.|.++....                      ...++.+.+..-||  .-|++|
T Consensus        30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl----------------------GQapaRQaalgAGlp~sv~~tT   87 (396)
T KOG1390|consen   30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL----------------------GQAPARQAALGAGLPYSVPATT   87 (396)
T ss_pred             hhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc----------------------CcchHHHHHhhcCCCcceeeEe
Confidence            567888999999999999988877444444443322                      23345566666666  469999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCC-------------------------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGM-------------------------------  328 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~-------------------------------  328 (829)
                      |+--|+||+.|+.+|++.|+.|..|++++||.|+|+..+. ....+.+.                               
T Consensus        88 vNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~-~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~  166 (396)
T KOG1390|consen   88 VNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPY-LYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAEN  166 (396)
T ss_pred             ehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcc-hhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHhh
Confidence            9999999999999999999999999999999999987652 11111111                               


Q ss_pred             -------------------------------CC------------------CCC-C-----------CC-CCCC------
Q psy11396        329 -------------------------------LS------------------PDG-H-----------CY-SFDQ------  340 (829)
Q Consensus       329 -------------------------------ls------------------~~~-~-----------~~-pfd~------  340 (829)
                                                     +.                  .+. .           .+ -|-.      
T Consensus       167 ~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTVT  246 (396)
T KOG1390|consen  167 TAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTVT  246 (396)
T ss_pred             hHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCCeec
Confidence                                           00                  000 0           00 0100      


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      ..+-..+.|||+|+||.+.+.+.+.|.+|+|+|.+|+-.......-...|     .-++.++|++||+..+||||+|.+ 
T Consensus       247 aaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP-----~laipk~lk~aG~~~sdVd~~EiN-  320 (396)
T KOG1390|consen  247 AANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAP-----ALAIPKALKKAGLEQSDVDYWEIN-  320 (396)
T ss_pred             cccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccch-----HHHHHHHHHHcCcchhhhhHHhhh-
Confidence            11224579999999999999999999999999999986543332222333     458999999999999999999988 


Q ss_pred             CCCCCCChHHHHHHHHHhc--ccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhc
Q psy11396        421 TGTKLGDPIEFEALCESFN--KFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKH  478 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~--~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~  478 (829)
                               |+.+...+..  ........+.+..---.+|||+|+||+.-++..++.|+.
T Consensus       321 ---------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~  371 (396)
T KOG1390|consen  321 ---------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ  371 (396)
T ss_pred             ---------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence                     6554432211  112223345555555568999999999999999999977

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.75  E-value=5.9e-17  Score=178.29  Aligned_cols=246  Identities=15%  Similarity=0.180  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC---cce
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG---PCL  278 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G---p~~  278 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++                  .....+.+|+..+|+++   |++
T Consensus        52 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~------------------~~p~~a~~v~~~lgl~~~~~~~~  109 (329)
T PRK07204         52 SSYMGAEAAKKAVEDAKLTLDDID----CIICASGTIQQ------------------AIPCTASLIQEQLGLQHSGIPCF  109 (329)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCC------------------CCccHHHHHHHHhCCCCCCceEE
Confidence            467999999999999999999998    67777654332                  11245678999999974   889


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK  358 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~  358 (829)
                      .|+.+|+|++.||..|.++|++|.++.+||+++|.+....                  .++....++++||||+|+||++
T Consensus       110 ~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~lfGDGAaA~ll~~  171 (329)
T PRK07204        110 DINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL------------------NWGQNESCILFGDGAAAVVITK  171 (329)
T ss_pred             EccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC------------------CcccCcceEEEecccEEEEEEE
Confidence            9999999999999999999999999999999999753211                  1223345788999999999997


Q ss_pred             chhhhhCCCceE-------------EEEEEeeeecCCCCCCC-------CCCCH--------HHHHHHHHHHHHHcCCCC
Q psy11396        359 LKDAKKDGDDIY-------------CIIKGWGVNQDGKTNGI-------TAPNT--------KSQIRLQTKIYKKFNINP  410 (829)
Q Consensus       359 ~~~A~~~g~~i~-------------a~I~g~~~~~dg~~~~~-------~~p~~--------~~~~~ai~~Al~~Agl~~  410 (829)
                      .+..    .++.             ..+.+.+...+......       ...++        ....++++++|+++|+++
T Consensus       172 ~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~  247 (329)
T PRK07204        172 GDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL  247 (329)
T ss_pred             cCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            5432    1222             22222222111100000       00011        124588999999999999


Q ss_pred             CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy11396        411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL  490 (829)
Q Consensus       411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~  490 (829)
                      +|||++.+|..+...     .+++.+.++-.   .+.  +......+||+.+|+=...|..+   ++.+.+.        
T Consensus       248 ~did~~~~H~~~~~~-----~~~i~~~l~l~---~e~--~~~~~~~~Gn~~sas~~~~L~~~---~~~g~~~--------  306 (329)
T PRK07204        248 ADIDLIVPHQASGPA-----MRLIRKKLGVD---EER--FVTIFEDHGNMIAASIPVALFEA---IKQKKVQ--------  306 (329)
T ss_pred             HHCCEEEeCCCCHHH-----HHHHHHHcCCC---HHH--hhhhHhhhCcHHHHHHHHHHHHH---HHcCCCC--------
Confidence            999999999887654     44566666531   111  23456678999988866666544   3333221        


Q ss_pred             CccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        491 NEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       491 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                               +..+++..+||.|-+-++++|+
T Consensus       307 -------------------------~Gd~vll~~~G~G~s~~~~ll~  328 (329)
T PRK07204        307 -------------------------RGNKILLLGTSAGLSIGGILLE  328 (329)
T ss_pred             -------------------------CCCEEEEEEEchhhhheeeEEe
Confidence                                     2356889999999999888886

>KOG1406|consensus

Probab=99.75  E-value=2.6e-18  Score=169.89  Aligned_cols=248  Identities=19%  Similarity=0.235  Sum_probs=179.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeeccc
Q psy11396        205 LFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAIDTA  283 (829)
Q Consensus       205 l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~~a  283 (829)
                      ++.+|...||+|+|+...+++...+|.++|.+                         ....|.-|.+|++| |.+.|++.
T Consensus        32 ~a~ea~tkal~da~ikys~vqqa~vgyvfgds-------------------------tcgqraiyevgmtgipi~nvnnn   86 (408)
T KOG1406|consen   32 FAKEAITKALQDAGIKYSEVQQAVVGYVFGDS-------------------------TCGQRAIYEVGMTGIPIYNVNNN   86 (408)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHhhhheeeecCC-------------------------ccchHHHHhccccCcceeeccCc
Confidence            56789999999999999999988889888843                         33446667899999 99999999


Q ss_pred             hhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH------------------------------H--------HHHH
Q psy11396        284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH------------------------------I--------KMSK  325 (829)
Q Consensus       284 csSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------------------------------~--------~~~~  325 (829)
                      |++|..||.+|.+.|++|.+|++|+.|.|.|..-...                              .        .+.+
T Consensus        87 catgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehmek  166 (408)
T KOG1406|consen   87 CATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGNAGKEHMEK  166 (408)
T ss_pred             cccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhhhHHHHHHH
Confidence            9999999999999999999999999999976421000                              0        0000


Q ss_pred             cCCC-----------CCCCCCCCCCCCCCC---------------------cccccceEEEEEccchhhhhCCCceEE-E
Q psy11396        326 SGML-----------SPDGHCYSFDQRANG---------------------FVPGEGVGVLMLKKLKDAKKDGDDIYC-I  372 (829)
Q Consensus       326 ~g~l-----------s~~~~~~pfd~~~~G---------------------~~~gEGaaalvL~~~~~A~~~g~~i~a-~  372 (829)
                      .|.-           ..+....||++-++-                     +..+||+++.+|.++...++.|..-.| +
T Consensus       167 ygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~gl~~qave  246 (408)
T KOG1406|consen  167 YGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVE  246 (408)
T ss_pred             hCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHH
Confidence            0000           011223455443332                     456999999999999988888866555 4


Q ss_pred             EEEeeeecCCCCCC-----CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcc-------
Q psy11396        373 IKGWGVNQDGKTNG-----ITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK-------  440 (829)
Q Consensus       373 I~g~~~~~dg~~~~-----~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~-------  440 (829)
                      |.|..+.+|..+.-     +-....+....+.++.+++.|++|.||++||.|++..+ ++.+-.+||.-+-.+       
T Consensus       247 ivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglcpegqg~~~vd  325 (408)
T KOG1406|consen  247 IVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLCPEGQGGEFVD  325 (408)
T ss_pred             HHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCCCCCCCceeee
Confidence            78877777754321     11122456678899999999999999999999999875 455555565322110       


Q ss_pred             --cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhc
Q psy11396        441 --FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKH  478 (829)
Q Consensus       441 --~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~  478 (829)
                        ...-.+.+.|+...++|  |||+||+|+++.++...+||.
T Consensus       326 rgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg  367 (408)
T KOG1406|consen  326 RGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG  367 (408)
T ss_pred             cCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence              11122345566666665  999999999999999999986

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.73  E-value=1.1e-16  Score=170.75  Aligned_cols=289  Identities=18%  Similarity=0.280  Sum_probs=192.1

Q ss_pred             CEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        116 DIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       116 ~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      .+.|+|+|...|. ..+.+++-..+.....+|.....                                       |-++
T Consensus         3 ~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtG---------------------------------------ir~R   43 (323)
T COG0332           3 NAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTG---------------------------------------IRER   43 (323)
T ss_pred             cceEEEEEeecCCcccChHHHHhccCCCcceeeeecC---------------------------------------Ccee
Confidence            5689999999999 56777776444444333333221                                       1111


Q ss_pred             Hhhc-CCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EAEY-MDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~~~-~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      .... -.....|+.+|+++||++||+++++|+    .+++.+..+++.                  .+..|..|...||+
T Consensus        44 ~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dID----lII~aT~tpd~~------------------~Ps~A~~vq~~LG~  101 (323)
T COG0332          44 RIAADDETTSDLAVEAARKALEDAGISPDDID----LIIVATSTPDHL------------------FPSTACLVQARLGL  101 (323)
T ss_pred             eecCCCccHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCcccC------------------CChHHHHHHHHhCC
Confidence            1111 223567999999999999999999999    899998876652                  34568899999999


Q ss_pred             CC-cceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceE
Q psy11396        274 QG-PCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG  352 (829)
Q Consensus       274 ~G-p~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaa  352 (829)
                      ++ +.+.++++|++.++||..|..+|++|.++.+||+|.|.++...                  -|+.+...+.+||||+
T Consensus       102 ~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~l------------------d~~dR~t~vlFgDGAg  163 (323)
T COG0332         102 GGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRIL------------------DWTDRDTCVLFGDGAG  163 (323)
T ss_pred             CCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccC------------------CHhhccceEEEcCCce
Confidence            87 9999999999999999999999999999999999999863211                  1334457788999999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeecCCCCC-------------------CCCCCC--------HHHHHHHHHHHHHH
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN-------------------GITAPN--------TKSQIRLQTKIYKK  405 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~-------------------~~~~p~--------~~~~~~ai~~Al~~  405 (829)
                      |+||++.+  .+.|      |..+...+||...                   ....-.        ...+.++++++|++
T Consensus       164 Avvl~~~~--~~~~------i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~  235 (323)
T COG0332         164 AVVLEATE--DDNG------ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEK  235 (323)
T ss_pred             EEEEecCC--CCcC------eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999876  1122      2222222232110                   000011        23457899999999


Q ss_pred             cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCC
Q psy11396        406 FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTI  485 (829)
Q Consensus       406 Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~  485 (829)
                      ++++++|||++..|=..     .-=.+++.+.++-   +.++..+  .-...|++.+||=...|.++   ++.|.|.|  
T Consensus       236 ~~l~~~dId~~vpHQan-----~ri~~~i~~~l~~---~~~k~~~--~~~~yGNtsaAsiplaL~~~---~~~g~ik~--  300 (323)
T COG0332         236 AGLTPEDIDWFVPHQAN-----LRIIEAIAKKLGI---PEEKVVV--TVDKYGNTSAASIPLALDEA---LREGRIKP--  300 (323)
T ss_pred             cCCCHHHCCEEcccccc-----HHHHHHHHHHcCC---CHHHHhh--HHHHhcccccchHHHHHHHH---hhhCCCCC--
Confidence            99999999999999222     1223344444442   1222222  22235888888755555543   34443321  


Q ss_pred             CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                                     ..+.++.+||-|=+-.+++++
T Consensus       301 -------------------------------Gd~ill~~fG~Gltwg~~~~r  321 (323)
T COG0332         301 -------------------------------GDLVLLEAFGGGLTWGAALVR  321 (323)
T ss_pred             -------------------------------CCEEEEEeecCcceeeeEEEE
Confidence                                           245778888876666666654

>PRK07855 lipid-transfer protein; Provisional

Probab=99.73  E-value=3e-16  Score=175.02  Aligned_cols=242  Identities=12%  Similarity=0.084  Sum_probs=162.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv  280 (829)
                      ..|+.+|+++||+|||+++++|+    +++++...  .                  ..   ...++..+|+++  |...|
T Consensus        25 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~~--~------------------~~---~~~l~~~lGl~~~~~~~~v   77 (386)
T PRK07855         25 LRLACEAVLAALDDAGLAPSDVD----GLVTFTMD--T------------------NP---EIAVARALGIGELKFFSRI   77 (386)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEecCc--c------------------cc---HHHHHHHCCCCCCcceeee
Confidence            45899999999999999999998    66653210  0                  00   134888899976  44578


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEecc--ccccChH------------H---HHHHHH-cCCCC------------
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGV--YIINTPD------------I---HIKMSK-SGMLS------------  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~--e~~~~~~------------~---~~~~~~-~g~ls------------  330 (829)
                      ..+|+|+..+|..|++.|++|.||+|||.|+  +......            .   ...+.. .|...            
T Consensus        78 ~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~y  157 (386)
T PRK07855         78 HYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARRY  157 (386)
T ss_pred             cCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHHH
Confidence            9999999999999999999999999999988  2210000            0   000000 11100            


Q ss_pred             -------------------CCCCCCCCCCC----------------------CCCcccccceEEEEEccchhhhhCCCce
Q psy11396        331 -------------------PDGHCYSFDQR----------------------ANGFVPGEGVGVLMLKKLKDAKKDGDDI  369 (829)
Q Consensus       331 -------------------~~~~~~pfd~~----------------------~~G~~~gEGaaalvL~~~~~A~~~g~~i  369 (829)
                                         ......|+...                      -+.+.++|||+++||.+++.|++.+.++
T Consensus       158 m~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p  237 (386)
T PRK07855        158 MHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDLKQRP  237 (386)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhCCCCC
Confidence                               00111122111                      3446679999999999999999887666


Q ss_pred             EEEEEEeeeecCCCCCCC-----CC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH------
Q psy11396        370 YCIIKGWGVNQDGKTNGI-----TA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES------  437 (829)
Q Consensus       370 ~a~I~g~~~~~dg~~~~~-----~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~------  437 (829)
                       .+|+|++..++......     .. ........++++||++||++|+|||++|.|.++|..    |...+...      
T Consensus       238 -v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~----~l~~~E~lG~~~~G  312 (386)
T PRK07855        238 -AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF----VLMQLEELGFCGRG  312 (386)
T ss_pred             -EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH----HHHHHHHcCCCCCC
Confidence             48999987654331110     01 112344579999999999999999999999998864    44443322      


Q ss_pred             -----h-cccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396        438 -----F-NKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       438 -----~-~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~  479 (829)
                           + .+.....+.+||+...+.+  ||+.   |+.+++++++||+..
T Consensus       313 e~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~  359 (386)
T PRK07855        313 EAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGT  359 (386)
T ss_pred             cHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCC
Confidence                 1 1122334568896666655  7876   899999999999984

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=99.73  E-value=3.2e-16  Score=179.62  Aligned_cols=271  Identities=13%  Similarity=0.064  Sum_probs=182.4

Q ss_pred             HHHHHHHHHHHHHHcCCC--CCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-ccee
Q psy11396        203 QRLFLQNCWTCIEDAGYN--PFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~--~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t  279 (829)
                      ..|+.+|+++||+|||++  +.+|+    +++++.... +                  .....+..++..+|+.. +...
T Consensus        28 ~~L~~eA~~~Al~DAGl~~~~~dID----~v~v~~~~~-~------------------~~~~~~~~la~~lGl~p~~~~~   84 (498)
T PRK08257         28 VDLMAAAARAAAADAGADAVLEAID----SVAVVNQLS-W------------------RYRDPPGLLAERLGADPARTVY   84 (498)
T ss_pred             HHHHHHHHHHHHHhcCCCcCHHHCC----EEEEecccc-c------------------cccCHHHHHHHHcCCCCcceeE
Confidence            568999999999999999  88998    777763321 0                  01223467888999964 4445


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH----------------------------HHH-HcCCCC
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI----------------------------KMS-KSGMLS  330 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~----------------------------~~~-~~g~ls  330 (829)
                      ...+|+|+..+|..|+++|++|+||+|||+|+|.+.+.....                            .+. ..|...
T Consensus        85 ~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~  164 (498)
T PRK08257         85 SPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDR  164 (498)
T ss_pred             ecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCC
Confidence            667888999999999999999999999999999754221000                            000 011110


Q ss_pred             -----------------------------------------CCC-CCCCCCCC------------------CCCc-cccc
Q psy11396        331 -----------------------------------------PDG-HCYSFDQR------------------ANGF-VPGE  349 (829)
Q Consensus       331 -----------------------------------------~~~-~~~pfd~~------------------~~G~-~~gE  349 (829)
                                                               |.. ..+|++.+                  -+.. ...|
T Consensus       165 p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~D  244 (498)
T PRK08257        165 PVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVD  244 (498)
T ss_pred             cchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcc
Confidence                                                     000 00111100                  1112 3699


Q ss_pred             ceEEEEEccchhhhhCCC--ceEEEEEEeeeecCCCCCC-CC-CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396        350 GVGVLMLKKLKDAKKDGD--DIYCIIKGWGVNQDGKTNG-IT-APNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL  425 (829)
Q Consensus       350 GaaalvL~~~~~A~~~g~--~i~a~I~g~~~~~dg~~~~-~~-~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~  425 (829)
                      |++++||.+++.|++.+.  .....|.|++..++..... .. .........+.++||++||++++|||++|.|.+++..
T Consensus       245 GaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~  324 (498)
T PRK08257        245 QGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSA  324 (498)
T ss_pred             cceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHH
Confidence            999999999999998873  2346789998887753221 11 1123345579999999999999999999999998754


Q ss_pred             CChHHHHHHHHH-hcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        426 GDPIEFEALCES-FNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       426 gD~~E~~Al~~~-~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                          |..++..+ |..    .+..|++...++  .||+.+++|+.++++++.+|+.+                       
T Consensus       325 ----~~~~~E~LGl~~----~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~-----------------------  373 (498)
T PRK08257        325 ----VQVAARELGLDL----DDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN-----------------------  373 (498)
T ss_pred             ----HHHHHHHcCcCC----CCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc-----------------------
Confidence                65555544 222    123566555555  49999999999999999999863                       


Q ss_pred             eccccccccccccCccEEEEeccC-CCCceEEEEeeecc
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFG-FSGTNAHIVLMEKI  540 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G-~gG~na~~vl~e~~  540 (829)
                                   ..+++++.+.| ++..++..|++..|
T Consensus       374 -------------~~~~gLv~~~GG~~~~~~~~vl~~~p  399 (498)
T PRK08257        374 -------------PGRRGLVTANGGYLTKHSVGVYSTEP  399 (498)
T ss_pred             -------------CCCEEEEECCCChhhceEEEEEeCCC
Confidence                         12468888876 55556666776543

>PRK07937 lipid-transfer protein; Provisional

Probab=99.72  E-value=4.4e-16  Score=170.89  Aligned_cols=239  Identities=12%  Similarity=0.048  Sum_probs=153.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-C-cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-G-PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-G-p~~tv  280 (829)
                      ..|+.+|+++||+|||+++++|+    +++.+..  ++.              .+....  ...++..+|+. + |...+
T Consensus        25 ~el~~eA~~~Al~DAgl~~~dID----~~~~~~~--~~~--------------~~~~~~--~~~~~~~~G~~~~~~~~~v   82 (352)
T PRK07937         25 VEMLMPCFAELYAELGITKSDIG----FWCSGSS--DYL--------------AGRAFS--FISAIDSIGAVPPINESHV   82 (352)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcc--ccc--------------cccccc--hhhHHhhccCCCCCceEEe
Confidence            56999999999999999999998    5544321  110              000000  11234456663 2 34445


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------------HH------HHHHcCCCC--
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------------HI------KMSKSGMLS--  330 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------------~~------~~~~~g~ls--  330 (829)
                      .   ++|..||..|+.+|++|.||++||.|+|.+.....                      +.      ++.+.|...  
T Consensus        83 ~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~  159 (352)
T PRK07937         83 E---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQ  159 (352)
T ss_pred             c---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHH
Confidence            4   46888999999999999999999999986531000                      00      000001000  


Q ss_pred             ---------CCCCCCCCCC-------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCC
Q psy11396        331 ---------PDGHCYSFDQ-------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDG  382 (829)
Q Consensus       331 ---------~~~~~~pfd~-------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg  382 (829)
                               ......|+..                   ..+.+.++|||+++||.+.+.|++.+.++ +.|.|++...+.
T Consensus       160 lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~  238 (352)
T PRK07937        160 MAEVAARSRADARRNPSAEPSISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIES  238 (352)
T ss_pred             HHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCC
Confidence                     0011122111                   12445689999999999999999988777 899999887665


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCc-Ccc
Q psy11396        383 KTNGITAPNTKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI-GHS  460 (829)
Q Consensus       383 ~~~~~~~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~-GH~  460 (829)
                      ........   ....++++++++ ||++|+|||++|.|.+++..    |...+... +-    .+.+||+...+.+ ||+
T Consensus       239 ~~~~~~d~---~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~~----~l~~~e~l-Gl----~g~~pvN~~GG~l~ghp  306 (352)
T PRK07937        239 PSLGARDL---TRSPSTALAAEAATGGDAGGVDVAELHAPFTHQ----ELILREAL-GL----GDKTKVNPSGGALAANP  306 (352)
T ss_pred             cccccccc---ccHHHHHHHHHHhcCCCHHHCCEEEEeCCChHH----HHHHHHHc-CC----CCCCCcCCCccchhcCc
Confidence            43211111   112344556666 59999999999999888754    55544432 21    1235665555543 999


Q ss_pred             hhhhhHHHHHHHHHHHhcC
Q psy11396        461 ATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       461 ~gAsG~~~li~~~l~L~~~  479 (829)
                      .||+|+.+++++++||+.+
T Consensus       307 ~gatG~~~~~e~~~QL~g~  325 (352)
T PRK07937        307 MFAAGLERIGEAARHIWDG  325 (352)
T ss_pred             hhHHHHHHHHHHHHHHhcc
Confidence            9999999999999999874

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.72  E-value=2.5e-16  Score=172.69  Aligned_cols=241  Identities=17%  Similarity=0.262  Sum_probs=166.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++|+...++.                  ....+.+|+..+|+.+ |.++|
T Consensus        52 ~~~la~~A~~~al~~agl~~~~id----~vi~~~~~~~~~------------------~~~~~~~i~~~lG~~~~~~~~v  109 (319)
T PRK09352         52 TSDLATEAAKKALEAAGIDPEDID----LIIVATTTPDYA------------------FPSTACLVQARLGAKNAAAFDL  109 (319)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CchHHHHHHHHhCCCCCcEeec
Confidence            578999999999999999999988    788886543221                  1124678999999987 88999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.+|.+||+|+|.+....                  .++....++++||||+|+||++.+
T Consensus       110 ~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~gDGaaA~ll~~~~  171 (319)
T PRK09352        110 SAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV------------------DWTDRSTCVLFGDGAGAVVLGASE  171 (319)
T ss_pred             cccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEEcC
Confidence            99999999999999999999999999999999854211                  011223467899999999999865


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCCC--------CCCCC--------C--------HHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKTN--------GITAP--------N--------TKSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~~--------~~~~p--------~--------~~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                      ..     .    +.++...+++...        ....|        .        .....++++++|+++|++++||+|+
T Consensus       172 ~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~  242 (319)
T PRK09352        172 EP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWL  242 (319)
T ss_pred             CC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            42     1    2222222222110        00000        0        1234568999999999999999999


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL  496 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~  496 (829)
                      .+|..+...     ...+.+.++-   ..+.+  ...-..+||+.+|+-.+.|..++   +.|.+.              
T Consensus       243 ~~h~~~~~~-----~~~~~~~lg~---~~~~~--~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~~--------------  295 (319)
T PRK09352        243 VPHQANLRI-----IDATAKKLGL---PMEKV--VVTVDKYGNTSAASIPLALDEAV---RDGRIK--------------  295 (319)
T ss_pred             EECCCCHHH-----HHHHHHHhCC---CHHHh--hhhHHhhCCHHHHHHHHHHHHHH---HcCCCC--------------
Confidence            999654332     2334444432   11112  22345689999999887776554   333221              


Q ss_pred             CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                         ...+.++-|||.|-+-.+++|+
T Consensus       296 -------------------~Gd~vll~s~G~G~~~~~~ll~  317 (319)
T PRK09352        296 -------------------RGDLVLLEGFGGGLTWGAALVR  317 (319)
T ss_pred             -------------------CCCEEEEEEEchhheeEEEEEE
Confidence                               1346889999999888888886

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=99.69  E-value=9.7e-16  Score=167.90  Aligned_cols=242  Identities=17%  Similarity=0.278  Sum_probs=165.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++...++.                  ....+.+++..+|+++ |++.|
T Consensus        51 ~~~la~~A~~~al~~agl~~~~Id----~~i~~~~~~~~~------------------~~~~a~~l~~~lGl~~~~~~~v  108 (318)
T TIGR00747        51 SSTMGFEAAKRAIENAGISKDDID----LIIVATTTPDHA------------------FPSAACMVQAYLGIKGIPAFDL  108 (318)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CChHHHHHHHHhCCCCCcEeeh
Confidence            467899999999999999999988    788876543321                  1124578999999988 89999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.++.+||+|+|.+....                 .+. .....+++||||+|+||++.+
T Consensus       109 ~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------------~~~-~~~~~~~~GDGAaA~lL~~~~  170 (318)
T TIGR00747       109 SAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------------DWT-DRGTCVLFGDGAGAVVLGESE  170 (318)
T ss_pred             hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------CcC-CCCeEEEEecceeEEEEeecC
Confidence            99999999999999999999999999999999854321                 111 122356789999999998765


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCCC-CC---------CCC-------C-------HHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKTN-GI---------TAP-------N-------TKSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~~-~~---------~~p-------~-------~~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                      ...    .    |..+...+++... ..         ...       .       .....++++++|+++|++++||+|+
T Consensus       171 ~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~  242 (318)
T TIGR00747       171 DPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWF  242 (318)
T ss_pred             CCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            421    1    2222222222100 00         000       0       1234567899999999999999999


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL  496 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~  496 (829)
                      .+|..+...     ...+.+.++-   ..+.+. ... ..+||+.+|+=...|..++   +++.+.              
T Consensus       243 ~~h~~~~~~-----~~~~~~~lgi---~~~k~~-~~~-~~~Gn~~sas~~~~L~~~~---~~~~~~--------------  295 (318)
T TIGR00747       243 VPHQANLRI-----IEALAKRLEL---DMSQVV-KTV-HKYGNTSAASIPLALDELL---RTGRIK--------------  295 (318)
T ss_pred             EECCCCHHH-----HHHHHHHcCC---CHHHee-ehH-hhhCCHHHHHHHHHHHHHH---HcCCCC--------------
Confidence            999776543     2334444442   111222 122 3489999999777776643   333222              


Q ss_pred             CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                         +..++++-+||.|.+-.+++|+
T Consensus       296 -------------------~Gd~vll~~~G~G~t~~~~~l~  317 (318)
T TIGR00747       296 -------------------PGDLLLLVAFGGGLTWGAALVR  317 (318)
T ss_pred             -------------------CCCEEEEEEEehhheeeEEEEE
Confidence                               1246889999999998888886

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.66  E-value=5.1e-15  Score=162.69  Aligned_cols=247  Identities=17%  Similarity=0.259  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++...++.                  ....+.+++..+|++ .+.+.|
T Consensus        53 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~a~~l~~~lg~~~~~~~~v  110 (325)
T PRK12879         53 TSDLAIKAAERALARAGLDAEDID----LIIVATTTPDYL------------------FPSTASQVQARLGIPNAAAFDI  110 (325)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHhCCCCCcEEEE
Confidence            467899999999999999999988    777776543321                  123567899999997 488999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|.++|++|.++.+||+++|.+....                  .++.....+++||||+|+||++.+
T Consensus       111 ~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~~  172 (325)
T PRK12879        111 NAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT------------------DYTDRTTCILFGDGAGAVVLEATE  172 (325)
T ss_pred             CccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC------------------CccccCceEEEeecceEEEEEecC
Confidence            99999999999999999999999999999999753210                  111123457899999999999755


Q ss_pred             hhhhCCCceEEEEE-------------EeeeecCC---CCCCCCCCC--------HHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        361 DAKKDGDDIYCIIK-------------GWGVNQDG---KTNGITAPN--------TKSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       361 ~A~~~g~~i~a~I~-------------g~~~~~dg---~~~~~~~p~--------~~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                      ..    ..+.....             +.+...+.   .........        .....++++++|+++|++++|||++
T Consensus       173 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~  248 (325)
T PRK12879        173 NE----PGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWV  248 (325)
T ss_pred             CC----CCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            31    11211111             11100000   000000001        1224568899999999999999999


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL  496 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~  496 (829)
                      .+|-.+..     -..++.+.++-   ..+.+..  ....+||+.+|+-...|..+   ++.+.+.              
T Consensus       249 ~~h~~~~~-----~~~~~~~~lg~---~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~--------------  301 (325)
T PRK12879        249 IPHQANLR-----IIESLCEKLGI---PMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKIK--------------  301 (325)
T ss_pred             EECCCCHH-----HHHHHHHHcCC---CHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCCC--------------
Confidence            99955433     23455555542   1122222  34678999999877777654   3443221              


Q ss_pred             CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                         +..++++-+||.|-+-.++||+-
T Consensus       302 -------------------~Gd~vll~~~G~G~~~~~~l~~~  324 (325)
T PRK12879        302 -------------------PGDTLLLYGFGAGLTWAALLVKW  324 (325)
T ss_pred             -------------------CCCEEEEEEEchhhhhEEEEEEe
Confidence                               12468899999999988888873

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=99.65  E-value=1.9e-15  Score=165.81  Aligned_cols=214  Identities=19%  Similarity=0.288  Sum_probs=150.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC-CCcceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL-QGPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.+++..+|+ +.|++.|
T Consensus        50 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~~~~l~~~lg~~~~~~~~v  107 (320)
T cd00830          50 TSDLAVEAAKKALEDAGIDADDID----LIIVATSTPDYL------------------FPATACLVQARLGAKNAAAFDI  107 (320)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCcEeec
Confidence            578999999999999999999998    777776543321                  12346789999999 5688999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.++.+||+++|.+....                  .|+....++++||||+|+||++.+
T Consensus       108 ~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~~  169 (320)
T cd00830         108 NAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------DWTDRSTAVLFGDGAGAVVLEATE  169 (320)
T ss_pred             cccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEecC
Confidence            99999999999999999999999999999999854211                  133345678999999999999755


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCCC--------CCCCC--------------C-------HHHHHHHHHHHHHHcCCCCC
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKTN--------GITAP--------------N-------TKSQIRLQTKIYKKFNINPN  411 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~~--------~~~~p--------------~-------~~~~~~ai~~Al~~Agl~~~  411 (829)
                      .    +..+    .++...+++...        +...|              .       .....++++++|+++|++++
T Consensus       170 ~----~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~  241 (320)
T cd00830         170 E----DPGI----LDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPD  241 (320)
T ss_pred             C----CCcE----EEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHH
Confidence            3    2223    333333332110        00000              0       12346789999999999999


Q ss_pred             CccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHH
Q psy11396        412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII  473 (829)
Q Consensus       412 dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~  473 (829)
                      |||++.+|..+...     .+.+.+.++-   ..+.+  ...-..+||+.+|+-.+.|..++
T Consensus       242 di~~~~~h~~~~~~-----~~~~~~~lgl---~~~~~--~~~~~~~Gn~~sas~~~~L~~~~  293 (320)
T cd00830         242 DIDWFVPHQANLRI-----IEAVAKRLGL---PEEKV--VVNLDRYGNTSAASIPLALDEAI  293 (320)
T ss_pred             HCCEEEECCCCHHH-----HHHHHHHhCC---CHHHh--hhhHHhhCcHHHHHHHHHHHHHH
Confidence            99999999776544     2234444442   11122  22345689999999877777653

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.65  E-value=9.8e-15  Score=163.21  Aligned_cols=240  Identities=18%  Similarity=0.205  Sum_probs=155.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++|+    .+++++..++|.                 .+ ..+..|...+|+++ |++.|
T Consensus        63 ~~~La~~A~~~aL~~agi~~~dId----~li~~s~~~~~~-----------------~p-~~a~~v~~~Lgl~~~~~~~v  120 (378)
T PRK06816         63 NAQMAAEAIRDLLDDAGFSLGDIE----LLACGTSQPDQL-----------------MP-GHASMVHGELGAPPIEVVSS  120 (378)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEECCCCcC-----------------Ch-HHHHHHHhhCCCCCCceeee
Confidence            568999999999999999999998    788886554321                 11 22457888889865 88899


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHH-cCCCC--CCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK-SGMLS--PDGHCYSFDQRANGFVPGEGVGVLMLK  357 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~-~g~ls--~~~~~~pfd~~~~G~~~gEGaaalvL~  357 (829)
                      +.+|+|++.||..|.++|++|.++.+||+|+|.++.......+.. .+.+.  .+..+++|+.+..|+++||||+|+||+
T Consensus       121 ~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~  200 (378)
T PRK06816        121 AGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLE  200 (378)
T ss_pred             cCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEE
Confidence            999999999999999999999999999999999765543222221 11221  234568999999999999999999998


Q ss_pred             cchhhhhCCCc--eEEEEEEee-e------------ecCCCCCCCC--C-------------CCHHH--------HHHHH
Q psy11396        358 KLKDAKKDGDD--IYCIIKGWG-V------------NQDGKTNGIT--A-------------PNTKS--------QIRLQ  399 (829)
Q Consensus       358 ~~~~A~~~g~~--i~a~I~g~~-~------------~~dg~~~~~~--~-------------p~~~~--------~~~ai  399 (829)
                      +.+..  .|..  +.....+.. .            ..++......  .             .+...        ....+
T Consensus       201 ~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  278 (378)
T PRK06816        201 NKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPL  278 (378)
T ss_pred             ecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHH
Confidence            75432  2221  110000000 0            0000000000  0             01111        26678


Q ss_pred             HHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcc--cCCCCCccccCCcccCcCcchhhhhHHHHHHH
Q psy11396        400 TKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK--FSYHKNFCALGSVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       400 ~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~--~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~  472 (829)
                      +++|+++|++++|||++..|-......     +++.+.+..  .......++  ..-..+||+.+|+-...|..+
T Consensus       279 ~~~L~~~gl~~~DId~~v~Hq~n~~~~-----~~v~~~l~~~~~gl~~~k~~--~~~~~~GNt~sAsipi~L~~a  346 (378)
T PRK06816        279 LELVDKRNLDPDDIDYFLPHYSSEYFR-----EKIVELLAKAGFMIPEEKWF--TNLATVGNTGSASIYIMLDEL  346 (378)
T ss_pred             HHHHHHcCCChhhCCEEeeCcccHHHH-----HHHHHHHHhccCCCChhheE--EeccccccccchHHHHHHHHH
Confidence            889999999999999999996554332     233333310  011111222  222367999999977777655

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.64  E-value=4.6e-15  Score=163.99  Aligned_cols=260  Identities=13%  Similarity=0.141  Sum_probs=170.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      ...|+.+|+++||+++|+++++|+    .+++++..+++.                  ....+..++..+|++.  +.+.
T Consensus        61 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~~~------------------~p~~a~~v~~~lgl~~~~~~~~  118 (338)
T PRK09258         61 LSDGAIAAGRKALAEAGIDPSDIG----LLINTSVCRDYL------------------EPATACRVHHNLGLPKSCANFD  118 (338)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHcCCCCCCceee
Confidence            457999999999999999999998    777876543331                  1235678999999963  7899


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      |..+|+|++.||..|.++|++|.++.+||++.|.+..... ..+.  .+..+.....+|+.....+.+||||+|+||++.
T Consensus       119 v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~  195 (338)
T PRK09258        119 VSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE-ATID--RLLAPETTREDFAQSFATLTLGSGAAAAVLTRG  195 (338)
T ss_pred             hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc-chhh--hhccCccchhhhhhccceEEecccceEEEEecC
Confidence            9999999999999999999999999999999998543211 1111  111222222456666677889999999999975


Q ss_pred             hhhhhCCCceEEEEEEeeeecCCCCCCCC-------CCCH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396        360 KDAKKDGDDIYCIIKGWGVNQDGKTNGIT-------APNT--------KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-------~p~~--------~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~  424 (829)
                      +.. ..+.    .+.+....+++......       ..+.        ....++++++|+++|++++|||++.+|-.+.+
T Consensus       196 ~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~  270 (338)
T PRK09258        196 SLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAA  270 (338)
T ss_pred             CCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHH
Confidence            431 1122    23333332232211100       0111        23346888999999999999999999976655


Q ss_pred             CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeec
Q psy11396        425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFIN  504 (829)
Q Consensus       425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~  504 (829)
                      .     .+.+.+.++-   ..+.++. .. ..+||+.+|+=...|..++   +.|.+.                      
T Consensus       271 ~-----~~~~~~~lgl---~~~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~~----------------------  315 (338)
T PRK09258        271 H-----TRAILKALGI---DPEKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFLK----------------------  315 (338)
T ss_pred             H-----HHHHHHHhCC---CHHHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCCC----------------------
Confidence            4     2344444442   1122222 23 3689999998666666543   333221                      


Q ss_pred             cccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        505 TKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       505 ~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                 ...+++..+||.|-+...++++
T Consensus       316 -----------~Gd~vll~~~G~G~s~~~~~~~  337 (338)
T PRK09258        316 -----------PGDRVALLGIGSGLNCSMLEVK  337 (338)
T ss_pred             -----------CCCEEEEEEechhHhhHhHeee
Confidence                       1246888999988766655554

>KOG1389|consensus

Probab=99.63  E-value=9.8e-16  Score=155.08  Aligned_cols=237  Identities=20%  Similarity=0.268  Sum_probs=165.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh-hhccC--CCcceeec
Q psy11396        205 LFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS-YFLNL--QGPCLAID  281 (829)
Q Consensus       205 l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia-~~lgl--~Gp~~tv~  281 (829)
                      |...+.+..+|+-+++|..+...-+|.+++.+.+                       ....|++ ++-|+  +-|..+|+
T Consensus        64 Ll~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-----------------------a~e~R~a~~~ag~P~tvpv~tvN  120 (435)
T KOG1389|consen   64 LLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-----------------------ASECRMAAFYAGFPETVPVRTVN  120 (435)
T ss_pred             HHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-----------------------hHHHHHHHHHcCCCcccchhhhh
Confidence            4555678888999999988885545554443221                       2233443 33455  56899999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH--H--------HHHHHH-------cCCCC--------------
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD--I--------HIKMSK-------SGMLS--------------  330 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~--~--------~~~~~~-------~g~ls--------------  330 (829)
                      .-|+|||+|+..-+..|++|.+|.-|.+|+|+|++.+  .        ...+..       +|..+              
T Consensus       121 RqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eq  200 (435)
T KOG1389|consen  121 RQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQ  200 (435)
T ss_pred             hhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhh
Confidence            9999999999999999999999999999999987542  0        000000       01100              


Q ss_pred             ---------------------------------C-----------CCCCCC-------------CCCC-----CCCcccc
Q psy11396        331 ---------------------------------P-----------DGHCYS-------------FDQR-----ANGFVPG  348 (829)
Q Consensus       331 ---------------------------------~-----------~~~~~p-------------fd~~-----~~G~~~g  348 (829)
                                                       +           +...||             |-++     .+...++
T Consensus       201 D~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvS  280 (435)
T KOG1389|consen  201 DEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVS  280 (435)
T ss_pred             hHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcc
Confidence                                             0           111111             1111     1224579


Q ss_pred             cceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh
Q psy11396        349 EGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP  428 (829)
Q Consensus       349 EGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~  428 (829)
                      ||+++++|.+.+.|.+.|.+++++.+.+.............|     ..+|.++++.+|+..+|||++|.+         
T Consensus       281 DGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGP-----avAIp~alk~aGL~v~did~FEIN---------  346 (435)
T KOG1389|consen  281 DGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGP-----AVAIPKALKAAGLEVDDIDLFEIN---------  346 (435)
T ss_pred             cchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCc-----hhhhHHHHHHcCCcccccceeehh---------
Confidence            999999999999999999999999999877654433332223     668999999999999999999987         


Q ss_pred             HHHHHHHHHhcc--cCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396        429 IEFEALCESFNK--FSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       429 ~E~~Al~~~~~~--~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~  479 (829)
                       |+.|-+.++.-  .....+.+.+..-.-.+|||+||+|+..++..+.-|+++
T Consensus       347 -EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr  398 (435)
T KOG1389|consen  347 -EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR  398 (435)
T ss_pred             -HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence             77666655542  222333445555555689999999999999999999873

>cd07014 S49_SppA Signal peptide peptidase A

Probab=99.61  E-value=2.2e-16  Score=157.42  Aligned_cols=144  Identities=12%  Similarity=0.064  Sum_probs=114.5

Q ss_pred             ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhh
Q psy11396        588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA  667 (829)
Q Consensus       588 ~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~  667 (829)
                      -.+.+|.++++.+++|+++++|||++    ||.|+|+.......         ..+..+..++||+||+++|.|.|+|+.
T Consensus        22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~~~~---------~~i~~~~~~~kpVia~v~G~a~g~g~~   88 (177)
T cd07014          22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASEVIR---------AELAAARAAGKPVVASGGGNAASGGYW   88 (177)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHHHHH---------HHHHHHHhCCCCEEEEECCchhHHHHH
Confidence            34778999999999999999999985    78899876543211         122233348999999999999999999


Q ss_pred             hhhccccccccccceeccccccccccCCCccee--------ccccccC--HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL--------IFPQRFG--KILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       668 lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~--------~l~r~iG--~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      |+++||+++++++++|+++.+..+..+......        .+++..|  ....++++..|..++++||++.||||++.+
T Consensus        89 la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~GLVD~v~~  168 (177)
T cd07014          89 ISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANGLVDSLGS  168 (177)
T ss_pred             HHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcCCcccCCC
Confidence            999999999999999999988776433222222        3444445  888999999999999999999999999999


Q ss_pred             hhhHHHH
Q psy11396        738 RKQVLFY  744 (829)
Q Consensus       738 ~~~l~~~  744 (829)
                      .+++.++
T Consensus       169 ~~e~~~~  175 (177)
T cd07014         169 FDDAVAK  175 (177)
T ss_pred             HHHHHHH
Confidence            8877653

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p

>KOG1391|consensus

Probab=99.61  E-value=1.2e-14  Score=143.58  Aligned_cols=244  Identities=17%  Similarity=0.262  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ++.|...|++.||..+++.++.++...+|.++.++....                     .++.++....|+  .-|..+
T Consensus        28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI---------------------Yl~RHvGL~~GvP~e~pALt   86 (396)
T KOG1391|consen   28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI---------------------YLARHVGLRVGVPKETPALT   86 (396)
T ss_pred             hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce---------------------EeeeccccccCCcCccCcee
Confidence            456788899999999999999999666666666554221                     122334444443  348999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH---------------------H----------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI---------------------K----------------  322 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~---------------------~----------------  322 (829)
                      |+.-|.||.+++..+++.|.-|+++++|+||+|.|+..+...                     .                
T Consensus        87 iNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEn  166 (396)
T KOG1391|consen   87 INRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAEN  166 (396)
T ss_pred             ehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHHH
Confidence            999999999999999999999999999999999876421100                     0                


Q ss_pred             -----------------HH--------HcCCCC------------------CCCCCCC-------------CCCC-----
Q psy11396        323 -----------------MS--------KSGMLS------------------PDGHCYS-------------FDQR-----  341 (829)
Q Consensus       323 -----------------~~--------~~g~ls------------------~~~~~~p-------------fd~~-----  341 (829)
                                       .+        ..|...                  -+.+.||             |..+     
T Consensus       167 L~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFkKdG~VtA  246 (396)
T KOG1391|consen  167 LAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFKKDGTVTA  246 (396)
T ss_pred             hhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhccCCeeec
Confidence                             00        000000                  0112222             1111     


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      .+...++|||+++++.+++..++.+.+|+|+|.++....-....+...|     .-+|+.+|+.+|++..|||.||.+-.
T Consensus       247 GnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGP-----vPAI~~vLKksGlkl~DiDl~EvNEA  321 (396)
T KOG1391|consen  247 GNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGP-----VPAISGVLKKSGLKLKDIDLVEVNEA  321 (396)
T ss_pred             cccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccC-----cHHHHHHHHHcCCcccccceEEechh
Confidence            1223478999999999999999999999999999987654333333333     34899999999999999999999833


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      ..+     ...|..+.++   .....+.|+.-.-.+|||+||||...-...++.|+++
T Consensus       322 FAp-----Q~LAv~r~L~---ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr  371 (396)
T KOG1391|consen  322 FAP-----QYLAVERSLD---LDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR  371 (396)
T ss_pred             hch-----HHHHHHHhhC---CChhhccccCceeeccCccccCcchhhHHHHHHHHHc
Confidence            322     1223333332   2234456666666789999999999999999998774

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=99.59  E-value=1e-13  Score=152.38  Aligned_cols=240  Identities=16%  Similarity=0.251  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++|+..+++.                  . ..+..++..+|+++ |++.|
T Consensus        51 ~~~la~~A~~~aL~~ag~~~~dId----~vi~~s~~~~~~------------------~-~~~~~v~~~Lg~~~~~~~~v  107 (326)
T CHL00203         51 LTKLAAEAANKALDKAHMDPLEID----LIILATSTPDDL------------------F-GSASQLQAEIGATRAVAFDI  107 (326)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------C-chHHHHHHHhCCCCCceeee
Confidence            467999999999999999999998    788876443221                  0 12346788888865 77899


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      ..+|+|++.||..|.++|++|.++.+||+|+|.+....                  +++.....+++||||+|+||++.+
T Consensus       108 ~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~~fgDga~A~ll~~~~  169 (326)
T CHL00203        108 TAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI------------------DWSDRKTCILFGDGAGAAIIGASY  169 (326)
T ss_pred             cccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC------------------CcccCCceEEEcceeeEEEEEEcC
Confidence            99999999999999999999999999999999853211                  112223567899999999998743


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCC----------------CCCCCCC---------H--------HHHHHHHHHHHHHcC
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKT----------------NGITAPN---------T--------KSQIRLQTKIYKKFN  407 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~----------------~~~~~p~---------~--------~~~~~ai~~Al~~Ag  407 (829)
                      .     ..+.    ++...+++..                .....|.         +        ....++++++|+++|
T Consensus       170 ~-----~~~~----~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g  240 (326)
T CHL00203        170 E-----NSIL----GFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALN  240 (326)
T ss_pred             C-----CCeE----EEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            2     1121    2111111110                0000010         0        124457899999999


Q ss_pred             CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCC
Q psy11396        408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY  487 (829)
Q Consensus       408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~  487 (829)
                      ++++|||++-+|-.+...     .+++.+.++-   ..+.++  ..-..+||+.+|+=...|..+   ++.|.+.     
T Consensus       241 ~~~~did~~~~hq~~~~~-----~~~~~~~lgl---~~~k~~--~~l~~~Gn~~sasi~~~L~~~---~~~g~~~-----  302 (326)
T CHL00203        241 ISIDEVDWFILHQANKRI-----LEAIANRLSV---PNSKMI--TNLEKYGNTSAASIPLALDEA---IQNNKIQ-----  302 (326)
T ss_pred             CCHHHCCEEEECCCCHHH-----HHHHHHHhCC---CHHHhh--hHHHhhCcHHHHHHHHHHHHH---HHhCCCC-----
Confidence            999999999999555432     3445555542   112222  223467999998866666554   3444332     


Q ss_pred             CCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        488 NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       488 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                                  +..++++-+||.|=+-.++|++
T Consensus       303 ----------------------------~Gd~vll~~~G~G~s~~~~v~~  324 (326)
T CHL00203        303 ----------------------------PGQIIVLSGFGAGLTWGAIVLK  324 (326)
T ss_pred             ----------------------------CCCEEEEEEEchhhhheEEEEE
Confidence                                        1246888999998887888876

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=99.57  E-value=1.8e-13  Score=153.08  Aligned_cols=242  Identities=17%  Similarity=0.260  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    -+++++..+++.                  . ..+..+...+|+++ |++.|
T Consensus        96 ~~~La~~Aa~~aL~~agi~~~dId----~li~~s~~~~~~------------------~-~~a~~v~~~LG~~~~~~~dv  152 (379)
T PLN02326         96 LTSLAVEAAKKALEMAGVDPEDVD----LVLLCTSSPDDL------------------F-GSAPQVQAALGCTNALAFDL  152 (379)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcc------------------C-cHHHHHHHHhCCCCCceeec
Confidence            467999999999999999999987    677775533221                  0 13557888899865 77889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|.++|++|.++.+||+|.|.+....                  .|+...+.+++||||+|+||++.+
T Consensus       153 ~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~------------------~~~d~~~~~lfGDGAaAvlL~~~~  214 (379)
T PLN02326        153 TAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV------------------DWTDRGTCILFGDGAGAVVLQACD  214 (379)
T ss_pred             cccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC------------------CccccCceEEEcceeEEEEEEEcC
Confidence            99999999999999999999999999999999753111                  122234556899999999999754


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCC-----------------------CCC---------CCCCH--------HHHHHHHH
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKT-----------------------NGI---------TAPNT--------KSQIRLQT  400 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~-----------------------~~~---------~~p~~--------~~~~~ai~  400 (829)
                      ...   ..++    ++...+++..                       ...         ....+        ....++++
T Consensus       215 ~~~---~~i~----~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~  287 (379)
T PLN02326        215 DDE---DGLL----GFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIE  287 (379)
T ss_pred             CCC---CceE----EEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHH
Confidence            321   1111    1111111100                       000         00011        12346788


Q ss_pred             HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396        401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV  480 (829)
Q Consensus       401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~  480 (829)
                      ++|+++|++++|||++-.|-.+...     .+.+.+.++-   ..+.++ ... ..+||+.+|+=.+.|..++   +.+.
T Consensus       288 ~~L~~~gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl---~~ek~~-~~l-~~~GNt~sAsi~~~L~~~~---~~g~  354 (379)
T PLN02326        288 SALQKAGLTAESIDWLLLHQANQRI-----IDAVAQRLGI---PPEKVI-SNL-ANYGNTSAASIPLALDEAV---RSGK  354 (379)
T ss_pred             HHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCC---CHHHee-ecH-hhcCcHHHHHHHHHHHHHH---HcCC
Confidence            9999999999999999999554432     2334555542   122232 223 4789999998666665543   3322


Q ss_pred             CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                      +                                 ++..+++..+||.|-+-.+++|+
T Consensus       355 ~---------------------------------~~Gd~vll~~~G~G~t~~~~ll~  378 (379)
T PLN02326        355 V---------------------------------KKGDVIATAGFGAGLTWGSAIVR  378 (379)
T ss_pred             C---------------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence            1                                 12356889999998888888875

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=99.53  E-value=4.7e-13  Score=147.79  Aligned_cols=239  Identities=15%  Similarity=0.219  Sum_probs=158.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ...|+++|+++||++||+++++|+    ++++++..+++.                  ....+..+...+|++  -+++.
T Consensus        50 ~~~la~~Aa~~aL~~agl~~~dID----~li~~s~~~~~~------------------~p~~a~~v~~~LGl~~~~~~~d  107 (345)
T TIGR00748        50 TATIGVEAARNALKRAKIDPKDIG----AVYVGSESHPYA------------------VKPTATIVAEAIGATPDLTAAD  107 (345)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCcc------------------ccchHHHHHHHcCCCCCceEEE
Confidence            467999999999999999999998    788876544331                  112356788899985  37888


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      |..+|++++.||..|.++|++|.++.+||.+.|.+..             .+.        +..-+..||||+|+||++.
T Consensus       108 v~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------~~~--------~~~~~~~GDGAaA~vl~~~  166 (345)
T TIGR00748       108 LEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------APG--------DALEYTAGAGGAAYIIGEK  166 (345)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------CCC--------ccCcccCCCceEEEEEccC
Confidence            9999999999999999999999999999999997531             011        1112556999999999864


Q ss_pred             hhhhhCCCceEEEEEEee-eecCCCC---C-CCCCC-----------CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396        360 KDAKKDGDDIYCIIKGWG-VNQDGKT---N-GITAP-----------NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT  423 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~-~~~dg~~---~-~~~~p-----------~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt  423 (829)
                      +..        +.+.+.. ...++..   . +...|           -.....++++++|+++|++++|||++-+|-.+.
T Consensus       167 ~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~  238 (345)
T TIGR00748       167 NTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG  238 (345)
T ss_pred             Ccc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh
Confidence            311        1222211 1111100   0 00001           012234788899999999999999999994443


Q ss_pred             CCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396        424 KLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI  503 (829)
Q Consensus       424 ~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v  503 (829)
                      .     -.+.+.+.++-   ....++.+-.-..+||+.+|+=.+.|..++..     +.                     
T Consensus       239 ~-----~~~~~~~~lgl---~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~-----~~---------------------  284 (345)
T TIGR00748       239 K-----FYLVAARMLGF---PKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI-----AE---------------------  284 (345)
T ss_pred             H-----HHHHHHHHcCC---CHHHeeccccccccCchhhhHHHHHHHHHHHh-----cC---------------------
Confidence            2     22234444442   11222222112568999999977777665321     10                     


Q ss_pred             ccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                  +..+++..+||-|-+.++++++
T Consensus       285 ------------~Gd~vll~~~G~G~s~~~~~~~  306 (345)
T TIGR00748       285 ------------PGDRILAVSYGSGAGSDAFSIV  306 (345)
T ss_pred             ------------CCCEEEEEEecCCcceeEEEEE
Confidence                        1236899999999888888886

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=99.53  E-value=1.6e-13  Score=150.75  Aligned_cols=215  Identities=15%  Similarity=0.186  Sum_probs=145.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC-CCcceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL-QGPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++....+.                  ....+.+++..+|+ ..|+++|
T Consensus        48 ~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~~~~i~~~lg~~~~~~~~v  105 (324)
T cd00827          48 VPTMAVEAARRALERAGIDPDDIG----LLIVATESPIDK------------------GKSAATYLAELLGLTNAEAFDL  105 (324)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CccHHHHHHHHcCCCCCceeeh
Confidence            467999999999999999999998    788876543221                  22356778999999 4689999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.++.+||+|+|.+.....                   .....++++||||+|+||++.+
T Consensus       106 ~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-------------------~~~~~~~~~gdgaaA~ll~~~~  166 (324)
T cd00827         106 KQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD-------------------EGSALEPTLGDGAAAMLVSRNP  166 (324)
T ss_pred             hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-------------------CCCCccccccCceEEEEEecCc
Confidence            999999999999999999999999999999998643321                   2345789999999999999865


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCC---------CCC-------------CC--------CCHHHHHHHHHHHHHHcCCCC
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKT---------NGI-------------TA--------PNTKSQIRLQTKIYKKFNINP  410 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~---------~~~-------------~~--------p~~~~~~~ai~~Al~~Agl~~  410 (829)
                      ...  +..+.    ++...+++..         ...             ..        ........+++++|++++++ 
T Consensus       167 ~~~--~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-  239 (324)
T cd00827         167 GIL--AAGIV----STHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-  239 (324)
T ss_pred             ccc--cCCce----eeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-
Confidence            421  11222    2111111110         000             00        00234577888999999999 


Q ss_pred             CCccEEEecCCCC-CCCChHHHHHHHHHhcccCCCCCccccC--CcccCcCcchhhhhHHHHHHH
Q psy11396        411 NDIQLLEAHGTGT-KLGDPIEFEALCESFNKFSYHKNFCALG--SVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       411 ~dId~ve~hgtgt-~~gD~~E~~Al~~~~~~~~~~~~~~~v~--s~k~~~GH~~gAsG~~~li~~  472 (829)
                      +||+++..|-.+. ..     ...+.+.++-   ....+...  ..-..+||+.+|+-...+..+
T Consensus       240 ~~i~~~~~h~~~~~~~-----~~~~~~~l~~---~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~  296 (324)
T cd00827         240 EDIDYFVPHQPNGKKI-----LEAVAKKLGG---PPEKASQTRWILLRRVGNMYAASILLGLASL  296 (324)
T ss_pred             cccceeeccCchHHHH-----HHHHHHHccc---hHhhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence            9999999995554 22     1222222221   01111111  234567999999866666655

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK06840 hypothetical protein; Validated

Probab=99.53  E-value=3.8e-13  Score=148.74  Aligned_cols=243  Identities=19%  Similarity=0.198  Sum_probs=158.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEc-cccccccccccCccccchhhhccccccchhhHhhhhccCCC-ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG-CAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t  279 (829)
                      ...|+.+|+++||+++|+++++++    .+++. +...++.                  ....+.+++..+|++. +++.
T Consensus        53 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~~------------------~p~~a~~l~~~lGl~~~~~~~  110 (339)
T PRK06840         53 TSDMAIAAAKPALKQAGVDPAAID----VVIYIGSEHKDYP------------------VWSSAPKIQHEIGAKNAWAFD  110 (339)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCCCC------------------CCchHHHHHHHhCCCCccccc
Confidence            567999999999999999999987    66543 3222221                  1123577899999965 7888


Q ss_pred             eccchhhHHHHHHHHHHHHHc-CCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCC--cccccceEEEEE
Q psy11396        280 IDTACSSSLVAIAHACDSLIL-GNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANG--FVPGEGVGVLML  356 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~-G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G--~~~gEGaaalvL  356 (829)
                      |..+|++++.||..|+++|++ |.++.+||.+.|......                  .|+....+  +.+||||+|+||
T Consensus       111 v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~------------------~~~~~~~~~~~~~GDgAaA~ll  172 (339)
T PRK06840        111 IMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLV------------------DYDNPRTRFMFNFAAGGSAALL  172 (339)
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccccc------------------CcCCCCeeeeccCCCceeEEEE
Confidence            999999999999999999999 999999999988632110                  01111223  236999999999


Q ss_pred             ccchhhhhCCCceEEEEEEeeeecCCCCC--------CC------------------CCCC----------HHHHHHHHH
Q psy11396        357 KKLKDAKKDGDDIYCIIKGWGVNQDGKTN--------GI------------------TAPN----------TKSQIRLQT  400 (829)
Q Consensus       357 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~~--------~~------------------~~p~----------~~~~~~ai~  400 (829)
                      ++.+.    +..+    .+....+++...        +.                  ..+.          .....++++
T Consensus       173 ~~~~~----~~~i----l~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  244 (339)
T PRK06840        173 KKDAG----KNRI----LGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIR  244 (339)
T ss_pred             EecCC----CCce----EEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHH
Confidence            87432    2222    222222221100        00                  0010          012457899


Q ss_pred             HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396        401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV  480 (829)
Q Consensus       401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~  480 (829)
                      ++|+++|++++|||++-.|-.+...     .+.+.+.++-   ......   ....+||+.+|+=.+.|..++   +.+.
T Consensus       245 ~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl---~~~~~~---~~~~~Gn~~sas~~~~L~~~~---~~~~  310 (339)
T PRK06840        245 EALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGL---TEEQAI---YLDEYGHLGQLDQILSLHLAL---EQGK  310 (339)
T ss_pred             HHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCC---CHHHeE---eHHhccchhhhhHHHHHHHHH---HcCC
Confidence            9999999999999999887443222     2344554442   111222   245789999988666665442   3322


Q ss_pred             CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      +.                                 ...+.+..+||.|.+-.+++|+-.
T Consensus       311 ~~---------------------------------~Gd~ill~~~G~G~s~~~~~l~~~  336 (339)
T PRK06840        311 LK---------------------------------DGDLVVLVSAGTGYTWAATVIRWG  336 (339)
T ss_pred             CC---------------------------------CCCEEEEEEEehhhheeEEEEEec
Confidence            21                                 124689999999999999999853

>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=99.53  E-value=6.6e-15  Score=147.80  Aligned_cols=140  Identities=13%  Similarity=0.059  Sum_probs=105.7

Q ss_pred             ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEec---ccccch
Q psy11396        588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQ---GHAIGA  664 (829)
Q Consensus       588 ~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~---G~a~Gg  664 (829)
                      .+...+...+..+++++ ++.|+|.    .=|.|+++......            +..+..+|||||++|+   |+|.|+
T Consensus        13 ~~~~~l~~~l~~a~~~~-~~~vvl~----InSpGG~v~~~~~i------------~~~l~~~~kPvia~v~~~~G~Aasg   75 (187)
T cd07020          13 ATADYLERAIDQAEEGG-ADALIIE----LDTPGGLLDSTREI------------VQAILASPVPVVVYVYPSGARAASA   75 (187)
T ss_pred             HHHHHHHHHHHHHHhCC-CCEEEEE----EECCCCCHHHHHHH------------HHHHHhCCCCEEEEEecCCCCchhH
Confidence            33455667777777554 6766664    22445665443321            1223458999999999   999999


Q ss_pred             hhhhhhccccccccccceeccccccccccCCC--------------cceeccccccCH--HHHHHHHhcCCccCHHHHHH
Q psy11396        665 GWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA--------------GSTLIFPQRFGK--ILSREILFTASEFKGKELKE  728 (829)
Q Consensus       665 G~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~--------------g~~~~l~r~iG~--~~a~e~ll~g~~~~a~eA~~  728 (829)
                      |+.++++||+++++++++|++++...+..+..              .....++++.|.  .++++++++|+.|+++||++
T Consensus        76 G~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~a~~~l~~g~~~~a~eA~~  155 (187)
T cd07020          76 GTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAEWAEKAVRESLSLTAEEALK  155 (187)
T ss_pred             HHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCeecHHHHHH
Confidence            99999999999999999999999885544322              124467888887  79999999999999999999


Q ss_pred             cCCcccccChh-hHHHH
Q psy11396        729 RGISMPVLPRK-QVLFY  744 (829)
Q Consensus       729 ~GLv~~v~~~~-~l~~~  744 (829)
                      +||||++++++ ++...
T Consensus       156 ~Glvd~v~~~~~~~~~~  172 (187)
T cd07020         156 LGVIDLIAADLNELLKK  172 (187)
T ss_pred             cCCcccccCCHHHHHHH
Confidence            99999999876 56543

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c

>PRK04262 hypothetical protein; Provisional

Probab=99.53  E-value=3e-13  Score=149.74  Aligned_cols=239  Identities=18%  Similarity=0.228  Sum_probs=156.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      ...|+.+|+++||++||+++++++    .+++++..++|.                 .+ ..+.++...+|++.  +++.
T Consensus        51 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~~~-----------------~p-~~a~~v~~~Lgl~~~~~~~d  108 (347)
T PRK04262         51 TATIAVEAARNALKRAGIDPKEIG----AVYVGSESHPYA-----------------VK-PTATIVAEALGATPDLTAAD  108 (347)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCcc-----------------cc-cHHHHHHHHcCCCCCceEEE
Confidence            457999999999999999999998    777776543331                 11 23457888899964  6788


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      ++.+|++++.||..|.++|++|.++.+||.+.|....             .+..        ..-+..||||+|+||++.
T Consensus       109 v~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~~~~--------~~~~~~GDGA~A~ll~~~  167 (347)
T PRK04262        109 LEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------APGD--------ALEYTAAAGGAAFIIGKE  167 (347)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------CCCC--------CCCCcCCCCcEEEEEecC
Confidence            9999999999999999999999999999999997210             0110        111335999999999863


Q ss_pred             hhhhhCCCceEEEEEEee-eecCCCCC----CC--------CC--C-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396        360 KDAKKDGDDIYCIIKGWG-VNQDGKTN----GI--------TA--P-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT  423 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~-~~~dg~~~----~~--------~~--p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt  423 (829)
                      +.        ..+|.+.. ...++...    +.        ..  + ......++++++|+++|++++|||++-+|-.+.
T Consensus       168 ~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~  239 (347)
T PRK04262        168 EV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNG  239 (347)
T ss_pred             cc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCch
Confidence            21        12233321 11111100    00        00  0 013456789999999999999999999994444


Q ss_pred             CCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396        424 KLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI  503 (829)
Q Consensus       424 ~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v  503 (829)
                      ..     .+.+.+.++-   ....+..+-+-..+||+.+|+=...|..++.   .  +.                     
T Consensus       240 ~~-----~~~~~~~Lgl---~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~---~--~~---------------------  285 (347)
T PRK04262        240 KF-----PLRVAKMLGF---TKEQVKPGLLTPYIGNTYSGSALLGLAAVLD---V--AK---------------------  285 (347)
T ss_pred             HH-----HHHHHHHcCC---CHHHhhccchhhhhCChHHHHHHHHHHHHHH---h--CC---------------------
Confidence            33     2233333431   1222332222356899999997776665431   1  10                     


Q ss_pred             ccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                  +..+++..+||.|-+...++++
T Consensus       286 ------------~Gd~vll~~~G~G~~~~~~~~~  307 (347)
T PRK04262        286 ------------PGDRILVVSFGSGAGSDAFSIT  307 (347)
T ss_pred             ------------CCCEEEEEecCCCcceeeEEEE
Confidence                        1236899999998877777775

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.47  E-value=2.8e-12  Score=140.96  Aligned_cols=242  Identities=16%  Similarity=0.192  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++|+    -+++++..++|.                  ....+.+|+..||+.. +++.|
T Consensus        52 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~t~~~d~~------------------~p~~a~~v~~~Lg~~~~~~~di  109 (326)
T PRK05963         52 LSDLAASAGDMALSDAGIERSDIA----LTLLATSTPDHL------------------LPPSAPLLAHRLGLQNSGAIDL  109 (326)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CCcHHHHHHHHhCCCCCceeec
Confidence            467999999999999999999998    788887655442                  1234568999999954 78889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      ..+|++++.||..|..+|++|. +.+||.++|.+..           .+.+       +....++++||||+|+||++.+
T Consensus       110 ~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~-----------~~~~-------~~~~~~~lfGDgA~A~ll~~~~  170 (326)
T PRK05963        110 AGACAGFLYALVLADGFVRAQG-KPVLVVAANILSR-----------RINM-------AERASAVLFADAAGAVVLAPSA  170 (326)
T ss_pred             cchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhc-----------cCCc-------cccCceEEEeecceEEEEEecC
Confidence            9999999999999999999985 8899999987421           1111       1123567899999999998644


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCC-------------C----------CCCCCC--------HHHHHHHHHHHHHHcCCC
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKT-------------N----------GITAPN--------TKSQIRLQTKIYKKFNIN  409 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~-------------~----------~~~~p~--------~~~~~~ai~~Al~~Agl~  409 (829)
                      ..   ...+.    +....+++..             .          .+...+        .....++++++|+++|++
T Consensus       171 ~~---~~~~l----~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~  243 (326)
T PRK05963        171 KA---NSGVL----GSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMT  243 (326)
T ss_pred             CC---CCceE----EEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            21   11111    1111111110             0          000001        123456888999999999


Q ss_pred             CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCC
Q psy11396        410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI  489 (829)
Q Consensus       410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~  489 (829)
                      ++|||++-+|-.+..     -.+.+.+.++-   ....+ + ..-..+||+.+|+=.+.|..+   ++.+.+        
T Consensus       244 ~~did~~~~h~~~~~-----~~~~~~~~l~l---~~~k~-~-~~l~~~Gn~~sas~~~~L~~~---~~~~~~--------  302 (326)
T PRK05963        244 PQDIDRFFPHQANAR-----IVDKVCETIGI---PRAKA-A-STLETYGNSSAATIPLSLSLA---NLEQPL--------  302 (326)
T ss_pred             HHHCCEEEeCCCCHH-----HHHHHHHHcCC---CHHHh-h-hhHHhhCcHHHHHHHHHHHHH---HHhCCC--------
Confidence            999999999944432     23334444431   11111 1 222467999777755544332   223211        


Q ss_pred             CCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       490 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                               .+..++++.+||.|-+-.++||+
T Consensus       303 -------------------------~~Gd~vll~~~G~G~~~~~~ll~  325 (326)
T PRK05963        303 -------------------------REGERLLFAAAGAGMTGGAVVMR  325 (326)
T ss_pred             -------------------------CCCCEEEEEEEehhhhheeeEEe
Confidence                                     12356899999999888888876

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=99.46  E-value=1.3e-13  Score=153.91  Aligned_cols=97  Identities=26%  Similarity=0.490  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHcCCC--CCCCCCC-ceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        205 LFLQNCWTCIEDAGYN--PFSLSGS-LCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       205 l~l~aa~~AL~dAGl~--~~~i~~~-~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      +..++...++.|+++.  +.+++.. --.+++|+....                 +.....++..++...|+.+  |.++
T Consensus        25 l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~-----------------g~~~~~~ar~~a~~aGl~~~~p~~~   87 (392)
T COG0183          25 LAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQA-----------------GEQGQNIARQAALAAGLPGSVPAVT   87 (392)
T ss_pred             cCHHHHHHHHHHHHhhhccccCCHHHhhhheecccccc-----------------ccccccHHHHHHHHcCCCCCCCceE
Confidence            3344556667777663  2244432 224566533211                 1123456677888999975  9999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD  318 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~  318 (829)
                      |+.+|+||+.|+..|++.|++|.+|++|+||+|+|+...
T Consensus        88 V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~  126 (392)
T COG0183          88 VNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP  126 (392)
T ss_pred             EeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCC
Confidence            999999999999999999999999999999999987654

>KOG1392|consensus

Probab=99.43  E-value=1.3e-13  Score=138.21  Aligned_cols=274  Identities=19%  Similarity=0.244  Sum_probs=181.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceeec
Q psy11396        204 RLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAID  281 (829)
Q Consensus       204 ~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv~  281 (829)
                      .|+.++....|+.-.++.+.++    -+++|+-...                  .-.+.++...+..-|+  +-|..||.
T Consensus        68 dlar~al~~ll~kt~lpke~~d----yii~gtviqe------------------vktsniareaal~agfsdktpahtvt  125 (465)
T KOG1392|consen   68 DLAREALKALLEKTKLPKEQLD----YIICGTVIQE------------------VKTSNIAREAALLAGFSDKTPAHTVT  125 (465)
T ss_pred             HHHHHHHHHHHHhccCCHHHhc----eeeehhhHHH------------------HhcchHHHHHHHhcCCCCCCccceee
Confidence            4566777788888888888887    5666643211                  1123455555555566  56999999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHH------------------------cCCCCCC-----
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK------------------------SGMLSPD-----  332 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~------------------------~g~ls~~-----  332 (829)
                      .+|-|+.+|+..++.+|..|.||++++||+|.+++.+.......                        ...++|+     
T Consensus       126 macissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nflapelpava  205 (465)
T KOG1392|consen  126 MACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLAPELPAVA  205 (465)
T ss_pred             eehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccCcCcchhe
Confidence            99999999999999999999999999999998876433211000                        0011100     


Q ss_pred             -------------------------------------------C---CCCCCCC--------------------------
Q psy11396        333 -------------------------------------------G---HCYSFDQ--------------------------  340 (829)
Q Consensus       333 -------------------------------------------~---~~~pfd~--------------------------  340 (829)
                                                                 +   ...||--                          
T Consensus       206 efstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvssle~laklkp  285 (465)
T KOG1392|consen  206 EFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVSSLEKLAKLKP  285 (465)
T ss_pred             eccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccCCHHHHhhcCc
Confidence                                                       0   0001110                          


Q ss_pred             ----------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeee-ecCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy11396        341 ----------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV-NQDGKTNGITAPNTKSQIRLQTKIYKKFNIN  409 (829)
Q Consensus       341 ----------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~  409 (829)
                                .++...+.|||.+.++..+|.|.+.|.++-|.++.+-. ++|+...-+..|     ..++.+.|++||++
T Consensus       286 afvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~ipkll~kaglt  360 (465)
T KOG1392|consen  286 AFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVIPKLLDKAGLT  360 (465)
T ss_pred             hhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----ccccHHHHHHcCCc
Confidence                      12224468999999999999999999999999999864 566655444444     45889999999999


Q ss_pred             CCCccEEEecCCCCCCCChHHHHHH-HHHhc----ccCCCCCcccc-----CCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396        410 PNDIQLLEAHGTGTKLGDPIEFEAL-CESFN----KFSYHKNFCAL-----GSVKSNIGHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       410 ~~dId~ve~hgtgt~~gD~~E~~Al-~~~~~----~~~~~~~~~~v-----~s~k~~~GH~~gAsG~~~li~~~l~L~~~  479 (829)
                      ..|||.+|.|-...-. =.....|+ ...|.    +....-+.+|+     ....-.||||+||+|+.-...+...|++ 
T Consensus       361 lkdid~feiheafagq-ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~-  438 (465)
T KOG1392|consen  361 LKDIDVFEIHEAFAGQ-ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE-  438 (465)
T ss_pred             ccccchhhhHHHHhHH-HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh-
Confidence            9999999999332110 00001111 01121    10101111222     2222347999999999988877766644 


Q ss_pred             CCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        480 VLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       480 ~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                                                         .+.++++|-+..-||+...+++|.||.
T Consensus       439 -----------------------------------e~gqygvvaacaaggqgvamlieaypk  465 (465)
T KOG1392|consen  439 -----------------------------------EKGQYGVVAACAAGGQGVAMLIEAYPK  465 (465)
T ss_pred             -----------------------------------hcCceeEeehhhcCCcceEEEeeccCC
Confidence                                               235688999999999999999999873

>PLN03172 chalcone synthase family protein; Provisional

Probab=99.39  E-value=4.4e-11  Score=133.50  Aligned_cols=275  Identities=13%  Similarity=0.099  Sum_probs=169.0

Q ss_pred             CCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhh
Q psy11396        190 NISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSY  269 (829)
Q Consensus       190 ~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~  269 (829)
                      ++..+......-...|+.+|+++||+++|+++++|+    .+++.+..+..                   ....+.+|..
T Consensus        90 ~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId----~ii~~t~t~~~-------------------~P~~a~~l~~  146 (393)
T PLN03172         90 SLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD-------------------MPGADYQLTK  146 (393)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc-------------------CchHHHHHHH
Confidence            455555556666778999999999999999999987    67666654210                   1236788999


Q ss_pred             hccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcc
Q psy11396        270 FLNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFV  346 (829)
Q Consensus       270 ~lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~  346 (829)
                      .||++.-   .+.+..+|++++.+|..|.+++++|....+||.++|.++....          .++.  +..+.--....
T Consensus       147 ~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------~~~d--~~~~~~v~~~L  214 (393)
T PLN03172        147 LLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFR----------GPSD--THLDSLVGQAL  214 (393)
T ss_pred             HhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhc----------cccc--ccHHhhhccch
Confidence            9999763   3567999999999999999999999999999999998641110          0000  00000013477


Q ss_pred             cccceEEEEEccchhhhhCCCceEEEEEEeee----ecCCCCC------C------CCCC--CHHHHHHHHHHHHHHcCC
Q psy11396        347 PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV----NQDGKTN------G------ITAP--NTKSQIRLQTKIYKKFNI  408 (829)
Q Consensus       347 ~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~----~~dg~~~------~------~~~p--~~~~~~~ai~~Al~~Agl  408 (829)
                      +||||+|+||+..+... .. ++.-+|.++..    .+++...      +      ...|  -...+...+++.|++.|+
T Consensus       215 FGDGAaAvVl~~~~~~~-~~-~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl  292 (393)
T PLN03172        215 FGDGAAAVIIGADPDTK-IE-RPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGI  292 (393)
T ss_pred             hcCceEEEEEecCCCCc-cc-CceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCC
Confidence            89999999998743321 01 12123444321    1221100      0      0011  123345677788899999


Q ss_pred             CCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHH-HhcCCCCCCCC
Q psy11396        409 NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILS-LKHKVLPPTIN  486 (829)
Q Consensus       409 ~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~-L~~~~ipp~~~  486 (829)
                      ++.||+++-+|=-|     ..=.+++.+.++-.   .+.+..+ .+-...|++-+|+=..-|-+.... ++.+.+.    
T Consensus       293 ~~~di~~~~~Hqgg-----~~Il~~v~~~Lgl~---~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~----  360 (393)
T PLN03172        293 NDWNSIFWIAHPGG-----PAILDQVEIKLDLK---EEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGS----  360 (393)
T ss_pred             CccccceEEecCCc-----HHHHHHHHHHcCCC---HHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCC----
Confidence            99999999999443     33455566665521   1111110 123346888888744444432210 1111110    


Q ss_pred             CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                                                +.....+++..+||.|=+-..++|+..
T Consensus       361 --------------------------~G~~~~~~ll~afGpG~t~~~~ll~~~  387 (393)
T PLN03172        361 --------------------------TGEGLEWGVLFGFGPGLTVETVVLHSV  387 (393)
T ss_pred             --------------------------CCCCcceEEEEEeCCcceeeeeeeEec
Confidence                                      001124689999999888888888864

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=99.37  E-value=1.3e-11  Score=137.69  Aligned_cols=231  Identities=13%  Similarity=0.139  Sum_probs=146.8

Q ss_pred             hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC
Q psy11396        196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG  275 (829)
Q Consensus       196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  275 (829)
                      .........|+.+|++.||+++|+++++++    .++++++.+ |                  .....+.+|...+|++.
T Consensus        79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id----~li~~s~~~-~------------------~~P~~a~~i~~~lgl~~  135 (361)
T cd00831          79 DIALEEARELAEEAARGALDEAGLRPSDID----HLVVNTSTG-N------------------PTPSLDAMLINRLGLRP  135 (361)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECCCC-C------------------CCCCHHHHHHHHhCCCc
Confidence            334445678999999999999999999998    777776532 2                  12345678999999973


Q ss_pred             --cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceE
Q psy11396        276 --PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG  352 (829)
Q Consensus       276 --p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaa  352 (829)
                        +++.|. .+|++++.||..|..+|++|..+.+||.++|.++...           .++.   ..+.--..+++||||+
T Consensus       136 ~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~-----------~~~d---~~~~~~~~~lfGDgaa  201 (361)
T cd00831         136 DVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWY-----------RGPD---HRSMLVGNALFGDGAA  201 (361)
T ss_pred             ccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeeccccee-----------CCCC---cHHHhhhhhhccCCce
Confidence              678898 8999999999999999999999999999999854310           0000   0000013577899999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeec--------------CCCCCCCC--CCC--HHHHHHHHHHHHHHc--CCCCCC
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQ--------------DGKTNGIT--APN--TKSQIRLQTKIYKKF--NINPND  412 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~~~~--~p~--~~~~~~ai~~Al~~A--gl~~~d  412 (829)
                      |+||++.+..... ......+.+.....              .+......  .+.  .....++++++|+++  |++++|
T Consensus       202 A~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~d  280 (361)
T cd00831         202 AVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLA  280 (361)
T ss_pred             EEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcccc
Confidence            9999976543110 01112222221110              00000000  000  224567889999999  999999


Q ss_pred             ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHH
Q psy11396        413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~  472 (829)
                      |+++-.|-.+...     .+++.+.++-   ..+.+.. -.+-..+||+.+|+=...|..+
T Consensus       281 id~~~~H~~~~~i-----~~~v~~~lgl---~~~~~~~s~~~l~~~GN~~sasi~~~L~~~  333 (361)
T cd00831         281 FDHWCVHPGGRAV-----LDAVEKALGL---SPEDLEASRMVLRRYGNMSSSSVLYVLAYM  333 (361)
T ss_pred             ceEEEECCCChHH-----HHHHHHHcCC---CHHHHHHHHHHHHHhCCchhccHHHHHHHH
Confidence            9999999655433     2344555542   1111211 1223457999999866666654

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PLN03170 chalcone synthase; Provisional

Probab=99.33  E-value=5.6e-11  Score=133.19  Aligned_cols=346  Identities=12%  Similarity=0.086  Sum_probs=197.4

Q ss_pred             CCEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCC----
Q psy11396        115 DDIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFF----  189 (829)
Q Consensus       115 ~~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f----  189 (829)
                      -+..|.|+|...|. ....+++++.+..--.. ...+..+-.....++. .    ..-.++....++....++.++    
T Consensus        19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-s----gI~~R~~~~~~~~~~~~~~~~~~~~   92 (401)
T PLN03170         19 GPATVLAIGTATPANCVHQADYPDYYFRITKS-EHMTELKEKFKRMCDK-S----QIRKRYMHLTEEYLAENPNMCAYMA   92 (401)
T ss_pred             CCeEEEEEeecCCCccccHHHHHHHHHHHccc-cCchhHHHHHHHHHHh-C----CCCceeEeccccchhhCccccccCC
Confidence            34779999999998 56777777776542210 0011100000011110 0    011111111111111122222    


Q ss_pred             -CCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396        190 -NISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS  268 (829)
Q Consensus       190 -~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  268 (829)
                       .+..+......-.-.|+.+|+++||+++|+++++|+    .+++.+..+ +                  ....++.+|.
T Consensus        93 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg-~------------------~~Ps~a~~l~  149 (401)
T PLN03170         93 PSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT----HLVFCTTSG-V------------------DMPGADYQLT  149 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCC-C------------------CCChHHHHHH
Confidence             345555555556668999999999999999999987    666665432 1                  1223678899


Q ss_pred             hhccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q psy11396        269 YFLNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGF  345 (829)
Q Consensus       269 ~~lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~  345 (829)
                      ..||++.-   .+.+..+|++++.+|..|.+++++|....|||.++|.++...     .     .++. .. ++......
T Consensus       150 ~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~-----~-----~~~~-~~-~~~~~~~~  217 (401)
T PLN03170        150 KMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTF-----R-----GPSE-SH-LDSMVGQA  217 (401)
T ss_pred             HHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhcc-----C-----Cccc-ch-hhhhhhhh
Confidence            99999753   578999999999999999999999999999999999864211     0     0000 00 11112346


Q ss_pred             ccccceEEEEEccchhhhhCCCceEEEEEEeeee----c----------CCCCCCC--CCC--CHHHHHHHHHHHHHHcC
Q psy11396        346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVN----Q----------DGKTNGI--TAP--NTKSQIRLQTKIYKKFN  407 (829)
Q Consensus       346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~----~----------dg~~~~~--~~p--~~~~~~~ai~~Al~~Ag  407 (829)
                      .+||||+|+||+..+...  ...+..++.+.+..    +          .|....+  ..|  -...+...++++|+++|
T Consensus       218 LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~g  295 (401)
T PLN03170        218 LFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLG  295 (401)
T ss_pred             hhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcC
Confidence            889999999998743210  01111123322111    0          1110000  001  12335668888999999


Q ss_pred             CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHHHHH-HhcCCCCCCC
Q psy11396        408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKIILS-LKHKVLPPTI  485 (829)
Q Consensus       408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~~l~-L~~~~ipp~~  485 (829)
                      ++++||+++-+|=-|     ..=.+++.+.++-   ..+.+.. -.+-..+||+.+|+=...|-+.... ++.|.+.+  
T Consensus       296 l~~~di~~~v~Hqgg-----~~il~~v~~~Lgl---~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~--  365 (401)
T PLN03170        296 ITDYNSIFWVAHPGG-----PAILDQVEAKVGL---EKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATT--  365 (401)
T ss_pred             CCccccCeEEecCCc-----HHHHHHHHHHcCC---ChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCC--
Confidence            999999999999433     3334455555542   1111110 0223457999988855555554321 12222211  


Q ss_pred             CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                                                  .....+++..+||.|=+-.+++|+..+.
T Consensus       366 ----------------------------G~~~~~~ll~afGpG~t~~~~ll~~~~~  393 (401)
T PLN03170        366 ----------------------------GEGFDWGVLFGFGPGLTVETVVLHSVPI  393 (401)
T ss_pred             ----------------------------CCCccEEEEEEeCchHhHHhHHheeccc
Confidence                                        0112468899999988888888887443

>PLN03171 chalcone synthase-like protein; Provisional

Probab=99.30  E-value=3.4e-11  Score=135.12  Aligned_cols=270  Identities=13%  Similarity=0.046  Sum_probs=160.2

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..+...+......|+.+|+++||+++|+++++|+    .+++++..+++                   ....+..+...
T Consensus        97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~-------------------~P~~a~~v~~~  153 (399)
T PLN03171         97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSGAH-------------------IPGVDFRLVPL  153 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCC-------------------CCchHHHHHHH
Confidence            33444444556678999999999999999999998    78887765432                   12346688899


Q ss_pred             ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ||++..   .+.+..+|++++.+|..|..+|++|....|||.++|.++...           .+.... .++..-.++++
T Consensus       154 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-----------~~~d~~-~~~~~v~~~LF  221 (399)
T PLN03171        154 LGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLF-----------NGPDEG-CFQTLLNQGLF  221 (399)
T ss_pred             hCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccccc-----------CCCCcc-cHHhhhccccc
Confidence            999743   456677999999999999999999999999999999853211           000000 01111136789


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCC--------------CCCCCCC-HHHHHHHHHHHHHH-------
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKT--------------NGITAPN-TKSQIRLQTKIYKK-------  405 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--------------~~~~~p~-~~~~~~ai~~Al~~-------  405 (829)
                      ||||+|+||++.+...+++   ...|.......++..              ....... +....+.+++++++       
T Consensus       222 GDGAaA~vl~~~~~~~~~~---~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~  298 (399)
T PLN03171        222 GDGAAAVIVGADADAAERP---LFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLG  298 (399)
T ss_pred             cCccEEEEEecCCCCCCCC---ceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999754321111   223333222111110              0011011 23344444666654       


Q ss_pred             --cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhcCCCC
Q psy11396        406 --FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKHKVLP  482 (829)
Q Consensus       406 --Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~~~ip  482 (829)
                        +|++++||+++ .|=.+     ..-.+++.+.++-   ....++.+ .+-..+|++.+|+=...|-.++.+.+.+ +.
T Consensus       299 ~~~g~~~~di~~~-~Hq~~-----~~il~~v~~~Lgl---~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~-~~  368 (399)
T PLN03171        299 GDGGAEWNDLFWA-VHPGS-----SAILDQVDAALGL---EPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEA-AA  368 (399)
T ss_pred             cccCCCcccceEE-EcCCc-----HHHHHHHHHHcCC---CHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhc-CC
Confidence              58889999998 68333     2334455555542   11222211 1223579988877444444433221110 00


Q ss_pred             CCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       483 p~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                    +.....+++..+||.|=+-.+++|+-
T Consensus       369 ------------------------------~G~~~d~vll~~fG~Glt~~~~ll~~  394 (399)
T PLN03171        369 ------------------------------AGAWPELGVMMAFGPGLTVDAMLLHA  394 (399)
T ss_pred             ------------------------------CCCCcceEEEEEEcccHHHHHHHhhc
Confidence                                          00012468899999987777777764

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=99.29  E-value=1.9e-12  Score=132.59  Aligned_cols=142  Identities=11%  Similarity=0.055  Sum_probs=102.1

Q ss_pred             ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhh
Q psy11396        588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA  667 (829)
Q Consensus       588 ~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~  667 (829)
                      ..+.+|.++++.+..|+++++|||+    .||.|+|+..+....+         .+..+..++||+||+++|.|.|+|+.
T Consensus        21 ~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~~~~~---------~l~~~~~~~kpVia~v~g~a~s~gy~   87 (211)
T cd07019          21 VGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASEVIRA---------ELAAARAAGKPVVVSAGGAAASGGYW   87 (211)
T ss_pred             cCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHHHHHH---------HHHHHHhCCCCEEEEECCeehhHHHH
Confidence            3578899999999999999999997    8999999977643321         12223447999999999999999999


Q ss_pred             hhhccccccccccceecccccc------ccccCCCcceeccccccCH---------------------------------
Q psy11396        668 MGLFCDYTIFSEESVYQSPYMR------YGFTPGAGSTLIFPQRFGK---------------------------------  708 (829)
Q Consensus       668 lal~cD~~ia~~~a~f~~~e~~------~Gl~p~~g~~~~l~r~iG~---------------------------------  708 (829)
                      |+++||++++++++.|+...+.      -++.+..|..+.+.+..|.                                 
T Consensus        88 la~~aD~i~a~~~a~~gsiGv~~~~~~~~~~l~k~Gv~~~~~~~~g~~k~~~~~~~s~e~r~~~~~~ld~~~~~f~~~Va  167 (211)
T cd07019          88 ISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLGLQLSIENGYKRFITLVA  167 (211)
T ss_pred             HHHhCCEEEEcCCCEEEEeEEEEEcCCHHHHHHhcCCceEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998743321      0111444433333332120                                 


Q ss_pred             ------HHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396        709 ------ILSREILFTASEFKGKELKERGISMPVLPRKQVL  742 (829)
Q Consensus       709 ------~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~  742 (829)
                            ....+-+..|..|+++||++.||||+|...++..
T Consensus       168 ~~R~~~~~~l~~~~~~~~~~~~~A~~~GLvD~i~~~~~~~  207 (211)
T cd07019         168 DARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV  207 (211)
T ss_pred             hhCCCCHHHHHHhcCCcEEeHHHHHHcCCcccCCCHHHHH
Confidence                  0111235567889999999999999998666544

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.28  E-value=5.3e-11  Score=131.62  Aligned_cols=243  Identities=14%  Similarity=0.109  Sum_probs=159.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      ...|+.+|+++||+++|+++++|+    .+++++..++|.                  ....+.+|...||++.  +++.
T Consensus        60 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~d~~------------------~P~~a~~v~~~Lg~~~~~~~~d  117 (353)
T PRK12880         60 VSDLGKHAANTLLQGLNIDKNSLD----ALIVVTQSPDFF------------------MPSTACYLHQLLNLSSKTIAFD  117 (353)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCceEEe
Confidence            567999999999999999999998    888888776652                  3456788999999963  6788


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      |+.+|++++.||..|..+|++|..+ +|+.+.|.++..           +.       ++.......+||||+|+||++.
T Consensus       118 i~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~-----------~~-------~~d~~~~~lFGDGAaA~vl~~~  178 (353)
T PRK12880        118 LGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKF-----------IH-------PKNMNLAPIFGDGVSATLIEKT  178 (353)
T ss_pred             hhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhcc-----------CC-------cccCCceeeecccceEEEEEec
Confidence            9999999999999999999999999 888888864211           11       1112234678999999999864


Q ss_pred             hhhhhCCCceEEEEEEeeeecC------CCC--CCC-------------------CCCCH--------HHHHHHHHHHHH
Q psy11396        360 KDAKKDGDDIYCIIKGWGVNQD------GKT--NGI-------------------TAPNT--------KSQIRLQTKIYK  404 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~~~~d------g~~--~~~-------------------~~p~~--------~~~~~ai~~Al~  404 (829)
                      +..  .+  + ..+...+...+      +..  ...                   ...++        .....+++++|+
T Consensus       179 ~~~--~~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~  253 (353)
T PRK12880        179 DFN--EA--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILE  253 (353)
T ss_pred             CCC--Cc--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence            321  11  1 11111111000      000  000                   00011        122468899999


Q ss_pred             HcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCC
Q psy11396        405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPT  484 (829)
Q Consensus       405 ~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~  484 (829)
                      ++|++++|||++.+|-     +...-.+++.+.++-   ....++. .+-...|++.+||=...|-..+   +.+     
T Consensus       254 ~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl---~~ek~~~-~~l~~~GNtssasip~~L~~~~---~~~-----  316 (353)
T PRK12880        254 FSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKL---NDDKVPN-FIMEKYANLSACSLPALLCELD---TPK-----  316 (353)
T ss_pred             HcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCC---CHHHhhh-hhHHhhCCHHHHHHHHHHHHHH---HcC-----
Confidence            9999999999999993     344455666666652   1222221 1223468888777444444331   111     


Q ss_pred             CCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        485 INYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                                                     +. .++..+||-|=+-++++|+-.
T Consensus       317 -------------------------------~~-~~ll~~~G~G~s~g~~ll~~~  339 (353)
T PRK12880        317 -------------------------------EF-KASLSAFGAGLSWGSAVLNFK  339 (353)
T ss_pred             -------------------------------Cc-EEEEEEEchhhhheEeEEEEC
Confidence                                           11 168889999888888888864

>PLN03169 chalcone synthase family protein; Provisional

Probab=99.28  E-value=1.3e-10  Score=130.07  Aligned_cols=227  Identities=11%  Similarity=0.076  Sum_probs=140.2

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCc---
Q psy11396        200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGP---  276 (829)
Q Consensus       200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp---  276 (829)
                      .....|+.+|+++||+++|+++++|+    .+++++.. +|.                  .+..+..|...||++..   
T Consensus       104 e~~~~La~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~------------------~P~~a~~l~~~LGl~~~~~~  160 (391)
T PLN03169        104 EAVTQMAVEASLACIKEWGRPVSDIT----HLVYVSSS-EAR------------------LPGGDLYLAKQLGLSPDVQR  160 (391)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECcC-CCC------------------CCcHHHHHHHHhCcCCccee
Confidence            34567999999999999999999998    77777652 331                  22346689999999752   


Q ss_pred             ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEE
Q psy11396        277 CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML  356 (829)
Q Consensus       277 ~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL  356 (829)
                      .+.+..||++++.||..|..+|++|..+.|||.++|.++...     .     .+. ... ++.......+||||+|+||
T Consensus       161 ~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~-----~-----~~~-~~~-~~d~~~~~lFGDGAaA~vl  228 (391)
T PLN03169        161 VMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGF-----R-----PPS-PDR-PYDLVGAALFGDGAAAVII  228 (391)
T ss_pred             eecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhc-----c-----CCC-ccc-hhhhhhhhhccCceEEEEE
Confidence            477899999999999999999999999999999999842111     0     000 000 1222345688999999999


Q ss_pred             ccchhhhhCCCceEEEEEEeee----ecC----------CCC--CCCCCCC--HHHHHHHHHHHHHHcCCCCCCcc--EE
Q psy11396        357 KKLKDAKKDGDDIYCIIKGWGV----NQD----------GKT--NGITAPN--TKSQIRLQTKIYKKFNINPNDIQ--LL  416 (829)
Q Consensus       357 ~~~~~A~~~g~~i~a~I~g~~~----~~d----------g~~--~~~~~p~--~~~~~~ai~~Al~~Agl~~~dId--~v  416 (829)
                      +..+.... ...++ .+...+.    .++          |..  .+...|.  ...+..+++++|+++|++++|||  ++
T Consensus       229 ~~~~~~~~-~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~  306 (391)
T PLN03169        229 GADPIPVS-ESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFW  306 (391)
T ss_pred             ecCCCccc-CCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceE
Confidence            87543210 11111 2222111    000          000  0000011  23346678899999999999998  88


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHH
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIK  471 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~  471 (829)
                      -.|=.+     ..=.+++.+.++-   ..+.++.+ .+-..+||+.+|+=...|-.
T Consensus       307 v~Hq~n-----~~il~~v~~~Lgl---~~ek~~~s~~~l~~~GNtsSasip~~L~~  354 (391)
T PLN03169        307 AVHPGG-----PAILNRLEKKLKL---APEKLECSRRALMDYGNVSSNTIVYVLEY  354 (391)
T ss_pred             EecCCC-----HHHHHHHHHHcCC---CHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence            888443     3334455555541   11222211 12235799988885444433

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=99.26  E-value=5e-11  Score=125.63  Aligned_cols=178  Identities=16%  Similarity=0.169  Sum_probs=125.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID  281 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  281 (829)
                      ...|+.+|+++||++||+++++++    .+++|+..                   +  ....+..++..+|+  |.+.|+
T Consensus        50 e~eLa~eAa~~ALekAGL~~~DID----~IIvGdl~-------------------~--Q~~~As~vA~~LGI--P~fdV~  102 (327)
T TIGR02845        50 ERKLMEDAVNLALKKANLKKDDVD----FFLAGDLL-------------------N--QIITANFVARDLGI--PFLGLY  102 (327)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeCCC-------------------C--cccHHHHHHHHhCC--CEEEEe
Confidence            467999999999999999999998    77777311                   0  11246678888887  889999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD  361 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~  361 (829)
                      ++|+|++.||..|+.+|++|.+|.+||++.+...+.....     +.....+.    .+.......++||||+||++.+ 
T Consensus       103 ~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~p~eyg~----q~~~ta~~tgdGAGA~vl~~~~-  172 (327)
T TIGR02845       103 GACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RYPTEYGV----QKPPTAQWTVTGAGAVLLASTG-  172 (327)
T ss_pred             ccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cccccccc----CCCCeeeEEEcccEEEEEeecC-
Confidence            9999999999999999999999999999999865433211     11111111    1234556789999999998753 


Q ss_pred             hhhCCCceE----EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        362 AKKDGDDIY----CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       362 A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                         .+.+|.    ++|..++.. |+..  +-+--.++....|.+-|++.|.+|+|-|.|..-+-|
T Consensus       173 ---~~~~i~~~t~gkv~d~g~~-d~~n--mgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg  231 (327)
T TIGR02845       173 ---GGPRITSATIGKVVDYGIT-DPLD--MGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLA  231 (327)
T ss_pred             ---CCCceEEEEEEEEEecCCC-Cccc--chhhhhHHHHHHHHHHHHHcCCChhhccEEEecchH
Confidence               233333    334444432 2221  111123456778899999999999999999975444

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PLN03173 chalcone synthase; Provisional

Probab=99.19  E-value=6.5e-10  Score=124.09  Aligned_cols=237  Identities=12%  Similarity=0.103  Sum_probs=147.0

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..+......-...|+.+|+.+||+++|+++++|+    -+++.+..+ +                  .....+.+|...
T Consensus        91 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~-~------------------~~P~~a~~l~~~  147 (391)
T PLN03173         91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSG-V------------------DMPGADYQLTKL  147 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCC-C------------------cccHHHHHHHHH
Confidence            44444455555668999999999999999999997    666665532 1                  012467789999


Q ss_pred             ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ||++.-   .+.+..||++++.+|..|.++++++....|||+++|.++...          ..++.  +..+.--....+
T Consensus       148 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~~~d--~~~~~~v~~~LF  215 (391)
T PLN03173        148 LGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RGPSD--THLDSLVGQALF  215 (391)
T ss_pred             hCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CCccc--cchhhhhhhhhh
Confidence            999763   456899999999999999999999999999999999854111          00000  000001234778


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeee----ecCCC----------CCC--CCCCC--HHHHHHHHHHHHHHcCCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV----NQDGK----------TNG--ITAPN--TKSQIRLQTKIYKKFNIN  409 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~----~~dg~----------~~~--~~~p~--~~~~~~ai~~Al~~Agl~  409 (829)
                      ||||+|+||+..+.. ....+.+ ++.++..    .+++.          ...  ...|.  .......++++|++.|++
T Consensus       216 GDGAaAvvl~~~~~~-~~~~~~~-~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~  293 (391)
T PLN03173        216 GDGAAAIIIGSDPVL-GVEKPLF-ELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGIS  293 (391)
T ss_pred             cCceEEEEEeCCCCC-CcCCcce-EEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999999999864321 0011112 3333221    11111          000  01111  234566888999999999


Q ss_pred             CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHH
Q psy11396        410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~  472 (829)
                      ++||+++-+|--|..     =.+++.+.++-   ..+.+..+ .+-...|++.+||=..-|-+.
T Consensus       294 ~~di~~~v~Hqgg~~-----Il~~v~~~LgL---~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~  349 (391)
T PLN03173        294 DWNSLFWIAHPGGPA-----ILDQVEAKLAL---KPEKLRATRHVLSEYGNMSSACVLFILDEM  349 (391)
T ss_pred             ccccCeEEECCCcHH-----HHHHHHHHcCC---ChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence            999999999944433     34555555542   11111111 123346898888754444443

>PLN03168 chalcone synthase; Provisional

Probab=99.14  E-value=2.2e-09  Score=120.00  Aligned_cols=237  Identities=12%  Similarity=0.119  Sum_probs=145.3

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..+......-...|+.+|+++||+++|+++++|+    .+++++..+ +.                  ....+.+|+..
T Consensus        90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg-~~------------------~Ps~a~~l~~~  146 (389)
T PLN03168         90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT----HIVFATTSG-VN------------------MPGADHALAKL  146 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCC-CC------------------CccHHHHHHHH
Confidence            34444555556668999999999999999999998    788887654 21                  23357889999


Q ss_pred             ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ||++.-   ++.++.||++++.||..|..+|++|....|||+++|.++..     +..     ++.  ...+..-....+
T Consensus       147 LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~-----~~~-----~~~--~~~~~~~~~~LF  214 (389)
T PLN03168        147 LGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVT-----YRA-----PSE--NHLDGLVGSALF  214 (389)
T ss_pred             hCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhh-----ccC-----ccc--ccHHHHhccccc
Confidence            999752   58899999999999999999999999999999999986421     100     000  001111245778


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEee-ee--cCCC----------CCCCCC--C--CHHHHHHHHHHHHHHcCCCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWG-VN--QDGK----------TNGITA--P--NTKSQIRLQTKIYKKFNINP  410 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~-~~--~dg~----------~~~~~~--p--~~~~~~~ai~~Al~~Agl~~  410 (829)
                      ||||+|+||+..+... ....++....... ..  +++.          ...+..  |  -.......+.++++..++..
T Consensus       215 GDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~  293 (389)
T PLN03168        215 GDGAGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD  293 (389)
T ss_pred             cCccEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            9999999999743211 0112222221111 00  1111          000000  0  01234556667777788877


Q ss_pred             CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHH
Q psy11396        411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIK  471 (829)
Q Consensus       411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~  471 (829)
                      .|++++-+|=-|-     .=.+++.+.++-   ..+.+..+ .+-...|++-+||=...|-.
T Consensus       294 ~d~~~~v~Hqgg~-----~Il~~v~~~Lgl---~~ek~~~s~~vl~~yGNtSSaSv~~vL~~  347 (389)
T PLN03168        294 WNEMFWAVHPGGP-----AILDQVEAKLKL---TKDKMQGSRDILSEFGNMSSASVLFVLDQ  347 (389)
T ss_pred             cccceEEecCCcH-----HHHHHHHHHcCC---CHHHHHHHHHHHHHhCccHhhhHHHHHHH
Confidence            8888888994433     334555555542   11222211 12345689888874444433

>PRK08304 stage V sporulation protein AD; Validated

Probab=99.12  E-value=8.2e-10  Score=116.84  Aligned_cols=178  Identities=16%  Similarity=0.198  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID  281 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  281 (829)
                      ...|+.+|+++||++||+++++++    .+|+|...                   +  ....++.++..+|+  |.+.|.
T Consensus        56 eseLa~eAa~~ALekAGI~~~DID----~lI~Gdll-------------------~--Q~~sAs~vA~~LGI--Pa~dV~  108 (337)
T PRK08304         56 ERKMMEDAIQQALQKANLKKSDID----YLLAGDLL-------------------N--QIISANFAARELGI--PFLGLY  108 (337)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCC-------------------C--CcchHHHHHHHhCC--cEEEEe
Confidence            467999999999999999999998    78887321                   0  11345567777876  999999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD  361 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~  361 (829)
                      ++|+|+..||..|+.+|++|.+|.+||++.+.+.+.....     +.-...+..+|    ..-...+.||+|+||.+.. 
T Consensus       109 gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqf-----r~P~eyg~qrp----~taqwtvtGAGA~i~~~~~-  178 (337)
T PRK08304        109 GACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQF-----RFPTEYGGQRP----PTAQWTVTGAGAVLLSREG-  178 (337)
T ss_pred             ccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhc-----cCchhccccCC----CcceEEeeccEEEEEecCC-
Confidence            9999999999999999999999999999999865443211     11112233333    2233468899999998642 


Q ss_pred             hhhCCCceE----EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        362 AKKDGDDIY----CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       362 A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                         .+.+|-    ++|..+++. |...  +-+--.++....|.+-|++.|.+|+|-|.|..-+-|
T Consensus       179 ---~~~~i~~~t~Gkv~D~g~~-d~~n--mgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg  237 (337)
T PRK08304        179 ---SGPRITHATIGKVVDLGIK-DPND--MGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG  237 (337)
T ss_pred             ---CCceEEEEeEEEEEecCCC-Cccc--chhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence               232222    233333331 2211  111123456778899999999999999999975444

>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease

Probab=99.12  E-value=5.8e-11  Score=116.58  Aligned_cols=136  Identities=15%  Similarity=0.146  Sum_probs=103.0

Q ss_pred             CcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccc
Q psy11396        584 LKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIG  663 (829)
Q Consensus       584 ~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~G  663 (829)
                      ++++.++.+|...+..++.|+++++|+|.    ..|.|+++.......            ..+..++||+|+.++|.|.+
T Consensus         7 ~I~~~~~~~l~~~l~~a~~d~~~~~ivl~----~~s~Gg~~~~~~~i~------------~~l~~~~kpvva~~~g~~~s   70 (161)
T cd00394           7 VIEDVSADQLAAQIRFAEADNSVKAIVLE----VNTPGGRVDAGMNIV------------DALQASRKPVIAYVGGQAAS   70 (161)
T ss_pred             EEccchHHHHHHHHHHHHhCCCCceEEEE----EECCCcCHHHHHHHH------------HHHHHhCCCEEEEECChhHH
Confidence            34567788999999999999999999997    357788775543222            12334689999999999999


Q ss_pred             hhhhhhhccccccccccceeccccccccccCCCc-c------------eecc------ccccCHHHHHHHHhcCCccCHH
Q psy11396        664 AGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG-S------------TLIF------PQRFGKILSREILFTASEFKGK  724 (829)
Q Consensus       664 gG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g-~------------~~~l------~r~iG~~~a~e~ll~g~~~~a~  724 (829)
                      +|+.|+++||.|++.+++.|++.....+.....+ .            ...+      .|.+......+.+..+..++++
T Consensus        71 ~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~a~  150 (161)
T cd00394          71 AGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKDLVLTAQ  150 (161)
T ss_pred             HHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCCcEEcHH
Confidence            9999999999999999999999888765432110 0            0011      1223444567888889999999


Q ss_pred             HHHHcCCcccc
Q psy11396        725 ELKERGISMPV  735 (829)
Q Consensus       725 eA~~~GLv~~v  735 (829)
                      ||+++||||+|
T Consensus       151 eA~~~GLvD~i  161 (161)
T cd00394         151 EALEYGLVDAL  161 (161)
T ss_pred             HHHHcCCcCcC
Confidence            99999999986

Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec

>PLN02854 3-ketoacyl-CoA synthase

Probab=99.10  E-value=1.2e-08  Score=115.97  Aligned_cols=327  Identities=13%  Similarity=0.117  Sum_probs=188.6

Q ss_pred             CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      +++|+.+-++|.-|..   .+.+.|-+....-.. +.+              +.-.+-.......|. .+-..+.+..+.
T Consensus       111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~~f~~~~~~~sg~-g~~ty~P~~~~~  174 (521)
T PLN02854        111 SKPVYLVDFACYKPEDERKISVDSFLTMTEENGS-FED--------------ETVQFQRRISTRSGL-GDETYLPRGITS  174 (521)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHcCC-CCH--------------HHHHHHHHHHHhcCC-CCccccCccccC
Confidence            4689999999999984   477777776654311 111              000000001111111 111223334444


Q ss_pred             CCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396        191 ISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS  268 (829)
Q Consensus       191 i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  268 (829)
                      ++|.  ......-.......++.++|+++|+++++|+    -+++.++ +++                  ....++.+|.
T Consensus       175 ~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID----~LIv~cS-~~~------------------p~PSlAa~I~  231 (521)
T PLN02854        175 RPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIG----ILIVNCS-LFN------------------PTPSLSAMIV  231 (521)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC-CCC------------------CCCCHHHHHH
Confidence            5543  2233334456777889999999999999997    6666432 222                  1235678899


Q ss_pred             hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC--
Q psy11396        269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN--  343 (829)
Q Consensus       269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~--  343 (829)
                      ..||++.  .++.++ .||++++.||..|.++|++|....+||+++|.++..+                 .+-+....  
T Consensus       232 n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~-----------------y~g~Drs~lv  294 (521)
T PLN02854        232 NHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNW-----------------YFGNDRSMLL  294 (521)
T ss_pred             HHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCC-----------------CCCCchhhhc
Confidence            9999973  578888 8999999999999999999999999999999864110                 00011122  


Q ss_pred             -CcccccceEEEEEccchhhhhC-CCceEEEEEEeeeecCCC-----------------CCCCCCCC--HHH--------
Q psy11396        344 -GFVPGEGVGVLMLKKLKDAKKD-GDDIYCIIKGWGVNQDGK-----------------TNGITAPN--TKS--------  394 (829)
Q Consensus       344 -G~~~gEGaaalvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~-----------------~~~~~~p~--~~~--------  394 (829)
                       .+.+||||||+||++.+....+ ..+....+ .+...+|+.                 ..+...|.  +..        
T Consensus       295 ~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v-~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~  373 (521)
T PLN02854        295 CNCIFRMGGAAVLLSNKARDRKRSKYQLVHTV-RTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTL  373 (521)
T ss_pred             ceeeeccceeEEEEecccccccccchheeeEE-EEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhc
Confidence             4678999999999874321110 11111111 111111110                 00000000  000        


Q ss_pred             -------------HHHHHHHHHHHcCCCC------CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCccc
Q psy11396        395 -------------QIRLQTKIYKKFNINP------NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKS  455 (829)
Q Consensus       395 -------------~~~ai~~Al~~Agl~~------~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~  455 (829)
                                   ....+++.|.++|+++      .|||++..|.-|..     =.+++.+.++-...+.+  +.-..-.
T Consensus       374 g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~-----IId~v~k~LgL~~~~~e--~sr~tL~  446 (521)
T PLN02854        374 GPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRA-----VLDELQKNLQLSDWHME--PSRMTLH  446 (521)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHH-----HHHHHHHHcCCCccccc--chHHHhh
Confidence                         2456788888999987      69999999955543     34555655552111111  1112223


Q ss_pred             CcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEE
Q psy11396        456 NIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIV  535 (829)
Q Consensus       456 ~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~v  535 (829)
                      .+|++.+||=...|..+.   +.|.+                                 ++..+++.-+||.|=+-.++|
T Consensus       447 rfGNTSSASI~~~L~~~~---~kGri---------------------------------k~GD~Vl~iaFGsGft~~sav  490 (521)
T PLN02854        447 RFGNTSSSSLWYELAYTE---AKGRV---------------------------------SAGDRVWQIAFGSGFKCNSAV  490 (521)
T ss_pred             hcCChHhhHHHHHHHHHH---HcCCC---------------------------------CCCCEEEEEEEchhhhhhhee
Confidence            458888877444444432   23222                                 123568889999887777788


Q ss_pred             eeecc
Q psy11396        536 LMEKI  540 (829)
Q Consensus       536 l~e~~  540 (829)
                      ++--.
T Consensus       491 ~~~~~  495 (521)
T PLN02854        491 WKALR  495 (521)
T ss_pred             eEEec
Confidence            87543

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=99.07  E-value=4.3e-09  Score=117.76  Aligned_cols=214  Identities=14%  Similarity=0.101  Sum_probs=136.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv  280 (829)
                      ..|+++|+++||+++  ++++|+    .+++++..+.+.                  ....+..|...||+++  +++.+
T Consensus        50 ~~la~~Aa~~aL~~a--~~~~Id----~li~~t~s~~~~------------------~~s~a~~v~~~Lgl~~~~~~~dv  105 (379)
T TIGR01835        50 VTMAASAAKPILDRN--DKQKID----MVIFGTESGIDQ------------------SKAAAVYVHGLLGLQPFCRSFEL  105 (379)
T ss_pred             HHHHHHHHHHHHHhC--CHhhCC----EEEEEeCCCCCC------------------CCCHHHHHHHHhCCCCCceEEEe
Confidence            579999999999998  677887    778887654431                  2236778999999964  78889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      ..+|++++.||..|.++|++|..+.+||.++|.....             .        ....-...||||+|+||++..
T Consensus       106 ~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~-------------~--------~~~~~~~~GdGA~A~Ll~~~~  164 (379)
T TIGR01835       106 KQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG-------------L--------ESPGEPTQGAGAVAMLVSADP  164 (379)
T ss_pred             ccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc-------------c--------CCCCCccccCccEEEEEecCC
Confidence            9999999999999999999999999999999862100             0        011124579999999998631


Q ss_pred             hhhhCCCceEEEEEEeeeecCC-C----CCCCCCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDG-K----TNGITAP--N--------TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL  425 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg-~----~~~~~~p--~--------~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~  425 (829)
                             .+...-.+....++. .    ..+...|  +        ......++++.+++.|++++|||++..|-..++.
T Consensus       165 -------~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~  237 (379)
T TIGR01835       165 -------KLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKM  237 (379)
T ss_pred             -------CeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcH
Confidence                   222111111111111 0    0011111  1        1234578888899999999999999999765554


Q ss_pred             CChHHHHHHHHHhcccCCCC-Cccc-----cCCcccCcCcchhhhhHHHHHHH
Q psy11396        426 GDPIEFEALCESFNKFSYHK-NFCA-----LGSVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       426 gD~~E~~Al~~~~~~~~~~~-~~~~-----v~s~k~~~GH~~gAsG~~~li~~  472 (829)
                      .-    +++.+++....... +.+.     -...-..+||+.+|+=...|..+
T Consensus       238 ~~----k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~  286 (379)
T TIGR01835       238 GL----KALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASL  286 (379)
T ss_pred             HH----HHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHH
Confidence            21    22222222111000 0000     00123368999999866666655

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PLN02377 3-ketoacyl-CoA synthase

Probab=99.04  E-value=3.2e-08  Score=112.53  Aligned_cols=189  Identities=13%  Similarity=0.154  Sum_probs=121.5

Q ss_pred             CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      +++|+.+-++|.-|..   .+.+.|-+....-. .+.+        +.+      ..-+......|. .+-..+.+..+.
T Consensus        95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-~~~~--------~~~------~f~~ri~~~sgi-g~~t~~p~~~~~  158 (502)
T PLN02377         95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTG-DFDD--------SSL------EFQRKILERSGL-GEDTYVPEAMHY  158 (502)
T ss_pred             CCCEEEEeeeeecCCccccccHHHHHHHHHHhC-CCCH--------HHH------HHHHHHHHhcCC-CCccccCchhcc
Confidence            4689999999999984   46777776665331 1111        000      000000111111 111112222222


Q ss_pred             CCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396        191 ISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS  268 (829)
Q Consensus       191 i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  268 (829)
                      ++|.  ......-...++..|+.+||+++|+++++|+    -+++ +..+.+                  ....++..|.
T Consensus       159 ~~~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID----~LVv-~cS~~~------------------~~PSlaa~V~  215 (502)
T PLN02377        159 IPPRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIG----ILVV-NCSLFN------------------PTPSLSAMIV  215 (502)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEE-ECCCCC------------------CCCcHHHHHH
Confidence            3332  2333344567999999999999999999997    5555 333221                  1234678899


Q ss_pred             hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC--
Q psy11396        269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN--  343 (829)
Q Consensus       269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~--  343 (829)
                      ..||++.  .++.++ .||++++.||..|.++|++|....|||+++|.++..+.                  ++.+..  
T Consensus       216 ~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~------------------~~d~~s~l  277 (502)
T PLN02377        216 NKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWY------------------FGNKKSML  277 (502)
T ss_pred             HHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccC------------------CCCCcccc
Confidence            9999974  688899 69999999999999999999999999999998642210                  111222  


Q ss_pred             --CcccccceEEEEEccc
Q psy11396        344 --GFVPGEGVGVLMLKKL  359 (829)
Q Consensus       344 --G~~~gEGaaalvL~~~  359 (829)
                        .+.+||||||+||++.
T Consensus       278 v~n~LFgDGAaAvlLs~~  295 (502)
T PLN02377        278 IPNCLFRVGGSAVLLSNK  295 (502)
T ss_pred             ccceeeccccEEEEEecc
Confidence              3678999999999874

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=99.04  E-value=1e-08  Score=115.54  Aligned_cols=176  Identities=12%  Similarity=0.056  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh---hhccCCC-cc
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS---YFLNLQG-PC  277 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---~~lgl~G-p~  277 (829)
                      ..-|+++|++.||+++|+++++|+    -+++||..+.+.                  ....+..|.   ..+|.+. ++
T Consensus        53 ~~tmA~~AA~~aL~~agid~~~Id----llivaTeT~~d~------------------~ps~A~~v~~ll~~LG~~~~~a  110 (459)
T PLN02577         53 VISMSLTVVKSLLEKYNIDPKQIG----RLEVGSETVIDK------------------SKSIKTFLMQLFEESGNTDIEG  110 (459)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCchHHHHHHHHHHhCCCCcEE
Confidence            346999999999999999999998    889998765432                  122344443   4456643 67


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCC--CEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEE
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNS--KIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLM  355 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalv  355 (829)
                      +-+..+|+++..||..|..+|++|..  +.+||+|+|......        +         | . +   ..-|+||+|+|
T Consensus       111 fDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~--------~---------~-~-e---~t~GdGA~A~l  168 (459)
T PLN02577        111 VDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAE--------G---------P-A-R---PTGGAGAVAML  168 (459)
T ss_pred             eehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccC--------C---------C-C-C---CCCCcceEEEE
Confidence            88999999999999999999999985  999999999742110        0         0 0 1   12299999999


Q ss_pred             EccchhhhhCCCceEEEEEEeeee--cCCCCCC--CCCC--C----H----HHHHHHHHHHHHHc------CCCCCCccE
Q psy11396        356 LKKLKDAKKDGDDIYCIIKGWGVN--QDGKTNG--ITAP--N----T----KSQIRLQTKIYKKF------NINPNDIQL  415 (829)
Q Consensus       356 L~~~~~A~~~g~~i~a~I~g~~~~--~dg~~~~--~~~p--~----~----~~~~~ai~~Al~~A------gl~~~dId~  415 (829)
                      |+..+.    + .+-....|....  .|-..+.  ...|  +    .    .....+.++.+++.      |++++|+||
T Consensus       169 v~~~~~----~-~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~  243 (459)
T PLN02577        169 VGPNAP----I-VFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDADY  243 (459)
T ss_pred             EccCCC----c-eeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCE
Confidence            985321    1 010011122211  0000000  0001  1    1    12233444444444      888999999


Q ss_pred             EEecCCCCCCC
Q psy11396        416 LEAHGTGTKLG  426 (829)
Q Consensus       416 ve~hgtgt~~g  426 (829)
                      +..|-..+++.
T Consensus       244 ~vfHqP~~km~  254 (459)
T PLN02577        244 FVFHAPYNKLV  254 (459)
T ss_pred             EEecCCccchh
Confidence            99998877663

>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=99.03  E-value=1.7e-10  Score=113.02  Aligned_cols=128  Identities=16%  Similarity=0.130  Sum_probs=91.8

Q ss_pred             cccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhh
Q psy11396        589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAM  668 (829)
Q Consensus       589 ~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~l  668 (829)
                      +.+++...+..++.+..+ .+.|.+.      |+++..-..            ....+..+|||+|+.++|.|.++|+.+
T Consensus        16 ~~~~~~~~l~~~~~~~~i-~l~insp------GG~~~~~~~------------i~~~i~~~~~pvi~~v~g~a~s~g~~i   76 (160)
T cd07016          16 TAKEFKDALDALGDDSDI-TVRINSP------GGDVFAGLA------------IYNALKRHKGKVTVKIDGLAASAASVI   76 (160)
T ss_pred             CHHHHHHHHHhccCCCCE-EEEEECC------CCCHHHHHH------------HHHHHHhcCCCEEEEEcchHHhHHHHH
Confidence            455666777777766333 4445543      444433221            122233479999999999999999999


Q ss_pred             hhccccccccccceeccccccccccCCCc---------------ceeccccccC--HHHHHHHHhcCCccCHHHHHHcCC
Q psy11396        669 GLFCDYTIFSEESVYQSPYMRYGFTPGAG---------------STLIFPQRFG--KILSREILFTASEFKGKELKERGI  731 (829)
Q Consensus       669 al~cD~~ia~~~a~f~~~e~~~Gl~p~~g---------------~~~~l~r~iG--~~~a~e~ll~g~~~~a~eA~~~GL  731 (829)
                      +++||+|+++++++|++.....+..+...               ....+.+..|  .....+++..+..++++||+++||
T Consensus        77 a~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a~eA~~~Gl  156 (160)
T cd07016          77 AMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTAQEAVELGF  156 (160)
T ss_pred             HhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcHHHHHHcCC
Confidence            99999999999999999777655543321               1223667778  677788877778899999999999


Q ss_pred             cccc
Q psy11396        732 SMPV  735 (829)
Q Consensus       732 v~~v  735 (829)
                      ||+|
T Consensus       157 iD~v  160 (160)
T cd07016         157 ADEI  160 (160)
T ss_pred             CCcC
Confidence            9986

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=99.02  E-value=1.4e-10  Score=135.62  Aligned_cols=151  Identities=16%  Similarity=0.149  Sum_probs=113.2

Q ss_pred             cccccchhhhcccccceeeeeeCC---CCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhh
Q psy11396        591 KGITDAFSYINSSVQYKVIIITGY---ENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA  667 (829)
Q Consensus       591 ~eL~~~l~~~~~d~~vr~vVl~g~---g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~  667 (829)
                      +.+...++.+++|+++++|||+-.   |..|++  |     ...+         .+......+||+|+.++|.|.+||..
T Consensus       332 ~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as--e-----~i~~---------~i~~~~~~gKPVva~~~g~aaSggY~  395 (584)
T TIGR00705       332 DTVAALLRVARSDPDIKAVVLRINSPGGSVFAS--E-----IIRR---------ELARAQARGKPVIVSMGAMAASGGYW  395 (584)
T ss_pred             HHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH--H-----HHHH---------HHHHHHhCCCcEEEEECCccccHHHH
Confidence            456677888999999999999843   233332  1     1111         11112236799999999999999999


Q ss_pred             hhhcccccccccccee------cccc------ccccccCCCcceecccc----------------------------ccC
Q psy11396        668 MGLFCDYTIFSEESVY------QSPY------MRYGFTPGAGSTLIFPQ----------------------------RFG  707 (829)
Q Consensus       668 lal~cD~~ia~~~a~f------~~~e------~~~Gl~p~~g~~~~l~r----------------------------~iG  707 (829)
                      ++++||.+++++.+.+      +.+.      .++|+.+....+..+.+                            +++
T Consensus       396 iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va  475 (584)
T TIGR00705       396 IASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEAGYRRFLSVVS  475 (584)
T ss_pred             HHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876      5442      57899987776665554                            555


Q ss_pred             HHH-----HHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcC-CHHHHH
Q psy11396        708 KIL-----SREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL-SKKELE  761 (829)
Q Consensus       708 ~~~-----a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~  761 (829)
                      ..+     ..+.+.+|+.|+++||+++||||++.   .+ +++.+.+.+++.. ++..+.
T Consensus       476 ~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~-~~Ai~~a~~la~~~~~~~v~  531 (584)
T TIGR00705       476 AGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GL-DEAVAKAAKLAHCREQWSVE  531 (584)
T ss_pred             hhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CH-HHHHHHHHHHcCCCCCceEE
Confidence            555     77788999999999999999999994   44 6677888888887 554444

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad

Probab=99.00  E-value=3.8e-10  Score=115.97  Aligned_cols=142  Identities=16%  Similarity=0.172  Sum_probs=97.1

Q ss_pred             cccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccch
Q psy11396        585 KNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGA  664 (829)
Q Consensus       585 ~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~Gg  664 (829)
                      .+..++.+|.++++.+++|+++++|||+    .+|.|+++........         .+..... +||+||+++|.|.|+
T Consensus        22 ~~~~~~~~l~~~l~~a~~d~~i~~Vvl~----~~s~gg~~~~~~~l~~---------~l~~~~~-~KpViA~v~g~a~s~   87 (214)
T cd07022          22 SGLTSYEGIAAAIRAALADPDVRAIVLD----IDSPGGEVAGVFELAD---------AIRAARA-GKPIVAFVNGLAASA   87 (214)
T ss_pred             CCcccHHHHHHHHHHHhhCCCCcEEEEE----EeCCCCcHHHHHHHHH---------HHHHHhc-CCCEEEEECCchhhH
Confidence            3456789999999999999999999997    4667777654322111         1111112 599999999999999


Q ss_pred             hhhhhhccccccccccceecccccc------------ccccCCCcc--ee------------------------------
Q psy11396        665 GWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGS--TL------------------------------  700 (829)
Q Consensus       665 G~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~--~~------------------------------  700 (829)
                      |+.++++||++++++++.|+...+.            +|+-+..--  .+                              
T Consensus        88 gy~lA~~aD~i~a~~~a~~g~iG~~~~~~~~~~ll~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~re~~~~~l~~~~~~f~  167 (214)
T cd07022          88 AYWIASAADRIVVTPTAGVGSIGVVASHVDQSKALEKAGLKVTLIFAGAHKVDGNPDEPLSDEARARLQAEVDALYAMFV  167 (214)
T ss_pred             HHHHHhcCCEEEEcCCCeEEeeeEEEecCCHHHHHHhCCCeEEEEEcCCCccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997654333            232211100  00                              


Q ss_pred             -cc--ccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396        701 -IF--PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL  742 (829)
Q Consensus       701 -~l--~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~  742 (829)
                       .+  .|.+......+++  |+.|++++|++.||||++...+++.
T Consensus       168 ~~V~~~R~~~~~~~~~~~--~~~~~~~~Al~~gLvD~i~~~~~~~  210 (214)
T cd07022         168 AAVARNRGLSAAAVRATE--GGVFRGQEAVAAGLADAVGTLDDAL  210 (214)
T ss_pred             HHHHHhCCCCHHHHHHhh--cCeeeHHHHHHcCCCcccCCHHHHH
Confidence             00  0112222333444  9999999999999999998766654

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=98.96  E-value=3.7e-08  Score=106.01  Aligned_cols=214  Identities=18%  Similarity=0.218  Sum_probs=147.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc--ee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC--LA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~--~t  279 (829)
                      ..-|+++|++++|.++++++..|.    .|++|+..+.+..                  -..+..|+..||+.--+  +-
T Consensus        51 ~vTmaveAA~~~l~r~~~D~~~Ig----~v~vgTES~~d~~------------------K~~at~v~~~lg~~~~~~~~d  108 (377)
T COG3425          51 AVTMAVEAARNALKRADIDPSKIG----AVIVGSESGPDAV------------------KPTATIVAEALGLNPSARAAD  108 (377)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHCc----eEEEecCCCcccc------------------cchHHHHHHHhCCCCceehhh
Confidence            345999999999999999988887    8999987765531                  23567788999996433  33


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      +..+|-+|..||..|..+|.+|..+.+||.|.|......        +             +.--..-|.|++|+|+..-
T Consensus       109 ~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~--------~-------------~~~E~t~GAGavA~lIg~n  167 (377)
T COG3425         109 VEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAP--------G-------------DALEYTAGAGAVAFLIGKN  167 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCC--------C-------------cccCccCCCceEEEEEccC
Confidence            889999999999999999999999999999999742110        0             0111346899999999852


Q ss_pred             hhhhhCCCceEEEEEEeeeec-CCC----CCCCCCCC----------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396        360 KDAKKDGDDIYCIIKGWGVNQ-DGK----TNGITAPN----------TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~~~~-dg~----~~~~~~p~----------~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~  424 (829)
                             .++.+++.+.+... |-.    ....+.|.          ......+.+..+++.|++|+|.||+..|-+.+.
T Consensus       168 -------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k  240 (377)
T COG3425         168 -------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK  240 (377)
T ss_pred             -------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCc
Confidence                   34556665555432 211    11122222          234566777778899999999999999988776


Q ss_pred             CCChHHHHHHHHHhcccCCCCCccccCC-cccCcCcchhhhhHHHHHHHH
Q psy11396        425 LGDPIEFEALCESFNKFSYHKNFCALGS-VKSNIGHSATAAGVIGMIKII  473 (829)
Q Consensus       425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s-~k~~~GH~~gAsG~~~li~~~  473 (829)
                      .    =..++..+.-.    .+.+.-+- ....+|.+..+|..++|+.++
T Consensus       241 ~----~~ka~k~l~~~----~e~v~~~l~~~~~vGN~YtgS~~L~Las~L  282 (377)
T COG3425         241 F----PKKAAKSLGFK----EEQVKPGLVYPQRIGNTYTGSLLLGLASLL  282 (377)
T ss_pred             h----HHHHHHHhCcc----HhhcCccchhhhhcCcccchhHHHHHHHHH
Confidence            5    22333332211    11111222 223689999999999998875

>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.90  E-value=1.7e-09  Score=110.81  Aligned_cols=141  Identities=13%  Similarity=0.114  Sum_probs=98.4

Q ss_pred             cccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhh
Q psy11396        587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGW  666 (829)
Q Consensus       587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~  666 (829)
                      +.++.+|...++.+++|+++++||+++    +|.|+|+.......         ..+..+..++||+||+++|.|.|+|+
T Consensus        16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~~i~---------~~i~~~~~~~kpvia~v~g~~~s~g~   82 (208)
T cd07023          16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASEEIY---------REIRRLRKAKKPVVASMGDVAASGGY   82 (208)
T ss_pred             CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHHHHH---------HHHHHHHhcCCcEEEEECCcchhHHH
Confidence            568899999999999999999999986    68899886532211         11222334799999999999999999


Q ss_pred             hhhhccccccccccceecccccc------------ccccCCCcce--------e---------------------cc---
Q psy11396        667 AMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGST--------L---------------------IF---  702 (829)
Q Consensus       667 ~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~~--------~---------------------~l---  702 (829)
                      .++++||++++++++.|+...+.            +|+-+.....        .                     .+   
T Consensus        83 ~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~~f~~~  162 (208)
T cd07023          83 YIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALVDDIYDQFVDV  162 (208)
T ss_pred             HHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999988643222            3333321100        0                     00   


Q ss_pred             ---ccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH
Q psy11396        703 ---PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV  741 (829)
Q Consensus       703 ---~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l  741 (829)
                         .|.+..... +-++.|..|++++|++.||||++...++.
T Consensus       163 Va~~R~~~~~~~-~~~~~~~~~~a~~A~~~gLiD~i~~~~~~  203 (208)
T cd07023         163 VAEGRGMSGERL-DKLADGRVWTGRQALELGLVDELGGLDDA  203 (208)
T ss_pred             HHhcCCCCHHHH-HHhcCCcEEEHHHHHHcCCCcccCCHHHH
Confidence               000111112 23567888999999999999999865544

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=98.88  E-value=2e-09  Score=99.16  Aligned_cols=120  Identities=13%  Similarity=0.173  Sum_probs=79.0

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF  447 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~  447 (829)
                      +|+++|.+++..........     .+...+++++|+++|++++|||++|.|..++..    +...++ .++-     ..
T Consensus         2 ~pla~i~~~~~~~~~P~~~~-----~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~----~l~~~~-~lg~-----~~   66 (123)
T PF02803_consen    2 KPLARIVGYASAGVDPEDMG-----LGPVPAARKALERAGLTPDDIDVIEINEAFAAQ----VLAFLE-ALGL-----DP   66 (123)
T ss_dssp             -ESEEEEEEEEEE--GGGGG-----GTHHHHHHHHHHHHT--GGGESEEEE--SBHHH----HHHHHH-HHTT-----GG
T ss_pred             CeEEEEEEEEEEecCHHHhC-----chHHHHHHHHHHHhCCCccccchhhccchhhhH----HHHhhc-cccc-----cc
Confidence            57899999987654332222     234679999999999999999999999554422    222222 2331     11


Q ss_pred             cccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEecc
Q psy11396        448 CALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF  525 (829)
Q Consensus       448 ~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~  525 (829)
                      .+|+...+.  +|||.||||+..++.++.+|+++                                    ..++++++..
T Consensus        67 ~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~------------------------------------~~~~gla~~~  110 (123)
T PF02803_consen   67 EKVNPNGGALALGHPLGASGARLVVELAHQLRRR------------------------------------GGRYGLAAIC  110 (123)
T ss_dssp             GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHH------------------------------------TTSEEEEEEE
T ss_pred             cccCcccccccccccccccccchhhhhHHHHHHh------------------------------------chhhhhHHhc
Confidence            344444443  59999999999999999999762                                    2356888888


Q ss_pred             CCCCceEEEEeee
Q psy11396        526 GFSGTNAHIVLME  538 (829)
Q Consensus       526 G~gG~na~~vl~e  538 (829)
                      +-||...++|||.
T Consensus       111 ~ggG~g~a~ller  123 (123)
T PF02803_consen  111 AGGGQGSAVLLER  123 (123)
T ss_dssp             ETTTEEEEEEEEE
T ss_pred             ccceeeEEEEEEC
Confidence            8899999999984

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>PRK12404 stage V sporulation protein AD; Provisional

Probab=98.87  E-value=3.7e-08  Score=103.71  Aligned_cols=178  Identities=17%  Similarity=0.192  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID  281 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  281 (829)
                      ...|+.+|+.+||++||+++++|+    .+|+|+..+                     ....++.++..+|+  |.+.|.
T Consensus        54 E~~L~~EA~~~AL~kAGI~~~DID----~i~vGdL~n---------------------Q~ipssfvar~LGI--P~~gV~  106 (334)
T PRK12404         54 ERKLLEEACSRAIEKAKLRKEDIQ----FFLAGDLMN---------------------QITPTSFAARTLGI--PYLGLF  106 (334)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC---------------------CcCcHHHHHHHhCC--Ccccee
Confidence            457999999999999999999998    788875431                     11233467777774  789999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD  361 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~  361 (829)
                      ++|||+..||..|+.+|++|.+|.+||+-.....+....     -+.-...+.-||....    ..--|+|++||.+.. 
T Consensus       107 gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErq-----fR~P~eyG~Qrp~taq----wTvTgaga~~l~~~~-  176 (334)
T PRK12404        107 GACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQ-----FRYPTEYGGQKPPTAQ----WTVTGAGAAILSKTG-  176 (334)
T ss_pred             ecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhh-----ccCcccccCcCCCccc----EEEEceEEEEEecCC-
Confidence            999999999999999999999999999988765443321     1222233444553321    123468888887531 


Q ss_pred             hhhCCCceE----EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        362 AKKDGDDIY----CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       362 A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                         .+.+|.    ++|..+++. |...  +-+--.++....|.+-|++.|.+|+|-|.|..-+-|
T Consensus       177 ---~~~~i~~~T~Gkv~D~g~~-d~~n--MGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg  235 (334)
T PRK12404        177 ---DGPRVTSATIGRVVDMGLT-DPFN--MGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLG  235 (334)
T ss_pred             ---CCceEEEEEEEEEEecCCC-Cccc--chhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchH
Confidence               233332    233333331 2211  111123456778899999999999999999975443

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=98.86  E-value=2.2e-07  Score=104.84  Aligned_cols=176  Identities=14%  Similarity=0.090  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhcc---CCC-cc
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLN---LQG-PC  277 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg---l~G-p~  277 (829)
                      ...|++.|+..+|+++|+++++|+    -+++|+..+.+.                  ....+..|...|+   .+. .+
T Consensus        50 ~~tma~~AA~~lL~~a~id~~~Id----~Liv~TeS~~d~------------------sps~a~~v~~lL~~lG~~~~~~  107 (454)
T TIGR01833        50 INSLCLTVVSKLMERYNIDYNQIG----RLEVGTETIIDK------------------SKSVKTVLMQLFEESGNTDVEG  107 (454)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CCchHHHHHHHHHhcCCCCceE
Confidence            456999999999999999999998    888888776553                  1224555666444   432 57


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCC--CEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEE
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNS--KIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLM  355 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalv  355 (829)
                      +-+..+|+++..||..|..+|++|..  +.+||++.|......              +..        -...|+||+|+|
T Consensus       108 fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~--------------~~~--------~~t~GaGAvAmL  165 (454)
T TIGR01833       108 IDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAK--------------GNA--------RPTGGAGAVAML  165 (454)
T ss_pred             EeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccC--------------CCe--------eeccccceEEEE
Confidence            78999999999999999999999974  999999999832110              001        113499999999


Q ss_pred             EccchhhhhCCCceEEEEEEeeeecCC--CCCCCC--CC------CHHHHHHHHHHHH-----------HHc----CCCC
Q psy11396        356 LKKLKDAKKDGDDIYCIIKGWGVNQDG--KTNGIT--AP------NTKSQIRLQTKIY-----------KKF----NINP  410 (829)
Q Consensus       356 L~~~~~A~~~g~~i~a~I~g~~~~~dg--~~~~~~--~p------~~~~~~~ai~~Al-----------~~A----gl~~  410 (829)
                      |.+... ..-+.    .+.++.+....  ..+...  .|      +.....+++.++|           +++    +..+
T Consensus       166 v~~~~~-~~~~~----~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~  240 (454)
T TIGR01833       166 IGPNAP-IVFER----GLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL  240 (454)
T ss_pred             eccCcc-ceecC----ccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence            985432 11111    11222222111  111111  11      2233445544443           333    5788


Q ss_pred             CCccEEEecCCCCCCC
Q psy11396        411 NDIQLLEAHGTGTKLG  426 (829)
Q Consensus       411 ~dId~ve~hgtgt~~g  426 (829)
                      +|+||+..|-..+++.
T Consensus       241 ~dfd~~~fH~P~~km~  256 (454)
T TIGR01833       241 NDFDYMVFHSPYCKLV  256 (454)
T ss_pred             hHcCEEeccCCcccHH
Confidence            9999999998888763

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type

Probab=98.83  E-value=3.2e-09  Score=108.47  Aligned_cols=141  Identities=16%  Similarity=0.146  Sum_probs=97.6

Q ss_pred             ccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccC--CCCEEEEecccccchhhh
Q psy11396        590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYC--KIPVIAAMQGHAIGAGWA  667 (829)
Q Consensus       590 ~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~--~kp~Iaav~G~a~GgG~~  667 (829)
                      ..+|.+.++.+.+|+++++|||+.    .|.|+++........            .+..+  +||+||.++|.|.++|+.
T Consensus        15 ~~~l~~~l~~a~~d~~i~~vvl~~----~s~Gg~~~~~~~l~~------------~i~~~~~~kpvia~v~g~a~s~g~~   78 (207)
T TIGR00706        15 PEDFDKKIKRIKDDKSIKALLLRI----NSPGGTVVASEEIYE------------KLKKLKAKKPVVASMGGVAASGGYY   78 (207)
T ss_pred             HHHHHHHHHHHhhCCCccEEEEEe----cCCCCCHHHHHHHHH------------HHHHhcCCCCEEEEECCccchHHHH
Confidence            467888899999999999999985    477888755433221            12223  599999999999999999


Q ss_pred             hhhccccccccccceecccccc------------ccccCCC---------ccee--------------------------
Q psy11396        668 MGLFCDYTIFSEESVYQSPYMR------------YGFTPGA---------GSTL--------------------------  700 (829)
Q Consensus       668 lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~---------g~~~--------------------------  700 (829)
                      ++++||.+++++++.|+...+.            +|+-+..         +..+                          
T Consensus        79 la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~~f~~~v  158 (207)
T TIGR00706        79 IAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNESYEQFVQVV  158 (207)
T ss_pred             HHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999887664332            2332100         0000                          


Q ss_pred             ccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHH
Q psy11396        701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLK  747 (829)
Q Consensus       701 ~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~  747 (829)
                      .-.|.+......+ ++.++.|++++|++.||||++...+++.+...+
T Consensus       159 a~~R~~~~~~~~~-~~~~~~~~~~~A~~~gLvD~i~~~~~~~~~~~~  204 (207)
T TIGR00706       159 AKGRNLPVEDVKK-FADGRVFTGRQALKLRLVDKLGTEDDALKWLAE  204 (207)
T ss_pred             HhcCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence            0012222223333 467899999999999999999877776654443

The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=98.82  E-value=7.7e-09  Score=109.67  Aligned_cols=94  Identities=23%  Similarity=0.372  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ...|+.++++++|+++|+++++++    .|++|+..+..                  ....++..++...||  .-|.++
T Consensus        26 ~~~L~~~a~~~al~~~~i~~~~Id----~v~~G~~~~~~------------------~g~~~ar~~~l~aGl~~~vp~~~   83 (264)
T PF00108_consen   26 PEDLAAEAVKAALERAGIDPEDID----AVIVGNVLQEG------------------EGQNIARQAALAAGLPESVPATT   83 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTSHGGGEE----EEEEE-SSSCT------------------TTCHHHHHHHHHTTS-TTSEEEE
T ss_pred             HHHHHHHHHHHHHHhcccchhhhh----hcCcccccccc------------------cchhhhhhhhhhcccccccceee
Confidence            456889999999999999999998    78888654321                  122345566677777  359999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccCh
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP  317 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~  317 (829)
                      |+.+|+||+.||.+|++.|++|++|++||||+|.|+..
T Consensus        84 V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~  121 (264)
T PF00108_consen   84 VNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRV  121 (264)
T ss_dssp             EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTS
T ss_pred             ehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccc
Confidence            99999999999999999999999999999999998654

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad

Probab=98.73  E-value=1.4e-08  Score=105.00  Aligned_cols=147  Identities=12%  Similarity=-0.019  Sum_probs=103.6

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccccc
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAI  662 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~  662 (829)
                      ...+..++.+|...++.+.+|+++++|||+..+..| ++.+..++...-            ..+...+||+||.++| |.
T Consensus        24 ~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~~~i------------~~~~~~~kpVia~~~~-~~   89 (222)
T cd07018          24 GESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELRQAL------------ERFRASGKPVIAYADG-YS   89 (222)
T ss_pred             CCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHHHHH------------HHHHHhCCeEEEEeCC-CC
Confidence            334566788999999999999999999999988777 667776653211            1112258999999998 88


Q ss_pred             chhhhhhhccccccccccceecccccc------------ccccCCCc--------ceecc--------------------
Q psy11396        663 GAGWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAG--------STLIF--------------------  702 (829)
Q Consensus       663 GgG~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g--------~~~~l--------------------  702 (829)
                      ++|+.++++||.+++.+.+.|+...+.            +|+-+...        +..+.                    
T Consensus        90 sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~l~~~~  169 (222)
T cd07018          90 QGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQALLDSLW  169 (222)
T ss_pred             chhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHHHHHHH
Confidence            999999999999999999998885432            23322110        00111                    


Q ss_pred             ---------ccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHH
Q psy11396        703 ---------PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFY  744 (829)
Q Consensus       703 ---------~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~  744 (829)
                               .|.+...... -+..|+.|++++|++.||||++...+++.+.
T Consensus       170 ~~f~~~Va~~R~~~~~~~~-~~~~~~~~~~~~A~~~GLvD~i~~~~e~~~~  219 (222)
T cd07018         170 DQYLADVAASRGLSPDALE-ALIDLGGDSAEEALEAGLVDGLAYRDELEAR  219 (222)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHcCCcHHHHHHHCCCCCcCCcHHHHHHH
Confidence                     0111122222 2455899999999999999999977776554

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys

>PLN02932 3-ketoacyl-CoA synthase

Probab=98.67  E-value=2.2e-07  Score=105.19  Aligned_cols=198  Identities=13%  Similarity=0.137  Sum_probs=125.1

Q ss_pred             CCCEEEEecccccCCC---CCHHHHHHHHHcCCC--ceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcC
Q psy11396        114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRN--CVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLF  188 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~  188 (829)
                      +++|+.+-++|.-|..   .+.+.|-+....-+.  .+.+-..+-.   +|.        ..+..+.|. .+-..+.+..
T Consensus        65 ~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~--------~~i~~rsGi-g~~t~~p~~~  132 (478)
T PLN02932         65 PKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLM---DFC--------EKILERSGL-GQETYIPEGL  132 (478)
T ss_pred             CCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHH---HHH--------HHHHHHcCC-CCceeecccc
Confidence            4789999999999984   477888776643321  1211100000   000        000000110 1101111222


Q ss_pred             CCCCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhH
Q psy11396        189 FNISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       189 f~i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      ..+++.  ......-...++..|+.+||+++|+++++|+    -+++.++.+.                   ....++.+
T Consensus       133 ~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId----~lIv~tst~~-------------------~~Pslaa~  189 (478)
T PLN02932        133 QCLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIG----ILVVNSSTFN-------------------PTPSLSSI  189 (478)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCC-------------------CCCcHHHH
Confidence            223333  3333344567999999999999999999997    7777765421                   23456788


Q ss_pred             hhhhccCC--Ccceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC
Q psy11396        267 VSYFLNLQ--GPCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN  343 (829)
Q Consensus       267 ia~~lgl~--Gp~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~  343 (829)
                      |...||++  -.++.++ .||++++.||..|.++|++|....|||+++|.++.....            +..+  +..-.
T Consensus       190 V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~------------~d~r--~~l~t  255 (478)
T PLN02932        190 LVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYL------------GNNK--SMLVT  255 (478)
T ss_pred             HHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCC------------Ccch--hhhcc
Confidence            99999996  3788898 899999999999999999999999999999986432210            0000  00123


Q ss_pred             CcccccceEEEEEccch
Q psy11396        344 GFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       344 G~~~gEGaaalvL~~~~  360 (829)
                      .+.+||||||+||++.+
T Consensus       256 ~~LFgDGAAAvlLs~~~  272 (478)
T PLN02932        256 NCLFRIGGAAILLSNRS  272 (478)
T ss_pred             ceeecccceEEEEeccc
Confidence            57789999999999754

>PLN02192 3-ketoacyl-CoA synthase

Probab=98.50  E-value=5.8e-07  Score=102.16  Aligned_cols=189  Identities=16%  Similarity=0.191  Sum_probs=120.6

Q ss_pred             CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      +++|+.+-++|.-|..   .+.+.|-+....-.    .+..           +.-.+-.......|. .+-..+.+..+.
T Consensus        99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~f~~~~~~~sgl-g~~t~~p~~~~~  162 (511)
T PLN02192         99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTG----SFTE-----------ENLEFQRKILERSGL-GESTYLPEAVLN  162 (511)
T ss_pred             CCcEEEEeeeeecCCccccccHHHHHHHHHHcC----CCCH-----------HHHHHHHHHHHhcCC-CCcccCChhhcc
Confidence            4689999999999984   56777776665331    1110           000000000111111 111223333333


Q ss_pred             CCHHH--hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396        191 ISPSE--AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS  268 (829)
Q Consensus       191 i~p~~--~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  268 (829)
                      ++|..  .....-...++..|+.+||+++|+++++|+    -+++.++ .++                  ....++..|.
T Consensus       163 ~~~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DID----iLIv~~S-~~~------------------~~PSlaa~I~  219 (511)
T PLN02192        163 VPPNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIG----ILIVNCS-LFN------------------PTPSLSAMVI  219 (511)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC-CCC------------------CCchHHHHHH
Confidence            33332  122233557889999999999999999997    5555533 221                  1234678899


Q ss_pred             hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCC-
Q psy11396        269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANG-  344 (829)
Q Consensus       269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G-  344 (829)
                      ..+|++.  +++.++ .||++++.||..|.++|+++....+||+++|.++..+ +                 +..++.- 
T Consensus       220 n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~-y-----------------~g~drs~l  281 (511)
T PLN02192        220 NHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNW-Y-----------------FGNDRSML  281 (511)
T ss_pred             HHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccC-C-----------------CCCCHHHH
Confidence            9999974  788999 6999999999999999999999999999999865111 0                 0111211 


Q ss_pred             ---cccccceEEEEEccc
Q psy11396        345 ---FVPGEGVGVLMLKKL  359 (829)
Q Consensus       345 ---~~~gEGaaalvL~~~  359 (829)
                         +.+||||||+||++.
T Consensus       282 v~n~LFgDGAaAvLLs~~  299 (511)
T PLN02192        282 VSNCLFRMGGAAILLSNK  299 (511)
T ss_pred             hccccccccceEEEEecc
Confidence               467999999999874

>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=98.49  E-value=1.3e-07  Score=93.79  Aligned_cols=133  Identities=15%  Similarity=0.151  Sum_probs=88.5

Q ss_pred             cccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhh
Q psy11396        589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAM  668 (829)
Q Consensus       589 ~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~l  668 (829)
                      ....|...++.+++++ +..||+.    .=|.|+++.......            ..+..+++|+|+.|+|.|.++|+.+
T Consensus        14 ~~~~l~~~l~~a~~~~-~~~ivl~----inspGG~v~~~~~I~------------~~l~~~~~pvva~V~g~AaSaG~~i   76 (178)
T cd07021          14 LAAFVERALKEAKEEG-ADAVVLD----IDTPGGRVDSALEIV------------DLILNSPIPTIAYVNDRAASAGALI   76 (178)
T ss_pred             HHHHHHHHHHHHHhCC-CCeEEEE----EECcCCCHHHHHHHH------------HHHHhCCCCEEEEECCchHHHHHHH
Confidence            3445666777777765 5666664    224455554443222            2334478999999999999999999


Q ss_pred             hhccccccccccceeccccccccccCCCcce--------ec------ccccc--CHHHHHHHHhcC-------------C
Q psy11396        669 GLFCDYTIFSEESVYQSPYMRYGFTPGAGST--------LI------FPQRF--GKILSREILFTA-------------S  719 (829)
Q Consensus       669 al~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~--------~~------l~r~i--G~~~a~e~ll~g-------------~  719 (829)
                      +++||++++++++.|+.++.-.    ..+..        ..      ++++-  ....+..|+-..             -
T Consensus        77 a~a~d~i~m~p~a~iG~~~~v~----~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~v~~~~~~~~~~l  152 (178)
T cd07021          77 ALAADEIYMAPGATIGAAEPIP----GDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIEVPGVGIKGGELL  152 (178)
T ss_pred             HHhCCeEEECCCCeEecCeeEc----CCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhccccccccccccee
Confidence            9999999999999999985542    22220        01      11111  244555555544             2


Q ss_pred             ccCHHHHHHcCCcccccC-hhhHH
Q psy11396        720 EFKGKELKERGISMPVLP-RKQVL  742 (829)
Q Consensus       720 ~~~a~eA~~~GLv~~v~~-~~~l~  742 (829)
                      .+|++||+++|++|.+.+ .++|.
T Consensus       153 ~lta~eA~~~g~~d~ia~~~~~ll  176 (178)
T cd07021         153 TLTADEALKVGYAEGIAGSLDELL  176 (178)
T ss_pred             eeCHHHHHHhCCeEEEECCHHHHh
Confidence            699999999999999986 34443

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=98.44  E-value=7.9e-07  Score=90.38  Aligned_cols=117  Identities=14%  Similarity=0.125  Sum_probs=101.8

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc------cCccccchhhhccccccchh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI------TDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~a  264 (829)
                      |+|.+.|+|++..||+++++.+++++.    .+++    .+|+++..|+.....      ...+.++|..|.++++|+++
T Consensus        23 lp~m~rRRls~~~rla~~~a~~~~~~~----~~~d----~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~a   94 (218)
T PF13723_consen   23 LPPMQRRRLSRLSRLALEAALECLAED----EQPD----AIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAA   94 (218)
T ss_pred             CCHHHHcccCHHHHHHHHHHHHHHhcc----CCCC----cEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHH
Confidence            899999999999999999999999653    2333    788888888764322      23456899999999999999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT  316 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~  316 (829)
                      +++++..+.++|+.++..+-.|...||..|+..+..| ++.||++.+|....
T Consensus        95 G~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p  145 (218)
T PF13723_consen   95 GYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP  145 (218)
T ss_pred             HHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence            9999999999999999999999999999999999999 99999999998653

>PRK06060 acyl-CoA synthetase; Validated

Probab=98.39  E-value=1.9e-07  Score=113.89  Aligned_cols=77  Identities=6%  Similarity=0.001  Sum_probs=72.1

Q ss_pred             chhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         24 NDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      .+++...+.+.|+.+++.||||++++.|++++.|. |+|| |||+++|||+||++.+|++||.+..|++||+.+++.+.
T Consensus       539 ~~~~~~~~~~~v~~~~a~vl~~~~~~~i~~~~~f~-~lG~-dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l  615 (705)
T PRK06060        539 RQERQRLVVDAVCAEAAKMLGEPDPWSVDQDLAFS-ELGF-DSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYL  615 (705)
T ss_pred             cHHHHHHHHHHHHHHHHHHhCCCChhhCCCCCChh-hcCc-hHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHH
Confidence            36778888899999999999999999999999999 9999 99999999999999999999999999999998887764

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=98.15  E-value=1.5e-05  Score=83.64  Aligned_cols=195  Identities=15%  Similarity=0.165  Sum_probs=123.5

Q ss_pred             CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      +++|+.+-+.|.-|..   .+.+.|++....-.. +.+-. -+|     .       -+ +....|.- +-..+.+..+.
T Consensus         6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~~s-l~F-----~-------~k-IlerSGlG-~eTy~P~~~~~   69 (290)
T PF08392_consen    6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDEES-LDF-----Q-------RK-ILERSGLG-DETYLPPALHE   69 (290)
T ss_pred             CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CChhH-HHH-----H-------HH-HHHhcCCC-ccccCCccccc
Confidence            4689999999999984   588999987765321 11100 000     0       00 11111111 11112222233


Q ss_pred             CCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396        191 ISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS  268 (829)
Q Consensus       191 i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  268 (829)
                      ++|.  ..+..+-...++..++.++|+.+|+.|.+|+    .+++.++..                   ...+.++..|.
T Consensus        70 ~p~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dId----iLVvncs~f-------------------~ptPSLsamIv  126 (290)
T PF08392_consen   70 IPPDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDID----ILVVNCSLF-------------------NPTPSLSAMIV  126 (290)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECcCC-------------------CcCCcHHHHHH
Confidence            3333  1122233445788899999999999999998    666665431                   11235678899


Q ss_pred             hhccCCCccee---eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q psy11396        269 YFLNLQGPCLA---IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGF  345 (829)
Q Consensus       269 ~~lgl~Gp~~t---v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~  345 (829)
                      ..||++.-..+   ...||++|+.+|..|.++++.-.-..|||+.+|.++..+ +.+-++..++             ..+
T Consensus       127 nr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~-Y~G~~rsmlv-------------~Nc  192 (290)
T PF08392_consen  127 NRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISANW-YRGNDRSMLV-------------SNC  192 (290)
T ss_pred             HHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeeccccc-ccCCcHHHhh-------------ccc
Confidence            99999864444   467899999999999999999999999999999875432 1111111111             236


Q ss_pred             ccccceEEEEEccchh
Q psy11396        346 VPGEGVGVLMLKKLKD  361 (829)
Q Consensus       346 ~~gEGaaalvL~~~~~  361 (829)
                      .+.+|++|++|.+...
T Consensus       193 LFr~GgAAvLLSn~~~  208 (290)
T PF08392_consen  193 LFRMGGAAVLLSNKPS  208 (290)
T ss_pred             cccCCceeEEeecCcc
Confidence            6889999999997655

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PLN00415 3-ketoacyl-CoA synthase

Probab=98.12  E-value=1.9e-05  Score=88.49  Aligned_cols=120  Identities=13%  Similarity=0.140  Sum_probs=85.0

Q ss_pred             HHHHHHH-HHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cce
Q psy11396        202 QQRLFLQ-NCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCL  278 (829)
Q Consensus       202 ~~~l~l~-aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~  278 (829)
                      ...|++. |+.+||+++|+++++|+    -+++.+ .+.+                  .....+.++...+|++.  ..+
T Consensus       133 e~em~i~~A~~~aL~~aGi~p~dID----~LIvs~-T~~~------------------~~Pslaa~l~~~LGLr~~v~~~  189 (466)
T PLN00415        133 ESELVIFGALNSLFKKTGIEPREVG----IFIVNC-SLFN------------------PNPSLSSMIVNRYKLKTDVKTY  189 (466)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEC-cCCC------------------CCchHHHHHHHHhCCCCCceEE
Confidence            4445555 77788899999999987    444432 2211                  12345678889999972  567


Q ss_pred             eecc-chhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC--CCcccccceEEEE
Q psy11396        279 AIDT-ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA--NGFVPGEGVGVLM  355 (829)
Q Consensus       279 tv~~-acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~--~G~~~gEGaaalv  355 (829)
                      .|+. ||++++.+|..|.++++++....+||.++|.++....          .      +-|...  ..+.+||||+|+|
T Consensus       190 dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~----------~------~~dr~~lv~n~LFgDGAAAvl  253 (466)
T PLN00415        190 NLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMY----------R------GNDRSMLVPNCLFRVGGAAVM  253 (466)
T ss_pred             EeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccccccc----------C------CCcHhHhccceeecccceEEE
Confidence            7887 9999999999999999999999999999998542210          0      001000  1256899999999


Q ss_pred             Eccch
Q psy11396        356 LKKLK  360 (829)
Q Consensus       356 L~~~~  360 (829)
                      |++..
T Consensus       254 Ls~~~  258 (466)
T PLN00415        254 LSNRS  258 (466)
T ss_pred             EecCc
Confidence            99743

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.05  E-value=2.6e-05  Score=80.65  Aligned_cols=186  Identities=18%  Similarity=0.208  Sum_probs=124.2

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc-
Q psy11396        199 MDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC-  277 (829)
Q Consensus       199 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~-  277 (829)
                      +.....+.+++.++||+.+++.+++++    .|++.++.+                   .....+-.+|...|||.-.. 
T Consensus        73 ie~a~~l~v~a~r~aL~~~~l~pedId----~vv~vtsTG-------------------~~~Ps~dari~~~Lgl~p~~~  129 (356)
T COG3424          73 IEEAVPLGVDALRRALDGSPLRPEDID----AVVTVTSTG-------------------LATPSLDARIVGELGLSPDTR  129 (356)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCHHHCc----EEEEEeecc-------------------ccCCChhHHHHhhcCCCCccc
Confidence            344567899999999999999999998    555554432                   11222345788888885322 


Q ss_pred             --eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC----C-cccccc
Q psy11396        278 --LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN----G-FVPGEG  350 (829)
Q Consensus       278 --~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~----G-~~~gEG  350 (829)
                        -.-.-||+.|..++..|.+..+......+||+.+|.++-..                  ++..+.+    | ..+|||
T Consensus       130 Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~------------------~~~d~t~s~lVgtaLF~DG  191 (356)
T COG3424         130 RVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTY------------------VFADDTKSNLVGTALFGDG  191 (356)
T ss_pred             eeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeee------------------ecCCCCcccceeeeeecCC
Confidence              12467999999999999999999999999999999875221                  1111222    1 457999


Q ss_pred             eEEEEEccchhhhhCCCceEE-E--------------EEEeeeecCCCCCC--CCCCC--HHHHHHHHHHHHHHcCCCCC
Q psy11396        351 VGVLMLKKLKDAKKDGDDIYC-I--------------IKGWGVNQDGKTNG--ITAPN--TKSQIRLQTKIYKKFNINPN  411 (829)
Q Consensus       351 aaalvL~~~~~A~~~g~~i~a-~--------------I~g~~~~~dg~~~~--~~~p~--~~~~~~ai~~Al~~Agl~~~  411 (829)
                      ++|+|+.-...+.  +..+.. .              +-||.++..|....  ...|+  ...+...+...|...+++.+
T Consensus       192 ~AA~vv~gd~~~~--~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~  269 (356)
T COG3424         192 AAAVVVSGDRRAE--GKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIE  269 (356)
T ss_pred             eeEEEEecccccc--ccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchh
Confidence            9999998633322  111111 1              33455555553321  11222  34567788899999999999


Q ss_pred             CccEEEecCCCCCCCC
Q psy11396        412 DIQLLEAHGTGTKLGD  427 (829)
Q Consensus       412 dId~ve~hgtgt~~gD  427 (829)
                      ||+.+-.|=-|-+.-|
T Consensus       270 dI~~w~~HPGG~KVid  285 (356)
T COG3424         270 DIEAWVVHPGGPKVID  285 (356)
T ss_pred             hhceeeeCCCCchHHH
Confidence            9999999955554433

>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []

Probab=97.98  E-value=3.4e-06  Score=69.44  Aligned_cols=64  Identities=6%  Similarity=0.114  Sum_probs=57.3

Q ss_pred             hhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         34 NNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      -+++.++.+|| .+++.++++..|. ++|+ ||+.+++|.++|++.+|+.++....|++||...++.
T Consensus         2 ~l~~~~~~~l~-~~~~~i~~~~~~~-~lG~-DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~   65 (67)
T PF00550_consen    2 QLREIIAEVLG-VDPEEIDPDTDFF-DLGL-DSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAE   65 (67)
T ss_dssp             HHHHHHHHHHT-SSGGCTSTTSBTT-TTTS-SHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHH
T ss_pred             HHHHHHHHHHC-cCHhhCCCCCCHH-HhCC-chHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHh
Confidence            36778888998 5678999999999 9999 999999999999999999999999999999876653

The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....

>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=97.92  E-value=1.3e-05  Score=78.48  Aligned_cols=133  Identities=12%  Similarity=0.097  Sum_probs=80.5

Q ss_pred             ccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchh
Q psy11396        586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAG  665 (829)
Q Consensus       586 ~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG  665 (829)
                      ++.+..++...|..++.++..+.|+|.    .=|.|+++..-....+            .+..+++|+++.+.|.|.++|
T Consensus        10 ~~~~~~~~~~~L~~l~~~~~~~~i~l~----InSpGG~v~~~~~i~~------------~i~~~~~~v~~~~~g~aaS~~   73 (162)
T cd07013          10 EDISANQFAAQLLFLGAVNPEKDIYLY----INSPGGDVFAGMAIYD------------TIKFIKADVVTIIDGLAASMG   73 (162)
T ss_pred             CcHHHHHHHHHHHHHhcCCCCCCEEEE----EECCCCcHHHHHHHHH------------HHHhcCCCceEEEEeehhhHH
Confidence            445566667777777776655555553    2244555533322221            222367789999999999999


Q ss_pred             hhhhhccc--cccccccceeccccccccccCCCcc----------------eeccccc--cCHHHHHHHHhcCCccCHHH
Q psy11396        666 WAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQR--FGKILSREILFTASEFKGKE  725 (829)
Q Consensus       666 ~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~--iG~~~a~e~ll~g~~~~a~e  725 (829)
                      ..++++||  .|++.++++|++....-+. -+...                ...+.+.  .......+++-.+..++++|
T Consensus        74 ~~i~~a~~~g~r~~~p~a~~~ih~~~~~~-~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~e  152 (162)
T cd07013          74 SVIAMAGAKGKRFILPNAMMMIHQPWGGT-LGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERDTWLSARE  152 (162)
T ss_pred             HHHHHcCCCCcEEEecCEEEEEccCcccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCccccHHH
Confidence            99999999  5677667766653322111 00000                0011111  12445556666667779999


Q ss_pred             HHHcCCcccc
Q psy11396        726 LKERGISMPV  735 (829)
Q Consensus       726 A~~~GLv~~v  735 (829)
                      |+++||||++
T Consensus       153 A~~~GliD~i  162 (162)
T cd07013         153 AVEYGFADTI  162 (162)
T ss_pred             HHHcCCCCcC
Confidence            9999999985

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas

>KOG1683|consensus

Probab=97.85  E-value=6.1e-07  Score=95.27  Aligned_cols=227  Identities=10%  Similarity=0.005  Sum_probs=143.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccccc---cccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFTD---EKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~kp~Iaa  656 (829)
                      .-|-.|.++.++|..-++.+..+..+++...|+.. +.|++|.|..++.........-..   ...+.....++.|+.++
T Consensus        75 eav~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h~fspa~~m~LlEii~~~~tS~~~iA~A  154 (380)
T KOG1683|consen   75 EAVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMHFFSPAHWMQLLEIILALYTSKLTIATA  154 (380)
T ss_pred             cchhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhccccccCHHHHHHHHHHHHhcCCCchHHHHH
Confidence            33444566677777778888888888999998885 899999999887644332221111   12234444599999999


Q ss_pred             ecccccchh--hhhhhcccccccccc--ceeccccccccc-cCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCC
Q psy11396        657 MQGHAIGAG--WAMGLFCDYTIFSEE--SVYQSPYMRYGF-TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI  731 (829)
Q Consensus       657 v~G~a~GgG--~~lal~cD~~ia~~~--a~f~~~e~~~Gl-~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GL  731 (829)
                      +||++-.++  +.++-+|+|++...-  -..+..+..+++ .|++- .-.+...+|.+.+-..+--+.-|+..||++-|+
T Consensus       155 in~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~-iD~~~t~fGf~~g~~~L~d~~gfdv~eal~~gl  233 (380)
T KOG1683|consen  155 INGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWL-IDSLITKFGFRVGERALADGVGFDVAEALAVGL  233 (380)
T ss_pred             HhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHH-HHHHHHhcCccccHHHHhhccCccHHHHHhhcc
Confidence            999999999  778999999998743  344678888773 33332 223444556666666677788999999999999


Q ss_pred             cccccCh--hhHHHHHHHHHHHHhcCCHHHHHHHHHHHH--------hhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHH
Q psy11396        732 SMPVLPR--KQVLFYSLKLAKKLSLLSKKELELQKKYYS--------HSLQKKLSTIFLHELTMHDYTFVNNPSVITNIE  801 (829)
Q Consensus       732 v~~v~~~--~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~--------~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~  801 (829)
                      ++++.|+  +++.+....-........+.+-..+|+..+        +-. ...... ....+-+.... ..|-++|+++
T Consensus       234 ~~~~~~r~~eel~~~~~~g~kT~kg~y~y~~~l~k~~~~~~~~~~~r~l~-~~~~~r-~~~~ed~v~~~-~~p~VnEal~  310 (380)
T KOG1683|consen  234 GDEIGPRIEEELLEKGRAGIKTGKGIYPYARGLTKKMKRDEMEALLRRLS-LTPNPR-VADDEDFVEFL-LSPFVNEALR  310 (380)
T ss_pred             chhccchhHHHHHHHHhhhhhccCcccccccccccCCChhhHHHHHHHhc-cCCCcc-cCCHHHHHHHH-hhHHHHHHHH
Confidence            9999984  555555444444433333333222222222        111 000000 01112223333 5789999999


Q ss_pred             HHHhhccccC
Q psy11396        802 RYFDKSIKKN  811 (829)
Q Consensus       802 ~~~~k~~~~~  811 (829)
                      -|.|.-++++
T Consensus       311 ~l~EGi~~~~  320 (380)
T KOG1683|consen  311 CLLEGLKASP  320 (380)
T ss_pred             HHHHHHhcCc
Confidence            9999875444

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=97.85  E-value=1.1e-05  Score=69.19  Aligned_cols=64  Identities=25%  Similarity=0.349  Sum_probs=48.2

Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLK  357 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~  357 (829)
                      |-|+.+|++++.||..|..+|++|.++.+|+++.|........                  ......+++||||+|+||+
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~------------------~~~~~~~~~gDgAaA~vl~   62 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDR------------------TDRQTAFIFGDGAAAVVLS   62 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHT------------------THHHHHTTB-EEEEEEEEE
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccc------------------cccCcceeecchheEEEEE
Confidence            4578999999999999999999999999999999986431110                  0112335789999999999


Q ss_pred             cc
Q psy11396        358 KL  359 (829)
Q Consensus       358 ~~  359 (829)
                      +.
T Consensus        63 ~~   64 (80)
T PF08545_consen   63 RD   64 (80)
T ss_dssp             EE
T ss_pred             ec
Confidence            86

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=97.83  E-value=2.4e-05  Score=76.76  Aligned_cols=135  Identities=17%  Similarity=0.186  Sum_probs=90.0

Q ss_pred             cccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEec---ccccchhhh
Q psy11396        591 KGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQ---GHAIGAGWA  667 (829)
Q Consensus       591 ~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~---G~a~GgG~~  667 (829)
                      .-|...++.++++ ..+.|+|.    .=|.|+.+.......+            .+...++||++.|.   |.|..+|..
T Consensus        16 ~~l~~~l~~A~~~-~~~~i~l~----inSPGG~v~~~~~I~~------------~i~~~~~pvv~~v~p~g~~AaSag~~   78 (172)
T cd07015          16 DQFDRYITIAEQD-NAEAIIIE----LDTPGGRADAAGNIVQ------------RIQQSKIPVIIYVYPPGASAASAGTY   78 (172)
T ss_pred             HHHHHHHHHHhcC-CCCeEEEE----EECCCCCHHHHHHHHH------------HHHhcCcCEEEEEecCCCeehhHHHH
Confidence            3445566666654 45666664    2345566654432221            22336899999999   999999999


Q ss_pred             hhhccccccccccceeccccccccccCCCcc--------eec------cccccC--HHHHHHHHhcCCccCHHHHHHcCC
Q psy11396        668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGS--------TLI------FPQRFG--KILSREILFTASEFKGKELKERGI  731 (829)
Q Consensus       668 lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~--------~~~------l~r~iG--~~~a~e~ll~g~~~~a~eA~~~GL  731 (829)
                      ++++||.+++.+++.++......+..+....        ...      +++.-|  ...+.+++.....++++||+++|+
T Consensus        79 I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~~~lta~EA~~~G~  158 (172)
T cd07015          79 IALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGV  158 (172)
T ss_pred             HHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhhcCcCHHHHHHcCC
Confidence            9999999999999999988875432120000        001      111112  456777777788899999999999


Q ss_pred             cccccCh-hhHH
Q psy11396        732 SMPVLPR-KQVL  742 (829)
Q Consensus       732 v~~v~~~-~~l~  742 (829)
                      +|.|+.. ++|.
T Consensus       159 iD~ia~~~~~ll  170 (172)
T cd07015         159 IEVVARDINELL  170 (172)
T ss_pred             ceeeeCCHHHHh
Confidence            9999964 4443

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle

>PRK10949 protease 4; Provisional

Probab=97.70  E-value=6.3e-05  Score=88.45  Aligned_cols=142  Identities=14%  Similarity=0.144  Sum_probs=90.3

Q ss_pred             ccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhhhhc
Q psy11396        592 GITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLF  671 (829)
Q Consensus       592 eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~  671 (829)
                      .+...++.+.+|+++++||+.=.    |.|+............         .......||+||.+.+.|.-||..++++
T Consensus       351 ~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~ase~i~~~i---------~~~r~~gKPVvas~~~~aASggY~iA~a  417 (618)
T PRK10949        351 TTAAQIRDARLDPKVKAIVLRVN----SPGGSVTASEVIRAEL---------AAARAAGKPVVVSMGGMAASGGYWISTP  417 (618)
T ss_pred             HHHHHHHHHHhCCCCcEEEEEec----CCCCcHHHHHHHHHHH---------HHHHhcCCcEEEEECCCCccHHHHHHHh
Confidence            45667888999999999999743    3344432222221111         1112357999999999999999999999


Q ss_pred             cccccccccceeccccc------------cccccCCCcceecc----------------------------------ccc
Q psy11396        672 CDYTIFSEESVYQSPYM------------RYGFTPGAGSTLIF----------------------------------PQR  705 (829)
Q Consensus       672 cD~~ia~~~a~f~~~e~------------~~Gl~p~~g~~~~l----------------------------------~r~  705 (829)
                      ||.+++.+.+..+...+            ++|+.+....+-.+                                  .|.
T Consensus       418 ad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~  497 (618)
T PRK10949        418 ANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSITKALPPEFQQMMQLSIENGYKRFITLVADSRH  497 (618)
T ss_pred             cCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            99999999766444222            23443322111111                                  011


Q ss_pred             cCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHH
Q psy11396        706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLK  747 (829)
Q Consensus       706 iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~  747 (829)
                      +..... +-+..|+.|++++|++.||||++-.-++..+.+.+
T Consensus       498 ~~~~~v-~~ia~Grv~tg~~A~~~GLVD~lG~~~~ai~~a~~  538 (618)
T PRK10949        498 KTPEQI-DKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAE  538 (618)
T ss_pred             CCHHHH-HHHhcCCcccHHHHHHcCCCccCCCHHHHHHHHHH
Confidence            222222 23578999999999999999999765554444433

>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=97.69  E-value=7.3e-05  Score=75.78  Aligned_cols=134  Identities=17%  Similarity=0.121  Sum_probs=79.6

Q ss_pred             cCCcccccccccccchhhhcccccce--eeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYK--VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..+++..+.+.+...+..++.+...+  .+.|.      |.|+++..-....+            .+...+.|+++.+.|
T Consensus        37 ~g~I~~~~~~~i~~~L~~l~~~~~~~~I~l~In------SpGG~v~~g~~I~d------------~i~~~~~~v~t~~~G   98 (200)
T PRK00277         37 GGEVEDHMANLIVAQLLFLEAEDPDKDIYLYIN------SPGGSVTAGLAIYD------------TMQFIKPDVSTICIG   98 (200)
T ss_pred             CCEECHHHHHHHHHHHHHhhccCCCCCEEEEEE------CCCCcHHHHHHHHH------------HHHhcCCCEEEEEEe
Confidence            34556666777777777666543222  23334      34455544332222            122256789999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcce----------------------eccccccC--HHHHHHHH
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST----------------------LIFPQRFG--KILSREIL  715 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~----------------------~~l~r~iG--~~~a~e~l  715 (829)
                      .|.++|..++++++     ++.++++|+.++++.++.+++                      ..+..+-|  .....+++
T Consensus        99 ~aaS~a~~I~~ag~-----~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~  173 (200)
T PRK00277         99 QAASMGAFLLAAGA-----KGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDT  173 (200)
T ss_pred             EeccHHHHHHhcCC-----CCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence            99999998887732     333444444444444333221                      11222223  45555666


Q ss_pred             hcCCccCHHHHHHcCCcccccCh
Q psy11396        716 FTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       716 l~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      -....++|+||+++||||+|+..
T Consensus       174 ~~~~~lsa~EA~e~GliD~Ii~~  196 (200)
T PRK00277        174 DRDNFMSAEEAKEYGLIDEVLTK  196 (200)
T ss_pred             hCCccccHHHHHHcCCccEEeec
Confidence            66778999999999999999863

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=97.59  E-value=0.0016  Score=68.17  Aligned_cols=174  Identities=18%  Similarity=0.200  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID  281 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  281 (829)
                      +++|..+|+..||+.||+.+++++    -++-|    |.               .+  ..+.++..+..|++  |-+=+-
T Consensus        51 E~~m~~~A~~~al~Ka~l~~~dId----~~~aG----DL---------------ln--Q~i~s~f~ar~l~i--Pf~Gly  103 (329)
T PF07451_consen   51 ESKMQKEAVELALKKAGLKKEDID----YLFAG----DL---------------LN--QIISSSFAARDLGI--PFLGLY  103 (329)
T ss_dssp             HHHHHHHHHHHHHHHTT--GGG-S----EEEEE----ET---------------TC--CCCHHHHHHHHHT----EEEB-
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCe----EEEeh----hh---------------hh--hhHHHHHHHHhcCC--Cccchh
Confidence            568999999999999999998887    34443    11               11  12234445555555  888899


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD  361 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~  361 (829)
                      .+||+...+|.+|+.+|..|-++.++++-.....+.....     +.-...+.-||...    ...--|+|++||.+...
T Consensus       104 gACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQf-----R~P~EyG~Qrp~tA----qwTVTGaGa~il~~~~~  174 (329)
T PF07451_consen  104 GACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQF-----RFPTEYGGQRPPTA----QWTVTGAGAAILSKEGS  174 (329)
T ss_dssp             -CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------GGGT----TT------EE--EEEEEEEESS--
T ss_pred             hHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhc-----cCchhccCCCCCcc----cEEEeceEEEEEecCCC
Confidence            9999999999999999999999999999887654433221     11112233343221    12235788999986432


Q ss_pred             hhhCCCceEEEEEEeeeecCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        362 AKKDGDDIYCIIKGWGVNQDGKTNGITAPN------TKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       362 A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~------~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                            .|+  |.+..+.-- -..+..+|+      .++....|.+-|++.|.+|+|-|.|..-+
T Consensus       175 ------~p~--It~~T~GkV-vD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGD  230 (329)
T PF07451_consen  175 ------GPR--ITHATIGKV-VDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGD  230 (329)
T ss_dssp             ------SEE--EEEEE-----B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS
T ss_pred             ------CcE--EEEEEEEEE-EEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecc
Confidence                  333  333221100 112344555      33456778888999999999999999753

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=97.57  E-value=0.00017  Score=73.74  Aligned_cols=124  Identities=15%  Similarity=0.162  Sum_probs=84.0

Q ss_pred             hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC
Q psy11396        196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG  275 (829)
Q Consensus       196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  275 (829)
                      ..+..-...|+.+|+.+||+++|+++.+|+    .+|+-++.+-                   ....+-.++...|||+.
T Consensus        94 ~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIt----hlv~vs~TG~-------------------~~PglD~~l~~~LgL~~  150 (226)
T PF00195_consen   94 ALYAEEAPPLAEEAARKALAEAGLDPSDIT----HLVTVSCTGI-------------------AAPGLDARLINRLGLRP  150 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTS-GGGEC----EEEEEESSSS-------------------ECS-HHHHHHHHHT--T
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCcccc----eEEEEecCCc-------------------CCCchhHHHHhcCCCCC
Confidence            334445567999999999999999998887    6666554431                   22334567889999974


Q ss_pred             cc---eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC----Ccccc
Q psy11396        276 PC---LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN----GFVPG  348 (829)
Q Consensus       276 p~---~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~----G~~~g  348 (829)
                      ..   .....||..|..+|..|....++..-..|||..+|.++-....                |.+.+.+    ...+|
T Consensus       151 ~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~----------------~~~~~~~~lv~~aLFg  214 (226)
T PF00195_consen  151 DVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCSLHFQA----------------PNDDSLDNLVANALFG  214 (226)
T ss_dssp             TSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHH----------------CCTTSHHHHHHHHHB-
T ss_pred             CcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeEEEEec----------------CCcccHHHHhHHhhhc
Confidence            32   3467899999999999999999999999999999987532210                1111111    14589


Q ss_pred             cceEEEEEcc
Q psy11396        349 EGVGVLMLKK  358 (829)
Q Consensus       349 EGaaalvL~~  358 (829)
                      |||+|+||..
T Consensus       215 DGaAA~vv~~  224 (226)
T PF00195_consen  215 DGAAAVVVGA  224 (226)
T ss_dssp             EEEEEEEEES
T ss_pred             CCceEEEEcc
Confidence            9999999864

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional

Probab=97.52  E-value=0.00025  Score=74.11  Aligned_cols=82  Identities=21%  Similarity=0.288  Sum_probs=58.4

Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      ...+.|+|++|-|.|.|||......||++++.+++.++.-      .|.++....+...--...+.+.    ..+++.++
T Consensus       133 s~~~VP~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v~------~pe~~a~il~~~~~~a~~aa~~----~~~~a~~l  202 (256)
T PRK12319        133 SDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAVL------SPEGFASILWKDGSRATEAAEL----MKITAGEL  202 (256)
T ss_pred             hCCCCCEEEEEeCCcCcHHHHHhhcCCEEEEecCceEEEc------CHHHHHHHHhcCcccHHHHHHH----cCCCHHHH
Confidence            3478999999999999998887789999999998876542      2333332222222122333333    37799999


Q ss_pred             HHcCCcccccCh
Q psy11396        727 KERGISMPVLPR  738 (829)
Q Consensus       727 ~~~GLv~~v~~~  738 (829)
                      ++.|+||+|+|.
T Consensus       203 ~~~g~iD~ii~e  214 (256)
T PRK12319        203 LEMGVVDKVIPE  214 (256)
T ss_pred             HHCCCCcEecCC
Confidence            999999999974

>PRK00982 acpP acyl carrier protein; Provisional

Probab=97.52  E-value=3.4e-05  Score=65.70  Aligned_cols=70  Identities=11%  Similarity=0.116  Sum_probs=60.4

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+++.+++.++.++|.+ ++.++++..|..++|+ ||+..++|..+|++.+|+.+|+...++.+|...++.+
T Consensus         3 ~i~~~l~~~l~~~l~~~-~~~i~~d~~l~~dlgl-DSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~   72 (78)
T PRK00982          3 EIFEKVKKIIVEQLGVD-EEEVTPEASFVDDLGA-DSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDY   72 (78)
T ss_pred             HHHHHHHHHHHHHHCCC-HHHCCCCcchHhhcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHH
Confidence            36777888899999986 7789999999559999 9999999999999999999999987888877665543

>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional

Probab=97.38  E-value=0.00045  Score=73.83  Aligned_cols=80  Identities=23%  Similarity=0.290  Sum_probs=59.0

Q ss_pred             cCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      ....|+|++|-|.|.|||.-....||++++.++++++.      +.|.++++..+...   .++.++ ...-++|+++.+
T Consensus       190 ~~~VP~IsVViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~Il~~d~---~~a~~a-A~~~~ita~dL~  259 (322)
T CHL00198        190 SFEVPIICTIIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAILWKDS---KKSLDA-AEALKITSEDLK  259 (322)
T ss_pred             cCCCCEEEEEeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHHHhcch---hhHHHH-HHHcCCCHHHHH
Confidence            47899999999999888876555699999999987654      23444444433332   344433 334689999999


Q ss_pred             HcCCcccccC
Q psy11396        728 ERGISMPVLP  737 (829)
Q Consensus       728 ~~GLv~~v~~  737 (829)
                      ++|+||+|+|
T Consensus       260 ~~giiD~ii~  269 (322)
T CHL00198        260 VLGIIDEIIP  269 (322)
T ss_pred             hCCCCeEecc
Confidence            9999999997

>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional

Probab=97.35  E-value=0.00054  Score=74.95  Aligned_cols=81  Identities=20%  Similarity=0.281  Sum_probs=58.5

Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      .....|+|++|-|.+.+||.....+||+++|.+++.++.      +.|.++++..+....-...+.+    .-.+|++++
T Consensus       256 s~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~eAAe----alkitA~dL  325 (431)
T PLN03230        256 FGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAPKAAE----ALRITAAEL  325 (431)
T ss_pred             hcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchHHHHH----HcCCCHHHH
Confidence            347899999999999777766556789999999876544      2344444444443322333444    348999999


Q ss_pred             HHcCCcccccC
Q psy11396        727 KERGISMPVLP  737 (829)
Q Consensus       727 ~~~GLv~~v~~  737 (829)
                      ++.|+||+|+|
T Consensus       326 ~~~GiID~II~  336 (431)
T PLN03230        326 VKLGVVDEIVP  336 (431)
T ss_pred             HhCCCCeEecc
Confidence            99999999997

>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=97.31  E-value=0.00012  Score=72.44  Aligned_cols=132  Identities=19%  Similarity=0.071  Sum_probs=83.3

Q ss_pred             ccccccccccchhhhccccccee--eeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccc
Q psy11396        586 NSTVVKGITDAFSYINSSVQYKV--IIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIG  663 (829)
Q Consensus       586 ~~~~~~eL~~~l~~~~~d~~vr~--vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~G  663 (829)
                      ++....++...+..++.++..+.  +.|.      |.|+++..-....+.            +..++.|+++.+.|.|.+
T Consensus        19 ~~~~~~~i~~~l~~~~~~~~~~~i~l~in------SpGG~v~~~~~i~~~------------l~~~~~~v~t~~~g~aaS   80 (171)
T cd07017          19 DDEVANLIIAQLLYLESEDPKKPIYLYIN------SPGGSVTAGLAIYDT------------MQYIKPPVSTICLGLAAS   80 (171)
T ss_pred             cHHHHHHHHHHHHHHHccCCCCceEEEEE------CCCCCHHHHHHHHHH------------HHhcCCCEEEEEEeEehh
Confidence            44445555666666665443333  3334      334454333222221            122578999999999999


Q ss_pred             hhhhhhhccc--cccccccceeccccccccccCCCcc---------------eecccccc--CHHHHHHHHhcCCccCHH
Q psy11396        664 AGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGS---------------TLIFPQRF--GKILSREILFTASEFKGK  724 (829)
Q Consensus       664 gG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~---------------~~~l~r~i--G~~~a~e~ll~g~~~~a~  724 (829)
                      +|..+++++|  .|++.++++|++-+...+..-...-               ...+..+-  ......+++-.+..++++
T Consensus        81 ~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~lta~  160 (171)
T cd07017          81 MGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRDRYMSAE  160 (171)
T ss_pred             HHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCCccccHH
Confidence            9999999999  7999999999988765443211000               01111222  234556667678889999


Q ss_pred             HHHHcCCcccc
Q psy11396        725 ELKERGISMPV  735 (829)
Q Consensus       725 eA~~~GLv~~v  735 (829)
                      ||+++||||+|
T Consensus       161 EA~e~GiiD~V  171 (171)
T cd07017         161 EAKEYGLIDKI  171 (171)
T ss_pred             HHHHcCCCccC
Confidence            99999999986

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ

>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=97.29  E-value=0.00028  Score=71.93  Aligned_cols=135  Identities=13%  Similarity=0.074  Sum_probs=87.3

Q ss_pred             Ccccccccccccchhhhcccccce--eeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        584 LKNSTVVKGITDAFSYINSSVQYK--VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       584 ~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .+++.+..++...|..++.....+  .|.|.      |.|+++..-....+            .+..++.|+++.+.|.|
T Consensus        43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN------SpGG~v~~g~~I~d------------~i~~~~~~v~t~~~G~a  104 (207)
T PRK12553         43 QVDDASANDVMAQLLVLESIDPDRDITLYIN------SPGGSVTAGDAIYD------------TIQFIRPDVQTVCTGQA  104 (207)
T ss_pred             eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe------CCCCcHHHHHHHHH------------HHHhcCCCcEEEEEeeh
Confidence            445566666666776666543222  34444      34455544332222            12225668999999999


Q ss_pred             cchhhhhhhccc--cccccccceeccccccc-cccCCCcce------------------eccccccC--HHHHHHHHhcC
Q psy11396        662 IGAGWAMGLFCD--YTIFSEESVYQSPYMRY-GFTPGAGST------------------LIFPQRFG--KILSREILFTA  718 (829)
Q Consensus       662 ~GgG~~lal~cD--~~ia~~~a~f~~~e~~~-Gl~p~~g~~------------------~~l~r~iG--~~~a~e~ll~g  718 (829)
                      .++|..++++||  .|++.++++|++-.... |..  .|-.                  ..+.+.-|  .....+++-.+
T Consensus       105 aSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~--~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~~~~~~  182 (207)
T PRK12553        105 ASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGI--RGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRKDTDRD  182 (207)
T ss_pred             hhHHHHHHHcCCcCcEEECCCchhhhcCccccCCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcC
Confidence            999999999999  58999999998876543 211  1110                  11222223  45666777778


Q ss_pred             CccCHHHHHHcCCcccccCh
Q psy11396        719 SEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       719 ~~~~a~eA~~~GLv~~v~~~  738 (829)
                      ..++|+||+++||||+|+..
T Consensus       183 ~~lta~EA~e~GliD~I~~~  202 (207)
T PRK12553        183 KWLTAEEAKDYGLVDQIITS  202 (207)
T ss_pred             ccccHHHHHHcCCccEEcCc
Confidence            89999999999999999863

>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

Probab=97.24  E-value=0.00078  Score=78.21  Aligned_cols=110  Identities=15%  Similarity=0.182  Sum_probs=74.0

Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      .....|+|++|-|.|.|||......||+++|.++++++.      +.|.++++..+...--...|.    ..-.+||++.
T Consensus       277 asl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~sV------isPEgaAsILwkd~~~A~eAA----e~lkiTa~dL  346 (762)
T PLN03229        277 FGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKAAPKAA----EKLRITAQEL  346 (762)
T ss_pred             hCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEEe------cCHHHHHHHHhcCcccHHHHH----HHcCCCHHHH
Confidence            347899999999999988887777799999998876543      334444444443332222333    3468999999


Q ss_pred             HHcCCcccccChh-------------hHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11396        727 KERGISMPVLPRK-------------QVLFYSLKLAKKLSLLSKKELELQKKY  766 (829)
Q Consensus       727 ~~~GLv~~v~~~~-------------~l~~~~~~~a~~i~~~~~~a~~~~K~~  766 (829)
                      +++|+||+|+|..             .+...+.+....+...++..+...+..
T Consensus       347 ~~lGiiD~IIpEp~ggAh~d~~~~~~~l~~~i~~~L~~l~~~~~~~l~~~R~~  399 (762)
T PLN03229        347 CRLQIADGIIPEPLGGAHADPSWTSQQIKIAINENMDELGKMDTEELLKHRML  399 (762)
T ss_pred             HhCCCCeeeccCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence            9999999999721             223334445555666677665554443

>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit

Probab=97.17  E-value=0.0012  Score=70.77  Aligned_cols=81  Identities=20%  Similarity=0.248  Sum_probs=56.3

Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      .....|+|++|-|.|.|||......||++++.+++.++.      +.|.++.+..+...   .++.+..- -..+++.++
T Consensus       186 s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~sV------isPEg~a~Il~kd~---~~a~~aae-~~~~ta~~l  255 (316)
T TIGR00513       186 ARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYSV------ISPEGCAAILWKDA---SKAPKAAE-AMKITAPDL  255 (316)
T ss_pred             HcCCCCEEEEEecccccHHHhhhccCCEEEEecCceEEe------cCHHHHHHHhccch---hhHHHHHH-HccCCHHHH
Confidence            347899999999999888876555799999998876654      22333333333222   22222222 267789999


Q ss_pred             HHcCCcccccC
Q psy11396        727 KERGISMPVLP  737 (829)
Q Consensus       727 ~~~GLv~~v~~  737 (829)
                      ++.|+||+|+|
T Consensus       256 ~~~G~iD~II~  266 (316)
T TIGR00513       256 KELGLIDSIIP  266 (316)
T ss_pred             HHCCCCeEecc
Confidence            99999999997

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.10  E-value=0.00045  Score=75.23  Aligned_cols=134  Identities=18%  Similarity=0.226  Sum_probs=87.7

Q ss_pred             cccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhhhh
Q psy11396        591 KGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGL  670 (829)
Q Consensus       591 ~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal  670 (829)
                      +.+...++.+..++++++|||.    .=|.|+............+.         +. -.||+++.|.++|.-||..+++
T Consensus        83 ~~~~~~l~~~~~~~~vk~vvL~----inSPGG~v~as~~i~~~l~~---------l~-~~~PV~v~v~~~AASGGY~IA~  148 (317)
T COG0616          83 DDIEEILRAARADPSVKAVVLR----INSPGGSVVASELIARALKR---------LR-AKKPVVVSVGGYAASGGYYIAL  148 (317)
T ss_pred             HHHHHHHHHHhcCCCCceEEEE----EECcCCchhHHHHHHHHHHH---------Hh-hcCCEEEEECCeecchhhhhhc
Confidence            3455677888889999999886    33455555433222222111         11 2349999999999999999999


Q ss_pred             ccccccccccceeccccccccccCCCcceeccccccC-------------------------------------------
Q psy11396        671 FCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG-------------------------------------------  707 (829)
Q Consensus       671 ~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG-------------------------------------------  707 (829)
                      +||.++|++.+..|--.+..+. |...   .+...+|                                           
T Consensus       149 aAd~I~a~p~si~GSIGVi~~~-~~~~---~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~~~e~y~~F~~~  224 (317)
T COG0616         149 AADKIVADPSSITGSIGVISGA-PNFE---ELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKEIDETYDEFVDK  224 (317)
T ss_pred             cCCEEEecCCceeeeceeEEec-CCHH---HHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987765554432 1110   0001111                                           


Q ss_pred             -------HHHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396        708 -------KILSREILFTASEFKGKELKERGISMPVLPRKQVL  742 (829)
Q Consensus       708 -------~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~  742 (829)
                             ......-+.+|+.|++++|++.||||++..-++..
T Consensus       225 V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~~~av  266 (317)
T COG0616         225 VAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGLDDAV  266 (317)
T ss_pred             HHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCHHHHH
Confidence                   01112357889999999999999999998544333

>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=97.05  E-value=0.00081  Score=67.87  Aligned_cols=93  Identities=14%  Similarity=0.031  Sum_probs=63.3

Q ss_pred             CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCcc----------------eeccccccC--H
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQRFG--K  708 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~iG--~  708 (829)
                      ++.||++.+.|.|.+.|..++++||-  |++.++++|.+-...-++. +...                ...+...-|  .
T Consensus        80 ~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~-G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~  158 (197)
T PRK14512         80 VKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFK-GVATDIEIYANELNKVKSELNDIIAKETGQEL  158 (197)
T ss_pred             CCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccc-cCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            57799999999999999999999985  8888888887655432221 1100                000111112  3


Q ss_pred             HHHHHHHhcCCccCHHHHHHcCCcccccCh-hhHH
Q psy11396        709 ILSREILFTASEFKGKELKERGISMPVLPR-KQVL  742 (829)
Q Consensus       709 ~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~-~~l~  742 (829)
                      ....+++-....++++||+++||+|+|++. +++.
T Consensus       159 ~~i~~~~~~d~~lta~EA~~yGliD~I~~~~~~l~  193 (197)
T PRK14512        159 DKVEKDTDRDFWLDSSSAVKYGLVFEVVETRLELE  193 (197)
T ss_pred             HHHHHhhhcCcccCHHHHHHcCCccEeecCcHHhH
Confidence            345555555677999999999999999974 4443

>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated

Probab=96.97  E-value=0.0021  Score=68.92  Aligned_cols=82  Identities=22%  Similarity=0.299  Sum_probs=57.5

Q ss_pred             cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        646 PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       646 ~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      +.....|+|++|-|.|.|||......||++++.+++.++.      +.|.++....+..   ..++.+..- ...+|+.+
T Consensus       185 ~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~sv------isPEg~a~Il~~~---~~~a~~aae-~~~ita~~  254 (319)
T PRK05724        185 MARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTYSV------ISPEGCASILWKD---ASKAPEAAE-AMKITAQD  254 (319)
T ss_pred             HhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceEee------cCHHHHHHHHhcC---chhHHHHHH-HcCCCHHH
Confidence            3447899999999999888876555699999888876543      2233333332322   133443333 56689999


Q ss_pred             HHHcCCcccccC
Q psy11396        726 LKERGISMPVLP  737 (829)
Q Consensus       726 A~~~GLv~~v~~  737 (829)
                      +++.|+||+|+|
T Consensus       255 l~~~g~iD~II~  266 (319)
T PRK05724        255 LKELGIIDEIIP  266 (319)
T ss_pred             HHHCCCceEecc
Confidence            999999999997

>smart00823 PKS_PP Phosphopantetheine attachment site

Probab=96.84  E-value=0.00099  Score=56.71  Aligned_cols=77  Identities=4%  Similarity=0.091  Sum_probs=65.3

Q ss_pred             CCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         22 INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      .++++....+...+.+.+..+++......++.+..|. ++|+ ||+.+++++.+|....++.++....|++|+...++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~-dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~   80 (86)
T smart00823        4 LPPAERRRLLLDLVREQVAAVLGHAAAEAIDPDRPFR-DLGL-DSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAE   80 (86)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCHH-HcCc-hHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHH
Confidence            3455566677788888899999887666579999999 9999 999999999999999999999999999998776543

Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.

>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.82  E-value=0.00033  Score=70.12  Aligned_cols=135  Identities=20%  Similarity=0.173  Sum_probs=83.1

Q ss_pred             Ccccccccccccchhhhc---ccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        584 LKNSTVVKGITDAFSYIN---SSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       584 ~~~~~~~~eL~~~l~~~~---~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      +++.++...+...|..++   ....+ .+.|.      |.|+++..-....+            .+..++.|+++.+.|.
T Consensus        24 ~I~~~~~~~~~~~L~~l~~~~~~~~i-~i~IN------SpGG~v~~g~~i~~------------~i~~~~~~v~t~~~G~   84 (182)
T PF00574_consen   24 PIDEESANRLISQLLYLENEDKNKPI-NIYIN------SPGGDVDAGLAIYD------------AIRSSKAPVTTVVLGL   84 (182)
T ss_dssp             SBSHHHHHHHHHHHHHHHHHTSSSEE-EEEEE------ECEBCHHHHHHHHH------------HHHHSSSEEEEEEEEE
T ss_pred             ccCHHHHHHHHHHHHHHhccCCCceE-EEEEc------CCCCccHHHHHHHH------------HHHhcCCCeEEEEeCc
Confidence            445555666666655553   22222 33345      45566654333222            2223688999999999


Q ss_pred             ccchhhhhhhcccc--ccccccceeccccccccccCCCcc---------------eeccccc--cCHHHHHHHHhcCCcc
Q psy11396        661 AIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGS---------------TLIFPQR--FGKILSREILFTASEF  721 (829)
Q Consensus       661 a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~---------------~~~l~r~--iG~~~a~e~ll~g~~~  721 (829)
                      |.+.|..++++|+.  |++.+++.|++-+...+..-...-               ...+...  .......+++-....+
T Consensus        85 aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~l  164 (182)
T PF00574_consen   85 AASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMDRDTWL  164 (182)
T ss_dssp             EETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCSSTEEE
T ss_pred             cccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhCCccc
Confidence            99999999999999  799999999998886554321100               0111111  1234445555555678


Q ss_pred             CHHHHHHcCCcccccC
Q psy11396        722 KGKELKERGISMPVLP  737 (829)
Q Consensus       722 ~a~eA~~~GLv~~v~~  737 (829)
                      +++||+++||||+|+.
T Consensus       165 ~a~EA~~~GiiD~I~~  180 (182)
T PF00574_consen  165 SAEEALEYGIIDEIIE  180 (182)
T ss_dssp             EHHHHHHHTSSSEEES
T ss_pred             cHHHHHHcCCCCEecc
Confidence            9999999999999974

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....

>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit

Probab=96.79  E-value=0.0016  Score=65.78  Aligned_cols=140  Identities=16%  Similarity=0.079  Sum_probs=85.4

Q ss_pred             cCCcccccccccccchhhhcccccce--eeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYK--VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..++++++..++...+-.++.+...+  .+.|.+.|      +++..-....+            .+..++.|+...+-|
T Consensus        36 ~~~i~~~~a~~ii~~ll~L~~~~~~~~I~l~INSpG------G~v~~g~aIyd------------~m~~~~~~V~Tv~~G   97 (200)
T CHL00028         36 GQEVDDEIANQLIGLMVYLSIEDDTKDLYLFINSPG------GSVISGLAIYD------------TMQFVKPDVHTICLG   97 (200)
T ss_pred             CCeecHHHHHHHHHHHHHHhccCCCCCEEEEEeCCC------cchhhHHHHHH------------HHHhcCCCEEEEEEE
Confidence            34556666666666666655332222  33345434      44433222221            122367788999999


Q ss_pred             cccchhhhhhhccc--cccccccceeccccccccccCCCcc----------------eeccccccC--HHHHHHHHhcCC
Q psy11396        660 HAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQRFG--KILSREILFTAS  719 (829)
Q Consensus       660 ~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~iG--~~~a~e~ll~g~  719 (829)
                      .|.+.|..+++++|  -|++.++++|.+-....|..-+-..                ...+...-|  .....+++-...
T Consensus        98 ~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~~r~~  177 (200)
T CHL00028         98 LAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDMERDV  177 (200)
T ss_pred             ehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCc
Confidence            99999999999998  5899999998887765442111100                011111212  334455566667


Q ss_pred             ccCHHHHHHcCCcccccChh
Q psy11396        720 EFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       720 ~~~a~eA~~~GLv~~v~~~~  739 (829)
                      .++|+||+++||||+|+.+.
T Consensus       178 ~lta~EA~eyGliD~I~~~~  197 (200)
T CHL00028        178 FMSATEAKAYGIVDLVAVNN  197 (200)
T ss_pred             cCCHHHHHHcCCCcEEeecC
Confidence            79999999999999998643

>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP

Probab=96.73  E-value=0.0022  Score=64.51  Aligned_cols=89  Identities=18%  Similarity=-0.030  Sum_probs=60.3

Q ss_pred             CCCCEEEEecccccchhhhhhhccc--cccccccceeccccccccccCCCcce---------------eccccccC--HH
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGST---------------LIFPQRFG--KI  709 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~---------------~~l~r~iG--~~  709 (829)
                      ++.|+...+-|.|.+.|.-+++++|  .|++.++++|++-...-|......-.               ..+.++-|  ..
T Consensus        83 ~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~  162 (191)
T TIGR00493        83 IKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLE  162 (191)
T ss_pred             cCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHH
Confidence            3456666677999999988887655  68999999999876543321100000               11222223  45


Q ss_pred             HHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        710 LSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       710 ~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ...+++-.+..++++||+++||+|+|+.
T Consensus       163 ~i~~~~~~~~~lta~EA~~~GliD~ii~  190 (191)
T TIGR00493       163 QIEKDTERDFFMSAEEAKEYGLIDSVLT  190 (191)
T ss_pred             HHHHHhhCCccCcHHHHHHcCCccEEec
Confidence            5666677778899999999999999874

This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=96.62  E-value=0.0054  Score=59.78  Aligned_cols=90  Identities=16%  Similarity=0.175  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCc----ce
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGP----CL  278 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp----~~  278 (829)
                      .-|++.|++.+|++.++++++|.    -+++||-.+-..                  .-.++..+...||+.|.    .+
T Consensus        54 vTmA~nAa~~ll~~~~id~~~Ig----~l~vgTES~vD~------------------sKs~~t~v~~ll~~s~~~~~~~~  111 (174)
T PF01154_consen   54 VTMAANAAKPLLDRYNIDPDDIG----RLIVGTESGVDK------------------SKSISTYVHQLLGLSGNPDCRGV  111 (174)
T ss_dssp             HHHHHHHHHTTHHHHT-HHHHEE----EEEEE-SS-SBS------------------SS-HHHHHHHHTTTTT-SSSEEE
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcc----EEEEeccccccc------------------cccHHHHHHHHhCcCCCCceeee
Confidence            45899999999999888777765    577776543211                  11256678888998553    24


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCC--EEEEeccccc
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSK--IALAGGVYII  314 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d--~aLvgG~e~~  314 (829)
                      -+-.+|-+|..||..|+.+|+++..+  .+||.+.|..
T Consensus       112 e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA  149 (174)
T PF01154_consen  112 EMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIA  149 (174)
T ss_dssp             EEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE
T ss_pred             ehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecccc
Confidence            57899999999999999999999765  8999999974

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>CHL00124 acpP acyl carrier protein; Validated

Probab=96.55  E-value=0.0011  Score=57.02  Aligned_cols=69  Identities=10%  Similarity=0.074  Sum_probs=56.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-|..+++.++|.+ ++.|.++..|..++|+ ||+..+||-.+|+..+|+.+|.....+.+|...+..+
T Consensus         6 i~~~l~~ii~~~~~~~-~~~i~~d~~l~~dlg~-DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~   74 (82)
T CHL00124          6 IFEKVQSIVAEQLGIE-KSEVTLDANFTRDLGA-DSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDF   74 (82)
T ss_pred             HHHHHHHHHHHHHCCC-HHHCCCCcchhhhcCC-cHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHH
Confidence            4555666677778774 5679999999856999 9999999999999999999999887777777665544

>PRK05654 acetyl-CoA carboxylase subunit beta; Validated

Probab=96.51  E-value=0.0063  Score=65.02  Aligned_cols=91  Identities=14%  Similarity=0.117  Sum_probs=64.9

Q ss_pred             CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      ...|.|+++.|+|+||+. .+++.+|++++.+++.+++...++           +...++.    + + ..+.-+++-+.
T Consensus       193 a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGprv-----------ie~~~~e----~-l-pe~~~~ae~~~  255 (292)
T PRK05654        193 AGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPRV-----------IEQTVRE----K-L-PEGFQRAEFLL  255 (292)
T ss_pred             CCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHHH-----------HHhhhhh----h-h-hhhhcCHHHHH
Confidence            578999999999999976 468889999998888777643321           1111111    1 1 11122567788


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHHhcCC
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKLSLLS  756 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~~  756 (829)
                      +.|+||.|+++.++.+...++++.+...+
T Consensus       256 ~~G~vD~Vv~~~e~r~~l~~~L~~~~~~~  284 (292)
T PRK05654        256 EHGAIDMIVHRRELRDTLASLLALHTKQP  284 (292)
T ss_pred             hCCCCcEEECHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999998888888775543

>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification

Probab=96.42  E-value=0.0035  Score=60.87  Aligned_cols=99  Identities=17%  Similarity=0.118  Sum_probs=61.9

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceecccccc------------ccccCCCcc-----eecccc-cc----
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGS-----TLIFPQ-RF----  706 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~-----~~~l~r-~i----  706 (829)
                      ..||+||.++|.|..++..++.+||-+++.+.+.++...+.            +|+-+..--     ....++ -+    
T Consensus         5 ~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~~~   84 (154)
T PF01343_consen    5 SGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSEEE   84 (154)
T ss_dssp             TT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--HHH
T ss_pred             cCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCHHH
Confidence            58999999999999999999999999999999887764433            232211100     000000 00    


Q ss_pred             -------------------------CHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHH
Q psy11396        707 -------------------------GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL  748 (829)
Q Consensus       707 -------------------------G~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~  748 (829)
                                               ..... +-++.|..|++++|++.||||++...+++.+.+.+.
T Consensus        85 r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v-~~~~~~~~~~~~~A~~~GLiD~i~~~~~~~~~l~~~  150 (154)
T PF01343_consen   85 RENLQELLDELYDQFVNDVAEGRGLSPDDV-EEIADGGVFTAQQALELGLIDEIGTFDEAIARLAKL  150 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTS-HHHH-HCHHCCHEEEHHHHHHTTSSSEETSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCHHHH-HHHHhhccccHHHHHHcCchhhcCCHHHHHHHHHHH
Confidence                                     01111 226788999999999999999998777776655543

; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.

>PRK11778 putative inner membrane peptidase; Provisional

Probab=96.26  E-value=0.0042  Score=67.24  Aligned_cols=98  Identities=18%  Similarity=0.218  Sum_probs=66.2

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceecccccc------------ccccCCCcc--------eec-------
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGS--------TLI-------  701 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~--------~~~-------  701 (829)
                      ..||+|+.+.+.|.-||..++++||-+++.+.+.++...+.            +|+-+..-.        ..+       
T Consensus       153 ~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~pf~~~see~  232 (330)
T PRK11778        153 AGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTLFGENTEEG  232 (330)
T ss_pred             cCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCCCCCCCHHH
Confidence            57999999999999999999999999999999887664442            222111000        000       


Q ss_pred             ---ccccc-------------CH-HHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHH
Q psy11396        702 ---FPQRF-------------GK-ILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSL  746 (829)
Q Consensus       702 ---l~r~i-------------G~-~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~  746 (829)
                         +...+             ++ ....+-+.+|+.|++++|++.||||++...+++.....
T Consensus       233 Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~i~~~~  294 (330)
T PRK11778        233 REKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDYLLELM  294 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHHHHHHH
Confidence               00000             00 01123467899999999999999999998776654433

>TIGR03133 malonate_beta malonate decarboxylase, beta subunit

Probab=96.16  E-value=0.0096  Score=62.77  Aligned_cols=87  Identities=20%  Similarity=0.186  Sum_probs=56.8

Q ss_pred             CCEEEEeccc--ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCH--HHHHHHHhcCCccCHHHH
Q psy11396        651 IPVIAAMQGH--AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK--ILSREILFTASEFKGKEL  726 (829)
Q Consensus       651 kp~Iaav~G~--a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~--~~a~e~ll~g~~~~a~eA  726 (829)
                      .|+|+++.|+  |+||+..++.+||++|+++++++++....+           +-...|.  -...+--+..+.+.++..
T Consensus       137 vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aGP~V-----------Ie~~~G~e~~~~~d~~l~~~~lGG~~~  205 (274)
T TIGR03133       137 VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSGPEV-----------IEQEAGVEEFDSRDRALVWRTTGGKHR  205 (274)
T ss_pred             CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccCHHH-----------HHHhcCCCccCHHHhcccccccchHhH
Confidence            8999999999  899999999999999999988777633221           1111111  011222222344556677


Q ss_pred             HHcCCcccccChh--hHHHHHHHH
Q psy11396        727 KERGISMPVLPRK--QVLFYSLKL  748 (829)
Q Consensus       727 ~~~GLv~~v~~~~--~l~~~~~~~  748 (829)
                      ...|++|.+++++  .+...+.++
T Consensus       206 ~~sG~~D~~v~dd~~a~~~~~~~~  229 (274)
T TIGR03133       206 FLSGDADVLVEDDVDAFRAAVIAA  229 (274)
T ss_pred             hhcccceEEeCCHHHHHHHHHHHH
Confidence            7899999999864  344444433

Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.

>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed

Probab=96.12  E-value=0.015  Score=61.77  Aligned_cols=87  Identities=17%  Similarity=0.123  Sum_probs=60.0

Q ss_pred             CCCCEEEEecccccchhhh-hhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGWA-MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~-lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      -..|.|+++.|+|.||+.. +++.||++|+.+++.+++...++=           -..+|..      +.-.-=+++-.+
T Consensus       206 ~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPrVI-----------e~t~ge~------lpe~fq~ae~l~  268 (296)
T CHL00174        206 KKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVI-----------EQTLNKT------VPEGSQAAEYLF  268 (296)
T ss_pred             CCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHHHH-----------HHhcCCc------CCcccccHHHHH
Confidence            4689999999999999875 577899999877777666433210           0001100      000112467788


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHH
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKL  752 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i  752 (829)
                      +.|+||.||++.+|.+.+.++++-+
T Consensus       269 ~~G~vD~iV~r~~lr~~l~~ll~~~  293 (296)
T CHL00174        269 DKGLFDLIVPRNLLKGVLSELFQLH  293 (296)
T ss_pred             hCcCceEEEcHHHHHHHHHHHHHhh
Confidence            9999999999999988777776543

>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=96.05  E-value=0.0091  Score=61.02  Aligned_cols=87  Identities=15%  Similarity=-0.082  Sum_probs=61.5

Q ss_pred             CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCccee-----------------ccccccC--
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRFG--  707 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~iG--  707 (829)
                      ++-|+...+-|.|.+.|..+++++|.  |++.++++|++-...-|..  +-..-                 .+.+.-|  
T Consensus       111 ~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~--G~a~di~i~a~el~~~~~~i~~iya~~TG~~  188 (221)
T PRK14514        111 ISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQ--GQASDIEITAREIQKLKKELYTIIADHSGTP  188 (221)
T ss_pred             cCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccC--CCcchHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence            56688999999999999999999996  8888898888776543321  11110                 0111112  


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      .....+.+-....++|+||+++||||+|+.
T Consensus       189 ~e~I~~~~~rd~wmtA~EA~eyGliD~Vi~  218 (221)
T PRK14514        189 FDKVWADSDRDYWMTAQEAKEYGMIDEVLI  218 (221)
T ss_pred             HHHHHHHhhcCccCCHHHHHHcCCccEEee
Confidence            334445555667799999999999999985

>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=96.02  E-value=0.011  Score=59.53  Aligned_cols=89  Identities=17%  Similarity=0.081  Sum_probs=63.7

Q ss_pred             CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCccee-----------------ccccccC--
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRFG--  707 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~iG--  707 (829)
                      ++-|+...+.|.|.+.+..+++++|-  |++.+++++.+-....|.  .+....                 .+.++-|  
T Consensus        84 ~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~--~G~a~di~~~a~el~~~~~~l~~iya~~Tg~~  161 (201)
T PRK14513         84 IKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGF--RGNTPDLEVQAKEVLFLRDTLVDIYHRHTDLP  161 (201)
T ss_pred             cCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence            56688899999999999999999996  899999999887765443  111111                 1112222  


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      .....+++-....++|+||+++||||+|+++.
T Consensus       162 ~~~I~~~~~rd~~msa~EA~eyGliD~I~~~~  193 (201)
T PRK14513        162 HEKLLRDMERDYFMSPEEAKAYGLIDSVIEPT  193 (201)
T ss_pred             HHHHHHHhccCcccCHHHHHHcCCCcEEeccC
Confidence            33444555556679999999999999998653

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=95.94  E-value=0.027  Score=66.63  Aligned_cols=86  Identities=15%  Similarity=0.141  Sum_probs=60.9

Q ss_pred             cccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhh
Q psy11396        587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGW  666 (829)
Q Consensus       587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~  666 (829)
                      ...+.++.++++.+.+|+.+++|||.-.+   +.|+....+.........+         ....||+||..++.+ -+|.
T Consensus        75 ~~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~~ei~~ai~~f---------k~sgKpVvA~~~~~~-s~~Y  141 (584)
T TIGR00705        75 AISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHLVEIGSALSEF---------KDSGKPVYAYGTNYS-QGQY  141 (584)
T ss_pred             CcCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHHHHHHHHHHHH---------HhcCCeEEEEEcccc-chhh
Confidence            44578899999999999999999998542   1244443333332222221         125799999888765 5678


Q ss_pred             hhhhccccccccccceecc
Q psy11396        667 AMGLFCDYTIFSEESVYQS  685 (829)
Q Consensus       667 ~lal~cD~~ia~~~a~f~~  685 (829)
                      .++.+||-+++.+...+++
T Consensus       142 ylAs~AD~I~~~p~G~v~~  160 (584)
T TIGR00705       142 YLASFADEIILNPMGSVDL  160 (584)
T ss_pred             hhhhhCCEEEECCCceEEe
Confidence            8999999999999877654

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>PRK07639 acyl carrier protein; Provisional

Probab=95.94  E-value=0.01  Score=51.45  Aligned_cols=57  Identities=12%  Similarity=0.077  Sum_probs=48.1

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI   88 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~   88 (829)
                      +.+-+++++...++.+..+.+.++..|..++|+ ||+.++||--.|+..+|+++|..-
T Consensus         6 i~~~i~~il~e~l~~~~~~~i~~d~~l~edL~l-DSld~velv~~lE~~fgi~i~d~~   62 (86)
T PRK07639          6 LKNAVLKIMEEKLELKNVTHLEETMRLNEDLYI-DSVMMLQLIVYIEMDVKLCVPEDE   62 (86)
T ss_pred             HHHHHHHHHHHHhCCCccccCCCCCCcccccCC-ChHHHHHHHHHHHHHHCCccCHHH
Confidence            344556666677777666789999999988999 999999999999999999999874

>PRK05883 acyl carrier protein; Validated

Probab=95.91  E-value=0.0053  Score=53.76  Aligned_cols=78  Identities=6%  Similarity=0.078  Sum_probs=62.3

Q ss_pred             cccCCCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccc
Q psy11396         18 FDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLK   97 (829)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a   97 (829)
                      |......+++...|    .++++.+||. +++.|.++..|..++|+ |||..++|--.|+..+|++++.....+.+|...
T Consensus         6 ~~~~~~~~~I~~~l----~~iia~~l~v-~~~~I~~d~~l~~dlg~-DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~d   79 (91)
T PRK05883          6 FAMTSSPSTVSATL----LSILRDDLNV-DLTRVTPDARLVDDVGL-DSVAFAVGMVAIEERLGVALSEEDLLSCDTVGD   79 (91)
T ss_pred             cCCCCCHHHHHHHH----HHHHHHHhCC-ChhhCCCCCchhhccCC-ChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHH
Confidence            44445556655544    5566677887 46789999999779999 999999999999999999999998888888776


Q ss_pred             cccc
Q psy11396         98 SKNL  101 (829)
Q Consensus        98 ~~~~  101 (829)
                      +..+
T Consensus        80 l~~~   83 (91)
T PRK05883         80 LEAA   83 (91)
T ss_pred             HHHH
Confidence            6554

>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=95.85  E-value=0.013  Score=58.96  Aligned_cols=89  Identities=18%  Similarity=-0.028  Sum_probs=60.2

Q ss_pred             CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCcc----------------eeccccccC--H
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQRFG--K  708 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~iG--~  708 (829)
                      ++-|+...+-|.|.+.+..+++++|-  |++.+++++++-...-|. -+...                ...+.++-|  .
T Consensus        82 ~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~-~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~  160 (196)
T PRK12551         82 VKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGA-RGQASDIRIQADEILFLKERLNTELSERTGQPL  160 (196)
T ss_pred             cCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCccc-CCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence            56678888899999999999999885  788888888876654221 11000                000111112  2


Q ss_pred             HHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        709 ILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       709 ~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      ....+++-....++|+||+++||||+|++.
T Consensus       161 ~~i~~~~~rd~~msa~EA~eyGliD~I~~~  190 (196)
T PRK12551        161 ERIQEDTDRDFFMSPSEAVEYGLIDLVIDK  190 (196)
T ss_pred             HHHHHHhhcCcCCCHHHHHHcCCCcEEecc
Confidence            344455555567999999999999999864

>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit

Probab=95.82  E-value=0.014  Score=62.06  Aligned_cols=88  Identities=16%  Similarity=0.129  Sum_probs=63.0

Q ss_pred             CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      ...|.|+++.|+|.||+. .+++.+|++++.+++.+++...++           +.+.+|..      +.-+.=+++-++
T Consensus       192 ~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGprV-----------ie~ti~e~------lpe~~q~ae~~~  254 (285)
T TIGR00515       192 RGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRV-----------IEQTVREK------LPEGFQTSEFLL  254 (285)
T ss_pred             CCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHHH-----------HHHHhcCc------cchhcCCHHHHH
Confidence            578999999999999976 467899999999988877744431           11111110      001122556688


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                      +.|+||.|+++.++.+...++.+.+.
T Consensus       255 ~~G~vD~iv~~~~~r~~l~~~L~~~~  280 (285)
T TIGR00515       255 EHGAIDMIVHRPEMKKTLASLLAKLQ  280 (285)
T ss_pred             hCCCCcEEECcHHHHHHHHHHHHHHh
Confidence            99999999999999988888777654

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>TIGR00517 acyl_carrier acyl carrier protein

Probab=95.78  E-value=0.0045  Score=52.45  Aligned_cols=67  Identities=10%  Similarity=0.108  Sum_probs=54.1

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSK   99 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~   99 (829)
                      +.+-+.+.++.++|.+ ++.+.++..|..++|+ ||+..+||--.|+..+|+.+|..-.....|...+.
T Consensus         4 i~~~l~~il~~~~~~~-~~~i~~~~~l~~dlgl-DSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~   70 (77)
T TIGR00517         4 IFEKVKAIIKEQLNVD-EDQVTPDASFVEDLGA-DSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAV   70 (77)
T ss_pred             HHHHHHHHHHHHHCCC-HHHCCCCcchhhhcCC-cHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHH
Confidence            3455667777778874 5689999999779999 99999999999999999999988766666655443

S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.

>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]

Probab=95.76  E-value=0.029  Score=58.27  Aligned_cols=82  Identities=22%  Similarity=0.338  Sum_probs=62.9

Q ss_pred             cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        646 PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       646 ~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      +..++.|+||.|=|---+||.--...+|.+++-++++++.      +.|.++++..|-.-   .++.+. ...-.+|+++
T Consensus       184 m~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~---~ka~eA-Ae~mkita~d  253 (317)
T COG0825         184 MARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDA---SKAKEA-AEAMKITAHD  253 (317)
T ss_pred             HhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcCh---hhhHHH-HHHcCCCHHH
Confidence            4458999999999977777766566689999999998874      56777766555433   444443 3346899999


Q ss_pred             HHHcCCcccccC
Q psy11396        726 LKERGISMPVLP  737 (829)
Q Consensus       726 A~~~GLv~~v~~  737 (829)
                      .+++||||.|+|
T Consensus       254 Lk~lgiID~II~  265 (317)
T COG0825         254 LKELGIIDGIIP  265 (317)
T ss_pred             HHhCCCcceecc
Confidence            999999999997

>PRK12449 acyl carrier protein; Provisional

Probab=95.64  E-value=0.0072  Score=51.60  Aligned_cols=68  Identities=13%  Similarity=-0.002  Sum_probs=54.0

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+-+.+++..+++.+ +..+.++..|..++|+ ||+..++|--.|+..+|+.+|+.-.++.+|...+..+
T Consensus         7 ~~~l~~il~~~~~~~-~~~i~~~~~l~~dlg~-DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~   74 (80)
T PRK12449          7 FERLINLIQKQRSYL-SLAITEQTHLKDDLAV-DSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDY   74 (80)
T ss_pred             HHHHHHHHHHHhCCC-ccccCCCCcHHHHcCC-cHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHH
Confidence            334445555666654 4589999999779999 9999999999999999999999888888777655443

>PRK07081 acyl carrier protein; Provisional

Probab=95.55  E-value=0.006  Score=52.50  Aligned_cols=65  Identities=9%  Similarity=0.026  Sum_probs=51.3

Q ss_pred             HHhhhHHhhhhccCC-CCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecc--ccccccc
Q psy11396         32 KKNNSKIINDTISYD-NSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYD--NSKKLKS   98 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd--~pt~~a~   98 (829)
                      ++-+++++..+++.. +++.++++..|. ++|+ ||+.+++|.-.|+..+|+.+|......  .+|...+
T Consensus         2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~-dlGl-DSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l   69 (83)
T PRK07081          2 KNTIRTILKKVAKLEVPIDSIADDADLY-EAGL-SSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDAL   69 (83)
T ss_pred             hHHHHHHHHHHHcCCCCHHhcCCCCCHh-hcCC-CHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHH
Confidence            344566777776665 567999999999 9999 999999999999999999999986532  4444443

>PRK09184 acyl carrier protein; Provisional

Probab=95.53  E-value=0.0091  Score=51.98  Aligned_cols=70  Identities=9%  Similarity=0.027  Sum_probs=56.0

Q ss_pred             HHHhhhHHhhhhccC--CCCCCCcCCCcc-cccccccccccHHHHHHHHhhhcCccccCc---eecccccccccccc
Q psy11396         31 IKKNNSKIINDTISY--DNSKKLKSKNLS-INNDDFDKSINNDDIDKSIKKNNSKIINDT---ISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t---~~fd~pt~~a~~~~  101 (829)
                      |.+-+.++|+..||-  -+++.|.++..| ..+||+ |||-++||.-.|+..+|+++++.   ..+..+|...++.+
T Consensus         7 l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLgl-DSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~   82 (89)
T PRK09184          7 LERELAELIVEELNLEDVQPESIDADAPLYGEGLGL-DSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAY   82 (89)
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCC-cHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHH
Confidence            556677888899986  478899999997 437999 99999999999999999999753   34456776666554

>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily

Probab=95.41  E-value=0.024  Score=58.89  Aligned_cols=50  Identities=20%  Similarity=0.143  Sum_probs=45.8

Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCC
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA  696 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~  696 (829)
                      ..++.++++.|+..|..+|.-++++||-+++.+++.+|-...++|-.|..
T Consensus       115 ~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~  164 (285)
T PF01972_consen  115 REHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAA  164 (285)
T ss_pred             HhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChH
Confidence            34788999999999999999999999999999999999999999987754

The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=95.39  E-value=0.045  Score=47.77  Aligned_cols=89  Identities=15%  Similarity=0.241  Sum_probs=54.7

Q ss_pred             HHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCC
Q psy11396        403 YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLP  482 (829)
Q Consensus       403 l~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ip  482 (829)
                      |+++|++++|||++.+|-....     -.+.+.+.++-   ..+..+ ... ..+||+.+|+-.+.+..+   ++.|.+.
T Consensus         1 L~~~g~~~~did~~i~hq~~~~-----~~~~~~~~lgi---~~~~~~-~~~-~~~Gn~~sa~~~~~L~~~---~~~g~~~   67 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQASKK-----ILDSIAKRLGI---PPERFP-DNL-AEYGNTGSASIPINLADA---LEEGRIK   67 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSSHH-----HHHHHHHHHTS----GGGBE--TH-HHH-B-GGGHHHHHHHHH---HHTTSSC
T ss_pred             CccccCCHHHCCEEEeCCCCHH-----HHHHHHHHcCC---cHHHHH-HHH-hccCcchhhhHHHHHHHH---HHcCCCC
Confidence            6889999999999999955432     23345555542   111122 222 567999999977777654   4444332


Q ss_pred             CCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       483 p~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                                       +..++++-++|.|.+-++++++
T Consensus        68 ---------------------------------~Gd~vl~~~~G~G~~~~~~~~~   89 (90)
T PF08541_consen   68 ---------------------------------PGDRVLLVGFGAGFSWGAAVLR   89 (90)
T ss_dssp             ---------------------------------TTEEEEEEEEETTTEEEEEEEE
T ss_pred             ---------------------------------CCCEEEEEEEEhhheeEEEEEE
Confidence                                             2356889999999999998886

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>PRK05350 acyl carrier protein; Provisional

Probab=95.32  E-value=0.0091  Score=51.28  Aligned_cols=67  Identities=13%  Similarity=0.096  Sum_probs=53.0

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSK   99 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~   99 (829)
                      +.+.|.++++.+++. +++.|.++..|..++|+ |||..+||--.|+..+|++++.....+.+|.....
T Consensus         7 i~~~v~~ii~~~~~~-~~~~i~~d~~l~~dlg~-DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv   73 (82)
T PRK05350          7 ILERLRAILVELFEI-DPEDITPEANLYEDLDL-DSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVV   73 (82)
T ss_pred             HHHHHHHHHHHHhCC-CHHHCCCCccchhhcCC-CHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHH
Confidence            444555666666765 55789999997669999 99999999999999999999988766666655443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=94.79  E-value=0.015  Score=76.85  Aligned_cols=70  Identities=4%  Similarity=-0.024  Sum_probs=62.5

Q ss_pred             HHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         29 KSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      ..+.+.+.++...+||.. ++.++++..|. ++|+ |||.+++|+++|++..|+.++.+..|++||...++.+
T Consensus       847 ~~~~~~l~~~~~~vl~~~-~~~i~~~~~ff-~lGg-dSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~  916 (1389)
T TIGR03443       847 TETEREIRDLWLELLPNR-PATISPDDSFF-DLGG-HSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKE  916 (1389)
T ss_pred             CHHHHHHHHHHHHHhCCC-ccccCcCcchh-hcCc-cHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHH
Confidence            346677888899999985 56799999999 9999 9999999999999999999999999999998877664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit

Probab=94.71  E-value=0.033  Score=57.77  Aligned_cols=83  Identities=16%  Similarity=0.075  Sum_probs=54.2

Q ss_pred             CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcC--CccCHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTA--SEFKGKE  725 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g--~~~~a~e  725 (829)
                      .+.|+|+.|-|.++|||+ .+.+.+|.+++.+++       .+++.+..+++..+-+-.  ..+.++.-.=  -..+.+.
T Consensus       106 ~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A-------~i~vm~~e~aa~I~~~~~--~~~~e~a~~~~~~a~~~~~  176 (238)
T TIGR03134       106 AGHPVIGLIYGKAISGAFLAHGLQADRIIALPGA-------MVHVMDLESMARVTKRSV--EELEALAKSSPVFAPGIEN  176 (238)
T ss_pred             CCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCc-------EEEecCHHHHHHHHccCH--hHHHHHHHhhhhhccCHHH
Confidence            679999999999999987 455567887766555       455544444333232322  3344432221  2356778


Q ss_pred             HHHcCCcccccChhh
Q psy11396        726 LKERGISMPVLPRKQ  740 (829)
Q Consensus       726 A~~~GLv~~v~~~~~  740 (829)
                      ++++|+||+|+++.+
T Consensus       177 ~~~~G~vd~vi~~~~  191 (238)
T TIGR03134       177 FVKLGGVHALLDVAD  191 (238)
T ss_pred             HHhCCCccEEeCCCC
Confidence            999999999998554

Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.

>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=94.55  E-value=0.022  Score=48.62  Aligned_cols=66  Identities=11%  Similarity=0.145  Sum_probs=55.6

Q ss_pred             HHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccc
Q psy11396         29 KSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKL   96 (829)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~   96 (829)
                      ..+++-+.+.+..+|+-. +..+.++..|..++|+ |||-++||--.|+..+|+++|........|..
T Consensus         4 ~~~~~~i~~ii~e~l~~~-~~~i~~~~~~~~dlg~-DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~   69 (80)
T COG0236           4 EAIEERVKDIIAEQLGVD-EEEITTEASFVEDLGL-DSLDLVELVMALEEEFGIEIPDEELENIKTVG   69 (80)
T ss_pred             HHHHHHHHHHHHHHhCCc-hhhcCcccccccccCc-cHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHH
Confidence            346777888889999987 7789999999956999 99999999999999999999998764444443

>PRK07189 malonate decarboxylase subunit beta; Reviewed

Probab=94.38  E-value=0.052  Score=58.02  Aligned_cols=36  Identities=31%  Similarity=0.507  Sum_probs=32.9

Q ss_pred             CCEEEEeccc--ccchhhhhhhccccccccccceeccc
Q psy11396        651 IPVIAAMQGH--AIGAGWAMGLFCDYTIFSEESVYQSP  686 (829)
Q Consensus       651 kp~Iaav~G~--a~GgG~~lal~cD~~ia~~~a~f~~~  686 (829)
                      .|+|+++.|+  |+||+...+.+||++|+++++++++.
T Consensus       146 VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla  183 (301)
T PRK07189        146 VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS  183 (301)
T ss_pred             CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc
Confidence            8999999999  99999999999999999998877663

>PRK07117 acyl carrier protein; Validated

Probab=94.35  E-value=0.047  Score=46.39  Aligned_cols=58  Identities=10%  Similarity=0.007  Sum_probs=48.1

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS   89 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~   89 (829)
                      .+.+-|+++|..++.--+++.+.++..|. |||. |||-.+||-..|...+|+.+|..-.
T Consensus         5 ei~~~v~~ii~e~~p~i~~~~I~~~~~l~-DLg~-DSlD~veiv~~led~f~i~I~~~~~   62 (79)
T PRK07117          5 RIFDILVRHIREVLPDLDQHQFQPEDSLV-DLGA-NSMDRAEIVIMTLESLSLKIPLVEF   62 (79)
T ss_pred             HHHHHHHHHHHHHcCCCCHHHCCCCCChh-hcCC-ChHHHHHHHHHHHHHHCCccCHHHH
Confidence            35566677777777433667999999997 9999 9999999999999999999987653

>PRK10949 protease 4; Provisional

Probab=94.09  E-value=0.16  Score=60.36  Aligned_cols=86  Identities=14%  Similarity=0.154  Sum_probs=56.6

Q ss_pred             cccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhh
Q psy11396        587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGW  666 (829)
Q Consensus       587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~  666 (829)
                      .-.+.++.++++.+.+|+.|++||+.-.+.   .|.....+.........+         ....||+||.-.. +.-++.
T Consensus        94 ~~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~~eI~~ai~~f---------k~sGKpVvA~~~~-~~s~~Y  160 (618)
T PRK10949         94 ENSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSMQYIGKALREF---------RDSGKPVYAVGDS-YSQGQY  160 (618)
T ss_pred             cccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHHHHHHHHHHHH---------HHhCCeEEEEecC-ccchhh
Confidence            345778999999999999999999985432   122322222222211111         1257999985443 344678


Q ss_pred             hhhhccccccccccceecc
Q psy11396        667 AMGLFCDYTIFSEESVYQS  685 (829)
Q Consensus       667 ~lal~cD~~ia~~~a~f~~  685 (829)
                      .|+.+||-+++.+...+++
T Consensus       161 yLASaAD~I~l~P~G~v~~  179 (618)
T PRK10949        161 YLASFANKIYLSPQGVVDL  179 (618)
T ss_pred             hhhhhCCEEEECCCceEEE
Confidence            8999999999999877654

>PRK08172 putative acyl carrier protein IacP; Validated

Probab=93.94  E-value=0.051  Score=46.57  Aligned_cols=58  Identities=16%  Similarity=0.119  Sum_probs=50.1

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceec
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISY   90 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~f   90 (829)
                      +.+-+.+.++.+|+.+ ++.|.++..|..++|+ |||-.++|--.|+..+|+.+|..-..
T Consensus         5 i~~~v~~iiae~l~v~-~~~i~~d~~l~~dL~~-DSld~v~lv~~lEe~F~I~i~~~d~~   62 (82)
T PRK08172          5 IEARVKKVITSCIAVD-VDSINGQTHLVEDLYA-DSLDLIDIVFGLSEEFDISCNENDLP   62 (82)
T ss_pred             HHHHHHHHHHHHHCCC-HHHCCCCcchhhhcCC-CHHHHHHHHHHHHHHHCCCcCHHHHH
Confidence            4566778888899885 5689999999889999 99999999999999999999876543

>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.86  E-value=0.094  Score=52.37  Aligned_cols=90  Identities=19%  Similarity=0.141  Sum_probs=55.3

Q ss_pred             CCCCEEEEecccccchhhhhhhccccc--cccccceeccccccccccCCCcce-e---------------ccccccCHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYT--IFSEESVYQSPYMRYGFTPGAGST-L---------------IFPQRFGKI-  709 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~--ia~~~a~f~~~e~~~Gl~p~~g~~-~---------------~l~r~iG~~-  709 (829)
                      .+.||...+-|.|...|..|++++|..  ++.+++++..--.. |.+-+...- .               .+...-|.. 
T Consensus        84 ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a~~TGq~~  162 (200)
T COG0740          84 IKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYAEHTGQTL  162 (200)
T ss_pred             cCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            688899999999999999999998874  77777666655444 221111100 0               000000111 


Q ss_pred             -HHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        710 -LSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       710 -~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                       +-...+-....++|+||+++||||+|....
T Consensus       163 e~i~~d~drd~~msa~eA~~yGLiD~V~~~~  193 (200)
T COG0740         163 EKIEKDTDRDTWMSAEEAKEYGLIDKVIESR  193 (200)
T ss_pred             HHHHHhhcccccCCHHHHHHcCCcceecccc
Confidence             111122223458999999999999998754

>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A

Probab=93.66  E-value=0.23  Score=45.80  Aligned_cols=64  Identities=11%  Similarity=0.094  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        743 FYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       743 ~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +.+.+..+.|...+|.++..+-+++++....++.+.+++|+.....++ ..+++.|++++.+--+
T Consensus        31 ~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~-~~~DF~EGVRA~LIDK   94 (118)
T PF13766_consen   31 EWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCM-RHPDFAEGVRALLIDK   94 (118)
T ss_dssp             HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHH-CCSCHHHHHHHHTTS-
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh-ccchHHHHHHHHHhcC
Confidence            446667788899999999999999999999999999999999999999 6789999999988533

>PRK12552 ATP-dependent Clp protease-like protein; Reviewed

Probab=93.33  E-value=0.12  Score=52.85  Aligned_cols=88  Identities=19%  Similarity=0.046  Sum_probs=59.4

Q ss_pred             CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCccee-----------------ccccccC--
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRFG--  707 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~iG--  707 (829)
                      ++-++...+-|.|.+.+..+++++|-  |++.++++|.+-....|..  +...-                 .+...-|  
T Consensus       106 ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya~~TG~~  183 (222)
T PRK12552        106 IKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILSRNTGQT  183 (222)
T ss_pred             cCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            55678888999999999999999996  8888999988877654421  11100                 0111111  


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      .....+.+-.-..++|+||+++||||+|+.+
T Consensus       184 ~e~I~~d~~rd~wmsA~EA~eyGliD~Ii~~  214 (222)
T PRK12552        184 VEKLSKDTDRMFYLTPQEAKEYGLIDRVLES  214 (222)
T ss_pred             HHHHHHHhcCCCcCCHHHHHHcCCCcEEecc
Confidence            1222333444456999999999999999864

>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]

Probab=92.99  E-value=0.15  Score=59.35  Aligned_cols=68  Identities=22%  Similarity=0.333  Sum_probs=51.2

Q ss_pred             CCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH--
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL--  726 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA--  726 (829)
                      ..|+|+++.|+|.|||..++..||++|+.++ +.+.+.                    |+...+  ..+|+.++.++.  
T Consensus       131 ~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~vv~--~~~Ge~~~~~~lgG  188 (493)
T PF01039_consen  131 GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPRVVE--SATGEEVDSEELGG  188 (493)
T ss_dssp             TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THHHHH--HHHSSCTSHHHHHB
T ss_pred             CCCeEEEEccccccchhhcccccCccccCccceEEEec--------------------cccccc--cccCccccchhhhh
Confidence            7899999999999999999999999999887 655442                    222222  234677777653  


Q ss_pred             -----HHcCCcccccChh
Q psy11396        727 -----KERGISMPVLPRK  739 (829)
Q Consensus       727 -----~~~GLv~~v~~~~  739 (829)
                           ...|.+|.+++++
T Consensus       189 ~~~h~~~sG~~d~v~~de  206 (493)
T PF01039_consen  189 ADVHAAKSGVVDYVVDDE  206 (493)
T ss_dssp             HHHHHHTSSSSSEEESSH
T ss_pred             hhhhcccCCCceEEEech
Confidence                 4789999999866

The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....

>PRK06508 acyl carrier protein; Provisional

Probab=92.64  E-value=0.12  Score=45.40  Aligned_cols=55  Identities=16%  Similarity=0.117  Sum_probs=47.4

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI   88 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~   88 (829)
                      .+-|.++++.+++. +++.|.++..|..+||+ |||-.++|--.|+..+|+++|..-
T Consensus         5 ~ekv~~Ilae~~~v-d~~~It~ds~~~edL~~-DSLd~veli~~lE~eFgI~i~~ee   59 (93)
T PRK06508          5 FDKVADIIAETSDI-PRDTITPESHTIDDLGI-DSLDFLDIVFAIDKAFGIKLPLEQ   59 (93)
T ss_pred             HHHHHHHHHHHhCC-CHHHCCCCCcchhccCC-CHHHHHHHHHHHHHHHCCccCHHH
Confidence            34567777888887 55799999999889999 999999999999999999998754

>PRK05828 acyl carrier protein; Validated

Probab=92.31  E-value=0.16  Score=43.64  Aligned_cols=67  Identities=12%  Similarity=-0.016  Sum_probs=48.7

Q ss_pred             CchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccc
Q psy11396         23 NNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKK   95 (829)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~   95 (829)
                      .++|+-.++++.+.++   .++. +.+.+.++..|. |||+ |||..+||-..|+..+|+.+|..-...-.|.
T Consensus         2 ~~~eI~~~i~~ii~e~---~~~~-~~d~i~~~~~~~-dLg~-DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv   68 (84)
T PRK05828          2 QEMEILLKIKEIAKKK---NFAV-TLDESNINKPYR-ELKI-DSLDMFSIIVSLESEFNIEFSDEKLMKLKNL   68 (84)
T ss_pred             CHHHHHHHHHHHHHHh---ccCC-CcccccCCCCHH-hcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHhCCCH
Confidence            3456666666655441   2333 446788889997 9999 9999999999999999999998654444443

>PRK10252 entF enterobactin synthase subunit F; Provisional

Probab=91.64  E-value=0.094  Score=68.85  Aligned_cols=67  Identities=7%  Similarity=-0.020  Sum_probs=60.4

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      +.+.+.++.+.+||..   .++++..|. ++|. |||++++|..+|++.+|..++....|.+||...++.+.
T Consensus       979 ~e~~l~~~~~~~l~~~---~~~~~~~ff-~lGg-~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l 1045 (1296)
T PRK10252        979 TETIIAAAFSSLLGCD---VVDADADFF-ALGG-HSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLL 1045 (1296)
T ss_pred             HHHHHHHHHHHHhCCC---CCCCCcCHH-HcCC-ChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHH
Confidence            4556778889999975   799999999 9999 99999999999999999999999999999998887764

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=90.94  E-value=0.42  Score=55.61  Aligned_cols=100  Identities=13%  Similarity=0.054  Sum_probs=62.0

Q ss_pred             cCCCCEEEEecccccchhhhhhh----ccccccccccceeccccccccccCCCcceeccccccC----HHHHHHHH---h
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMGL----FCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG----KILSREIL---F  716 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~lal----~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG----~~~a~e~l---l  716 (829)
                      ....|+|+.|-|.++|||+..+.    .+|++++.++++++.-...-      +....+.+.+.    ...++.-.   +
T Consensus       386 ~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~v~~pe~------a~~i~~~~~l~~~~~~~~~~~~~~~~~  459 (512)
T TIGR01117       386 EATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIAVMGPAG------AANIIFRKDIKEAKDPAATRKQKIAEY  459 (512)
T ss_pred             hCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEeecCHHH------HHHHHhhhhcccccCHHHHHHHHHHHH
Confidence            36899999999999988754332    38998888777665533221      11111111111    11111111   1


Q ss_pred             cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        717 TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       717 ~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                      .-+..++..+.+.|+||.|+++.++.....+..+.+.
T Consensus       460 ~~~~~~~~~~a~~g~vD~VI~P~~tR~~l~~~l~~~~  496 (512)
T TIGR01117       460 REEFANPYKAAARGYVDDVIEPKQTRPKIVNALAMLE  496 (512)
T ss_pred             HHhhcCHHHHHhcCCCCeeEChHHHHHHHHHHHHHHh
Confidence            1234478899999999999999999887777666544

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=90.62  E-value=0.39  Score=55.89  Aligned_cols=81  Identities=16%  Similarity=0.265  Sum_probs=53.9

Q ss_pred             CCCEEEEecccccchhhhhhhccccccccccc-eeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH--
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEES-VYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL--  726 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a-~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA--  726 (829)
                      ..|.|+++.|+|.||+......|||+|+.+++ .+.+.                    |+...+.  .+|+.+++++.  
T Consensus       154 ~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a--------------------GP~vv~~--~~Ge~v~~e~lGG  211 (512)
T TIGR01117       154 VVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT--------------------GPQVIKT--VTGEEVTAEQLGG  211 (512)
T ss_pred             CCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec--------------------ChHHHHh--hcCcccchhhcch
Confidence            47999999999999998777799999999863 33331                    2222222  34555555554  


Q ss_pred             -----HHcCCcccccCh-hhHHHHHHHHHHHH
Q psy11396        727 -----KERGISMPVLPR-KQVLFYSLKLAKKL  752 (829)
Q Consensus       727 -----~~~GLv~~v~~~-~~l~~~~~~~a~~i  752 (829)
                           ..-|++|.+++. ++..+.+++++.-+
T Consensus       212 a~~h~~~sGv~d~~~~de~ea~~~~r~~ls~l  243 (512)
T TIGR01117       212 AMAHNSVSGVAHFIAEDDDDCIMLIRRLLSFL  243 (512)
T ss_pred             HHHhccccceeEEecCChHHHHHHHHHHHHhC
Confidence                 257888888874 44555555555554

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain

Probab=90.22  E-value=0.52  Score=55.29  Aligned_cols=82  Identities=21%  Similarity=0.254  Sum_probs=53.5

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      ...|.|++|.|+|.|||.....+||++|++++ +.+.+                    .|+...+.  .+|+.+++++.-
T Consensus       204 ~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~--------------------aGP~vV~~--~~Ge~v~~eeLG  261 (569)
T PLN02820        204 AGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFL--------------------AGPPLVKA--ATGEEVSAEDLG  261 (569)
T ss_pred             CCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEe--------------------cCHHHHHh--hcCcccCHHHhC
Confidence            56899999999999999999999999999875 43333                    13333332  345666666653


Q ss_pred             -------HcCCcccccChh-hHHHHHHHHHHHH
Q psy11396        728 -------ERGISMPVLPRK-QVLFYSLKLAKKL  752 (829)
Q Consensus       728 -------~~GLv~~v~~~~-~l~~~~~~~a~~i  752 (829)
                             .-|.++.+++.| +....+++++.-|
T Consensus       262 Ga~~h~~~sGv~d~~~~de~~a~~~~R~lls~L  294 (569)
T PLN02820        262 GADVHCKVSGVSDHFAQDELHALAIGRNIVKNL  294 (569)
T ss_pred             CHHHhcccccccccccCchHHHHHHHHHHHHhc
Confidence                   467777777654 2223334444333

>PTZ00171 acyl carrier protein; Provisional

Probab=89.50  E-value=0.42  Score=45.81  Aligned_cols=57  Identities=11%  Similarity=0.134  Sum_probs=47.1

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS   89 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~   89 (829)
                      +.+-+.++++.+++. +++.|.++..|..|+|+ |||..+||--.|+..+|+.+|..-.
T Consensus        71 v~~~l~eiiae~l~v-d~~~I~~ds~~~~dLg~-DSLd~veLv~~LEdeFgI~Ipded~  127 (148)
T PTZ00171         71 VLTRVKKVVKNFEKV-DASKITPESNFVKDLGA-DSLDVVELLIAIEQEFNLTIPDHDA  127 (148)
T ss_pred             HHHHHHHHHHHHhCC-CHhhCCCCcchhhhcCC-CHHHHHHHHHHHHHHHCCccCHHHH
Confidence            445555666666765 46789999999889999 9999999999999999999998643

>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]

Probab=89.20  E-value=0.45  Score=52.93  Aligned_cols=95  Identities=11%  Similarity=0.062  Sum_probs=66.2

Q ss_pred             ccccccCCCCEEEEec---ccccchhhhhhhccccccccccceeccccccccc--cCCCcc--eeccc------ccc--C
Q psy11396        643 YCMPLYCKIPVIAAMQ---GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF--TPGAGS--TLIFP------QRF--G  707 (829)
Q Consensus       643 ~~~~~~~~kp~Iaav~---G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl--~p~~g~--~~~l~------r~i--G  707 (829)
                      ...+...|.|++..|.   ++|..+|..++|+||+..|.+++.++-...-.+-  .+....  ..++.      +.-  .
T Consensus        78 v~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN  157 (436)
T COG1030          78 VRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRN  157 (436)
T ss_pred             HHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCC
Confidence            3445557889777665   4699999999999999999999888876544321  111111  11111      111  2


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ...|.+++.....++++||++.|++|-+..
T Consensus       158 ~~~ae~~v~~~~~l~a~eA~~~~vid~iA~  187 (436)
T COG1030         158 PTWAERFVTENLSLTAEEALRQGVIDLIAR  187 (436)
T ss_pred             hHHHHHHhhhccCCChhHHHhcCccccccC
Confidence            456788888899999999999999998875

>PRK12467 peptide synthase; Provisional

Probab=88.09  E-value=0.58  Score=68.13  Aligned_cols=66  Identities=6%  Similarity=0.029  Sum_probs=58.8

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.++.+.|||.   +.|+++..|. ++|- |||.+++|..+|++..|+.++....|++||...++.+
T Consensus      1031 ~e~~l~~i~~~vL~~---~~i~~~d~Ff-~lGg-dSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~ 1096 (3956)
T PRK12467       1031 LEKRLAAIWADVLKV---ERVGLTDNFF-ELGG-HSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQA 1096 (3956)
T ss_pred             HHHHHHHHHHHHhCC---CCCCCCCCch-hccC-ccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHH
Confidence            456677788889987   4799999999 9999 9999999999999999999999999999998776654

>KOG1748|consensus

Probab=86.94  E-value=0.41  Score=44.09  Aligned_cols=62  Identities=11%  Similarity=0.118  Sum_probs=48.7

Q ss_pred             CCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396         22 INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS   89 (829)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~   89 (829)
                      +..+|+-.+..++|.++=    - -+++++-++..|.+|||+ |||-.||+-=.|+.+.|..+|..-.
T Consensus        49 l~k~~v~~RVl~VVk~~d----k-i~~~k~~~~s~f~~DLGl-DSLD~VEiVMAlEEEFgiEIpd~dA  110 (131)
T KOG1748|consen   49 LAKKEVVDRVLDVVKKFD----K-IDPSKLTTDSDFFKDLGL-DSLDTVEIVMALEEEFGIEIPDEDA  110 (131)
T ss_pred             hhHHHHHHHHHHHHHHhh----c-CCccccchhhHHHHhcCC-cccccchhhhhhHHHhCCccCcchh
Confidence            445566666666665542    2 256779999999999999 9999999999999999999998653

>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=86.56  E-value=0.37  Score=39.29  Aligned_cols=45  Identities=13%  Similarity=0.141  Sum_probs=39.6

Q ss_pred             hhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcC
Q psy11396         34 NNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNS   81 (829)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g   81 (829)
                      .+++++..+|+- ++++++++...+ ++|+ ||+-.+.|..|+++..+
T Consensus         2 ~Lr~~~~~Ll~e-~~~~l~dqeNLi-~~GL-DSiR~M~L~~~wR~~G~   46 (74)
T COG3433           2 ALREQIAELLGE-SVEELDDQENLI-DYGL-DSIRMMALLERWRKRGA   46 (74)
T ss_pred             cHHHHHHHHHcC-ChhhcCchhhHH-Hhch-hHHHHHHHHHHHHHcCC
Confidence            456889999997 789999999999 9999 99999999999996544

>PRK12316 peptide synthase; Provisional

Probab=86.44  E-value=0.65  Score=69.13  Aligned_cols=66  Identities=5%  Similarity=0.033  Sum_probs=57.7

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+....+.|||.+   .|+.+..|. ++|. |||+|++|.++|++..|+.++....|++||...++..
T Consensus      2517 ~e~~l~~iw~~vL~~~---~i~~~d~Ff-~lGg-dSl~a~~l~~~~~~~~g~~l~~~~~f~~~ti~~la~~ 2582 (5163)
T PRK12316       2517 LEQRLAAIWQAVLKVE---QVGLDDHFF-ELGG-HSLLATQVVSRVRQDLGLEVPLRILFERPTLAAFAAS 2582 (5163)
T ss_pred             HHHHHHHHHHHHhCCC---ccCCCCchh-hhcc-hHHHHHHHHHHHHHHhCCCcCHHHHhhCccHHHHhhh
Confidence            3455667778899983   699999999 9999 9999999999999999999999999999998776543

>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]

Probab=86.35  E-value=1.4  Score=45.84  Aligned_cols=92  Identities=14%  Similarity=0.115  Sum_probs=65.6

Q ss_pred             CCCCEEEEecccccchh-hhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        649 CKIPVIAAMQGHAIGAG-WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG-~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      -..|.|..+..+..||= ..+++.-|+.|+-+.|.++|...++=       -+++...++.         | -=+++-.+
T Consensus       194 a~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRVI-------EQTire~LPe---------g-fQ~aEfLl  256 (294)
T COG0777         194 AGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRVI-------EQTIREKLPE---------G-FQTAEFLL  256 (294)
T ss_pred             cCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchhh-------hhhhcccCCc---------c-hhhHHHHH
Confidence            57899999999999884 57999999999887777776544320       0111111111         1 12467788


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHHhcCCH
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKLSLLSK  757 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~  757 (829)
                      ++|+||.||++.++......+...+...++
T Consensus       257 ehG~iD~iv~R~elr~tla~ll~~~~~~~~  286 (294)
T COG0777         257 EHGMIDMIVHRDELRTTLASLLAKLTPQPA  286 (294)
T ss_pred             HcCCceeeecHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999888888777765444

>PRK12467 peptide synthase; Provisional

Probab=85.39  E-value=0.46  Score=69.13  Aligned_cols=67  Identities=7%  Similarity=-0.004  Sum_probs=59.9

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      +.+.+..+.+.|||.+   .|+.+..|. |+|. |||++++|..+|++.+|+.++....|++||...++...
T Consensus      3606 ~e~~l~~i~~~vL~~~---~i~~~d~Ff-~lGg-dSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~ 3672 (3956)
T PRK12467       3606 VEQQLAAIWADVLGVE---QVGVTDNFF-ELGG-DSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYS 3672 (3956)
T ss_pred             HHHHHHHHHHHHhCCC---CCCCCcchh-cccc-hHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHH
Confidence            4566778888999974   699999999 9999 99999999999999999999999999999998887653

>PRK05691 peptide synthase; Validated

Probab=84.37  E-value=0.77  Score=67.53  Aligned_cols=66  Identities=6%  Similarity=0.002  Sum_probs=58.4

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.++.+.|||.+   .|+.+..|. ++|= |||.|++|.++|++..|+.++....|++||...++.+
T Consensus      1639 ~e~~l~~iw~~vL~~~---~i~~~d~Ff-~lGG-dSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~~la~~ 1704 (4334)
T PRK05691       1639 LQQQIAAIWREVLGLP---RVGLRDDFF-ALGG-HSLLATQIVSRTRQACDVELPLRALFEASELGAFAEQ 1704 (4334)
T ss_pred             HHHHHHHHHHHHhCCC---CCCCCCchH-Hhcc-cHHHHHHHHHHHHHHhCCCcchhhhhcCCcHHHHHHH
Confidence            4556777889999974   699999999 9999 9999999999999999999999999999998766554

>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated

Probab=83.78  E-value=1.2  Score=37.76  Aligned_cols=56  Identities=7%  Similarity=0.011  Sum_probs=42.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI   88 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~   88 (829)
                      +++-|++.+..+.+.+. ..+.++..+. +.|+-||+.++||--.|+..+|+++|+.-
T Consensus         3 i~~~I~~iL~~~~~~~~-~~~~~d~~l~-~~g~lDSl~~veli~~lE~~fgi~i~~~e   58 (78)
T PRK05087          3 FKEQVLDILEELTGEDI-VSENMDEDLF-EEGILDSMGTVELLVELENRFDIEVPVSE   58 (78)
T ss_pred             HHHHHHHHHHHHhCCCh-hccCCccchh-hccCcchHHHHHHHHHHHHHhCCccChHh
Confidence            44556666666666543 3577888888 66644999999999999999999998864

>PRK05691 peptide synthase; Validated

Probab=81.32  E-value=0.85  Score=67.09  Aligned_cols=68  Identities=9%  Similarity=0.076  Sum_probs=60.2

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      .+++.+.++-+.|||.   +.|+.+..|. ++|- |||+|++|..++++..|+.++..-.|++||...++.+.
T Consensus      4241 ~~e~~l~~iw~~vL~~---~~i~~~d~Ff-~lGg-~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~ 4308 (4334)
T PRK05691       4241 ELEQTLATIWADVLKV---ERVGVHDNFF-ELGG-HSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYI 4308 (4334)
T ss_pred             HHHHHHHHHHHHHhCC---CcCCCCCchh-hcCC-cHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHH
Confidence            3556677788889997   4799999999 9999 99999999999999999999999999999998877654

>TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2

Probab=80.67  E-value=1  Score=37.56  Aligned_cols=53  Identities=9%  Similarity=-0.007  Sum_probs=41.1

Q ss_pred             hhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396         35 NSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS   89 (829)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~   89 (829)
                      ++++...+.|.+.. ...++..+. +.|+-||+..|+|--.|+..+|+.+|++..
T Consensus         4 i~eIL~~i~~~~~~-~~~~d~~L~-~~GllDS~~~v~Li~~lE~ef~I~i~~~el   56 (73)
T TIGR01688         4 VLDILAEVTGSDDV-KENPDLELF-EEGLLDSFGTVQLLLEIQNQFDIDVPISEF   56 (73)
T ss_pred             HHHHHHHHhcCccc-ccCccHHHH-HccchhHHHHHHHHHHHHHHhCCccCHHHc
Confidence            34445555555433 357788888 999889999999999999999999998753

This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein.

>PRK12316 peptide synthase; Provisional

Probab=80.65  E-value=0.88  Score=67.77  Aligned_cols=67  Identities=6%  Similarity=0.010  Sum_probs=59.2

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      +.+.+.+..+.||+.   +.|+++..|. ++|- |||.|++|.++|++..|+.++...+|.+||...++.+.
T Consensus      5073 ~e~~l~~i~~~vL~~---~~i~~~~~Ff-~lGg-dSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~ 5139 (5163)
T PRK12316       5073 LEQQVAAIWAEVLQL---ERVGLDDNFF-ELGG-HSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELA 5139 (5163)
T ss_pred             HHHHHHHHHHHHhCC---CCCCCCCChh-hccc-hHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHH
Confidence            455666777888986   4699999999 9999 99999999999999999999999999999998887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	829
2qo3_A	915	Crystal Structure Of [ks3][at3] Didomain From Modul		4e-85
2hg4_A	917	Structure Of The Ketosynthase-acyltransferase Didom		1e-79
3hhd_A	965	Structure Of The Human Fatty Acid Synthase Ks-Mat D		1e-66
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		4e-65
2q35_A	243	Crystal Structure Of The Y82f Variant Of Ech2 Decar		5e-37
2q2x_A	243	Crystal Structure Of The Ech2 Decarboxylase Domain		4e-35
1tqy_A	424	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		3e-25
2iwy_A	438	Human Mitochondrial Beta-ketoacyl Acp Synthase Leng		2e-24
2gqd_A	437	The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii		1e-23
2c9h_A	444	Structure Of Mitochondrial Beta-Ketoacyl Synthase L		3e-23
1j3n_A	408	Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei		9e-23
3kzu_A	428	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-21
2gp6_A	434	X-Ray Crystal Structure Of Mycobacterium Tuberculos		7e-21
1w0i_A	431	Arabidopsis Thaliana Mitochondrial Kas Length = 431		3e-20
1b3n_A	412	Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta		1e-19
2gfw_A	427	Structure Of Wild Type E. Coli Fabf (Kasii) Length		1e-19
3e60_A	424	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-19
2gfy_A	427	Structure Of E. Coli Fabf(K335a) Mutant With Covale		5e-19
3o04_A	413	Crystal Structure Of The Beta-Keto-Acyl Carrier Pro		7e-19
3hnz_A	427	Structure Of E. Coli Fabf(C163a) In Complex With Pl		1e-18
1e5m_A	416	Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas		1e-18
2gfv_A	427	Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng		2e-18
2wgd_A	416	Crystal Structure Of Kasa Of Mycobacterium Tubercul		5e-17
1fj4_A	406	The Structure Of Beta-Ketoacyl-[acyl Carrier Protei		5e-17
1dd8_A	406	Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr		6e-17
1h4f_A	406	E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha		8e-17
4ewg_A	412	Crystal Structure Of A Beta-Ketoacyl Synthase From		2e-16
2byw_A	418	Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C		2e-16
2byz_A	418	Structure Of E. Coli Kas I H298q Mutant In Complex		4e-16
2byy_A	418	E. Coli Kas I H298e Mutation Length = 418		5e-16
2wgf_A	416	Crystal Structure Of Mycobacterium Tuberculosis C17		1e-15
3oyt_A	410	1.84 Angstrom Resolution Crystal Structure Of 3-Oxo		1e-15
1ek4_A	418	Beta-Ketoacyl [acyl Carrier Protein] Synthase I In		1e-14
1f91_A	406	Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In		1e-14
2vb7_C	406	Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap		1e-14
3u0f_A	411	The Structure Of Beta-Ketoacyl Synthase From Brucel		2e-14
3lrf_A	428	Crystal Structure Of Beta-Ketoacyl Synthase From Br		2e-14
1ox0_A	430	The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie		5e-14
2rjt_A	428	Crystal Structure Analysis Of A Surface Entropy Red		8e-14
1tqy_B	415	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		4e-13
2alm_A	431	Crystal Structure Analysis Of A Mutant Beta-Ketoacy		1e-12
4ddo_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		3e-12
3qxz_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		4e-12
4f32_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		5e-11
3h81_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		1e-10
3q0j_A	258	Crystal Structure Of The Mycobacterium Tuberculosis		2e-09
3pzk_A	257	Crystal Structure Of The Mycobacterium Tuberculosis		2e-09
3moy_A	263	Crystal Structure Of Probable Enoyl-Coa Hydratase F		2e-09
3kqf_A	265	1.8 Angstrom Resolution Crystal Structure Of Enoyl-		2e-09
4fzw_A	258	Crystal Structure Of The Paaf-paag Hydratase-isomer		3e-09
2pbp_A	258	Crystal Structure Of Enoyl-Coa Hydrates Subunit I (		3e-09
2hw5_A	286	The Crystal Structure Of Human Enoyl-Coenzyme A (Co		3e-09
1dub_A	261	2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph		4e-09
1mj3_A	260	Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata		4e-09
1ey3_A	258	Structure Of Enoyl-Coa Hydratase Complexed With The		4e-09
3qyr_A	253	Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M		5e-09
3p85_A	270	Crystal Structure Enoyl-Coa Hydratase From Mycobact		5e-09
2gtr_A	261	Human Chromodomain Y-Like Protein Length = 261		3e-08
2fw2_A	260	Catalytic Domain Of Cdy Length = 260		7e-08
2fbm_A	291	Acetyltransferase Domain Of Cdy1 Length = 291		8e-08
3trr_A	256	Crystal Structure Of A Probable Enoyl-Coa Hydratase		1e-07
3pe8_A	256	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		1e-06
3p5m_A	255	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		5e-06
1dci_A	275	Dienoyl-Coa Isomerase Length = 275		6e-06
3pea_A	261	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		6e-06
3rrv_A	276	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		7e-06
2vre_A	296	Crystal Structure Of Human Peroxisomal Delta3,5, De		7e-06
3t88_A	289	Crystal Structure Of Escherichia Coli Menb In Compl		1e-05
2uzf_A	273	Crystal Structure Of Staphylococcus Aureus 1,4-Dihy		1e-05
4els_A	285	Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Co		1e-05
3r9q_A	262	Structure Of A Probable Enoyl-Coa HydrataseISOMERAS		2e-05
2iex_A	272	Crystal Structure Of Dihydroxynapthoic Acid Synthet		3e-05
3hrx_A	254	Crystal Structure Of Phenylacetic Acid Degradation		3e-05
3qka_A	261	Crystal Structure Of Enoyl-Coa Hydratase Echa5 From		4e-05
2j5g_D	263	The Native Structure Of A Beta-Diketone Hydrolase F		4e-05
2j5g_A	263	The Native Structure Of A Beta-Diketone Hydrolase F		4e-05
3zen_D	3089	Cryo-em Structure Of The Mycobacterial Fatty Acid S		4e-05
3fdu_A	266	Crystal Structure Of A Putative Enoyl-Coa Hydratase		5e-05
3q1t_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		6e-05
3m6m_A	305	Crystal Structure Of Rpff Complexed With Rec Domain		7e-05
3h02_A	288	2.15 Angstrom Resolution Crystal Structure Of Napht		9e-05
3sll_A	290	Crystal Structure Of A Probable Enoyl-Coa Hydratase		1e-04
3r0o_A	273	Crystal Structure Of Carnitinyl-Coa Hydratase From		2e-04
2vx2_A	287	Crystal Structure Of Human Enoyl Coenzyme A Hydrata		2e-04
3hin_A	275	Crystal Structure Of Putative Enoyl-Coa Hydratase F		2e-04
4eml_A	275	Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoy		3e-04
1wdk_A	715	Fatty Acid Beta-Oxidation Multienzyme Complex From		5e-04
3t3w_A	279	Crystal Structure Of Probable Enoyl-Coa Hydratase F		6e-04
3r9s_A	267	Structure Of A Carnitinyl-Coa Dehydratase From Myco		6e-04
3qk8_A	272	Crystal Structure Of Enoyl-Coa Hydratase Echa15 Fro		6e-04
3r9t_A	267	Structure Of Echa1_1 From Mycobacterium Paratubercu		7e-04
1szo_A	257	Crystal Structure Analysis Of The 6-Oxo Camphor Hyd		8e-04

>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915

Iteration: 1
 Score =  312 bits (800), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 158/473 (33%), Positives = 259/473 (54%), Gaps = 5/473 (1%)
Query: 112 INNDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGK 169
           + +D IAI+ ++ + P   N  ++ W  L  G   +S  P+ R W +   +  D +  G 
Sbjct: 3   LESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGT 62
Query: 170 TICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLC 229
           +   K G L+D   FD  FF +SP EA  MDPQQRL L+  W  +E+AG +P SL G+  
Sbjct: 63  SYVDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTAT 122
Query: 230 GVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLV 289
           GVF+G A   Y +     +    Y++ G + ++   R+SY + L+GP +++DTACSSSLV
Sbjct: 123 GVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLV 182
Query: 290 AIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGE 349
           A+  A +SL  G S +A+ GG  ++ TP + +  S+   L+ DG   +F   A+GF   E
Sbjct: 183 ALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSE 242
Query: 350 GVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN 409
           GV +               +  +++G  +NQDG +NG++AP+  +Q R+  +  +   + 
Sbjct: 243 GVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLE 302
Query: 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469
           P D+  +EAHGTGT LGDPIE  AL +++ +         LGSVKSNIGH+  AAGV G+
Sbjct: 303 PGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGL 362
Query: 470 IKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSG 529
           +K++L+L++  LP T++      H+   +    +    + W  + ++ R AA+++FG SG
Sbjct: 363 LKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWR-RGERTRRAAVSAFGISG 421
Query: 530 TNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISK 582
           TNAH+++ E  +         +  P+ +V  +SA++ + L   A  I   + +
Sbjct: 422 TNAHVIVEEAPEREHRETTAHDGRPVPLV--VSARSTAALRAQAAQIAELLER 472

>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917

Iteration: 1
 Score =  294 bits (752), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/508 (32%), Positives = 267/508 (52%), Gaps = 19/508 (3%)
Query: 114 NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
            + IAI+G + +FP   ++ + FW  +  G + +++ P+ R      ++ D +A      
Sbjct: 38  GEPIAIVGXACRFPGDVDSPESFWEFVSGGGDAIAEAPADR-----GWEPDPDA------ 86
Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
           +  G L     FD  FF ISP EA   DPQQR+ L+  W  +E AG++P SL GS  GVF
Sbjct: 87  RLGGXLAAAGDFDAGFFGISPREALAXDPQQRIXLEISWEALERAGHDPVSLRGSATGVF 146
Query: 233 VGCAVSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
            G    DY     + P     Y   G + S+   RV+Y L L+GP   +DTACSS L A+
Sbjct: 147 TGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAXTVDTACSSGLTAL 206
Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
             A +SL      +ALAGGV + ++P    +    G L+ DG C  F + A+GF   EG 
Sbjct: 207 HLAXESLRRDECGLALAGGVTVXSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGA 266
Query: 352 GVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
           GV               +  +++G  VNQDG +NG+TAP+  +Q R+  +  +   +   
Sbjct: 267 GVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAG 326
Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
           D+  +EAHGTGT+LGDPIE  AL  ++       +   +GSVKSNIGH+  AAGV G+ K
Sbjct: 327 DVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVXK 386
Query: 472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
            +L+L+H   P T++++  +  I+ +     + ++ +SW    + +R A ++SFG SGTN
Sbjct: 387 AVLALRHGEXPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRR-AGVSSFGISGTN 445
Query: 532 AHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVK 591
           AH+++ E  + +E      +  P+ +V  LS ++       A  + ++++++ +NS    
Sbjct: 446 AHVIVEEAPEADEPEPAPDSG-PVPLV--LSGRDEQAXRAQAGRLADHLAREPRNSLRDT 502
Query: 592 GITDAFSYINSSVQYKVIIITGYENYFA 619
           G T   +   S+ +++ +++   +   A
Sbjct: 503 GFT--LATRRSAWEHRAVVVGDRDEALA 528

>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965

Iteration: 1
 Score =  251 bits (641), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/427 (32%), Positives = 234/427 (54%), Gaps = 25/427 (5%)
Query: 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
             +++ I G+SG+ P++ N+++FW+NL+ G + V+         DD  D    A    + 
Sbjct: 2   TGEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVT---------DD--DRRWKAGLYGLP 50
Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
           ++ G L+D+  FD  FF + P +A  MDPQ RL L+  +  I D G NP SL G+  GV+
Sbjct: 51  RRSGKLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVW 110
Query: 233 VGCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
           VG + S+ ++ ++ DP+    Y+++G   +++  R+S+F + +GP +A+DTACSSSL+A+
Sbjct: 111 VGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMAL 170
Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
            +A  ++  G    A+ GG+ ++  P+  ++  + GMLSP+G C +FD   NG+   EGV
Sbjct: 171 QNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGV 230
Query: 352 GVXXXXXXXXXXXXXXXIYCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINP 410
                            +Y  I   G N DG K  G+T P+   Q +L   +Y+   + P
Sbjct: 231 ----VAVLLTKKSLARRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAP 286
Query: 411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470
              + +EAHGTGTK+GDP E   +  +    +  +    +GS KSN+GH   A+G+  + 
Sbjct: 287 ESFEYIEAHGTGTKVGDPQELNGITRAL--CATRQEPLLIGSTKSNMGHPEPASGLAALA 344
Query: 471 KIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK-NKKKRMAAINSFGFSG 529
           K++LSL+H +  P ++++  N  I     P  ++ + +  D     +     INSFGF G
Sbjct: 345 KVLLSLEHGLWAPNLHFHSPNPEI-----PALLDGRLQVVDQPLPVRGGNVGINSFGFGG 399
Query: 530 TNAHIVL 536
           +N HI+L
Sbjct: 400 SNVHIIL 406

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score =  246 bits (628), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 146/432 (33%), Positives = 229/432 (53%), Gaps = 39/432 (9%)
Query: 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
           +++ I G+SG+ P++ N+++FW NL+ G + V+     RW           A    + ++
Sbjct: 2   EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTA-DDRRW----------KAGLYGLPRR 50
Query: 175 MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
           MG L+D+  FD  FF +   +A  MDPQ R+ L+  +  I D G NP SL G+  GV+VG
Sbjct: 51  MGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVG 110
Query: 235 CAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
            + SD ++ ++ DP+    Y+++G   +++  R+S+F + +GP + IDTACSSSL+A+  
Sbjct: 111 VSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQS 170
Query: 294 ACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353
           A  ++  G    A+ GG+ ++  P+  ++  K GMLS DG C SFD    G+   E V  
Sbjct: 171 AYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAV-- 228
Query: 354 XXXXXXXXXXXXXXXIYCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPND 412
                          +Y  I   G N DG K  G+T P+   Q +L   +Y     +P  
Sbjct: 229 --VAVLLTKKSLARRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPES 286
Query: 413 IQLLEAHGTGTKLGDPIEF----EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
           ++ +EAHGTGTK+GDP E      ALC +       +    +GS KSN+GH   A+GV  
Sbjct: 287 LEYIEAHGTGTKVGDPQELNGIVNALCAT------RREPLLIGSTKSNMGHPEPASGVAA 340
Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD----IKNKKKRMAAINS 524
           +IK++LSL+H V  P ++Y+  N  I     P   + + +  D    I+        INS
Sbjct: 341 LIKVLLSLEHGVWAPNLHYHTPNPEI-----PALQDGRLQVVDRPLPIRGGN---VGINS 392
Query: 525 FGFSGTNAHIVL 536
           FGF G+N H++L
Sbjct: 393 FGFGGSNVHVIL 404

>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2 Decarboxylase Domain Of Curf From Lyngbya Majuscula Length = 243

Iteration: 1
 Score =  153 bits (386), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 81/224 (36%), Positives = 130/224 (58%), Gaps = 3/224 (1%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           S++  + ++V+G+   FS +  + QYKV+I+TGY NYF+ G +KE L++  +G     D 
Sbjct: 23  SRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDL 82
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
               + L C+IP+IAAMQGH+ G G  +GL+ D+ +FS+ESVY + +M+YGFTP   ++L
Sbjct: 83  SG--LILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSL 140
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYXXXXXXXXXXXXXXXX 760
           I  ++ G  L++E+++T   ++GKEL ERGI  PV+ R+ VL Y                
Sbjct: 141 ILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSL 200
Query: 761 XXXXXYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804
                + S  ++ K       EL +H  TF N P + + I++ F
Sbjct: 201 VALKQHLSADIKAKFPEAIKKELEIHQVTF-NQPEIASRIQQEF 243

>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf From Lyngbya Majuscula Length = 243

Iteration: 1
 Score =  146 bits (369), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           S++  + ++V+G+   FS +  + QYKV+I+TGY NYF+ G +KE L++  +G     D 
Sbjct: 23  SRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEYLIRKTRGEVEVLDL 82
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
               + L C+IP+IAA QGH+ G G  +GL+ D+ +FS+ESVY + + +YGFTP   ++L
Sbjct: 83  SG--LILDCEIPIIAAXQGHSFGGGLLLGLYADFVVFSQESVYATNFXKYGFTPVGATSL 140
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYXXXXXXXXXXXXXXXX 760
           I  ++ G  L++E ++T   ++GKEL ERGI  PV+ R+ VL Y                
Sbjct: 141 ILREKLGSELAQEXIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSL 200
Query: 761 XXXXXYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804
                + S  ++ K       EL +H  TF N P + + I++ F
Sbjct: 201 VALKQHLSADIKAKFPEAIKKELEIHQVTF-NQPEIASRIQQEF 243

>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424

Iteration: 1
 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/448 (21%), Positives = 176/448 (39%), Gaps = 62/448 (13%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + I G+  + P  N  ++FW  L  GR    +I         F+D            ++ 
Sbjct: 5   VVITGVGVRAPGGNGTRQFWELLTSGRTATRRI--------SFFDP------SPYRSQVA 50
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
           +  D   FDP+     P E + MD   +  +         +G +P +L  +  GV +G A
Sbjct: 51  AEAD---FDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 107
Query: 237 VSDYNKLITDPKMYNAYALMGES--------------------VSILPARVSYFLNLQGP 276
           V+    L  +      Y L+ +S                     S++PA V++ +  +GP
Sbjct: 108 VAAATSLERE------YLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGP 161
Query: 277 CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----HIKMSKSGMLSP 331
              + T C+S L ++ +A  ++  G++ +  AG      TP +      I+ + +    P
Sbjct: 162 VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDP 221
Query: 332 DGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDG-KTNGITAP 390
           +     FD   +GFV  EG  +               I+  I G+    +     G+ A 
Sbjct: 222 EHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKAD 281
Query: 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450
             +    ++  +  +   +  DI  + AHG+GT+  D  E  A   +  +   H     +
Sbjct: 282 GREMAETIRVAL-DESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGE---HARRTPV 337
Query: 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW 510
            S+KS +GHS  A G + +   +L+L+H V+PPT N    +    L+  P          
Sbjct: 338 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPL--------- 388
Query: 511 DIKNKKKRMAAINSFGFSGTNAHIVLME 538
           + + +K R       GF G  + +VL +
Sbjct: 389 EARERKLRSVLTVGSGFGGFQSAMVLRD 416

>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438

Iteration: 1
 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 17/283 (6%)
Query: 260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
           V++   +VS    L+GP  A+ TAC++   A+  +   +  G++ + +AGG     +P  
Sbjct: 164 VNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLS 223
Query: 320 HIKMSKSGMLS----PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKG 375
               S++  LS    P   C  F  + +GFV GEG  V               IY  + G
Sbjct: 224 LAGFSRARALSTNSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLG 283
Query: 376 WGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433
           +G++ D     ITAP+ + +  +R      K   + P +I  + AH T T LGD  E +A
Sbjct: 284 YGLSGD--AGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKA 341
Query: 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
           +   F   +Y     A+ S K   GH   AAG +      L+  ++ LPPT+N +     
Sbjct: 342 IKHLFKDHAY---ALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPE 398
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
             L   P     K + W  K +K+ +   NSFGF GTNA + +
Sbjct: 399 FDLNYVPL----KAQEW--KTEKRFIGLTNSFGFGGTNATLCI 435

>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437

Iteration: 1
 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 173/439 (39%), Gaps = 47/439 (10%)
Query: 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
            N  + I G+    P  N+VK  W N L G N + KI  TR   + +             
Sbjct: 26  QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKI--TRIDTEPYS-----------V 72
Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
              G L++  I D    +I   EA  MD   +  +      ++DA  +    +    GV+
Sbjct: 73  HLAGELKNFNIED----HIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVW 128
Query: 233 VGCAVSDY------NKLITD--PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTAC 284
           +G  +         +K + D  P+  + + +      +   +VS  L  +GP  A  TAC
Sbjct: 129 IGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTAC 188
Query: 285 SSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKM---SKSGMLSP----DGHCYS 337
           ++   +I  A   +  G++   + GG      P  H+ +   S S  LS     +  C  
Sbjct: 189 ATGTNSIGEAFKIVQRGDADAMITGGT---EAPITHMAIAGFSASRALSTNDDIETACRP 245
Query: 338 FDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIR 397
           F +  +GFV GEG G+               IY  I G+G   D       AP  +   R
Sbjct: 246 FQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSR 305
Query: 398 LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI 457
                     I P D+Q L AHGT T +GD  E +A+  +F + + H     + S KS  
Sbjct: 306 AMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKH---LKVSSTKSMT 362
Query: 458 GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKK 517
           GH   A G I  I   LS+K   + PTI+    +    L+  P     + +  DI     
Sbjct: 363 GHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP----NEAQDLDIT---- 414
Query: 518 RMAAINSFGFSGTNAHIVL 536
             A  NS GF G NA +V 
Sbjct: 415 -YAMSNSLGFGGHNAVLVF 432

>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444

Iteration: 1
 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 17/283 (6%)
Query: 260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
           V++   +VS    L+GP  A+ TA ++   A+  +   +  G++ + +AGG     +P  
Sbjct: 170 VNMAAGQVSIRYKLKGPNHAVSTAXTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLS 229
Query: 320 HIKMSKSGMLS----PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKG 375
               S++  LS    P   C  F  + +GFV GEG  V               IY  + G
Sbjct: 230 LAGFSRARALSTNSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLG 289
Query: 376 WGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433
           +G++ D     ITAP+ + +  +R      K   + P +I  + AH T T LGD  E +A
Sbjct: 290 YGLSGD--AGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKA 347
Query: 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
           +   F   +Y     A+ S K   GH   AAG +      L+  ++ LPPT+N +     
Sbjct: 348 IKHLFKDHAY---ALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPE 404
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
             L   P     K + W  K +K+ +   NSFGF GTNA + +
Sbjct: 405 FDLNYVPL----KAQEW--KTEKRFIGLTNSFGFGGTNATLCI 441

>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408

Iteration: 1
 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 160/429 (37%), Gaps = 44/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P     + F    L G++ V   P TR+        D +A+   I  ++ 
Sbjct: 4   VVVTGLGALTPIGVGQEAFHKAQLAGKSGVR--PITRF--------DASALPVRIAAEV- 52
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
              D+   DP  + +   E   +D   +  L      +EDAG  P  L     G  VG  
Sbjct: 53  ---DV---DPGAY-LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTG 105
Query: 237 VSDYNK--------LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
           +             L   P   + + +     ++  A ++      GP   + TAC++  
Sbjct: 106 IGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGA 165
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
            A+  A   + LG + + LAGG     TP      +    LS     P+     F    +
Sbjct: 166 DALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
           GFV GEG GV               IY  + G+G + D        P  K       +  
Sbjct: 226 GFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARAL 285
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
           K   I P  +  + AHGT T +GD  E  A+   F     H     + S KS IGH   A
Sbjct: 286 KDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGD---HAKRLMVSSTKSMIGHLLGA 342
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           AG +  I  + +L H V+PPTIN    +  + L+  P          + +  K   A  N
Sbjct: 343 AGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP----------EPREAKVDYALSN 392
Query: 524 SFGFSGTNA 532
           SF F G NA
Sbjct: 393 SFAFGGHNA 401

>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 183/440 (41%), Gaps = 48/440 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + I G+    P A+ V++ W  LL G +   ++  T + +DD          +  C+   
Sbjct: 12  VVITGLGLVSPLASGVEETWKRLLAGESGARRV--TEFEVDDLA-------CQIACRIPV 62
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP---------FSLSGS 227
                  F+P   ++ P E   +DP     +      ++DAG++P           L GS
Sbjct: 63  GDGTNGTFNP-DLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGS 121
Query: 228 LCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
             G   G   + Y      P+  + + + G  +++    VS    L+GP  ++ TAC++ 
Sbjct: 122 GIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATG 181
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK---------MSKSGMLSPDGHCYSF 338
             AI  A   +  G++ + +AGG     +P   I          +S      P      +
Sbjct: 182 THAIGDAARLIAFGDADVMVAGGT---ESPVSRISLAGFAACKALSTERNDDPTAASRPY 238
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQ--I 396
           D+  +GFV GEG G+               IY  + G+G++  G    ITAP    +   
Sbjct: 239 DEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMS--GDAFHITAPTESGEGAQ 296
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
           R      K+  I P++I  + AHGT T + D IE  A+     + +      ++ S KS+
Sbjct: 297 RCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAK---ISMSSTKSS 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
           IGH   AAG    +   L+++  + P T+N +      +++  P            + +K
Sbjct: 353 IGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPH---------KPRERK 403
Query: 517 KRMAAINSFGFSGTNAHIVL 536
             +A  NSFGF GTNA +VL
Sbjct: 404 IDVALSNSFGFGGTNASLVL 423

>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434

Iteration: 1
 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 282 TACSSSLVAIAHACDSLILGNSKIALAGGVY-------IINTPDIHIKMSKSGMLSPDGH 334
           +AC+S   AIA A   ++LG +  A+ GGV        I     + I MS +    P G 
Sbjct: 185 SACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNND-DPAGA 243
Query: 335 CYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKS 394
           C  FD+  +GFV GEG  +               I   I G  +  DG       PN + 
Sbjct: 244 CRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGER 303
Query: 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVK 454
                T+  +   + P DI  + AH TGT++GD  E  A+  +        N  A+ + K
Sbjct: 304 AGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGG-----NRPAVYAPK 358
Query: 455 SNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN 514
           S +GHS  A G +  I  +L+L+ +V+PPT+N   L+  I L+           + + + 
Sbjct: 359 SALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLD---------VVAGEPRP 409
Query: 515 KKKRMAAINSFGFSGTNAHIV 535
              R A  NSFGF G N  I 
Sbjct: 410 GNYRYAINNSFGFGGHNVAIA 430

>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 119/285 (41%), Gaps = 19/285 (6%)
Query: 260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
           V++    VS     QGP  A  TAC++   +I  A   +  G++ + +AGG         
Sbjct: 155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS 214
Query: 320 HIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCII 373
               S+S  LS      P      FD   +GFV GEG GV               IY  +
Sbjct: 215 VAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAEL 274
Query: 374 KGWGVNQDGKTNGITAP--NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEF 431
            G+G++  G  + IT P  + K  +   T+  ++  + PN I  + AH T T +GD +E 
Sbjct: 275 CGYGMS--GDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEA 332
Query: 432 EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN 491
            A+   F++ +      A  S K   GH   AAG +  I  IL++ H V P T+N     
Sbjct: 333 RAIKTVFSEHATSGTL-AFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVK--- 388
Query: 492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
                   P F          K    R A  NSFGF GTNA ++ 
Sbjct: 389 -----NPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLF 428

>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 45/435 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P  N V+  W  LL G++ +S I        D +D+   A       K  
Sbjct: 5   VVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAGLVKDF 56
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSGSLCGV 231
           + EDI         IS  E   MD   +  +      ++D+G      N   +  ++   
Sbjct: 57  NCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSG 107
Query: 232 FVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
             G  + + N    +   P+  + + +    V+++   ++    L+GP ++I TAC+S +
Sbjct: 108 IGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGV 167
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
             I HA   +  G++ + +AGG    +TP        +  LS     P      +D+  +
Sbjct: 168 HNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERD 227
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTK 401
           GFV G+G G+               IY  + G+G++ D     +T+P  N          
Sbjct: 228 GFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAALAMAN 285
Query: 402 IYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSA 461
             +   I  + I  + AHGT T  GD  E +A+   F + +       + S KS  GH  
Sbjct: 286 ALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSMTGHLL 342
Query: 462 TAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAA 521
            AAG +  I  IL+L+ + +PPTIN +  +E   L+  P       ++  +   +  +  
Sbjct: 343 GAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGMEYTL-- 394
Query: 522 INSFGFSGTNAHIVL 536
            NSFGF GTN  ++ 
Sbjct: 395 CNSFGFGGTNGSLIF 409

>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 182/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
           ++   + + G+    P  N V+  W  LL G++ +S I        D +D+   A     
Sbjct: 15  VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
             K  + EDI         IS  E   MD   +  +      ++D+G      N   +  
Sbjct: 67  LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
           ++     G  + + N    +   P+  + + +    V+++   ++    L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
           C+S +  I HA   +  G++ + +AGG    +TP        +  LS     P      +
Sbjct: 178 CTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
           D+  +GFV G+G G+               IY  + G+G++ D     +T+P  N     
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
                  +   I  + I  + AHGT T  GD  E +A+   F + +       + S KS 
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
            GH   AAG +  I  IL+L+ + +PPTIN +  +E   L+  P       ++  +   +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
             +   NSFGF GTN  ++ 
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424

>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 139/303 (45%), Gaps = 33/303 (10%)
Query: 247 PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIA 306
           P+  + + + G  +++    VS    L+GP  ++ TACS+   AI  A   + LG++ + 
Sbjct: 137 PRRISPFFIPGRLINLASGYVSIKYGLRGPNHSVVTACSTGAHAIGDAARLIALGDADVM 196
Query: 307 LAGGVYIINTPDIHIKM---SKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXX 357
           LAGG     +P   I +   S    LS      P+     +D   +GFV GEG  +    
Sbjct: 197 LAGGT---ESPINRISLAGFSACRALSTCRNDDPERASRPYDVDRDGFVMGEGAAIVVLE 253
Query: 358 XXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQL 415
                      IY  I G+G++ D     ITAP+   +   R      K+  +N +++  
Sbjct: 254 ELEHAKKRGARIYAEIIGYGLSGDAYH--ITAPSESGEGAQRSMMAALKRAQVNVSELDY 311
Query: 416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILS 475
           + AHGT T + D IE  A+        Y+    ++ S KS+IGH   AAG    I  +L+
Sbjct: 312 INAHGTST-MADVIELAAVERVLG---YYAPQVSMSSTKSSIGHLLGAAGAAEAIFCVLA 367
Query: 476 LKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI--NSFGFSGTNAH 533
           ++  + P T+N         LEN    I TK      K +++++  +  NSFGF GTNA 
Sbjct: 368 IRDNIAPATLN---------LENPS--IETKIDLVPHKPRERKIDTVLSNSFGFGGTNAS 416
Query: 534 IVL 536
           +V+
Sbjct: 417 LVM 419

>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
           ++   + + G+    P  N V+  W  LL G++ +S I        D +D+   A     
Sbjct: 15  VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
             K  + EDI         IS  E   MD   +  +      ++D+G      N   +  
Sbjct: 67  LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
           ++     G  + + N    +   P+  + + +    V+++   ++    L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
           C+S +  I HA   +  G++ + +AGG    +TP        +  LS     P      +
Sbjct: 178 CTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
           D+  +GFV G+G G+               IY  + G+G++ D     +T+P  N     
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
                  +   I  + I  + AHGT T  GD  E +A+   F + +       + S  S 
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTASM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
            GH   AAG +  I  IL+L+ + +PPTIN +  +E   L+  P       ++  +   +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
             +   NSFGF GTN  ++ 
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424

>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 168/432 (38%), Gaps = 41/432 (9%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + GI    P  N+ +  W N   G N V+K   TR   DDF             K   
Sbjct: 6   VVVTGIGAVTPIGNDAETSWENAKKGVNGVAK--XTRLNPDDFP-----------VKIAA 52
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            L+D ++   L       EA   D      + +    ++D+G      + +  GV++G  
Sbjct: 53  ELKDFDVEKYL----EKKEARKXDRFTHYAIASAEXAVQDSGLVIDDSNANRVGVWIGSG 108
Query: 237 VSDYNKLITDPKMYNAYALMGESVSILP--------ARVSYFLNLQGPCLAIDTACSSSL 288
           +       T  +++        S   +P         +VS     +G      TAC+++ 
Sbjct: 109 IGGXETFETQYEIFLNRGHRRVSPFFVPXXIPDXGSGQVSIRFGAKGINSTTVTACATAT 168
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFDQRANG 344
            +I  A   +  G++   + GG     T       + +  LS    P+  C  FD+  +G
Sbjct: 169 NSIGDAFKVIERGDADAXITGGAEAPITKXSLAGFTANKALSLNPDPETACRPFDKDRDG 228
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
           F+ GEG G+               IY  I G+G   D       APN +   R       
Sbjct: 229 FIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAXKXAID 288
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
              + P+ +  + AHGT T   D  E +A+   F +   H    A+ S KS  GH+  A+
Sbjct: 289 DAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGE---HAKKLAISSTKSXTGHTLGAS 345
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
           G I  I  +L+++  ++ PTI+    +E   L+    ++  + +  ++      +   NS
Sbjct: 346 GGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLD----YVPNEAREANVN-----VVISNS 396
Query: 525 FGFSGTNAHIVL 536
           FGF G NA +V 
Sbjct: 397 FGFGGHNATLVF 408

>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
           ++   + + G+    P  N V+  W  LL G++ +S I        D +D+   A     
Sbjct: 15  VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
             K  + EDI         IS  E   MD   +  +      ++D+G      N   +  
Sbjct: 67  LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
           ++     G  + + N    +   P+  + + +    V+++   ++    L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
            +S +  I HA   +  G++ + +AGG    +TP        +  LS     P      +
Sbjct: 178 ATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
           D+  +GFV G+G G+               IY  + G+G++ D     +T+P  N     
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
                  +   I  + I  + AHGT T  GD  E +A+   F + +       + S KS 
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
            GH   AAG +  I  IL+L+ + +PPTIN +  +E   L+  P       ++  +   +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
             +   NSFGF GTN  ++ 
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424

>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 167/433 (38%), Gaps = 42/433 (9%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P  N ++ +W  L+ GRN +   P TR      +D+   A     C+  G
Sbjct: 9   VVVTGLGAITPIGNTLQDYWQGLMEGRNGIG--PITR------FDASDQA-----CRFGG 55
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            ++D   FD   F +   EA+ MD      +      I DA      L+    GV +G  
Sbjct: 56  EVKD---FDATQF-LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTG 111
Query: 237 VS------DYNKLITD--PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
           +       D   ++ D  P   + + +     ++     +  L  +GP     TAC++  
Sbjct: 112 IGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGS 171
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
            AI  A   +  G +K  + GG     TP  +   + +  LS     P      FD+  +
Sbjct: 172 NAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRD 231
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
           GFV GEG G+               IY  + G+ +  D        P+ +   R      
Sbjct: 232 GFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWAL 291
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
           K   + P  +  + AHGT T   D  E  A+ ++    +Y+    A+ S KS  GH    
Sbjct: 292 KDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYN---IAVSSTKSMTGHLLGG 348
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           +G I  +  ++++    +PPTIN    +    L+  P    ++    D+       A  N
Sbjct: 349 SGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPG--QSRALIVDV-------ALSN 399
Query: 524 SFGFSGTNAHIVL 536
           SFGF G N  +  
Sbjct: 400 SFGFGGHNVTLAF 412

>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
           ++   + + G+    P  N V+  W  LL G++ +S I        D +D+   A     
Sbjct: 15  VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
             K  + EDI         IS  E   MD   +  +      ++D+G      N   +  
Sbjct: 67  LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
           ++     G  + + N    +   P+  + + +    V+++   ++    L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
            +S +  I HA   +  G++ + +AGG    +TP        +  LS     P      +
Sbjct: 178 QTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
           D+  +GFV G+G G+               IY  + G+G++ D     +T+P  N     
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
                  +   I  + I  + AHGT T  GD  E +A+   F + +       + S KS 
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
            GH   AAG +  I  IL+L+ + +PPTIN +  +E   L+  P       ++  +   +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
             +   NSFGF GTN  ++ 
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424

>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 161/423 (38%), Gaps = 64/423 (15%)
Query: 131 NVKKFWNNLLIGRNCVSKIPS---TRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPL 187
           +++  W  LL G + +  +     T+W +                K  G L+D    D  
Sbjct: 28  DIESTWKGLLAGESGIHALEDEFVTKWDL--------------AVKIGGHLKDP--VDSH 71
Query: 188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDP 247
              +      Y+    +L     W        +P   +     V VG  +    +++   
Sbjct: 72  MGRLDMRRMSYVQRMGKLLGGQLWESAGSPEVDPDRFA-----VVVGTGLGGAERIVESY 126
Query: 248 KMYNAYALMGESVS------ILPARVSYFLNLQ-GPCLAIDT---ACSSSLVAIAHACDS 297
            + NA       VS      I+P   +  + LQ G    + T   ACSS   AIAHA   
Sbjct: 127 DLMNAGGP--RKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQ 184
Query: 298 LILGNSKIALAGGVY--IINTPDIHIKMSKSGML---SPDGHCYSFDQRANGFVPGEGVG 352
           +++G++ +A+ GGV   I   P     M ++       P+     FD+  +GFV GE   
Sbjct: 185 IVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGA 244
Query: 353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
           +                   + G G+  D       A +     R  T+  +   ++P D
Sbjct: 245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPAD 304
Query: 413 IQLLEAHGTGTKLGDPIEFEAL----CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
           I  + AHGT T +GD  E  A+    C+            A+ + KS +GHS  A G + 
Sbjct: 305 IDHVNAHGTATPIGDAAEANAIRVAGCDQ----------AAVYAPKSALGHSIGAVGALE 354
Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS 528
            +  +L+L+  V+PPT+NY   +  I L+           + + +    R A  NSFGF 
Sbjct: 355 SVLTVLTLRDGVIPPTLNYETPDPEIDLD---------VVAGEPRYGDYRYAVNNSFGFG 405
Query: 529 GTN 531
           G N
Sbjct: 406 GHN 408

>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           K    Y +     S + A ++    + G   +I +AC++S   I +A + + LG   I  
Sbjct: 127 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 186
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
           AGG   +   ++  +    G LS      P+    ++D   +GFV   G G+        
Sbjct: 187 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 245
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
                  IY  I G+G   DG    + AP+ +  +R         +     I  L +HGT
Sbjct: 246 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 300
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
            T +GD  E  A+ E F   S      A+ + K+  GHS  AAGV   I  +L L+H  +
Sbjct: 301 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 355
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
            P+IN   L+E          +N   ++ D   ++      NSFGF GTNA +V M K+K
Sbjct: 356 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 405
Query: 542 N 542
           +
Sbjct: 406 D 406

>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           K    Y +     S + A ++    + G   +I +AC++S   I +A + + LG   I  
Sbjct: 127 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 186
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
           AGG   +   ++  +    G LS      P+    ++D   +GFV   G G+        
Sbjct: 187 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 245
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
                  IY  I G+G   DG    + AP+ +  +R         +     I  L +HGT
Sbjct: 246 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 300
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
            T +GD  E  A+ E F   S      A+ + K+  GHS  AAGV   I  +L L+H  +
Sbjct: 301 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 355
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
            P+IN   L+E          +N   ++ D   ++      NSFGF GTNA +V M K+K
Sbjct: 356 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 405
Query: 542 N 542
           +
Sbjct: 406 D 406

>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           K    Y +     S + A ++    + G   +I +AC++S   I +A + + LG   I  
Sbjct: 127 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 186
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
           AGG   +   ++  +    G LS      P+    ++D   +GFV   G G+        
Sbjct: 187 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 245
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
                  IY  I G+G   DG    + AP+ +  +R         +     I  L +HGT
Sbjct: 246 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 300
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
            T +GD  E  A+ E F   S      A+ + ++  GHS  AAGV   I  +L L+H  +
Sbjct: 301 STPVGDVKELAAIREVFGDKS-----PAISATRAMTGHSLGAAGVQEAIYSLLMLEHGFI 355
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
            P+IN   L+E          +N   ++ D   ++      NSFGF GTNA +V M K+K
Sbjct: 356 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 405
Query: 542 N 542
           +
Sbjct: 406 D 406

>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--KMS 324
           VS F +L+G  +   +AC+S   AI +A +++ +G   + LAGG   ++ P + +   + 
Sbjct: 151 VSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLY 210
Query: 325 KSGMLSPDGHC--YSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDG 382
            +   + + H     FD + +G V GEG                  I+  I G+G N DG
Sbjct: 211 ATSTRNDEPHLTPRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDG 270
Query: 383 KTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFS 442
               +T P   +  R      +   ++ N I  + AHGT T  GD  E +A   +F +  
Sbjct: 271 AH--MTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGE-- 326
Query: 443 YHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502
                  + S+KS +GH+  A G +     I  +K     PT+N   L E          
Sbjct: 327 ----RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLN---LTE---------- 369
Query: 503 INTKCKSWD-IKNKKKRMAA----INSFGFSGTNAHIVL 536
           ++  C   D I+ + + + A     N+F F G N  ++ 
Sbjct: 370 VDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIF 408

>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           K    Y +     S + A ++    + G   +I +AC++S   I +A + + LG   I  
Sbjct: 139 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 198
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
           AGG   +   ++  +    G LS      P+    ++D   +GFV   G G+        
Sbjct: 199 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 257
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
                  IY  I G+G   DG    + AP+ +  +R         +     I  L +HGT
Sbjct: 258 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 312
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
            T +GD  E  A+ E F   S      A+ +  +  GHS  AAGV   I  +L L+H  +
Sbjct: 313 STPVGDVKELAAIREVFGDKS-----PAISATAAMTGHSLGAAGVQEAIYSLLMLEHGFI 367
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
            P+IN   L+E          +N   ++ D   ++      NSFGF GTNA +V M K+K
Sbjct: 368 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 417
Query: 542 N 542
           +
Sbjct: 418 D 418

>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           K    Y +     S + A ++    + G   +I +AC++S   I +A + + LG   I  
Sbjct: 139 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 198
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
           AGG   +   ++  +    G LS      P+    ++D   +GFV   G G+        
Sbjct: 199 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 257
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
                  IY  I G+G   DG    + AP+ +  +R         +     I  L + GT
Sbjct: 258 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSQGT 312
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
            T +GD  E  A+ E F   S      A+ + K+  GHS  AAGV   I  +L L+H  +
Sbjct: 313 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 367
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
            P+IN   L+E          +N   ++ D   ++      NSFGF GTNA +V M K+K
Sbjct: 368 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 417
Query: 542 N 542
           +
Sbjct: 418 D 418

>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
           K    Y +     S + A ++    + G   +I +AC++S   I +A + + LG   I  
Sbjct: 139 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 198
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
           AGG   +   ++  +    G LS      P+    ++D   +GFV   G G+        
Sbjct: 199 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 257
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
                  IY  I G+G   DG    + AP+ +  +R         +     I  L + GT
Sbjct: 258 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSEGT 312
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
            T +GD  E  A+ E F   S      A+ + K+  GHS  AAGV   I  +L L+H  +
Sbjct: 313 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 367
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
            P+IN   L+E          +N   ++ D   ++      NSFGF GTNA +V M K+K
Sbjct: 368 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 417
Query: 542 N 542
           +
Sbjct: 418 D 418

>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 160/423 (37%), Gaps = 64/423 (15%)
Query: 131 NVKKFWNNLLIGRNCVSKIPS---TRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPL 187
           +++  W  LL G + +  +     T+W +                K  G L+D    D  
Sbjct: 28  DIESTWKGLLAGESGIHALEDEFVTKWDL--------------AVKIGGHLKDP--VDSH 71
Query: 188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDP 247
              +      Y+    +L     W        +P   +     V VG  +    +++   
Sbjct: 72  MGRLDMRRMSYVQRMGKLLGGQLWESAGSPEVDPDRFA-----VVVGTGLGGAERIVESY 126
Query: 248 KMYNAYALMGESVS------ILPARVSYFLNLQ-GPCLAIDT---ACSSSLVAIAHACDS 297
            + NA       VS      I+P   +  + LQ G    + T   A SS   AIAHA   
Sbjct: 127 DLMNAGGP--RKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSAQSSGSEAIAHAWRQ 184
Query: 298 LILGNSKIALAGGVY--IINTPDIHIKMSKSGML---SPDGHCYSFDQRANGFVPGEGVG 352
           +++G++ +A+ GGV   I   P     M ++       P+     FD+  +GFV GE   
Sbjct: 185 IVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGA 244
Query: 353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
           +                   + G G+  D       A +     R  T+  +   ++P D
Sbjct: 245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPAD 304
Query: 413 IQLLEAHGTGTKLGDPIEFEAL----CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
           I  + AHGT T +GD  E  A+    C+            A+ + KS +GHS  A G + 
Sbjct: 305 IDHVNAHGTATPIGDAAEANAIRVAGCDQ----------AAVYAPKSALGHSIGAVGALE 354
Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS 528
            +  +L+L+  V+PPT+NY   +  I L+           + + +    R A  NSFGF 
Sbjct: 355 SVLTVLTLRDGVIPPTLNYETPDPEIDLD---------VVAGEPRYGDYRYAVNNSFGFG 405
Query: 529 GTN 531
           G N
Sbjct: 406 GHN 408

>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 125/306 (40%), Gaps = 26/306 (8%)
Query: 236 AVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHAC 295
           A SD  +     K    Y +     S + A ++    ++G   +I +AC++S   I HA 
Sbjct: 119 AGSDAXRTPRGLKGVGPYXVTKAXASGVSACLATPFKIKGVNYSISSACATSAHCIGHAL 178
Query: 296 DSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGE 349
           + + LG   I  AGG   +   +   +    G LS      P     ++DQ  +GFV   
Sbjct: 179 ELIQLGKQDIVFAGGGEEL-CWEXACEFDAXGALSTKYNDTPAKASRTYDQDRDGFVIAG 237
Query: 350 GVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN 409
           G G                IY  I G+G   DG      AP+ +  +R         +  
Sbjct: 238 GGGXVVVEELEHALARGAHIYAEIVGYGATSDGADX--VAPSGEGAVRCXQXAXAGVD-- 293
Query: 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469
              I     HGT T +GD  E  A+ E F       N  A+ S K+  GHS  AAGV   
Sbjct: 294 -TPIDYXNVHGTSTPVGDVKELGAIREVFGN-----NTPAISSTKAXTGHSLGAAGVHEA 347
Query: 470 IKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSG 529
           I  +L ++H  + P+IN + L+E  +  N    I T+    ++          NSFGF G
Sbjct: 348 IFSLLXVEHGFIAPSINIDNLDEQAQGXN----IITETTQRELTTVXS-----NSFGFGG 398
Query: 530 TNAHIV 535
           TNA +V
Sbjct: 399 TNATLV 404

>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 291 IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344
           I +A + + LG   I  AGG   +   ++  +    G LS      P+    ++D   +G
Sbjct: 182 IGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 240
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
           FV   G G+               IY  I G+G   DG    + AP+ +  +R       
Sbjct: 241 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMH 298
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
             +     I  L +HGT T +GD  E  A+ E F   S      A+ + K+  GHS  AA
Sbjct: 299 GVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAA 350
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
           GV   I  +L L+H  + P+IN   L+E          +N   ++ D   ++      NS
Sbjct: 351 GVQEAIYSLLMLEHGFIAPSINIEELDEQAA------GLNIVTETTD---RELTTVMSNS 401
Query: 525 FGFSGTNAHIVLMEKIKN 542
           FGF GTNA +V M K+K+
Sbjct: 402 FGFGGTNATLV-MRKLKD 418

>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 291 IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344
           I +A + + LG   I  AGG   +   ++  +    G LS      P+    ++D   +G
Sbjct: 170 IGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 228
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
           FV   G G+               IY  I G+G   DG    + AP+ +  +R       
Sbjct: 229 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMH 286
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
             +     I  L +HGT T +GD  E  A+ E F   S      A+ + K+  GHS  AA
Sbjct: 287 GVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAA 338
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
           GV   I  +L L+H  + P+IN   L+E          +N   ++ D   ++      NS
Sbjct: 339 GVQEAIYSLLMLEHGFIAPSINIEELDEQAA------GLNIVTETTD---RELTTVMSNS 389
Query: 525 FGFSGTNAHIVLMEKIKN 542
           FGF GTNA +V M K+K+
Sbjct: 390 FGFGGTNATLV-MRKLKD 406

>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 291 IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344
           I +A + + LG   I  AGG   +   ++  +    G LS      P+    ++D   +G
Sbjct: 170 IGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 228
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
           FV   G G+               IY  I G+G   DG    + AP+ +  +R       
Sbjct: 229 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMH 286
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
             +     I  L +HGT T +GD  E  A+ E F   S      A+ + K+  GHS  AA
Sbjct: 287 GVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAA 338
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
           GV   I  +L L+H  + P+IN   L+E          +N   ++ D   ++      NS
Sbjct: 339 GVQEAIYSLLMLEHGFIAPSINIEELDEQAA------GLNIVTETTD---RELTTVMSNS 389
Query: 525 FGFSGTNAHIVLMEKIKN 542
           FGF GTNA +V M K+K+
Sbjct: 390 FGFGGTNATLV-MRKLKD 406

>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 41/343 (11%)
Query: 213 CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD--------PKMYNAYALMGESVSILP 264
            I DAG     +S    G+ +G        ++          PK    +A+     S   
Sbjct: 86  AIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTAS 145
Query: 265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP-----DI 319
           A ++ F  ++G   +I +AC++S   I +A + +  G      AGG   ++       D 
Sbjct: 146 ATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDA 205
Query: 320 HIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVN 379
              MS     +P     ++D+  +GFV   G GV               IY  I G+G  
Sbjct: 206 MGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGAT 265
Query: 380 QDGKTNGITAPNTKSQIR-----LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
            DG    + AP+ +  IR     L T   K   INP        H T T  GD  E EA+
Sbjct: 266 SDGYD--MVAPSGEGAIRCMKMALSTVTSKIDYINP--------HATSTPAGDAPEIEAI 315
Query: 435 CESFNKFSYHKNFC-ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
            + F       + C  + + KS  GHS  A GV   I  +L +++       N+   + H
Sbjct: 316 RQIFGA----GDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQN-------NFICESAH 364
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
           I+ E  P F +       I N +      NSFGF GTNA +V 
Sbjct: 365 IE-ELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVF 406

>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 41/343 (11%)
Query: 213 CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD--------PKMYNAYALMGESVSILP 264
            I DAG     +S    G+ +G        ++          PK    +A+     S   
Sbjct: 103 AIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTAS 162
Query: 265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP-----DI 319
           A ++ F  ++G   +I +AC++S   I +A + +  G      AGG   ++       D 
Sbjct: 163 ATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDA 222
Query: 320 HIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVN 379
              MS     +P     ++D+  +GFV   G GV               IY  I G+G  
Sbjct: 223 MGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGAT 282
Query: 380 QDGKTNGITAPNTKSQIR-----LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
            DG    + AP+ +  IR     L T   K   INP        H T T  GD  E EA+
Sbjct: 283 SDGYD--MVAPSGEGAIRCMKMALSTVTSKIDYINP--------HATSTPAGDAPEIEAI 332
Query: 435 CESFNKFSYHKNFC-ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
            + F       + C  + + KS  GHS  A GV   I  +L +++       N+   + H
Sbjct: 333 RQIFGA----GDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQN-------NFICESAH 381
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
           I+ E  P F +       I N +      NSFGF GTNA +V 
Sbjct: 382 IE-ELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVF 423

>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 151/429 (35%), Gaps = 46/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G     P  N  ++FWN+L  G+  +  I  T++   DF                 
Sbjct: 25  VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGI--TKFDHSDFD-----------VHNAA 71
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            ++D   FD  F      +    D      L      +  A  +  +L+    GV V   
Sbjct: 72  EIQDFP-FDKYFVK---KDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 127
Query: 237 VSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
           +    K I D         PK      L     ++    V+      G C +I+TACSSS
Sbjct: 128 IGGI-KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 186
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTP----DIHIKMSKSGMLSPDGHCYSFDQRAN 343
             AI  A  S+  G   + L GG     TP          + S    P      FD+  N
Sbjct: 187 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRN 246
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
           GFV GEG G+               I   + G+G   D        P  +  I+      
Sbjct: 247 GFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLAL 306
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
           ++  I+P  +  + AHGT T   +  E  A+     K         + S KS  GH   A
Sbjct: 307 EEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGA 360
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           AG +  I  I +++H  +P T   + +++         +I           K+   A  N
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSD---------YIEANVVYGQGLEKEIPYAISN 411
Query: 524 SFGFSGTNA 532
           +FGF G NA
Sbjct: 412 TFGFGGHNA 420

>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 154/429 (35%), Gaps = 46/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G     P  N   +FWN+L  G+  +  I  T++   DF                 
Sbjct: 25  VVVTGYGVTSPIGNTPAEFWNSLATGKIGIGGI--TKFDHSDFD-----------VHNAA 71
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            ++D   FD  F      +    D      L      +  A  +  +L+    GV V   
Sbjct: 72  EIQDFP-FDKYFVK---KDTNRFDNYSLYALYAAQEAVNHANLDVAALNRDRFGVIVASG 127
Query: 237 VSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
           +    K I D         PK      L     ++    V+      G C +I+TACSSS
Sbjct: 128 IGGI-KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 186
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTP----DIHIKMSKSGMLSPDGHCYSFDQRAN 343
             AI  A  S+  G   + L GG     TP          + S    P      FD+  N
Sbjct: 187 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRN 246
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
           GFV GEG G+               I   + G+G   D        P  +  I+      
Sbjct: 247 GFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLAL 306
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
           ++  I+P  +  + AHGT T   +  E  A+     K         + S KS  GH   A
Sbjct: 307 EEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------AVPVSSTKSFTGHLLGA 360
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           AG +  I  I +++H  +P T   + ++++I+       +  +  + +I       A  N
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN----VVYGQGLAKEIP-----YAISN 411
Query: 524 SFGFSGTNA 532
           +FGF G NA
Sbjct: 412 TFGFGGHNA 420

>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 151/395 (38%), Gaps = 50/395 (12%)
Query: 106 DDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKN 165
           DD DKS+      I G+    P    +  +W+ +L GR+ +   P TR+ +  +      
Sbjct: 5   DDDDKSV-----LITGVGVVAPNGLGLAPYWSAVLDGRHGLG--PVTRFDVSRY------ 51
Query: 166 AIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLS 225
                     G ++D    D +   + P      DP  RL L      ++DA  +P SL+
Sbjct: 52  -----PATLAGQIDDFHAPDHIPGRLLPQ----TDPSTRLALTAADWALQDAKADPESLT 102
Query: 226 GSLCGVFVGCAVS-------DYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPC 277
               GV    A         ++ KL ++ PK  + Y       ++   ++S    ++GP 
Sbjct: 103 DYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPS 162
Query: 278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDG 333
            A+    +  L A+ HA  ++  G + + ++GGV     P   +    SG +S    PD 
Sbjct: 163 SALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDR 221
Query: 334 HCYSFDQRANGFVPGEGVGV-XXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNT 392
               FD+RA G+VPGEG  +                 Y  + G     D       AP +
Sbjct: 222 AYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFD------PAPGS 275
Query: 393 KSQIRLQTKIYKKFN---INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCA 449
                L+  I    N     P D+ ++ A G G    D  E  A+   F +         
Sbjct: 276 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVP- 334
Query: 450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPT 484
               K+  G   +  G + ++  ++SL+  V+ PT
Sbjct: 335 ----KTTTGRLYSGGGPLDVVTALMSLREGVIAPT 365

>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 150/429 (34%), Gaps = 46/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G     P  N  ++FWN+L  G+  +  I  T++   DF                 
Sbjct: 26  VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGI--TKFDHSDFD-----------VHNAA 72
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            ++D   FD  F      +    D      L      +  A  +  +L+    GV V   
Sbjct: 73  EIQDFP-FDKYFVK---KDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 128
Query: 237 VSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
           +    K I D         PK      L     ++    V+      G C +I+TACSSS
Sbjct: 129 IGGI-KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 187
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTP----DIHIKMSKSGMLSPDGHCYSFDQRAN 343
             AI  A  S+  G   + L GG     TP          + S    P      FD+  N
Sbjct: 188 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRN 247
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
           GFV GEG G+               I   + G+G   D        P  +  I+      
Sbjct: 248 GFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLAL 307
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
           ++  I+P  +  + A GT T   +  E  A+     K         + S KS  GH   A
Sbjct: 308 EEAEISPEQVAYVNAAGTSTPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGA 361
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           AG +  I  I +++H  +P T   + +++         +I           K+   A  N
Sbjct: 362 AGAVEAIVTIEAMRHNFVPMTAGTSEVSD---------YIEANVVYAQGLEKEIPYAISN 412
Query: 524 SFGFSGTNA 532
           +FGF G NA
Sbjct: 413 TFGFGGHNA 421

>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 28/281 (9%)
Query: 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK 325
           ++S     +GP     TAC++S+ AI  A   +  G + + LAGG           K+S 
Sbjct: 175 QISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-----KVSL 229
Query: 326 SGMLS-----------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIK 374
            G  +           P      FD+  +GFV GEG  +                   I 
Sbjct: 230 GGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEII 289
Query: 375 GWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
           G+G   D         +    +R      +  ++ P  +  + AH T T +GD  E EAL
Sbjct: 290 GYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEAL 349
Query: 435 CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI 494
              F   +      A+ S KS  GH   AAG I     IL+L+  VLP T+N     EH 
Sbjct: 350 KTVFGVGAG----PAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNL----EH- 400
Query: 495 KLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIV 535
                P            ++    +A  N FGF G NA ++
Sbjct: 401 ---PDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVL 438

>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 596 AFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTD-EKSYCMP--LYCKIP 652
           A+  ++     +VI++TG    F C G +           R  D   S   P     + P
Sbjct: 42  AYQRLDDDPAVRVIVLTGAPPAF-CSGAQISAAAETFAAPRNPDFSASPVQPAAFELRTP 100
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR 712
           VIAA+ GHAIG G  + L  D  I +EE  Y  P +R+G  P A +    P+  G  ++ 
Sbjct: 101 VIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAA 160
Query: 713 EILFTASEFKGKELKERGISMPVLPRKQVL 742
           E+L T + F  +   E G++   LP  +VL
Sbjct: 161 ELLLTGASFSAQRAVETGLANRCLPAGKVL 190

>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK 325
           ++S     +GP     TA ++S+ AI  A   +  G + + LAGG           K+S 
Sbjct: 175 QISIKHRFRGPLGCPVTAXAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-----KVSL 229
Query: 326 SGMLS-----------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIK 374
            G  +           P      FD+  +GFV GEG  +                   I 
Sbjct: 230 GGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEII 289
Query: 375 GWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
           G+G   D         +    +R      +  ++ P  +  + AH T T +GD  E EAL
Sbjct: 290 GYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEAL 349
Query: 435 CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI 494
              F   +      A+ S KS  GH   AAG I     IL+L+  VLP T+N     EH 
Sbjct: 350 KTVFGVGAG----PAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNL----EH- 400
Query: 495 KLENSPFFINTKCKSWDIKNKKKR-----MAAINSFGFSGTNAHIV 535
                    +      D+     R     +A  N FGF G NA ++
Sbjct: 401 --------PDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVL 438

>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 83/210 (39%), Gaps = 3/210 (1%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE--KSY 643
           NS V+  +T A + ++       IIITG    FA G   + +  +    + FT +   ++
Sbjct: 50  NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADA-FTADFFATW 108
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
                 + P IAA+ G+A+G G  + + CD  I ++ + +  P ++ G  PG G +    
Sbjct: 109 GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLT 168
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYXXXXXXXXXXXXXXXXXXX 763
           +  GK  + +++ T       E +  G+   V+P   +L                     
Sbjct: 169 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMA 228
Query: 764 XXYYSHSLQKKLSTIFLHELTMHDYTFVNN 793
               + + +  LS   L+E  +    F   
Sbjct: 229 KEAVNRAFESSLSEGLLYERRLFHSAFATE 258

>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE--KSY 643
           NS V+  +T A + ++       IIITG    FA G   + +  +      FT +   ++
Sbjct: 30  NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFA-DAFTADFFATW 88
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
                 + P IAA+ G+A+G G  + + CD  I ++ + +  P ++ G  PG G +    
Sbjct: 89  GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLT 148
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
           +  GK  + +++ T       E +  G+   V+P   +L
Sbjct: 149 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLL 187

>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE--KSY 643
           NS V+  +T A + ++       IIITG    FA G   + +  +      FT +   ++
Sbjct: 29  NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFA-DAFTADFFATW 87
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
                 + P IAA+ G+A+G G  + + CD  I ++ + +  P ++ G  PG G +    
Sbjct: 88  GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLT 147
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
           +  GK  + +++ T       E +  G+   V+P   +L
Sbjct: 148 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLL 186

>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           N T+   + DA    ++ ++   I++TG E  FA G     ++ +    +R  +  S   
Sbjct: 35  NQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWD 94
Query: 646 PL-YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
            L   + P++AA+ G+A+G G  + + CD  I ++ + +  P +  G  PG G T    +
Sbjct: 95  SLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTR 154
Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
             GK  + ++  T      +E +  G+   ++P   +L
Sbjct: 155 AVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLL 192

>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 597 FSYINSSVQYKVIIITGY-ENYFACG-------GTKEGLLKIQKGISRFTDEKSYCMPLY 648
            + IN     +V+I+TG  E  F  G       G  E  ++      R T E    +P  
Sbjct: 45  LTQINEEANTRVVILTGAGEKAFCAGADLKERAGXNEEQVRHAVSXIRTTXEXVEQLPQ- 103
Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
              PVIAA+ G A+G G  + L CD+ I +E +            PGAG T   P+  G 
Sbjct: 104 ---PVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGV 160
Query: 709 ILSREILFTASEFKGKELKERGISMPVLP 737
             ++E+++T      +E KE G+   V+P
Sbjct: 161 GRAKELIYTGRRISAQEAKEYGLVEFVVP 189

>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           +++  N+ ++  + +      +     V +ITG   +FA G     + + +   +   D 
Sbjct: 25  ARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAE-KDLAATLNDT 83
Query: 641 KSYCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
           +     L+ ++     P+IAA+ G+A+GAG  + L CD  +  E + +  P +  G  PG
Sbjct: 84  RP---QLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPG 140
Query: 696 AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFY 744
           AG T    +  GK L+ +++ +      ++ ++ G+   V P    L Y
Sbjct: 141 AGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEY 189

>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ----KGISRFTDEKSYC 644
           +V  I  A    + + + +VI++TG    FA G   + + K      + +++F D     
Sbjct: 33  MVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLS 92
Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
           +    K P+IAA+ G A+G G+ + L CD  + S  + +  P +  G  PGAG T    +
Sbjct: 93  I---VKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTK 149
Query: 705 RFGKILSREILFTASEFKGKELKERGI 731
             G   + E L+T +    KE ++ GI
Sbjct: 150 LIGPKRALEWLWTGARMSAKEAEQLGI 176

>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTD------EKSYCMPLYCKIPVIAAMQGHA 661
            I++TG +  FA G      +K  + +S F D       K +      K PVIAA+ G+A
Sbjct: 80  AIVLTGGDKAFAAGAD----IKEMQNLS-FQDCYSSKFLKHWDHLTQVKKPVIAAVNGYA 134
Query: 662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEF 721
            G G  + + CD     E++ +  P +  G  PGAG T    +  GK L+ E++ T    
Sbjct: 135 FGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 194
Query: 722 KGKELKERGISMPVLP 737
             ++ K+ G+   + P
Sbjct: 195 SAQDAKQAGLVSKICP 210

>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 609 IIITGYENYFACGGTKEGLLK--IQKGIS-RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665
           I++TG E  FA G   + +     Q   S +F     +   +  K PVIAA+ G+A+G G
Sbjct: 56  IVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI--KKPVIAAVNGYALGGG 113
Query: 666 WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725
             + + CD     E++ +  P +  G  PGAG T    +  GK L+ E++ T      ++
Sbjct: 114 CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 173
Query: 726 LKERGISMPVLP 737
            K+ G+   + P
Sbjct: 174 AKQAGLVSKIFP 185

>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 609 IIITGYENYFACGGTKEGLLK--IQKGIS-RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665
           I++TG E  FA G   + +     Q   S +F     +   +  K PVIAA+ G+A+G G
Sbjct: 55  IVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI--KKPVIAAVNGYALGGG 112
Query: 666 WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725
             + + CD     E++ +  P +  G  PGAG T    +  GK L+ E++ T      ++
Sbjct: 113 CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 172
Query: 726 LKERGISMPVLP 737
            K+ G+   + P
Sbjct: 173 AKQAGLVSKIFP 184

>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 609 IIITGYENYFACGGTKEGLLK--IQKGIS-RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665
           I++TG E  FA G   + +     Q   S +F     +   +  K PVIAA+ G+A+G G
Sbjct: 53  IVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI--KKPVIAAVNGYALGGG 110
Query: 666 WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725
             + + CD     E++ +  P +  G  PGAG T    +  GK L+ E++ T      ++
Sbjct: 111 CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 170
Query: 726 LKERGISMPVLP 737
            K+ G+   + P
Sbjct: 171 AKQAGLVSKIFP 182

>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667
           V+IITG +  F C G     LK   G S   D  S   P   K PVI A+ G A+  G  
Sbjct: 55  VVIITGADPVF-CAGLD---LKELGGSSALPD-ISPRWPALTK-PVIGAINGAAVTGGLE 108
Query: 668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727
           + L+CD  I SE + +   + R G  P  G ++  PQ+ G  L+R +  T       +  
Sbjct: 109 LALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADAL 168
Query: 728 ERGISMPVLPRKQVL 742
             G+   V+P  Q+L
Sbjct: 169 RAGLVTEVVPHDQLL 183

>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667
           V+IITG +  F C G     LK   G S   D  S   P   K PVI A+ G A+  G  
Sbjct: 72  VVIITGADPVF-CAGLD---LKELGGSSALPD-ISPRWPALTK-PVIGAINGAAVTGGLE 125
Query: 668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727
           + L+CD  I SE + +   + R G  P  G ++  PQ+ G  L+R +  T       +  
Sbjct: 126 LALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADAL 185
Query: 728 ERGISMPVLPRKQVL 742
             G+   V+P  Q+L
Sbjct: 186 RAGLVTEVVPHDQLL 200

>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein Length = 261

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEK---S 642
           N  V++ +  A S   ++   K+++++   + F CG      L     I R TD++   S
Sbjct: 31  NPEVMREVQSALS-TAAADDSKLVLLSAVGSVFCCG------LDFIYFIRRLTDDRKRES 83
Query: 643 YCMP----------LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
             M           +  K P+I A+ G AIG G ++   CD    +E++ +Q+PY  +G 
Sbjct: 84  TKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQ 143
Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
           +P   ST++FP+  G   + E+L +  +   +E   +G+
Sbjct: 144 SPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGL 182

>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy Length = 260

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKI 709
           K P++ ++ G AIG G ++   CD    +E++ +Q+PY  +G +P   S++ FP+  GK 
Sbjct: 100 KKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKA 159
Query: 710 LSREILFTASEFKGKELKERGISMPVL 736
            + E+L    +   +E   +G+   V 
Sbjct: 160 SANEMLIAGRKLTAREACAKGLVSQVF 186

>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1 Length = 291

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKI 709
           K P++ ++ G AIG G ++   CD    +E++ +Q+PY  +G +P   S++ FP+  GK 
Sbjct: 119 KKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKA 178
Query: 710 LSREILFTASEFKGKELKERGI 731
            + E+L    +   +E   +G+
Sbjct: 179 SANEMLIAGRKLTAREACAKGL 200

>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           +++  N  V +G+  A   ++SS    V IITG    F  G   +  +  +  +S     
Sbjct: 27  ARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGLG 86
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
            +   P   + P+IAA++G A+  G  + L CD  +    + +  P ++ G   GAG  L
Sbjct: 87  FTNVPP---RKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLL 143
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERG 730
             P R    ++ E+  T   F  ++  + G
Sbjct: 144 RLPNRIPYQVAMELALTGESFTAEDAAKYG 173

>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVI A+ G A+  G  + L+CD  I SE + +   + R G  P  G ++  PQ+ G  L+
Sbjct: 94  PVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLA 153
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVL 742
           R +  T      ++    G+   V+    +L
Sbjct: 154 RRMSLTGDYLSAQDALRAGLVTEVVAHDDLL 184

>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVIA + G A+G G ++ L CD  + +  S +Q  + R G  P  G++ + P   G+  +
Sbjct: 94  PVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRART 153
Query: 712 REILFTASEFKGKELKERGI 731
             +  TA +       E G+
Sbjct: 154 SRMAMTAEKISAATAFEWGM 173

>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 634 ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT 693
           ISR+  +K++ +   C  PVIAA+ G  IG G  +   CD    ++++ +Q   +  G  
Sbjct: 93  ISRY--QKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLA 150
Query: 694 PGAGSTLIFPQRFG-KILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
              G+    P+  G + L  E+ FTA +    E  + G+   V P K V+ 
Sbjct: 151 ADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVML 201

>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 12/173 (6%)
Query: 578 NYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG---- 633
           N+   +  +S V   +T+    +      +V++I G   +F+ G   +    + +     
Sbjct: 22  NHAPANAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQAT 81
Query: 634 ----ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR 689
               + + T E+       C  PVIAA+ G A+G G      C     +E +    P + 
Sbjct: 82  ELAQLGQVTFERVE----KCSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGLPELT 137
Query: 690 YGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
            G  PG   T   P+  GK  + E   T++   G E  + G+   V   +  L
Sbjct: 138 LGLIPGFAGTQRLPRYVGKAKACEXXLTSTPITGAEALKWGLVNGVFAEETFL 190

>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
           C+IPV+AA+ G A+G G ++    D    +E +    P+++ G     G  L +P     
Sbjct: 121 CRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISL 180
Query: 709 ILSREILFTASEFKGKELKERGIS 732
           +L++E   T +    +   E G++
Sbjct: 181 LLAKEYALTGTRISAQRAVELGLA 204

>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG----GTKEGLLK-------- 629
           ++  N    + + + F+ I+     + ++I+G    F  G         +L+        
Sbjct: 52  RNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVAR 111
Query: 630 ----IQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS 685
               ++  I+R+  ++++ +   C  PVIAA+ G  IG G  +   CD    ++++ +Q 
Sbjct: 112 ISWYLRDIITRY--QETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQV 169
Query: 686 PYMRYGFTPGAGSTLIFPQRFG-KILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
             +  G     G+    P+  G + L  E+ FTA +    E    G+   V P K+V+ 
Sbjct: 170 KEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVML 228

>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 289

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE------GLLKIQKGISRFTDEKS 642
            VK +  A +         VII+TG  +   C G  +      G  K   G+        
Sbjct: 56  TVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDF 115
Query: 643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF 702
                 C  PV+A + G++IG G  + + CD TI ++ +++     + G   G       
Sbjct: 116 QRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYM 175
Query: 703 PQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
            +  G+  +REI F   ++  K+  + G+   V+P
Sbjct: 176 ARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVP 210

>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE-----GLLKIQKGISRFTDEKSYC 644
           V  + DAFS         VI++TG  +   C G  +     G    +  I R        
Sbjct: 42  VAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQR 101
Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFP 703
           +      PVIA ++G+A+G G  + + CD TI ++ +++     + G F  G GS  +  
Sbjct: 102 LIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYL-A 160
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
           +  G   +REI +   ++  +E  + G+   V+P ++V
Sbjct: 161 RIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKV 198

>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme A Synthases (Menb) In Complex With Bicarbonate Length = 285

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE------GLLKIQKGISRFTDEKS 642
            VK +  A +         VII+TG  +   C G  +      G  K   G+        
Sbjct: 52  TVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDF 111
Query: 643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF 702
                 C  PV+A + G++IG G  + + CD TI ++ +++     + G   G       
Sbjct: 112 QRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYM 171
Query: 703 PQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
            +  G+  +REI F   ++  K+  + G+   V+P
Sbjct: 172 ARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVP 206

>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 262

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVIAA+ GHA+  G  + L+CD  +  E++V      R+G     G T+  P+  G   +
Sbjct: 103 PVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRA 162
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQ 740
            +++ T       E  + G+   V+ R Q
Sbjct: 163 MDLILTGRPVHANEALDIGLVNRVVARGQ 191

>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE-----GLLKIQKGISRFTDEKSYC 644
           V  + DAF+         VII+TG      C G  +     G    +  I R        
Sbjct: 41  VNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQR 100
Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
           +      PVIA + G+AIG G  + + CD TI ++ +++     + G   G        +
Sbjct: 101 LIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLAR 160
Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
             G   +REI +   ++  +E  E G+   V+P +Q+
Sbjct: 161 IVGHKKAREIWYLCRQYTAQEALEMGLVNKVVPLEQL 197

>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 49/91 (53%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           P++ A+ G A GAG ++ L+ D  + +  + + + ++R G  P +G + + P+  G   +
Sbjct: 93  PLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKA 152
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVL 742
           +E+L  +     +E    G+   V+P ++++
Sbjct: 153 QELLLLSPRLSAEEALALGLVHRVVPAEKLM 183

>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           PVIAA+ G+A+  G  + L+CD  +  +++V+     R+G     G T+  P+  G   +
Sbjct: 100 PVIAAVSGYAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRA 159
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQ 740
            +++ T    +  E    G++  V+P  Q
Sbjct: 160 MDMILTGRAVQADEALAIGLANRVVPNGQ 188

>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The Cyanobacterium Anabaena Sp. Pcc 7120 Length = 263

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQRFGK 708
           ++PVI+A+ G A+     + L  D  + SE +V+Q  P++  G  PG G  +++P   G 
Sbjct: 117 EVPVISAVNGAALLHSEYI-LTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGL 175
Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
              R  LFT  +   ++  E  +   VLP+ +++
Sbjct: 176 YRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLM 209

>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The Cyanobacterium Anabaena Sp. Pcc 7120 Length = 263

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQRFGK 708
           ++PVI+A+ G A+     + L  D  + SE +V+Q  P++  G  PG G  +++P   G 
Sbjct: 117 EVPVISAVNGAALLHSEYI-LTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGL 175
Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
              R  LFT  +   ++  E  +   VLP+ +++
Sbjct: 176 YRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLM 209

>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 82/393 (20%), Positives = 153/393 (38%), Gaps = 51/393 (12%)
Query: 184  FDPLFFNISPSEAEYMDPQQRLFLQNCWTCIE---DAGYNPFSL----SGSLCGVFVGCA 236
            FDP  + ISP  A  +D   R+ L N    ++    +G+ P  L      S      G  
Sbjct: 2629 FDPTVWGISPDMASSID---RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTG 2685
Query: 237  VSDYNKLITDPKMYNAYALMGES------VSILPARVS-----YFLNLQGPCLAIDTACS 285
            +     + T   MY+   L+G +        +LP  V+      ++   G  +    AC+
Sbjct: 2686 MGGMTSMQT---MYHG-NLLGRAKPNDILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACA 2741
Query: 286  SSLVAIAHACDSLILGNSKIALAGGV------YIINTPDI----HIKMSKSGMLSPDGHC 335
            ++ V++    D + LG + + +AGG        II   D+      +M ++  +S     
Sbjct: 2742 TAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFS 2801
Query: 336  YSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKS- 394
             + D+R  GF+  +G G                +  ++       DG    I AP   + 
Sbjct: 2802 RANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGAL 2861
Query: 395  ------QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE---FEALCESFNKFSYHK 445
                  +     +   +  +  +DI ++  H T T   DP E    E + +S  +   + 
Sbjct: 2862 GAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNP 2921
Query: 446  NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT 505
             F    S K+  GH+   A V  M+ +   L+  V+PP  + + +++  +L  S  F+  
Sbjct: 2922 LFIV--SQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDD--ELATSGHFVWV 2977
Query: 506  KCKSWDIKNKKKRMAA-INSFGFSGTNAHIVLM 537
            + +  D++ K    A  + S GF   +  + L+
Sbjct: 2978 R-EPLDLRGKFPLKAGLVTSLGFGHVSGLVALV 3009

>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Acinetobacter Baumannii Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
           P+I A++G AIG G  + L  D       +++Q P++  G +P  G++ +  ++ G   +
Sbjct: 101 PLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKA 160
Query: 712 REILFTASEFKGKELKERGI 731
            E+LFTA +F  +   + G+
Sbjct: 161 AELLFTAKKFNAETALQAGL 180

>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Avium Length = 278

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 591 KGITDAFSYINSSVQYKVIIITGYENYFACGGT----KEGLLKIQKGISRFTDEKSYCMP 646
           + + D +  I+     + +++ G    F+ GG+     E +   Q  I    + +     
Sbjct: 49  RDLADIWPVIDRDPAVRAVLVRGEGKAFSSGGSFDLIDETIGDYQGRIRIMREARDLVHN 108
Query: 647 LY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQR 705
           +  C  PV++A++G A+GAG  + L  D ++    +     + + G   G  + + +P  
Sbjct: 109 MINCDTPVVSAIRGPAVGAGLVVALLADISVAGRTAKLIDGHTKLGVAAGDHAAICWPLL 168
Query: 706 FGKILSREILFTASEFKGKELKERGI 731
            G   ++  L T     G+E +  G+
Sbjct: 169 VGMAKAKYYLLTCETLLGEEAERIGL 194

>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of Rpfc Length = 305

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 642 SYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTL 700
           ++ + L  +   IA +QG+A+G G+   L C +TI +EE V    P + +   PG G+  
Sbjct: 132 AFHVGLGARAHSIALVQGNALGGGFEAALSC-HTIIAEEGVMMGLPEVLFDLFPGMGAYS 190
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740
              QR    L+++I+   + +  ++L   G+   V+PR Q
Sbjct: 191 FMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQ 230

>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium. Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 608 VIIITGYENYFACGGTKE------GLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA 661
           VII+TG  +   C G  +      G  +   G+              C  PV+A + G++
Sbjct: 74  VIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYS 133
Query: 662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEF 721
           IG G  +   CD TI +E +++     + G   G        +  G+  +REI F   ++
Sbjct: 134 IGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAREIWFLCRQY 193
Query: 722 KGKELKERGISMPVLP 737
             ++  + G+   V+P
Sbjct: 194 DAQQALDXGLVNTVVP 209

>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA-GSTLIFPQRFGKIL 710
           PVIAA+ G AIG G  + L CD  + S+++ +++  +  G T    G + + P+  G   
Sbjct: 125 PVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSR 184
Query: 711 SREILFTASEFKGKELKERGI 731
           + +I+ T  +    E +  G+
Sbjct: 185 ASDIMLTGRDVDADEAERIGL 205

>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           +++  N  V   + DA        +   ++ITG  +   C G    L  I +G + +  E
Sbjct: 35  ARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGAD--LKAISRGENLYHAE 92
Query: 641 K------SYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP 694
                   Y      K P IAA+ G A+G G  + L  D  I  E + +  P ++ G   
Sbjct: 93  HPEWGFAGYVHHFIDK-PTIAAVNGTALGGGSELALASDLVIACESASFGLPEVKRGLIA 151
Query: 695 GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
           GAG      ++  + ++ E++ T       +    G+   V+P   V+
Sbjct: 152 GAGGVFRIVEQLPRKVALELVLTGEPMTASDALRWGLINEVVPDGTVV 199

>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase Domain-Containing Protein 3 (Echdc3) Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 560 PLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFA 619
           P SA+ L    I   ++ N   ++  +  ++K +     +   S   KVIII+     F+
Sbjct: 34  PTSARQLDG--IRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFS 91
Query: 620 CGGTKEGLLKIQKGISRFTDEKSYCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDY 674
            G   + L + ++G     +    C  +   I     PVIA + G A  AG  +   CD 
Sbjct: 92  SGHDLKELTE-EQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDI 150
Query: 675 TIFSEESVYQSPYMRYGF---TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
            + S++S + +P +  G    TPG       P++    ++ E+LFT      +E    G+
Sbjct: 151 AVASDKSSFATPGVNVGLFCSTPGVALARAVPRK----VALEMLFTGEPISAQEALLHGL 206
Query: 732 SMPVLPRKQV 741
              V+P  ++
Sbjct: 207 LSKVVPEAEL 216

>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 15/137 (10%)
Query: 605 QYKVIIITGYENYFACG---------GTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIA 655
           Q + ++I G  ++F+ G            EGL+  Q      T  + +    YC++PVIA
Sbjct: 58  QIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQ------TWHRVFDKIQYCRVPVIA 111
Query: 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL 715
           A++G  IG G  +       +    + Y  P    G   G G ++  P+  G     +++
Sbjct: 112 ALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMM 171
Query: 716 FTASEFKGKELKERGIS 732
            T   +   E    G S
Sbjct: 172 LTGRVYSAAEGVVHGFS 188

>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In Complex With Bicarbonate Length = 275

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFPQRFGKILS 711
           VIA + G+AIG G  + L CD TI ++ +++     + G F  G GS+ +  +  G+  +
Sbjct: 112 VIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYL-ARIVGQKKA 170
Query: 712 REILFTASEFKGKELKERGISMPVLP 737
           REI +   ++  +E +  G+   V+P
Sbjct: 171 REIWYLCRQYSAQEAERMGMVNTVVP 196

>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 715

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG 707
           +P +AA+ G A+G G  M L  D+ + ++ +    P ++ G  PG G T+  P+  G
Sbjct: 104 VPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIG 160

>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSP--YMRYGFTPGAGSTLIFPQRFGKI 709
           P IAA+QG  I  G  +   CD  I +E++++  P   M  G     G T       G  
Sbjct: 119 PSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGVEYHGHTW----ELGPR 174
Query: 710 LSREILFTASEFKGKELKERGISMPVLPRKQV 741
            ++EILFT      +E+ + G+   V+PR ++
Sbjct: 175 KAKEILFTGRAMTAEEVAQTGMVNRVVPRDRL 206

>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           +++  N+ V  G+ DA        + + +++TG  +   C G     +  ++ +    D 
Sbjct: 29  ARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYH-PDH 87
Query: 641 KSYCMPLYCK----IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
             +    Y +     P IAA+ G A+G G  + L  D  +  E + +  P ++ G    A
Sbjct: 88  PEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAA 147
Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
           G      ++  + ++  +L T         ++ G+
Sbjct: 148 GGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182

>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From Mycobacterium Marinum In Complex With An Unknown Ligand Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 591 KGITDAFSYINSSVQYKVIIITGYENYFACGGT----KEGLLKIQKGISRFTDEKSYCMP 646
           + + D +  I+     +V+++ G    F+ GG+     E +   +  I    + +   + 
Sbjct: 43  RDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLN 102
Query: 647 LY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQR 705
           L     PV++A++G A+GAG  + L  D ++ S  +     + + G   G  + + +P  
Sbjct: 103 LVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLL 162
Query: 706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
            G   ++  L T     G+E +  G+    +   +VL
Sbjct: 163 VGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVL 199

>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
           +++  N+ V  G+ DA        + + +++TG  +   C G     +  ++ +    D 
Sbjct: 29  ARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYH-PDH 87
Query: 641 KSYCMPLYCK----IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
             +    Y +     P IAA+ G A+G G  + L  D  +  E + +  P ++ G    A
Sbjct: 88  PEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAA 147
Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
           G      ++  + ++  +L T         ++ G+
Sbjct: 148 GGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182

>pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase His122ala Mutant Bound To Its Natural Product (2s,4s)- Alpha-Campholinic Acid Length = 257

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQR 705
           L  ++PVIAA+ G    A   + +  D  + +E + +Q  P+   G  PG G+ +++P  
Sbjct: 105 LSIEVPVIAAVNGPVTNAP-EIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHV 163
Query: 706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
            G    R  L T  E   +   + G    VL  +++L
Sbjct: 164 LGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELL 200

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	829
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	1e-173
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-172
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	1e-167
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	1e-161
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	1e-48
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	1e-47
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	3e-47
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	3e-47
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	4e-47
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	9e-46
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	9e-46
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	1e-44
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	1e-44
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	6e-44
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	1e-43
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	2e-43
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	2e-43
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	9e-43
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	1e-42
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	2e-42
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	4e-42
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	1e-37
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	2e-27
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	4e-24
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	5e-21
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	7e-22
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	1e-21
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	1e-21
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	2e-21
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	1e-20
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	2e-20
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	3e-20
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	4e-20
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	7e-20
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	8e-20
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	8e-20
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	2e-19
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	5e-19
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	6e-19
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	1e-18
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	2e-18
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	4e-18
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	5e-18
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	7e-18
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	7e-18
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	3e-17
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	3e-17
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	7e-17
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	8e-17
3t3w_A	279	Probable enoyl-COA hydratase; ssgcid, structural g	3e-16
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	4e-16
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	5e-16
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 11251J, struct	6e-16
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	9e-16
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	1e-15
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	2e-15
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	4e-15
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	5e-15
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	7e-15
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	7e-15
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	8e-15
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	9e-15
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	1e-14
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	1e-14
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	2e-14
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	3e-14
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	3e-14
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	3e-14
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	3e-14
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	4e-14
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	5e-14
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	6e-14
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	9e-14
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	9e-14
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	1e-13
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	2e-13
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	2e-13
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	3e-13
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	4e-13
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	7e-13
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	9e-13
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	2e-12
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	3e-12
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	5e-12
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	1e-11
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	2e-11
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	2e-11
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	3e-11
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	3e-11
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	4e-11
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	6e-11
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	6e-11
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	2e-10
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	3e-06
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	1e-05
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	2e-05

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965

 Score =  525 bits (1354), Expect = e-173
 Identities = 139/428 (32%), Positives = 233/428 (54%), Gaps = 25/428 (5%)

Query: 114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
            +++ I G+SG+ P++ N+++FW+NL+ G + V+     RW    +    +         
Sbjct: 3   GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTD-DDRRWKAGLYGLPRR--------- 52

Query: 174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFV 233
             G L+D+  FD  FF + P +A  MDPQ RL L+  +  I D G NP SL G+  GV+V
Sbjct: 53  -SGKLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWV 111

Query: 234 GCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
           G + S+ ++ ++ DP+    Y+++G   +++  R+S+F + +GP +A+DTACSSSL+A+ 
Sbjct: 112 GVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQ 171

Query: 293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352
           +A  ++  G    A+ GG+ ++  P+  ++  + GMLSP+G C +FD   NG+   EGV 
Sbjct: 172 NAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVV 231

Query: 353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPN 411
            ++L K   A++    +Y  I   G N DG K  G+T P+   Q +L   +Y+   + P 
Sbjct: 232 AVLLTKKSLARR----VYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPE 287

Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
             + +EAHGTGTK+GDP E   +  +       +    +GS KSN+GH   A+G+  + K
Sbjct: 288 SFEYIEAHGTGTKVGDPQELNGITRALCA--TRQEPLLIGSTKSNMGHPEPASGLAALAK 345

Query: 472 IILSLKHKVLPPTINYNILNEHIKLENS-PFFINTKCKSWDIKNKKKRMAAINSFGFSGT 530
           ++LSL+H +  P ++++  N  I         +  +         +     INSFGF G+
Sbjct: 346 VLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPV-----RGGNVGINSFGFGGS 400

Query: 531 NAHIVLME 538
           N HI+L  
Sbjct: 401 NVHIILRP 408

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  550 bits (1418), Expect = e-172
 Identities = 143/427 (33%), Positives = 231/427 (54%), Gaps = 25/427 (5%)

Query: 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
           +++ I G+SG+ P++ N+++FW NL+ G + V+     RW    +    +          
Sbjct: 2   EEVVIAGMSGKLPESENLEEFWANLIGGVDMVT-ADDRRWKAGLYGLPRR---------- 50

Query: 175 MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
           MG L+D+  FD  FF +   +A  MDPQ R+ L+  +  I D G NP SL G+  GV+VG
Sbjct: 51  MGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVG 110

Query: 235 CAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
            + SD ++ ++ DP+    Y+++G   +++  R+S+F + +GP + IDTACSSSL+A+  
Sbjct: 111 VSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQS 170

Query: 294 ACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353
           A  ++  G    A+ GG+ ++  P+  ++  K GMLS DG C SFD    G+   E V  
Sbjct: 171 AYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVA 230

Query: 354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPND 412
           ++L K   A++    +Y  I   G N DG K  G+T P+   Q +L   +Y     +P  
Sbjct: 231 VLLTKKSLARR----VYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPES 286

Query: 413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472
           ++ +EAHGTGTK+GDP E   +  +       +    +GS KSN+GH   A+GV  +IK+
Sbjct: 287 LEYIEAHGTGTKVGDPQELNGIVNALCA--TRREPLLIGSTKSNMGHPEPASGVAALIKV 344

Query: 473 ILSLKHKVLPPTINYNILNEHIK-LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
           +LSL+H V  P ++Y+  N  I  L++    +  +         +     INSFGF G+N
Sbjct: 345 LLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPI-----RGGNVGINSFGFGGSN 399

Query: 532 AHIVLME 538
            H++L  
Sbjct: 400 VHVILQP 406

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915

 Score =  507 bits (1309), Expect = e-167
 Identities = 155/427 (36%), Positives = 254/427 (59%), Gaps = 3/427 (0%)

Query: 114 NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTI 171
           +D IAI+ ++ + P   N  ++ W  L  G   +S  P+ R W +   +  D +  G + 
Sbjct: 5   SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSY 64

Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGV 231
             K G L+D   FD  FF +SP EA  MDPQQRL L+  W  +E+AG +P SL G+  GV
Sbjct: 65  VDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGV 124

Query: 232 FVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
           F+G A   Y +     +    Y++ G + ++   R+SY + L+GP +++DTACSSSLVA+
Sbjct: 125 FLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLVAL 184

Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
             A +SL  G S +A+ GG  ++ TP + +  S+   L+ DG   +F   A+GF   EGV
Sbjct: 185 HLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGV 244

Query: 352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
            +++L++L +A+++G ++  +++G  +NQDG +NG++AP+  +Q R+  +  +   + P 
Sbjct: 245 TLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPG 304

Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
           D+  +EAHGTGT LGDPIE  AL +++ +         LGSVKSNIGH+  AAGV G++K
Sbjct: 305 DVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLK 364

Query: 472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
           ++L+L++  LP T++      H+   +    +    + W  + ++ R AA+++FG SGTN
Sbjct: 365 VVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWR-RGERTRRAAVSAFGISGTN 423

Query: 532 AHIVLME 538
           AH+++ E
Sbjct: 424 AHVIVEE 430

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917

 Score =  491 bits (1265), Expect = e-161
 Identities = 157/427 (36%), Positives = 248/427 (58%), Gaps = 14/427 (3%)

Query: 114 NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
            + IAI+G++ +FP   ++ + FW  +  G + +++ P+ R      ++ D +A      
Sbjct: 38  GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRG-----WEPDPDA------ 86

Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
           +  G L     FD  FF ISP EA  MDPQQR+ L+  W  +E AG++P SL GS  GVF
Sbjct: 87  RLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVF 146

Query: 233 VGCAVSDY-NKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
            G    DY  +    P     Y   G + S+   RV+Y L L+GP + +DTACSS L A+
Sbjct: 147 TGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTAL 206

Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
             A +SL      +ALAGGV ++++P    +    G L+ DG C  F + A+GF   EG 
Sbjct: 207 HLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGA 266

Query: 352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
           GVL+L++L  A+++G  +  +++G  VNQDG +NG+TAP+  +Q R+  +  +   +   
Sbjct: 267 GVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAG 326

Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
           D+  +EAHGTGT+LGDPIE  AL  ++       +   +GSVKSNIGH+  AAGV G++K
Sbjct: 327 DVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMK 386

Query: 472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
            +L+L+H  +P T++++  +  I+ +     + ++ +SW    ++ R A ++SFG SGTN
Sbjct: 387 AVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSWP-AGERPRRAGVSSFGISGTN 445

Query: 532 AHIVLME 538
           AH+++ E
Sbjct: 446 AHVIVEE 452

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score =  176 bits (450), Expect = 1e-48
 Identities = 90/443 (20%), Positives = 157/443 (35%), Gaps = 76/443 (17%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N  ++FW  L  GR    +I         F+D           +     +       
Sbjct: 15  PGGNGTRQFWELLTSGRTATRRI--------SFFDPSPYR-----SQVAAEADF---DPV 58

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTC----IEDAGYNPFSLSGSLCGVFVGCAVSDYNK 242
                 P E + MD       Q    C       +G +P +L  +  GV +G AV+    
Sbjct: 59  AEG-FGPRELDRMDR----ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAA--- 110

Query: 243 LITDPKMYNAYALMGESVSILPARVSYFL-----------------NLQGPCLAIDTACS 285
             +  + Y   +  G    +  A +S  +                   +GP   + T C+
Sbjct: 111 ATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCT 170

Query: 286 SSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS-----PDGHC 335
           S L ++ +A  ++  G++ +  AG      TP     +  +    +   +     P+   
Sbjct: 171 SGLDSVGNAVRAIEEGSADVMFAGAADTPITP-----IVVACFDAIRATTARNDDPEHAS 225

Query: 336 YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--K 393
             FD   +GFV  EG  + +L+    A   G  I+  I G+    +     +T      +
Sbjct: 226 RPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNA--YHMTGLKADGR 283

Query: 394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSV 453
                      +   +  DI  + AHG+GT+  D  E  A   +  + +       + S+
Sbjct: 284 EMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARR---TPVSSI 340

Query: 454 KSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK 513
           KS +GHS  A G + +   +L+L+H V+PPT N    +    L+  P            +
Sbjct: 341 KSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP---LEA------R 391

Query: 514 NKKKRMAAINSFGFSGTNAHIVL 536
            +K R       GF G  + +VL
Sbjct: 392 ERKLRSVLTVGSGFGGFQSAMVL 414

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score =  174 bits (444), Expect = 1e-47
 Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 63/434 (14%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N V+  W  LL G++ +S I          +D+   A      K  G ++D   F+ 
Sbjct: 30  PVGNTVESTWKALLAGQSGISLI--DH------FDTSAYA-----TKFAGLVKD---FNC 73

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSLCGVFVGCAV----- 237
               IS  E   MD     F+Q         ++D+G      + +  G  +G  +     
Sbjct: 74  EDI-ISRKEQRKMDA----FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGL 128

Query: 238 --SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
              ++  L+   P+  + + +    V+++   ++    L+GP ++I TA +S +  I HA
Sbjct: 129 IEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHA 188

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS-----PDGHCYSFDQRANG 344
              +  G++ + +AGG    +TP     +   G      LS     P      +D+  +G
Sbjct: 189 ARIIAYGDADVMVAGGAEKASTP-----LGVGGFGAARALSTRNDNPQAASRPWDKERDG 243

Query: 345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTKI 402
           FV G+G G+L+L++ + AKK G  IY  + G+G++ D     +T+P  N           
Sbjct: 244 FVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDA--YHMTSPPENGAGAALAMANA 301

Query: 403 YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSAT 462
            +   I  + I  + AHGT T  GD  E +A+   F + +       + S KS  GH   
Sbjct: 302 LRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSMTGHLLG 358

Query: 463 AAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI 522
           AAG +  I  IL+L+ + +PPTIN +  +E   L+  P   +   +   +          
Sbjct: 359 AAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP---HEARQVSGM-----EYTLC 410

Query: 523 NSFGFSGTNAHIVL 536
           NSFGF GTN  ++ 
Sbjct: 411 NSFGFGGTNGSLIF 424

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score =  173 bits (440), Expect = 3e-47
 Identities = 107/434 (24%), Positives = 170/434 (39%), Gaps = 64/434 (14%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N ++ +W  L+ GRN +  I          +D+   A     C+  G ++D   FD 
Sbjct: 19  PIGNTLQDYWQGLMEGRNGIGPI--------TRFDASDQA-----CRFGGEVKD---FDA 62

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSLCGVFVGCAV----- 237
             F +   EA+ MD     F           I DA      L+    GV +G  +     
Sbjct: 63  TQF-LDRKEAKRMDR----FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKV 117

Query: 238 --SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
                  L+   P   + + +     ++     +  L  +GP     TAC++   AI  A
Sbjct: 118 LEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDA 177

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS-----PDGHCYSFDQRANG 344
              +  G +K  + GG     TP     +S +G      LS     P      FD+  +G
Sbjct: 178 FRLVQNGYAKAMICGGTEAAITP-----LSYAGFASARALSFRNDDPLHASRPFDKDRDG 232

Query: 345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTKI 402
           FV GEG G+L+L++L+ A   G  IY  + G+ +  D     ITAP  + +   R     
Sbjct: 233 FVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDA--YHITAPVPDGRGATRAIAWA 290

Query: 403 YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSAT 462
            K   + P  +  + AHGT T   D  E  A+ ++    +Y+    A+ S KS  GH   
Sbjct: 291 LKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYN---IAVSSTKSMTGHLLG 347

Query: 463 AAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI 522
            +G I  +  ++++    +PPTIN    +    L+  P            +     +A  
Sbjct: 348 GSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP---GQS------RALIVDVALS 398

Query: 523 NSFGFSGTNAHIVL 536
           NSFGF G N  +  
Sbjct: 399 NSFGFGGHNVTLAF 412

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score =  173 bits (441), Expect = 3e-47
 Identities = 115/433 (26%), Positives = 177/433 (40%), Gaps = 63/433 (14%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N+VK  W N L G N + KI           D++  +         G L++   F+ 
Sbjct: 40  PIGNDVKTTWENALKGVNGIDKI--------TRIDTEPYS-----VHLAGELKN---FNI 83

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSLCGVFVGCAV----- 237
               I   EA  MD     F Q         ++DA  +    +    GV++G  +     
Sbjct: 84  EDH-IDKKEARRMDR----FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMET 138

Query: 238 --SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
               + +L+   P+  + + +      +   +VS  L  +GP  A  TAC++   +I  A
Sbjct: 139 FEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEA 198

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS----PDGHCYSFDQRANGF 345
              +  G++   + GG     T      M+ +G      LS     +  C  F +  +GF
Sbjct: 199 FKIVQRGDADAMITGGTEAPITH-----MAIAGFSASRALSTNDDIETACRPFQEGRDGF 253

Query: 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--KSQIRLQTKIY 403
           V GEG G+L+++ L+ A+  G +IY  I G+G   D     ITAP    +   R      
Sbjct: 254 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDA--YHITAPAPEGEGGSRAMQAAM 311

Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
               I P D+Q L AHGT T +GD  E +A+  +F + + H     + S KS  GH   A
Sbjct: 312 DDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKH---LKVSSTKSMTGHLLGA 368

Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
            G I  I   LS+K   + PTI+    +    L+  P   N        ++     A  N
Sbjct: 369 TGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP---NEA------QDLDITYAMSN 419

Query: 524 SFGFSGTNAHIVL 536
           S GF G NA +V 
Sbjct: 420 SLGFGGHNAVLVF 432

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score =  172 bits (439), Expect = 4e-47
 Identities = 107/433 (24%), Positives = 177/433 (40%), Gaps = 63/433 (14%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N+ +  W N   G N V+K+  TR       + D         K    L+D   FD 
Sbjct: 16  PIGNDAETSWENAKKGVNGVAKM--TR------LNPDDFP-----VKIAAELKD---FDV 59

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSLCGVFVGCAV----- 237
             + +   EA  MD     F      +    ++D+G      + +  GV++G  +     
Sbjct: 60  EKY-LEKKEARKMDR----FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMET 114

Query: 238 --SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
             + Y   +    +  + + +      +   +VS     +G      TAC+++  +I  A
Sbjct: 115 FETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDA 174

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS----PDGHCYSFDQRANGF 345
              +  G++   + GG     T      MS +G      LS    P+  C  FD+  +GF
Sbjct: 175 FKVIERGDADAMITGGAEAPITK-----MSLAGFTANKALSLNPDPETACRPFDKDRDGF 229

Query: 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTKIY 403
           + GEG G+++L++ + AK  G  IY  I G+G   D     ITAP  N +   R      
Sbjct: 230 IIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDA--YHITAPAPNGEGAARAMKMAI 287

Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
               + P+ +  + AHGT T   D  E +A+   F + +      A+ S KS  GH+  A
Sbjct: 288 DDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKK---LAISSTKSMTGHTLGA 344

Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           +G I  I  +L+++  ++ PTI+    +E   L+  P   N        +     +   N
Sbjct: 345 SGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVP---NEA------REANVNVVISN 395

Query: 524 SFGFSGTNAHIVL 536
           SFGF G NA +V 
Sbjct: 396 SFGFGGHNATLVF 408

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score =  168 bits (428), Expect = 9e-46
 Identities = 91/435 (20%), Positives = 156/435 (35%), Gaps = 69/435 (15%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
              +   +    L  GRN V ++    W          +       +    L     F  
Sbjct: 18  ALGSRWDEIEAALKAGRNAVRRM--PDW----------DYFESLHTRLAAPLPG---FAQ 62

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWT----CIEDAGYNPF-SLSGSLCGVFVGCAV---- 237
                   +   M                  + DAG+    S+S    GV  G +     
Sbjct: 63  PAD-WPRKKTRSMGR----VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVE 117

Query: 238 ---SDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
              +    L +       + + +          VS F +L+G  +   +AC+S   AI +
Sbjct: 118 PIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGY 177

Query: 294 ACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGM--LS-----PDGHCYSFDQRANGFV 346
           A +++ +G   + LAGG   ++ P +        +   S     P      FD + +G V
Sbjct: 178 AYENIAMGKQTLMLAGGAEELSGPAV---AVFDTLYATSTRNDEPHLTPRPFDAKRDGLV 234

Query: 347 PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKF 406
            GEG   L+L++ + AK  G  I+  I G+G N DG    +T P   +  R      +  
Sbjct: 235 VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDG--AHMTQPTASTMARAMQLALEDA 292

Query: 407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGV 466
            ++ N I  + AHGT T  GD  E +A   +F +         + S+KS +GH+  A G 
Sbjct: 293 KLDANAIAYVNAHGTSTDRGDVAESQATARTFGE---R---MPISSLKSYVGHTLGACGA 346

Query: 467 IGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD-IKNKKKRM---AAI 522
           +     I  +K     PT+N   ++               C   D I+ + + +     +
Sbjct: 347 LEAWWTIEMMKRNWYAPTLNLTEVDP-------------ACAPLDYIRGEARAIDAEYVM 393

Query: 523 -NSFGFSGTNAHIVL 536
            N+F F G N  ++ 
Sbjct: 394 SNNFAFGGINTSLIF 408

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score =  168 bits (428), Expect = 9e-46
 Identities = 110/434 (25%), Positives = 167/434 (38%), Gaps = 66/434 (15%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P     + F    L G++ V  I          +D+          +    ++     DP
Sbjct: 14  PIGVGQEAFHKAQLAGKSGVRPI--------TRFDASALP-----VRIAAEVD----VDP 56

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSLCGVFVGCAV----- 237
             + +   E   +D     F+Q         +EDAG  P  L     G  VG  +     
Sbjct: 57  GAY-LDRKELRRLDR----FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMET 111

Query: 238 --SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
             +     +   P   + + +     ++  A ++      GP   + TAC++   A+  A
Sbjct: 112 WEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSA 171

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS-----PDGHCYSFDQRANG 344
              + LG + + LAGG     TP     M+      M  LS     P+     F    +G
Sbjct: 172 LRMIQLGEADLVLAGGTEAAITP-----MAIGAFAVMRALSTRNEEPEKASRPFTLSRDG 226

Query: 345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTKI 402
           FV GEG GVL+L+  + AKK G  IY  + G+G + D   + IT P    K       + 
Sbjct: 227 FVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADA--HHITEPHPEGKGAALAMARA 284

Query: 403 YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSAT 462
            K   I P  +  + AHGT T +GD  E  A+   F   +       + S KS IGH   
Sbjct: 285 LKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKR---LMVSSTKSMIGHLLG 341

Query: 463 AAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI 522
           AAG +  I  + +L H V+PPTIN    +  + L+  P          + +  K   A  
Sbjct: 342 AAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP----------EPREAKVDYALS 391

Query: 523 NSFGFSGTNAHIVL 536
           NSF F G NA +  
Sbjct: 392 NSFAFGGHNAVLAF 405

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score =  166 bits (422), Expect = 1e-44
 Identities = 100/440 (22%), Positives = 172/440 (39%), Gaps = 67/440 (15%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P        W+ L+ G + +  +                ++   +  +         F+ 
Sbjct: 33  PLGVGTHLVWDRLIGGESGIVSL--VGEEYKSI----PCSVAAYV-PRGSDEGQ---FNE 82

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYN 241
             F +S S+ + M                  ++D+G++P S       GV +G  +    
Sbjct: 83  QNF-VSKSDIKSMSS----PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPL- 136

Query: 242 KLITDPKMYNAYALMGES----VS----------ILPARVSYFLNLQGPCLAIDTACSSS 287
                  +              VS          +   +VS    L+GP  A+ TAC++ 
Sbjct: 137 -----EVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTG 191

Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS----PDGHCYSF 338
             A+  +   +  G++ + +AGG     +P     +S +G      LS    P   C  F
Sbjct: 192 AHAVGDSFRFIAHGDADVMVAGGTDSCISP-----LSLAGFSRARALSTNSDPKLACRPF 246

Query: 339 DQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--KSQI 396
             + +GFV GEG  VL+L++ + A +    IY  + G+G++ D     ITAP+   +  +
Sbjct: 247 HPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDA--GHITAPDPEGEGAL 304

Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
           R      K   + P +I  + AH T T LGD  E +A+   F   +Y     A+ S K  
Sbjct: 305 RCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYA---LAVSSTKGA 361

Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
            GH   AAG +      L+  ++ LPPT+N +       L     ++  K + W  + + 
Sbjct: 362 TGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLN----YVPLKAQEWKTEKRF 417

Query: 517 KRMAAINSFGFSGTNAHIVL 536
             +   NSFGF GTNA + +
Sbjct: 418 IGLT--NSFGFGGTNATLCI 435

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score =  166 bits (422), Expect = 1e-44
 Identities = 104/446 (23%), Positives = 171/446 (38%), Gaps = 66/446 (14%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKI----PSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIE 182
           P    V+  W  L+ G   +  +       +   ++      + +   +   +    +  
Sbjct: 13  PLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPG 72

Query: 183 IFDPLFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFS-LSGSLCGVFVGCAV 237
            FD   +      ++ +      F+          + DA + P         GV +G  +
Sbjct: 73  EFDEALW----LNSKAVAN----FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGI 124

Query: 238 SDYNKLITDPKMYNAYALMGES----VS----------ILPARVSYFLNLQGPCLAIDTA 283
                      +  A  L+ E     +S          +    VS     QGP  A  TA
Sbjct: 125 GSI------CDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178

Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS------PD 332
           C++   +I  A   +  G++ + +AGG            +S +G      LS      P 
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDA-----LSVAGFSRSRALSTKFNSSPQ 233

Query: 333 GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP-- 390
                FD   +GFV GEG GV++L++ + AK+ G  IY  + G+G++ D   + IT P  
Sbjct: 234 EASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDA--HHITQPPE 291

Query: 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450
           + K  +   T+  ++  + PN I  + AH T T +GD +E  A+   F++ +      A 
Sbjct: 292 DGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHAT-SGTLAF 350

Query: 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW 510
            S K   GH   AAG +  I  IL++ H V P T+N    +        P    T     
Sbjct: 351 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPL--TTS---- 404

Query: 511 DIKNKKKRMAAINSFGFSGTNAHIVL 536
             K    R A  NSFGF GTNA ++ 
Sbjct: 405 --KKMLVRTAMSNSFGFGGTNASLLF 428

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score =  163 bits (416), Expect = 6e-44
 Identities = 96/437 (21%), Positives = 156/437 (35%), Gaps = 75/437 (17%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
              +N ++   +L   ++ +S+           Y           C+  G+ +     D 
Sbjct: 35  SIGSNTEEVTASLREAKSGISRAEE--------YAELGFR-----CQVHGAPD----IDI 77

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWT----CIEDAGYNPFSLSGSLCGVFVGCA------ 236
               +      +                   I DAG     +S    G+ +G        
Sbjct: 78  ESL-VDRRAMRFHGR----GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRT 132

Query: 237 -VSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
            V   +      PK    +A+     S   A ++ F  ++G   +I +AC++S   I +A
Sbjct: 133 IVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNA 192

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG-----MLS-----PDGHCYSFDQRANG 344
            + +  G      AGG       D+   +S        M S     P     ++D+  +G
Sbjct: 193 YEMIQYGKQDRMFAGG-----CEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDG 247

Query: 345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIR-----LQ 399
           FV   G GVL+L+ L+ A   G  IY  I G+G   DG    + AP+ +  IR     L 
Sbjct: 248 FVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDG--YDMVAPSGEGAIRCMKMALS 305

Query: 400 TKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGH 459
           T          + I  +  H T T  GD  E EA+ + F           + + KS  GH
Sbjct: 306 TV--------TSKIDYINPHATSTPAGDAPEIEAIRQIFGA---GDVCPPIAATKSLTGH 354

Query: 460 SATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRM 519
           S  A GV   I  +L +++  +  + +   L+      + P           I N +   
Sbjct: 355 SLGATGVQEAIYSLLMMQNNFICESAHIEELDP--AFADMPIVRKR------IDNVQLNT 406

Query: 520 AAINSFGFSGTNAHIVL 536
              NSFGF GTNA +V 
Sbjct: 407 VLSNSFGFGGTNATLVF 423

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score =  163 bits (415), Expect = 1e-43
 Identities = 100/447 (22%), Positives = 161/447 (36%), Gaps = 80/447 (17%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P     +  W  L+ G + + ++     I  +        +G T+  +  + +    FDP
Sbjct: 36  PLGCGKELVWQRLIGGGSGLRRL--GDDIAGEL----SAKVGGTV--QDVAEDPEGGFDP 87

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYN 241
               +   E   MD     F+Q         + +AG+ P +          V   +  + 
Sbjct: 88  ERS-VPHKELRKMDR----FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGF- 141

Query: 242 KLITDPKMYNAYALMGES----VS----------ILPARVSYFLNLQGPCLAIDTACSSS 287
                P +  A  +        +S          +   ++S     +GP     TAC++S
Sbjct: 142 -----PGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAAS 196

Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS------PDGHCY 336
           + AI  A   +  G + + LAGG            +S  G      LS      P     
Sbjct: 197 VQAIGDAMRMIRTGEADVVLAGGAEAAFDK-----VSLGGFAAARALSTGFSEEPVRASR 251

Query: 337 SFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--KS 394
            FD+  +GFV GEG  +++++ L  A   G      I G+G   D     +TA       
Sbjct: 252 PFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADA--YHMTAGPDDGSG 309

Query: 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVK 454
            +R      +  ++ P  +  + AH T T +GD  E EAL   F   +      A+ S K
Sbjct: 310 AMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGP----AISSTK 365

Query: 455 SNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD-IK 513
           S  GH   AAG I     IL+L+  VLP T+N    +                   D I 
Sbjct: 366 SATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDP-------------AADGLDLIG 412

Query: 514 NKKKRM---AAI-NSFGFSGTNAHIVL 536
              + +    A+ N FGF G NA ++ 
Sbjct: 413 PAARHVPVEIALSNGFGFGGVNASVLF 439

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score =  162 bits (413), Expect = 2e-43
 Identities = 101/433 (23%), Positives = 164/433 (37%), Gaps = 66/433 (15%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P  N  ++FWN+L  G+  +  I  T+      +D                ++D   F  
Sbjct: 35  PIGNTPEEFWNSLATGKIGIGGI--TK------FDHSDFD-----VHNAAEIQD---FPF 78

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSLCGVFVGCAV----- 237
             +     +    D     +           +  A  +  +L+    GV V   +     
Sbjct: 79  DKY-FVKKDTNRFDN----YSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKE 133

Query: 238 --SDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHA 294
                 +L    PK      L     ++    V+      G C +I+TACSSS  AI  A
Sbjct: 134 IEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDA 193

Query: 295 CDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS----PDGHCYSFDQRANGF 345
             S+  G   + L GG     TP      + +G   +  LS    P      FD+  NGF
Sbjct: 194 FRSIKFGFQDVMLVGGTEASITP-----FAIAGFQALTALSTTEDPTRASIPFDKDRNGF 248

Query: 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--KSQIRLQTKIY 403
           V GEG G+L+L+ L+ A+K G  I   + G+G   D     +T+P+   +  I+      
Sbjct: 249 VMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDA--YHMTSPHPEGQGAIKAIKLAL 306

Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
           ++  I+P  +  + AHGT T   +  E  A+               + S KS  GH   A
Sbjct: 307 EEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVL------GKEVPVSSTKSFTGHLLGA 360

Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
           AG +  I  I +++H  +P T   + ++++I+                   K+   A  N
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY---GQG------LEKEIPYAISN 411

Query: 524 SFGFSGTNAHIVL 536
           +FGF G NA +  
Sbjct: 412 TFGFGGHNAVLAF 424

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score =  161 bits (411), Expect = 2e-43
 Identities = 88/428 (20%), Positives = 159/428 (37%), Gaps = 58/428 (13%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P    +  +W+ +L GR+ +  +  TR      +D  +           G ++D   F  
Sbjct: 21  PNGLGLAPYWSAVLDGRHGLGPV--TR------FDVSRYP-----ATLAGQIDD---FHA 64

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAV-------SD 239
               I        DP  RL L      ++DA  +P SL+    GV    A         +
Sbjct: 65  PDH-IPGRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHRE 123

Query: 240 YNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSL 298
           + KL ++ PK  + Y       ++   ++S    ++GP  A+    +  L A+ HA  ++
Sbjct: 124 FRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTI 183

Query: 299 ILGNSKIALAGGVYIINTPDIHIKMSKSG-----MLS----PDGHCYSFDQRANGFVPGE 349
             G + + ++GGV     P                +S    PD     FD+RA G+VPGE
Sbjct: 184 RRG-TPLVVSGGVDSALDP-----WGWVSQIASGRISTATDPDRAYLPFDERAAGYVPGE 237

Query: 350 GVGVLMLKKLKDAKKDG-DDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNI 408
           G  +L+L+    A+  G  D Y  + G     D      +      +  ++  +      
Sbjct: 238 GGAILVLEDSAAAEARGRHDAYGELAGCASTFDP--APGSGRPAGLERAIRLAL-NDAGT 294

Query: 409 NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
            P D+ ++ A G G    D  E  A+   F +         +   K+  G   +  G + 
Sbjct: 295 GPEDVDVVFADGAGVPELDAAEARAIGRVFGREGV-----PVTVPKTTTGRLYSGGGPLD 349

Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS 528
           ++  ++SL+  V+ PT     +     ++               ++   R A + + G  
Sbjct: 350 VVTALMSLREGVIAPTAGVTSVPREYGIDLVL---GEP------RSTAPRTALVLARGRW 400

Query: 529 GTNAHIVL 536
           G N+  VL
Sbjct: 401 GFNSAAVL 408

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score =  160 bits (407), Expect = 9e-43
 Identities = 111/442 (25%), Positives = 191/442 (43%), Gaps = 72/442 (16%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
           P A+ V++ W  LL G +   ++  T + +DD        I   I    G+      F+P
Sbjct: 22  PLASGVEETWKRLLAGESGARRV--TEFEVDDL----ACQIACRIPVGDGTNGT---FNP 72

Query: 187 LFFNISPSEAEYMDPQQRLFLQ----NCWTCIEDAGYNPFSLSGSL-CGVFVGCAVSDYN 241
               + P E   +DP    F+          ++DAG++P +    +  GV +G  +    
Sbjct: 73  DLH-MDPKEQRKVDP----FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGI- 126

Query: 242 KLITDPKMYNAYALMGES----VS----------ILPARVSYFLNLQGPCLAIDTACSSS 287
                  +  A   + +     +S          +    VS    L+GP  ++ TAC++ 
Sbjct: 127 -----EGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATG 181

Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS------PDGHCY 336
             AI  A   +  G++ + +AGG     +      +S +G      LS      P     
Sbjct: 182 THAIGDAARLIAFGDADVMVAGGTESPVSR-----ISLAGFAACKALSTERNDDPTAASR 236

Query: 337 SFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP--NTKS 394
            +D+  +GFV GEG G+++L++L+ A   G  IY  + G+G++ D     ITAP  + + 
Sbjct: 237 PYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDA--FHITAPTESGEG 294

Query: 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVK 454
             R      K+  I P++I  + AHGT T + D IE  A+     + +      ++ S K
Sbjct: 295 AQRCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAK---ISMSSTK 350

Query: 455 SNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN 514
           S+IGH   AAG    +   L+++  + P T+N +      +++  P   +        + 
Sbjct: 351 SSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVP---HKP------RE 401

Query: 515 KKKRMAAINSFGFSGTNAHIVL 536
           +K  +A  NSFGF GTNA +VL
Sbjct: 402 RKIDVALSNSFGFGGTNASLVL 423

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score =  159 bits (404), Expect = 1e-42
 Identities = 104/446 (23%), Positives = 172/446 (38%), Gaps = 83/446 (18%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
              NN ++   +L  GR+ ++                            G+++     D 
Sbjct: 14  SIGNNQQEVLASLREGRSGITFSQE--------LKDSGMR-----SHVWGNVK----LDT 56

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTC----IEDAGYNPFSLSGSL-CGVFVGCA----- 236
               I      +M           +      I DAG +P +   +   G+  G       
Sbjct: 57  TGL-IDRKVVRFMSD----ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPR 111

Query: 237 --VSDYNKLITD--PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
             V   + +      K    Y +     S + A ++    + G   +I +AC++S   I 
Sbjct: 112 FQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIG 171

Query: 293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSK--SGM--LS------PDGHCYSFDQRA 342
           +A + + LG   I  AGG       ++  +M+     M  LS      P+    ++D   
Sbjct: 172 NAVEQIQLGKQDIVFAGG-----GEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHR 226

Query: 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIR----- 397
           +GFV   G G++++++L+ A   G  IY  I G+G   DG    + AP+ +  +R     
Sbjct: 227 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDG--ADMVAPSGEGAVRCMKMA 284

Query: 398 LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI 457
           +              I  L +HGT T +GD  E  A+ E F   S      A+ + K+  
Sbjct: 285 MHGV--------DTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSP-----AISATKAMT 331

Query: 458 GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKK 517
           GHS  AAGV   I  +L L+H  + P+IN   L+E          I T+    ++     
Sbjct: 332 GHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAG----LNIVTETTDRELT---- 383

Query: 518 RMAAI-NSFGFSGTNAHIVLMEKIKN 542
               + NSFGF GTNA +V M K+K+
Sbjct: 384 --TVMSNSFGFGGTNATLV-MRKLKD 406

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score =  159 bits (406), Expect = 2e-42
 Identities = 101/441 (22%), Positives = 173/441 (39%), Gaps = 80/441 (18%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
             A + +  W  LL  ++ +  +      +++F             +  G L +    + 
Sbjct: 40  ALATDAETTWKLLLDRQSGIRTL--DDPFVEEFDLP---------VRIGGHLLE----EF 84

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD 246
               ++  E   M   QR+         E+AG     +  +   V +G  +         
Sbjct: 85  DHQ-LTRIELRRMGYLQRMSTVLSRRLWENAGSPE--VDTNRLMVSIGTGLGSA------ 135

Query: 247 PKMYNAYALMGES----VS----------ILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
            ++  +Y  M       VS             A V    + +   +   +AC+S   AIA
Sbjct: 136 EELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIA 195

Query: 293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG------MLS-----PDGHCYSFDQR 341
            A   ++LG +  A+ GGV           +  +G      ++S     P G C  FD+ 
Sbjct: 196 RAWQQIVLGEADAAICGGVETRIEA-----VPIAGFAQMRIVMSTNNDDPAGACRPFDRD 250

Query: 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--KSQIRLQ 399
            +GFV GEG  +L+++  + AK  G +I   I G  +  DG    + AP+   +      
Sbjct: 251 RDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDG--FHMVAPDPNGERAGHAI 308

Query: 400 TKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGH 459
           T+  +   + P DI  + AH TGT++GD  E  A+  +      ++   A+ + KS +GH
Sbjct: 309 TRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGG---NR--PAVYAPKSALGH 363

Query: 460 SATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRM 519
           S  A G +  I  +L+L+ +V+PPT+N   L+  I L+                 + +  
Sbjct: 364 SVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA-------------GEPRPG 410

Query: 520 ---AAI-NSFGFSGTNAHIVL 536
               AI NSFGF G N  I  
Sbjct: 411 NYRYAINNSFGFGGHNVAIAF 431

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score =  158 bits (402), Expect = 4e-42
 Identities = 97/436 (22%), Positives = 164/436 (37%), Gaps = 72/436 (16%)

Query: 127 PKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDP 186
             + +++  W  LL G + +  +      +  +  +          K  G L+D      
Sbjct: 24  SISPDIESTWKGLLAGESGIHAL--EDEFVTKWDLA---------VKIGGHLKD----PV 68

Query: 187 LFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD 246
               +   +   M   QR+         E AG     +      V VG  +         
Sbjct: 69  DSH-MGRLDMRRMSYVQRMGKLLGGQLWESAGSPE--VDPDRFAVVVGTGLGGA------ 119

Query: 247 PKMYNAYALMGES----VS----------ILPARVSYFLNLQGPCLAIDTACSSSLVAIA 292
            ++  +Y LM       VS             A +   L  +   +   +ACSS   AIA
Sbjct: 120 ERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIA 179

Query: 293 HACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG---M--LS-----PDGHCYSFDQRA 342
           HA   +++G++ +A+ GGV           +  +    M  +S     P+     FD+  
Sbjct: 180 HAWRQIVMGDADVAVCGGVEGPIEA-----LPIAAFSMMRAMSTRNDEPERASRPFDKDR 234

Query: 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT--KSQIRLQT 400
           +GFV GE   +++++  + AK  G      + G G+  D     + AP        R  T
Sbjct: 235 DGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDA--FHMVAPAADGVRAGRAMT 292

Query: 401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS 460
           +  +   ++P DI  + AHGT T +GD  E  A+  +           A+ + KS +GHS
Sbjct: 293 RSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCD---Q---AAVYAPKSALGHS 346

Query: 461 ATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520
             A G +  +  +L+L+  V+PPT+NY   +  I L+               +    R A
Sbjct: 347 IGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVA---GEP------RYGDYRYA 397

Query: 521 AINSFGFSGTNAHIVL 536
             NSFGF G N  +  
Sbjct: 398 VNNSFGFGGHNVALAF 413

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score =  151 bits (384), Expect = 1e-37
 Identities = 57/416 (13%), Positives = 117/416 (28%), Gaps = 88/416 (21%)

Query: 184  FDPLFFNISPSEAEYMDPQQRLFLQNCWTC------IEDAGYNPFS-----LSGSLCGVF 232
            ++   + IS      +DP         +           +G          +  S  G  
Sbjct: 994  WNAKTYGISDDIISQVDP----ITL--FVLVSVVEAFIASGITDPYEMYKYVHVSEVGNC 1047

Query: 233  VGCAVSDYNKLITDPKMYNAYALMGESVS-ILPAR---------VSYFLNLQGPCLAIDT 282
             G  +     +     M+          + IL                ++  GP      
Sbjct: 1048 SGSGMG---GVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVG 1104

Query: 283  ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH----IK-MSKS-----GMLSPD 332
            AC++S+ ++    ++++ G ++I + GG              +K  S +        +P 
Sbjct: 1105 ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPA 1164

Query: 333  GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP-- 390
                      NGF+  +G G+ ++ +   A K G  IY I+       D    G + P  
Sbjct: 1165 EMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDK--IGRSVPAP 1222

Query: 391  --------------------NTKSQIRLQTKIYKKFNIN---PNDIQLLEAHGTGTKLGD 427
                                N   + R +  + ++  I     N+++ L+         D
Sbjct: 1223 GKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSED 1282

Query: 428  PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY 487
              EF        +  +++    L + +   G+                  + +    +  
Sbjct: 1283 QNEFLL---ERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGV 1339

Query: 488  NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS-FG-FSGTNAHIVLMEKIK 541
               + H          +TK       N K   A IN        +  + V+    K
Sbjct: 1340 --ASFHG--------TSTK------ANDKNESATINEMMKHLGRSEGNPVIGVFQK 1379

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243

 Score =  110 bits (277), Expect = 2e-27
 Identities = 78/210 (37%), Positives = 128/210 (60%), Gaps = 12/210 (5%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           + ++V+G+   FS +  + QYKV+I+TGY NYF+ G +K       + + R T  +   +
Sbjct: 28  SPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASK-------EFLIRKTRGEVEVL 80

Query: 646 PLY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
            L      C+IP+IAAMQGH+ G G  +GL+ D+ +FS+ESVY + +M+YGFTP   ++L
Sbjct: 81  DLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSL 140

Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKEL 760
           I  ++ G  L++E+++T   ++GKEL ERGI  PV+ R+ VL Y+ +L +K++   +  L
Sbjct: 141 ILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSL 200

Query: 761 ELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
              K++ S  ++ K       EL +H  TF
Sbjct: 201 VALKQHLSADIKAKFPEAIKKELEIHQVTF 230

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score =  108 bits (271), Expect = 4e-24
 Identities = 46/306 (15%), Positives = 88/306 (28%), Gaps = 54/306 (17%)

Query: 184  FDPLFFNISPSEAEYMDPQQRLFLQNCWT------CIEDAGYNPFSLSG-----SLCGVF 232
            +D   + +     + +DP         +        +  +G             S  G  
Sbjct: 1168 WDARRYGVPEDIIQQVDP----VTL--YVLVSVAEALLSSGITDPYEFYKYVHLSEVGNC 1221

Query: 233  VGCAVSDYNKLITDPKMYNAYALMGESVS-ILPAR---------VSYFLNLQGPCLAIDT 282
            +G  V           MY    L       IL                L+  GP      
Sbjct: 1222 IGSGVGG---TSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVG 1278

Query: 283  ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH----IK-MSKSGMLS-----PD 332
            AC++++ ++    D+++ G +++ L GG         +    +   S +         P 
Sbjct: 1279 ACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPG 1338

Query: 333  GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT 392
                      NGF+  +G GV ++   + A + G  IY I+       D    G + P  
Sbjct: 1339 EMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDK--IGRSVPAP 1396

Query: 393  -KSQIRLQTKIYKKFNINPNDI-----------QLLEAHGTGTKLGDPIEFEALCESFNK 440
             +  +    +    F     DI           Q ++       L    E  A+    ++
Sbjct: 1397 GQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSE 1456

Query: 441  FSYHKN 446
                 +
Sbjct: 1457 EDGPFD 1462

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score = 98.5 bits (245), Expect = 5e-21
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 404  KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK-FSYHKNFCALGSVKSNIGHSAT 462
              + +  +D+ +   HGT T   D  E + +C+          N       K   GH   
Sbjct: 1508 ATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKG 1567

Query: 463  AAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI 522
            AAG   +   +  L   ++P   N + +++ ++  +   + +   K+  IK       ++
Sbjct: 1568 AAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKA-----FSV 1622

Query: 523  NSFGFSGTNAHIVL 536
             SFGF    A  + 
Sbjct: 1623 TSFGFGQKGAQAIG 1636

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score =  101 bits (252), Expect = 7e-22
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 6/152 (3%)

Query: 386  GITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHK 445
            G        +I         + +  +D+ +   HGT TK  D  E   + E        +
Sbjct: 1509 GNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSE 1568

Query: 446  -NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFIN 504
             N       K   GH   AAG   M   +  L   ++P   N + +++ ++      + +
Sbjct: 1569 GNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPS 1628

Query: 505  TKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
               K+  ++       +I SFGF       ++
Sbjct: 1629 KTLKTDGVRA-----VSITSFGFGQKGGQAIV 1655

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score =  100 bits (251), Expect = 1e-21
 Identities = 46/365 (12%), Positives = 104/365 (28%), Gaps = 70/365 (19%)

Query: 184  FDPLFFNISPSEAEYMDPQQRLFLQNCWT------CIEDAGYNPFS-----LSGSLCGVF 232
            ++   + IS      +DP         +           +G          +  S  G  
Sbjct: 1193 WNAKTYGISDDIISQVDP----ITL--FVLVSVVEAFIASGITDPYEMYKYVHVSEVGNC 1246

Query: 233  VGCAVSDYNKLITDPKMYNAYALMGESVS-ILPAR---------VSYFLNLQGPCLAIDT 282
             G  +     +     M+          + IL                ++  GP      
Sbjct: 1247 SGSGMG---GVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVG 1303

Query: 283  ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-----------IKMSKSGMLSP 331
            AC++S+ ++    ++++ G ++I + GG                     ++  + G  +P
Sbjct: 1304 ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHG-RTP 1362

Query: 332  DGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDG--------- 382
                       NGF+  +G G+ ++ +   A K G  IY I+       D          
Sbjct: 1363 AEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPG 1422

Query: 383  -----------KTNGITAPNTKSQIRLQTKIYKKFNIN---PNDIQLLEAHGTGTKLGDP 428
                        +    +PN   + R +  + ++  I     N+++ L+         D 
Sbjct: 1423 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQ 1482

Query: 429  IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN 488
             EF        +  +++    L + +   G+                  + +    +   
Sbjct: 1483 NEFLL---ERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGV- 1538

Query: 489  ILNEH 493
              + H
Sbjct: 1539 -ASFH 1542

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280

 Score = 95.0 bits (237), Expect = 1e-21
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 30/215 (13%)

Query: 586 NSTVVKGITDAFSYINS--SVQYKVIIITGYENYFACGG----------------TKEGL 627
           N+ +   I  A    +   S+   + ++TG  +Y++ G                  K   
Sbjct: 51  NTEMYHEIMRALKAASKDDSI---ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNA 107

Query: 628 LKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPY 687
           + +++ +  F D            P+IA + G A+G    +    D    S+ + + +P+
Sbjct: 108 VLLREFVGCFID---------FPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPF 158

Query: 688 MRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLK 747
              G +P   S+  FP+      + E+L    +    E   +G+   V P          
Sbjct: 159 SHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWT 218

Query: 748 LAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
             K  + L    L + K+      ++KL  +   E
Sbjct: 219 RLKAFAKLPPNALRISKEVIRKREREKLHAVNAEE 253

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291

 Score = 94.7 bits (236), Expect = 2e-21
 Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 10/205 (4%)

Query: 586 NSTVVKGITDAFSYINS-SVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKS- 642
           N+ V+K I +A +   +     K+++ +   + F CG      +  ++   +  + E   
Sbjct: 49  NTEVIKEIVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVD 106

Query: 643 YCMPLY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
                       K P++ ++ G AIG G ++   CD    +E++ +Q+PY  +G +P   
Sbjct: 107 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 166

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSK 757
           S++ FP+  GK  + E+L    +   +E   +G+   V          +   K+L+  + 
Sbjct: 167 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNP 226

Query: 758 KELELQKKYYSHSLQKKLSTIFLHE 782
             LE  K     +++ +L      E
Sbjct: 227 IVLEECKALVRCNIKLELEQANERE 251

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263

 Score = 91.1 bits (227), Expect = 1e-20
 Identities = 43/219 (19%), Positives = 88/219 (40%), Gaps = 24/219 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-------------TKEGLLKIQK 632
                +   DAF  I+     +V+I+TG  + +                   +   + +K
Sbjct: 49  TGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKK 108

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQ-SPYMRYG 691
            +    D          ++PVI+A+ G A+       L  D  + SE +V+Q  P++  G
Sbjct: 109 VLQNLLD---------IEVPVISAVNGAALLHS-EYILTTDIILASENTVFQDMPHLNAG 158

Query: 692 FTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
             PG G  +++P   G    R  LFT  +   ++  E  +   VLP+ +++  + ++A+ 
Sbjct: 159 IVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIART 218

Query: 752 LSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
           L+      L   +   +  L++ ++    + L +   T 
Sbjct: 219 LAKQPTLNLRYTRVALTQRLKRLVNEGIGYGLALEGITA 257

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261

 Score = 91.1 bits (227), Expect = 2e-20
 Identities = 44/214 (20%), Positives = 88/214 (41%), Gaps = 28/214 (13%)

Query: 586 NSTVVKGITDAFSYINS-SVQYKVIIITGYENYFACGG----------------TKEGLL 628
           N  V++ +  A S   +     K+++++   + F CG                 + +   
Sbjct: 31  NPEVMREVQSALSTAAADDS--KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 88

Query: 629 KIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYM 688
            I+  ++ F            K P+I A+ G AIG G ++   CD    +E++ +Q+PY 
Sbjct: 89  AIRNFVNTFIQ---------FKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYT 139

Query: 689 RYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            +G +P   ST++FP+  G   + E+L +  +   +E   +G+   V          +  
Sbjct: 140 TFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVR 199

Query: 749 AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
            K+L+  +   LE  K     +++ +L      E
Sbjct: 200 IKELASCNPVVLEESKALVRCNMKMELEQANERE 233

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 22/204 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG------------TKEGLLKIQKG 633
             T+ + + +A    +       ++I G    F+ G               + L    + 
Sbjct: 29  GPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFEL 87

Query: 634 ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT 693
             R               PV+ A  GHAI  G  +    D+ + +     Q+  +  G T
Sbjct: 88  SYRLLS---------YPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMT 138

Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
               +  +   R      ++    A  F G+     G    +   + VL  + + A++ +
Sbjct: 139 IPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFA 198

Query: 754 LLSKKELELQKKYYSHSLQKKLST 777
            L+++     K        K +  
Sbjct: 199 GLNQQAHNATKLRARAEALKAIRA 222

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 15/203 (7%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG------TKEGLLKIQKGISRFTD 639
           ++ +++ ++       +    + +++TG    F  GG      T        + +   T 
Sbjct: 31  DTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAADAANRVVRAITS 90

Query: 640 EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
                       PVIA + G A+G G ++ L CD  + +  S +Q  + R G  P  G++
Sbjct: 91  ---------LPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGAS 141

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
            + P   G+  +  +  TA +       E G+   +    +       + + +S      
Sbjct: 142 ALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLA 201

Query: 760 LELQKKYYSHSLQKKLSTIFLHE 782
               K+  + +   +L  +   E
Sbjct: 202 FGWTKRALAAATLAELEPVQAIE 224

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265

 Score = 89.2 bits (222), Expect = 8e-20
 Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 12/174 (6%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG-------GTKEGLLKIQKGISRFT 638
              + + +  A+  ++     +VI++TG    F  G        T           S   
Sbjct: 32  TVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSASPVQ 91

Query: 639 DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGS 698
                      + PVIAA+ GHAIG G  + L  D  I +EE  Y  P +R+G  P A +
Sbjct: 92  PA-----AFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALA 146

Query: 699 TLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
               P+  G  ++ E+L T + F  +   E G++   LP  +VL  +L++A  +
Sbjct: 147 HWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDI 200

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280

 Score = 89.3 bits (222), Expect = 8e-20
 Identities = 38/218 (17%), Positives = 64/218 (29%), Gaps = 21/218 (9%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG------------GTKEGLLKIQKG 633
                  + +     + +      II     +F+ G             T +   +  K 
Sbjct: 34  EGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKW 93

Query: 634 ISRFTDEKSYCMPLY--CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVY-QSPYMRY 690
           +S F     Y    +      +I  + G AIG   A+   CD      + VY   P+   
Sbjct: 94  VSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANL 153

Query: 691 GFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSL---- 746
           G     G+T+  P +FG   + E L     FK   + E G              +     
Sbjct: 154 GLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKV 213

Query: 747 --KLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
             +L +K+  L        KK    +     +     E
Sbjct: 214 LEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVE 251

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 23/213 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG------------TKEGLLKIQKG 633
            ST    +   F  I    + KV+I+TG    F                  E + + Q+ 
Sbjct: 41  TSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRL 100

Query: 634 ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVY-QSPYMRYGF 692
           ++              ++PVIAA+ G    A   + +  D  + +E + +   P+   G 
Sbjct: 101 LNNLLS---------IEVPVIAAVNGPVTNAP-EIPVMSDIVLAAESATFQDGPHFPSGI 150

Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
            PG G+ +++P   G    R  L T  E   +   + G    VL  +++L  + +LA+ +
Sbjct: 151 VPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGI 210

Query: 753 SLLSKKELELQKKYYSHSLQKKLSTIFLHELTM 785
           +          +K  +  L++ +       L  
Sbjct: 211 AEKPLLARRYARKVLTRQLRRVMEADLSLGLAH 243

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266

 Score = 86.8 bits (216), Expect = 5e-19
 Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 9/186 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
              +   I  A    + +   +V+++ G E+ F  G   K+ +  +Q   +    +    
Sbjct: 30  YGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPP- 88

Query: 645 MPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
             L         P+I A++G AIG G  + L  D       +++Q P++  G +P  G++
Sbjct: 89  FVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGAS 148

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
            +  ++ G   + E+LFTA +F  +   + G+   ++        +   A+ L+ L    
Sbjct: 149 QLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLAS 206

Query: 760 LELQKK 765
           L+  K 
Sbjct: 207 LKQTKA 212

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256

 Score = 86.4 bits (215), Expect = 6e-19
 Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 22/210 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG-------------GTKEGLLKIQK 632
           N  +      A        Q  V+++TG    F+ G                EG    + 
Sbjct: 31  NEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRG 90

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
            I                 P+I A+ G  +G G  +  + D    S  +  + P+   G 
Sbjct: 91  LIKALAG---------FPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGV 141

Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
            P A S+ + PQ  G+  +  +L ++     +E    G+   +   +++L  + + A+ L
Sbjct: 142 APEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEIL 201

Query: 753 SLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
           +      L   K       + +++     E
Sbjct: 202 AAKPISSLMAVKHTMVEPNRAQIAAASARE 231

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272

 Score = 86.1 bits (214), Expect = 1e-18
 Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 8/211 (3%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
              + + + D +  I+     +V+++ G    F+ GG  +     I     R    +   
Sbjct: 38  GPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREA- 96

Query: 645 MPLY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
             L         PV++A++G A+GAG  + L  D ++ S  +     + + G   G  + 
Sbjct: 97  RDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAA 156

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
           + +P   G   ++  L T     G+E +  G+    +   +VL  + +LA+ L+  ++  
Sbjct: 157 ICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNA 216

Query: 760 LELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
           +   K+  +H  +      F   L +    F
Sbjct: 217 IRWTKRSLNHWYR-MFGPTFETSLGLEFLGF 246

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264

 Score = 85.3 bits (212), Expect = 2e-18
 Identities = 31/172 (18%), Positives = 73/172 (42%), Gaps = 5/172 (2%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
              + +G+   +  + +    + +++ G    F+ GG+   + +++              
Sbjct: 35  PPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEAR 94

Query: 646 PLY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
            L         PV+AA++  A+GAG A+ L  D  +  + +     ++R G   G  + L
Sbjct: 95  DLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVL 154

Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           ++P   G   ++  L       G+E +  G+    +  ++V   +L++A++L
Sbjct: 155 LWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERL 206

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298

 Score = 84.7 bits (210), Expect = 4e-18
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
              +  G   A     +    +VI++TG    F  G              +    + +  
Sbjct: 55  GPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANL 114

Query: 645 MPLY----------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP 694
             L            + PVIAA+ G  +G G    L CD    +  + + + + R G   
Sbjct: 115 ADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIA 174

Query: 695 GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
             G + I P+     ++ ++L +   F  +E  + G+   V+  +Q++  +L+ A+ +
Sbjct: 175 EFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDI 232

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256

 Score = 83.8 bits (208), Expect = 5e-18
 Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 12/200 (6%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKE--GLLKIQKGISRFTDEKS 642
           ++ +      A S   +     V+I+TG +  F  G   KE     ++     ++ D   
Sbjct: 34  SAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTTELPDISPKWPD--- 90

Query: 643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF 702
                    PVI A+ G A+  G  + L+CD  I SE + +   + R G  P  G ++  
Sbjct: 91  ------MTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRL 144

Query: 703 PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELEL 762
           PQ+ G  L+R +  T      ++    G+   V+    +L  + ++A  +   ++K +  
Sbjct: 145 PQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRA 204

Query: 763 QKKYYSHSLQKKLSTIFLHE 782
               Y      +       E
Sbjct: 205 LLDSYHRIDALQTGGALWAE 224

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257

 Score = 83.4 bits (207), Expect = 7e-18
 Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 16/206 (7%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
              +   +T A     +    + ++ITG    F  G        +  G++   D      
Sbjct: 28  TEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGE------DL-SGVTEEMDHGDVLR 80

Query: 646 PLY---------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
             Y          + PV+AA+ G A GAG ++ L CD+ + SE++ +   ++  G  P A
Sbjct: 81  SRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDA 140

Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLS 756
           G     P+  G+  + E+     +   +E    G++  V+P         + A++LS + 
Sbjct: 141 GHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMP 200

Query: 757 KKELELQKKYYSHSLQKKLSTIFLHE 782
            K + L K+    S +         E
Sbjct: 201 TKAIGLIKRLLRESEETTFDRYLERE 226

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263

 Score = 83.5 bits (207), Expect = 7e-18
 Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG----TKEGLLKIQKGISRFTDEK 641
           +  ++  + DA           V++I G    F  G              +G +  TD  
Sbjct: 31  SRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLF 90

Query: 642 SYCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
             C  L   +     P IA ++G A  AG  +   CD    S  + +  P ++ G     
Sbjct: 91  EACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTT 150

Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLS 756
            +  +  +  G+    E+  T + +        G+   +LP   +  +   LA  L+  +
Sbjct: 151 PAVAV-SRVIGRRAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARN 209

Query: 757 KKELELQKKYYSHSLQKKLSTIFLHE 782
           +  L    +  +  L+  L   +   
Sbjct: 210 QAPLRRGLETLNRHLELPLEQAYALA 235

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 17/206 (8%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG--------GTKEGLLKIQKGISRF 637
           +  V+     A           ++I+TG     + G          +  +  + +G +  
Sbjct: 30  SPDVIIAFNAALDQAEKDR--AIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLA 87

Query: 638 TDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTI-FSEESVYQSPYMRYGFTPGA 696
               S         P+I A  GHA+  G  + L  DY I  +         ++ G T   
Sbjct: 88  RRMLS------HPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHH 141

Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLS 756
               +   R  K      +  A  F  +     G    V+  +++   +L +A +L  ++
Sbjct: 142 AGIELARDRLRKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKIN 201

Query: 757 KKELELQKKYYSHSLQKKLSTIFLHE 782
               +  K      L   L      +
Sbjct: 202 MNAHKKTKLKVRKGLLDTLDAAIEQD 227

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334

 Score = 82.9 bits (205), Expect = 3e-17
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 22/189 (11%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG-------YENYFACGG-----TKEGLLKIQKG 633
               V  +     +   S    V+++TG           F  GG      + G       
Sbjct: 82  RPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGD 141

Query: 634 ISRFTDE----KSYCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEES-VY 683
            +   D     + + + +   I      VI  + G A G G ++ + CD T+ S E   +
Sbjct: 142 TADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARF 201

Query: 684 QSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
           +      G   G   +    ++ G+  +REI F    +  +++ + G    V    ++  
Sbjct: 202 KQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELET 261

Query: 744 YSLKLAKKL 752
             L+ A ++
Sbjct: 262 VGLQWAAEI 270

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333

 Score = 81.7 bits (202), Expect = 7e-17
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
           C  P +  + G+ +  G  + L  D  I + ++    P MR    P AG   ++  R G 
Sbjct: 156 CDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGD 212

Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKK 765
             ++ +LFT     G +  E G+++       +   + +L ++++ +   +L + K 
Sbjct: 213 QRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLIMAKL 269

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276

 Score = 80.7 bits (200), Expect = 8e-17
 Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 9/211 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG------TKEGLLKIQKGISRFTD 639
           N  +  G+   +  +      +  +ITG    F+ GG             ++    R   
Sbjct: 53  NDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRDGR 112

Query: 640 EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
           E    M   C+IPV+AA+ G A+G G ++    D    +E +    P+++ G     G  
Sbjct: 113 EIVLGM-ARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGP 171

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
           L +P     +L++E   T +    +   E G++  V      +  ++  AKK+  L ++ 
Sbjct: 172 LTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVAD--DPVAEAIACAKKILELPQQA 229

Query: 760 LELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
           +E  K+  +  L++ +     + L+    +F
Sbjct: 230 VESTKRVLNIHLERAVLASLDYALSAESQSF 260

>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279

 Score = 78.8 bits (195), Expect = 3e-16
 Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 11/214 (5%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG---TKEGLLKIQKGISRFTDEKS 642
           N  ++  +  A++         VI++     +F+ G        +         +  E  
Sbjct: 45  NPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIYAHESR 104

Query: 643 YCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
             +    +      P IAA+QG  I  G  +   CD  I +E++++  P +      G  
Sbjct: 105 RYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI--GGV 162

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSK 757
                    G   ++EILFT      +E+ + G+   V+PR ++   +  LA +++ +  
Sbjct: 163 EYHGHTWELGPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPP 222

Query: 758 KELELQKKYYSHSLQKK-LSTIFLHELTMHDYTF 790
             L   K+  + +L  +           +H    
Sbjct: 223 FALRQAKRAVNQTLDVQGFYAAIQSVFDIHQTGH 256

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269

 Score = 78.4 bits (194), Expect = 4e-16
 Identities = 39/207 (18%), Positives = 82/207 (39%), Gaps = 12/207 (5%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           +   ++ +TDA +          ++ITG E+ F  G   +E  + + KG++   D     
Sbjct: 28  SVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLRE--IPLDKGVAGVRDHFRIA 85

Query: 645 MPLY---------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
              +          K PV+AA+ G A G G  + L  D  I ++ + +   +   G    
Sbjct: 86  ALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGND 145

Query: 696 AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL 755
             ++    +  G   + E++ T      +E K+ G+   V P+ +    + K+A++L+  
Sbjct: 146 TATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAA 205

Query: 756 SKKELELQKKYYSHSLQKKLSTIFLHE 782
                 + K+ +     + +      E
Sbjct: 206 PTHLQVMAKERFHAGWMQPVEECTEFE 232

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276

 Score = 78.4 bits (194), Expect = 5e-16
 Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 8/175 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG--------TKEGLLKIQKGISRF 637
           + T+ + + D    +       V+++TG    +  G            G   +Q+ I R 
Sbjct: 34  SPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRRE 93

Query: 638 TDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
             +  + +      P IA + G   G G++  + CD  I ++E+ +    + +G  PG  
Sbjct: 94  ASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNL 153

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
            +       G   S   + T   F G++  E G+    +P  Q+   +++LA+ L
Sbjct: 154 VSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNL 208

>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263

 Score = 77.6 bits (192), Expect = 6e-16
 Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 27/215 (12%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYEN-YFACGG----------------TKEGLL 628
           ++ +   + +A    N+      II+      YF+ G                  +E L 
Sbjct: 29  DAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLH 88

Query: 629 KIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYM 688
            +   +                   +A + G+A G G+ M L CD  I    + +   + 
Sbjct: 89  VLNHCVLEIFT---------SPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFH 139

Query: 689 RYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLF-YSLK 747
           + G +P  G++   P+  G   +  +L     F  +E    G+   +   KQ L      
Sbjct: 140 KMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKN 199

Query: 748 LAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
             K +S      +   KK       ++L      E
Sbjct: 200 YLKAVSEGYVPAIAATKKLLKGKAAEELKQQLEQE 234

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258

 Score = 77.2 bits (191), Expect = 9e-16
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 12/175 (6%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG--------GTKEGLLKIQKGISRF 637
           +S ++  +  A      S + +  ++  +  +F  G               +   G    
Sbjct: 37  DSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDP 96

Query: 638 TDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
                         P++ A+QG    AG  + L  D  + +  + +    +  G  P  G
Sbjct: 97  WGVVQPRRS----KPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGG 152

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           ST+ FP+  G   +   + T  EF   E     +   V+   + L  +L+ A+++
Sbjct: 153 STVRFPRAAGWTDAMRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERI 207

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275

 Score = 76.8 bits (190), Expect = 1e-15
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 27/182 (14%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG---------GTKEGLLKIQKGISR 636
           N  ++  + D  + I   +  + ++I G  ++F+ G            EGL+  Q     
Sbjct: 41  NDGLMAALKDCLTDIPDQI--RAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRV 98

Query: 637 FTD-EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
           F   +        C++PVIAA++G  IG G  +       +    + Y  P    G   G
Sbjct: 99  FDKIQY-------CRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVG 151

Query: 696 AGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
            G +     R     G     +++ T   +   E    G S  ++        +L+L  +
Sbjct: 152 GGGS----VRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNR 207

Query: 752 LS 753
           ++
Sbjct: 208 VA 209

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 5/168 (2%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           N  V +G+  A   ++SS    V IITG    F  G   K        G +  ++     
Sbjct: 32  NRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKA----FVSGEAVLSERGLGF 87

Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
             +  + P+IAA++G A+  G  + L CD  +    + +  P ++ G   GAG  L  P 
Sbjct: 88  TNVPPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPN 147

Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           R    ++ E+  T   F  ++  + G    ++   Q L  +L+LA K+
Sbjct: 148 RIPYQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKI 195

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279

 Score = 75.7 bits (187), Expect = 4e-15
 Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 20/211 (9%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG------------TKEGLLKIQKG 633
                  + D  + ++     + +++ G    F  GG                LL   + 
Sbjct: 42  TFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRM 101

Query: 634 ISRFTDEKSYCMPLY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
             +          +  C  PVIAA+ G A GAG  + L  D+ +    + +   + R G 
Sbjct: 102 TGQVVRA------VRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGL 155

Query: 693 TPG-AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
           + G  G+  + P+  G   +  +L      +  E +  G+   +    +    +  LA++
Sbjct: 156 SGGDMGAAYLLPRVVGLGHATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARR 215

Query: 752 LSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
           L+          K   +  L   L+     +
Sbjct: 216 LADGPALAHAQTKALLTAELDMPLAAAVELD 246

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273

 Score = 75.3 bits (186), Expect = 5e-15
 Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 29/188 (15%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENY-FACGG----------------TKEGLL 628
               V  + DAFS         VI++TG  +  F  GG                 +  +L
Sbjct: 38  TPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVL 97

Query: 629 KIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYM 688
            +Q+ I                 PVIA ++G+A+G G  + + CD TI ++ +++     
Sbjct: 98  DLQRLIRI------------IPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGP 145

Query: 689 RYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
           + G       +    +  G   +REI +   ++  +E  + G+   V+P ++V   +++ 
Sbjct: 146 KVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQW 205

Query: 749 AKKLSLLS 756
            K++   S
Sbjct: 206 CKEIMKHS 213

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262

 Score = 74.6 bits (184), Expect = 7e-15
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 5/170 (2%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           +      +  AF+  ++  +  V ++ G    F  G   K   +   +G           
Sbjct: 36  DGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKA--MGTDRGNELHPHGPGPM 93

Query: 645 MP--LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF 702
            P  L    PVIAA+ GHA+  G  + L+CD  +  E++V      R+G     G T+  
Sbjct: 94  GPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRL 153

Query: 703 PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           P+  G   + +++ T       E  + G+   V+ R Q    +  LA ++
Sbjct: 154 PRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEI 203

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250

 Score = 74.1 bits (183), Expect = 7e-15
 Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 24/219 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACG-------------GTKEGLLKIQ 631
           + T+   + DA +  N+    + +++ G  E  F+ G               +E + ++ 
Sbjct: 25  SRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVI 84

Query: 632 KGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG 691
                  +            P IAA+ G+AIG G+   L  D  + +  + +  P +++G
Sbjct: 85  DLYQAVLN---------VNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHG 135

Query: 692 FTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
                G+ ++     G    +EI++           +  +   V+    +L  ++  A  
Sbjct: 136 IGCSVGAAIL-GFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHV 194

Query: 752 LSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
           ++          K+  +      L         +H   F
Sbjct: 195 MASYPASAFINTKRAVNKPFIHLLEQTRDASKAVHKAAF 233

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290

 Score = 74.9 bits (185), Expect = 8e-15
 Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 11/191 (5%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
              V+         I+     + ++ITG    F  G   K        G           
Sbjct: 49  AFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRS 108

Query: 645 MPLY---------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
           M L             PVIAA+ G AIG G  + L CD  + S+++ +++  +  G T  
Sbjct: 109 MELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTAS 168

Query: 696 -AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSL 754
             G + + P+  G   + +I+ T  +    E +  G+    +  + +L     + ++++ 
Sbjct: 169 ELGLSYLLPRAIGTSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAG 228

Query: 755 LSKKELELQKK 765
            S+  +EL K+
Sbjct: 229 FSRPGIELTKR 239

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277

 Score = 74.5 bits (184), Expect = 9e-15
 Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 23/181 (12%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG---------GTKEGLLKIQKGISR 636
              V + I  A   +        +++ G    F+ G            E     +  +  
Sbjct: 48  TRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAARVRLEA 107

Query: 637 FTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
                +         P +AA+ G+A+GAG  + L  D+ +  +   + +  +  G  PG 
Sbjct: 108 IDAVAA------IPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGG 161

Query: 697 GSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           G       R     G   ++E++F+   F  +E    G+   ++    V   ++  A++ 
Sbjct: 162 GGM----GRLTRVVGSSRAKELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRY 217

Query: 753 S 753
            
Sbjct: 218 L 218

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263

 Score = 74.1 bits (183), Expect = 1e-14
 Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 33/197 (16%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG-------------GTKEGLLKIQK 632
           N T+   + DA    ++ ++   I++TG E  FA G               +  LL    
Sbjct: 35  NQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWD 94

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
            +++             + P++AA+ G+A+G G  + + CD  I ++ + +  P +  G 
Sbjct: 95  SLTQ------------VRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGI 142

Query: 693 TPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            PG G T    QR     GK  + ++  T      +E +  G+   ++P   +L  +L +
Sbjct: 143 LPGLGGT----QRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAV 198

Query: 749 AKKLSLLSKKELELQKK 765
           A++++ +S+      K 
Sbjct: 199 AQRIARMSRPAGRAVKD 215

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265

 Score = 74.1 bits (183), Expect = 1e-14
 Identities = 31/176 (17%), Positives = 66/176 (37%), Gaps = 14/176 (7%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG---------GTKEGLLKIQKGISR 636
           + T+++ +  A     +    +  ++ G    F  G               L  + GI+ 
Sbjct: 34  DKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINP 93

Query: 637 FTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
           +  +           P++ A+ G  +  G  + L  D  I  E + +    +  G  P  
Sbjct: 94  WQVDGRQL-----SKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFG 148

Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           G+T+ FP+  G   +   + TA  F   E    GI   ++P  + +  ++ +A+ +
Sbjct: 149 GATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTI 204

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 24/188 (12%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG----GTKEGLLKIQKGISRFTDEK 641
           N    + + + F  I+     + ++++G    F  G         +L+            
Sbjct: 29  NRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWY 88

Query: 642 SYCMPLY----------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG 691
              +             C  PVIAA+ G  IG G  +   CD    ++++ +Q   +  G
Sbjct: 89  LRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVG 148

Query: 692 FTPGAGSTLIFPQRFGKI-----LSREILFTASEFKGKELKERGISMPVLPRKQVLF-YS 745
                G+     QR  K+     L  E+ FTA +    E  + G+   V P K V+   +
Sbjct: 149 LAADVGTL----QRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAA 204

Query: 746 LKLAKKLS 753
             LA  +S
Sbjct: 205 FALAADIS 212

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260

 Score = 72.9 bits (180), Expect = 3e-14
 Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 33/214 (15%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG-------------GTKEGLLKIQK 632
            + +++ +  A            I++TG E  FA G                   L    
Sbjct: 32  CNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWD 91

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
            I+R             K PVIAA+ G+A+G G  + + CD     E++ +  P +  G 
Sbjct: 92  HITR------------IKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGT 139

Query: 693 TPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            PGAG T    QR     GK L+ E++ T      ++ K+ G+   + P + ++  +++ 
Sbjct: 140 IPGAGGT----QRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQC 195

Query: 749 AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
           A+K++  SK  + + K+  + + +  L+     E
Sbjct: 196 AEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLE 229

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 35/188 (18%), Positives = 72/188 (38%), Gaps = 23/188 (12%)

Query: 586 NSTVVKGITDAFSYI-NSSVQYKVIIITGYENYFACG-------GTKEGLLKIQKGISRF 637
           NS +V+ +T A     + S   + I++TG    F  G          +   ++ +     
Sbjct: 46  NSQLVEELTQAIRKAGDGSA--RAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAM 103

Query: 638 TDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
                        +PV+ A+ G AIGAG  + + CD  + + ++ +Q P  +YG      
Sbjct: 104 DA---------SPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNW 154

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSK 757
           S        G   +R +L +A +   +     G++  +             A +++ L+ 
Sbjct: 155 SIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADA----QAWAAEIARLAP 210

Query: 758 KELELQKK 765
             ++  K+
Sbjct: 211 LAIQHAKR 218

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253

 Score = 72.5 bits (179), Expect = 3e-14
 Identities = 32/173 (18%), Positives = 69/173 (39%), Gaps = 7/173 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           +  +   +  A   + +    + +++TG    F+ G          + G           
Sbjct: 24  SPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSL 83

Query: 645 MPLY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
           M L+        P +AA+ G A+  G  + L CD  +  EE+      ++ GF     S 
Sbjct: 84  MRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALVSV 143

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           ++  +  G+  ++++L T    + +E K  G+   + P  + L  +  LA+++
Sbjct: 144 IL-VRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEV 195

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265

 Score = 72.6 bits (179), Expect = 3e-14
 Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 6/169 (3%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           N+ V + + DA   +++     V I+TG    F  G   K       +G +   + +   
Sbjct: 40  NAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKA----FARGENVVVEGRGLG 95

Query: 645 MPLY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
                   P+IAA++G+A+  G  + L  D  + + +S +  P ++ G   G G  L  P
Sbjct: 96  FTERPPAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLP 155

Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           +R    ++ E+  T      +     G+   +      L  ++ LA+K+
Sbjct: 156 ERIPYAIAMELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKI 204

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258

 Score = 72.2 bits (178), Expect = 4e-14
 Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 33/214 (15%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG-------------GTKEGLLKIQK 632
           +  +V  I  A    + + + +VI++TG    FA G                        
Sbjct: 30  SRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWD 89

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
            +S              K P+IAA+ G A+G G+ + L CD  + S  + +  P +  G 
Sbjct: 90  RLSI------------VKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGV 137

Query: 693 TPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            PGAG T    QR     G   + E L+T +    KE ++ GI   V+  + ++  +++L
Sbjct: 138 MPGAGGT----QRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRL 193

Query: 749 AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
           A +L+      L L K+    ++   L      E
Sbjct: 194 AGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFE 227

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265

 Score = 71.8 bits (177), Expect = 5e-14
 Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 8/172 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDE---K 641
           ++ +V     A+  I+     +  I+TG  + +  GG   +G +               K
Sbjct: 34  STNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGK 93

Query: 642 SYCMPLYCKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
              +      P+IAA+ G  +G G         D  +  E + +  P ++ G  PGAGS 
Sbjct: 94  GLLLSHTLTKPLIAAVNGACLGGGCEMLQQ--TDIRVSDEHATFGLPEVQRGLVPGAGSM 151

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
           +   ++     + E++ T       E    G+   V+P    L  +  LA +
Sbjct: 152 VRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADR 203

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289

 Score = 72.3 bits (178), Expect = 6e-14
 Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 6/177 (3%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGG-----TKEGLLKIQKGISRFTD 639
               VK +  A +         VII+TG  +  F  GG        G  K   G+     
Sbjct: 53  RPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNV 112

Query: 640 EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
                    C  PV+A + G++IG G  + + CD TI ++ +++     + G   G    
Sbjct: 113 LDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGA 172

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLS 756
               +  G+  +REI F   ++  K+  + G+   V+P   +   +++  +++   S
Sbjct: 173 SYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNS 229

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278

 Score = 71.4 bits (176), Expect = 9e-14
 Identities = 34/179 (18%), Positives = 73/179 (40%), Gaps = 18/179 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG------------GTKEGLLKIQKG 633
           +  +++ + +A+  +++    +  I+TG   YF  G             + +        
Sbjct: 45  SGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSR 104

Query: 634 ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT 693
           I      +        K P+IAA++G AI  G  +    D  + +E + +     ++   
Sbjct: 105 IDALLKGRR------LKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLY 158

Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           P  GS +   ++    ++ ++L T       E KE G+   V+P  Q L  +L++A+ +
Sbjct: 159 PMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEII 217

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278

 Score = 71.4 bits (176), Expect = 9e-14
 Identities = 43/197 (21%), Positives = 76/197 (38%), Gaps = 33/197 (16%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG-------------GTKEGLLKIQK 632
           NS V+  +T A + ++       IIITG    FA G                        
Sbjct: 50  NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWG 109

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
            ++              + P IAA+ G+A+G G  + + CD  I ++ + +  P ++ G 
Sbjct: 110 KLAA------------VRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGV 157

Query: 693 TPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            PG G +    QR     GK  + +++ T       E +  G+   V+P   +L  +   
Sbjct: 158 LPGMGGS----QRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARAT 213

Query: 749 AKKLSLLSKKELELQKK 765
           A  +S +S     + K+
Sbjct: 214 ATTISQMSASAARMAKE 230

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 30/215 (13%), Positives = 61/215 (28%), Gaps = 27/215 (12%)

Query: 586 NSTVVKGITDAFSYI-NSSVQYKVIIITGYENYFACGG------------TKEGLLKIQK 632
           ++ +V+ + D         V   +++  G    F+ G                 +++I+ 
Sbjct: 32  SAELVEALIDGVDAAHREQV--PLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEM 89

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
            + R                 +A   G   GAG  +   C +   + E+ ++ P +++G 
Sbjct: 90  LLQRVAG---------SPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGL 140

Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
             G   T  F    G   +  IL +A  F   E +  G       + Q        A+  
Sbjct: 141 VLG---TRRFRDIVGADQALSILGSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAA 197

Query: 753 SLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHD 787
           + L         +                      
Sbjct: 198 TALDPATRATLHRVLRDDHDDADLAALARSAAQPG 232

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286

 Score = 70.7 bits (174), Expect = 2e-13
 Identities = 29/186 (15%), Positives = 67/186 (36%), Gaps = 9/186 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           +  ++  + +AF  +      + +++      F  G   KE  ++ +     +    + C
Sbjct: 51  SEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKE--MRAEPSREYYEKLFARC 108

Query: 645 MPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
             +   I     PVIA + G A  AG  +   CD  + + ++ +    +  G        
Sbjct: 109 TDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGV 168

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
            +  +  G+  + E+L T       + K  G+   V+  K +      +  K+    +  
Sbjct: 169 AL-SRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAA 227

Query: 760 LELQKK 765
           + + K 
Sbjct: 228 VAMGKA 233

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275

 Score = 70.3 bits (173), Expect = 2e-13
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 10/181 (5%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG------YENYFACGGT----KEGLLKIQKGIS 635
               V  + DAF       +  V+++TG       +  F  GG      EG     +G  
Sbjct: 35  RPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTP 94

Query: 636 RFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
           R        +       VIA + G+AIG G  + L CD TI ++ +++     + G   G
Sbjct: 95  RLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDG 154

Query: 696 AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL 755
              +    +  G+  +REI +   ++  +E +  G+   V+P  ++    ++ AK++   
Sbjct: 155 GFGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSK 214

Query: 756 S 756
           S
Sbjct: 215 S 215

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305

 Score = 70.5 bits (173), Expect = 3e-13
 Identities = 35/183 (19%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 586 NSTVVKGITDAFSYINSSVQ-----YKVIIITGYENYFACGG-TKE-GLLKIQKGISRFT 638
           ++ +V  IT   + +   +         +++    + F  GG       L  +   +R  
Sbjct: 61  STRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLL 120

Query: 639 DEKSYCMPLY--------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY 690
           D    C+            +   IA +QG+A+G G+   L C   I  E  +   P + +
Sbjct: 121 DYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLF 180

Query: 691 GFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK 750
              PG G+     QR    L+++I+   + +  ++L   G+   V+PR Q +    ++ +
Sbjct: 181 DLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIR 240

Query: 751 KLS 753
           +  
Sbjct: 241 ESK 243

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261

 Score = 69.4 bits (171), Expect = 4e-13
 Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 30/214 (14%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG----------TKEGLLKIQKGIS 635
           +S V+  +T+    +      +V++I G   +F+ G            K+     Q G  
Sbjct: 30  SSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQV 89

Query: 636 RFTD-EKSYCMPLYCKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVYQSPYMRYGF 692
            F   EK       C  PVIAA+ G A+G G  +AM   C     +E +    P +  G 
Sbjct: 90  TFERVEK-------CSKPVIAAIHGAALGGGLEFAMS--CHMRFATESAKLGLPELTLGL 140

Query: 693 TPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            PG   T    QR     GK  + E++ T++   G E  + G+   V   +  L  +LK+
Sbjct: 141 IPGFAGT----QRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAEETFLDDTLKV 196

Query: 749 AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE 782
           AK+++  S        +    +           E
Sbjct: 197 AKQIAGKSPATARAVLELLQTTKSSHYYEGVQRE 230

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267

 Score = 68.7 bits (169), Expect = 7e-13
 Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 21/179 (11%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACG---------GTKEGLLKIQKGIS 635
           N+ V  G+ DA        + + +++TG  +  F  G                  + G +
Sbjct: 34  NAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFA 93

Query: 636 RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVYQSPYMRYGFT 693
            +              P IAA+ G A+G G   A+    D  +  E + +  P ++ G  
Sbjct: 94  GYVRHF-------IDKPTIAAVNGTALGGGTELALA--SDLVVADERAQFGLPEVKRGLI 144

Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
             AG      ++  + ++  +L T         ++ G+   V+    VL  +L LA  +
Sbjct: 145 AAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAI 203

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265

 Score = 68.3 bits (168), Expect = 9e-13
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 26/182 (14%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACG---------GTKEGLLKIQKGIS 635
           +  +++ + +  + IN     +V+I+TG  E  F  G           ++    +    +
Sbjct: 34  SLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRT 93

Query: 636 RFTD-EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP 694
                E+          PVIAA+ G A+G G  + L CD+ I +E +            P
Sbjct: 94  TMEMVEQ-------LPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIP 146

Query: 695 GAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK 750
           GAG T    QR     G   ++E+++T      +E KE G+   V+P   +   ++++A+
Sbjct: 147 GAGGT----QRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAE 202

Query: 751 KL 752
           K+
Sbjct: 203 KI 204

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 24/212 (11%)

Query: 586 NSTVVKGITDAFSYI-NSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSY 643
           N T+++      +    S+V   V+++ G    F  G   +E    I + + R   + S 
Sbjct: 32  NDTLIEECLQVLNQCETSTV--TVVVLEGLPEVFCFGADFQE----IYQEMKRGRKQASS 85

Query: 644 CMPLY--------CKIPVIAAMQGHAIGAGWAMGLF--CDYTIFSEESVYQSPYMRYGFT 693
             PLY             I+ ++G     G  +G     D  I  + + +    + +G  
Sbjct: 86  QEPLYDLWMKLQTGPYVTISHVRGKVNAGG--LGFVSATDIAIADQTASFSLSELLFGLY 143

Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
           P      +  +R G+  +  +         +E  E G+         VL    K   +L 
Sbjct: 144 PACVLPFL-IRRIGRQKAHYMTLMTKPISVQEASEWGLIDAFDAESDVL--LRKHLLRLR 200

Query: 754 LLSKKELELQKKYYSHSLQKKLSTIFLHELTM 785
            L+KK +   K++   SL  ++S      LT 
Sbjct: 201 RLNKKGIAHYKQFM-SSLDHQVSRAKATALTA 231

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440

 Score = 68.3 bits (167), Expect = 3e-12
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 29/196 (14%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENY---------FACG--------------- 621
           +   V  +  A          +V ++ G             F+ G               
Sbjct: 192 DGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVD 251

Query: 622 ----GTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIF 677
                    + K+ +G+    D   +      + P +AA+ G AIG G  + L  D  + 
Sbjct: 252 FLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLA 311

Query: 678 SEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
           S ++ +  P  + G  PGA   L   +  G  +SR+++        KE + R +   V+ 
Sbjct: 312 SSDAYFSLPAAKEGIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVE 370

Query: 738 RKQVLFYSLKLAKKLS 753
             ++     +   +L 
Sbjct: 371 PDELDAAIERSLTRLD 386

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261

 Score = 66.0 bits (162), Expect = 5e-12
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 27/195 (13%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENY--FACG--------GTKEGLLKIQKGIS 635
           +   +  +  A S +N   + + II+        F+ G        G ++ L        
Sbjct: 29  SKVFIDDLMQALSDLNRP-EIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQ 87

Query: 636 RFTD-EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP 694
                +K          P+I+ ++G   G  + M +  D  I +  S +    +  G   
Sbjct: 88  ITRMIQK-------FPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPY 140

Query: 695 GAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK 750
                           G  + +E++FTAS    +     GI   V+  +++  ++L++A 
Sbjct: 141 NLVGI----HNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAH 196

Query: 751 KLSLLSKKELELQKK 765
            +S  +   + + K+
Sbjct: 197 HISEKAPLAIAVIKE 211

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 33/209 (15%), Positives = 66/209 (31%), Gaps = 18/209 (8%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFA--------CGGTKEGLLKIQKGISR 636
           +   +  +  +   + +   ++ +I+T      F+        CG +        K +  
Sbjct: 29  SLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQE 88

Query: 637 FTDEKSYCMPLY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS--PYMRYGFT 693
                     LY   + +++A+ G     G  + L CDY I ++   Y       + G  
Sbjct: 89  LWLR------LYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGII 142

Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753
                        G   +   L     F   E  + GI   V+P +QV   +L    +  
Sbjct: 143 APFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWM 202

Query: 754 LLSKKELELQKKYYSHSLQKKLSTIFLHE 782
            +     +L K     +   +L T    +
Sbjct: 203 AIPDHARQLTKAMMRKATASRLVTQRDAD 231

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 26/181 (14%), Positives = 66/181 (36%), Gaps = 17/181 (9%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-----TKEGLLKIQKGISRFTDE 640
           +  ++  +  A+    +  +  ++++TG    F  G       ++G +  ++      D+
Sbjct: 36  SPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQ 95

Query: 641 KSYCMPLYCKI-----PVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVYQSPYMRYGFT 693
                           PV+ A+ G   GAG  W      D  I SE++ +  P++  G  
Sbjct: 96  WEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTT--TDIVIASEQATFFDPHVSIGLV 153

Query: 694 PGAGSTLIFPQRFGKILSREILFTASE--FKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
            G    +   +   + ++  +           +   E G+   ++   ++L  + ++A  
Sbjct: 154 AGRE-LVRVSRVLPRSIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADI 212

Query: 752 L 752
           +
Sbjct: 213 V 213

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 36/189 (19%), Positives = 63/189 (33%), Gaps = 37/189 (19%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACG------------GTKEGLLKIQK 632
           +    K    A   I      KV+I+      +F+ G               +  L   +
Sbjct: 33  DLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNE 92

Query: 633 GISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVY--QSPYM 688
            + +                 IA ++GH +G G   A+   CD     +E+      P +
Sbjct: 93  TLDKIAR---------SPQVYIACLEGHTVGGGLEMALA--CDLRFMGDEAGKIGL-PEV 140

Query: 689 RYGFTPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFY 744
             G   G G T    QR     G   + ++  T      +E  E G+   V P+ +    
Sbjct: 141 SLGVLAGTGGT----QRLARLIGYSRALDMNITGETITPQEALEIGLVNRVFPQAETRER 196

Query: 745 SLKLAKKLS 753
           + + A+KL+
Sbjct: 197 TREYARKLA 205

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score = 65.8 bits (160), Expect = 3e-11
 Identities = 30/220 (13%), Positives = 61/220 (27%), Gaps = 24/220 (10%)

Query: 586 NSTVVKGITDAFSYI--NSSVQYKVIIITGYENYFACGG------------TKEGLLKIQ 631
           +  V   + DA   I         V++ +  +  F  G                      
Sbjct: 56  DLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTN 115

Query: 632 KGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE---SVYQSPYM 688
           +  +   D        +  +  +AA+ G   G G+ + L CD     ++   SV      
Sbjct: 116 ETRNGLED-----SSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVP 170

Query: 689 RYGFTPGAGST--LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSL 746
             G  PG G    +   ++     +          +G+  K   +   V+   Q      
Sbjct: 171 LLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQ 230

Query: 747 KLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMH 786
             A +L+  S +    Q    +   +        ++    
Sbjct: 231 ARALELAAQSDRPAHAQGVPLTRIERTDREDGLTYKTLDV 270

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 7/173 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           ++ ++  +        +    +VI++     +F+ G                  ++    
Sbjct: 29  DNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVL 88

Query: 645 MPLY-----CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
             L         P IA +QG A G G  +   CD  I S  + +    ++ G  P   S 
Sbjct: 89  GNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP 148

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
            +  +  G+  ++ +  +A  F         +    +P   +L ++LK A ++
Sbjct: 149 YV-VRAIGERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQI 200

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287

 Score = 63.8 bits (156), Expect = 4e-11
 Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 10/209 (4%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG-TKEGLLKIQKGISRFTDEKSYC 644
           +  ++K +     +   S   KVIII+     F+ G   KE  L  ++G     +    C
Sbjct: 58  SLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKE--LTEEQGRDYHAEVFQTC 115

Query: 645 MPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
             +   I     PVIA + G A  AG  +   CD  + S++S + +P +  G        
Sbjct: 116 SKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGV 175

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
            +  +   + ++ E+LFT      +E    G+   V+P  ++   ++++A+K++ LS+  
Sbjct: 176 AL-ARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPV 234

Query: 760 LELQKKYYSHSLQKKLSTIFLHEL-TMHD 787
           + L K  +   L + L T +      M D
Sbjct: 235 VSLGKATFYKQLPQDLGTAYYLTSQAMVD 263

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272

 Score = 62.9 bits (154), Expect = 6e-11
 Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 30/184 (16%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACG---------GTKEGLLKIQKGIS 635
           +  ++K ++ A   + S  + + III       F  G          + E    + K  +
Sbjct: 37  SKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRA 96

Query: 636 RFTD-EKSYCMPLYCKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVYQSPYMRYGF 692
              D            +P IAA+ G A+G G   A+   CD  + +  +       +   
Sbjct: 97  VINDIAN-------LPVPTIAAIDGLALGGGLELALA--CDIRVAASSAKMGLVETKLAI 147

Query: 693 TPGAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748
            PG G T    QR     G  L++E++F+A    GKE K  G+   VL + Q    + + 
Sbjct: 148 IPGGGGT----QRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRK 203

Query: 749 AKKL 752
           A  L
Sbjct: 204 ALDL 207

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGG-TKEGLLKIQKGISRFTDEKSY 643
              VV+ +      +      +V+I      ++F       +      +         + 
Sbjct: 32  GPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDAS 91

Query: 644 CMPLY-----CKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVY--QSPYMRYGFTP 694
              L+          IA ++G A GAG  + +   CD    S E+    Q P +  G  P
Sbjct: 92  LGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLA--CDMRFASRENAILGQ-PEVGIGAPP 148

Query: 695 GAGSTLIFPQRF----GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK 750
           GAG+     Q      G+  + E + T+S+F     +  G     +P  ++  +   +A 
Sbjct: 149 GAGAI----QHLTRLLGRGRALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAA 204

Query: 751 KLSLLSKKELELQKK 765
           ++S   +  L   K 
Sbjct: 205 RMSGFPRDALIAAKS 219

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267

 Score = 61.4 bits (150), Expect = 2e-10
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 16/162 (9%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGT--KE--GLLKIQKGISRFTDEK 641
           ++ +V  +       +S    +V+++      F C G    E               +  
Sbjct: 36  STALVSQLHQGLRDASSDPAVRVVVLAHTGGTF-CAGADLSEAGSGGSPSSAYDMAVERA 94

Query: 642 SYCMPLY-----CKIPVIAAMQGHAIGAGWAMGL--FCDYTIFSEESVYQSPYMRYGFTP 694
                L       ++PVIAA+ GH    G   GL   CD  +    S +     R G  P
Sbjct: 95  REMAALMRAIVESRLPVIAAIDGHVRAGG--FGLVGACDIAVAGPRSSFALTEARIGVAP 152

Query: 695 GAGSTLIFPQRFGKILSREILFTASEFKGKELKERG-ISMPV 735
              S  + P +     +     T  +F  +  +E G I+M  
Sbjct: 153 AIISLTLLP-KLSARAAARYYLTGEKFDARRAEEIGLITMAA 193

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 34/193 (17%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACG-----------------GTKEGL 627
            +T+++ +    + +      +VI+ +     +F                         +
Sbjct: 33  GATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADV 92

Query: 628 LKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAG--WAMGLFCDYTIFSEESVY-- 683
              Q                      I  + G A G G  +      D    + E+    
Sbjct: 93  NVFQAVGELIRH---------QPQVTIVKLAGKARGGGAEFVAA--ADMAFAAAETAGLG 141

Query: 684 QSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
           Q      G  PG G T     R G+  + E++ TA  F  +     G     LP  ++  
Sbjct: 142 Q-IEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGWINRALPADELDE 200

Query: 744 YSLKLAKKLSLLS 756
           Y  ++A+ ++ L 
Sbjct: 201 YVDRVARNIAALP 213

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.9 bits (152), Expect = 3e-10
 Identities = 61/380 (16%), Positives = 125/380 (32%), Gaps = 125/380 (32%)

Query: 456 NIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNK 515
           N+ +  +   V+   +++  L +++ P   N+   ++H    N    I+       I+ +
Sbjct: 188 NLKNCNSPETVL---EMLQKLLYQIDP---NWTSRSDHS--SNIKLRIH------SIQAE 233

Query: 516 KKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLS-QLLIYAK 574
            +R+     +     N  +VL   ++N +  + F               NLS ++L+   
Sbjct: 234 LRRLLKSKPY----ENCLLVL-LNVQNAKAWNAF---------------NLSCKILL--- 270

Query: 575 LICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI 634
                 ++        K +TD  S    +     I +  +        T + +  +   +
Sbjct: 271 -----TTRF-------KQVTDFLS----AATTTHISLDHHSMTL----TPDEVKSL---L 307

Query: 635 SRFTDEKSYCMP-LYCKI-P----VIAAM--QGHAIGAGWAMGLFCD-YTIFSEESV-YQ 684
            ++ D +   +P       P    +IA     G A    W   + CD  T   E S+   
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH-VNCDKLTTIIESSLNVL 366

Query: 685 SPY-MRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
            P   R  F   +    +FP                           I   +L    +++
Sbjct: 367 EPAEYRKMFDRLS----VFP--------------------PSAH---IPTILL---SLIW 396

Query: 744 YSL----------KLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHD-----Y 788
           + +          KL K  SL+ K+  E        S+  +L     +E  +H      Y
Sbjct: 397 FDVIKSDVMVVVNKLHKY-SLVEKQPKES--TISIPSIYLELKVKLENEYALHRSIVDHY 453

Query: 789 ----TFVNNPSVITNIERYF 804
               TF ++  +   +++YF
Sbjct: 454 NIPKTFDSDDLIPPYLDQYF 473

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 2e-09
 Identities = 101/624 (16%), Positives = 173/624 (27%), Gaps = 171/624 (27%)

Query: 62  DFDKS---INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIA 118
           DF+         DI   +       +++    D     KS    ++ ++ D  I + D  
Sbjct: 8   DFETGEHQYQYKDI---LSVFEDAFVDNFDCKDVQDMPKS---ILSKEEIDHIIMSKDAV 61

Query: 119 -----IIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICK 173
                +        +   V+KF   +L          + ++++       +     T   
Sbjct: 62  SGTLRLFWTLLSKQE-EMVQKFVEEVLR--------INYKFLMSPIKTEQRQPSMMTR-- 110

Query: 174 KMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLF--LQNCWTCIEDAGYNPFSLSGSL-CG 230
                  IE  D L+ N +   A+Y   + + +  L+     +  A      + G L  G
Sbjct: 111 -----MYIEQRDRLY-NDNQVFAKYNVSRLQPYLKLRQALLELRPAKN--VLIDGVLGSG 162

Query: 231 --VFVGCAVSDYNKLITDP-KMYNAYALMGESVSILPARVSYFLNLQGPCLAID---TAC 284
                      Y        K++  +  +    S      +    LQ     ID   T+ 
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIF--WLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSR 216

Query: 285 SSSLVAIAHACDS------------------LILGNSKIALAGGVY---IINTPDIHIKM 323
           S     I     S                  L+L N        V      N  ++  K+
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--------VQNAKAWNAFNLSCKI 268

Query: 324 -------SKSGMLSPDGHCY-SFDQRANGFVPGEGVGVLML------KKLKDAKKDGD-- 367
                    +  LS     + S D  +    P E   +L+       + L       +  
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 368 ----------DIYCIIKGWG-VNQDGKTNGITAPNTKSQIRLQT-----KIYKKFNINPN 411
                     D       W  VN D  T  I     +S + +       K++ + ++ P 
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKLTTII-----ESSLNVLEPAEYRKMFDRLSVFPP 383

Query: 412 DI----QLLEAHGTGTKL-GDPIEFEALCESF-NKFSYHKNFCALGSVKSNIGHSATAAG 465
                  LL        +  D I+ +       NK   HK        K           
Sbjct: 384 SAHIPTILLS------LIWFDVIKSD--VMVVVNKL--HKYSLVEKQPKE---------S 424

Query: 466 VIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF 525
            I +  I L LK K+       N    H  + +  + I     S D+          +  
Sbjct: 425 TISIPSIYLELKVKLE------NEYALHRSIVDH-YNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 526 GFSGTNAHIVLMEKIKNNENIDKF-------------INNLPIFMVFPLSAKN-LSQLLI 571
           G      H   ++ I++ E +  F             I +         S  N L QL  
Sbjct: 478 GH-----H---LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529

Query: 572 YAKLICNYISKDLKNSTVVKGITD 595
           Y   IC+    D K   +V  I D
Sbjct: 530 YKPYICD---NDPKYERLVNAILD 550

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725

 Score = 50.0 bits (120), Expect = 3e-06
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 22/181 (12%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           +  V+  +   +    S    K I+ITG +  F+ G    G  ++QKG  +        +
Sbjct: 32  SFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISI 91

Query: 646 PLY------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
            +        + P +AA+ G A+G G  + + C   I +  +    P ++ G  PG G T
Sbjct: 92  DIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGT 151

Query: 700 LIFPQRFGKILSR--------EILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK 751
               QR    L R        E++ T+   K +E    G+   V+P  +++  + + A  
Sbjct: 152 ----QR----LPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALD 203

Query: 752 L 752
           +
Sbjct: 204 I 204

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742

 Score = 48.0 bits (115), Expect = 1e-05
 Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 37/163 (22%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG---------TKEGLLKIQKGISR 636
           + TV++ + +      S    K I+I G    F  G              L  +   I R
Sbjct: 45  SPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDEIQR 104

Query: 637 FTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
                        + PV+AA+QG A+G G  + L C Y I + ++    P +  G  PGA
Sbjct: 105 ------------YQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGA 152

Query: 697 GSTLIFPQRFGKILSR--------EILFTASEFKGKELKERGI 731
             T    Q     L R        +++ +       E    GI
Sbjct: 153 RGT----QL----LPRVVGVPVALDLITSGKYLSADEALRLGI 187

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715

 Score = 47.6 bits (114), Expect = 2e-05
 Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 24/182 (13%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG---------------TKEGLLKI 630
           N   +  +  A   I +    K +I++  ++ F  G                   G L+ 
Sbjct: 33  NRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEA 92

Query: 631 QKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY 690
            K  S F D           +P +AA+ G A+G G  M L  D+ + ++ +    P ++ 
Sbjct: 93  NKIFSDFED---------LNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKL 143

Query: 691 GFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK 750
           G  PG G T+  P+  G   + E + +  E + ++  +      V+   ++   +L L K
Sbjct: 144 GIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIK 203

Query: 751 KL 752
           + 
Sbjct: 204 RA 205

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	829
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	100.0
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	100.0
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	100.0
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	100.0
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	100.0
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	100.0
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	100.0
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	100.0
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	100.0
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	100.0
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	100.0
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	100.0
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	100.0
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	100.0
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	100.0
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	100.0
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	100.0
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	100.0
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	100.0
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	100.0
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	100.0
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	100.0
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	100.0
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	100.0
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	100.0
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	100.0
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	100.0
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	100.0
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	100.0
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	100.0
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	100.0
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	100.0
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	100.0
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	100.0
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	100.0
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	100.0
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	100.0
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	100.0
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	100.0
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	100.0
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	100.0
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	100.0
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	100.0
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	100.0
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	100.0
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	100.0
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	100.0
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	100.0
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	100.0
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	100.0
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	100.0
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	100.0
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	100.0
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	100.0
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	100.0
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	100.0
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	100.0
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	100.0
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	100.0
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	100.0
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	100.0
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	100.0
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	100.0
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	100.0
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	100.0
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	100.0
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	100.0
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	100.0
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	100.0
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	100.0
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	100.0
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	100.0
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	100.0
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	100.0
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	100.0
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	100.0
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	100.0
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	100.0
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	100.0
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	100.0
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	100.0
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	100.0
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	100.0
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	100.0
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	100.0
3t3w_A	279	Enoyl-COA hydratase; ssgcid, structural genomics,	100.0
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	100.0
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	100.0
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	100.0
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	100.0
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	99.98
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.97
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.97
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.97
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.97
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.97
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.97
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.97
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.97
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.97
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.97
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.97
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	99.96
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.96
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.95
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.95
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.95
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.94
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.94
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.93
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.92
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.92
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.91
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.86
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.86
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.85
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.85
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.78
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.73
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.73
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	99.71
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.71
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.71
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.71
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	99.68
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	99.67
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.66
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.66
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	99.65
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.64
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.64
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.64
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	99.63
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	99.62
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.61
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	99.57
3rst_A	240	Signal peptide peptidase SPPA; alpha/beta protein	99.55
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	99.54
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	99.53
3viv_A	230	441AA long hypothetical NFED protein; protein-pept	99.5
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	99.49
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	99.44
3v7i_A	413	Putative polyketide synthase; type III polyketide	99.43
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	99.42
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	99.38
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	99.33
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	99.31
1y7o_A	218	ATP-dependent CLP protease proteolytic subunit; hy	99.23
2f9y_B	304	Acetyl-coenzyme A carboxylase carboxyl transferas	99.19
2f9y_A	339	Acetyl-COA carboxylase, carboxyltransferase alpha;	99.04
2f9i_A	327	Acetyl-coenzyme A carboxylase carboxyl transferase	99.04
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.93
2cg5_B	91	Fatty acid synthase; transferase-hydrolase complex	98.87
2ju1_A	95	Erythronolide synthase; carrier protein domain, mo	98.7
2cby_A	208	ATP-dependent CLP protease proteolytic subunit 1;	98.42
2afd_A	88	Protein ASL1650; twisted antiparallel helical bund	98.27
2kr5_A	89	PKS, aflatoxin biosynthesis polyketide synthase; a	98.17
3tzy_A	491	Polyketide synthase PKS13; acyltransferase, long f	98.05
2liu_A	99	CURA; holo state, transferase; NMR {Lyngbya majusc	98.05
4i4d_A	93	Peptide synthetase NRPS type II-PCP; structural ge	98.01
2ava_A	82	ACP I, acyl carrier protein I, chloroplast; four-h	97.91
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	97.89
1dny_A	91	Non-ribosomal peptide synthetase peptidyl carrier	97.81
1l0i_A	78	Acyl carrier protein; acyl chain binding, fatty ac	97.81
2f6i_A	215	ATP-dependent CLP protease, putative; structural g	97.74
2ehs_A	77	ACP, acyl carrier protein; lipid transport, struct	97.74
2cnr_A	82	FAS, ACP, acyl carrier protein; polykdetide, phosp	97.72
3qwd_A	203	ATP-dependent CLP protease proteolytic subunit; ca	97.7
1or5_A	83	Acyl carrier protein; ACP, biosynthesis, frenolici	97.68
2lol_A	81	ACP, acyl carrier protein; lipid transport; NMR {R	97.67
2dnw_A	99	Acyl carrier protein; ACP, fatty acid biosynthesis	97.67
1x3o_A	80	Acyl carrier protein; structural genomics, riken s	97.66
1yg6_A	193	ATP-dependent CLP protease proteolytic subunit; en	97.63
1nq4_A	95	Oxytetracycline polyketide synthase acyl carrier p	97.6
2l22_A	212	Mupirocin didomain acyl carrier protein; biosynthe	97.56
1af8_A	86	Actinorhodin polyketide synthase acyl carrier Pro;	97.54
1f80_D	81	Acyl carrier protein; transferase; HET: PN2; 2.30A	97.51
1klp_A	115	ACP, ACPM, meromycolate extension acyl carrier pro	97.48
1vku_A	100	Acyl carrier protein; TM0175, structural genomics,	97.47
3p2l_A	201	ATP-dependent CLP protease proteolytic subunit; st	97.46
2kwl_A	84	ACP, acyl carrier protein; structural genomics, se	97.46
3gzm_A	81	Acyl carrier protein; helix bundle, phosphopanteth	97.41
2l3v_A	79	ACP, acyl carrier protein; structural genomi seatt	97.41
2qnw_A	82	Acyl carrier protein; malaria, SGC, structural gen	97.41
1tg6_A	277	Putative ATP-dependent CLP protease proteolytic S;	97.38
3ejb_A	97	Acyl carrier protein; protein-protein complex, cyt	97.37
2kw2_A	101	Specialized acyl carrier protein; structural genom	97.29
2lte_A	103	Specialized acyl carrier protein; APO protein, tra	96.35
4dxe_H	101	ACP, acyl carrier protein; acyl-carrier-protein sy	97.21
2l4b_A	88	Acyl carrier protein; infectious disease, human gr	97.08
2kjs_A	87	Putative acyl carrier protein; alpha, ACP, PNS, st	97.07
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	97.01
2l9f_A	102	CALE8, meacp; transferase, acyl carrier protein; N	96.93
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	96.93
4gm2_A	205	ATP-dependent CLP protease proteolytic subunit; st	96.91
3tej_A	329	Enterobactin synthase component F; nonribosomal pe	96.79
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	96.76
2jq4_A	105	AGR_C_4658P, hypothetical protein ATU2571; ATC2521	96.69
3ce7_A	107	Specific mitochodrial acyl carrier protein; malari	96.51
1fh1_A	92	NODF, nodulation protein F; ROOT nodulation factor	96.38
2f9i_B	285	Acetyl-coenzyme A carboxylase carboxyl transferase	96.19
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	96.03
3iav_A	530	Propionyl-COA carboxylase complex B subunit; accas	95.94
1dv5_A	80	APO-DCP, APO-D-alanyl carrier protein; 3-helix bun	95.74
2cgq_A	113	Acyl carrier protein ACPA; RV0033, protein transpo	95.56
2cq8_A	110	10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH	95.52
2amw_A	83	Hypothetical protein NE2163; all helical protein,	95.5
2kci_A	87	Putative acyl carrier protein; alpha, ACP, PCP, st	95.44
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.05
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	94.96
2fq1_A	287	Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy	94.95
3u9r_B	555	MCC beta, methylcrotonyl-COA carboxylase, beta-sub	94.94
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	94.4
2vsq_A	1304	Surfactin synthetase subunit 3; ligase, peptidyl c	94.19
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	94.18
2lki_A	105	Putative uncharacterized protein; helical bundle,	94.05
2jgp_A	520	Tyrocidine synthetase 3; multifunctional enzyme, a	93.65
4f6l_B	508	AUSA reductase domain protein; thioester reductase	93.25
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	93.09
3rg2_A	617	Enterobactin synthase component E (ENTE), 2,3-DIH	93.0
4dg8_A	620	PA1221; ANL superfamily, adenylation domain, pepti	92.98
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	92.36
3k8x_A	758	Acetyl-COA carboxylase; transferase, carboxyltrans	92.1
3gf3_A	588	Glutaconyl-COA decarboxylase subunit A; sodium ION	90.88
2x24_A	793	Acetyl-COA carboxylase; fatty acid biosynthesis, l	88.46
2px6_A	316	Thioesterase domain; thioesaterse domain, orlistat	88.38
4amm_A	401	DYNE8; transferase; 1.40A {Micromonospora chersina	87.73
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	86.57
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	85.81
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	84.39
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	81.92
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	80.84

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=100.00  E-value=4.4e-84  Score=789.10  Aligned_cols=494  Identities=33%  Similarity=0.587  Sum_probs=451.5

Q ss_pred             CCCCEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCC-CcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        113 NNDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      ..++||||||||++|+| .++++||++|.+|+++++++|..| |+.+.+|++++...++.+++.++++++++.||+.||+
T Consensus         4 ~~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~   83 (915)
T 2qo3_A            4 ESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFG   83 (915)
T ss_dssp             CCCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHT
T ss_pred             CCCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcC
Confidence            45789999999999998 899999999999999999999999 9999999999999999999999999999999999999


Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      |+|++++.|||+++|+++++++||+|||++++++++.++|||+|++..+|.........+.++..++...+.++++|++.
T Consensus        84 i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~  163 (915)
T 2qo3_A           84 VSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYT  163 (915)
T ss_dssp             CCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHH
T ss_pred             CCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888765555667788888888999999999999


Q ss_pred             ccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccc
Q psy11396        271 LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEG  350 (829)
Q Consensus       271 lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEG  350 (829)
                      ||++||+++|+++|+||++||++|+++|++|+||++||||+|.++.|..+..|...+++++++.|+|||.+++|+++|||
T Consensus       164 lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEG  243 (915)
T 2qo3_A          164 MGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEG  243 (915)
T ss_dssp             HTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCE
T ss_pred             hCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396        351 VGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE  430 (829)
Q Consensus       351 aaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E  430 (829)
                      ++++||+++++|+++|++||++|+|++.++||.+.+.+.|++.++.++|++||++||++|+||||||+|||||++||++|
T Consensus       244 agavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E  323 (915)
T 2qo3_A          244 VTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIE  323 (915)
T ss_dssp             EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHH
T ss_pred             eEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHH
Confidence            99999999999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396        431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW  510 (829)
Q Consensus       431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~  510 (829)
                      ..+|.++|+.......+++++++|+++||++||||++++++++++|+++.|||++|+++|||+++|+..+++++++.++|
T Consensus       324 ~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w  403 (915)
T 2qo3_A          324 ANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPW  403 (915)
T ss_dssp             HHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEEC
T ss_pred             HHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCccc
Confidence            99999999865444567999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCcccccc
Q psy11396        511 DIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVV  590 (829)
Q Consensus       511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~  590 (829)
                      + ....+|+++||||||||+|+|+||++++......  .......++++++||+++++|+++++++.+|+. ++.  .-+
T Consensus       404 ~-~~~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~~--~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~-~~~--~~l  477 (915)
T 2qo3_A          404 R-RGERTRRAAVSAFGISGTNAHVIVEEAPEREHRE--TTAHDGRPVPLVVSARSTAALRAQAAQIAELLE-RPD--ADL  477 (915)
T ss_dssp             C-SSSSCCEEEEEEECTTSEEEEEEEEECCC----------CCSSCEEEEEEESSHHHHHHHHHHHHHHTT-SSS--CCH
T ss_pred             c-cCCCCcEEEEeeecCCCceEEEEEeecccccccc--ccccCCcccceeEecCCHHHHHHHHHHHHHHhc-CCc--cch
Confidence            5 3456899999999999999999999997532211  111122357899999999999999999999998 432  236


Q ss_pred             cccccchhhhcccccceeeeee
Q psy11396        591 KGITDAFSYINSSVQYKVIIIT  612 (829)
Q Consensus       591 ~eL~~~l~~~~~d~~vr~vVl~  612 (829)
                      .++.+++..-+.+-..|..++.
T Consensus       478 ~d~~~tl~~~r~~~~~r~~~~~  499 (915)
T 2qo3_A          478 AGVGLGLATTRARHEHRAAVVA  499 (915)
T ss_dssp             HHHHHHHHHSSCCCSEEEEEEE
T ss_pred             hHHHHHHhhcccccCceEEEEE
Confidence            7888888777777777777765

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=100.00  E-value=1.4e-81  Score=767.33  Aligned_cols=481  Identities=34%  Similarity=0.594  Sum_probs=431.2

Q ss_pred             CCCEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCC-CcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396        114 NDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI  191 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i  191 (829)
                      .++||||||||++|++ .++++||++|.+|+++++++|.+| |+      +++      .++.++++++++.||+.||+|
T Consensus        38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~------~~~------~~~~~~~l~~~~~fD~~~f~i  105 (917)
T 2hg4_A           38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWE------PDP------DARLGGMLAAAGDFDAGFFGI  105 (917)
T ss_dssp             HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCC------CCS------SCCEEBCCTTTTEECTGGGTC
T ss_pred             CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccC------CCC------CcceeeEecCccccChhhcCC
Confidence            4789999999999986 789999999999999999999888 62      221      156789999999999999999


Q ss_pred             CHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhh
Q psy11396        192 SPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       192 ~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +|++++.|||+++|+++++++||+|||++++++++.++|||+|++..+|.... ..+..+.++..++...+.++++|++.
T Consensus       106 ~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~  185 (917)
T 2hg4_A          106 SPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYC  185 (917)
T ss_dssp             CHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHH
T ss_pred             CHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988886543 34566778888888889999999999


Q ss_pred             ccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccc
Q psy11396        271 LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEG  350 (829)
Q Consensus       271 lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEG  350 (829)
                      ||++||+++|+++|+||++||++|+++|++|+||++||||+|.++.+.....|...+++++++.|+|||.+++|+++|||
T Consensus       186 lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEG  265 (917)
T 2hg4_A          186 LGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEG  265 (917)
T ss_dssp             HTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCE
T ss_pred             cCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcce
Confidence            99999999999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             eEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396        351 VGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE  430 (829)
Q Consensus       351 aaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E  430 (829)
                      ++++||+++++|+++|++||++|+|++.++||.+.+.+.|+..++.++|++||++||++|+||||||+|||||++||++|
T Consensus       266 agavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E  345 (917)
T 2hg4_A          266 AGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIE  345 (917)
T ss_dssp             EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHH
T ss_pred             EEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHH
Confidence            99999999999999999999999999999999998999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396        431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW  510 (829)
Q Consensus       431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~  510 (829)
                      .++|.++|+.......+++|+++|+++||+++|+|++++++++++|+|++|||++||++|||+++++..+++++++.++|
T Consensus       346 ~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w  425 (917)
T 2hg4_A          346 VHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSW  425 (917)
T ss_dssp             HHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEEC
T ss_pred             HHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccC
Confidence            99999999865444567999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCcccccc
Q psy11396        511 DIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVV  590 (829)
Q Consensus       511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~  590 (829)
                      +. ...+|+++||||||||+|+|+||++++......   +.....++++++||+++++|+++++++.+|+..++..  -+
T Consensus       426 ~~-~~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~~---~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~~~~~~--~l  499 (917)
T 2hg4_A          426 PA-GERPRRAGVSSFGISGTNAHVIVEEAPEADEPE---PAPDSGPVPLVLSGRDEQAMRAQAGRLADHLAREPRN--SL  499 (917)
T ss_dssp             CC-CSSCCEEEEEEECTTSEEEEEEEEECCCCC-----------CCEEEEEEESSHHHHHHHHHHHHHHHHHCTTS--CH
T ss_pred             CC-CCCCCEEEEeeecCCCceEEEEeccCCcccCCC---CccccCcceeeeccCCHHHHHHHHHHHHHHHhcCCcc--cH
Confidence            63 456899999999999999999999997542111   1112346899999999999999999999999987542  25


Q ss_pred             cccccchhhhcccccceeeeee
Q psy11396        591 KGITDAFSYINSSVQYKVIIIT  612 (829)
Q Consensus       591 ~eL~~~l~~~~~d~~vr~vVl~  612 (829)
                      .++.+++..-+.+-..|++++.
T Consensus       500 ~d~~~tl~~~r~~~~~r~~~~~  521 (917)
T 2hg4_A          500 RDTGFTLATRRSAWEHRAVVVG  521 (917)
T ss_dssp             HHHHHHHHHSSCCCSEEEEEEE
T ss_pred             HHHHHHHHhchhcccceEEEEe
Confidence            6777777766666666766654

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=100.00  E-value=2.7e-80  Score=758.46  Aligned_cols=445  Identities=31%  Similarity=0.577  Sum_probs=405.7

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++||||||||++|++.++++||++|.+|++++++.+ .||+...|+.          ....|++++++.||+.||+|+|
T Consensus         3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~-~~~~~~~~~~----------~~~~g~~~~~~~FD~~~f~i~~   71 (965)
T 3hhd_A            3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDD-RRWKAGLYGL----------PRRSGKLKDLSRFDASFFGVHP   71 (965)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSS-SSSCTTGGGC----------CSCEECCSCSSCCCTTTTTCCH
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCC-cccccccccC----------cccccccCChhhcChhhcCCCH
Confidence            5799999999999999999999999999999999975 6887543321          1235678899999999999999


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhhcc
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYFLN  272 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lg  272 (829)
                      +|++.|||+|||+++++|+||+|||++++++++.++|||+|++.++|.... .++..+.++..++...++++++|++.||
T Consensus        72 ~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lg  151 (965)
T 3hhd_A           72 KQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFD  151 (965)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999988886543 4567788889999999999999999999


Q ss_pred             CCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceE
Q psy11396        273 LQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG  352 (829)
Q Consensus       273 l~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaa  352 (829)
                      ++||+++|+++|+||++||++|+++|++|+||++||||+|.+++|.....|+..+++++++.|+|||.+++|+++|||++
T Consensus       152 l~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGag  231 (965)
T 3hhd_A          152 FRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVV  231 (965)
T ss_dssp             CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEE
T ss_pred             CCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeecCCCC-CCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHH
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKT-NGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEF  431 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~  431 (829)
                      ++||+++++|+    +||++|+|++.++||.+ .+++.|+..++.++|++||++||++|+||||||+|||||++||++|.
T Consensus       232 avvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~  307 (965)
T 3hhd_A          232 AVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQEL  307 (965)
T ss_dssp             EEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHH
T ss_pred             EEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHH
Confidence            99999999985    49999999999999976 67899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCCCCeeeccccccc
Q psy11396        432 EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LENSPFFINTKCKSW  510 (829)
Q Consensus       432 ~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~~~~~v~~~~~~~  510 (829)
                      +||.++|+..  +..+++|+|+|+++||++||||+++++|++++|+|++|||++||++|||+++ +...++.++++.++|
T Consensus       308 ~Al~~~f~~~--~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~  385 (965)
T 3hhd_A          308 NGITRALCAT--RQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPV  385 (965)
T ss_dssp             HHHHHHHCSS--CSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEEC
T ss_pred             HHHHHHhccc--CCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccC
Confidence            9999999853  3457999999999999999999999999999999999999999999999998 678899999999999


Q ss_pred             cccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccC
Q psy11396        511 DIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKD  583 (829)
Q Consensus       511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n  583 (829)
                      +.     ++++||||||||+|+|+||++++.......   .....+++|++||+++++|+++++++.+++...
T Consensus       386 ~~-----~~a~v~sfG~gG~Nah~il~~~~~~~~~~~---~~~~~~~~~~~Sa~~~~~l~~~~~~~~~~~~~~  450 (965)
T 3hhd_A          386 RG-----GNVGINSFGFGGSNVHIILRPNTQPPPAPA---PHATLPRLLRASGRTPEAVQKLLEQGLRHSQDL  450 (965)
T ss_dssp             CS-----CEEEEEEECTTSEEEEEEEEECCCCCCCCC---GGGGSCEEEEEEESSHHHHHHHHHHHHHTTTCH
T ss_pred             CC-----CeEEEecccCCCceEEEEeccCCccccccc---ccccccceeecccCCHHHHHHHHHHHHhhhccc
Confidence            52     479999999999999999999976432211   112347899999999999999999998887643

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=2.3e-78  Score=801.63  Aligned_cols=442  Identities=33%  Similarity=0.592  Sum_probs=405.5

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++||||||||++|++.++++||++|.+|++++++.+ .||+...++.          ....|++++++.||+.||+|+|+
T Consensus         2 ~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~~----------~~~~g~~~~~~~fd~~~f~i~~~   70 (2512)
T 2vz8_A            2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADD-RRWKAGLYGL----------PRRMGKLKDLSRFDASFFGVHSK   70 (2512)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECS-SSSCTTGGGC----------CSEEECCSCSSCCCTTTTTCCHH
T ss_pred             CCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCC-cccccccccC----------cccceecCCcccCCHhhcCCCHH
Confidence            689999999999999999999999999999999954 7897653221          23467888999999999999999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      |++.||||||++++++|+||+|||+++..+++.++|||+|++..+|.... .++..+.++..+++..+++++|||+.|||
T Consensus        71 ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l  150 (2512)
T 2vz8_A           71 QANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF  150 (2512)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999886554 45667888999999999999999999999


Q ss_pred             CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396        274 QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV  353 (829)
Q Consensus       274 ~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa  353 (829)
                      +||+++|+++||||++||++||++|++|+||++||||++.+++|..+..|+++++++++++|+|||.+++||++|||+|+
T Consensus       151 ~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~  230 (2512)
T 2vz8_A          151 KGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVA  230 (2512)
T ss_dssp             CSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEE
T ss_pred             CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGK-TNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE  432 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~-~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~  432 (829)
                      +|||++++|+    +|||+|+|+++|+||. ..+++.|++.+|.++|++||++||++|+||+|||+|||||++||++|++
T Consensus       231 ~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~  306 (2512)
T 2vz8_A          231 VLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELN  306 (2512)
T ss_dssp             EEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHH
T ss_pred             EEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHH
Confidence            9999999996    5999999999999996 4689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCCCCeeecccccccc
Q psy11396        433 ALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LENSPFFINTKCKSWD  511 (829)
Q Consensus       433 Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~~~~~v~~~~~~~~  511 (829)
                      ||.++|+...  ..+++|||+|+|+||++||||++++||++++|+||+|||++||++|||+++ |+..++.++++.++|+
T Consensus       307 al~~~f~~~~--~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  384 (2512)
T 2vz8_A          307 GIVNALCATR--REPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIR  384 (2512)
T ss_dssp             HHHHHHCSCS--SSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCC
T ss_pred             HHHHHhcccC--CCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCC
Confidence            9999998532  357999999999999999999999999999999999999999999999997 8889999999999995


Q ss_pred             ccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcc
Q psy11396        512 IKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYIS  581 (829)
Q Consensus       512 ~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~  581 (829)
                      .     ++++||||||||+|+|+|||+++.......   .....++++++||+++++|+++++++.+++.
T Consensus       385 ~-----~~a~vnsfG~gG~Nah~il~~~~~~~~~~~---~~~~~~~~~~~sa~~~~~l~~~~~~~~~~~~  446 (2512)
T 2vz8_A          385 G-----GNVGINSFGFGGSNVHVILQPNSRPAPPPA---QHAALPRLLQASGRTLEAVQTLLEQGLRHSR  446 (2512)
T ss_dssp             S-----CCEEEEEEETTTEEEEEEEEECCCCCCCCS---STTTCCEEEEEEESSHHHHHHHHHHHHTTTT
T ss_pred             C-----CeEEEeccCCCCceeEEEEccCCccccccc---cccccceeeeecCCCHHHHHHHHHHHHhhhc
Confidence            2     479999999999999999999975332211   1224578999999999999999999988764

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=100.00  E-value=6.5e-72  Score=633.14  Aligned_cols=401  Identities=25%  Similarity=0.403  Sum_probs=361.3

Q ss_pred             CCCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        111 SINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       111 ~~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      ....++||||||||++|+|.+.++||++|.+|++++++++  ||+...++           .+.+++++   .||+.+| 
T Consensus        14 ~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~-----------~~~~~~v~---~fd~~~~-   76 (427)
T 3ho9_A           14 CVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSAYA-----------TKFAGLVK---DFNCEDI-   76 (427)
T ss_dssp             ---CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTCS-----------CCEEECCS---SCCCTTT-
T ss_pred             CCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCC--ccccccCc-----------cceeeEcC---CCChhhc-
Confidence            3456899999999999999999999999999999999986  56544332           33445554   4999999 


Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccc
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSI  262 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  262 (829)
                      |++++++.|||+++|+++++++||+|||+++++++..++|||+|++.+++....        ..+..+.++.+++...+.
T Consensus        77 i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (427)
T 3ho9_A           77 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNM  156 (427)
T ss_dssp             SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTH
T ss_pred             CCHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchH
Confidence            999999999999999999999999999999999999999999999876543221        245667888888999999


Q ss_pred             hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCC
Q psy11396        263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYS  337 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~p  337 (829)
                      ++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.++.|..+..|...++++.     ++.|+|
T Consensus       157 ~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~p  236 (427)
T 3ho9_A          157 VAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRP  236 (427)
T ss_dssp             HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCT
T ss_pred             HHHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999984     357999


Q ss_pred             CCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        338 FDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       338 fd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                      ||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.+++++||++||++|+||||||
T Consensus       237 fd~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  316 (427)
T 3ho9_A          237 WDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVN  316 (427)
T ss_dssp             TBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ccCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEE
Confidence            99999999999999999999999999999999999999999999988666667889999999999999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396        418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE  497 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~  497 (829)
                      +|||||+.+|++|..++.++|+..   ..++++++.|+++||++||||++++++++++|++++|||++|+++|||.++++
T Consensus       317 ~HgtgT~~~d~~e~~a~~~~~g~~---~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~  393 (427)
T 3ho9_A          317 AHGTSTPAGDKAEAQAVKTIFGEA---ASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLD  393 (427)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHGGG---GGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCB
T ss_pred             ecCCcCCCcCHHHHHHHHHHhccc---CCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc
Confidence            999999999999999999999852   34589999999999999999999999999999999999999999999999876


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                          +++.+.++|+    .++++++|||||||+|+|+||+++
T Consensus       394 ----~~~~~~~~~~----~~~~a~~~sfGfgG~na~~vl~~~  427 (427)
T 3ho9_A          394 ----FVPHEARQVS----GMEYTLCNSFGFGGTNGSLIFKKI  427 (427)
T ss_dssp             ----CCBSSCEECS----SCCEEEEEEEETTTEEEEEEEECC
T ss_pred             ----ccccccccCC----CCCEEEEeCccCCceeEEEEEEeC
Confidence                4566777773    478999999999999999999974

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=100.00  E-value=7.1e-72  Score=634.04  Aligned_cols=403  Identities=24%  Similarity=0.392  Sum_probs=362.1

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCc---ccccCCcCCC
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLED---IEIFDPLFFN  190 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~fd~~~f~  190 (829)
                      .++||||||||++|+|.+.++||++|.+|+++++++|  +|+...+           +.+.++++++   ++.||+.+| 
T Consensus        20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~fd~~~~-   85 (438)
T 2iwz_A           20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLV--GEEYKSI-----------PCSVAAYVPRGSDEGQFNEQNF-   85 (438)
T ss_dssp             ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--SGGGTTS-----------SCCEEECCCBSSSTTSBCGGGT-
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCC--chhcccC-----------ccceeeeeccccccccCChhhc-
Confidence            3689999999999999999999999999999999987  4543222           2345666665   566999998 


Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCC-CCCCCCceEEEEcccccccccc--------ccCccccchhhhcccccc
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP-FSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVS  261 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~-~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  261 (829)
                      +++++++.|||+++|+++++++||+|||+++ +++++.++|||+|+..+++..+        ...+..++|+.+++..++
T Consensus        86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  165 (438)
T 2iwz_A           86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVN  165 (438)
T ss_dssp             SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTT
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhh
Confidence            9999999999999999999999999999998 7888889999999887765322        123456778888888889


Q ss_pred             chhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC----CCCCCC
Q psy11396        262 ILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP----DGHCYS  337 (829)
Q Consensus       262 ~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~----~~~~~p  337 (829)
                      .++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+.+|..+..|..++++++    ++.|+|
T Consensus       166 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~p  245 (438)
T 2iwz_A          166 MAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRP  245 (438)
T ss_dssp             HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCT
T ss_pred             HHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCccccc
Confidence            9999999999999999999999999999999999999999999999999999888988889999999986    789999


Q ss_pred             CCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        338 FDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       338 fd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                      ||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.|+..++.++|++||+++|++|+||||||
T Consensus       246 fd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve  325 (438)
T 2iwz_A          246 FHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN  325 (438)
T ss_dssp             TCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             CCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence            99999999999999999999999999999999999999999999987555555788999999999999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396        418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE  497 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~  497 (829)
                      +|||||+.+|++|.++|.++|+..   ..+++|++.|+++||++||||++++++++++|+++.|||++|+++|||.++++
T Consensus       326 ~HgtgT~~gD~~E~~al~~~fg~~---~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~  402 (438)
T 2iwz_A          326 AHATSTPLGDAAENKAIKHLFKDH---AYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLN  402 (438)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHGGG---GGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSB
T ss_pred             ecCCCCcccCHHHHHHHHHHHhcc---CCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc
Confidence            999999999999999999999753   23589999999999999999999999999999999999999999999999876


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                          +++.+.++|+  ...++++++|||||||+|+|+||+.+
T Consensus       403 ----~v~~~~~~~~--~~~~~~a~~~sfGfGG~na~~vl~~~  438 (438)
T 2iwz_A          403 ----YVPLKAQEWK--TEKRFIGLTNSFGFGGTNATLCIAGL  438 (438)
T ss_dssp             ----CCBSSCEECC--CSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred             ----ccCCCcccCC--CCCccEEEEecCcCCCeeEEEEEeeC
Confidence                4667888995  24589999999999999999999863

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=4.2e-71  Score=624.81  Aligned_cols=397  Identities=25%  Similarity=0.383  Sum_probs=356.9

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++|+|||||+++|+|.+.++||++|.+|++++++++  ||+...+           ..+.+++++   .||+.+ .+++
T Consensus         6 m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~i~---~fd~~~-~~~~   68 (416)
T 1e5m_A            6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT--RFDASDQ-----------ACRFGGEVK---DFDATQ-FLDR   68 (416)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTS-----------SCCEEECCC---SCCGGG-TSCH
T ss_pred             CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCC--ccccccC-----------ccceeEEeC---CCCccc-cCCH
Confidence            4689999999999999999999999999999999986  5654332           233445554   488887 4999


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhh
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPA  265 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~  265 (829)
                      ++++.|||+++|+++++++||+|||++++++++.++|||+|++.+++...        ...+..++|+.+++...+.+++
T Consensus        69 ~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  148 (416)
T 1e5m_A           69 KEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASG  148 (416)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHH
Confidence            99999999999999999999999999999999999999999987764321        1244567788888888899999


Q ss_pred             HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCCC
Q psy11396        266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQ  340 (829)
Q Consensus       266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd~  340 (829)
                      +|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+.++..+..|..+++++     |++.|+|||.
T Consensus       149 ~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~  228 (416)
T 1e5m_A          149 LTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDK  228 (416)
T ss_dssp             HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBT
T ss_pred             HHHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCcc
Confidence            99999999999999999999999999999999999999999999999988898888999999998     4678999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      +++|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||+++|++|+||||||+||
T Consensus       229 ~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hg  308 (416)
T 1e5m_A          229 DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHG  308 (416)
T ss_dssp             TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred             CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEEC
Confidence            99999999999999999999999999999999999999999987666666788999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSP  500 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~  500 (829)
                      |||+++|++|.++|.++|+..   ..+++|++.|+++||++||||++++++++++|++++|||++|+++|||.++++   
T Consensus       309 tgt~~~D~~E~~al~~~~g~~---~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~---  382 (416)
T 1e5m_A          309 TSTPANDVTETRAIKQALGNH---AYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLD---  382 (416)
T ss_dssp             CSCHHHHHHHHHHHHHHHGGG---GGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSC---
T ss_pred             CCCcCcCHHHHHHHHHHHccc---CCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc---
Confidence            999999999999999999753   23589999999999999999999999999999999999999999999999875   


Q ss_pred             eeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        501 FFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       501 ~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                       +++.+.++|     .++++++|||||||+|+|+||+++
T Consensus       383 -~v~~~~~~~-----~~~~a~~~sfGfGG~n~~~vl~~~  415 (416)
T 1e5m_A          383 -YVPGQSRAL-----IVDVALSNSFGFGGHNVTLAFKKY  415 (416)
T ss_dssp             -CCBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECC
T ss_pred             -ccCCccccC-----CCCEEEEccccCCCeeEEEEEEeC
Confidence             355666777     368999999999999999999985

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=100.00  E-value=7.3e-71  Score=622.57  Aligned_cols=399  Identities=25%  Similarity=0.395  Sum_probs=359.5

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      ..++|+|||||+++|+|.+.++||++|.+|++++++++  ||+...++           .+..+   .++.||+.+| |+
T Consensus         2 ~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~-----------~~~~~---~v~~fd~~~~-i~   64 (413)
T 3o04_A            2 DKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMT--RLNPDDFP-----------VKIAA---ELKDFDVEKY-LE   64 (413)
T ss_dssp             CCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCGGGSS-----------CCEEE---CCSSCCGGGT-SC
T ss_pred             CCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCC--ccccccCc-----------ccccc---ccCCCChhhc-cC
Confidence            45789999999999999999999999999999999985  45443332           12233   3455999999 99


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchh
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +++++.|||+++|+++++++||+|||++++++++.++|||+|++.+++....        ..+....|+.+++...+.++
T Consensus        65 ~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a  144 (413)
T 3o04_A           65 KKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGS  144 (413)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHH
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHH
Confidence            9999999999999999999999999999999999999999999865543221        23566788888888999999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC----CCCCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFDQ  340 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls----~~~~~~pfd~  340 (829)
                      ++|++.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|.+.++.....+...+.++    +++.|+|||.
T Consensus       145 ~~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~  224 (413)
T 3o04_A          145 GQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDK  224 (413)
T ss_dssp             HHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBT
T ss_pred             HHHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999998    6778999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      +++|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.|...++.+++++||+++|++|+||||||+||
T Consensus       225 ~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~Hg  304 (413)
T 3o04_A          225 DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHG  304 (413)
T ss_dssp             TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred             CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeC
Confidence            99999999999999999999999999999999999999999998777778888999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSP  500 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~  500 (829)
                      |||+++|++|.++|.++|+..   ..+++|++.|+++||++||||++++++++++|++++|||++|+++|||.++++.  
T Consensus       305 tgT~~~d~~e~~al~~~~~~~---~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--  379 (413)
T 3o04_A          305 TSTPYNDEYETQAIKTVFGEH---AKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDY--  379 (413)
T ss_dssp             CCCHHHHHHHHHHHHHHHGGG---TTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCC--
T ss_pred             CcCcccCHHHHHHHHHHhccc---CCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCccc--
Confidence            999999999999999999863   235899999999999999999999999999999999999999999999998763  


Q ss_pred             eeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        501 FFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       501 ~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                        ++.+.++     ..++++++|||||||+|+|+||+++.
T Consensus       380 --~~~~~~~-----~~~~~~~~~sfgfgG~na~~vl~~~~  412 (413)
T 3o04_A          380 --VPNEARE-----ANVNVVISNSFGFGGHNATLVFKRIE  412 (413)
T ss_dssp             --CBSSCEE-----CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred             --CCCcccC-----CCCCEEEEeCccCCceEEEEEEEeCC
Confidence              3333333     35789999999999999999999863

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.7e-71  Score=629.91  Aligned_cols=398  Identities=22%  Similarity=0.351  Sum_probs=355.5

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++||||||||++|+|.+.++||++|.+|++++++++  ||+...++           .+..+.+    .||+.+|+|+|+
T Consensus         3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~-----------~~~~~~~----~fd~~~~~i~~~   65 (424)
T 1tqy_A            3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS--FFDPSPYR-----------SQVAAEA----DFDPVAEGFGPR   65 (424)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTTSS-----------CCEEECC----CCCHHHHTCCHH
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCC--CcccccCC-----------cceeEEe----ccCHhhcCCCHH
Confidence            579999999999999999999999999999999986  56543322           2233443    599999999999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc----------ccCccccchhhhccccccchh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL----------ITDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +++.|||+++|+++++++||+|||++++++++.++|||+|++.++|...          ...+....++.+.+..++..+
T Consensus        66 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  145 (424)
T 1tqy_A           66 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP  145 (424)
T ss_dssp             HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccccccccc
Confidence            9999999999999999999999999999999999999999988776432          123445566666666666556


Q ss_pred             h----HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCC
Q psy11396        265 A----RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHC  335 (829)
Q Consensus       265 ~----~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~  335 (829)
                      +    +|++.||++||+++|+++|+|+++||++|+++|++|+||++||||+|.++++..+..|..++++++     ++.|
T Consensus       146 ~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~  225 (424)
T 1tqy_A          146 SVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHAS  225 (424)
T ss_dssp             THHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCC
T ss_pred             chhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCc
Confidence            6    999999999999999999999999999999999999999999999999888998889999999985     6789


Q ss_pred             CCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396        336 YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       336 ~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~  415 (829)
                      +|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||+++|++|+||||
T Consensus       226 rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~  305 (424)
T 1tqy_A          226 RPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDY  305 (424)
T ss_dssp             CTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred             cCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCE
Confidence            99999999999999999999999999999999999999999999999887777777789999999999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy11396        416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK  495 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~  495 (829)
                      ||+|||||+.+|++|.++|.++|+..   ..+++|++.|+++||+++|+|++++++++++|+++.+||++|+++|||.++
T Consensus       306 ve~Hgtgt~~gD~~E~~al~~~f~~~---~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~  382 (424)
T 1tqy_A          306 INAHGSGTRQNDRHETAAYKRALGEH---ARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD  382 (424)
T ss_dssp             EECCCCCCHHHHHHHHHHHHHHTGGG---GGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBC
T ss_pred             EEecCccCcCcCHHHHHHHHHHhccc---CCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Confidence            99999999999999999999999752   245899999999999999999999999999999999999999999999998


Q ss_pred             cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        496 LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       496 ~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                      ++.    ++.+.++|     .++++++|||||||+|+|+||+++++
T Consensus       383 ~~~----v~~~~~~~-----~~~~a~~~sfG~GG~n~~~vl~~~~~  419 (424)
T 1tqy_A          383 LDY----VPLEARER-----KLRSVLTVGSGFGGFQSAMVLRDAET  419 (424)
T ss_dssp             SCC----CBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECHHH
T ss_pred             ccc----CCCcccCC-----CCCEEEEccccCCceEEEEEEccCCc
Confidence            763    55666677     36899999999999999999998753

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=4.6e-71  Score=624.64  Aligned_cols=394  Identities=23%  Similarity=0.323  Sum_probs=356.3

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      ..++|+||||||++|+|.+.++||++|.+|++++++++  ||+...+.           .+.+++++   .||+.+| ++
T Consensus         7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~-----------~~~~~~v~---~fd~~~~-~~   69 (415)
T 1tqy_B            7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT--RFDVSRYP-----------ATLAGQID---DFHAPDH-IP   69 (415)
T ss_dssp             ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT--TTTGGGSS-----------CCEEECCC---SCCHHHH-SC
T ss_pred             CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECC--cccccCCC-----------cceEEEeC---CCCchhc-CC
Confidence            45789999999999999999999999999999999996  67654331           23455554   4898887 99


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchh
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +++++.|||+++|+++++++||+|||++++++++.++|||+|++.++|....        .++..++++.+++...+.++
T Consensus        70 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  149 (415)
T 1tqy_B           70 GRLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNT  149 (415)
T ss_dssp             TTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHH
Confidence            9999999999999999999999999999999999999999999987774322        34567788888888999999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC----CCCCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFDQ  340 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls----~~~~~~pfd~  340 (829)
                      ++|++.||++||+++|+++|+|++.||++|+++|++| ||++||||+|.+.++..+..|...++++    +++.|+|||.
T Consensus       150 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~  228 (415)
T 1tqy_B          150 GQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDE  228 (415)
T ss_dssp             HHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTST
T ss_pred             HHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCC
Confidence            9999999999999999999999999999999999999 9999999999989999999999999999    8889999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCC-ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGD-DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      +++|+++||||+++||+++++|+++|+ +||++|+|++.++|+.+  ++.|+. ++.++|++||+++|++|+||||||+|
T Consensus       229 ~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~--~~~p~~-~~~~ai~~al~~Agl~~~dId~ve~H  305 (415)
T 1tqy_B          229 RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP--GSGRPA-GLERAIRLALNDAGTGPEDVDVVFAD  305 (415)
T ss_dssp             TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCT--TCCCCC-SHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred             CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCC--CCCCCH-HHHHHHHHHHHHcCCCHhHCCEEEEe
Confidence            999999999999999999999999999 99999999999999987  556655 89999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      ||||+++|++|..|+.++|+..     .++|++.|+++||++||||++++++++++|++++|||++|+++|||.++++  
T Consensus       306 gtgt~~~D~~E~~al~~~~g~~-----~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~--  378 (415)
T 1tqy_B          306 GAGVPELDAAEARAIGRVFGRE-----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGID--  378 (415)
T ss_dssp             CCCSHHHHHHHHHHHHHHHCTT-----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCE--
T ss_pred             CCCCcCcCHHHHHHHHHHhCCC-----CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc--
Confidence            9999999999999999999742     389999999999999999999999999999999999999999999999865  


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                        +++.+.++|     .++++++|||||||+|+|+||+++++
T Consensus       379 --~v~~~~~~~-----~~~~a~~~sfGfgG~n~~~vl~~~~~  413 (415)
T 1tqy_B          379 --LVLGEPRST-----APRTALVLARGRWGFNSAAVLRRFAP  413 (415)
T ss_dssp             --ECBSSCBCC-----CCSEEEEEEEETTTEEEEEEEEEC--
T ss_pred             --ccCCCCccC-----CCCEEEEecCcCCCeEEEEEEecCCC
Confidence              466777777     46899999999999999999999764

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=100.00  E-value=1.3e-70  Score=620.15  Aligned_cols=392  Identities=23%  Similarity=0.338  Sum_probs=353.0

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++|||||||+++|+|.+.++||++|.+|+++++++|.  |+...          ....+..+.+   +.||+.+| |++
T Consensus         5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~--~~~~~----------~~~~~~~~~v---~~fd~~~~-i~~   68 (412)
T 4ewg_A            5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPD--WDYFE----------SLHTRLAAPL---PGFAQPAD-WPR   68 (412)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGG--GGGSS----------SCCCCEEBCC---SCCCCCTT-SCH
T ss_pred             CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCc--ccccc----------CCccceeeec---CCCChhhh-CCH
Confidence            47899999999999999999999999999999999974  43220          0112334444   45999998 999


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCC-CCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchh
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGY-NPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl-~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a  264 (829)
                      ++++.|||+++|+++++++||+|||+ +++++++.++|||+|++.+++...        ...+..+.++.+++...+.++
T Consensus        69 ~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  148 (412)
T 4ewg_A           69 KKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTA  148 (412)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHH
T ss_pred             HHHhhCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHH
Confidence            99999999999999999999999999 788899999999999987664322        134566788888899999999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFD  339 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd  339 (829)
                      ++|++.||++||+++|+++|+|+++||++|+++|++|+||++||||+|. .++.....|...+.+++     ++.|+|||
T Consensus       149 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd  227 (412)
T 4ewg_A          149 VNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFD  227 (412)
T ss_dssp             HHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTB
T ss_pred             HHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999 78888889999998876     68899999


Q ss_pred             CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      .+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+  ++.|+..++.+++++||++||++|+||||||+|
T Consensus       228 ~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~--~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~H  305 (412)
T 4ewg_A          228 AKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAH--MTQPTASTMARAMQLALEDAKLDANAIAYVNAH  305 (412)
T ss_dssp             TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSC--SSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred             CCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence            999999999999999999999999999999999999999999976  678899999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccC-CcCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI-KLEN  498 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~-~~~~  498 (829)
                      ||||+.+|++|.+++.++|+.      .++|++.|+++||++||||++++++++++|++++|||++|+++|||.+ +++ 
T Consensus       306 gtgt~~~D~~E~~al~~~~~~------~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~-  378 (412)
T 4ewg_A          306 GTSTDRGDVAESQATARTFGE------RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLD-  378 (412)
T ss_dssp             CCCCHHHHHHHHHHHHHHHCT------TCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCE-
T ss_pred             CCCCccccHHHHHHHHHHcCC------CCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccc-
Confidence            999999999999999999974      278999999999999999999999999999999999999999999998 654 


Q ss_pred             CCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                         +++.+.++|     +++++++|||||||+|+|+||+++
T Consensus       379 ---~v~~~~~~~-----~~~~~~~~sfgfGG~na~~vl~~~  411 (412)
T 4ewg_A          379 ---YIRGEARAI-----DAEYVMSNNFAFGGINTSLIFRRV  411 (412)
T ss_dssp             ---ECCSSCEEC-----CCSEEEEEEEEGGGEEEEEEEECC
T ss_pred             ---cccCcccCC-----CCCEEEEeeecCCcceEEEEEeeC
Confidence               455666666     468999999999999999999975

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=100.00  E-value=2.7e-70  Score=619.30  Aligned_cols=401  Identities=25%  Similarity=0.431  Sum_probs=359.0

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccC----cccccCCcC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLE----DIEIFDPLF  188 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fd~~~  188 (829)
                      ..++|||||||+++|.|.++++||++|++|+++++++|  ||+.+.++           .+..+.++    +...||+.+
T Consensus         8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~--~~~~~~~~-----------~~~~~~~~~~~~~~~~fd~~~   74 (428)
T 3kzu_A            8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVT--EFEVDDLA-----------CQIACRIPVGDGTNGTFNPDL   74 (428)
T ss_dssp             -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECC--SSCCTTSS-----------CCEEECCCBSSSSTTCBCGGG
T ss_pred             cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCC--ccccccCc-----------CceeeEecccccccccCChhh
Confidence            34799999999999999999999999999999999997  56544443           12233333    455799999


Q ss_pred             CCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCC-CCCCceEEEEcccccccccc--------ccCccccchhhhcccc
Q psy11396        189 FNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGES  259 (829)
Q Consensus       189 f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~-i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~  259 (829)
                      | |+|++++.|||+++|+++++++||+|||+++++ +++.++|||+|++.+.+...        ...+..++++..++..
T Consensus        75 ~-i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (428)
T 3kzu_A           75 H-MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL  153 (428)
T ss_dssp             T-SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC
T ss_pred             c-CCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch
Confidence            9 999999999999999999999999999999988 88889999999987654221        1345677888888999


Q ss_pred             ccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC------C
Q psy11396        260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD------G  333 (829)
Q Consensus       260 ~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~------~  333 (829)
                      .+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+.++.....|...+.++++      .
T Consensus       154 ~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~  233 (428)
T 3kzu_A          154 INLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTA  233 (428)
T ss_dssp             TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGG
T ss_pred             hhhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999865      5


Q ss_pred             CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy11396        334 HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDI  413 (829)
Q Consensus       334 ~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dI  413 (829)
                      .|+|||.+++|+++||||+++||+++++|+++|++|+++|+|++.++|+.+...+.+.+.++.+++++||++||++|+||
T Consensus       234 ~~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI  313 (428)
T 3kzu_A          234 ASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEI  313 (428)
T ss_dssp             TCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred             ccCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHe
Confidence            89999999999999999999999999999999999999999999999998876667778899999999999999999999


Q ss_pred             cEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        414 QLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       414 d~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      ||||+||||| .+|++|.+++.++|+..   ..++++++.|+++||++||+|++++++++++|++++|||++|+++|||+
T Consensus       314 d~ve~HgtgT-~~d~~e~~al~~~~g~~---~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~  389 (428)
T 3kzu_A          314 DYINAHGTST-MADTIELGAVERVVGEA---AAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQ  389 (428)
T ss_dssp             CEEECCCCSS-TTHHHHHHHHHHHHGGG---GGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSC
T ss_pred             eEEEecCCcc-hhhHHHHHHHHHHhccC---CCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCC
Confidence            9999999999 99999999999999853   3468999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      ++++.    ++.+.++|     +++++++|||||||+|+|+||++|+
T Consensus       390 ~~~~~----~~~~~~~~-----~~~~a~~~sfGfgG~na~~vl~~~~  427 (428)
T 3kzu_A          390 TRIDL----VPHKPRER-----KIDVALSNSFGFGGTNASLVLRRYT  427 (428)
T ss_dssp             CSSBC----CBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred             CCccc----CCCCCcCC-----CCCEEEEeCcccChhhEEEEEeecC
Confidence            98763    34444444     4789999999999999999999874

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=100.00  E-value=2.1e-70  Score=621.79  Aligned_cols=397  Identities=27%  Similarity=0.389  Sum_probs=356.6

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+||||||++|+|.++++||++|.+|++++++++  ||+...+           ..+..++++   .||+.+ +++++
T Consensus        28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~i~---~fd~~~-~~~~~   90 (437)
T 2gqd_A           28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKIT--RIDTEPY-----------SVHLAGELK---NFNIED-HIDKK   90 (437)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTS-----------SCCEEECCS---SCCGGG-TSCST
T ss_pred             CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCC--ccccccC-----------ccceeEEeC---CCChhc-CCCHH
Confidence            689999999999999999999999999999999986  5654332           233445554   488876 59999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +++.|||+++|+++++++||+|||++++++++.++|||+|++.+++...        ...+..+.++.+++..++.++++
T Consensus        91 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  170 (437)
T 2gqd_A           91 EARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQ  170 (437)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHH
Confidence            9999999999999999999999999999999999999999987764321        12345677888888888999999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC----CCCCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFDQRA  342 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls----~~~~~~pfd~~~  342 (829)
                      |++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.++++..+..|..+++++    +++.|+|||.++
T Consensus       171 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~  250 (437)
T 2gqd_A          171 VSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGR  250 (437)
T ss_dssp             HHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTC
T ss_pred             HHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCC
Confidence            9999999999999999999999999999999999999999999999988999888999999998    467899999999


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||+++|++|+||||||+||||
T Consensus       251 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~Hgtg  330 (437)
T 2gqd_A          251 DGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTS  330 (437)
T ss_dssp             CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCS
T ss_pred             CCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCC
Confidence            99999999999999999999999999999999999999998765555678899999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                      |+++|++|.+++.++|+..   ..+++|++.|+++||++||+|++++++++++|+++.|||++|+++|||.++++    +
T Consensus       331 T~~~D~~E~~al~~~fg~~---~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~----~  403 (437)
T 2gqd_A          331 TPVGDLNEVKAIKNTFGEA---AKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLD----I  403 (437)
T ss_dssp             CHHHHHHHHHHHHHHHGGG---GTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSB----C
T ss_pred             CcCcCHHHHHHHHHHHhcc---CCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence            9999999999999999753   24589999999999999999999999999999999999999999999999876    3


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      ++.+.++|     .++++++|||||||+|+|+||+++.
T Consensus       404 v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~~  436 (437)
T 2gqd_A          404 VPNEAQDL-----DITYAMSNSLGFGGHNAVLVFKKFE  436 (437)
T ss_dssp             CBSSCEEC-----CCSEEEEEEECGGGEEEEEEEECCC
T ss_pred             CCCccccC-----CCCEEEEccCcCCCeeEEEEEEecc
Confidence            55566666     3689999999999999999999863

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.2e-69  Score=611.90  Aligned_cols=397  Identities=25%  Similarity=0.316  Sum_probs=354.4

Q ss_pred             CCCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        111 SINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       111 ~~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      ....++||||||||++|+|.++++||++|.+|+++++++|  ||+.+.         .....+.++++++    |+.+| 
T Consensus        24 ~~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~---------~~~~~~~~~~v~~----d~~~~-   87 (434)
T 2gp6_A           24 GKAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLD--DPFVEE---------FDLPVRIGGHLLE----EFDHQ-   87 (434)
T ss_dssp             TTTSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECC--CHHHHH---------HCCSCCEEECCSC----CSTTS-
T ss_pred             cCCCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCC--cccccc---------ccCccceeEEcCC----chhhh-
Confidence            3455789999999999999999999999999999999997  564110         0112345666654    66667 


Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccc
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSI  262 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  262 (829)
                      +++++++.|||+++|+++++++||+|||+  +++++.++|||+|++.++|..+        ...+..+.|+.+++..++.
T Consensus        88 ~~~~~~~~~d~~~~l~l~aa~~ALedAG~--~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  165 (434)
T 2gp6_A           88 LTRIELRRMGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNG  165 (434)
T ss_dssp             SCHHHHHTCCHHHHHHHHHHHHHHHHTTC--CCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTH
T ss_pred             CCHHHHHhCCHHHHHHHHHHHHHHHhcCC--CccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhh
Confidence            99999999999999999999999999999  5778899999999998877432        1345567888888888999


Q ss_pred             hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcC-CCC-----CCCCCC
Q psy11396        263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSG-MLS-----PDGHCY  336 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g-~ls-----~~~~~~  336 (829)
                      ++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+..+..+..++..+ .++     +++.|+
T Consensus       166 ~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~  245 (434)
T 2gp6_A          166 AAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACR  245 (434)
T ss_dssp             HHHHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCC
T ss_pred             HHHHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCcee
Confidence            99999999999999999999999999999999999999999999999999999998888999998 777     678999


Q ss_pred             CCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        337 SFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       337 pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                      |||.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+...+.|...++.+++++||+++|++|+|||||
T Consensus       246 pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v  325 (434)
T 2gp6_A          246 PFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHV  325 (434)
T ss_dssp             SSBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEE
T ss_pred             cccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEE
Confidence            99999999999999999999999999999999999999999999998755555578899999999999999999999999


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL  496 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~  496 (829)
                      |+|||||+.+|++|.++|.++|+..     ++++++.|+++||++||+|++++++++++|+++.+||++|+++|||.+++
T Consensus       326 e~Hgtgt~~~D~~E~~al~~~fg~~-----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~  400 (434)
T 2gp6_A          326 NAHATGTQVGDLAEGRAINNALGGN-----RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDL  400 (434)
T ss_dssp             ECCCCSCHHHHHHHHHHHHHHHTTC-----CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCC
T ss_pred             EEeCCcCccchHHHHHHHHHHhccC-----CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence            9999999999999999999999742     58999999999999999999999999999999999999999999999986


Q ss_pred             CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      +    +++.+.++|     .+|++++|||||||+|+|+||++|
T Consensus       401 ~----~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~  434 (434)
T 2gp6_A          401 D----VVAGEPRPG-----NYRYAINNSFGFGGHNVAIAFGRY  434 (434)
T ss_dssp             E----ECCSSCCCS-----CCCEEEEEEEETTTEEEEEEEECC
T ss_pred             c----ccCCCccCC-----CCCEEEEeCCcCCCeeEEEEEEeC
Confidence            5    455666666     468999999999999999999974

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=100.00  E-value=1.7e-70  Score=621.40  Aligned_cols=394  Identities=23%  Similarity=0.336  Sum_probs=346.3

Q ss_pred             CCCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396        111 SINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN  190 (829)
Q Consensus       111 ~~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~  190 (829)
                      .+..++|+||||||++|+|.+.++||++|.+|+++++++|  +|+...++           .+..+.    ..||+.+| 
T Consensus        19 ~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~-----------~~~~g~----~~fd~~~~-   80 (428)
T 3mqd_A           19 PGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAE--EYAELGFR-----------CQVHGA----PDIDIESL-   80 (428)
T ss_dssp             ---CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECH--HHHHTTCS-----------CCEEEC----CCCCHHHH-
T ss_pred             CCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCC--cccccCCC-----------cccccc----cCCChhhc-
Confidence            4456899999999999999999999999999999999987  34433221           222333    25999999 


Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccc
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSI  262 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  262 (829)
                      |++++++.|||+++|+++++++||+|||+++++++..++|||+|++.+++...        ...+..++++.+++...+.
T Consensus        81 i~~~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (428)
T 3mqd_A           81 VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSST  160 (428)
T ss_dssp             SCTGGGTTCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTH
T ss_pred             CCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccH
Confidence            99999999999999999999999999999999999999999999987765421        1345677888899999999


Q ss_pred             hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCC
Q psy11396        263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCY  336 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~  336 (829)
                      ++++|++.||++||+++|+++|+||++||++|+++|++|+||++||||+|.+. +.....|...+.++      +++.|+
T Consensus       161 ~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s-~~~~~~~~~~~~ls~~~~~~p~~~~r  239 (428)
T 3mqd_A          161 ASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLD-WTLSVLFDAMGAMSSKYNDTPSTASR  239 (428)
T ss_dssp             HHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-HHHHHHHHHTTCBCCTTTTSGGGSCC
T ss_pred             HHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccc-hHHHHHHHHhhhhcccccCCcccccC
Confidence            99999999999999999999999999999999999999999999999999964 55555688888887      447899


Q ss_pred             CCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        337 SFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       337 pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                      |||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+  ++.|++.++.+++++||+  |++ +|||||
T Consensus       240 pfd~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~~~P~~~~~~~ai~~Al~--gl~-~dId~v  314 (428)
T 3mqd_A          240 AYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYD--MVAPSGEGAIRCMKMALS--TVT-SKIDYI  314 (428)
T ss_dssp             TTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--SSSCCSHHHHHHHHHHHT--TCC-SCCCEE
T ss_pred             cccCCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHh--CCc-cccCEE
Confidence            999999999999999999999999999999999999999999999976  677899999999999999  999 999999


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-  495 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-  495 (829)
                      |+|||||+++|++|.+||.++|+..   ...++|++.|+++||++||||++++++++++|++++|||++|+++|||+++ 
T Consensus       315 e~HgtgT~~~D~~E~~al~~~~~~~---~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~  391 (428)
T 3mqd_A          315 NPHATSTPAGDAPEIEAIRQIFGAG---DVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFAD  391 (428)
T ss_dssp             ECCCCSCHHHHHHHHHHHHHHHCSG---GGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTT
T ss_pred             EEeCCCCCCcCHHHHHHHHHHhccc---CCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCccccc
Confidence            9999999999999999999999842   223789999999999999999999999999999999999999999999986 


Q ss_pred             cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        496 LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       496 ~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      ++     +..+..+|    ..++++++|||||||+|+|+||++++
T Consensus       392 ~~-----~~~~~~~~----~~~~~~~~~sfGfGG~Na~~vl~~~~  427 (428)
T 3mqd_A          392 MP-----IVRKRIDN----VQLNTVLSNSFGFGGTNATLVFQRYQ  427 (428)
T ss_dssp             SC-----BCSSCEES----CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred             CC-----ccCCcccc----CCCCEEEEecCcCCcceEEEEEeecC
Confidence            32     23333333    45799999999999999999999874

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=100.00  E-value=8.4e-70  Score=616.42  Aligned_cols=397  Identities=25%  Similarity=0.357  Sum_probs=356.8

Q ss_pred             CCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396        112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI  191 (829)
Q Consensus       112 ~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i  191 (829)
                      |..++|+|||||+++|++.+.++||++|.+|+++++++|  ||+...+           ..+..++++   .||+.+| +
T Consensus        20 m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~v~---~fd~~~~-~   82 (430)
T 1ox0_A           20 MKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGIT--KFDHSDF-----------DVHNAAEIQ---DFPFDKY-F   82 (430)
T ss_dssp             CCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECC--SSCCTTS-----------SCCEEECCS---SCCHHHH-C
T ss_pred             ccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCC--cccccCC-----------ccceeeecc---CCChhhc-C
Confidence            345789999999999999999999999999999999997  5654332           223444444   4888877 9


Q ss_pred             CHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccch
Q psy11396        192 SPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSIL  263 (829)
Q Consensus       192 ~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  263 (829)
                      ++++++.|||+++|+++++++||+|||++++++++.++|||+|++.+++...        ...+..++++.+++..++.+
T Consensus        83 ~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (430)
T 1ox0_A           83 VKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMA  162 (430)
T ss_dssp             CGGGGGTCCHHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred             CHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHH
Confidence            9999999999999999999999999999999999999999999987764322        12455677888888889999


Q ss_pred             hhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC----CCCCCCCCC
Q psy11396        264 PARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFD  339 (829)
Q Consensus       264 a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls----~~~~~~pfd  339 (829)
                      +++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+..|..+..|..++.++    +++.|+|||
T Consensus       163 a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd  242 (430)
T 1ox0_A          163 SGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFD  242 (430)
T ss_dssp             HHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTB
T ss_pred             HHHHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999998998888999999998    778999999


Q ss_pred             CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      .+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.+++.++.++|++||+++|++|+||||||+|
T Consensus       243 ~~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H  322 (430)
T 1ox0_A          243 KDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAH  322 (430)
T ss_dssp             TTCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECC
T ss_pred             CCCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEe
Confidence            99999999999999999999999999999999999999999998755555577899999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      +|||+.+|+.|..++.++|+.      .++|++.|+++||++||||++++++++++|++++|||++|+++|||.++++  
T Consensus       323 gtgt~~~D~~E~~al~~~~g~------~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~--  394 (430)
T 1ox0_A          323 GTSTPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN--  394 (430)
T ss_dssp             CCSCHHHHHHHHHHHHHHHCS------SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSE--
T ss_pred             CCcCcccCHHHHHHHHHHhCC------CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc--
Confidence            999999999999999999974      489999999999999999999999999999999999999999999999764  


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                        +++.+.++|     .++++++|||||||+|+|+||+++.
T Consensus       395 --~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~~  428 (430)
T 1ox0_A          395 --VVYGQGLEK-----EIPYAISNTFGFGGHNAVLAFKRWE  428 (430)
T ss_dssp             --ECBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred             --cCCCCCcCC-----CCCEEEEeCccCCCceEEEEEeecC
Confidence              355555555     4689999999999999999999875

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=5e-70  Score=615.10  Aligned_cols=394  Identities=26%  Similarity=0.388  Sum_probs=355.5

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++||||||||++|+|.++++||++|.+|++++++++  ||+...+           ..+.++++    .||+.+| ++++
T Consensus         2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~--~~~~~~~-----------~~~~~~~~----~fd~~~~-~~~~   63 (408)
T 1j3n_A            2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDASAL-----------PVRIAAEV----DVDPGAY-LDRK   63 (408)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTTS-----------SCCEEECC----CCCGGGT-SCHH
T ss_pred             CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeecc--ccCcccC-----------ccceEEEE----ccChhhc-CCHH
Confidence            579999999999999999999999999999999986  5654332           23345555    3899887 9999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +++.|||+++|+++++++||+|||+++++++..++||++|++.++|..+        ...+..++++.+++..++.++++
T Consensus        64 ~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  143 (408)
T 1j3n_A           64 ELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAH  143 (408)
T ss_dssp             HHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHH
Confidence            9999999999999999999999999999999999999999988776432        13455677888888888999999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQR  341 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~~  341 (829)
                      |++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+.++.....|...+.+++     ++.|+|||.+
T Consensus       144 ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~  223 (408)
T 1j3n_A          144 IAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS  223 (408)
T ss_dssp             HHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred             HHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCC
Confidence            99999999999999999999999999999999999999999999999899999999999999985     4579999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      ++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+...+.|++.++.+++++||+++|++|+||||||+|||
T Consensus       224 ~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgt  303 (408)
T 1j3n_A          224 RDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGT  303 (408)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred             CCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence            99999999999999999999999999999999999999999886666668889999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                      ||+.+|++|..++.++|+..   ..++++++.|+++||+++|||++++++++++|++++|||++|+++|||.++++.   
T Consensus       304 gt~~gD~~E~~al~~~~g~~---~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~---  377 (408)
T 1j3n_A          304 STPVGDRAEVLAIKRVFGDH---AKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDF---  377 (408)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH---HTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBC---
T ss_pred             cCcccCHHHHHHHHHHhcCc---CCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc---
Confidence            99999999999999999752   235899999999999999999999999999999999999999999999998763   


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                       ++ +.++|     +++++++|||||||+|+|+||+++
T Consensus       378 -v~-~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~  408 (408)
T 1j3n_A          378 -VP-EPREA-----KVDYALSNSFAFGGHNAVLAFKRV  408 (408)
T ss_dssp             -CS-SCEEC-----CCSEEEEEEECTTSEEEEEEEECC
T ss_pred             -CC-CCcCC-----CCCEEEEecccCCcceEEEEEecC
Confidence             33 56667     368999999999999999999964

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=100.00  E-value=5.6e-70  Score=620.71  Aligned_cols=402  Identities=23%  Similarity=0.317  Sum_probs=360.8

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCc-----ccccCCcC
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLED-----IEIFDPLF  188 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~fd~~~  188 (829)
                      .++||||||||++|+|.+.++||++|.+|++++++++  ||+...++           .+.++++++     +..||+.+
T Consensus        23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~--~~~~~~~~-----------~~~~g~v~~~~~~~~~~fd~~~   89 (451)
T 4ddo_A           23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLG--DDIAGELS-----------AKVGGTVQDVAEDPEGGFDPER   89 (451)
T ss_dssp             -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--HHHHTTSS-----------CCEEECCCCTTTCTTTCCCGGG
T ss_pred             CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCC--cccccccc-----------CccceEccccccccccccchhh
Confidence            3689999999999999999999999999999999986  56544332           334555553     34799999


Q ss_pred             CCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCC-CCCceEEEEccccccccccc--------cCccccchhhhcccc
Q psy11396        189 FNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSL-SGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGES  259 (829)
Q Consensus       189 f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~  259 (829)
                      | |++++++.|||+++|+++++++||+|||++++++ +..++|||+|++.+++....        ..+..+.++.+++..
T Consensus        90 ~-i~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (451)
T 4ddo_A           90 S-VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFL  168 (451)
T ss_dssp             T-SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHC
T ss_pred             h-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccc
Confidence            9 9999999999999999999999999999999999 88999999999876543221        235567788888888


Q ss_pred             ccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC------C
Q psy11396        260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD------G  333 (829)
Q Consensus       260 ~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~------~  333 (829)
                      .+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.+..+..+..+...+++++.      +
T Consensus       169 ~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~  248 (451)
T 4ddo_A          169 SNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVR  248 (451)
T ss_dssp             TTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGG
T ss_pred             cchHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999865      6


Q ss_pred             CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy11396        334 HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDI  413 (829)
Q Consensus       334 ~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dI  413 (829)
                      .|+|||.+++|+++||||+++||+++++|+++|++|+++|+|++.++|+.+.....|+..++.+++++||+++|++|+||
T Consensus       249 ~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dI  328 (451)
T 4ddo_A          249 ASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQV  328 (451)
T ss_dssp             SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred             cccccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence            89999999999999999999999999999999999999999999999998877777788899999999999999999999


Q ss_pred             cEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        414 QLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       414 d~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      ||||+|||||+++|++|..++.++|+.    ..+++|++.|+++||++||||++++++++++|++++|||++|+++|||.
T Consensus       329 d~ve~Hgtgt~~~d~~E~~al~~~~~~----~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~  404 (451)
T 4ddo_A          329 DYVNAHATSTPVGDAGEIEALKTVFGV----GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPA  404 (451)
T ss_dssp             CEEECCCCSCHHHHHHHHHHHHHHHCS----SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGG
T ss_pred             CEEEecCCcCcccCHHHHHHHHHHhCC----CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence            999999999999999999999999985    3458999999999999999999999999999999999999999999999


Q ss_pred             C-CcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecccC
Q psy11396        494 I-KLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKN  542 (829)
Q Consensus       494 ~-~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~  542 (829)
                      + +++    +++.+.++|     +++++++|||||||+|+|+||++++++
T Consensus       405 ~~~~~----~~~~~~~~~-----~~~~a~~~sfgfgG~na~~vl~~~~~~  445 (451)
T 4ddo_A          405 ADGLD----LIGPAARHV-----PVEIALSNGFGFGGVNASVLFRRYPSD  445 (451)
T ss_dssp             GTTSE----ECCSSCEEC-----CCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred             ccccc----ccCCCCCCC-----CcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence            8 443    345555555     468999999999999999999999764

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=100.00  E-value=3.1e-70  Score=615.36  Aligned_cols=387  Identities=26%  Similarity=0.370  Sum_probs=344.3

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|+||||||++|+|.+.++||++|.+|+++++++|  ||+...+           ..+.++++   + ||+.+| ++++
T Consensus         2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~-----------~~~~~~~v---~-fd~~~~-~~~~   63 (406)
T 2vba_A            2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQ--ELKDSGM-----------RSHVWGNV---K-LDTTGL-IDRK   63 (406)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECH--HHHHTTC-----------SCCEEECC---C-CCCTTS-SCHH
T ss_pred             CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCC--cccccCC-----------ccceEEEe---c-CChhhc-CCHH
Confidence            579999999999999999999999999999999986  5543322           12334444   3 899988 9999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCC-CceEEEEcccccccccc---------ccCccccchhhhccccccchh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSG-SLCGVFVGCAVSDYNKL---------ITDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~-~~~Gv~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +++.|||+++|+++++++||+|||+++++++. .++|||+|++.+++...         ...+..++|+.+++...+.++
T Consensus        64 ~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  143 (406)
T 2vba_A           64 VVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVS  143 (406)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHH
Confidence            99999999999999999999999999888887 89999999988776322         123445677888888889999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSF  338 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pf  338 (829)
                      ++|++.||++||+++|+++|+|+++||++|+++|++|+||++||||+|.++.+.... |..+++++      +++.|+||
T Consensus       144 ~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pf  222 (406)
T 2vba_A          144 ACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTY  222 (406)
T ss_dssp             HHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTT
T ss_pred             HHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcC
Confidence            999999999999999999999999999999999999999999999999988887777 99999998      46889999


Q ss_pred             CCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy11396        339 DQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEA  418 (829)
Q Consensus       339 d~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~  418 (829)
                      |.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+  ++.|++.++.++|++||+++|   +||||||+
T Consensus       223 d~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~t~p~~~~~~~ai~~al~~ag---~dId~ve~  297 (406)
T 2vba_A          223 DAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNS  297 (406)
T ss_dssp             BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC--TTSCCSHHHHHHHHHHHTTCC---SCCCEEEC
T ss_pred             cCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCC--CCCCCHHHHHHHHHHHHhhCC---CCccEEEe
Confidence            9999999999999999999999999999999999999999999975  678889999999999999999   89999999


Q ss_pred             cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cC
Q psy11396        419 HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LE  497 (829)
Q Consensus       419 hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~  497 (829)
                      |||||+.+|++|.++|.++|+..     .++|++.|+++||++||||++++++++++|+++.|||++|+++|||.++ ++
T Consensus       298 HgtgT~~gD~~E~~al~~~fg~~-----~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~  372 (406)
T 2vba_A          298 HGTSTPVGDVKELAAIREVFGDK-----SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN  372 (406)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHTTC-----CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE
T ss_pred             eCccCcccCHHHHHHHHHHhCcC-----CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccc
Confidence            99999999999999999999742     2789999999999999999999999999999999999999999999986 43


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                          +++...     .. .+|++++|||||||+|+|+||++++
T Consensus       373 ----~v~~~~-----~~-~~~~a~~~sfGfgG~na~~vl~~~~  405 (406)
T 2vba_A          373 ----IVTETT-----DR-ELTTVMSNSFGFGGTNATLVMRKLK  405 (406)
T ss_dssp             ----ECCSCE-----EC-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred             ----cCCccc-----CC-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence                232221     12 5789999999999999999999864

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=100.00  E-value=1.6e-69  Score=610.72  Aligned_cols=394  Identities=24%  Similarity=0.319  Sum_probs=350.2

Q ss_pred             CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396        113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS  192 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~  192 (829)
                      ..++||||||||++|+|.++++||++|.+|+++++++|  ||+.+.         ....++.++++++    |+.+| ++
T Consensus        10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~---------~~~~~~~~~~~~~----d~~~~-~~   73 (416)
T 2wge_A           10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALE--DEFVTK---------WDLAVKIGGHLKD----PVDSH-MG   73 (416)
T ss_dssp             SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECC--CHHHHH---------HTCSCCEEBCCSS----CGGGG-CC
T ss_pred             CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCC--cccccc---------ccCCccEEEEeCC----chhhh-CC
Confidence            45789999999999999999999999999999999997  554111         0123455677765    67777 99


Q ss_pred             HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchh
Q psy11396        193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +++++.|||+++|+++++++||+|||+  ++++..++|||+|++.++|....        ..+..+.|+.+++...+.++
T Consensus        74 ~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a  151 (416)
T 2wge_A           74 RLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAA  151 (416)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHH
Confidence            999999999999999999999999999  67888999999999887764321        24556788888888899999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFD  339 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd  339 (829)
                      ++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.++.+.....|...+.++     ++..|+|||
T Consensus       152 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd  231 (416)
T 2wge_A          152 AVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFD  231 (416)
T ss_dssp             HHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTB
T ss_pred             HHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccc
Confidence            999999999999999999999999999999999999999999999999999998888999999998     578899999


Q ss_pred             CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      .+++|+++|||++++||+++++|+++|++++++|+|++.++|+.+...+.+.+.++.++++++|+++|++|+||||||+|
T Consensus       232 ~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~H  311 (416)
T 2wge_A          232 KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAH  311 (416)
T ss_dssp             TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred             cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence            99999999999999999999999999999999999999999998754444477899999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      ||||+.||++|..++..+ +.     .++++++.|+++||++||+|++++++++++|++++|||++||++|||.++++  
T Consensus       312 gtgT~~gD~~E~~al~~~-~~-----~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~--  383 (416)
T 2wge_A          312 GTATPIGDAAEANAIRVA-GC-----DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLD--  383 (416)
T ss_dssp             CCCCHHHHHHHHHHHHHT-TC-----TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCE--
T ss_pred             CCCCcCCCHHHHHHHHHh-cc-----CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc--
Confidence            999999999999999887 42     1489999999999999999999999999999999999999999999999765  


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                        +++.+.++|     .+|+++||||||||+|+|+||++|
T Consensus       384 --~v~~~~~~~-----~~~~a~~~sfGfGG~na~~vl~~~  416 (416)
T 2wge_A          384 --VVAGEPRYG-----DYRYAVNNSFGFGGHNVALAFGRY  416 (416)
T ss_dssp             --ECCSSCEEC-----CCCEEEEEEEETTTEEEEEEEECC
T ss_pred             --cCCCCCccC-----CCCEEEEeCcccCceeEEEEEEeC
Confidence              344444433     578999999999999999999974

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=100.00  E-value=2e-70  Score=621.28  Aligned_cols=410  Identities=23%  Similarity=0.340  Sum_probs=358.9

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCccc-ccCCcccc--ccCcceeecccccC---cccccCCcC
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIID-DFYDSDKN--AIGKTICKKMGSLE---DIEIFDPLF  188 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~-~~~~~~~~--~~~~~~~~~~~~~~---~~~~fd~~~  188 (829)
                      ++||||||||++|+|.++++||++|.+|+++++++|  ||+.. .+|++...  ..+...++.+++++   +++.||+.+
T Consensus         1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~   78 (431)
T 2ix4_A            1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLT--LDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEAL   78 (431)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECC--GGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHH
T ss_pred             CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCC--hhhhhccccccccccccccCcccceeEEeccccccccCChhh
Confidence            379999999999999999999999999999999997  45422 22322211  12334566778887   567899987


Q ss_pred             CCCCHHHhhcCCHHHHHHHHHHHHHHHHcCC-CCCCCCCCceEEEEcccccccccc--------ccCccccchhhhcccc
Q psy11396        189 FNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-NPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGES  259 (829)
Q Consensus       189 f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl-~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~  259 (829)
                      | ++++   .|||+++|+++++++||+|||+ +++++++.++|||+|++.+++..+        ...+..+.|+.+++..
T Consensus        79 ~-~~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  154 (431)
T 2ix4_A           79 W-LNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL  154 (431)
T ss_dssp             H-SCST---TCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred             c-CChh---hCCHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence            7 7776   8999999999999999999999 888888889999999887664321        1234567788888888


Q ss_pred             ccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC------CC
Q psy11396        260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP------DG  333 (829)
Q Consensus       260 ~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~------~~  333 (829)
                      .+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.++.+.....|..++++++      ++
T Consensus       155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~  234 (431)
T 2ix4_A          155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQE  234 (431)
T ss_dssp             TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGG
T ss_pred             hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccc
Confidence            899999999999999999999999999999999999999999999999999999999988888999999875      56


Q ss_pred             CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy11396        334 HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDI  413 (829)
Q Consensus       334 ~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dI  413 (829)
                      .|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+...+.+.+.++.+++++||+++|++|+||
T Consensus       235 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI  314 (431)
T 2ix4_A          235 ASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQI  314 (431)
T ss_dssp             SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred             ccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence            89999999999999999999999999999999999999999999999998755445577899999999999999999999


Q ss_pred             cEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        414 QLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       414 d~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      ||||+|||||+++|++|.+++..+|+.... ..+++|++.|+++||++||||++++++++++|++++|||++|+++|||.
T Consensus       315 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~-~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~  393 (431)
T 2ix4_A          315 DYVNAHATSTPIGDAVEARAIKTVFSEHAT-SGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPI  393 (431)
T ss_dssp             CEEECCCCSCHHHHHHHHHHHHHHHTHHHH-TSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTT
T ss_pred             CEEEEeCCcCcccCHHHHHHHHHHHccccc-CCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCC
Confidence            999999999999999999999999975321 2458999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      ++++    +++.+.++|+    .+|++++|||||||+|+|+||+++
T Consensus       394 ~~~~----~v~~~~~~~~----~~~~a~~~sfGfGG~na~~il~~~  431 (431)
T 2ix4_A          394 FDKR----FMPLTTSKKM----LVRTAMSNSFGFGGTNASLLFASI  431 (431)
T ss_dssp             CCSS----SCCCSSCEEC----CCSEEEEEEEETTTEEEEEEEECC
T ss_pred             CCcc----cCCccccccC----CCCEEEEecccCCCeeEEEEEeeC
Confidence            9875    3556677773    468999999999999999999974

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.1e-65  Score=643.53  Aligned_cols=476  Identities=18%  Similarity=0.212  Sum_probs=394.8

Q ss_pred             HHHHHHHhhhcCccccCceecccccccccccc-c--cCCC----cCc-------cCCCCCCEEEEecccccCCCCCHHHH
Q psy11396         70 DDIDKSIKKNNSKIINDTISYDNSKKLKSKNL-S--INND----DFD-------KSINNDDIAIIGISGQFPKANNVKKF  135 (829)
Q Consensus        70 ~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~-~--~~~~----~~~-------~~~~~~~IaItG~g~~~p~g~~~~~~  135 (829)
                      .++|++|.+.||++++.+..||+++|...... .  ...+    +.+       .....++|+|+++       .+.++|
T Consensus      1091 ~~~~~~i~~~tgir~~~~~~fd~~~p~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~I~~~-------~~~~~~ 1163 (1887)
T 2uv8_A         1091 AKYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEEDLEPFEASKETAEQFKHQHGDKVDIFEI-------PETGEY 1163 (1887)
T ss_dssp             HHHHHHHHHTSSEEECCGGGGTTCCTTSEEEEEEEECSSCCCCEEECHHHHHHHHHHHGGGEEEEEC-------TTTSCE
T ss_pred             HHHHHHHHHhcCCCCCCcccCCCCCHHHHHHHHHHHhcccccccccCccchhhHhhcCCCceeEeec-------CchHHH
Confidence            34599999999999999999999988642111 0  0000    000       0113467888853       457899


Q ss_pred             HHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHH
Q psy11396        136 WNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIE  215 (829)
Q Consensus       136 w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~~~~~d~~~~l~l~aa~~AL~  215 (829)
                      |.+|.+|.+++.+.+. +|                ....+|+++  +.||+.+|||+|++++.|||+++|+++++++||+
T Consensus      1164 w~~L~~G~~~i~p~~~-~~----------------~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~ 1224 (1887)
T 2uv8_A         1164 SVKLLKGATLYIPKAL-RF----------------DRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFI 1224 (1887)
T ss_dssp             EEEECTTCEEEEEEEE-CC----------------SCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCceeecccC-CC----------------CccEEEEEC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHH
Confidence            9999999999988531 11                234567775  3599999999999999999999999999999999


Q ss_pred             HcCCC-CCC----CCCCceEEEEcccccccccccc------CccccchhhhccccccchhhHhhh-hccCCCcceeeccc
Q psy11396        216 DAGYN-PFS----LSGSLCGVFVGCAVSDYNKLIT------DPKMYNAYALMGESVSILPARVSY-FLNLQGPCLAIDTA  283 (829)
Q Consensus       216 dAGl~-~~~----i~~~~~Gv~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~tv~~a  283 (829)
                      ||||+ +.+    +++.++|||+|++.+++..+..      ....+.++.+.....|.++++|++ .||++||+++|+++
T Consensus      1225 dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv~tA 1304 (1887)
T 2uv8_A         1225 ASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGA 1304 (1887)
T ss_dssp             HTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCCCCCCG
T ss_pred             HcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHHcCCccceEEeecc
Confidence            99995 666    8899999999998876432211      112356677777888999999999 59999999999999


Q ss_pred             hhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----------CCCCCCCCCCCCCCcccccceE
Q psy11396        284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----------PDGHCYSFDQRANGFVPGEGVG  352 (829)
Q Consensus       284 csSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----------~~~~~~pfd~~~~G~~~gEGaa  352 (829)
                      |+||+.||+.||++|++|+||++||||+|.+ .+.....|..+++++           +++.|||||.+++||++|||+|
T Consensus      1305 CASsl~Al~~A~~~I~sG~advaLvGGvd~~-~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gEGag 1383 (1887)
T 2uv8_A         1305 CATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAG 1383 (1887)
T ss_dssp             GGHHHHHHHHHHHHHHTTSCSEEEEEEEECC-CHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBCEEE
T ss_pred             cccHHHHHHHHHHHHHcCCCCEEEEeeeccC-ChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCcccccceE
Confidence            9999999999999999999999999999984 788888999999998           6789999999999999999999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCC------------------HH---------------------
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPN------------------TK---------------------  393 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~------------------~~---------------------  393 (829)
                      ++||++++.|+++|++||++|+|+++++|+.+.+.++|+                  ..                     
T Consensus      1384 ~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~ 1463 (1887)
T 2uv8_A         1384 IQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWV 1463 (1887)
T ss_dssp             EEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999876655553                  10                     


Q ss_pred             ----------------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        394 ----------------------SQ-------------------------------IRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       394 ----------------------~~-------------------------------~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                                            +|                               .++|++||+++|++|+||||||+||
T Consensus      1464 ~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~veaHG 1543 (1887)
T 2uv8_A         1464 ENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHG 1543 (1887)
T ss_dssp             HHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEECCC
T ss_pred             hhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEEecC
Confidence                                  22                               3699999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHhccc-CCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKF-SYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LEN  498 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~-~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~  498 (829)
                      |||++||++|.++|.++|+.. .....++++++.|+++||++||||++++++++++|++|+|||++|+++|||.++ ++ 
T Consensus      1544 TgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~- 1622 (1887)
T 2uv8_A         1544 TSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFE- 1622 (1887)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCT-
T ss_pred             CCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCcccccc-
Confidence            999999999999999999853 333457999999999999999999999999999999999999999999999995 43 


Q ss_pred             CCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhh
Q psy11396        499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICN  578 (829)
Q Consensus       499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~  578 (829)
                       .+.++.+.++|    ..+++++||||||||+|+|+||++++......       ....+-..+++.+..+++....+++
T Consensus      1623 -~l~~~~~~~~~----~~~r~a~v~SFGFGG~NahvIle~p~~~~~~l-------~~~~~~~y~~r~~~r~~~~~~~~~~ 1690 (1887)
T 2uv8_A         1623 -YVLYPSKTLKT----DGVRAVSITSFGFGQKGGQAIVVHPDYLYGAI-------TEDRYNEYVAKVSAREKSAYKFFHN 1690 (1887)
T ss_dssp             -TEECCSSCEEC----SCCCEEEEEEEETTTEEEEEEEECTHHHHTTS-------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -ccccccccccC----CCCCEEEEccCCCCCccEEEEEecCCchhhcc-------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             45567888888    35799999999999999999999976422111       1233455778888888888888888


Q ss_pred             hcccCCc
Q psy11396        579 YISKDLK  585 (829)
Q Consensus       579 ~l~~n~~  585 (829)
                      .+..|++
T Consensus      1691 ~~~~~~~ 1697 (1887)
T 2uv8_A         1691 GMIYNKL 1697 (1887)
T ss_dssp             HHHTSCS
T ss_pred             HHhcCCc
Confidence            8888765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2.8e-66  Score=647.33  Aligned_cols=475  Identities=17%  Similarity=0.201  Sum_probs=394.3

Q ss_pred             HHHHHHhhhcCccccCceeccccccccccccc---cCCC----cCcc-------CCCCCCEEEEecccccCCCCCHHHHH
Q psy11396         71 DIDKSIKKNNSKIINDTISYDNSKKLKSKNLS---INND----DFDK-------SINNDDIAIIGISGQFPKANNVKKFW  136 (829)
Q Consensus        71 ~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~---~~~~----~~~~-------~~~~~~IaItG~g~~~p~g~~~~~~w  136 (829)
                      +++++|.+.+|++++.+..||+|+|.+...+.   ...+    +.+.       ....++|+|+.       ..+.++||
T Consensus      1067 ~~~~~i~~~tgir~~~~~~fd~~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~-------~~~~~~~w 1139 (1878)
T 2uv9_A         1067 KYEKYILEHSGIRLIEPELFGGYDPNRKQLLQEVVIEQDLEPFEASKEQAEEFKREHGDKVEIFE-------IPETGQYT 1139 (1878)
T ss_dssp             HHHHHHHHTSEEEECCGGGGTTCCGGGEEEEEEEECCSCCCCEEECHHHHHHHHHHHGGGEEEEE-------CTTTSCEE
T ss_pred             HHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHhhcccCCCccccChhhhhhccccCCCCeeEee-------CCChHHHH
Confidence            67999999999999999999999987652211   1100    0000       11246788873       35668999


Q ss_pred             HHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHH
Q psy11396        137 NNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIED  216 (829)
Q Consensus       137 ~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~~~~~d~~~~l~l~aa~~AL~d  216 (829)
                      .+|.+|++++.+.+ .+                .....+|+++  +.||+.+|||+|++++.|||+++|+++++++||+|
T Consensus      1140 ~~L~~G~~~i~p~~-~~----------------~~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~ 1200 (1878)
T 2uv9_A         1140 VRLRKGATLLIPKA-LQ----------------FDRLVAGQIP--TGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLS 1200 (1878)
T ss_dssp             EEECTTCEEEEEEE-EC----------------CSCCEEEECC--TTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCeeeecC-CC----------------CcceEEEEeC--CCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            99999999998842 11                1234567776  35999999999999999999999999999999999


Q ss_pred             cCCC-CCC----CCCCceEEEEccccccccccc---c---CccccchhhhccccccchhhHhhh-hccCCCcceeeccch
Q psy11396        217 AGYN-PFS----LSGSLCGVFVGCAVSDYNKLI---T---DPKMYNAYALMGESVSILPARVSY-FLNLQGPCLAIDTAC  284 (829)
Q Consensus       217 AGl~-~~~----i~~~~~Gv~~g~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~tv~~ac  284 (829)
                      |||+ +.+    ++..++|||+|++.+++..+.   .   ....+.++.+.+...|.++++|++ .||++||+++++++|
T Consensus      1201 AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tAC 1280 (1878)
T 2uv9_A         1201 SGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGAC 1280 (1878)
T ss_dssp             TTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCGG
T ss_pred             CCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCcc
Confidence            9998 666    789999999999988743221   1   112356777888889999999999 599999999999999


Q ss_pred             hhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----------CCCCCCCCCCCCCCcccccceEE
Q psy11396        285 SSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----------PDGHCYSFDQRANGFVPGEGVGV  353 (829)
Q Consensus       285 sSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----------~~~~~~pfd~~~~G~~~gEGaaa  353 (829)
                      +||+.||+.||+.|++|+||++||||+|. ..+.....|..+++++           +++.||||+.+++||++|||+|+
T Consensus      1281 ASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~ 1359 (1878)
T 2uv9_A         1281 ATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGV 1359 (1878)
T ss_dssp             GHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEE
T ss_pred             hHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEE
Confidence            99999999999999999999999999999 5788888999999998           67999999999999999999999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCC----------------H-------------------------
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPN----------------T-------------------------  392 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~----------------~-------------------------  392 (829)
                      +||++++.|+++|++||++|+|+++++|+.+.+.+.|.                +                         
T Consensus      1360 vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~ 1439 (1878)
T 2uv9_A         1360 QVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESE 1439 (1878)
T ss_dssp             EEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999877666662                0                         


Q ss_pred             --------------------------HHHH-------------------------------HHHHHHHHHcCCCCCCccE
Q psy11396        393 --------------------------KSQI-------------------------------RLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       393 --------------------------~~~~-------------------------------~ai~~Al~~Agl~~~dId~  415 (829)
                                                .+|+                               ++|++||+++|++++||||
T Consensus      1440 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~ 1519 (1878)
T 2uv9_A         1440 YLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGV 1519 (1878)
T ss_dssp             HHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEE
T ss_pred             hhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHeeE
Confidence                                      1232                               7999999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHHHHHhccc-CCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccC
Q psy11396        416 LEAHGTGTKLGDPIEFEALCESFNKF-SYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI  494 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al~~~~~~~-~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~  494 (829)
                      ||+|||||++||++|.++|.++|+.. .....++++++.|+++||+.||||++++++++++|++|+|||++|+++|||.+
T Consensus      1520 veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i 1599 (1878)
T 2uv9_A         1520 ASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVM 1599 (1878)
T ss_dssp             EECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGG
T ss_pred             EEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCcc
Confidence            99999999999999999999999863 33345799999999999999999999999999999999999999999999999


Q ss_pred             C-cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHH
Q psy11396        495 K-LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYA  573 (829)
Q Consensus       495 ~-~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~  573 (829)
                      + ++.  +.++.+..+|    ..+++++||||||||+|+|+||++++......       ....+-..++|.+..+++..
T Consensus      1600 ~~~~~--v~~~~~~~~~----~~~r~a~v~SFGFGG~NahvIle~p~~~~~~l-------~~~~~~~y~~r~~~r~~~~~ 1666 (1878)
T 2uv9_A         1600 EQFDY--IVYPSRSIKT----DGIKAFSVTSFGFGQKGAQAIGVHPKYLFATL-------DKAQYEAYCVKVQARQKKAY 1666 (1878)
T ss_dssp             GGCTT--EECCSSCEEC----SCCCEEEEEEEETTTEEEEEEEECTHHHHTTS-------CHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc--cccccccccC----CCCCEEEEccCCCCCeeEEEEEecCCcchhhc-------CHHHHHHHHHHHHHHHHHHH
Confidence            5 442  3345555555    35799999999999999999999976422111       12234457788888888888


Q ss_pred             HHHhhhcccCCc
Q psy11396        574 KLICNYISKDLK  585 (829)
Q Consensus       574 ~~~~~~l~~n~~  585 (829)
                      ..++..+.+|++
T Consensus      1667 ~~~~~~~~~~~l 1678 (1878)
T 2uv9_A         1667 RFFHNGLINNKL 1678 (1878)
T ss_dssp             HHHHHHHHHTCS
T ss_pred             HHHHHHHhcCCc
Confidence            888888888765

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-67  Score=637.42  Aligned_cols=481  Identities=18%  Similarity=0.198  Sum_probs=388.4

Q ss_pred             ccccHHHHHHHHhhhcCccccCceecccccccccccccc---CCC----cCccCC-------CCCCEEEEecccccCCCC
Q psy11396         65 KSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSI---NND----DFDKSI-------NNDDIAIIGISGQFPKAN  130 (829)
Q Consensus        65 ~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~~---~~~----~~~~~~-------~~~~IaItG~g~~~p~g~  130 (829)
                      |.-...++|++|.+.+|++++.+..||+|+|........   ..+    +.+...       ..++|+|++       ..
T Consensus       887 d~~i~~~~~~~i~~~tGiRl~~~~~fd~~~p~~~~~L~e~~l~~d~~~~~~s~~~a~~~~~~~~d~v~I~~-------i~  959 (1688)
T 2pff_A          887 DKDVKAKYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEEDLEPFEASKETAEQFKHQHGDKVDIFE-------IP  959 (1688)
T ss_dssp             SCCCTTTSSSSSSSGGGTTTSSSSCCSSSSSSCCSSSEECCCCCCCSCCCCCCCCTTHHHHHHHHSCTTSC-------CC
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCccCCCCCHHHHhHhhHHhcCCCCcccccChhhhhhccccCCCCeEEec-------CC
Confidence            555567999999999999999999999999875211110   000    111110       113455542       34


Q ss_pred             CHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHHHhhcCCHHHHHHHHHH
Q psy11396        131 NVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNC  210 (829)
Q Consensus       131 ~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~~~~~d~~~~l~l~aa  210 (829)
                      +.++||++|.+|++++.+.+ .                ......+|+++  +.||+.+|||++++++.|||+++|+++++
T Consensus       960 ~~eefW~~L~~G~~~i~p~~-~----------------~~~~~vaG~Ip--~gFD~~~fGIs~~ea~~mDP~qrLaLeAa 1020 (1688)
T 2pff_A          960 ETGEYSVKLLKGATLYIPKA-L----------------RFDRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSV 1020 (1688)
T ss_dssp             CCCSSSCCCCCCTTCCCCCC-C----------------CEECCSSCSCC--CCCCCCCSSCCTTTBTTBCSSTTHHHHHH
T ss_pred             CHHHHHHHHHcCCCEEecCC-C----------------CCCceEEEEEC--CCCChhhCCCCHHHHhccCHHHHHHHHHH
Confidence            67899999999999998732 1                12345677776  35999999999999999999999999999


Q ss_pred             HHHHHHcCCC-CCC----CCCCceEEEEcccccccccccc------CccccchhhhccccccchhhHhhh-hccCCCcce
Q psy11396        211 WTCIEDAGYN-PFS----LSGSLCGVFVGCAVSDYNKLIT------DPKMYNAYALMGESVSILPARVSY-FLNLQGPCL  278 (829)
Q Consensus       211 ~~AL~dAGl~-~~~----i~~~~~Gv~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~  278 (829)
                      ++||+||||+ +.+    ++..++|||+|++.+++..+..      ....+.++.+.....|.+++++++ .||++||++
T Consensus      1021 ~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~ 1100 (1688)
T 2pff_A         1021 VEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIK 1100 (1688)
T ss_dssp             HHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCC
T ss_pred             HHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHHcCCcCCeE
Confidence            9999999998 666    7889999999998887643221      112356667777788999999999 799999999


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----------CCCCCCCCCCCCCCccc
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----------PDGHCYSFDQRANGFVP  347 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----------~~~~~~pfd~~~~G~~~  347 (829)
                      +|+++||||+.||+.|+++|++|+||++||||+|.+ .+.....|..+++++           +++.|||||.+++||++
T Consensus      1101 TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~m-sp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~ 1179 (1688)
T 2pff_A         1101 TPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFME 1179 (1688)
T ss_dssp             CCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCC-CTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCC
T ss_pred             EecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccC-CHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCcc
Confidence            999999999999999999999999999999999986 566666788889887           66899999999999999


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCC------------------HH----------------
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPN------------------TK----------------  393 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~------------------~~----------------  393 (829)
                      |||||++||++++.|+++|++||++|+|+++++|+.+.+.++|.                  +.                
T Consensus      1180 GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~ 1259 (1688)
T 2pff_A         1180 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ 1259 (1688)
T ss_dssp             CSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHH
T ss_pred             ccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998765544442                  11                


Q ss_pred             ---------------------------HH-------------------------------HHHHHHHHHHcCCCCCCccE
Q psy11396        394 ---------------------------SQ-------------------------------IRLQTKIYKKFNINPNDIQL  415 (829)
Q Consensus       394 ---------------------------~~-------------------------------~~ai~~Al~~Agl~~~dId~  415 (829)
                                                 +|                               .++|++||+++|++|+||||
T Consensus      1260 i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdy 1339 (1688)
T 2pff_A         1260 IKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGV 1339 (1688)
T ss_dssp             HHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCC
T ss_pred             HHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeE
Confidence                                       22                               47899999999999999999


Q ss_pred             EEecCCCCCCCChHHHHHHHHHhccc-CCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccC
Q psy11396        416 LEAHGTGTKLGDPIEFEALCESFNKF-SYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI  494 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~~Al~~~~~~~-~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~  494 (829)
                      ||+|||||++||++|.++|.++|+.. .....++++++.|+++||+.||||++++++++++|++|+|||++|+++|||.+
T Consensus      1340 VEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l 1419 (1688)
T 2pff_A         1340 ASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKIL 1419 (1688)
T ss_dssp             CCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTC
T ss_pred             EEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Confidence            99999999999999999999999863 33345799999999999999999999999999999999999999999999999


Q ss_pred             C-cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHH
Q psy11396        495 K-LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYA  573 (829)
Q Consensus       495 ~-~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~  573 (829)
                      + ++  .+.++.+.++|+    .+++++||||||||+|+|+||++++.......       ...+-..+++....+++..
T Consensus      1420 ~~~d--~v~~p~~~~~~~----~~r~AlVnSFGFGGtNAhvILe~p~~~~a~l~-------~~~~~~Y~~r~~~R~~~a~ 1486 (1688)
T 2pff_A         1420 EQFE--YVLYPSKTLKTD----GVRAVSITSFGFGQKGGQAIVVHPDYLYGAIT-------EDRYNEYVAKVSAREKSAY 1486 (1688)
T ss_dssp             CSSC--CCCSCTTCCSSS----SSSCCCCCCCCSTTCCCCCCEECSSSCCCSCS-------SSTTHHHHHHHTTTTTTTH
T ss_pred             CcCC--ceeecCccccCC----CCcEEEEeeECCCCeeEEEEEeCCCchhccCC-------HHHHHHHHHHHHHHHHHHH
Confidence            5 33  344577888883    57899999999999999999999775332211       1223345666666666666


Q ss_pred             HHHhhhcccCCc
Q psy11396        574 KLICNYISKDLK  585 (829)
Q Consensus       574 ~~~~~~l~~n~~  585 (829)
                      ..+++.+..|++
T Consensus      1487 ~~~~~~~~~~~l 1498 (1688)
T 2pff_A         1487 KFFHNGMIYNKL 1498 (1688)
T ss_dssp             HHHHHHHHHTCS
T ss_pred             HHHHHHHhCCCc
Confidence            666666666554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=1.1e-60  Score=626.90  Aligned_cols=440  Identities=17%  Similarity=0.221  Sum_probs=379.2

Q ss_pred             CCHHHHHHHHHcCCCc--eeeCCC-CCCcccccCCccccccC--cceeecccccCcccccCCcCCCCCHHHhhcCCHHHH
Q psy11396        130 NNVKKFWNNLLIGRNC--VSKIPS-TRWIIDDFYDSDKNAIG--KTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQR  204 (829)
Q Consensus       130 ~~~~~~w~~l~~G~~~--~~~~~~-~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~fd~~~f~i~p~~~~~~d~~~~  204 (829)
                      .+.++.|+...++.+.  +.+.|. ++|+....+.+....++  ...++.+|+++  +.||+.+|||++++++.|||+++
T Consensus      2572 ~s~~~a~~~~~~~~~~~~i~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~--d~FD~~~fgIs~rea~~mDp~~r 2649 (3089)
T 3zen_D         2572 SSEADARAFVQFDPEHTVARPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIP--TGFDPTVWGISPDMASSIDRVAL 2649 (3089)
T ss_dssp             ECHHHHHHHHTTSTTSEEEEECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHH
T ss_pred             CCHHHHHHHHHhCCCcceEEeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcC--CCCChhhcCCCHHHHHhcCHHHH
Confidence            3578889888776555  455555 78988877776533332  35667788886  46999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCCC----CCCceEEEEccccccccc-------cccCccccchhhhccccccchhhHhhh-hcc
Q psy11396        205 LFLQNCWTCIEDAGYNPFSL----SGSLCGVFVGCAVSDYNK-------LITDPKMYNAYALMGESVSILPARVSY-FLN  272 (829)
Q Consensus       205 l~l~aa~~AL~dAGl~~~~i----~~~~~Gv~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lg  272 (829)
                      |+++++++||+|||++++++    ++.++|||+|++.+++..       +........ ..++....+..++++++ ++|
T Consensus      2650 L~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aa~is~~~lG 2728 (3089)
T 3zen_D         2650 WNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPN-DILQEVLPNVVAAHVMQSYVG 2728 (3089)
T ss_dssp             HHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCT-THHHHTSTTHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccc-hhhccccccHHHHHHHHHHcC
Confidence            99999999999999999876    679999999998765432       112222222 23556677889999986 569


Q ss_pred             CCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----------CCCCCCCCCCC
Q psy11396        273 LQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----------PDGHCYSFDQR  341 (829)
Q Consensus       273 l~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----------~~~~~~pfd~~  341 (829)
                      ++||+++|+++|+||++||++|+++|++|+||++||||+|. .++..+..|..+++++           +++.|+|||.+
T Consensus      2729 l~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~ 2807 (3089)
T 3zen_D         2729 GYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRR 2807 (3089)
T ss_dssp             CCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTT
T ss_pred             CCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccC
Confidence            99999999999999999999999999999999999999999 6888888899888876           58899999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCH-------HHHHHHHHHHHHHcCCCCCCcc
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNT-------KSQIRLQTKIYKKFNINPNDIQ  414 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~-------~~~~~ai~~Al~~Agl~~~dId  414 (829)
                      ++|+++|||||++||+++++|+++|++||++|.|.+.++||.+.+.+.|+.       .++.++|++||+++|++|+|||
T Consensus      2808 ~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DId 2887 (3089)
T 3zen_D         2808 RLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIA 2887 (3089)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEE
T ss_pred             CCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHee
Confidence            999999999999999999999999999999999999999999988888863       3677899999999999999999


Q ss_pred             EEEecCCCCCCCChHHHH---HHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCC
Q psy11396        415 LLEAHGTGTKLGDPIEFE---ALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN  491 (829)
Q Consensus       415 ~ve~hgtgt~~gD~~E~~---Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~  491 (829)
                      |||+|||||++||++|.+   ++.++|+..  ...+++|++.|+++||++||||++++++++++|+|++|||++|+++||
T Consensus      2888 yVEaHGTGT~lgD~~E~~al~al~~~fg~~--~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~n 2965 (3089)
T 3zen_D         2888 VISKHDTSTLANDPNETELHERIADSMGRA--PGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVD 2965 (3089)
T ss_dssp             EEECCCCCCTTHHHHHHHHHHHHHHHTTCC--TTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBC
T ss_pred             EEEEecCCcccccHHHHHHHHHHHHHhCcc--CCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCC
Confidence            999999999999999999   678888742  235699999999999999999999999999999999999999999999


Q ss_pred             ccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHH
Q psy11396        492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLI  571 (829)
Q Consensus       492 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~  571 (829)
                      |+++ ...+++++++.++|+ ....+|+++||||||||+|+|+||++++......       ..+.+..+|+|+.+.|++
T Consensus      2966 p~i~-~~~~~~~~~~~~~w~-~~~~~r~a~vnSfGfGG~NahvVle~~~~~~~~~-------~~~~~~~~~~r~~~r~~~ 3036 (3089)
T 3zen_D         2966 DELA-TSGHFVWVREPLDLR-GKFPLKAGLVTSLGFGHVSGLVALVHPEAFIAAL-------DPSEREDYRTRAEQRMLA 3036 (3089)
T ss_dssp             GGGG-GCSSEEECSSCBCCC-TTSCCCEEEEEEEETTTEEEEEEEECGGGTGGGS-------HHHHHHHHHHHHHHHHHH
T ss_pred             CCcc-ccCCeeecCCCccCC-CCCCCCEEEEccccCCCCeEEEEEecCchhhhcc-------ChHHHHHHHHHHHHHHHH
Confidence            9999 788999999999995 3456899999999999999999999987543221       125667899999999999


Q ss_pred             HHHHHhhhcccCC
Q psy11396        572 YAKLICNYISKDL  584 (829)
Q Consensus       572 ~~~~~~~~l~~n~  584 (829)
                      ...++.+.+..|.
T Consensus      3037 ~~~~~~~~~~~~~ 3049 (3089)
T 3zen_D         3037 GQRRLVSAIAGGR 3049 (3089)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998775

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=100.00  E-value=4.6e-43  Score=368.65  Aligned_cols=227  Identities=16%  Similarity=0.276  Sum_probs=207.0

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEec
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav~  658 (829)
                      +.|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|+.++...........  ....+..+..+||||||+||
T Consensus        20 ~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~   99 (254)
T 3hrx_A           20 KLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVN   99 (254)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEEC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence            3688999999999999999999999999999999999999999988754322211111  11223344559999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|+++++++++||++|+++||+++||||+|+|+
T Consensus       100 G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~  179 (254)
T 3hrx_A          100 GVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPA  179 (254)
T ss_dssp             SEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred             CEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhhcCcccCHHHHHHCCCeEEecCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +++++++.+++++|+..+|.+++.+|++++.....++++.++.|...+...+ .++|++|++++|+|||.
T Consensus       180 ~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~Eg~~AF~eKR~  248 (254)
T 3hrx_A          180 EKLMEEALSLAKELAQGPTRAYALTKKLLLETYRLSLTEALALEAVLQGQAG-QTQDHEEGVRAFREKRP  248 (254)
T ss_dssp             GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999999999999999999999999999 79999999999999874

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=1.3e-42  Score=365.17  Aligned_cols=227  Identities=22%  Similarity=0.365  Sum_probs=206.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-cccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-TDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......... .....+..+..+||||||+|||
T Consensus        25 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  104 (258)
T 4fzw_A           25 ARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNG  104 (258)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCCSCEEEEECS
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHHHhHHHHHHHHHHHCCCCEEEEEcC
Confidence            358899999999999999999999999999999999999999998875422111111 1122334455699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..+++++++||++|+++||+++||||+|+|++
T Consensus       105 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~i~a~eA~~~GLv~~vv~~~  184 (258)
T 4fzw_A          105 YALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSD  184 (258)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred             cceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHHHcCCcCcHHHHHHCCCeeEEeCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|+|||.
T Consensus       185 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~Eg~~AF~eKR~  252 (258)
T 4fzw_A          185 LTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLA-ATEDRHEGISAFLQKRT  252 (258)
T ss_dssp             THHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999999999999999999999 79999999999999874

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=4.9e-42  Score=363.70  Aligned_cols=226  Identities=16%  Similarity=0.202  Sum_probs=200.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc---c----cccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT---D----EKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~---~----~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++...........   .    ...+..+..+|||||
T Consensus        36 ~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvI  115 (274)
T 4fzw_C           36 LNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVI  115 (274)
T ss_dssp             TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEE
Confidence            588999999999999999999999999999999999999999988653322211110   0    112233445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|+.+++++++||++|+++||+++||||+
T Consensus       116 Aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~  195 (274)
T 4fzw_C          116 CAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQ  195 (274)
T ss_dssp             EEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHHHHHHHHCCCEEHHHHHHTTSSSE
T ss_pred             EEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++|++|++++|+|||.
T Consensus       196 vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~Egv~AF~eKR~  268 (274)
T 4fzw_C          196 VVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAG-RSADYREGVSAFLAKRS  268 (274)
T ss_dssp             EECGGGHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHC-CC
T ss_pred             EeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999888 79999999999999874

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=100.00  E-value=1.2e-40  Score=349.65  Aligned_cols=223  Identities=21%  Similarity=0.292  Sum_probs=204.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|++++........ .... .+..+ .+||||||+|||+|
T Consensus        28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~~~~-~~~~~-~~~kPvIAav~G~a  104 (256)
T 3trr_A           28 RNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLS-ERGL-GFTNV-PPRKPIIAAVEGFA  104 (256)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEE-TTEE-TTSSS-CCSSCEEEEECSBC
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhh-hhhh-hHHHh-cCCCCEEEEECCee
Confidence            588999999999999999999999999999999999999999998865322111 1111 12223 79999999999999


Q ss_pred             cchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH
Q psy11396        662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV  741 (829)
Q Consensus       662 ~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l  741 (829)
                      +|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++||+++||||+|+|.+++
T Consensus       105 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l  184 (256)
T 3trr_A          105 LAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKYGFINRLVDDGQA  184 (256)
T ss_dssp             CTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHGGGTCCSEEECTTCH
T ss_pred             eechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCeeEecChHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        742 LFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       742 ~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      .+++.+++++|+..+|.+++.+|++++.....++++.++.|...+...+ .+++++|++++|++||.
T Consensus       185 ~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  250 (256)
T 3trr_A          185 LDTALELAAKITANGPLAVAATKRIIIESASWAPEEAFAKQGEILMPIF-VSEDAKEGAKAFAEKRA  250 (256)
T ss_dssp             HHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999988899999999999999999 79999999999999873

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.4e-40  Score=351.59  Aligned_cols=226  Identities=14%  Similarity=0.204  Sum_probs=206.3

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cc--cccccccccc-ccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SR--FTDEKSYCMP-LYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~--~~~~~~~~~~-~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++....... ..  ......+..+ ..+||||||+|
T Consensus        30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav  109 (265)
T 3swx_A           30 RNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAV  109 (265)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCCTTCCCTTCCSSCCCSSCEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            58899999999999999999999999999999999999999999886543221 11  1112233445 67999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|+|
T Consensus       110 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~  189 (265)
T 3swx_A          110 HGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEIVP  189 (265)
T ss_dssp             CSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEES
T ss_pred             cCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHHHHHHHcCCcCCHHHHHHcCCCCEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||.
T Consensus       190 ~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~  259 (265)
T 3swx_A          190 VGEHVDTAIAIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQLVPTVRELF-TSEDATLGVQAFLSRTT  259 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTCC
T ss_pred             hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999888889999999999999999 79999999999999873

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=100.00  E-value=9.1e-41  Score=352.07  Aligned_cols=227  Identities=19%  Similarity=0.333  Sum_probs=205.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-cccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-RFTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........ .......+..+..+||||||+|||
T Consensus        30 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  109 (263)
T 3moy_A           30 ALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAG  109 (263)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECB
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchhHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            3588899999999999999999999999999999999999999998754221110 001112234455699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|+|++
T Consensus       110 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~  189 (263)
T 3moy_A          110 YALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAA  189 (263)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGG
T ss_pred             EeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++.+++.+++++|+..+|.+++.+|++++.....++++.++.|...+..++ .+++.+|++++|++||.
T Consensus       190 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~AF~ekR~  257 (263)
T 3moy_A          190 DLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMF-DTHDQTEGMTAFLEKRT  257 (263)
T ss_dssp             GHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999888899999999999999999 79999999999999873

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=100.00  E-value=6.9e-41  Score=353.65  Aligned_cols=226  Identities=22%  Similarity=0.352  Sum_probs=205.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cccccccccccccCCCCEEEEecc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|++++........  .......+..+..+||||||+|||
T Consensus        28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  107 (265)
T 3qxz_A           28 RNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSASPVQPAAFELRTPVIAAVNG  107 (265)
T ss_dssp             TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCCCSCCSSSCGGGSSSCEEEEECS
T ss_pred             CCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            589999999999999999999999999999999999999999988764322111  111122334455699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+|+||+++||||+|+|++
T Consensus       108 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~  187 (265)
T 3qxz_A          108 HAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAG  187 (265)
T ss_dssp             EEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCSEEECHH
T ss_pred             EEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCccEeeCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhhCCHHHH--HHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLL-SKKELELQKKYYSHSLQKKLSTI--FLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~-~~~a~~~~K~~l~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++.+++.+++++|+.. +|.+++.+|++++......+++.  ++.|...+..++ .+++++|++++|++||.
T Consensus       188 ~l~~~a~~~a~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~-~s~d~~egi~Af~ekr~  258 (265)
T 3qxz_A          188 KVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSAAEVAARETADHLRLM-GSQDAAEGPRAFIDGRP  258 (265)
T ss_dssp             HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH-TSTHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHcCCC
Confidence            9999999999999999 99999999999999887778888  899999999999 78999999999999874

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=100.00  E-value=4.3e-41  Score=354.09  Aligned_cols=225  Identities=16%  Similarity=0.231  Sum_probs=190.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      +.|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|++++......... .........+..+||||||+|||
T Consensus        31 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G  110 (262)
T 3r9q_A           31 ARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISG  110 (262)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCTTSSCTTSSTTCCCSSCEEEEECS
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHHhhhhHHHHHHHhCCCCEEEEECC
Confidence            35899999999999999999999999999999999999999999987643322111 11112233445699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++||||+|+|++
T Consensus       111 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~  190 (262)
T 3r9q_A          111 HAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARG  190 (262)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred             eeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEecChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++.+++.+++++|+..+|.+++.+|++++.....++++.++.|.. +...+ .+ +.+|++++|++|+.
T Consensus       191 ~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~-~s-d~~Eg~~AF~ekr~  256 (262)
T 3r9q_A          191 QAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFG-SIERV-AT-EALEGAGRFAAGEG  256 (262)
T ss_dssp             CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHT-HHHHH-HC---------------
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH-HHHHh-cc-HHHHHHHHHHcCCC
Confidence            999999999999999999999999999999988899999999998 87888 56 99999999999873

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=100.00  E-value=1.1e-40  Score=353.62  Aligned_cols=227  Identities=21%  Similarity=0.341  Sum_probs=205.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......... ......+..+..+||||||+|||
T Consensus        45 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  124 (278)
T 3h81_A           45 ALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAG  124 (278)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGHHHHTCCSCEEEEECB
T ss_pred             CCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhhHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            35889999999999999999999999999999999999999999987643211100 01111134455699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|+|++
T Consensus       125 ~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~  204 (278)
T 3h81_A          125 YALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPAD  204 (278)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred             eeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCccEEeChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|++||.
T Consensus       205 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~AF~ekR~  272 (278)
T 3h81_A          205 DLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAF-ATEDQSEGMAAFIEKRA  272 (278)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999988899999999999999999 79999999999999863

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=100.00  E-value=2.3e-40  Score=351.89  Aligned_cols=226  Identities=12%  Similarity=0.162  Sum_probs=199.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-------c--cccc-cccccccccccCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-------G--ISRF-TDEKSYCMPLYCK  650 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-------~--~~~~-~~~~~~~~~~~~~  650 (829)
                      +.|++|.+|+.+|.++++.+++|+++|+|||||.|++||+|+|++++.....       .  ...+ .....+..+..+|
T Consensus        31 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  110 (274)
T 3tlf_A           31 ALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMA  110 (274)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CTTCSGGGGSCCCTTCCCTTSCC
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccchhhHHHHHHHHHHHHHHHHhCC
Confidence            3588999999999999999999999999999999999999999998764332       0  0011 1122334455699


Q ss_pred             CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCC--ccCHHHHHH
Q psy11396        651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTAS--EFKGKELKE  728 (829)
Q Consensus       651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~--~~~a~eA~~  728 (829)
                      |||||+|||+|+|||++|+++||+||++++++|++||+++|++| +|++++|++++|..++++++++|+  +|+|+||++
T Consensus       111 kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~~~A~~l~ltg~~~~~~A~eA~~  189 (274)
T 3tlf_A          111 KPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPRSIALRMALMGKHERMSAQRAYE  189 (274)
T ss_dssp             SCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCHHHHHHHHHHGGGCCEEHHHHHH
T ss_pred             CCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCHHHHHHHHHcCCCCccCHHHHHH
Confidence            99999999999999999999999999999999999999999999 999999999999999999999999  999999999


Q ss_pred             cCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        729 RGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       729 ~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +||||+|+|++++++++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||.
T Consensus       190 ~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  268 (274)
T 3tlf_A          190 LGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLHEAEILAETFRERVL-RTEDAAEGPRAFVEKRQ  268 (274)
T ss_dssp             HTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             CCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999988899999999999999999 79999999999999863

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=100.00  E-value=1.6e-40  Score=353.49  Aligned_cols=227  Identities=18%  Similarity=0.220  Sum_probs=195.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc---cccccccccc---cCCCCEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF---TDEKSYCMPL---YCKIPVI  654 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~---~~~~~~~~~~---~~~kp~I  654 (829)
                      ..|++|.+|+.+|.++++.+++|+++|+|||+|.|+.||+|+|++++..........   .....+..+.   .+|||||
T Consensus        40 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvI  119 (278)
T 4f47_A           40 RRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLI  119 (278)
T ss_dssp             GTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC----------------------CTTCBTTTTBSCCCSSCEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence            358999999999999999999999999999999999999999998876433221111   1112233344   7999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++||+++||||+
T Consensus       120 Aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~  199 (278)
T 4f47_A          120 AAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGH  199 (278)
T ss_dssp             EEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSE
T ss_pred             EEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|.+++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|++||.
T Consensus       200 vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~Af~ekr~  272 (278)
T 4f47_A          200 VVPDGQALTKALEIAEIIAANGPLAVQAILRTIRETEGMHENEAFKIDTRIGIEVF-LSDDAKEGPQAFAQKRK  272 (278)
T ss_dssp             EECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHGGGG-GSSHHHHHHHHHHTTSC
T ss_pred             eeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999988899999999999999999 78899999999999873

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=2.4e-41  Score=355.71  Aligned_cols=225  Identities=15%  Similarity=0.172  Sum_probs=169.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc----cccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF----TDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~----~~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|++++..........    .....+..+..+||||||+|
T Consensus        27 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  106 (256)
T 3qmj_A           27 LNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAV  106 (256)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHHCCSCEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            48999999999999999999999999999999999999999999886543322110    11122333445999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|
T Consensus       107 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~  186 (256)
T 3qmj_A          107 NGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRICS  186 (256)
T ss_dssp             CSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHTSSSEEEC
T ss_pred             CCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|++||
T Consensus       187 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr  255 (256)
T 3qmj_A          187 PEELLPEARRHAEILAAKPISSLMAVKHTMVEPNRAQIAAASARENAHFAELM-GAQANAAALADFTDRR  255 (256)
T ss_dssp             GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHCC-------------------------------------
T ss_pred             HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHccC
Confidence            99999999999999999999999999999999888889999999999999988 7999999999999987

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=100.00  E-value=1.4e-40  Score=351.48  Aligned_cols=227  Identities=15%  Similarity=0.245  Sum_probs=203.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccc-ccc-ccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRF-TDE-KSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~-~~~-~~~~~~~~~~kp~Iaav  657 (829)
                      ..|++|.+|+.+|.++++.+++|+++|+|||||.| +.||+|+|++++.......... ... ........+||||||+|
T Consensus        29 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav  108 (267)
T 3r9t_A           29 ARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHFIDKPTIAAV  108 (267)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTCGGGCGGGTTTCCCSSCEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHHHhHHHHHHHHHhCCCCEEEEE
Confidence            46889999999999999999999999999999999 5999999999886533221111 010 01112236999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|
T Consensus       109 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~  188 (267)
T 3r9t_A          109 NGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVE  188 (267)
T ss_dssp             CSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHHTSSSEEEC
T ss_pred             CCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEEcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHH---HHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKY---YSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~---l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++++++.+++++|+..+|.+++.+|++   ++......+++.++.|...+..++ .+++++|++++|++||.
T Consensus       189 ~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~AF~ekR~  261 (267)
T 3r9t_A          189 AGSVLDAALALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALL-KSEDAKEGPRAFAEKRE  261 (267)
T ss_dssp             TTCHHHHHHHHHHHHHTSCHHHHHHHHHHHTTEETTEEGGGHHHHHHHHHHHHHHT-TSSHHHHHHHHHHTTSC
T ss_pred             hhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999   888777788999999999999999 79999999999999873

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-40  Score=351.30  Aligned_cols=227  Identities=21%  Similarity=0.306  Sum_probs=205.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc-c--ccccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS-R--FTDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~-~--~~~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.| +.||+|+|++++........ .  ......+..+..+||||||+
T Consensus        29 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  108 (265)
T 3kqf_A           29 QANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAA  108 (265)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            45889999999999999999999999999999998 99999999988754211100 0  00112233455599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|+
T Consensus       109 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv  188 (265)
T 3kqf_A          109 INGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVV  188 (265)
T ss_dssp             ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred             ECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++.+++.+++++|+..+|.+++.+|++++.....++++.++.|...+..++ .+++++|++++|++||.
T Consensus       189 ~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  259 (265)
T 3kqf_A          189 PVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVI-HTKDRLEGLQAFKEKRT  259 (265)
T ss_dssp             CGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHTTSC
T ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999988899999999999999999 79999999999999873

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=100.00  E-value=1e-40  Score=352.40  Aligned_cols=225  Identities=15%  Similarity=0.204  Sum_probs=201.6

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc------cccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF------TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~------~~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..........      .....+..+..+||||||
T Consensus        25 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA  104 (268)
T 3i47_A           25 HNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIA  104 (268)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            58899999999999999999999999999999999999999999876532211100      011223344559999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|+++++ +|++++|..++++++++|++|+|+||+++||||+|
T Consensus       105 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~A~~llltg~~i~A~eA~~~GLV~~v  183 (268)
T 3i47_A          105 MVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQHC  183 (268)
T ss_dssp             EECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEE
T ss_pred             EECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEe
Confidence            99999999999999999999999999999999999999999887 79999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHH-HHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLST-IFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|++++++++.+++++|+..+|.+++.+|++++......+++ .++.|...+...+ .+++.+|++++|+|||.
T Consensus       184 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~-~s~d~~eg~~AF~ekR~  256 (268)
T 3i47_A          184 VPDDTLLEFTLKYASQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHKR-VSDEGQEGLKAFLNKEI  256 (268)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHTCC
T ss_pred             eChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999988777777 6788888888888 79999999999999883

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=100.00  E-value=6.2e-41  Score=353.21  Aligned_cols=225  Identities=19%  Similarity=0.335  Sum_probs=204.1

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cccc--cccccccccCCCCEEEEec
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFTD--EKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~~~--~~~~~~~~~~~kp~Iaav~  658 (829)
                      |++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........  .+..  ...+..+..+||||||+||
T Consensus        27 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~  106 (261)
T 3pea_A           27 NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIH  106 (261)
T ss_dssp             TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence            88999999999999999999999999999999999999999988754321100  0000  1123345569999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|+
T Consensus       107 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~  186 (261)
T 3pea_A          107 GAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAE  186 (261)
T ss_dssp             SEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred             CeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||.
T Consensus       187 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  255 (261)
T 3pea_A          187 ETFLDDTLKVAKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVF-TSEDGREGVAAFLEKRK  255 (261)
T ss_dssp             GGHHHHHHHHHHHHHTSCHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH-HSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999998887778999999999999999 79999999999999873

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=100.00  E-value=1.3e-40  Score=349.47  Aligned_cols=223  Identities=15%  Similarity=0.216  Sum_probs=201.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||+|.|+.||+|+|++++...   .........+..+..+||||||+|||+|
T Consensus        27 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~l~~~~kPvIAav~G~a  103 (255)
T 3p5m_A           27 LNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA---GAADAANRVVRAITSLPKPVIAGVHGAA  103 (255)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH---HHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch---HHHHHHHHHHHHHHhCCCCEEEEeCCee
Confidence            4889999999999999999999999999999999999999999887521   0000111223344559999999999999


Q ss_pred             cchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH
Q psy11396        662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV  741 (829)
Q Consensus       662 ~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l  741 (829)
                      +|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|+|++++
T Consensus       104 ~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l  183 (255)
T 3p5m_A          104 VGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEY  183 (255)
T ss_dssp             ETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEECCTTCH
T ss_pred             hhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        742 LFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       742 ~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||.
T Consensus       184 ~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  249 (255)
T 3p5m_A          184 ESVLTDVLRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALV-ETADFREGARAFRERRT  249 (255)
T ss_dssp             HHHHHHHHHHHHTSCHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999888889999999999999999 79999999999999873

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=2.5e-40  Score=349.13  Aligned_cols=224  Identities=19%  Similarity=0.278  Sum_probs=198.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccccccc-ccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKS-YCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|.|+.++.........  .... +..+.. ||||||+|||
T Consensus        35 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~--~~~~~~~~~~~-~kPvIAav~G  111 (265)
T 3qxi_A           35 AKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVE--GRGLGFTERPP-AKPLIAAVEG  111 (265)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEET--TTEETTTTSCC-SSCEEEEECS
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhh--hhhhhHHHhhC-CCCEEEEECC
Confidence            35889999999999999999999999999999999999999999987643321111  1111 222333 9999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|++
T Consensus       112 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  191 (265)
T 3qxi_A          112 YALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAERAHALGMVNVLAEPG  191 (265)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred             ceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCccEeeChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||.
T Consensus       192 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  259 (265)
T 3qxi_A          192 AALDAAIALAEKITANGPLAVAATKRIITESRGWSLDTRFAQQMKILFPIF-TSNDAKEGAIAFAEKRP  259 (265)
T ss_dssp             CHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCTTTHHHHHHHHHHHHH-HCHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999888889999999999999999 68999999999999873

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=100.00  E-value=1.8e-40  Score=353.33  Aligned_cols=226  Identities=15%  Similarity=0.221  Sum_probs=205.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc---c----ccccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF---T----DEKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~---~----~~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++..........   .    ....+..+..+|||||
T Consensus        38 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  117 (279)
T 3g64_A           38 LNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVI  117 (279)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            48899999999999999999999999999999999999999999876543321110   0    0122334455999999


Q ss_pred             EEecccccchhhhhhhccccccccccceecccccccccc-CCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT-PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~-p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++ |++|++++|++++|..++++++++|+.|+++||+++||||
T Consensus       118 Aav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~  197 (279)
T 3g64_A          118 AALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDTVRAPEAERIGLIS  197 (279)
T ss_dssp             EEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCS
T ss_pred             EEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCC
Confidence            999999999999999999999999999999999999999 9999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|+|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||.
T Consensus       198 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~  271 (279)
T 3g64_A          198 ELTEEGRADEAARTLARRLADGPALAHAQTKALLTAELDMPLAAAVELDASTQALLM-TGEDYAEFHAAFTEKRP  271 (279)
T ss_dssp             EECCTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHTTSC
T ss_pred             EecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999988899999999999999999 79999999999999873

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=100.00  E-value=5.4e-40  Score=346.07  Aligned_cols=226  Identities=20%  Similarity=0.295  Sum_probs=204.0

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-cccccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-RFTDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++........ .......+..+..+||||||+|||
T Consensus        27 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  106 (260)
T 1mj3_A           27 ALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNG  106 (260)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECS
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            4688999999999999999999999999999999999999999988643111000 000112234455699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|+.|+++||+++||||+|+|++
T Consensus       107 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  186 (260)
T 1mj3_A          107 YALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVE  186 (260)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred             EEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEEeChH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ++.+++.+++++|+..+|.+++.+|++++.....++++.++.|...+...+ .+++++|++++|++||
T Consensus       187 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~egi~af~~kr  253 (260)
T 1mj3_A          187 TLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTF-ATDDRREGMSAFVEKR  253 (260)
T ss_dssp             THHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGG-GSHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999888889999999999998888 6899999999999986

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=100.00  E-value=1.6e-40  Score=350.80  Aligned_cols=223  Identities=19%  Similarity=0.318  Sum_probs=197.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhh---hhhccccc--ccccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLL---KIQKGISR--FTDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~---~~~~~~~~--~~~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.   ........  ......+..+..+||||||+
T Consensus        26 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  105 (266)
T 3fdu_A           26 KNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIA  105 (266)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHHHHHCCSCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence            58899999999999999999999999999999999999999999886   22211100  01112223344599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+|+||+++||||+|+
T Consensus       106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~i~A~eA~~~GLv~~vv  185 (266)
T 3fdu_A          106 VKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIV  185 (266)
T ss_dssp             ECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHHHHHHTTSCSEEC
T ss_pred             ECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |  ++.+++.+++++|+..+|.+++.+|++++... ..+++.++.|...+...+ .+++++|++++|++||.
T Consensus       186 ~--~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~-~~l~~~l~~e~~~~~~~~-~s~d~~eg~~aF~ekR~  253 (266)
T 3fdu_A          186 E--DAYATAQATAQHLTALPLASLKQTKALMKHDL-DQIIECIDHEAEIFMQRV-QSPEMLEAVQAFMQKRQ  253 (266)
T ss_dssp             S--CHHHHHHHHHHHHHTSCHHHHHHHHHHHTTTH-HHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHC----
T ss_pred             H--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            8  89999999999999999999999999999865 468889999999999999 79999999999999874

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=100.00  E-value=3.3e-40  Score=350.52  Aligned_cols=229  Identities=16%  Similarity=0.252  Sum_probs=186.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cccc----ccc--ccc-ccccccCCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GISR----FTD--EKS-YCMPLYCKIP  652 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~~~----~~~--~~~-~~~~~~~~kp  652 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++..... ....    +..  ... +..+..+|||
T Consensus        29 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP  108 (276)
T 2j5i_A           29 KRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKP  108 (276)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHHHHHTTTTTTCSSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            3689999999999999999999999999999999999999999988743211 1110    000  011 3445569999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      |||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+|+||+++|||
T Consensus       109 vIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv  188 (276)
T 2j5i_A          109 TIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLV  188 (276)
T ss_dssp             EEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSS
T ss_pred             EEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhh--hcCCh-HHHHHHHHHHhhccc
Q psy11396        733 MPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYT--FVNNP-SVITNIERYFDKSIK  809 (829)
Q Consensus       733 ~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~--~~~~~-~~~e~~~~~~~k~~~  809 (829)
                      |+|+|++++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...  + .++ +.+|++++|++||.+
T Consensus       189 ~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~s~~d~~eg~~AF~ekr~r  267 (276)
T 2j5i_A          189 NESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCRELTWEQNEDYLYAKLDQSRLL-DTEGGREQGMKQFLDDKSI  267 (276)
T ss_dssp             SEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH-C------------------
T ss_pred             cEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc-CChHHHHHHHHHHHhcccC
Confidence            999999999999999999999999999999999999988888888888887766554  4 577 999999999998843


Q ss_pred             c
Q psy11396        810 K  810 (829)
Q Consensus       810 ~  810 (829)
                      |
T Consensus       268 ~  268 (276)
T 2j5i_A          268 K  268 (276)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=100.00  E-value=4e-40  Score=346.88  Aligned_cols=226  Identities=22%  Similarity=0.309  Sum_probs=204.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-cccccccccccCCCCEEEEecc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-TDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.........+ .....+..+..+||||||+|||
T Consensus        25 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  104 (258)
T 2pbp_A           25 VLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNG  104 (258)
T ss_dssp             GTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCCSCEEEEECS
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence            358899999999999999999999999999999999999999998875321100000 0012233445699999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|+.|+++||+++||||+|+|++
T Consensus       105 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  184 (258)
T 2pbp_A          105 LALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVSPE  184 (258)
T ss_dssp             EEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECGG
T ss_pred             EEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceeeChH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ++.+++.+++++|+..+|.+++.+|++++.....++++.++.|...+...+ .+++++|++++|++||
T Consensus       185 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr  251 (258)
T 2pbp_A          185 LLMEETMRLAGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFERKNFYLLF-ASEDQKEGMAAFLEKR  251 (258)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHccC
Confidence            999999999999999999999999999999888899999999999999888 7999999999999986

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=100.00  E-value=5.5e-40  Score=347.00  Aligned_cols=224  Identities=17%  Similarity=0.174  Sum_probs=198.6

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-c-cc-ccccc-c--cCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-D-EK-SYCMP-L--YCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-~-~~-~~~~~-~--~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++ ...... ...+. . .. .+..+ .  .+||||||
T Consensus        30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~kPvIA  107 (265)
T 3rsi_A           30 RNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGWMVR-DGSAPPLDPATIGKGLLLSHTLTKPLIA  107 (265)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC----------------CCCHHHHHHHTTSSCCCSSCEEE
T ss_pred             ccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-cccccc-hHHHHHHhHHHHHHHHHHhcCCCCCEEE
Confidence            58899999999999999999999999999999999999999998 221111 00111 1 11 23334 5  79999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++||||+|
T Consensus       108 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~v  187 (265)
T 3rsi_A          108 AVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHV  187 (265)
T ss_dssp             EECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEE
T ss_pred             EECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++.....++++.++.|...+...+ .+++++|++++|++||.
T Consensus       188 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~  259 (265)
T 3rsi_A          188 VPAGTALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAIEARLTRPVI-TSADAREGLAAFKEKRE  259 (265)
T ss_dssp             ESTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHHTSC
T ss_pred             cChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999988899999999999999999 79999999999999863

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.1e-40  Score=347.53  Aligned_cols=222  Identities=14%  Similarity=0.141  Sum_probs=174.5

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-ccc--ccccccccc-ccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SRF--TDEKSYCMP-LYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~~--~~~~~~~~~-~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++....... ..+  .....+..+ ..+||||||+|
T Consensus        33 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav  112 (258)
T 3lao_A           33 RNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAV  112 (258)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            48899999999999999999999999999999999999999999886543221 111  112234455 67999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++||||+|+|
T Consensus       113 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~  192 (258)
T 3lao_A          113 QGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEFDADEALRMRLLTEVVE  192 (258)
T ss_dssp             CSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEEC
T ss_pred             CCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCcEeeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF  804 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  804 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|+
T Consensus       193 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~AF~  258 (258)
T 3lao_A          193 PGEELARALEYAERIARAAPLAVRAALQSAFQGRDEGDDAALSRVNESLAALI-GSEDVREGVLAMV  258 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--------------------------------
T ss_pred             hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHhhC
Confidence            99999999999999999999999999999999888889999999999999988 7899999999985

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=100.00  E-value=1.1e-40  Score=357.03  Aligned_cols=227  Identities=19%  Similarity=0.287  Sum_probs=167.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhh---hhcc-----c-cccc--ccccccccccC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLK---IQKG-----I-SRFT--DEKSYCMPLYC  649 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~---~~~~-----~-~~~~--~~~~~~~~~~~  649 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|+.++..   ....     . ....  ....+..+..+
T Consensus        50 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  129 (298)
T 3qre_A           50 RLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTML  129 (298)
T ss_dssp             GTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-----------------------------CCTTGGGGS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccccccccccchhHHHHHHHHHHHHHHHHhC
Confidence            3589999999999999999999999999999999999999999988754   1111     0 1101  12233445569


Q ss_pred             CCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHc
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKER  729 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~  729 (829)
                      ||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|+.++++++++|++|+|+||+++
T Consensus       130 ~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltg~~i~A~eA~~~  209 (298)
T 3qre_A          130 RKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQL  209 (298)
T ss_dssp             SSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHT
T ss_pred             CCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccChhhHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        730 GISMPVLPRKQVLFYSLKLAKKLSLL-SKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       730 GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ||||+|+|++++.+++.+++++|+.. +|.+++.+|++++......+++.+..|...+...+ .+++++|++++|+|||.
T Consensus       210 GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~Egv~AF~ekR~  288 (298)
T 3qre_A          210 GLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKRQVYGDATRDVVEATSHAEVLLREAM-PRPDVIEGIVSFLEKRP  288 (298)
T ss_dssp             TSCSEEECGGGHHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGGC-----------------------------------
T ss_pred             CCCeEecCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999998 99999999999999988888889888888888888 68999999999999874

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=100.00  E-value=2.7e-40  Score=353.25  Aligned_cols=227  Identities=19%  Similarity=0.256  Sum_probs=198.4

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--------c--ccccccccccccCCC
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--------R--FTDEKSYCMPLYCKI  651 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~k  651 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++........        .  ......+..+..+||
T Consensus        45 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k  124 (290)
T 3sll_A           45 MNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQ  124 (290)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHHHHHhCCC
Confidence            588999999999999999999999999999999999999999988754322110        0  001122333445999


Q ss_pred             CEEEEecccccchhhhhhhccccccccccceeccccccccccCC-CcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396        652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG-AGSTLIFPQRFGKILSREILFTASEFKGKELKERG  730 (829)
Q Consensus       652 p~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~-~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G  730 (829)
                      ||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +|++++|++++|..++++++++|++|+|+||+++|
T Consensus       125 PvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~G  204 (290)
T 3sll_A          125 PVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRDVDADEAERIG  204 (290)
T ss_dssp             CEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHT
T ss_pred             CEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCC
Confidence            99999999999999999999999999999999999999999998 99999999999999999999999999999999999


Q ss_pred             CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |||+|+|++++.+++.+++++|+..+|.+++.+|++++.... ..+++.++.|...+..++..+++++|++++|++||.
T Consensus       205 LV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~  283 (290)
T 3sll_A          205 LVSRKVASESLLEECYAIGERIAGFSRPGIELTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRP  283 (290)
T ss_dssp             SSSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSC
T ss_pred             CccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999988 889999999999888887347899999999999874

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=100.00  E-value=2.5e-40  Score=348.26  Aligned_cols=227  Identities=19%  Similarity=0.306  Sum_probs=200.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cccccccccccccCCCCEEEEec
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFTDEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~~~~~~~~~~~~~~kp~Iaav~  658 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........  .......+..+..+||||||+||
T Consensus        23 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~  102 (257)
T 2ej5_A           23 QLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVN  102 (257)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEEC
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence            3588999999999999999999999999999999999999999988753221000  00011223334459999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++||+++||||+|+|+
T Consensus       103 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~  182 (257)
T 2ej5_A          103 GAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPL  182 (257)
T ss_dssp             SEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCSEEECG
T ss_pred             ccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCcceecCh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +++.+++.+++++|+..+|.+++.+|++++.....++++.++.|...+...+ .+++.+|++++|++||.
T Consensus       183 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr~  251 (257)
T 2ej5_A          183 SDWEEEVKQFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAG-LTSDHREGVKAFFEKRK  251 (257)
T ss_dssp             GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-HSHHHHHHHHHHTTTCC
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CChHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999888889999999999998888 68999999999999863

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.7e-40  Score=351.46  Aligned_cols=225  Identities=18%  Similarity=0.259  Sum_probs=202.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---ccccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---FTDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~kp~Iaav  657 (829)
                      +.|++|.+|+.+|.++++.+  ++++|+|||||.|+.||+|+|++++.........   ......+..+..+||||||+|
T Consensus        36 ~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  113 (275)
T 3hin_A           36 KRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAAL  113 (275)
T ss_dssp             GTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            35889999999999999999  5799999999999999999999887532111000   001122334556999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+.++++++++|++|+|+||+++||||+|+|
T Consensus       114 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~i~A~eA~~~GLv~~vv~  193 (275)
T 3hin_A          114 KGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIE  193 (275)
T ss_dssp             CSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEES
T ss_pred             CCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCCEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|++||.
T Consensus       194 ~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~AF~ekR~  263 (275)
T 3hin_A          194 NGSAYDKALELGNRVAQNAPLTNFAVLQALPMIAEANPQTGLLMESLMATVAQ-SDQEAKTRIRAFLDHKT  263 (275)
T ss_dssp             SSCHHHHHHHHHHHHTTSCHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999988899999999999998888 78999999999999984

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.3e-40  Score=349.73  Aligned_cols=223  Identities=19%  Similarity=0.309  Sum_probs=202.3

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-----cccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-----TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-----~~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..........     .....+..+..+||||||+
T Consensus        49 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  128 (276)
T 3rrv_A           49 LNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAA  128 (276)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            58899999999999999999999999999999999999999999876532221100     0112233445599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+|+||+++||||+|+
T Consensus       129 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLv~~vv  208 (276)
T 3rrv_A          129 VNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVA  208 (276)
T ss_dssp             ECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred             ECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                        +++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|+|||
T Consensus       209 --~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~AF~ekR  276 (276)
T 3rrv_A          209 --DDPVAEAIACAKKILELPQQAVESTKRVLNIHLERAVLASLDYALSAESQSF-VTEDFRSIVTKLADKN  276 (276)
T ss_dssp             --SSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSHHHHHHHHHHHCCC
T ss_pred             --HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCC
Confidence              8999999999999999999999999999998887778999999999998888 7999999999999986

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=100.00  E-value=2.2e-40  Score=349.47  Aligned_cols=229  Identities=16%  Similarity=0.211  Sum_probs=201.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCee-eccCChhhhhhhh--ccccc---c--cccccccccccCCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYF-ACGGTKEGLLKIQ--KGISR---F--TDEKSYCMPLYCKIP  652 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F-~~G~D~~~~~~~~--~~~~~---~--~~~~~~~~~~~~~kp  652 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.| |+|+|++++....  .....   +  .....+..+..+|||
T Consensus        24 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP  103 (263)
T 3lke_A           24 KKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKV  103 (263)
T ss_dssp             GTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            35889999999999999999999999999999999988 9999999886511  11100   0  011223345559999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      |||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++|||
T Consensus       104 vIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv  183 (263)
T 3lke_A          104 TVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGLI  183 (263)
T ss_dssp             EEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSS
T ss_pred             EEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccC-hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcccc
Q psy11396        733 MPVLP-RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKK  810 (829)
Q Consensus       733 ~~v~~-~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~  810 (829)
                      |+|+| ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|+|++.+.
T Consensus       184 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~e~~~~~~~~~~~~  261 (263)
T 3lke_A          184 QEICENKQELQERVKNYLKAVSEGYVPAIAATKKLLKGKAAEELKQQLEQETEELVALF-KQTEIKKRLEALVEGHHHH  261 (263)
T ss_dssp             SEEESSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT-TSHHHHHHHHHC-------
T ss_pred             cEecCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh-cCHHHHHHHHhhhccCCCC
Confidence            99999 99999999999999999999999999999999888789999999999999999 8999999999999998543

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=100.00  E-value=2.7e-40  Score=350.40  Aligned_cols=227  Identities=17%  Similarity=0.241  Sum_probs=203.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhh-----ccc-ccc--cccccccccccCCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ-----KGI-SRF--TDEKSYCMPLYCKIP  652 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~-----~~~-~~~--~~~~~~~~~~~~~kp  652 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++....     ... ..+  .....+..+..+|||
T Consensus        23 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP  102 (269)
T 1nzy_A           23 HRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRP  102 (269)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            368899999999999999999999999999999999999999998864321     000 000  011223334459999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      |||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++|||
T Consensus       103 vIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv  182 (269)
T 1nzy_A          103 VLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLV  182 (269)
T ss_dssp             EEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHTSC
T ss_pred             EEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        733 MPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       733 ~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+|+|++++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .+++++|++++|++||.
T Consensus       183 ~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~egi~af~ekr~  257 (269)
T 1nzy_A          183 SRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASV-THPHFMPCLTRFLDGHR  257 (269)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-HSTTHHHHHHHHHTTCC
T ss_pred             cEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999888889999999999998888 68899999999999864

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}

Probab=100.00  E-value=3.2e-40  Score=351.55  Aligned_cols=224  Identities=17%  Similarity=0.193  Sum_probs=199.3

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhh------ccccc-c-cccccccccccCCCC
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQ------KGISR-F-TDEKSYCMPLYCKIP  652 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~------~~~~~-~-~~~~~~~~~~~~~kp  652 (829)
                      .|++|.+|+.+|.++++.+++|+++|+|||||.| ++||+|+|++++....      ..... . .....+..+..+|||
T Consensus        29 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP  108 (287)
T 3gkb_A           29 VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIRHQPQV  108 (287)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHHHHHHHCSSE
T ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHHhCCCC
Confidence            4889999999999999999999999999999997 7999999998875322      11111 0 011122334459999


Q ss_pred             EEEEecccccchhhhhhhccccccccc-cceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCC
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSE-ESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI  731 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~-~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GL  731 (829)
                      |||+|||+|+|||++|+++||+||+++ +++|++||+++|++|++|++++|++++|+.+++++++||++|+|+||+++||
T Consensus       109 vIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GL  188 (287)
T 3gkb_A          109 TIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGW  188 (287)
T ss_dssp             EEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTS
T ss_pred             EEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCC
Confidence            999999999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             cccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccc
Q psy11396        732 SMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIK  809 (829)
Q Consensus       732 v~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~  809 (829)
                      ||+|+|++++.+++.+++++|+..+|.+++.+|++++..   ...+.++.|...+...+ .+++++|++++|++|+.+
T Consensus       189 V~~vv~~~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~---~~~~~l~~e~~~~~~~~-~s~d~~eg~~AF~ekr~~  262 (287)
T 3gkb_A          189 INRALPADELDEYVDRVARNIAALPDGVIEAAKRSLPAD---DLKEGLLGENDAWAATF-SLPAAQQLISGGLKDGAQ  262 (287)
T ss_dssp             SSEEECHHHHHHHHHHHHHHHHTSCTTHHHHHHHHSCCC---CCHHHHHHHHHHHHHHH-TSHHHHHHHHHHHHTTTT
T ss_pred             CcEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999874   34588899999999988 799999999999999853

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=100.00  E-value=6.3e-40  Score=346.73  Aligned_cols=226  Identities=18%  Similarity=0.234  Sum_probs=203.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeC-CCCeeeccCChhhhhhhhcccccc--cc-cccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACGGTKEGLLKIQKGISRF--TD-EKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g-~g~~F~~G~D~~~~~~~~~~~~~~--~~-~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+| .|+.||+|+|++++.........+  .. ...+..+..+||||||+
T Consensus        28 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  107 (265)
T 2ppy_A           28 KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIAC  107 (265)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468999999999999999999999999999999 899999999998875411000000  01 12233444599999999


Q ss_pred             ecccccchhhhhhhccccccccccc-eeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEES-VYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a-~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      |||+|+|||++|+++||+||+++++ +|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|
T Consensus       108 v~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~v  187 (265)
T 2ppy_A          108 LEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGETITPQEALEIGLVNRV  187 (265)
T ss_dssp             ECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSSSEE
T ss_pred             ECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHCCCccee
Confidence            9999999999999999999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .+++.+|++++|++||
T Consensus       188 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~egi~af~ekr  258 (265)
T 2ppy_A          188 FPQAETRERTREYARKLANSATYAVSNIKLAIMNGKEMPLNVAIRYEGELQNLLF-RSEDAKEGLSAFLEKR  258 (265)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTS
T ss_pred             cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999888889999999999999888 7999999999999986

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=100.00  E-value=1.8e-39  Score=345.30  Aligned_cols=225  Identities=19%  Similarity=0.297  Sum_probs=202.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc---c------cc-----ccccccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI---S------RF-----TDEKSYCMP  646 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~---~------~~-----~~~~~~~~~  646 (829)
                      +.|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|++++.......   .      ..     .....+..+
T Consensus        24 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  103 (275)
T 1dci_A           24 KRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVI  103 (275)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999999998875431100   0      00     001122334


Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCH-HHHHHHHhcCCccCHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK-ILSREILFTASEFKGKE  725 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~-~~a~e~ll~g~~~~a~e  725 (829)
                      ..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|. .+++++++||++|+++|
T Consensus       104 ~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~~A~~l~ltg~~~~a~e  183 (275)
T 1dci_A          104 EKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADE  183 (275)
T ss_dssp             HHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHH
T ss_pred             HhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCcHHHHHHHHHcCCCCCHHH
Confidence            45999999999999999999999999999999999999999999999999999999999999 99999999999999999


Q ss_pred             HHHcCCcccccCh-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396        726 LKERGISMPVLPR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF  804 (829)
Q Consensus       726 A~~~GLv~~v~~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  804 (829)
                      |+++||||+|+|+ +++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .+++++|++++|+
T Consensus       184 A~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~af~  262 (275)
T 1dci_A          184 ALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSML-QTQDIIKSVQAAM  262 (275)
T ss_dssp             HHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHT-SSHHHHHHHHHHH
T ss_pred             HHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Confidence            9999999999998 9999999999999999999999999999999888889999999999888888 7999999999999


Q ss_pred             hh
Q psy11396        805 DK  806 (829)
Q Consensus       805 ~k  806 (829)
                      +|
T Consensus       263 ek  264 (275)
T 1dci_A          263 EK  264 (275)
T ss_dssp             TT
T ss_pred             hc
Confidence            98

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=100.00  E-value=2.3e-40  Score=353.32  Aligned_cols=235  Identities=20%  Similarity=0.285  Sum_probs=197.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-----ccc--cccccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-----SRF--TDEKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+. |+|||||.|+.||+|+|++++.......     ..+  .....+..+..+|||||
T Consensus        45 ~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  123 (291)
T 2fbm_A           45 KNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIV  123 (291)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccchhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            588999999999999999998875 9999999999999999998875321100     000  01122233445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+++++++||++|+|+||+++||||+
T Consensus       124 AaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~el~ltg~~i~A~eA~~~GLV~~  203 (291)
T 2fbm_A          124 VSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQ  203 (291)
T ss_dssp             EEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTSCCEEEHHHHHHTTSCSE
T ss_pred             EEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHHHHHHHHHcCCccCHHHHHHCCCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHH-Hhhcc-ccCC
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERY-FDKSI-KKNN  812 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~-~~k~~-~~~~  812 (829)
                      |+|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++.+|++.+| ++||. +.++
T Consensus       204 vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~eg~~Af~~ekR~P~f~~  282 (291)
T 2fbm_A          204 VFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIW-SSAQGIESMLKIPLLGYKAAFPP  282 (291)
T ss_dssp             EECSTTSHHHHHHHHHHHTTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-TSHHHHHHHHTC-----------
T ss_pred             ecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999999999999999999998777778899999999998888 799999999999 99875 2334


Q ss_pred             Cccccc
Q psy11396        813 SKIIND  818 (829)
Q Consensus       813 ~k~~~~  818 (829)
                      +|+=|+
T Consensus       283 ~~~~~~  288 (291)
T 2fbm_A          283 RKTQND  288 (291)
T ss_dssp             ------
T ss_pred             CCcccc
Confidence            444443

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=100.00  E-value=1e-39  Score=347.81  Aligned_cols=225  Identities=13%  Similarity=0.225  Sum_probs=203.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cc--cccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RF--TDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~--~~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++........  .+  .....+..+..+||||||+|
T Consensus        47 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  126 (286)
T 3myb_A           47 FNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARV  126 (286)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            488999999999999999999999999999999999999999998764111000  00  01122333445999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++ +++++++|++++|..++++++++|++|+|+||+++||||+|+|
T Consensus       127 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~  205 (286)
T 3myb_A          127 HGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVA  205 (286)
T ss_dssp             CSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEEC
T ss_pred             CCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCCcEecC
Confidence            999999999999999999999999999999999999 7788999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|++||.
T Consensus       206 ~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~egi~aFlekr~  275 (286)
T 3myb_A          206 PKALDDEIEAMVSKIVAKPRAAVAMGKALFYRQIETDIESAYADAGTTMACNM-MDPSALEGVSAFLEKRR  275 (286)
T ss_dssp             GGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH-HSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHccCC
Confidence            99999999999999999999999999999999988899999999999999999 79999999999999874

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=100.00  E-value=6e-40  Score=344.72  Aligned_cols=225  Identities=17%  Similarity=0.269  Sum_probs=202.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhh---hcc-cccc-c-ccccccccccCCCCEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKI---QKG-ISRF-T-DEKSYCMPLYCKIPVI  654 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~---~~~-~~~~-~-~~~~~~~~~~~~kp~I  654 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++...   ... .... . ....+..+..+|||||
T Consensus        19 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI   98 (253)
T 1uiy_A           19 RRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTV   98 (253)
T ss_dssp             GTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHHHHHHHHHHHHHhCCCCEE
Confidence            36899999999999999999999999999999999999999999887543   111 0000 0 1122233445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|++| +++|++++|..++++++++|+.|+++||+++||||+
T Consensus        99 Aav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~  177 (253)
T 1uiy_A           99 AAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNR  177 (253)
T ss_dssp             EEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSCSE
T ss_pred             EEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHHHhCCccCHHHHHHCCCcce
Confidence            9999999999999999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |+|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||
T Consensus       178 vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~af~~kr  249 (253)
T 1uiy_A          178 IAPPGKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVR-ETGDLAEGIRAFFEKR  249 (253)
T ss_dssp             EECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGG-GCHHHHHHHHHHHTTS
T ss_pred             ecChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhCcC
Confidence            99999999999999999999999999999999999888889999999999998888 7999999999999975

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3

Probab=100.00  E-value=7.6e-40  Score=345.73  Aligned_cols=223  Identities=19%  Similarity=0.303  Sum_probs=200.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhh-hcc-c--ccc--cccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKI-QKG-I--SRF--TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~-~~~-~--~~~--~~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++ +... ... .  ..+  .....+..+..+||||||
T Consensus        31 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA  109 (264)
T 1wz8_A           31 LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVA  109 (264)
T ss_dssp             GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            48899999999999999999999999999999999999999998 6432 101 0  000  011223344559999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|
T Consensus       110 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~v  189 (264)
T 1wz8_A          110 AVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALA  189 (264)
T ss_dssp             EECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHHHHHHTSSSEE
T ss_pred             EECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++..... +++.+..|...+...+ .+++.+|++++|++||
T Consensus       190 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr  259 (264)
T 1wz8_A          190 VEDEKVYEKALEVAERLAQGPKEALHHTKHALNHWYRS-FLPHFELSLALEFLGF-SGKELEEGLKALKEKR  259 (264)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHGG-GSHHHHHHHHHHHTTS
T ss_pred             cChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-cChHHHHHHHHHHccC
Confidence            99999999999999999999999999999999988877 8889999998888888 7899999999999986

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=347.20  Aligned_cols=224  Identities=21%  Similarity=0.268  Sum_probs=201.5

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--ccc--cccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRF--TDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~~--~~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.......  ..+  .....+..+..+||||||+|
T Consensus        54 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  133 (287)
T 2vx2_A           54 RNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMV  133 (287)
T ss_dssp             TTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            68899999999999999999999999999999999999999998764321100  000  01122334456999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|++|+++ |++++|..++++++++|++|+|+||+++||||+|+|
T Consensus       134 ~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~  212 (287)
T 2vx2_A          134 NGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVP  212 (287)
T ss_dssp             CSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEEC
T ss_pred             CCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHHHHhCCCCCHHHHHHCCCcceecC
Confidence            9999999999999999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++.+|++++|++||
T Consensus       213 ~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~egi~af~ekr  281 (287)
T 2vx2_A          213 EAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNL-ALRDGQEGITAFLQKR  281 (287)
T ss_dssp             GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999888889999999999999888 7999999999999986

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=100.00  E-value=1e-39  Score=342.19  Aligned_cols=222  Identities=18%  Similarity=0.237  Sum_probs=184.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++.....      .......+..+||||||+|||+
T Consensus        29 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~------~~~~~~~l~~~~kPvIAav~G~  102 (256)
T 3pe8_A           29 SRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTTE------LPDISPKWPDMTKPVIGAINGA  102 (256)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC---------------CCCCCCCSSCEEEEECSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhHH------HHHHHHHHHhCCCCEEEEECCe
Confidence            3588999999999999999999999999999999999999999988754311      1112244556999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|.++
T Consensus       103 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~  182 (256)
T 3pe8_A          103 AVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDD  182 (256)
T ss_dssp             EETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSCEECGGG
T ss_pred             eechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHCCCCeEEeCHhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhh--cCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTF--VNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~~e~~~~~~~k~~  808 (829)
                      +.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+  ...++.+|++.+|++|++
T Consensus       183 l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k  252 (256)
T 3pe8_A          183 LLTAARRVAASIVGNNQKAVRALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGR  252 (256)
T ss_dssp             HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccC
Confidence            99999999999999999999999999999888888999999988866543  256678999999999874

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=100.00  E-value=1.7e-39  Score=338.53  Aligned_cols=221  Identities=38%  Similarity=0.723  Sum_probs=200.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........  .....+..+..+||||||+|||+
T Consensus        23 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~--~~~~~~~~l~~~~kPvIAav~G~  100 (243)
T 2q35_A           23 SRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEV--EVLDLSGLILDCEIPIIAAMQGH  100 (243)
T ss_dssp             GTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCC--CCCCCHHHHHTCCSCEEEEECSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhh--HHHHHHHHHHhCCCCEEEEEcCc
Confidence            3688999999999999999999999999999999999999999988754322111  11222334455999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|+++
T Consensus       101 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~  180 (243)
T 2q35_A          101 SFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQD  180 (243)
T ss_dssp             EETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTCSSCEECHHH
T ss_pred             cccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCEecChhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF  804 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  804 (829)
                      +.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|+
T Consensus       181 l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~a~~  243 (243)
T 2q35_A          181 VLNYAQQLGQKIAKSPRLSLVALKQHLSADIKAKFPEAIKKELEIHQVTF-NQPEIASRIQQEF  243 (243)
T ss_dssp             HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSTTHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh-CCHHHHHHHhhcC
Confidence            99999999999999999999999999998877778888999998888888 6889999998864

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}

Probab=100.00  E-value=3.1e-39  Score=342.46  Aligned_cols=225  Identities=17%  Similarity=0.208  Sum_probs=195.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCC-eeeccCChhhhhhhhccc-ccc-c--ccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYEN-YFACGGTKEGLLKIQKGI-SRF-T--DEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~-~F~~G~D~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+ +||+|+|++++....... ... .  .......+..+||||||
T Consensus        33 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA  112 (273)
T 2uzf_A           33 VRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIA  112 (273)
T ss_dssp             GTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSSSCCCTHHHHHHHHHHSSSCEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhhHHHhhHHHHHHHHHhCCCCEEE
Confidence            468899999999999999999999999999999998 999999998875311110 000 0  01122334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|+.|+|+||+++||||+|
T Consensus       113 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v  192 (273)
T 2uzf_A          113 MVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTV  192 (273)
T ss_dssp             EECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHHHHHTCCCEEHHHHHHHTSSSEE
T ss_pred             EECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHH-HHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHEL-TMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|.+++.+++.+++++|+..+|.+++.+|++++  ....+++.++.|. ..+...+ .+++++|++++|++||.
T Consensus       193 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~--~~~~~~~~l~~e~~~~~~~~~-~s~d~~egi~af~ekr~  263 (273)
T 2uzf_A          193 VPLEKVEDETVQWCKEIMKHSPTALRFLKAAMN--ADTDGLAGLQQMAGDATLLYY-TTDEAKEGRDAFKEKRD  263 (273)
T ss_dssp             ECGGGSHHHHHHHHHHHTTSCHHHHHHHHHHHH--HHHSHHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHh-cChHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999998  3346788888888 7787777 79999999999999864

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=100.00  E-value=2.7e-39  Score=342.32  Aligned_cols=222  Identities=14%  Similarity=0.183  Sum_probs=195.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--------cccccccccccccCCCCE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--------RFTDEKSYCMPLYCKIPV  653 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--------~~~~~~~~~~~~~~~kp~  653 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........        .......+..+..+||||
T Consensus        32 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  111 (267)
T 3oc7_A           32 RNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPV  111 (267)
T ss_dssp             TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHHHHHHHHHCSSCE
T ss_pred             cCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHHHHHhCCCCE
Confidence            488999999999999999999999999999999999999999988751111110        000112233344599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+ ++|..++++++++|++|+++||+++||||
T Consensus       112 IAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~~~A~~l~ltg~~~~a~eA~~~GLv~  190 (267)
T 3oc7_A          112 IAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSARAAARYYLTGEKFDARRAEEIGLIT  190 (267)
T ss_dssp             EEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCHHHHHHHHHHCCCBCHHHHHHHTSSS
T ss_pred             EEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCHHHHHHHHHcCCccCHHHHHHCCChh
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|  .+++++++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .+++++|++++|++||
T Consensus       191 ~v--~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr  261 (267)
T 3oc7_A          191 MA--AEDLDAAIDQLVTDVGRGSPQGLAASKALTTAAVLERFDRDAERLAEESARLF-VSDEAREGMLAFLEKR  261 (267)
T ss_dssp             EE--CSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHHTC
T ss_pred             hh--hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCC
Confidence            99  78899999999999999999999999999999888889999999999999999 7999999999999987

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=100.00  E-value=1.7e-39  Score=342.70  Aligned_cols=226  Identities=15%  Similarity=0.164  Sum_probs=199.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeC-CC-CeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITG-YE-NYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g-~g-~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaa  656 (829)
                      +.|++|.+|+.+|.++++.++.|+ +|+||||| .| +.||+|+|++++..........  .....+..+..+||||||+
T Consensus        24 ~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  102 (261)
T 1ef8_A           24 KLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM  102 (261)
T ss_dssp             GTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            368899999999999999999999 99999999 88 9999999998865422111110  0112223344599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|+.|+++||+++||||+|+
T Consensus       103 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv  182 (261)
T 1ef8_A          103 VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVV  182 (261)
T ss_dssp             ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEE
T ss_pred             ECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHH--hhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHD--YTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+.  ..+ .+++++|++++|++||.
T Consensus       183 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~s~d~~eg~~af~ekr~  255 (261)
T 1ef8_A          183 EVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVY-DSEDYQEGMNAFLEKRK  255 (261)
T ss_dssp             CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhh-cCHHHHHHHHHHHccCC
Confidence            999999999999999999999999999999998887778888888888888  777 79999999999999863

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A

Probab=100.00  E-value=9.1e-40  Score=346.15  Aligned_cols=224  Identities=18%  Similarity=0.302  Sum_probs=192.5

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---c--cccccccccccCCCCEEEEe
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---F--TDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~--~~~~~~~~~~~~~kp~Iaav  657 (829)
                      |++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.........   .  .....+..+..+||||||+|
T Consensus        35 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  114 (272)
T 3qk8_A           35 NSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAI  114 (272)
T ss_dssp             HEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            778999999999999999999999999999999999999999987543221100   0  01122344556999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+|+||+++||||+|+|
T Consensus       115 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~  194 (272)
T 3qk8_A          115 RGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCVD  194 (272)
T ss_dssp             CSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEEC
T ss_pred             CCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEeeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      .+++++++.+++++|+..+|.+++.+|++++..... ....++.+.......+ .+++++|++++|++||.
T Consensus       195 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~~~~~e~~~~-~s~d~~eg~~Af~ekR~  263 (272)
T 3qk8_A          195 DDEVLPTATRLAENLAQGAQNAIRWTKRSLNHWYRM-FGPTFETSLGLEFLGF-TGPDVQEGLAAHRQKRP  263 (272)
T ss_dssp             GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH-THHHHHHHHHHHHHHT-TSSHHHHHHHHHHTTSC
T ss_pred             HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999976541 1222333333334556 78999999999999874

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=100.00  E-value=5.9e-40  Score=344.14  Aligned_cols=225  Identities=16%  Similarity=0.261  Sum_probs=184.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeC-CCCeeeccCChhhhhhhhccc--ccc--cccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACGGTKEGLLKIQKGI--SRF--TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g-~g~~F~~G~D~~~~~~~~~~~--~~~--~~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+| .|+.||+|+|++++.......  ..+  .....+..+..+||||||
T Consensus        20 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA   99 (250)
T 2a7k_A           20 KHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIA   99 (250)
T ss_dssp             TTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            368999999999999999999999999999999 899999999998875421100  000  011223345569999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|++|++ +|++++|.+++++++++|++|+++||+++||||+|
T Consensus       100 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~v  178 (250)
T 2a7k_A          100 AVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQV  178 (250)
T ss_dssp             EECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHHHHCCCBCHHHHHHHTCCSEE
T ss_pred             EECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHHHcCCcccHHHHHHcCCccee
Confidence            99999999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||
T Consensus       179 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekr  249 (250)
T 2a7k_A          179 VESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKAVHKAAF-QARDAQGHFKNVLGKK  249 (250)
T ss_dssp             ECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred             cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999998877778888999998888888 6899999999999986

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A

Probab=100.00  E-value=4.3e-40  Score=346.83  Aligned_cols=229  Identities=13%  Similarity=0.173  Sum_probs=196.5

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhcc-cccc--cccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKG-ISRF--TDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~-~~~~--~~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|. |++||+|+|+.++...... ...+  .....+..+..+||||||+|
T Consensus        25 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  104 (260)
T 1sg4_A           25 VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAI  104 (260)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            478899999999999999999999999999999 7999999999886431100 0000  01122334556999999999


Q ss_pred             cccccchhhhhhhcccccccc--ccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFS--EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~--~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      ||+|+|||++|+++|||||++  ++++|++||+++|++|++|++++|++++|..++++++++|+.|+++||+++||||+|
T Consensus       105 ~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~~~a~eA~~~GLv~~v  184 (260)
T 1sg4_A          105 NGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQV  184 (260)
T ss_dssp             CEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCHHHHHHHTSSSEE
T ss_pred             CCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCCCEe
Confidence            999999999999999999999  899999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccC
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKN  811 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~  811 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||..++
T Consensus       185 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~~~~  259 (260)
T 1sg4_A          185 VPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFI-SKDSIQKSLQMYLERLKEEK  259 (260)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH-TSHHHHHHHTC---------
T ss_pred             cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHhhcccC
Confidence            9999999999999999999999999999999998877677888888988888888 79999999999999986443

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}

Probab=100.00  E-value=3.1e-39  Score=342.40  Aligned_cols=225  Identities=17%  Similarity=0.183  Sum_probs=190.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeC-----CC-CeeeccCChhhhhhhhccc-c-c--ccccccccccccCCC
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITG-----YE-NYFACGGTKEGLLKIQKGI-S-R--FTDEKSYCMPLYCKI  651 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g-----~g-~~F~~G~D~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~k  651 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||     .| +.||+|+|++++....... . .  ......+..+..+||
T Consensus        31 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k  110 (275)
T 4eml_A           31 RNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPK  110 (275)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC--------------CCCHHHHHHHHHHSSS
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccccchhhHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999     88 5999999998875421110 0 0  011112233445999


Q ss_pred             CEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCC
Q psy11396        652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI  731 (829)
Q Consensus       652 p~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GL  731 (829)
                      ||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++|+|+||+++||
T Consensus       111 PvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GL  190 (275)
T 4eml_A          111 VVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGM  190 (275)
T ss_dssp             EEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTS
T ss_pred             CEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcCHHHHHHcCC
Confidence            99999999999999999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             cccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        732 SMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       732 v~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ||+|+|++++.+++.+++++|+..+|.+++.+|++++.... ......+.+...+...+ .+++.+|++++|+|||.
T Consensus       191 v~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~~~~~~~~~~-~s~d~~eg~~AF~ekR~  265 (275)
T 4eml_A          191 VNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADCD-GQAGLQELAGNATLLYY-MTEEGSEGKQAFLEKRP  265 (275)
T ss_dssp             CSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             ccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHh-cCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999998653 23333445666666667 79999999999999984

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=100.00  E-value=1.2e-39  Score=346.76  Aligned_cols=225  Identities=16%  Similarity=0.257  Sum_probs=190.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cc----c--cccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SR----F--TDEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~----~--~~~~~~~~~~~~~kp~  653 (829)
                      +.|++|.+|+.+|.++++.++.|+++ +|||||.|+.||+|+|++++....... ..    .  .....+..+..+||||
T Consensus        46 ~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  124 (280)
T 2f6q_A           46 KKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPL  124 (280)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCE
T ss_pred             cCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHHHHHHHHHHHHHHHcCCCCE
Confidence            36889999999999999999999999 999999999999999998875321110 00    0  0112233445699999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+|+||+++||||
T Consensus       125 IAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~  204 (280)
T 2f6q_A          125 IAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVT  204 (280)
T ss_dssp             EEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCS
T ss_pred             EEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|+|++++.+++.+++++|+..+|.+++.+|+.++......+++.+..|...+...+ .+++.+|++++|++||
T Consensus       205 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~eg~~af~ekR  277 (280)
T 2f6q_A          205 EVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRW-LSDECTNAVVNFLSRK  277 (280)
T ss_dssp             EEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHH-TSHHHHC---------
T ss_pred             eEECHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHccC
Confidence            999999999999999999999999999999999998877778889999999998888 7999999999999987

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=100.00  E-value=1.2e-39  Score=343.72  Aligned_cols=224  Identities=19%  Similarity=0.309  Sum_probs=200.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-----cccc--cccccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-----ISRF--TDEKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+ +|+|||+|.|+.||+|+|++++......     ...+  .....+..+..+|||||
T Consensus        27 ~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  105 (261)
T 2gtr_A           27 NNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPII  105 (261)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            58899999999999999999887 4999999999999999999887542110     0000  01122233445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+++++++||++|+++||+++||||+
T Consensus       106 Aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~  185 (261)
T 2gtr_A          106 VAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQ  185 (261)
T ss_dssp             EEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSE
T ss_pred             EEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |+|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++||
T Consensus       186 vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr  257 (261)
T 2gtr_A          186 VFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIW-GSAQGMDSMLKYLQRK  257 (261)
T ss_dssp             EECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HSTTTTHHHHHHHHHH
T ss_pred             ccChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHccC
Confidence            99999999999999999999999999999999998877778888999998888888 6889999999999986

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=100.00  E-value=4e-39  Score=343.37  Aligned_cols=222  Identities=17%  Similarity=0.204  Sum_probs=199.2

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCC-eeeccCChhhhhhhhcccc-----c-ccccccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYEN-YFACGGTKEGLLKIQKGIS-----R-FTDEKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~-~F~~G~D~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+ +||+|+|++++........     . ......+..+..+|||||
T Consensus        28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI  107 (289)
T 3h0u_A           28 MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTI  107 (289)
T ss_dssp             TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHHHHHTCSSEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhHHHHHHHHHHHHHHHHhCCCCEE
Confidence            48899999999999999999999999999999986 5556669988764322111     0 011122334456999999


Q ss_pred             EEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      |+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++||||
T Consensus       108 AaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~  187 (289)
T 3h0u_A          108 AKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAERYGWVN  187 (289)
T ss_dssp             EEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSS
T ss_pred             EEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcc
Confidence            99999999999999999999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD  805 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~  805 (829)
                      +|+|++++.+++.+++++|+..+|.+++.+|++++.... .+++.++.|...+..++ .+++++|++++|++
T Consensus       188 ~vv~~~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~-~s~d~~egi~AFle  257 (289)
T 3h0u_A          188 RAVPDAELDEFVAGIAARMSGFPRDALIAAKSAINAISL-PAPAEVRADAALFQQLV-RGEKVQQRTAELFK  257 (289)
T ss_dssp             EEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHS-CCHHHHHHHHHHHHHHT-TSHHHHHHHHHHHH
T ss_pred             EecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhC
Confidence            999999999999999999999999999999999998877 78999999999999999 79999999999999

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A

Probab=100.00  E-value=4.1e-39  Score=343.32  Aligned_cols=225  Identities=17%  Similarity=0.199  Sum_probs=190.4

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccc-----ccccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISR-----FTDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.........     ......+..+..+||||||
T Consensus        49 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA  128 (289)
T 3t89_A           49 RNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVA  128 (289)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------------CTHHHHHHHHHHCSSCEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchhhhHHHHHHHHHHHHHHHcCCCCEEE
Confidence            5889999999999999999999999999999999 599999999887432111000     0011122334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|+.|+|+||+++||||+|
T Consensus       129 aV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~v  208 (289)
T 3t89_A          129 MVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTV  208 (289)
T ss_dssp             EECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEE
T ss_pred             EECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHHHHHHHHHcCCcccHHHHHHCCCceEe
Confidence            99999999999999999999999999999999999988888889999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++.... ......+.|...+...+ .+++++|++++|+|||.
T Consensus       209 v~~~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~-~s~d~~Eg~~AF~ekR~  279 (289)
T 3t89_A          209 VPLADLEKETVRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFY-MTEEGQEGRNAFNQKRQ  279 (289)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHT-TSSTTTHHHHHHHTTSC
T ss_pred             eCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999997653 23333445666666677 78999999999999984

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-38  Score=348.19  Aligned_cols=225  Identities=14%  Similarity=0.223  Sum_probs=196.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccc------cccccccccccCCCCEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRF------TDEKSYCMPLYCKIPVI  654 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~------~~~~~~~~~~~~~kp~I  654 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..........      ........+..+|||||
T Consensus        30 ~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI  109 (353)
T 4hdt_A           30 INSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAEARRFWFDEYRLNAHIGRYPKPYV  109 (353)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHCSSCEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCCCEE
Confidence            5788999999999999999999999999999998 7999999999876433221110      01122334445999999


Q ss_pred             EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396        655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP  734 (829)
Q Consensus       655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~  734 (829)
                      |+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++| .+++++++||++|+|+||+++||||+
T Consensus       110 Aav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~  188 (353)
T 4hdt_A          110 SIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KLGLHAALTGAPFSGADAIVMGFADH  188 (353)
T ss_dssp             EEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-THHHHHHHHCCCBCHHHHHHHTSCSE
T ss_pred             EEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HHHHHHHhcCCCCCHHHHHHcCCCcE
Confidence            99999999999999999999999999999999999999999999999999988 69999999999999999999999999


Q ss_pred             ccChhhHHHHHHHH-------------------------------------------------------HHHHhcCCHHH
Q psy11396        735 VLPRKQVLFYSLKL-------------------------------------------------------AKKLSLLSKKE  759 (829)
Q Consensus       735 v~~~~~l~~~~~~~-------------------------------------------------------a~~i~~~~~~a  759 (829)
                      |||+++|++.++++                                                       ++.|++.+|.+
T Consensus       189 vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~~L~~~~~~~a~~~a~~la~~sP~a  268 (353)
T 4hdt_A          189 YVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIAALRAHDAPAAGEAADLIATRSPIA  268 (353)
T ss_dssp             ECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHHHHHHHCSHHHHHHHHHHTTSCHHH
T ss_pred             EeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHHHHHhcccHHHHHHHHHHHhcCcHH
Confidence            99999999888766                                                       45588999999


Q ss_pred             HHHHHHHHHhhhhC-CHHHHHHHHHHHHHhhhcCChHHHHHHHHHH--hhcc
Q psy11396        760 LELQKKYYSHSLQK-KLSTIFLHELTMHDYTFVNNPSVITNIERYF--DKSI  808 (829)
Q Consensus       760 ~~~~K~~l~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~--~k~~  808 (829)
                      ++.+|+++++.... ++++.++.|...+..++ .++|++|++++|+  |||.
T Consensus       269 ~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~-~s~D~~EGvrAfl~dekR~  319 (353)
T 4hdt_A          269 LSVTLESVRRAAKLQSLEDTLRQEYRVSCASL-KSHDLVEGIRAQLVDKDRN  319 (353)
T ss_dssp             HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHC----C
T ss_pred             HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHh-CCchHHHHHhhhhhCcCCC
Confidence            99999999988764 79999999999999999 7999999999998  6664

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=100.00  E-value=7.9e-39  Score=337.52  Aligned_cols=221  Identities=16%  Similarity=0.199  Sum_probs=190.9

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-cc----ccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FT----DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~----~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.| ++|+|||||.|+.||+|+|++++......... ..    ....+..+..+||||||+
T Consensus        28 ~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  106 (267)
T 3hp0_A           28 NNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISH  106 (267)
T ss_dssp             TTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHHHHSSSEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5899999999999999999986 69999999999999999999988653211111 00    111223344599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++| +++|++++|..+++++++||++|+|+||+++||||+|+
T Consensus       107 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~A~ellltg~~i~A~eA~~~GLV~~vv  185 (267)
T 3hp0_A          107 VRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQKAHYMTLMTKPISVQEASEWGLIDAFD  185 (267)
T ss_dssp             ECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSSSCBC
T ss_pred             ECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceec
Confidence            99999999999999999999999999999999999999875 67899999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |+.+  +.+.+++++|+..+|.+++.+|++++... ..+++.++.|...+...+ .+++++|++++|+|||+
T Consensus       186 ~~~~--~~~~~~a~~la~~~p~a~~~~K~~l~~~~-~~~~~~~~~e~~~~~~~~-~s~d~~Eg~~AF~ekr~  253 (267)
T 3hp0_A          186 AESD--VLLRKHLLRLRRLNKKGIAHYKQFMSSLD-HQVSRAKATALTANQDMF-SDPQNQMGIIRYVETGQ  253 (267)
T ss_dssp             SCTT--HHHHHHHHHHTTSCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHT-TSTTHHHHHHHHTTSCC
T ss_pred             CCHH--HHHHHHHHHHHhCCHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHh-CCHHHHHHHHHHHhcCC
Confidence            8643  34789999999999999999999999864 346777778888888888 79999999999999984

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=100.00  E-value=3e-39  Score=340.72  Aligned_cols=225  Identities=15%  Similarity=0.143  Sum_probs=187.1

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc---cccc----c--cccccccccccCCCCE
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK---GISR----F--TDEKSYCMPLYCKIPV  653 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~---~~~~----~--~~~~~~~~~~~~~kp~  653 (829)
                      |++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.....   ....    +  .....+..+..+||||
T Consensus        28 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  107 (263)
T 3l3s_A           28 HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPT  107 (263)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHHHTCSSCE
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            89999999999999999999999999999999999999999988754310   0000    0  0112233455699999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++| ++++++|++++|+.++++++++|++|+|+||+++||||
T Consensus       108 IAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~-~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~  186 (263)
T 3l3s_A          108 IALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFC-TTPAVAVSRVIGRRAVTEMALTGATYDADWALAAGLIN  186 (263)
T ss_dssp             EEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSCC-HHHHHHHHTTSCHHHHHHHHHHCCEEEHHHHHHHTSSS
T ss_pred             EEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCCC-ccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCcc
Confidence            99999999999999999999999999999999999999994 67889999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIK  809 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~  809 (829)
                      +|+|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|.++..+
T Consensus       187 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~Eg~~Af~~~~~~  261 (263)
T 3l3s_A          187 RILPEAALATHVADLAGALAARNQAPLRRGLETLNRHLELPLEQAYALATPVMVEHF-MDPGRRHLDWIDEGHHHH  261 (263)
T ss_dssp             EECCHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-C-----------------
T ss_pred             EEeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHhhccCcc
Confidence            999999999999999999999999999999999999988899999999999999999 799999999999987644

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A

Probab=100.00  E-value=2.4e-39  Score=350.36  Aligned_cols=225  Identities=16%  Similarity=0.213  Sum_probs=169.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCC-------eeeccCChhhhhhhhc----c--------cccc--ccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYEN-------YFACGGTKEGLLKIQK----G--------ISRF--TDE  640 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~-------~F~~G~D~~~~~~~~~----~--------~~~~--~~~  640 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||||.|+       +||+|+|+.++.....    .        ....  ...
T Consensus        78 ~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (334)
T 3t8b_A           78 RNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHIL  157 (334)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC----------------------CCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccccccchhhhHHHHHHHHHH
Confidence            58899999999999999999999999999999986       8999999987642111    0        0000  001


Q ss_pred             ccccccccCCCCEEEEecccccchhhhhhhcccccccc-ccceeccccccccccCCCcceeccccccCHHHHHHHHhcCC
Q psy11396        641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFS-EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTAS  719 (829)
Q Consensus       641 ~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~-~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~  719 (829)
                      ..+..+..+||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|+++++++|+|++|..+|++++++|+
T Consensus       158 ~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~vG~~~A~ellltG~  237 (334)
T 3t8b_A          158 EVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGR  237 (334)
T ss_dssp             HHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHHHhhHHHHHHHHHhCC
Confidence            11223445999999999999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHH
Q psy11396        720 EFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITN  799 (829)
Q Consensus       720 ~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~  799 (829)
                      .|+|+||+++||||+|||.++|++++.+++++|+..+|.+++.+|++++.... .+......|...+...+ .+++.+|+
T Consensus       238 ~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~-~s~d~~Eg  315 (334)
T 3t8b_A          238 TYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDD-GLVGQQLFAGEATRLAY-MTDEAVEG  315 (334)
T ss_dssp             EEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCC-CC------------------------
T ss_pred             cCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHh-cCHHHHHH
Confidence            99999999999999999999999999999999999999999999999998754 34444555666666666 78999999


Q ss_pred             HHHHHhhcc
Q psy11396        800 IERYFDKSI  808 (829)
Q Consensus       800 ~~~~~~k~~  808 (829)
                      +.+|+|||.
T Consensus       316 ~~AFleKR~  324 (334)
T 3t8b_A          316 RDAFLQKRP  324 (334)
T ss_dssp             ---------
T ss_pred             HHHHHcCCC
Confidence            999999984

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=100.00  E-value=1.1e-38  Score=338.01  Aligned_cols=227  Identities=22%  Similarity=0.301  Sum_probs=200.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc--cccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF--TDEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~--~~~~~~~~~~~~~kp~Iaa  656 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|+.++....... ..+  .....+..+..+||||||+
T Consensus        32 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  111 (272)
T 1hzd_A           32 GKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAA  111 (272)
T ss_dssp             GTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            36889999999999999999999999999999998 7999999998864321100 000  0112233445699999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++||+++||||+|+
T Consensus       112 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv  191 (272)
T 1hzd_A          112 IDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVL  191 (272)
T ss_dssp             ESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEE
T ss_pred             eCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCcceec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        737 PRKQV----LFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       737 ~~~~l----~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      |++++    .+.+.+++++|+..+|.+++.+|++++.....++++.+..|...+...+ .+++++|++++|++||.
T Consensus       192 ~~~~l~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~egi~af~ekr~  266 (272)
T 1hzd_A          192 EQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTI-PTKDRLEGLLAFKEKRP  266 (272)
T ss_dssp             CCCTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTT-TCHHHHHHHHHHTTTSC
T ss_pred             ChhhhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcCCC
Confidence            98774    5578899999999999999999999999888889999999999988888 79999999999998874

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-38  Score=333.90  Aligned_cols=218  Identities=18%  Similarity=0.249  Sum_probs=186.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      +.|++|.+|+.+|.++++++++| ++|+|||||.|+.||+|+|+.........  .......+..+..+||||||+|||+
T Consensus        41 ~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~~~~~--~~~~~~~~~~l~~~~kPvIAav~G~  117 (264)
T 3he2_A           41 RRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFAADY--PDRLIELHKAMDASPMPVVGAINGP  117 (264)
T ss_dssp             GTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTGGGH--HHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchhhHHH--HHHHHHHHHHHHhCCCCEEEEECCc
Confidence            35889999999999999999988 99999999999999999999732111000  0001122333445999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++||||+|++   
T Consensus       118 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~v~~---  194 (264)
T 3he2_A          118 AIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT---  194 (264)
T ss_dssp             EETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECC---
T ss_pred             EEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHHcCCCccHHHHHHCCCeEEEec---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999996   


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                       .+++.+++++|+..+|.+++.+|++++...  .+++.++.|...+..++ .+++.+|++.+|+|||.
T Consensus       195 -~~~a~~~A~~la~~~p~a~~~~K~~l~~~~--~~~~~~~~e~~~~~~~~-~s~d~~Eg~~AF~ekR~  258 (264)
T 3he2_A          195 -LADAQAWAAEIARLAPLAIQHAKRVLNDDG--AIEEAWPAHKELFDKAW-GSQDVIEAQVARMEKRP  258 (264)
T ss_dssp             -HHHHHHHHHHHHTSCHHHHHHHHHHHHTSS--CSCCCCHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             -HHHHHHHHHHHHcCCHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcCCC
Confidence             367899999999999999999999999762  34556677778888888 79999999999999884

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=100.00  E-value=4.6e-38  Score=332.87  Aligned_cols=211  Identities=16%  Similarity=0.204  Sum_probs=190.9

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-cc--cccccccccccCCCCEEEEecc
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-RF--TDEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~~--~~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      |++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++........ .+  .....+..+..+||||||+|||
T Consensus        45 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  124 (277)
T 4di1_A           45 NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTG  124 (277)
T ss_dssp             TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred             CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            89999999999999999999999999999999999999999998764311100 00  0112233445599999999999


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+|+||+++||||+|+|++
T Consensus       125 ~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~  204 (277)
T 4di1_A          125 YALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGLIDDMVAPD  204 (277)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred             eEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCCh
Q psy11396        740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNP  794 (829)
Q Consensus       740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~  794 (829)
                      ++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+..++ .++
T Consensus       205 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~  258 (277)
T 4di1_A          205 DVYDSAVAWARRYLECPPRALAAAKAVINDVFELEATERAAAERRRYVELF-AAG  258 (277)
T ss_dssp             GHHHHHHHHHHTTTTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTT-SGG
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCc
Confidence            999999999999999999999999999999988899999999999999998 454

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=100.00  E-value=1.7e-37  Score=333.66  Aligned_cols=228  Identities=16%  Similarity=0.248  Sum_probs=198.8

Q ss_pred             CCcccccccccccchhhhcc-----cccceeeeeeCCCCeeeccCChhhhhhhhcccc--cc-cc----ccc---ccccc
Q psy11396        583 DLKNSTVVKGITDAFSYINS-----SVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RF-TD----EKS---YCMPL  647 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~-----d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~-~~----~~~---~~~~~  647 (829)
                      |++|.+|+.+|.++++.++.     |+++|+|||+|.|++||+|+|++++........  .. ..    ...   +..++
T Consensus        58 pal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  137 (305)
T 3m6n_A           58 ACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGL  137 (305)
T ss_dssp             CSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTGG
T ss_pred             CCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            37899999999999999987     489999999999999999999998764321100  00 00    001   11123


Q ss_pred             cCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+|+||+
T Consensus       138 ~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~  217 (305)
T 3m6n_A          138 GARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLL  217 (305)
T ss_dssp             GTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHHHHHHCCEEEHHHHH
T ss_pred             CCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcHHHHHHHHHcCCCCCHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      ++||||+|+|++++++++.+++++|+. +|.+++.+|++++......+++.++.|...+..++...+..+..|.+++..+
T Consensus       218 ~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q  296 (305)
T 3m6n_A          218 GMGLVDRVVPRGQGVAAVEQVIRESKR-TPHAWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQ  296 (305)
T ss_dssp             HHTSCSEEECTTCHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             HCCCCCEecChhHHHHHHHHHHHHHhh-ChHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence            999999999999999999999999986 8999999999999999999999999999999999977777788888888776


Q ss_pred             cccC
Q psy11396        808 IKKN  811 (829)
Q Consensus       808 ~~~~  811 (829)
                      .++.
T Consensus       297 ~~~~  300 (305)
T 3m6n_A          297 SRRS  300 (305)
T ss_dssp             C---
T ss_pred             hhcc
Confidence            5443

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=340.16  Aligned_cols=224  Identities=17%  Similarity=0.301  Sum_probs=197.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccc----c-c-ccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISR----F-T-DEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~kp~  653 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.| +.||+|+|++++.........    + . ....+..+..+||||
T Consensus        26 ~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  105 (363)
T 3bpt_A           26 FLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPY  105 (363)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTCSSCE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            36889999999999999999999999999999997 999999999987543211110    0 0 011223345599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. +++++++||++|+|+||+++||||
T Consensus       106 IAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~a~~l~ltg~~i~A~eA~~~GLv~  184 (363)
T 3bpt_A          106 VALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-LGYFLALTGFRLKGRDVYRAGIAT  184 (363)
T ss_dssp             EEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-HHHHHHHHCCCEETHHHHHTTSCS
T ss_pred             EEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-HHHHHHHcCCCCCHHHHHHCCCcc
Confidence            9999999999999999999999999999999999999999999999999999998 999999999999999999999999


Q ss_pred             cccChhhHHHHH---------------------------------------------------H---------------H
Q psy11396        734 PVLPRKQVLFYS---------------------------------------------------L---------------K  747 (829)
Q Consensus       734 ~v~~~~~l~~~~---------------------------------------------------~---------------~  747 (829)
                      +|+|++++.+.+                                                   .               +
T Consensus       185 ~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~ei~~al~~~~~~~a~~  264 (363)
T 3bpt_A          185 HFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALE  264 (363)
T ss_dssp             EECCGGGHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHHTTSSSHHHHHHHHHHHCCHHHHH
T ss_pred             eecCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHHhCCCCHHHHHHHHhccChHHHHH
Confidence            999998886532                                                   2               5


Q ss_pred             HHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH-hh
Q psy11396        748 LAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF-DK  806 (829)
Q Consensus       748 ~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~-~k  806 (829)
                      ++++|++.+|.+++.+|++++.....++++.++.|...+..++ .+++++|++++|+ +|
T Consensus       265 ~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~-~s~D~~EGv~Afl~eK  323 (363)
T 3bpt_A          265 QLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACM-RGHDFHEGVRAVLIDK  323 (363)
T ss_dssp             HHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-TSSHHHHHHHHHTTSC
T ss_pred             HHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-cCccHHhhhhheeeCC
Confidence            7889999999999999999999888899999999999998888 6899999999999 66

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A

Probab=100.00  E-value=7.6e-38  Score=333.31  Aligned_cols=214  Identities=17%  Similarity=0.183  Sum_probs=178.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc----cc----cc-c-----ccccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI----SR----FT-D-----EKSYCMP  646 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~----~~----~~-~-----~~~~~~~  646 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......    ..    +. .     ...+..+
T Consensus        29 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  108 (280)
T 1pjh_A           29 NLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAF  108 (280)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999999998875321100    00    00 0     1112334


Q ss_pred             ccCCCCEEEEecccccchhhhhhhcccccccc-ccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFS-EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~-~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      ..+||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|++|++++|++++|..+++++++||++|+|+|
T Consensus       109 ~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltg~~~~a~e  188 (280)
T 1pjh_A          109 IKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDI  188 (280)
T ss_dssp             HHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHTTCCEEHHH
T ss_pred             HhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHH
Confidence            45999999999999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCcccccChh-----hHHHHHH-HHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHH
Q psy11396        726 LKERGISMPVLPRK-----QVLFYSL-KLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITN  799 (829)
Q Consensus       726 A~~~GLv~~v~~~~-----~l~~~~~-~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~  799 (829)
                      |+++||||+|+|.+     ++.+++. +++++|+..+|.+++.+|++++......++...             +++.+++
T Consensus       189 A~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~-------------~~d~~e~  255 (280)
T 1pjh_A          189 MCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKAN-------------SVEVNES  255 (280)
T ss_dssp             HHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHH-------------HHHHHHH
T ss_pred             HHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHHHHHHHhh-------------hHHHHHH
Confidence            99999999999985     7888885 999999999999999999999976543333222             3455566


Q ss_pred             HHHHHhhc
Q psy11396        800 IERYFDKS  807 (829)
Q Consensus       800 ~~~~~~k~  807 (829)
                      +.+|++|+
T Consensus       256 ~~af~~kr  263 (280)
T 1pjh_A          256 LKYWVDGE  263 (280)
T ss_dssp             HHHHHHTH
T ss_pred             HHHHhCCc
Confidence            66666554

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=100.00  E-value=2e-37  Score=344.24  Aligned_cols=225  Identities=15%  Similarity=0.166  Sum_probs=197.5

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-----c---cc-c-ccccccccccC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-----S---RF-T-DEKSYCMPLYC  649 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-----~---~~-~-~~~~~~~~~~~  649 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|+.++.......     .   .+ . ....+..+..+
T Consensus        62 ~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  141 (407)
T 3ju1_A           62 ALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYRLDYLLHTY  141 (407)
T ss_dssp             GTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            35889999999999999999999999999999998 7999999999876432110     0   00 0 01123344569


Q ss_pred             CCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHc
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKER  729 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~  729 (829)
                      ||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++| .+++++++||++|+|+||+++
T Consensus       142 ~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g-~~A~~l~ltG~~i~A~eA~~~  220 (407)
T 3ju1_A          142 GKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG-KMGLFLGLTAYHMNAADACYV  220 (407)
T ss_dssp             SSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST-THHHHHHHHCCCBCHHHHHHH
T ss_pred             CCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH-HHHHHHHHcCCcCcHHHHHHC
Confidence            9999999999999999999999999999999999999999999999999999999999 999999999999999999999


Q ss_pred             CCcccccChhhHHH---H----------------HHHH------------------------------------------
Q psy11396        730 GISMPVLPRKQVLF---Y----------------SLKL------------------------------------------  748 (829)
Q Consensus       730 GLv~~v~~~~~l~~---~----------------~~~~------------------------------------------  748 (829)
                      ||||+|+|++++.+   +                +.++                                          
T Consensus       221 GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~~I~~~f~~sv~~i~~~L~~~  300 (407)
T 3ju1_A          221 GLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEMIDRLMAGSLTDIVTRMSTL  300 (407)
T ss_dssp             TSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHHHHHHHTCSCHHHHHHHHHHC
T ss_pred             CCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence            99999999988877   3                3221                                          


Q ss_pred             ----------HHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH-hhc
Q psy11396        749 ----------AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF-DKS  807 (829)
Q Consensus       749 ----------a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~-~k~  807 (829)
                                +++|+..+|.+++.+|+++++....++++.++.|...+..++ .+++++|++++|+ +|.
T Consensus       301 ~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~-~s~D~~EGvrAflidKd  369 (407)
T 3ju1_A          301 STDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVC-AKGDFCEGVRALLIDKD  369 (407)
T ss_dssp             CCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHH-HHSSHHHHHHHHTTSCC
T ss_pred             ccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHhcCC
Confidence                      478999999999999999999998899999999999999999 6889999999998 773

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}

Probab=100.00  E-value=8e-38  Score=328.13  Aligned_cols=218  Identities=15%  Similarity=0.164  Sum_probs=185.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc--c-cccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR--F-TDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~--~-~~~~~~~~~~~~~kp~Iaav  657 (829)
                      +.|++|.+|+.+|.++++.+++ +++|+|||+|.|+.||+|+|++++.........  + .....+..+..+||||||+|
T Consensus        27 ~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  105 (254)
T 3isa_A           27 KRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALA  105 (254)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHTCSSEEEEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            3588999999999999999986 589999999999999999999887532211100  0 01122344556999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||+++|++|   ++++|++++|..++++++++|++|+++||+++||||+|+|
T Consensus       106 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~  182 (254)
T 3isa_A          106 HGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSILGSARAFDADEARRIGFVRDCAA  182 (254)
T ss_dssp             CSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHHTTTCEEEHHHHHHTTSSSEECC
T ss_pred             CCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHHHhCCCCcHHHHHHCCCccEEeC
Confidence            9999999999999999999999999999999999998   3689999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcccc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKK  810 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~  810 (829)
                      ++++++++.+++++++..++.+++.+|++++..   .    ++.|...+...+ .+++++|+|++|++||...
T Consensus       183 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~---~----~~~e~~~~~~~~-~s~d~~egi~af~ekr~p~  247 (254)
T 3isa_A          183 QAQWPALIDAAAEAATALDPATRATLHRVLRDD---H----DDADLAALARSA-AQPGFKARIRDYLAQPAAE  247 (254)
T ss_dssp             GGGHHHHHHHHHHHHTTSCHHHHHHHHHHHSCC---C----HHHHHHHHHHHH-HSTTHHHHHHHHHHC----
T ss_pred             hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHhhh---h----HHHHHHHHHHHh-CCHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999999998532   2    345666777777 6899999999999998543

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D

Probab=100.00  E-value=3.3e-37  Score=324.18  Aligned_cols=214  Identities=21%  Similarity=0.277  Sum_probs=184.9

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--cccc--ccccccccccCCCCEEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRFT--DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~~~--~~~~~~~~~~~~kp~Iaa  656 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++.......  ..+.  ....+..+..+||||||+
T Consensus        44 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa  123 (263)
T 2j5g_A           44 SSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISA  123 (263)
T ss_dssp             BSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            357789999999999999999999999999999999999999998865321100  0000  012233445699999999


Q ss_pred             ecccccchhhhhhhccccccccccceecc-ccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~-~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      |||+|+ ||++|+++||+||++++++|++ ||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|
T Consensus       124 v~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~v  202 (263)
T 2j5g_A          124 VNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEV  202 (263)
T ss_dssp             ECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTCCEEHHHHHHTTSCSEE
T ss_pred             ECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEe
Confidence            999999 5999999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|++++.+++.+++++|+..+|.+++.+|++++......+++.+..|            ...|+|.+|++|+
T Consensus       203 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e------------~~~eg~~af~~~~  262 (263)
T 2j5g_A          203 LPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYG------------LALEGITATDLRN  262 (263)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHTTC
T ss_pred             cChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHH------------HHHhhHHHHHhcc
Confidence            99999999999999999999999999999999987655555544443            3459999999976

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*

Probab=100.00  E-value=2.9e-37  Score=319.60  Aligned_cols=204  Identities=15%  Similarity=0.082  Sum_probs=179.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-cc--cccccccccccCCCCEEEEec
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-RF--TDEKSYCMPLYCKIPVIAAMQ  658 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~~--~~~~~~~~~~~~~kp~Iaav~  658 (829)
                      .|++|.+|+.+|.++++.+++| ++|+|||||.|+.||+|+|++++........ .+  .....+..+..+||||||+||
T Consensus        25 ~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~  103 (233)
T 3r6h_A           25 VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPKPVVIACT  103 (233)
T ss_dssp             SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence            5899999999999999999987 6899999999999999999998764311100 00  011223445569999999999


Q ss_pred             ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      |+|+|||++|+++||+||++++++|++||+++|++|++++++++++++|+.++++++++|++|+|+||+++||||+|+|+
T Consensus       104 G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~  183 (233)
T 3r6h_A          104 GHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLP  183 (233)
T ss_dssp             SEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHHHHHHSCCEECHHHHHHHTSCSEECCG
T ss_pred             CcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCCcEeeCH
Confidence            99999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHH
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMH  786 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~  786 (829)
                      +++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+
T Consensus       184 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~f  231 (233)
T 3r6h_A          184 EVVLSRAEEAAREFAGLNQQAHNATKLRARAEALKAIRAGIDGIEAEF  231 (233)
T ss_dssp             GGHHHHHHHHHHHHHTSCHHHHHHHHHHTTHHHHHHHHHHHHTSHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence            999999999999999999999999999999988777888888777654

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}

Probab=100.00  E-value=4.7e-37  Score=317.88  Aligned_cols=203  Identities=16%  Similarity=0.139  Sum_probs=179.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEecc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAMQG  659 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav~G  659 (829)
                      .|++|.+|+.+|.++++.+++|  +|+|||||.|+.||+|+|++++.........+.  ....+..+..+||||||+|||
T Consensus        26 ~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G  103 (232)
T 3ot6_A           26 VNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPG  103 (232)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSCEEEECCE
T ss_pred             CCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhChHHHHHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence            5889999999999999999976  489999999999999999998764222111100  112234455699999999999


Q ss_pred             cccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      +|+|||++|+++||+||++++ ++|++||+++|++|++++++++++++|..++++++++|++|+|+||+++||||+|+|+
T Consensus       104 ~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l~ltg~~i~A~eA~~~GLv~~vv~~  183 (232)
T 3ot6_A          104 HAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPEGAMAAGFLDKVVSV  183 (232)
T ss_dssp             EEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCCEECHHHHHHHTSCSEEECT
T ss_pred             EeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCCCEecCH
Confidence            999999999999999999998 8999999999999888888899999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHH
Q psy11396        739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMH  786 (829)
Q Consensus       739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~  786 (829)
                      +++.+++.+++++|+..+|.+++.+|++++......+++.++.|.+.+
T Consensus       184 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~  231 (232)
T 3ot6_A          184 EELQGAALAVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQDRQHM  231 (232)
T ss_dssp             TTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHhc
Confidence            999999999999999999999999999999988878888888887653

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A

Probab=100.00  E-value=9e-36  Score=324.21  Aligned_cols=190  Identities=16%  Similarity=0.268  Sum_probs=162.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-----------------------c
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-----------------------F  637 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-----------------------~  637 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|.|+.++.........                       +
T Consensus        55 ~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (333)
T 3njd_A           55 KGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPW  134 (333)
T ss_dssp             GTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCHHHHHHTTCSSSCC
T ss_pred             ccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccccccccccccccccccccccccccc
Confidence            35899999999999999999999999999999999999999999887543211000                       0


Q ss_pred             ------c----ccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccC
Q psy11396        638 ------T----DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG  707 (829)
Q Consensus       638 ------~----~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG  707 (829)
                            .    ....+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+++   +|++++|
T Consensus       135 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~~pe~~lG~~P~~g---~l~~~vG  211 (333)
T 3njd_A          135 DPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLG  211 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEECGGGGTTCCCTTC---CHHHHHC
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCeeechhhceeccCHHH---HHHHHHH
Confidence                  0    00112334459999999999999999999999999999999999999999999999875   5899999


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK  773 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~  773 (829)
                      ..++++++++|+.|+|+||+++||||+|+|++++++++.+++++|+..|+.+++.+|++++..+..
T Consensus       212 ~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~~~K~~l~~~~~~  277 (333)
T 3njd_A          212 DQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLIMAKLACNTALLN  277 (333)
T ss_dssp             HHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999988754

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A

Probab=100.00  E-value=7.8e-36  Score=313.12  Aligned_cols=214  Identities=19%  Similarity=0.233  Sum_probs=181.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cccc--ccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SRFT--DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~~~--~~~~~~~~~~~~kp~Iaav  657 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++....... ..+.  ....+..+..+||||||+|
T Consensus        36 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav  115 (257)
T 1szo_A           36 KSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAV  115 (257)
T ss_dssp             BSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            357789999999999999999999999999999999999999998764211000 0000  0112233445999999999


Q ss_pred             cccccchhhhhhhccccccccccceecc-ccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~-~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      ||+|+ ||++|+++||+||++++++|++ ||+++|++|++|++++|++++|..++++++++|++|+++||+++||||+|+
T Consensus       116 ~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~vv  194 (257)
T 1szo_A          116 NGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVL  194 (257)
T ss_dssp             CSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHHHHHHHTSCSEEE
T ss_pred             CCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCceEEe
Confidence            99999 5999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |++++.+++.+++++|+..+|.+++.+|++++......+++.++.+..            .|++.+|..+.
T Consensus       195 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~~~~------------~eg~~a~~~~~  253 (257)
T 1szo_A          195 SEQELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGLA------------HEALAAIDLGM  253 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHHHH------------HHHHHHHHHC-
T ss_pred             ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHHHH------------Hhhhhhhhccc
Confidence            999999999999999999999999999999998766556665555432            25677776553

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*

Probab=100.00  E-value=1e-35  Score=329.56  Aligned_cols=222  Identities=17%  Similarity=0.188  Sum_probs=183.2

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCC--------C-CeeeccCChhhhhhhhcccccc------c-cccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY--------E-NYFACGGTKEGLLKIQKGISRF------T-DEKSYC  644 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~--------g-~~F~~G~D~~~~~~~~~~~~~~------~-~~~~~~  644 (829)
                      +.|++|.+|+.+|.++++.++.|+++|+|||||.        | ++||+|+|++++.........+      . ....+.
T Consensus       187 k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (440)
T 2np9_A          187 RLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVR  266 (440)
T ss_dssp             TTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTHHHHHHTHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCcchhhhhhHHHHHHHHHHHH
Confidence            4688999999999999999999999999999994        6 8999999999875421111000      0 001111


Q ss_pred             c------------cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHH
Q psy11396        645 M------------PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR  712 (829)
Q Consensus       645 ~------------~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~  712 (829)
                      .            +..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +++|++++|..+++
T Consensus       267 ~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lGl~P~~g-~~~L~rlvG~~~A~  345 (440)
T 2np9_A          267 GVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAA-NLRLGRFAGPRVSR  345 (440)
T ss_dssp             CEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTCCCCTTH-HHHHHHHHHHHHHH
T ss_pred             HHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccCcCcchH-HHHHHHHhhHHHHH
Confidence            1            1359999999999999999999999999999999999999999999999887 58999999999999


Q ss_pred             HHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHH---HHHHHHHHHHHhh
Q psy11396        713 EILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLS---TIFLHELTMHDYT  789 (829)
Q Consensus       713 e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~---~~~~~e~~~~~~~  789 (829)
                      +++++|+.|+++||+++||||+|||++++++++.+++++|+   +.++..+|++++.... .++   +.+..|...+...
T Consensus       346 ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la---~~Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~  421 (440)
T 2np9_A          346 QVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLD---GDAVLANRRMLNLADE-SPDGFRAYMAEFALMQALR  421 (440)
T ss_dssp             HHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTC---SHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhC---HHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998874   4789999999997654 443   3445555566666


Q ss_pred             hcCChHHHHHHHHHHhhcc
Q psy11396        790 FVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       790 ~~~~~~~~e~~~~~~~k~~  808 (829)
                      + .+++.+|++.+|++||.
T Consensus       422 ~-~s~D~~Egv~AFleKR~  439 (440)
T 2np9_A          422 L-YGHDVIDKVGRFGGRPP  439 (440)
T ss_dssp             H-TCHHHHHHHHTCC----
T ss_pred             h-cCHHHHHHHHHHHhCCC
Confidence            7 68999999999999873

>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A

Probab=100.00  E-value=1.4e-34  Score=307.45  Aligned_cols=202  Identities=18%  Similarity=0.262  Sum_probs=168.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc--------cccccccccccCCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF--------TDEKSYCMPLYCKIP  652 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~--------~~~~~~~~~~~~~kp  652 (829)
                      +.|++|.+|+.+|.++++.+++|+++|+|||+|.|+.||+|+|++++..........        .....+..+..+|||
T Consensus        40 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP  119 (279)
T 3t3w_A           40 AANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKP  119 (279)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHHHHHHHHHHHTHHHHHHHHHCSSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            468899999999999999999999999999999999999999998875432111000        001122334459999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      |||+|||+|+|||++|+++||+||++++++|++||+++|+ |+.++.. +++++|+.++++++++|++|+|+||+++|||
T Consensus       120 vIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~-~~~~vG~~~A~~llltG~~i~A~eA~~~GLv  197 (279)
T 3t3w_A          120 SIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHG-HTWELGPRKAKEILFTGRAMTAEEVAQTGMV  197 (279)
T ss_dssp             EEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCC-HHHHHCHHHHHHHHHHCCCEEHHHHHHHTSC
T ss_pred             EEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHH-HHhhcCHHHHHHHHHcCCccCHHHHHHCCCC
Confidence            9999999999999999999999999999999999999999 4444443 4999999999999999999999999999999


Q ss_pred             ccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCHHHHHHHHHH
Q psy11396        733 MPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKLSTIFLHELT  784 (829)
Q Consensus       733 ~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~~~~~~~e~~  784 (829)
                      |+|+|++++.+++.+++++|+..+|.+++.+|++++.... ..+++.++.+..
T Consensus       198 ~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~  250 (279)
T 3t3w_A          198 NRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVNQTLDVQGFYAAIQSVFD  250 (279)
T ss_dssp             SEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             cEeeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcccHHHHHHHHhh
Confidence            9999999999999999999999999999999999998764 356666555543

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=100.00  E-value=1.5e-34  Score=342.53  Aligned_cols=224  Identities=20%  Similarity=0.266  Sum_probs=200.8

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccccc
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAI  662 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~  662 (829)
                      |++|.+|+.+|.+++++++.|+++|+|||||.|+.||+|+|++++.......   .....+..+..+||||||+|||+|+
T Consensus        42 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~~---~~~~~~~~i~~~~kPvIAai~G~a~  118 (742)
T 3zwc_A           42 NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGL---ALGSLVDEIQRYQKPVLAAIQGVAL  118 (742)
T ss_dssp             TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSCS---HHHHHHHHHHHCSSCEEEEECSEEE
T ss_pred             cCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChhH---HHHHHHHHHHhCCCCEEEEECccch
Confidence            8899999999999999999999999999999999999999998875433221   1222334455699999999999999


Q ss_pred             chhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396        663 GAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL  742 (829)
Q Consensus       663 GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~  742 (829)
                      |||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|+++++||+.++++||+++||||+|+|.+. .
T Consensus       119 GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~~i~a~eA~~~GLv~~vv~~d~-~  197 (742)
T 3zwc_A          119 GGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDP-V  197 (742)
T ss_dssp             THHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEESSCH-H
T ss_pred             HHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCCchhHHHHHHcCCccEecCchh-h
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998765 5


Q ss_pred             HHHHHHHHHHhcCCH----------------------------------HHHHHHHHHHHhhhhCCHHHHHHHHHHHHHh
Q psy11396        743 FYSLKLAKKLSLLSK----------------------------------KELELQKKYYSHSLQKKLSTIFLHELTMHDY  788 (829)
Q Consensus       743 ~~~~~~a~~i~~~~~----------------------------------~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~  788 (829)
                      +++.++|++|+..++                                  .+....++.++.....+++++++.|.+.|.+
T Consensus       198 ~~A~~~A~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~A~~~~~~~v~~~~~~~~~~gl~~E~~~F~~  277 (742)
T 3zwc_A          198 EEAIKFAQKIIDKPIEPRRIFNKPVPSLPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMY  277 (742)
T ss_dssp             HHHHHHHHHHTTSCSGGGCGGGSCCCCCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCchhhhhhcccccccchhhhhHHHHHHHHhhhccchhHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence            678899999998765                                  3677788899999999999999999999999


Q ss_pred             hhcCChHHHHHHHHHHhhccccC
Q psy11396        789 TFVNNPSVITNIERYFDKSIKKN  811 (829)
Q Consensus       789 ~~~~~~~~~e~~~~~~~k~~~~~  811 (829)
                      ++ .+++.++.+..|++++..++
T Consensus       278 l~-~s~~~k~~~~aFf~~r~~~k  299 (742)
T 3zwc_A          278 LR-ASGQAKALQYAFFAEKSANK  299 (742)
T ss_dssp             HH-TSHHHHHHHHHHHHHHHTTS
T ss_pred             hc-CCHHHHHHHHHHHHHhhccc
Confidence            99 79999999999998876443

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=100.00  E-value=6.5e-34  Score=339.33  Aligned_cols=232  Identities=18%  Similarity=0.204  Sum_probs=198.1

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCC-eeeccCChhhhhhhhcc----cccc--cccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYEN-YFACGGTKEGLLKIQKG----ISRF--TDEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~-~F~~G~D~~~~~~~~~~----~~~~--~~~~~~~~~~~~~kp~  653 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+||||| |+ .||+|+|+.++......    ...+  .....+..+..+||||
T Consensus        27 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  105 (725)
T 2wtb_A           27 PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDLLEAARKPS  105 (725)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------CCSSSHHHHHCCCCCCCTSSSCE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhhhHHHHHHHHHHHHHHHHhCcCcE
Confidence            468899999999999999999999999999999 76 99999999887542211    0111  1122334455699999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|++++++|+.|+|+||+++||||
T Consensus       106 IAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A~~l~ltG~~~~a~eA~~~GLv~  185 (725)
T 2wtb_A          106 VAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID  185 (725)
T ss_dssp             EEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCS
T ss_pred             EEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcC--CHH-HH---------------------------------HHHHHHHHhhhhCCHHH
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLL--SKK-EL---------------------------------ELQKKYYSHSLQKKLST  777 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~--~~~-a~---------------------------------~~~K~~l~~~~~~~~~~  777 (829)
                      +|+|++++.+++.+++++++..  ++. ++                                 ..+|++++.....++++
T Consensus       186 ~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~g~pA~~~~k~~~~~~~~~~~~~  265 (725)
T 2wtb_A          186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRA  265 (725)
T ss_dssp             EECCTTTHHHHHHHHHHHHHTTSSCCCCGGGCCTTSCCHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHSCHHH
T ss_pred             eEcChhHHHHHHHHHHHHHHhcCCChhhhhhhccccCccchHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHhccCCHHH
Confidence            9999999999999999999876  332 22                                 47899999888889999


Q ss_pred             HHHHHHHHHHhhhcCChHHHHHHHHHHhhccccCCCc
Q psy11396        778 IFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNSK  814 (829)
Q Consensus       778 ~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~~~k  814 (829)
                      .++.|...+..++ .+++.++++.+|++|+.-++..+
T Consensus       266 ~l~~E~~~~~~l~-~s~~~~~~~~aF~~kr~~~~~~~  301 (725)
T 2wtb_A          266 GLEKEAEVASQVV-KLDTTKGLIHVFFSQRGTAKVPG  301 (725)
T ss_dssp             HHHHHHHHHHHHT-TCHHHHHHHHHHHHHHGGGCCTT
T ss_pred             HHHHHHHHHHHHh-cchhHHHHHHHhhhhhhhcccCC
Confidence            9999999999998 78999999999999987555443

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=100.00  E-value=1.2e-32  Score=308.65  Aligned_cols=263  Identities=17%  Similarity=0.201  Sum_probs=215.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv  280 (829)
                      ++|+++++++||+|||+++++++    ++++|+..+++.                  ...++.++++.+|+  +||+++|
T Consensus        31 ~~L~~~a~~~Al~dAGl~~~~id----~v~~g~~~~~~~------------------~~~~a~~ia~~lgl~~~~p~~~v   88 (397)
T 1wl4_A           31 QDLGSTVIKEVLKRATVAPEDVS----EVIFGHVLAAGC------------------GQNPVRQASVGAGIPYSVPAWSC   88 (397)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS------------------CSCHHHHHHHHTTCCTTSCEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC------------------CCHHHHHHHHHcCCCCCccEEEe
Confidence            67999999999999999998888    788887654331                  13578899999999  8999999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hHH-------------------------------HHHHH----
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PDI-------------------------------HIKMS----  324 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~-------------------------------~~~~~----  324 (829)
                      +++|+|++.||++|+++|++|++|++||||+|.++. |..                               +....    
T Consensus        89 ~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~  168 (397)
T 1wl4_A           89 QMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVA  168 (397)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHH
T ss_pred             cCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHH
Confidence            999999999999999999999999999999998763 110                               00000    


Q ss_pred             -------------------------HcCC------------------CCCCC------------CCCC-CCCCCCCcc--
Q psy11396        325 -------------------------KSGM------------------LSPDG------------HCYS-FDQRANGFV--  346 (829)
Q Consensus       325 -------------------------~~g~------------------ls~~~------------~~~p-fd~~~~G~~--  346 (829)
                                               ..+.                  ++++.            .++| ||.+++|++  
T Consensus       169 ~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~  248 (397)
T 1wl4_A          169 KKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTP  248 (397)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCT
T ss_pred             HHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEec
Confidence                                     0111                  11222            4889 999999999  


Q ss_pred             -----cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        347 -----PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       347 -----~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                           ++|||+++||++++.|+++|.+|+++|+|++.+++..     .+.+.++..+++++|+++|++|+||||||.|  
T Consensus       249 ~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ie~~--  321 (397)
T 1wl4_A          249 ANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEP-----SIMGIGPIPAIKQAVTKAGWSLEDVDIFEIN--  321 (397)
T ss_dssp             TSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC--
T ss_pred             hhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecCh-----hhccchHHHHHHHHHHHcCCCHHHCCEEEEe--
Confidence                 9999999999999999999999999999999987432     2234567899999999999999999999987  


Q ss_pred             CCCCCChHHHHH--HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        422 GTKLGDPIEFEA--LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       422 gt~~gD~~E~~A--l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                           |..|.++  +.+.|+-   ...++++++.|.++|||+||+|+.++++++++|+++                    
T Consensus       322 -----d~f~~~~l~~~~~lg~---~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--------------------  373 (397)
T 1wl4_A          322 -----EAFAAVSAAIVKELGL---NPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--------------------  373 (397)
T ss_dssp             -----CSBHHHHHHHHHHHTC---CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred             -----cccHHHHHHHHHHcCC---CCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc--------------------
Confidence                 6666644  6777864   234688999999999999999999999999999884                    


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                      ..++++++..+-||++.++|||.
T Consensus       374 ----------------~~~~gl~~~~~ggG~~~a~~~e~  396 (397)
T 1wl4_A          374 ----------------GRSRGVAALCIGGGMGIAMCVQR  396 (397)
T ss_dssp             ----------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred             ----------------CCCEEEEEEecccchheEEEEEe
Confidence                            12578888887789999999985

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=100.00  E-value=6.1e-33  Score=310.19  Aligned_cols=270  Identities=16%  Similarity=0.218  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHHHHc-CCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcce
Q psy11396        202 QQRLFLQNCWTCIEDA-GYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCL  278 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dA-Gl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~  278 (829)
                      .++|+++++++||+|| |+++++++    ++++|+..+++.                 ..+.++.++++.+|+  +||++
T Consensus        30 ~~~L~~~a~~~AL~dA~gl~~~~id----~v~~g~~~~~~~-----------------~~~~~a~~ia~~lgl~~~~p~~   88 (390)
T 1wdk_C           30 AEDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTLE-----------------QGWNIARMASLMTQIPHTSAAQ   88 (390)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSBT-----------------TTTTHHHHHHTTSSSCTTSEEE
T ss_pred             HHHHHHHHHHHHHHhccCCCHHHCC----EEEEEeeccccC-----------------CCCcHHHHHHHHcCCCCCccEE
Confidence            4689999999999999 99988887    899987655432                 124578899999999  89999


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hHHH------------------HHH------HHcC------
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PDIH------------------IKM------SKSG------  327 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~------------------~~~------~~~g------  327 (829)
                      +|+++|+|++.||++|+++|++|+||++||||+|.++. |...                  +..      .+.|      
T Consensus        89 ~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~  168 (390)
T 1wdk_C           89 TVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQ  168 (390)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHH
T ss_pred             EEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHH
Confidence            99999999999999999999999999999999998643 2100                  000      0001      


Q ss_pred             ------------------CCC----C------CCCCCCCCCC---------------------CCCcc-------cccce
Q psy11396        328 ------------------MLS----P------DGHCYSFDQR---------------------ANGFV-------PGEGV  351 (829)
Q Consensus       328 ------------------~ls----~------~~~~~pfd~~---------------------~~G~~-------~gEGa  351 (829)
                                        .+.    |      .+.++|||.+                     ++|++       ++||+
T Consensus       169 ~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGA  248 (390)
T 1wdk_C          169 DAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGA  248 (390)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchh
Confidence                              111    1      1122689988                     79999       99999


Q ss_pred             EEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHH
Q psy11396        352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEF  431 (829)
Q Consensus       352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~  431 (829)
                      +++||+++++|+++|.+|+++|+|++.+++..     .+.+.++..++++||+++|++|+||||||+|+++|.     |.
T Consensus       249 aavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~-----~~  318 (390)
T 1wdk_C          249 SCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDP-----AIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAA-----QA  318 (390)
T ss_dssp             EEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHH-----HH
T ss_pred             heeEEecHHHHHHcCCCccEEEEEEEEeccCh-----hhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHH-----HH
Confidence            99999999999999999999999999987643     233456789999999999999999999999988763     66


Q ss_pred             HHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccc
Q psy11396        432 EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD  511 (829)
Q Consensus       432 ~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~  511 (829)
                      .++.+.|+-......++++++.|.++|||+||+|+.++++++++|+++                                
T Consensus       319 ~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~--------------------------------  366 (390)
T 1wdk_C          319 LPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN--------------------------------  366 (390)
T ss_dssp             HHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--------------------------------
T ss_pred             HHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc--------------------------------
Confidence            777778864210023578899999999999999999999999999984                                


Q ss_pred             ccccCccEEEEeccCCCCceEEEEeee
Q psy11396        512 IKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       512 ~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                          ..++++++..+-||.+.++|||.
T Consensus       367 ----~~~~gl~~~~~ggG~~~a~~~~~  389 (390)
T 1wdk_C          367 ----GGTFGLSTMCIGLGQGIATVFER  389 (390)
T ss_dssp             ----TCSEEEEEEEETTTEEEEEEEEC
T ss_pred             ----CCCEEEEEecccchheEEEEEEe
Confidence                12467888787789999999984

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=99.98  E-value=3.2e-33  Score=333.25  Aligned_cols=229  Identities=17%  Similarity=0.182  Sum_probs=198.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCC-eeeccCChhhhhhhhccc--ccc----cccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYEN-YFACGGTKEGLLKIQKGI--SRF----TDEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~-~F~~G~D~~~~~~~~~~~--~~~----~~~~~~~~~~~~~kp~  653 (829)
                      ..|++|.+|+.+|.++++.++.|+++|+||||| |+ .||+|+|+.++.......  ...    .....+..+..+||||
T Consensus        28 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv  106 (715)
T 1wdk_A           28 SVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPT  106 (715)
T ss_dssp             SSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            468999999999999999999999999999999 76 999999999875421111  000    0112233445599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|++++++|+.|+|+||+++||||
T Consensus       107 IAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A~~l~ltG~~~~a~eA~~~GLv~  186 (715)
T 1wdk_A          107 VAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVD  186 (715)
T ss_dssp             EEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSS
T ss_pred             EEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcC--C----------HH---------HH------------------HHHHHHHHhhhhCC
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLL--S----------KK---------EL------------------ELQKKYYSHSLQKK  774 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~--~----------~~---------a~------------------~~~K~~l~~~~~~~  774 (829)
                      +|+|++++.+++.+++++++..  +          |.         ++                  ..+|++++.....+
T Consensus       187 ~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~~g~~~A~~~~k~~v~~~~~~~  266 (715)
T 1wdk_A          187 AVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFG  266 (715)
T ss_dssp             EEECGGGHHHHHHHHHHHHHTTSSCHHHHHGGGGSCCSCCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred             EEeChHHHHHHHHHHHHHHhhccCCcchhcccccCccccCchhHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhcCC
Confidence            9999999999999999999876  4          21         23                  35667888777778


Q ss_pred             HHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccC
Q psy11396        775 LSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKN  811 (829)
Q Consensus       775 ~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~  811 (829)
                      +++.++.|...+..++ .+++.++++.+|++||..++
T Consensus       267 ~~~~l~~E~~~~~~l~-~s~~~~~~~~aF~~kr~~~~  302 (715)
T 1wdk_A          267 RDKALEVEAAGFAKLA-KTSASNCLIGLFLNDQELKK  302 (715)
T ss_dssp             HHHHHHHHHHHHHHHH-TSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh-cchhHHHHHHHHHhhhhhhc
Confidence            9999999999999998 79999999999999876444

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.97  E-value=2.4e-31  Score=298.31  Aligned_cols=267  Identities=16%  Similarity=0.211  Sum_probs=212.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ..+|+++++++||+|||+++++++    +|++|+..+++.                 ..+..+.++++.+|+  ++|+++
T Consensus        26 ~~~L~~~Aa~~Al~dAgl~~~~id----~v~~g~~~~~~~-----------------~~~~~a~~va~~lGl~~~~p~~~   84 (401)
T 1ulq_A           26 PDDLLAHALSVLVDRSGVPKEEVE----DVYAGCANQAGE-----------------DNRNVARMALLLAGFPVEVAGCT   84 (401)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSST-----------------TTTTHHHHHHHHTTCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC-----------------CCChHHHHHHHHhCCCCCccEee
Confidence            356999999999999999999988    899997655442                 124578899999999  799999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hH---------------------------HHH---------H
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PD---------------------------IHI---------K  322 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~---------------------------~~~---------~  322 (829)
                      |+++|+|++.||++|+++|++|++|++||+|+|.++. |.                           .+.         .
T Consensus        85 v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~  164 (401)
T 1ulq_A           85 VNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMG  164 (401)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHH
T ss_pred             ccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHH
Confidence            9999999999999999999999999999999997654 21                           110         0


Q ss_pred             H----------------------HH--------cCCCC------------------CCC------------CCCC-CCCC
Q psy11396        323 M----------------------SK--------SGMLS------------------PDG------------HCYS-FDQR  341 (829)
Q Consensus       323 ~----------------------~~--------~g~ls------------------~~~------------~~~p-fd~~  341 (829)
                      .                      +.        .|.+.                  ++.            .++| ||. 
T Consensus       165 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~-  243 (401)
T 1ulq_A          165 ETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFRE-  243 (401)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSST-
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCC-
Confidence            0                      00        01211                  111            2456 765 


Q ss_pred             CCCcc-------cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy11396        342 ANGFV-------PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQ  414 (829)
Q Consensus       342 ~~G~~-------~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId  414 (829)
                       +|++       ++|||+++||+++++|+++|.+++++|+|++.+++....     .+.++..++++||++||++|+|||
T Consensus       244 -~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~a~~~al~~Agl~~~dId  317 (401)
T 1ulq_A          244 -GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRI-----MGIGPVPATRKALERAGLSFSDLG  317 (401)
T ss_dssp             -TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-----GGGTHHHHHHHHHHHTTCCGGGCS
T ss_pred             -CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccc-----cchhHHHHHHHHHHHcCCCHHHcC
Confidence             6766       799999999999999999999999999999999875432     134568899999999999999999


Q ss_pred             EEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccC
Q psy11396        415 LLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI  494 (829)
Q Consensus       415 ~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~  494 (829)
                      |||+|++++.    .|...+.. |+- .....++++++.+..+|||+||+|+.++++++++|+++               
T Consensus       318 ~ie~heafa~----~~l~~~~~-lg~-~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~---------------  376 (401)
T 1ulq_A          318 LIELNEAFAA----QALAVLRE-WSL-SMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR---------------  376 (401)
T ss_dssp             EEEECCSBHH----HHHHHHHH-HTC-CTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------
T ss_pred             EEEEecchHH----HHHHHHHH-cCC-CCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc---------------
Confidence            9999988774    46666643 442 11234567777777899999999999999999999985               


Q ss_pred             CcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        495 KLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       495 ~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                           ..++++++++++||+|+++||+.
T Consensus       377 ---------------------~~~~gl~~~~~ggG~~~a~v~~~  399 (401)
T 1ulq_A          377 ---------------------KVQFGLATMCIGVGQGIAVVVEG  399 (401)
T ss_dssp             ---------------------TCSEEEEEEEETTTEEEEEEEEE
T ss_pred             ---------------------CCCEEEEEeecCCcccEEEEEEe
Confidence                                 13579999999999999999985

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.97  E-value=2.7e-31  Score=297.22  Aligned_cols=264  Identities=16%  Similarity=0.197  Sum_probs=210.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      .++|+++++++||+|||+++++++    ++++|+..+++.                  ...++.++++.+|++  ||+++
T Consensus        27 ~~~L~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~~------------------~~~~a~~ia~~lgl~~~~p~~~   84 (392)
T 2vu1_A           27 AHELGATVISAVLERAGVAAGEVN----EVILGQVLPAGE------------------GQNPARQAAMKAGVPQEATAWG   84 (392)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTTS------------------CSCHHHHHHHHTTCCTTSEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC------------------CcHHHHHHHHHcCCCCCceEEE
Confidence            457999999999999999998888    677775443221                  135788999999998  99999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hHH-------------------------------HHHH----
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PDI-------------------------------HIKM----  323 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~-------------------------------~~~~----  323 (829)
                      |+++|+|++.||++|+++|++|+||++||||+|.++. |..                               +...    
T Consensus        85 v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  164 (392)
T 2vu1_A           85 MNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENV  164 (392)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHH
T ss_pred             ecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHH
Confidence            9999999999999999999999999999999998653 110                               0000    


Q ss_pred             -HHc------------------------CCCCC---------CCCCCCCCCC--------------------CCCcc---
Q psy11396        324 -SKS------------------------GMLSP---------DGHCYSFDQR--------------------ANGFV---  346 (829)
Q Consensus       324 -~~~------------------------g~ls~---------~~~~~pfd~~--------------------~~G~~---  346 (829)
                       .+.                        |.+..         ...|+|||.+                    ++|++   
T Consensus       165 ~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~  244 (392)
T 2vu1_A          165 AKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAG  244 (392)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSS
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCc
Confidence             000                        11110         0126789887                    78999   


Q ss_pred             ----cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        347 ----PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       347 ----~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                          ++|||+++||++++.|+++|.+|+++|+|++.+++..     .+.+.++..+++++|+++|++|+||||||+|   
T Consensus       245 ~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~agl~~~dId~ie~~---  316 (392)
T 2vu1_A          245 NASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDP-----KVMGTGPIPASRKALERAGWKIGDLDLVEAN---  316 (392)
T ss_dssp             SBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC---
T ss_pred             ccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecCh-----hhcchhHHHHHHHHHHHcCCCHHHcCEEEec---
Confidence                9999999999999999999999999999999987532     2334567899999999999999999999998   


Q ss_pred             CCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCC
Q psy11396        423 TKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSP  500 (829)
Q Consensus       423 t~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~  500 (829)
                          |..|.+++  .+.|+-   ...++++++.|.++|||+||+|+.++++++++|+++                     
T Consensus       317 ----d~f~~~~l~~~~~lg~---~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~---------------------  368 (392)
T 2vu1_A          317 ----EAFAAQACAVNKDLGW---DPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR---------------------  368 (392)
T ss_dssp             ----CSBHHHHHHHHHHHCC---CGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH---------------------
T ss_pred             ----cccHHHHHHHHHHcCC---CcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc---------------------
Confidence                77787774  666763   234688999999999999999999999999999884                     


Q ss_pred             eeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        501 FFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       501 ~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                     ..++++++..+-||++.++|||.
T Consensus       369 ---------------~~~~gl~~~~~ggG~~~a~~~e~  391 (392)
T 2vu1_A          369 ---------------GARKGLATLCIGGGMGVAMCIES  391 (392)
T ss_dssp             ---------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred             ---------------CCCEEEEEEecccchheEEEEEe
Confidence                           12467776644489999999984

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.97  E-value=2.6e-31  Score=299.78  Aligned_cols=268  Identities=16%  Similarity=0.221  Sum_probs=210.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ..+|+++++++||+|||+++++++    +|++|+..+++.                 ..+.++.++++.+|+  ++|+++
T Consensus        55 ~~~La~~Aa~~AL~dAGl~~~~Id----~vi~g~~~~~~~-----------------~~~~~a~~va~~lGl~~~~p~~~  113 (442)
T 2wu9_A           55 PDDLLAPVLRALIEKTNLNPSEVG----DIVVGTVLAPGS-----------------QRASECRMAAFYAGFPETVAVRT  113 (442)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----CEEEECCSSBHH-----------------HHHHHHHHHHHHTTCCTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCccC-----------------CCChHHHHHHHHcCCCCCceEEE
Confidence            357899999999999999999988    788987654331                 123567899999999  799999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH--------------HH-------HHH---------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD--------------IH-------IKM---------------  323 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~--------------~~-------~~~---------------  323 (829)
                      |+++|+|++.||.+|+++|++|++|++||||+|.++...              .+       +..               
T Consensus       114 v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~  193 (442)
T 2wu9_A          114 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQE  193 (442)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHH
T ss_pred             eCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHH
Confidence            999999999999999999999999999999999865411              00       000               


Q ss_pred             -------H--------HcCCCCC------------------------CC------------CCCC-CCCCCCCcc-----
Q psy11396        324 -------S--------KSGMLSP------------------------DG------------HCYS-FDQRANGFV-----  346 (829)
Q Consensus       324 -------~--------~~g~ls~------------------------~~------------~~~p-fd~~~~G~~-----  346 (829)
                             +        ..|.+..                        +.            .++| ||.  +|++     
T Consensus       194 ~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~--~G~vt~~n~  271 (442)
T 2wu9_A          194 QDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK--DGTTTAGNS  271 (442)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--TCCCCGGGB
T ss_pred             HHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--CCCeechhc
Confidence                   0        0223321                        11            2345 764  5766     


Q ss_pred             --cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396        347 --PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       347 --~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~  424 (829)
                        ++|||+++||++++.|+++|.+|+++|+|++.+++...     +.+.++..++++||++||++|+||||||+|+++|.
T Consensus       272 s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~  346 (442)
T 2wu9_A          272 SQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA-----IMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFAS  346 (442)
T ss_dssp             CCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGG-----GGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBHH
T ss_pred             CCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCch-----hcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCChH
Confidence              79999999999999999999999999999999887432     12456789999999999999999999999999996


Q ss_pred             CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeec
Q psy11396        425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFIN  504 (829)
Q Consensus       425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~  504 (829)
                          .|..++. .|+-   ...++++++.+..+|||+||+|+.++++++++|+++. |                      
T Consensus       347 ----~~l~~~~-~lG~---~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-~----------------------  395 (442)
T 2wu9_A          347 ----QFVYCRN-KLGL---DPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-K----------------------  395 (442)
T ss_dssp             ----HHHHHHH-HHTC---CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-T----------------------
T ss_pred             ----HHHHHHH-HhCC---CCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-C----------------------
Confidence                4777774 4552   1234555555556899999999999999999999853 0                      


Q ss_pred             cccccccccccCccEEEE-eccCCCCceEEEEeeecc
Q psy11396        505 TKCKSWDIKNKKKRMAAI-NSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       505 ~~~~~~~~~~~~~~~a~v-~s~G~gG~na~~vl~e~~  540 (829)
                                 ..+++++ +++| ||.|+++||+.+.
T Consensus       396 -----------~~~~glas~~~G-GG~~~a~v~~~~~  420 (442)
T 2wu9_A          396 -----------DCRFGVVSMCIG-TGMGAAAVFERGD  420 (442)
T ss_dssp             -----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred             -----------CCCEEEEEeecc-cchheEEEEEecc
Confidence                       1356775 6788 9999999999763

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.97  E-value=1.4e-33  Score=324.35  Aligned_cols=347  Identities=11%  Similarity=0.026  Sum_probs=250.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeecc
Q psy11396        204 RLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAIDT  282 (829)
Q Consensus       204 ~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~~  282 (829)
                      .|+.+|+++||+|||+++++++....|++++.......          ...........++..++..+|+.+ |.++++.
T Consensus        44 dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~----------~~~~~~g~~~~~~~~va~~lGl~~~~~~~~~~  113 (520)
T 4egv_A           44 ELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISG----------PASAPLGVSSNYPRSVARNIGADPAHAVLEVI  113 (520)
T ss_dssp             HHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC------------------------CCHHHHHHHHHTCCCSEEEECCS
T ss_pred             HHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccc----------hhhhhhccccCHHHHHHHHcCCCCceEEEecC
Confidence            48899999999999999998876666776654322110          011112234456788999999986 6778999


Q ss_pred             chhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHH-------------------------------------
Q psy11396        283 ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK-------------------------------------  325 (829)
Q Consensus       283 acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~-------------------------------------  325 (829)
                      +|+|++.+|++|++.|++|+||++|+||+|+|++.........                                     
T Consensus       114 ~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~  193 (520)
T 4egv_A          114 GGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPV  193 (520)
T ss_dssp             STTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHH
T ss_pred             CCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHH
Confidence            9999999999999999999999999999999865422110000                                     


Q ss_pred             ------------cCC---------------------CCCCCC--------------------CCCCCCCCCCcccccceE
Q psy11396        326 ------------SGM---------------------LSPDGH--------------------CYSFDQRANGFVPGEGVG  352 (829)
Q Consensus       326 ------------~g~---------------------ls~~~~--------------------~~pfd~~~~G~~~gEGaa  352 (829)
                                  .+.                     ..++..                    +.|+....+.+.++|||+
T Consensus       194 ~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAA  273 (520)
T 4egv_A          194 QYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGA  273 (520)
T ss_dssp             HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEE
T ss_pred             HHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceE
Confidence                        000                     000000                    012222345677899999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCC---HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChH
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPN---TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPI  429 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~---~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~  429 (829)
                      ++||.+++.|++.|.++++.|.+++............|+   ..++..+++++|+++|++++|||+||+|.+++     +
T Consensus       274 AvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~-----~  348 (520)
T 4egv_A          274 ALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFP-----F  348 (520)
T ss_dssp             EEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSS-----H
T ss_pred             EEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcH-----H
Confidence            999999999999999999988888776554333222222   56788999999999999999999999997654     4


Q ss_pred             HHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccc
Q psy11396        430 EFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKS  509 (829)
Q Consensus       430 E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~  509 (829)
                      +..+..+.+|-......++.+++.+.++||+.+|+|+.++++++++|+++..+..++  .+|+.++|....+.+.+++++
T Consensus       349 ~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~~~~~l~~~~~~  426 (520)
T 4egv_A          349 PVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKYSVGIYSTEPAD  426 (520)
T ss_dssp             HHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEEEEEEEESSCCC
T ss_pred             HHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeeeeEEEEcCCCCC
Confidence            556666667643334556888888888999999999999999999999998887665  699999999999999999999


Q ss_pred             ccccccCccEEEEeccCCCCceEEEEeeecccCCccccc-ccCCCCceeEEeccccchhhHHHHH
Q psy11396        510 WDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDK-FINNLPIFMVFPLSAKNLSQLLIYA  573 (829)
Q Consensus       510 ~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~-~~~~~~~~~ll~~Sa~~~~~L~~~~  573 (829)
                      |+. .++++++.|++     +|+|++|++.+........ .......|.++++|+|+++.|+.++
T Consensus       427 w~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~~t~~~~~~~~~~~~~~r~~~~~R~~A  485 (520)
T 4egv_A          427 WVA-DNSAQLQAEHD-----AQPKVAITEKADGTGTIETYTVRYDWTPHTGIIIGRLDDGSRFLA  485 (520)
T ss_dssp             CCC-CCHHHHHHHHH-----TSCCCCBCSSCCEEEEEEEEEEESSEESCEEEEEEECSSCCEEEE
T ss_pred             CCC-CCCCccccccc-----CCCCcccccCCCCCCCCCCCCcCCCCCcceEEEEEECchhhHhhh
Confidence            964 56788899988     8999999998753221110 0011234778999999999886554

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.97  E-value=3.7e-31  Score=297.69  Aligned_cols=264  Identities=17%  Similarity=0.225  Sum_probs=212.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ..+|+++++++||+|||+++++++    +|++|+..+++.                  ....+..+++.+|+  ++|+++
T Consensus        55 ~~~L~~~Aa~~AL~dAgl~~~~id----~v~~g~~~~~~~------------------~~~~a~~~a~~lGl~~~~p~~~  112 (418)
T 2iik_A           55 PDELLSAVMTAVLKDVNLRPEQLG----DICVGNVLQPGA------------------GAIMARIAQFLSDIPETVPLST  112 (418)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----CEEEECSSSBGG------------------GHHHHHHHHHHTTCCTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCccc------------------cccHHHHHHHHcCCCCCceEEE
Confidence            467999999999999999999998    789987654431                  12355667888999  789999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH------------------------HHHHH------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD------------------------IHIKM------------  323 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~------------------------~~~~~------------  323 (829)
                      |+++|+|++.||..|+++|++|++|++||+|+|.++...                        .....            
T Consensus       113 v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~  192 (418)
T 2iik_A          113 VNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREK  192 (418)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHH
T ss_pred             eCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHH
Confidence            999999999999999999999999999999999876421                        00000            


Q ss_pred             --------------H-HcCC-----------------------CCCCCCCCC-------------CCCCC-----CCccc
Q psy11396        324 --------------S-KSGM-----------------------LSPDGHCYS-------------FDQRA-----NGFVP  347 (829)
Q Consensus       324 --------------~-~~g~-----------------------ls~~~~~~p-------------fd~~~-----~G~~~  347 (829)
                                    . ..+.                       ++++..|||             ||.++     +|+++
T Consensus       193 ~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~  272 (418)
T 2iik_A          193 QDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQV  272 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCC
T ss_pred             HHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCC
Confidence                          0 0121                       334668888             99876     99999


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD  427 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD  427 (829)
                      +|||+++||++++.|+++|.+|+++|.|++.+....     .+.+.++..++++||++||++|+||||||+|++++ .+|
T Consensus       273 ~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~-~~~  346 (418)
T 2iik_A          273 SDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPP-----DIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFA-SQA  346 (418)
T ss_dssp             EEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCG-----GGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBH-HHH
T ss_pred             CCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCc-----hhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccch-HHH
Confidence            999999999999999999999999999999876422     12235678899999999999999999999998665 568


Q ss_pred             hHHHHHHHHHhcccCCCCCccccCCcc--cCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecc
Q psy11396        428 PIEFEALCESFNKFSYHKNFCALGSVK--SNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT  505 (829)
Q Consensus       428 ~~E~~Al~~~~~~~~~~~~~~~v~s~k--~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~  505 (829)
                      .+|.++|.  +.       ..+|+..+  ..+|||+||+|+.++++++++|+++                          
T Consensus       347 ~~~~~~lg--~~-------~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~--------------------------  391 (418)
T 2iik_A          347 AYCVEKLR--LP-------PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR--------------------------  391 (418)
T ss_dssp             HHHHHHHT--CC-------GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------------------
T ss_pred             HHHHHHcC--CC-------ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--------------------------
Confidence            88887774  11       24677777  4589999999999999999999872                          


Q ss_pred             ccccccccccCcc-EEEEeccCCCCceEEEEeee
Q psy11396        506 KCKSWDIKNKKKR-MAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       506 ~~~~~~~~~~~~~-~a~v~s~G~gG~na~~vl~e  538 (829)
                                ..+ +++++..+-||...++|||.
T Consensus       392 ----------~~~~~gl~~~c~ggG~g~a~~~e~  415 (418)
T 2iik_A          392 ----------GKRAYGVVSMCIGTGMGAAAVFEY  415 (418)
T ss_dssp             ----------TSCEEEEEEEEETTTEEEEEEEEE
T ss_pred             ----------CCCeeeEEEEeeccchhheEEEec
Confidence                      113 68888888899999999985

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.97  E-value=1.1e-30  Score=292.61  Aligned_cols=240  Identities=18%  Similarity=0.237  Sum_probs=191.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      .++|+++++++||+|||+++++++    ++++|+..+++                  .....+.++++.+|+  +||+++
T Consensus        32 ~~~l~~~a~~~Al~dAgl~~~~id----~~~~g~~~~~~------------------~~~~~a~~va~~lgl~~~~p~~~   89 (395)
T 2ib8_A           32 ATKLGSIAIQGAIEKAGIPKEEVK----EAYMGNVLQGG------------------EGQAPTRQAVLGAGLPISTPCTT   89 (395)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTT------------------SCSCHHHHHHHHTTCCTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------------------CCchHHHHHHHHcCCCCCceEEE
Confidence            357999999999999999998888    67777554322                  123468899999999  899999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-------------------HHH-----------------H
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-------------------HIK-----------------M  323 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------------~~~-----------------~  323 (829)
                      |+++|+|++.||++|+++|++|+||++||||+|.+.....                   +..                 .
T Consensus        90 v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~  169 (395)
T 2ib8_A           90 INKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTA  169 (395)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHH
T ss_pred             ecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHH
Confidence            9999999999999999999999999999999997643110                   000                 0


Q ss_pred             HHcC------------------------C-------------------CCCCCCCCC--CCC---------CCCCcc---
Q psy11396        324 SKSG------------------------M-------------------LSPDGHCYS--FDQ---------RANGFV---  346 (829)
Q Consensus       324 ~~~g------------------------~-------------------ls~~~~~~p--fd~---------~~~G~~---  346 (829)
                      ...+                        .                   ++.++.+++  |+.         +++|++   
T Consensus       170 ~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~  249 (395)
T 2ib8_A          170 KKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAA  249 (395)
T ss_dssp             HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTT
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccc
Confidence            1111                        1                   111222222  554         568999   


Q ss_pred             ----cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        347 ----PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       347 ----~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                          ++||++++||++++.|+++|++|+++|+|++.++...     .+.+.++..++++||+++|++|+||||||.|   
T Consensus       250 ~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ie~~---  321 (395)
T 2ib8_A          250 NASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEP-----IDFPIAPVYAASMVLKDVGLKKEDIAMWEVN---  321 (395)
T ss_dssp             TBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCG-----GGGGGHHHHHHHHHHHHHTCCGGGEEEEEEC---
T ss_pred             cCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccCh-----hhccccHHHHHHHHHHHcCCCHHHcCEEEEc---
Confidence                9999999999999999999999999999999875211     1234568899999999999999999999977   


Q ss_pred             CCCCChHHHHHHHHH--hcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhc
Q psy11396        423 TKLGDPIEFEALCES--FNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKH  478 (829)
Q Consensus       423 t~~gD~~E~~Al~~~--~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~  478 (829)
                          |+.|.++|..+  |+-   ...++++++.|..+|||+||+|+.++++++++|++
T Consensus       322 ----D~f~~~~l~~~e~lg~---~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~  372 (395)
T 2ib8_A          322 ----EAFSLVVLANIKMLEI---DPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ  372 (395)
T ss_dssp             ----CSBHHHHHHHHHHHTC---CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred             ----cccHHHHHHHHHHcCC---CccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence                88899988877  653   23468899999999999999999999999999976

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.97  E-value=1.7e-30  Score=290.85  Aligned_cols=265  Identities=16%  Similarity=0.219  Sum_probs=214.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ...|+++++++||+|||+++++++    ++++|+..+++.                  ....+.+++..+|+  ++|+++
T Consensus        31 ~~~L~~~A~~~AL~~agl~~~dId----~vi~g~~~~~~~------------------~~~~a~~v~~~lGl~~~~p~~~   88 (396)
T 4dd5_A           31 AVELGVTAAKEAIKRANITPDMID----ESLLGGVLTAGL------------------GQNIARQIALGAGIPVEKPAMT   88 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSCCTTS------------------CSCHHHHHHHHTTCCTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCCCC------------------CchHHHHHHHHcCCCCCceEEE
Confidence            356999999999999999999998    899997654431                  23467889999999  589999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH--------------------------------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--------------------------------------  321 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~--------------------------------------  321 (829)
                      |+++|+|++.||+.|+++|++|++|.+||+|+|.++......                                      
T Consensus        89 v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  168 (396)
T 4dd5_A           89 INIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAEN  168 (396)
T ss_dssp             ECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHH
T ss_pred             eccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHH
Confidence            999999999999999999999999999999999876521100                                      


Q ss_pred             HH------------------------HHcCC------------------CCCCCCCCC-------------CC-----CC
Q psy11396        322 KM------------------------SKSGM------------------LSPDGHCYS-------------FD-----QR  341 (829)
Q Consensus       322 ~~------------------------~~~g~------------------ls~~~~~~p-------------fd-----~~  341 (829)
                      ..                        ...|.                  +.++..+|+             |+     ..
T Consensus       169 ~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~  248 (396)
T 4dd5_A          169 IAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTA  248 (396)
T ss_dssp             HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBT
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeec
Confidence            00                        00011                  223333332             43     23


Q ss_pred             CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT  421 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt  421 (829)
                      .+++.++||++++||++++.|+++|++|+++|+|++.+++..     .+.+.++..+++++|+++|++|+||||||+|++
T Consensus       249 ~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~  323 (396)
T 4dd5_A          249 GNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDP-----KIMGYGPVPATKKALEAANMTIEDIDLVEANEA  323 (396)
T ss_dssp             TTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred             CCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCC-----CcccHHHHHHHHHHHHHcCCCHHHcCEEEecCh
Confidence            567788999999999999999999999999999999987632     233456889999999999999999999999965


Q ss_pred             CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396        422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF  501 (829)
Q Consensus       422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~  501 (829)
                      +     .+|..++.+.|+-   ...++++++.|.++||++||+|+.++++++++|+++                      
T Consensus       324 f-----~~~~~~~~~~lg~---~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~----------------------  373 (396)
T 4dd5_A          324 F-----AAQSVAVIRDLNI---DMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR----------------------  373 (396)
T ss_dssp             B-----HHHHHHHHHHHTC---CTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------------
T ss_pred             H-----HHHHHHHHHHhCC---CCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc----------------------
Confidence            4     3677788888874   235688999999999999999999999999999883                      


Q ss_pred             eeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                    ..++++++..+-||+..++|||
T Consensus       374 --------------~~~~gl~~~c~ggG~g~a~~~e  395 (396)
T 4dd5_A          374 --------------DAKTGLATLCIGGGMGTTLIVK  395 (396)
T ss_dssp             --------------TCSEEEEEEEETTTEEEEEEEE
T ss_pred             --------------CCCeEEEEEcccCCceeEEEEe
Confidence                          2368999999999999999998

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.97  E-value=2e-30  Score=290.18  Aligned_cols=266  Identities=19%  Similarity=0.231  Sum_probs=215.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ...|+++++++||+|||+++++++    ++++|+..+++.                  ....+.+++..+|+  ++|+++
T Consensus        29 ~~~L~~~A~~~Al~~agl~~~~Id----~v~~g~~~~~~~------------------~~~~a~~i~~~lGl~~~~p~~~   86 (394)
T 3ss6_A           29 PVELAVPVLQEAVKRGGVEPHEVD----EVILGHCIQRTD------------------EANTARTAALAAGFPDTVTGYT   86 (394)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCCGG------------------GCSHHHHHHHHTTCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHhHCC----EEEEEEccCCCc------------------cchHHHHHHHHcCCCCCceEEE
Confidence            356999999999999999999999    889986543321                  22457789999999  589999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH-------------------------------------HH
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-------------------------------------IK  322 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-------------------------------------~~  322 (829)
                      |+++|+|++.||+.|+++|++|++|++||+|+|.++.....                                     ..
T Consensus        87 v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~  166 (394)
T 3ss6_A           87 IQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENL  166 (394)
T ss_dssp             EECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHH
T ss_pred             ecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHH
Confidence            99999999999999999999999999999999987642110                                     00


Q ss_pred             HHH------------------------cC------------------CCCCCCCCCC-------------CCC-----CC
Q psy11396        323 MSK------------------------SG------------------MLSPDGHCYS-------------FDQ-----RA  342 (829)
Q Consensus       323 ~~~------------------------~g------------------~ls~~~~~~p-------------fd~-----~~  342 (829)
                      ...                        .|                  .+.++..+|+             |+.     ..
T Consensus       167 ~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~  246 (394)
T 3ss6_A          167 VEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAG  246 (394)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBST
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecC
Confidence            000                        00                  2345555554             653     36


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      +++.++||++++||++++.|+++|++|+++|+|++.++...     .+.+.++..+++++|+++|++|+||||||+|+++
T Consensus       247 ~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~a~~~al~~agl~~~dId~ve~~d~f  321 (394)
T 3ss6_A          247 NASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDP-----KIMGIGPAPAIRKGLEKVDWSLEDADLLEINEAF  321 (394)
T ss_dssp             TBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSB
T ss_pred             ccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCC-----ccchHHHHHHHHHHHHHcCCCHHHcCEEEeCCch
Confidence            77889999999999999999999999999999999986432     2234467899999999999999999999999553


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                           .+|..++.+.|+-   ...++++++.|.++||+.||+|+.++++++++|+++                       
T Consensus       322 -----a~~~~~~~~~lg~---~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-----------------------  370 (394)
T 3ss6_A          322 -----AAQYLAVEKELDL---DREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR-----------------------  370 (394)
T ss_dssp             -----HHHHHHHHHHHTC---CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-----------------------
T ss_pred             -----HHHHHHHHHHhCC---CCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc-----------------------
Confidence                 3788888888874   234688999999999999999999999999999883                       


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                   ..++++++..+-||...++|||.
T Consensus       371 -------------~~~~gl~~~c~ggG~g~a~~~e~  393 (394)
T 3ss6_A          371 -------------GLEKGIASLCVGGGIGVALFIEA  393 (394)
T ss_dssp             -------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred             -------------CCCEEEEEEccCcCceeEEEEEc
Confidence                         23578888888889999999984

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.97  E-value=4.3e-30  Score=286.91  Aligned_cols=242  Identities=15%  Similarity=0.133  Sum_probs=189.9

Q ss_pred             HHHHHHHHHHHHHHHcC----CCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CC
Q psy11396        202 QQRLFLQNCWTCIEDAG----YNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QG  275 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAG----l~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~G  275 (829)
                      ..+|+++++++||+|||    +++++++    +|++|+..+++.                  .+.++.+++..+|+  ++
T Consensus        35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id----~v~~g~~~~~~~------------------~~~~a~~va~~lGl~~~~   92 (393)
T 1afw_A           35 TDYLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNVGA------------------GATEHRAACLASGIPYST   92 (393)
T ss_dssp             HHHHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSBGG------------------GHHHHHHHHHHTTCCTTS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCHHHCC----EEEEEecCCCCC------------------CChHHHHHHHHcCCCCCc
Confidence            35699999999999999    9998888    788987654431                  24578899999999  79


Q ss_pred             cceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH------------H------------HHH------HH
Q psy11396        276 PCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI------------H------------IKM------SK  325 (829)
Q Consensus       276 p~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~------------~------------~~~------~~  325 (829)
                      |+++|+++|+|++.||++|+++|++|++|++||+|+|.++....            +            +..      .+
T Consensus        93 p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~  172 (393)
T 1afw_A           93 PFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAAN  172 (393)
T ss_dssp             CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHH
T ss_pred             eEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999997543111            0            000      00


Q ss_pred             ------------------------cCC---------------CCCCCC------------CCC-CCCCCCCcc-------
Q psy11396        326 ------------------------SGM---------------LSPDGH------------CYS-FDQRANGFV-------  346 (829)
Q Consensus       326 ------------------------~g~---------------ls~~~~------------~~p-fd~~~~G~~-------  346 (829)
                                              .|.               +++++.            ++| ||.++ |++       
T Consensus       173 ~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G~vt~~~~~~  251 (393)
T 1afw_A          173 FKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-GTTTAGNASQ  251 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCC
T ss_pred             hCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-CCeechhcCc
Confidence                                    011               223333            345 87654 665       


Q ss_pred             cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q psy11396        347 PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG  426 (829)
Q Consensus       347 ~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g  426 (829)
                      ++|||+++||+++++|+++|.+|+++|+|++.+++...     +.+.++.+++++||++||++|+||||||+|+++|.  
T Consensus       252 ~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~--  324 (393)
T 1afw_A          252 VSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPE-----IMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA--  324 (393)
T ss_dssp             BEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGG-----GGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH--
T ss_pred             ccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChh-----hcchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHH--
Confidence            89999999999999999999999999999999987432     22346789999999999999999999999999985  


Q ss_pred             ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396        427 DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK  479 (829)
Q Consensus       427 D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~  479 (829)
                        .|..++. .|+-   ...++++++.+..+|||+||+|+.++++++++|+++
T Consensus       325 --~~l~~~~-~lg~---~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~  371 (393)
T 1afw_A          325 --QALYCIH-KLGI---DLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD  371 (393)
T ss_dssp             --HHHHHHH-HHTC---CGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT
T ss_pred             --HHHHHHH-HhCC---CCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence              4666664 4552   123456666666799999999999999999999884

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.97  E-value=8.9e-30  Score=285.18  Aligned_cols=265  Identities=17%  Similarity=0.206  Sum_probs=213.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ...|+++++++||+|||+++++++    ++++|+...++.                  ....+.+++..+|+  ++|+++
T Consensus        29 ~~~L~~~a~~~Al~~agi~~~~Id----~v~~g~~~~~~~------------------~~~~a~~~~~~lGl~~~~p~~~   86 (395)
T 4e1l_A           29 AVQLGTIAVKEAISRVGLNLSEID----EVIIGNVLQTGL------------------GQNVARQIAINAGIPNSVPSYT   86 (395)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECCCCSST------------------TCCHHHHHHHHTTCCTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------cchHHHHHHHHcCCCCCceEEE
Confidence            356999999999999999999999    889986543321                  12467889999999  689999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHH-------------------------------------
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK-------------------------------------  322 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~-------------------------------------  322 (829)
                      |+++|+|++.||+.|+++|++|++|++||+|+|.++.......                                     
T Consensus        87 v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~  166 (395)
T 4e1l_A           87 VNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAEN  166 (395)
T ss_dssp             ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHH
Confidence            9999999999999999999999999999999998876432110                                     


Q ss_pred             -HH------------------------HcC-------------------CCCCCCCCCC-------------CCC-----
Q psy11396        323 -MS------------------------KSG-------------------MLSPDGHCYS-------------FDQ-----  340 (829)
Q Consensus       323 -~~------------------------~~g-------------------~ls~~~~~~p-------------fd~-----  340 (829)
                       ..                        ..|                   .+.++..+|+             |+.     
T Consensus       167 ~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t  246 (395)
T 4e1l_A          167 IATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVT  246 (395)
T ss_dssp             HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCB
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCee
Confidence             00                        000                   1233344432             432     


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG  420 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg  420 (829)
                      ..+++.++||++++||++++.|+++|++|+++|.|++.+++...     +.+.++.++++++|+++|++|+||||||+|.
T Consensus       247 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~ai~~al~~agl~~~dId~ve~~d  321 (395)
T 4e1l_A          247 AGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPE-----VMGTGPIPATRKALKKAGLSINDIDLIEANE  321 (395)
T ss_dssp             TTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGG-----GTTCTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred             CCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCC-----cchHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence            34678889999999999999999999999999999999876432     2233578899999999999999999999984


Q ss_pred             CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCC
Q psy11396        421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSP  500 (829)
Q Consensus       421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~  500 (829)
                      ++     .+|..++.+.|+-   ...++++++.|.++||++||||+.++++++++|+++                     
T Consensus       322 ~f-----a~~~~~~~~~lg~---~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~---------------------  372 (395)
T 4e1l_A          322 AF-----AAQALAVKNELQI---DSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR---------------------  372 (395)
T ss_dssp             SB-----HHHHHHHHHHHTC---CGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH---------------------
T ss_pred             hh-----HHHHHHHHHHhCC---CCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc---------------------
Confidence            43     2688888888874   235688999999999999999999999999999883                     


Q ss_pred             eeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        501 FFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       501 ~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                     ..++++++..+-||...++|||
T Consensus       373 ---------------~~~~gl~~~c~ggG~g~a~~~e  394 (395)
T 4e1l_A          373 ---------------KVETGLATLCIGGGQGISMVVS  394 (395)
T ss_dssp             ---------------TCSEEEEEEESSTTEEEEEEEE
T ss_pred             ---------------CCCEEEEEEccCCCceEEEEEe
Confidence                           2357888988889999999997

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.97  E-value=9.3e-30  Score=283.80  Aligned_cols=271  Identities=14%  Similarity=0.195  Sum_probs=209.2

Q ss_pred             HHHHHHHHHHHHHHHHc-CCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcc
Q psy11396        201 PQQRLFLQNCWTCIEDA-GYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPC  277 (829)
Q Consensus       201 ~~~~l~l~aa~~AL~dA-Gl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~  277 (829)
                      +.++|+++++++||+|| |+++++++    ++++|+..+++.                 .....+.+++..+|+  ++|+
T Consensus        26 ~~~~L~~~a~~~Al~~a~gi~~~~Id----~v~~g~~~~~~~-----------------~~~~~a~~~~~~~Gl~~~~p~   84 (387)
T 3goa_A           26 RAEDLSAHLMRSLLARNPSLTAATLD----DIYWGCVQQTLE-----------------QGFNIARNAALLAEIPHSVPA   84 (387)
T ss_dssp             CHHHHHHHHHHHHHHHCTTSCGGGCC----EEEEECSCCSBT-----------------TTTTHHHHHHHHTTCCTTSCC
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHcC----EEEEEcccCCcc-----------------cccHHHHHHHHHcCCCCCCcE
Confidence            35679999999999999 99999999    899987654331                 023457789999999  6899


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH-------------------------------------
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-------------------------------------  320 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-------------------------------------  320 (829)
                      ++|+++|+|++.||++|+++|++|++|++||+|+|.++.....                                     
T Consensus        85 ~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~  164 (387)
T 3goa_A           85 VTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREM  164 (387)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHH
T ss_pred             eEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHH
Confidence            9999999999999999999999999999999999987653210                                     


Q ss_pred             ----HHH--------HHcCC-------------------CCCCCCCCC-------------CCC------CCCCcccccc
Q psy11396        321 ----IKM--------SKSGM-------------------LSPDGHCYS-------------FDQ------RANGFVPGEG  350 (829)
Q Consensus       321 ----~~~--------~~~g~-------------------ls~~~~~~p-------------fd~------~~~G~~~gEG  350 (829)
                          ...        ...|.                   ++++..+|+             |+.      ..+++.++||
T Consensus       165 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dG  244 (387)
T 3goa_A          165 QDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDG  244 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEE
T ss_pred             HHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCcc
Confidence                000        00011                   233444443             554      2567889999


Q ss_pred             eEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396        351 VGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE  430 (829)
Q Consensus       351 aaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E  430 (829)
                      ++++||++++.|+++|++|+++|+|++.++++....     ..++.++++++|+++|++|+||||||+|++++..    +
T Consensus       245 aaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~did~ve~h~~f~~~----~  315 (387)
T 3goa_A          245 AAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIM-----GYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ----I  315 (387)
T ss_dssp             EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTST-----TCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHH----H
T ss_pred             EEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcc-----hHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchHH----H
Confidence            999999999999999999999999999998865432     2345889999999999999999999999888752    3


Q ss_pred             HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396        431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW  510 (829)
Q Consensus       431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~  510 (829)
                      ...+ +.++--.....++++++.+..+|||+||+|+.++++++++|+++                               
T Consensus       316 ~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------------------------  363 (387)
T 3goa_A          316 LPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK-------------------------------  363 (387)
T ss_dssp             HHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-------------------------------
T ss_pred             HHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc-------------------------------
Confidence            3333 34442111123466777777899999999999999999999872                               


Q ss_pred             cccccCccEEEEeccCCCCceEEEEeee
Q psy11396        511 DIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                           ..++++++..+-||...++|||.
T Consensus       364 -----~~~~gl~~~c~ggG~g~a~~~e~  386 (387)
T 3goa_A          364 -----DAQFGLATMCIGLGQGIATVFER  386 (387)
T ss_dssp             -----TCSEEEEEEEETTTEEEEEEEEC
T ss_pred             -----CCCEEEEEeccCcCceEEEEEEe
Confidence                 13567887777778899999984

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=99.96  E-value=3.1e-32  Score=303.03  Aligned_cols=189  Identities=16%  Similarity=0.160  Sum_probs=165.1

Q ss_pred             ccCCcccccccccccchhhhccc-ccceeeeeeC-CCCeeeccCChhhhhhhhccc-ccc--ccccccccc----ccCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSS-VQYKVIIITG-YENYFACGGTKEGLLKIQKGI-SRF--TDEKSYCMP----LYCKI  651 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d-~~vr~vVl~g-~g~~F~~G~D~~~~~~~~~~~-~~~--~~~~~~~~~----~~~~k  651 (829)
                      +.|++|.+|+.+|.++++.++.| +++|+|||+| .|+.||+|+|++++....... ..+  .....+..+    ..+||
T Consensus        51 k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~~~~~~~~~~~~~~~~l~~~L~~a~~~~pK  130 (556)
T 2w3p_A           51 KLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGL  130 (556)
T ss_dssp             CTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999 9999999999 899999999998875422110 000  011223344    56999


Q ss_pred             CEEEEecccccchhhhhhhcccccccccc--ceecccccc-ccccCCCcceeccc--cccCHHHHHHHHhcCCccCHHHH
Q psy11396        652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMR-YGFTPGAGSTLIFP--QRFGKILSREILFTASEFKGKEL  726 (829)
Q Consensus       652 p~Iaav~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~-~Gl~p~~g~~~~l~--r~iG~~~a~e~ll~g~~~~a~eA  726 (829)
                      ||||+|||+|+|||++|+++||+||++++  ++|++||++ +|++|++|++++|+  |++|..++++++++|+.|+++||
T Consensus       131 PVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EA  210 (556)
T 2w3p_A          131 KFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERA  210 (556)
T ss_dssp             EEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHH
T ss_pred             CEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCCCccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHH
Confidence            99999999999999999999999999999  999999999 99999999999999  99999999999999999999999


Q ss_pred             HHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy11396        727 KERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHS  770 (829)
Q Consensus       727 ~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~  770 (829)
                      +++||||+|+|++++.+++.+++++|+..+|.+++. |..++..
T Consensus       211 l~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~~-K~l~~~~  253 (556)
T 2w3p_A          211 KAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHA-QGVPLTR  253 (556)
T ss_dssp             HHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTTC-CCCCCCC
T ss_pred             HHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHhh-hhhhcch
Confidence            999999999999999999999999999999988764 6654433

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.96  E-value=5.4e-30  Score=279.59  Aligned_cols=249  Identities=18%  Similarity=0.158  Sum_probs=190.4

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCccee
Q psy11396        200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLA  279 (829)
Q Consensus       200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t  279 (829)
                      ++..+|+++|+++||+|||+++++++    ++++|+..+++.                  ....+.+++..+|+++|+++
T Consensus        48 ~~~~~la~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~------------------~~~~a~~v~~~lgl~~~~~~  105 (322)
T 1ub7_A           48 EYTSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDAL------------------FPDTAALVQARFGLKAFAYD  105 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEE------------------ESCHHHHHHHHTTCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCEEEe
Confidence            45788999999999999999988887    788887654321                  12367899999999999999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      |+++|+|++.||..|+++|++|++|.+||+|+|.+. +.                ..|+| +++|+++||||+++||++.
T Consensus       106 v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------------~~~~d-~~~~~~~GdGA~A~vL~~~  167 (322)
T 1ub7_A          106 LLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALS-KI----------------IDWND-RATAVLFGDGGGAAVVGKV  167 (322)
T ss_dssp             EECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GT----------------SCTTC-HHHHTTBCCEEEEEEEECC
T ss_pred             eCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhc-cc----------------cChhh-cccceeeccccEEEEEEec
Confidence            999999999999999999999999999999999853 21                12444 5679999999999999987


Q ss_pred             hhhhhCCCceEEEE-EEeeeecCCCCC---CCCCC-----------CH--------HHHHHHHHHHHHHcCCCCCCccEE
Q psy11396        360 KDAKKDGDDIYCII-KGWGVNQDGKTN---GITAP-----------NT--------KSQIRLQTKIYKKFNINPNDIQLL  416 (829)
Q Consensus       360 ~~A~~~g~~i~a~I-~g~~~~~dg~~~---~~~~p-----------~~--------~~~~~ai~~Al~~Agl~~~dId~v  416 (829)
                      +.    +.++++.+ .+.+...+..+.   +...|           ++        ..+.++++++|+++|++|+|||||
T Consensus       168 ~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~  243 (322)
T 1ub7_A          168 RE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLF  243 (322)
T ss_dssp             CT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred             CC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence            64    34566654 333322221110   00002           23        578899999999999999999999


Q ss_pred             EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396        417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL  496 (829)
Q Consensus       417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~  496 (829)
                      ++|+++++..|     ++.+.|+-.   ..+  +.+.|..+||+.+|++.+.+.++   ++++.+.              
T Consensus       244 ~~H~~~~~~~d-----~~~~~lg~~---~~~--~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~--------------  296 (322)
T 1ub7_A          244 VPHQANLRIID-----AARERLGLP---WER--VAVNVDRYGNTSTASIPLALKEA---VDAGRIR--------------  296 (322)
T ss_dssp             EECCSCHHHHH-----HHHHTTTCC---GGG--BCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC--------------
T ss_pred             EEcCCCHHHHH-----HHHHHcCCC---HHH--HHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC--------------
Confidence            99999998765     356666531   122  34678899999999999987765   4555442              


Q ss_pred             CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                         +.+++++++||+|++|+++||+.
T Consensus       297 -------------------~g~~~l~~~~G~G~~~~~~vl~~  319 (322)
T 1ub7_A          297 -------------------EGDHVLLVSFGAGLTWAAAVLTW  319 (322)
T ss_dssp             -------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred             -------------------CCCEEEEEEEChhheeEEEEEEe
Confidence                               12579999999999999999975

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.95  E-value=2.5e-28  Score=273.52  Aligned_cols=267  Identities=16%  Similarity=0.170  Sum_probs=198.6

Q ss_pred             HHHHHHHHHHHHHHH-cCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcce
Q psy11396        202 QQRLFLQNCWTCIED-AGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCL  278 (829)
Q Consensus       202 ~~~l~l~aa~~AL~d-AGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~  278 (829)
                      .+.|+.+++++||+| ||+++++++    ++++|+...++.                 ....++.+++..+|+  .+|++
T Consensus        32 ~~~L~~~A~~~AL~~~AGl~~~dId----~vi~g~~~~~~~-----------------~~~~~a~~va~~lGlp~~~pa~   90 (407)
T 3svk_A           32 PLNLVVGLVDELRRRYPDLDETLIS----DMILGVVSPVGD-----------------QGGDIARTAVLAAGLPETTGGV   90 (407)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCGGGEE----EEEEECC-------------------------CHHHHHHHHTTCCTTCEEE
T ss_pred             HHHHHHHHHHHHHhhhcCcCHHHCC----EEEEEecCcccc-----------------ccCcHHHHHHHHcCCCCCCceE
Confidence            467999999999999 999999998    888886543221                 123467889999999  68999


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--------------------HHHH--------------
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--------------------IKMS--------------  324 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--------------------~~~~--------------  324 (829)
                      +|+++|+|++.||+.|+++|++|++|++||+|+|.++.....                    ....              
T Consensus        91 ~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~  170 (407)
T 3svk_A           91 QLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSRED  170 (407)
T ss_dssp             EEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHH
T ss_pred             EecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHH
Confidence            999999999999999999999999999999999987752110                    0000              


Q ss_pred             ----------------HcC----------------CCCCCCCCCC-------------CCC-------------------
Q psy11396        325 ----------------KSG----------------MLSPDGHCYS-------------FDQ-------------------  340 (829)
Q Consensus       325 ----------------~~g----------------~ls~~~~~~p-------------fd~-------------------  340 (829)
                                      ..|                .+.++..+|+             |+.                   
T Consensus       171 ~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~  250 (407)
T 3svk_A          171 VDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVE  250 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCS
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccc
Confidence                            001                1334444443             442                   


Q ss_pred             -------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy11396        341 -------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDI  413 (829)
Q Consensus       341 -------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dI  413 (829)
                             ..+.+.++||++++||++++.|+++|.+++++|.|++.+++......     .+...+++++|+++|++|+||
T Consensus       251 ~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~-----~~~~~a~~~al~~Agl~~~dI  325 (407)
T 3svk_A          251 KINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIML-----TGPTPATRKVLDRAGLTIDDI  325 (407)
T ss_dssp             SCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CC-----CTHHHHHHHHHHHHTCCGGGC
T ss_pred             cccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcccc-----HHHHHHHHHHHHHcCCCHHHC
Confidence                   24667899999999999999999999999999999999877544322     234689999999999999999


Q ss_pred             cEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        414 QLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       414 d~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      ||||+|++++..    |...+ +.|+-   ...++++++.+..+|||+||+|+.++++++++|+++              
T Consensus       326 d~~e~hdaf~~~----~l~~~-~~lg~---~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~--------------  383 (407)
T 3svk_A          326 DLFELNEAFASV----VLKFQ-KDLNI---PDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR--------------  383 (407)
T ss_dssp             SEEEECCSBHHH----HHHHH-HHHTC---CGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH--------------
T ss_pred             CEEEEeChhHHH----HHHHH-HHhCC---CCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc--------------
Confidence            999999887643    44333 44542   234577788888899999999999999999999872              


Q ss_pred             CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                            ..++++++..+-||...++|||.
T Consensus       384 ----------------------~~~~gl~~~c~ggG~g~a~~~e~  406 (407)
T 3svk_A          384 ----------------------NARRALITLCIGGGMGVATIIER  406 (407)
T ss_dssp             ----------------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred             ----------------------CCCEEEEEeeccCcceEEEEEEc
Confidence                                  23678999999999999999984

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.95  E-value=1.8e-28  Score=265.88  Aligned_cols=244  Identities=18%  Similarity=0.249  Sum_probs=188.9

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cce
Q psy11396        200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCL  278 (829)
Q Consensus       200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~  278 (829)
                      ++..+|+++|+++||+|||+++++++    +|++|+..+++.                  ....+.+++..+|+++ |++
T Consensus        48 ~~~~~l~~~a~~~al~~ag~~~~~id----~v~~~~~~~~~~------------------~~~~a~~v~~~lgl~~~~~~  105 (309)
T 2ebd_A           48 ETITYMATQAAKEALREANLSPEELD----LIILATLTPQKR------------------FPSTACLVQAQLKAKGVYAF  105 (309)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSCSSS------------------SSCHHHHHHHHHTCTTCEEE
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCceEE
Confidence            56789999999999999999998888    899997654331                  1236789999999998 999


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK  358 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~  358 (829)
                      +|+++|+|++.||..|+++|++|++|.+||+|+|.+...           +       .|+...+|+++||||+++||++
T Consensus       106 ~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~-------~~~~~~~~~~~gdGaaA~vL~~  167 (309)
T 2ebd_A          106 DISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V-------DWEDRSTCVLFGDGAGAVVVTR  167 (309)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C-------CTTCTTTTTTBCEEEEEEEEEE
T ss_pred             ecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c-------CccchhhccccccccEEEEEEe
Confidence            999999999999999999999999999999999986421           1       1334568999999999999998


Q ss_pred             chhhhhCCCceEEEEEEeeeecCCCC-CCCCCC-------CHH--------HHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396        359 LKDAKKDGDDIYCIIKGWGVNQDGKT-NGITAP-------NTK--------SQIRLQTKIYKKFNINPNDIQLLEAHGTG  422 (829)
Q Consensus       359 ~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~p-------~~~--------~~~~ai~~Al~~Agl~~~dId~ve~hgtg  422 (829)
                      .+.+    ..+++.+    ..+++.. ..+..|       .+.        .+.++++++|+++|++|+|||||++|+++
T Consensus       168 ~~~~----~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~  239 (309)
T 2ebd_A          168 SEDK----SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQAN  239 (309)
T ss_dssp             CSSS----CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC
T ss_pred             cCCC----CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence            7653    2344443    3344421 112222       443        67889999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396        423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF  502 (829)
Q Consensus       423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~  502 (829)
                      ++..|     ++.+.|+-.   ..++  .+.|..+||+.+|++++.|.+++.   ++.+.                    
T Consensus       240 ~~~~~-----~~~~~lg~~---~~~~--~~~~~~~Gh~~~As~~~~L~~~~~---~g~~~--------------------  286 (309)
T 2ebd_A          240 VRIIN-----ALAEKLNIP---KEKV--FVNIQKYGNTSAASIPIALHEAIK---EGKVK--------------------  286 (309)
T ss_dssp             HHHHH-----HHHHHTTCC---GGGB--CCCHHHHCBCGGGHHHHHHHHHHH---TTCCC--------------------
T ss_pred             HHHHH-----HHHHHhCCC---HHHh--hhhHhhhcchHHHHHHHHHHHHHH---cCCCC--------------------
Confidence            97644     456777631   1223  356889999999999999987743   33221                    


Q ss_pred             eccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                   +..++++.+||.|.+..+++|+
T Consensus       287 -------------~G~~~l~~~~G~G~~~~~~~l~  308 (309)
T 2ebd_A          287 -------------RGDLILMTAMGGGLTWGAVLLR  308 (309)
T ss_dssp             -------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             -------------CCCEEEEEEEchhhhhEEEEEE
Confidence                         1246899999999999999986

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.95  E-value=1.7e-28  Score=267.13  Aligned_cols=292  Identities=14%  Similarity=0.161  Sum_probs=212.1

Q ss_pred             CEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        116 DIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       116 ~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++.|+|+|+.+|.. .+.+++++.+.  .      + ..|-                .              ..+||..+
T Consensus         2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~------~-~~~i----------------~--------------~~~Gi~~r   42 (317)
T 1hnj_A            2 YTKIIGTGSYLPEQVRTNADLEKMVD--T------S-DEWI----------------V--------------TRTGIRER   42 (317)
T ss_dssp             EEEEEEEEEECCSEEEEHHHHHTTSS--C------C-HHHH----------------H--------------HHHCCCEE
T ss_pred             CcEEEEEEEeCCCceecHHHHHHHhC--C------C-HHHH----------------H--------------HHhCceEE
Confidence            47899999999985 67888875321  0      0 0110                0              01123222


Q ss_pred             Hhh-cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EAE-YMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~~-~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      ... ..++..+|+++|+++||+|||+++++++    +|++|+..+++.                  ....+.+++..+|+
T Consensus        43 ~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id----~vi~g~~~~~~~------------------~~~~a~~v~~~lgl  100 (317)
T 1hnj_A           43 HIAAPNETVSTMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHA------------------FPSAACQIQSMLGI  100 (317)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCS------------------SSCHHHHHHHHHTC
T ss_pred             EecCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCC
Confidence            211 3456889999999999999999999888    889987654321                  12468899999999


Q ss_pred             C-CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceE
Q psy11396        274 Q-GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG  352 (829)
Q Consensus       274 ~-Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaa  352 (829)
                      + +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+....                  .|+.+.+|+++||||+
T Consensus       101 ~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------------~~~d~~~~~~~GdGA~  162 (317)
T 1hnj_A          101 KGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTC------------------DPTDRGTIIIFGDGAG  162 (317)
T ss_dssp             CSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHS------------------CTTCHHHHTTBCCEEE
T ss_pred             CCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC------------------CchhcccceeeccccE
Confidence            7 89999999999999999999999999999999999999753210                  1222345899999999


Q ss_pred             EEEEccchhhhhCCCceEEEEEE-eeeecCCCCCC-----------CCCCCHH--------HHHHHHHHHHHHcCCCCCC
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKG-WGVNQDGKTNG-----------ITAPNTK--------SQIRLQTKIYKKFNINPND  412 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g-~~~~~dg~~~~-----------~~~p~~~--------~~~~ai~~Al~~Agl~~~d  412 (829)
                      ++||++.+.     ..+++.+.+ .+...+..+..           ...+++.        .+.++++++|+++|++++|
T Consensus       163 A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~d  237 (317)
T 1hnj_A          163 AAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQ  237 (317)
T ss_dssp             EEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred             EEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence            999998753     357777654 22212211100           0113344        6789999999999999999


Q ss_pred             ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396        413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE  492 (829)
Q Consensus       413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~  492 (829)
                      ||||++|+++++..|     ++.+.|+-.   ..  .+.+.|+.+||+.+|++.+.|..++   +.+.+.|         
T Consensus       238 id~v~~H~~~~~~~d-----~i~~~lg~~---~~--~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~~---------  295 (317)
T 1hnj_A          238 LDWLVPHQANLRIIS-----ATAKKLGMS---MD--NVVVTLDRHGNTSAASVPCALDEAV---RDGRIKP---------  295 (317)
T ss_dssp             CCEEEECCSCHHHHH-----HHHHHTTCC---GG--GBCCCHHHHCBCGGGHHHHHHHHHH---HTTCSCT---------
T ss_pred             CCEEEEcCCCHHHHH-----HHHHHcCCC---HH--HhHhhHhhhCcHHHHHHHHHHHHHH---HhCCCCC---------
Confidence            999999999998765     456777631   11  2457899999999999998887663   4433221         


Q ss_pred             cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                              ..++++.+||.|.+..+++|+
T Consensus       296 ------------------------G~~vll~~~G~G~t~~~~~l~  316 (317)
T 1hnj_A          296 ------------------------GQLVLLEAFGGGFTWGSALVR  316 (317)
T ss_dssp             ------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred             ------------------------CCEEEEEEEchhheeEEEEEE
Confidence                                    246899999999999988886

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.94  E-value=9.7e-28  Score=263.53  Aligned_cols=296  Identities=14%  Similarity=0.171  Sum_probs=210.9

Q ss_pred             CCCCEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396        113 NNDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI  191 (829)
Q Consensus       113 ~~~~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i  191 (829)
                      ...++.|+|+|+.+|.. .+.+++|+.+..        + .+|-.                              ..+||
T Consensus         8 ~~~~~~I~gig~~~P~~~~~~~~~~~~~~~--------~-~~~i~------------------------------~~~Gi   48 (339)
T 1mzj_A            8 ERRFSRVLGVGSYRPRREVSNKEVCTWIDS--------T-EEWIE------------------------------TRTGI   48 (339)
T ss_dssp             CCCEEEEEEEEEECCSCEEEHHHHTTTSSC--------C-HHHHH------------------------------HHHCC
T ss_pred             ccCceEEEEEEEeCCCccccHHHHHHHhCC--------C-HHHHH------------------------------HhcCc
Confidence            34679999999999996 678888754321        0 11100                              01122


Q ss_pred             CHHHhh-cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        192 SPSEAE-YMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       192 ~p~~~~-~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      ..+... ..++..+|+++|+++||+|||+++++++    +|++|+..+++.                  ....+.+++..
T Consensus        49 ~~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~gt~~~~~~------------------~p~~a~~v~~~  106 (339)
T 1mzj_A           49 RSRRIAEPDETIQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVH------------------TPPLSVAIAHE  106 (339)
T ss_dssp             SEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCC------------------SSCHHHHHHHH
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC------------------CChHHHHHHHH
Confidence            222211 2356789999999999999999999988    899998765431                  11267899999


Q ss_pred             ccCC-CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccccc
Q psy11396        271 LNLQ-GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGE  349 (829)
Q Consensus       271 lgl~-Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gE  349 (829)
                      ||++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+. +.          +.       ++...+|+++||
T Consensus       107 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~~-------~~d~~~~~~~Gd  168 (339)
T 1mzj_A          107 LGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------ID-------LADRSLSFLFGD  168 (339)
T ss_dssp             HTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------SC-------SSCTTTTTTBCE
T ss_pred             hCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------cC-------ccccccceEecc
Confidence            9998 79999999999999999999999999999999999999864 22          11       123467999999


Q ss_pred             ceEEEEEccchhhhhCCCceEEEE-EEeeeecCCCCCCCCCC---------------CH--------HHHHHHHHHHHHH
Q psy11396        350 GVGVLMLKKLKDAKKDGDDIYCII-KGWGVNQDGKTNGITAP---------------NT--------KSQIRLQTKIYKK  405 (829)
Q Consensus       350 GaaalvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~~~p---------------~~--------~~~~~ai~~Al~~  405 (829)
                      ||+++||++.+.     .++++.. .+.+...+..+.....|               .+        ..+.++++++|++
T Consensus       169 GA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~  243 (339)
T 1mzj_A          169 GAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEV  243 (339)
T ss_dssp             EEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998753     2344332 22222111111000001               12        5678899999999


Q ss_pred             cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCC-ccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCC
Q psy11396        406 FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKN-FCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPT  484 (829)
Q Consensus       406 Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~-~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~  484 (829)
                      +|++++|||||++|+++++.+|.     +.+.|+-.   .. +++ . ...++||+.+|++.+.|.+++   +.+.+.  
T Consensus       244 agl~~~did~v~~H~~~~~~~d~-----i~~~lg~~---~~~~~~-~-~~~~~Gn~~sAs~~~~L~~~~---~~g~~~--  308 (339)
T 1mzj_A          244 AGLTVGDLVAFVPHQANLRIIDV-----LVDRLGVP---EHVVVS-R-DAEDTGNTSSASVALALDRLV---RSGAVP--  308 (339)
T ss_dssp             TTCCGGGCSEEEECCSCHHHHHH-----HHHHHTCC---TTSEEC-C-THHHHCBCTTHHHHHHHHHHH---HHTSSC--
T ss_pred             cCCCHHHCCEEEECCCCHHHHHH-----HHHHhCCC---ccceee-e-hhhhcCchHHHHHHHHHHHHH---HcCCCC--
Confidence            99999999999999999998774     45666531   22 333 2 246799999999999877664   443221  


Q ss_pred             CCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        485 INYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                     +..++++.+||.|.+.++++|+-
T Consensus       309 -------------------------------~G~~vll~~~G~G~t~~~~~l~~  331 (339)
T 1mzj_A          309 -------------------------------GGGPALMIGFGAGLSYAGQALLL  331 (339)
T ss_dssp             -------------------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred             -------------------------------CCCEEEEEEEchhheeEEEEEEe
Confidence                                           12468999999999999999975

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.94  E-value=1.6e-27  Score=258.84  Aligned_cols=249  Identities=16%  Similarity=0.189  Sum_probs=186.7

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccce
Q psy11396        200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCL  278 (829)
Q Consensus       200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~  278 (829)
                      .+..+|+++|+++||+|||+++++++    ++++|+..+++.                  ....+.+++..+|++ +|++
T Consensus        49 ~~~~~l~~~a~~~al~~ag~~~~~id----~vi~~~~~~~~~------------------~~~~a~~v~~~lgl~~~~~~  106 (313)
T 1zow_A           49 QDTSDLAYEASVKAIADAGIQPEDID----MIIVATATGDMP------------------FPTVANMLQERLGTGKVASM  106 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS------------------SSCHHHHHHHHHTCCSCCEE
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCcEE
Confidence            34678999999999999999998888    899997654431                  113578999999998 6999


Q ss_pred             eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396        279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK  358 (829)
Q Consensus       279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~  358 (829)
                      +|+++|+|++.||..|+++|++|++|.+||+|+|.+....                 +|+|. .+|+++||||+++||++
T Consensus       107 ~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~-----------------~~~d~-~~~~~~gdGa~A~vl~~  168 (313)
T 1zow_A          107 DQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT-----------------DLTDR-STAVLFGDGAGAVIIGE  168 (313)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC-----------------CTTCH-HHHTTBCEEEEEEEEEE
T ss_pred             EECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc-----------------Ccccc-cceeeeccceEEEEEEe
Confidence            9999999999999999999999999999999999864321                 34443 36899999999999998


Q ss_pred             chhhhhCCCceEEE-EEEeeeecCCCCCCC----CCCCH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396        359 LKDAKKDGDDIYCI-IKGWGVNQDGKTNGI----TAPNT--------KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL  425 (829)
Q Consensus       359 ~~~A~~~g~~i~a~-I~g~~~~~dg~~~~~----~~p~~--------~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~  425 (829)
                      .+.    +.++++. +.+.+...+..+...    ..+++        ..+.++++++|+++|++++|||||++|+++++.
T Consensus       169 ~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~  244 (313)
T 1zow_A          169 VSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI  244 (313)
T ss_dssp             CST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH
T ss_pred             cCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH
Confidence            764    2345543 333222222111000    01122        367889999999999999999999999999988


Q ss_pred             CChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecc
Q psy11396        426 GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT  505 (829)
Q Consensus       426 gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~  505 (829)
                      .|.+     .+.|+-.   .+.++  ..|..+||+.+|++...|..++   +++.+.                       
T Consensus       245 ~d~~-----~~~lg~~---~~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~~-----------------------  288 (313)
T 1zow_A          245 MESA-----RERLGIS---KDKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKLK-----------------------  288 (313)
T ss_dssp             HHHH-----HHHHTCC---GGGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCCC-----------------------
T ss_pred             HHHH-----HHHhCCC---HHHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCCC-----------------------
Confidence            7764     4556521   22233  3588999999999999987764   333221                       


Q ss_pred             ccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        506 KCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       506 ~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                +..++++.+||.|.+.+++||+-
T Consensus       289 ----------~g~~vl~~~~G~G~t~~~~~l~~  311 (313)
T 1zow_A          289 ----------DDDTIVLVGFGGGLTWGAMTIKW  311 (313)
T ss_dssp             ----------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred             ----------CCCEEEEEEEchhhhheEEEEEe
Confidence                      12568999999999999999973

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.93  E-value=6.8e-26  Score=247.95  Aligned_cols=290  Identities=15%  Similarity=0.211  Sum_probs=207.6

Q ss_pred             CEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        116 DIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       116 ~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++.|+|+|+.+|.. .+.+++|+.+...         .+|-.                              ..+||..+
T Consensus         5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~---------~~~i~------------------------------~~~Gi~~R   45 (331)
T 2x3e_A            5 AAVVCGLGSYLPEAVLSNDMLAAELDTS---------DAWIS------------------------------SRTGVRQR   45 (331)
T ss_dssp             EEEEEEEEEECCSCEEEHHHHHHHTTCC---------HHHHH------------------------------HHHCCCEE
T ss_pred             eeEEEEEEEECCCcEecHHHHHHHhCCC---------HHHHH------------------------------HhhCceEE
Confidence            58999999999985 6888888765311         11210                              00122222


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ  274 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~  274 (829)
                      .....++..+|+++|+++||+|||+  ++++    ++++|+..+++.                  ....+.+++..||++
T Consensus        46 ~~~~~~~~~~la~~Aa~~al~~ag~--~~id----~vi~~t~~~~~~------------------~p~~a~~v~~~lgl~  101 (331)
T 2x3e_A           46 HIAGDLGSGDLALRAASAALASAGL--ERVD----AVVLATSTGDFC------------------CPATAPRVAARLGLV  101 (331)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHHHTC--SCCS----EEEEECSSCSEE------------------ESCSHHHHHHHTTCT
T ss_pred             EecCCCCHHHHHHHHHHHHHHhCCc--ccCC----EEEEEeCCCCCC------------------CChHHHHHHHHhCCC
Confidence            2111156889999999999999999  6666    788887654431                  113578999999998


Q ss_pred             -CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396        275 -GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV  353 (829)
Q Consensus       275 -Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa  353 (829)
                       +|+++|+++|+|++.||..|+++|++|.+|.+||+|+|.+. +.          +.       |+...+++++||||++
T Consensus       102 ~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------~~-------~~d~~~~~~~GdGA~A  163 (331)
T 2x3e_A          102 GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HT----------LD-------PADRSTRALFGDGAGA  163 (331)
T ss_dssp             TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GG----------SC-------TTCHHHHHHBCCEEEE
T ss_pred             CCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cC----------CC-------ccccccceeeccccEE
Confidence             89999999999999999999999999999999999999853 21          01       1223468999999999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCCCC-CCCCC------------------CH--------HHHHHHHHHHHHHc
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN-GITAP------------------NT--------KSQIRLQTKIYKKF  406 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~-~~~~p------------------~~--------~~~~~ai~~Al~~A  406 (829)
                      +||++.+.|  ++.++++.    ...+++... .+..|                  .+        ..+.++++++|+++
T Consensus       164 ~vL~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~a  237 (331)
T 2x3e_A          164 VVLRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRV  237 (331)
T ss_dssp             EEEEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHc
Confidence            999988765  34455543    333343211 11111                  22        56788999999999


Q ss_pred             CCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCC
Q psy11396        407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTIN  486 (829)
Q Consensus       407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~  486 (829)
                      |++++|||||.+|+++++..|.     +.+.|+-   ..+.++.  ....+||+.+|+..+.|..+   ++.+.+.    
T Consensus       238 gl~~~did~~~~H~~~~~~~d~-----~~~~lg~---~~~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~~----  300 (331)
T 2x3e_A          238 GWQASDLHHLVPHQANTRILAA-----VADQLDL---PVERVVS--NIAEVGNTVAASIPLALAHG---LRQGILR----  300 (331)
T ss_dssp             TCCGGGCSEEEECCCCHHHHHH-----HHHHHTC---CGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCSC----
T ss_pred             CCCHHHCCEEEEcCCCHHHHHH-----HHHHcCC---CHHHHhh--hHhhhCcHHHHHHHHHHHHH---HHhCCCC----
Confidence            9999999999999999987665     4556653   1223333  34689999999988877655   3443221    


Q ss_pred             CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                   +..++++.+||.|.+..+++|+-
T Consensus       301 -----------------------------~G~~vll~~~G~G~~~~~~~l~~  323 (331)
T 2x3e_A          301 -----------------------------DGGNMVLTGFGAGLTWGSVALRW  323 (331)
T ss_dssp             -----------------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred             -----------------------------CCCEEEEEEEeHHhhheeeEEEE
Confidence                                         12468999999999999999975

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.92  E-value=6.5e-26  Score=248.63  Aligned_cols=295  Identities=14%  Similarity=0.202  Sum_probs=205.3

Q ss_pred             CCEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        115 DDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       115 ~~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .++.|+|+|+.+|.. .+.+++|+.+..        + .+|-                              ..++||..
T Consensus        11 ~~~~I~g~g~~~P~~~~~~~~~~~~~~~--------~-~~~i------------------------------~~~~gi~~   51 (335)
T 1u6e_A           11 RSVGLLSVGAYRPERVVTNDEICQHIDS--------S-DEWI------------------------------YTRTGIKT   51 (335)
T ss_dssp             SCEEEEEEEEECCSEEEEHHHHTTSSSC--------C-HHHH------------------------------HHHHCCSE
T ss_pred             CceEEEEEEEECCCceecHHHHHHHhCC--------C-HHHH------------------------------HHhcCCce
Confidence            579999999999985 678888753311        0 1110                              01122332


Q ss_pred             HHhh-cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhcc
Q psy11396        194 SEAE-YMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLN  272 (829)
Q Consensus       194 ~~~~-~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  272 (829)
                      +... ..++..+|+++|+++||+|||+++++++    +|++|+..++|.                  ....+.+++..||
T Consensus        52 r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id----~vi~~t~~~~~~------------------~~~~a~~v~~~lg  109 (335)
T 1u6e_A           52 RRFAADDESAASMATEACRRALSNAGLSAADID----GVIVTTNTHFLQ------------------TPPAAPMVAASLG  109 (335)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCS------------------SSCHHHHHHHHHT
T ss_pred             EeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHhC
Confidence            2221 1356789999999999999999999988    899997765442                  1246789999999


Q ss_pred             CC-CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccce
Q psy11396        273 LQ-GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV  351 (829)
Q Consensus       273 l~-Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGa  351 (829)
                      ++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+..                 ...|+| ..+++++||||
T Consensus       110 l~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-----------------~~~~~d-~~~~~~~gDGA  171 (335)
T 1u6e_A          110 AKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-----------------TIDMYD-RGNCFIFADGA  171 (335)
T ss_dssp             CTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-----------------GCCTTC-TTTTTTBCEEE
T ss_pred             CCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-----------------ccCccc-cccceEecccc
Confidence            98 699999999999999999999999999999999999998642                 123444 35899999999


Q ss_pred             EEEEEccchhhhhCCCceEEEEEEe-eeecCCCCCC---------------CCCCC--------HHHHHHHHHHHHHHcC
Q psy11396        352 GVLMLKKLKDAKKDGDDIYCIIKGW-GVNQDGKTNG---------------ITAPN--------TKSQIRLQTKIYKKFN  407 (829)
Q Consensus       352 aalvL~~~~~A~~~g~~i~a~I~g~-~~~~dg~~~~---------------~~~p~--------~~~~~~ai~~Al~~Ag  407 (829)
                      +++||++.+.   ++  ++.++.+. +...+.....               ....+        ...+.++++++|+++|
T Consensus       172 ~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ag  246 (335)
T 1u6e_A          172 AAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAG  246 (335)
T ss_dssp             EEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999998764   22  33333322 1111100000               00111        2367889999999999


Q ss_pred             CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCC
Q psy11396        408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY  487 (829)
Q Consensus       408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~  487 (829)
                      ++++|||||++|+++++..|.     +.+.|+-..  ...++  ..+..+||+.+|+....|..+   ++.+.+      
T Consensus       247 l~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~--~~~~~--~~~~~~Gnt~sAs~~~~L~~~---~~~~~~------  308 (335)
T 1u6e_A          247 VRPDQIDVFVPHQANSRINEL-----LVKNLQLRP--DAVVA--NDIEHTGNTSAASIPLAMAEL---LTTGAA------  308 (335)
T ss_dssp             CCGGGCCEEEECCSCHHHHHH-----HHHHHTCCT--TCEEC--CTHHHHCBCGGGHHHHHHHHH---HHHTSS------
T ss_pred             CCHHHCCEEEECCCCHHHHHH-----HHHHcCCCc--hhhhh--hhhhhhCcHHHHHHHHHHHHH---HHcCCC------
Confidence            999999999999999987665     445565311  11222  235788999999965433332   222211      


Q ss_pred             CCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        488 NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       488 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                 .+.+++++++||+|++++++||+-
T Consensus       309 ---------------------------~~g~~~l~~~~G~G~t~~~~vl~~  332 (335)
T 1u6e_A          309 ---------------------------KPGDLALLIGYGAGLSYAAQVVRM  332 (335)
T ss_dssp             ---------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred             ---------------------------CCCCEEEEEEEehhheeEEEEEEe
Confidence                                       113579999999999999999985

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.92  E-value=5.5e-26  Score=253.41  Aligned_cols=319  Identities=11%  Similarity=0.074  Sum_probs=222.9

Q ss_pred             EEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHHH
Q psy11396        117 IAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSE  195 (829)
Q Consensus       117 IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~  195 (829)
                      +.|+|+|+.+|. -.+.+++|+.+....   .+.|..+|... ++    ...|.   +.-.+..+.+.|+ .+|++++++
T Consensus        10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~-i~----~~~GI---~~R~~~~~~~~~~-~~~~~~~r~   77 (382)
T 1u0m_A           10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALR-LI----ENTGV---RTRHIVQPIEDTL-EHPGFEDRN   77 (382)
T ss_dssp             CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHH-HH----HHTCC---CEEEESSCHHHHT-SCCCHHHHH
T ss_pred             eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHH-HH----HhcCC---CcceeecChhhhc-cCCChhHHH
Confidence            689999999998 478999998875432   12222222100 00    01111   1111222223454 456788888


Q ss_pred             hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC
Q psy11396        196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG  275 (829)
Q Consensus       196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G  275 (829)
                      ....++..+|+++|+++||+|||+++++++    ++++++..+ +.                  ....+.+|+..||+++
T Consensus        78 ~~~~~~~~~la~~Aa~~aL~~agl~~~~id----~vi~~t~~~-~~------------------~p~~a~~v~~~lGl~~  134 (382)
T 1u0m_A           78 KVYEREAKSRVPAVIQRALDDAELLATDID----VIIYVSCTG-FM------------------MPSLTAWLINEMGFDS  134 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-CC------------------SSCHHHHHHHHTTCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEecCC-CC------------------CCcHHHHHHHHhCCCC
Confidence            888888999999999999999999999887    788886543 10                  1236789999999998


Q ss_pred             --cceee-ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC----Ccccc
Q psy11396        276 --PCLAI-DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN----GFVPG  348 (829)
Q Consensus       276 --p~~tv-~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~----G~~~g  348 (829)
                        |+++| +++|+|++.||..|+++|++|.+|.+||+|+|.++..                 .+|+|.+++    ++++|
T Consensus       135 ~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------~~~~d~~~~~~~~~~lfG  197 (382)
T 1u0m_A          135 TTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLC-----------------YQPTDLGVGSLLCNGLFG  197 (382)
T ss_dssp             TCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGG-----------------CCTTCCSHHHHHHHHHBC
T ss_pred             CcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchh-----------------cCcccCCHHHhhccchhc
Confidence              88999 9999999999999999999999999999999986421                 134554433    89999


Q ss_pred             cceEEEEEccchhhhhCCCceEEEEEEeee--ecCCCC--------------CCCCCC--CHHHHHHHHHHHHHHcCCCC
Q psy11396        349 EGVGVLMLKKLKDAKKDGDDIYCIIKGWGV--NQDGKT--------------NGITAP--NTKSQIRLQTKIYKKFNINP  410 (829)
Q Consensus       349 EGaaalvL~~~~~A~~~g~~i~a~I~g~~~--~~dg~~--------------~~~~~p--~~~~~~~ai~~Al~~Agl~~  410 (829)
                      |||+|+||++.+.   +|.    .|.++..  ..++..              .+...|  ....+. +++++|+++|+++
T Consensus       198 DGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~  269 (382)
T 1u0m_A          198 DGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDA  269 (382)
T ss_dssp             EEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCS
T ss_pred             CCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCH
Confidence            9999999997653   333    3444333  233321              001112  246677 9999999999999


Q ss_pred             CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCC
Q psy11396        411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI  489 (829)
Q Consensus       411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~  489 (829)
                      +|||||++|+++++..|.     +.+.++-   ....+++ .+.+..+||+.+|+..+.|..++   +.+.+.+      
T Consensus       270 ~dId~v~~H~~~~~i~d~-----~~~~lgl---~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~~------  332 (382)
T 1u0m_A          270 SDLDFYIVHAGGPRILDD-----LSTFLEV---DPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVEE------  332 (382)
T ss_dssp             SCCSCCEEECSHHHHHHH-----HHHHSCS---CGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCCS------
T ss_pred             HHCCEEEECCCCHHHHHH-----HHHHcCC---CHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCCC------
Confidence            999999999999987654     4455542   1223333 24567899999999888877664   3432211      


Q ss_pred             CCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       490 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                                                 ..++++.+||.|.+.++++|+-.
T Consensus       333 ---------------------------Gd~vll~~~G~G~t~~~~vl~~~  355 (382)
T 1u0m_A          333 ---------------------------GARGLLAGFGPGITAEMSLGCWQ  355 (382)
T ss_dssp             ---------------------------SCCCEEEEEETTTEEEEEEEEEE
T ss_pred             ---------------------------CCEEEEEEEcccceeEEEEEEEe
Confidence                                       23578899999999999999763

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.91  E-value=4.4e-25  Score=245.69  Aligned_cols=325  Identities=11%  Similarity=0.075  Sum_probs=223.2

Q ss_pred             CCEEEEecccccCCC-CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        115 DDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       115 ~~IaItG~g~~~p~g-~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      .+|.|+|+|+.+|.. .+.+++|+.+....+  .+.+..+|... .+    ...|. ..++. ..++ ..||+.+|++++
T Consensus        12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~-i~----~~~Gi-~~R~~-~~~~-~~~~~~~~~~~~   81 (374)
T 2h84_A           12 NNSFVLGIGISVPGEPISQQSLKDSISNDFS--DKAETNEKVKR-IF----EQSQI-KTRHL-VRDY-TKPENSIKFRHL   81 (374)
T ss_dssp             CCCEEEEEEEECSSSCEEHHHHHHHHHHHSC--SCHHHHHHHHH-HH----HTTCC-CEECC-SSCT-TSGGGCGGGGGG
T ss_pred             CCeEEEEEEEeCCCcccCHHHHHHHHHHhhc--cChHHHHHHHH-HH----HhCCc-Cccee-ecCc-cccccccccCCh
Confidence            479999999999985 789999998864321  01111122110 00    00010 01110 1122 247888888888


Q ss_pred             HHhhcC-----CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396        194 SEAEYM-----DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS  268 (829)
Q Consensus       194 ~~~~~~-----d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  268 (829)
                      .+...+     ++..+|+++|+++||++||+++++++    ++++++..+ +                  .....+.+|+
T Consensus        82 ~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~~t~~~-~------------------~~p~~a~~v~  138 (374)
T 2h84_A           82 ETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT----HIVSVTSTG-I------------------IIPDVNFKLI  138 (374)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C------------------CSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-C------------------CCCcHHHHHH
Confidence            887777     88999999999999999999999998    788886542 1                  0123678999


Q ss_pred             hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCC--CC
Q psy11396        269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQR--AN  343 (829)
Q Consensus       269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~--~~  343 (829)
                      ..||+++  |++.|+ ++|+|++.||..|+++|++|.++.+||+|+|.++...          .      .|.|.+  .+
T Consensus       139 ~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~----------~------~~~dr~~~~~  202 (374)
T 2h84_A          139 DLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHF----------S------NTDGGDQMVA  202 (374)
T ss_dssp             HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGC----------C------CSSSHHHHHH
T ss_pred             HHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhh----------c------CCCCHHHHhh
Confidence            9999997  889996 8999999999999999999999999999999864210          0      122221  14


Q ss_pred             CcccccceEEEEEccchhhhhCCCceEEEEEEeeeec--CCCC--------CC------CCCCC--HHHHHHHHHHHHHH
Q psy11396        344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQ--DGKT--------NG------ITAPN--TKSQIRLQTKIYKK  405 (829)
Q Consensus       344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~--dg~~--------~~------~~~p~--~~~~~~ai~~Al~~  405 (829)
                      ++++||||+|+||++.+.+..++  ++ ++.+.+...  ++..        .+      ...|.  ...+.++++++|++
T Consensus       203 ~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~  279 (374)
T 2h84_A          203 SSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDK  279 (374)
T ss_dssp             HHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHh
Confidence            78999999999999887654333  44 666655431  1110        00      11111  34678899999999


Q ss_pred             cC------CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhc
Q psy11396        406 FN------INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKH  478 (829)
Q Consensus       406 Ag------l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~  478 (829)
                      +|      ++++||||| +|+++++..|.+     .+.++-   ....++++ .+...+||+.+|+-...|..++   +.
T Consensus       280 ag~~~~~~l~~~did~~-~H~~~~~i~d~~-----~~~lgl---~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~---~~  347 (374)
T 2h84_A          280 AKLQTSTAISAKDCEFL-IHTGGKSILMNI-----ENSLGI---DPKQTKNTWDVYHAYGNMSSASVIFVMDHAR---KS  347 (374)
T ss_dssp             HTTTSCSCCCSSSSEEE-ECCCCHHHHHHH-----HHHTTC---CGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH---TC
T ss_pred             cCCccccCCChhhcCEe-ECCCCHHHHHHH-----HHHcCC---CHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---hh
Confidence            99      999999999 999999876543     445542   22334432 4456789999999777776654   23


Q ss_pred             CCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        479 KVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       479 ~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                      +.                                   ...++++.+||.|-+-++++|+.
T Consensus       348 ~~-----------------------------------~Gd~vll~~~G~G~t~~~~ll~~  372 (374)
T 2h84_A          348 KS-----------------------------------LPTYSISLAFGPGLAFEGCFLKN  372 (374)
T ss_dssp             SC-----------------------------------CCSEEEEEEEETTTEEEEEEEEE
T ss_pred             cC-----------------------------------CCCeEEEEEeccchhhhhhhhee
Confidence            21                                   12458899999998888888874

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.86  E-value=1.3e-22  Score=253.44  Aligned_cols=277  Identities=11%  Similarity=0.041  Sum_probs=195.6

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..++.+.++....|+++|+++||+|||+++++++    .+++++..+ +                  .....+..|+..
T Consensus       678 ~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId----~ii~~t~~~-~------------------~~p~~a~~v~~~  734 (979)
T 3tsy_A          678 LNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT----HLVFCTTSG-V------------------EMPGADYKLANL  734 (979)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C------------------CSSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEeeCC-C------------------CCCcHHHHHHHH
Confidence            56666666677888999999999999999999998    788876321 1                  123568899999


Q ss_pred             ccCCCcc---eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGPC---LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp~---~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ||++++.   +.++++|+|++.||..|+++|++|.++.|||+|+|.+....            .......++...+++++
T Consensus       735 lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~------------~~~~~~~~~~~~~~~lf  802 (979)
T 3tsy_A          735 LGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF------------RGPSEDALDSLVGQALF  802 (979)
T ss_dssp             HTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC------------CCCCSSCHHHHHHHHHB
T ss_pred             cCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe------------eCCCccCHHHHhhhhhc
Confidence            9998754   89999999999999999999999999999999999742211            00111112222345789


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCC----------------HHHHHHHHHHHHHHcCCCCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPN----------------TKSQIRLQTKIYKKFNINPN  411 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~----------------~~~~~~ai~~Al~~Agl~~~  411 (829)
                      ||||+|+||++.+.+..++..++....+.....+..+.....+.                .....++++++|+++|++++
T Consensus       803 GDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~  882 (979)
T 3tsy_A          803 GDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDW  882 (979)
T ss_dssp             CCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCG
T ss_pred             cCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence            99999999999887766777888877777665544322111110                23367899999999999999


Q ss_pred             CccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy11396        412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL  490 (829)
Q Consensus       412 dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~  490 (829)
                      ||||+++|.+++...|.+     .+.++-   ..+.+..+ ..-..+||+.+||=.+.|..+...++.|..         
T Consensus       883 did~~~~Hq~~~~i~~~~-----~~~lgl---~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~---------  945 (979)
T 3tsy_A          883 NSLFWIAHPGGPAILDAV-----EAKLNL---DKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER---------  945 (979)
T ss_dssp             GGSEEEECCSCHHHHHHH-----HHHHTC---CTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTC---------
T ss_pred             ccceEEECCCChHHHHHH-----HHHcCC---ChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhccccc---------
Confidence            999999999887764443     444441   12222221 113456999999988888776654443311         


Q ss_pred             CccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        491 NEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       491 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                         +                 .........+..+||.|-+.++++|+--
T Consensus       946 ---v-----------------~~g~~~~~~ll~~~G~G~t~~~~~l~~~  974 (979)
T 3tsy_A          946 ---A-----------------TTGEGLDWGVLFGFGPGLTIETVVLHSI  974 (979)
T ss_dssp             ---S-----------------BTTTTCSEEEEEEECGGGEEEEEEEECC
T ss_pred             ---c-----------------cCCCCcceeEEEEeCCchHHHHHHHHhc
Confidence               0                 0111234578999999888888888853

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.86  E-value=1e-21  Score=215.75  Aligned_cols=313  Identities=15%  Similarity=0.073  Sum_probs=213.9

Q ss_pred             CCCCCEEEEecccccCC-CCCHHHHHHHHHc-----CCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccC
Q psy11396        112 INNDDIAIIGISGQFPK-ANNVKKFWNNLLI-----GRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFD  185 (829)
Q Consensus       112 ~~~~~IaItG~g~~~p~-g~~~~~~w~~l~~-----G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd  185 (829)
                      |...+|.|+|+|...|. -.+.+++.+.+..     +.      + ..|-                ..            
T Consensus         8 m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~------~-~~~i----------------~~------------   52 (345)
T 3s21_A            8 MLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGI------K-TDVL----------------GD------------   52 (345)
T ss_dssp             GSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTC------C-CCHH----------------HH------------
T ss_pred             ceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCC------C-HHHH----------------HH------------
Confidence            44578999999999998 5788888876632     21      1 1110                00            


Q ss_pred             CcCCCCCHHHhh-cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchh
Q psy11396        186 PLFFNISPSEAE-YMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       186 ~~~f~i~p~~~~-~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  264 (829)
                        ..||..+... .-.....|+.+|+++||+++|+++++++    .+++++..+++.                  ....+
T Consensus        53 --~tGi~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~------------------~p~~a  108 (345)
T 3s21_A           53 --VAGIHARRLWDQDVQASDAATQAARKALIDANIGIEKIG----LLINTSVSRDYL------------------EPSTA  108 (345)
T ss_dssp             --TTCCSEEEECSSCCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEECCSCCSCS------------------SSCHH
T ss_pred             --hhCceeEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CChHH
Confidence              0011111110 0113567999999999999999999998    899987654431                  12457


Q ss_pred             hHhhhhccCC--CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC
Q psy11396        265 ARVSYFLNLQ--GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA  342 (829)
Q Consensus       265 ~~ia~~lgl~--Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~  342 (829)
                      .+++..+|++  +|++.|+.+|+|++.||..|+++|++|.++.+||+|+|.++....   +...++.++++.|++|+...
T Consensus       109 ~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~---~~~~~~~~~~~~~~~f~~~~  185 (345)
T 3s21_A          109 SIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYE---KTLERMTSPDVTEEEFRNEL  185 (345)
T ss_dssp             HHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHH---HHHHHHTCTTCCHHHHHHHH
T ss_pred             HHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhc---cccccccCCccchhhhhhhc
Confidence            8899999995  799999999999999999999999999999999999999764422   22233445556778898888


Q ss_pred             CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCC-------C--------HHHHHHHHHHHHHHcC
Q psy11396        343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP-------N--------TKSQIRLQTKIYKKFN  407 (829)
Q Consensus       343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p-------~--------~~~~~~ai~~Al~~Ag  407 (829)
                      .++++||||+++||++.+... .+.    .|.+....+++.......+       +        ...+.++++++|+++|
T Consensus       186 ~~~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g  260 (345)
T 3s21_A          186 AALTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLG  260 (345)
T ss_dssp             GGGGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cceeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999865421 122    3445444444322111111       1        1234577889999999


Q ss_pred             CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCC
Q psy11396        408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY  487 (829)
Q Consensus       408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~  487 (829)
                      ++++|||++.+|-.+...     .+++.+.++-   ..+.++  ..-..+||+.+|+-.+.|..++   +.|.+.     
T Consensus       261 l~~~did~~v~Hq~~~~i-----~~~~~~~lgl---~~ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~-----  322 (345)
T 3s21_A          261 WAVEELDQFVIHQVSRPH-----TAAFVKSFGI---DPAKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRLK-----  322 (345)
T ss_dssp             CCGGGCSEEEECCSCHHH-----HHHHHHHHTC---CGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCCC-----
T ss_pred             CCHHHCCEEEeCCCCHHH-----HHHHHHHcCc---CHHHce--eeHhhcCchHHHHHHHHHHHHH---HcCCCC-----
Confidence            999999999999766543     3445555542   122222  2224579999999877776654   333221     


Q ss_pred             CCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        488 NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       488 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                                  +..+++..+||.|-+..+++|+
T Consensus       323 ----------------------------~Gd~vll~~~G~G~t~~~~~l~  344 (345)
T 3s21_A          323 ----------------------------KGDRIALLGIGSGLNCSMAEVV  344 (345)
T ss_dssp             ----------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             ----------------------------CCCEEEEEEEChhhhheEEEEE
Confidence                                        1246889999999999988886

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.85  E-value=1.4e-21  Score=218.67  Aligned_cols=254  Identities=12%  Similarity=0.122  Sum_probs=183.6

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCc--c
Q psy11396        200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGP--C  277 (829)
Q Consensus       200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp--~  277 (829)
                      .....|+.+|+++||+++|+++++++    .+++++..+ +.                  ....+.+|+..+|++++  +
T Consensus       111 ~~~~~la~~Aa~~aL~~agl~~~~Id----~vi~~t~~~-~~------------------~p~~a~~v~~~lGl~~~~~~  167 (393)
T 1ted_A          111 EHAVPLAVDVSKRALAGLPYRAAEIG----LLVLATSTG-FI------------------APGVDVAIVKELGLSPSISR  167 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESSC-CC------------------SSCHHHHHHHHHTCCTTCEE
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-Cc------------------cChHHHHHHHHcCcCCCcce
Confidence            35678999999999999999988887    677776543 10                  12357899999999875  5


Q ss_pred             eee-ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC----CcccccceE
Q psy11396        278 LAI-DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN----GFVPGEGVG  352 (829)
Q Consensus       278 ~tv-~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~----G~~~gEGaa  352 (829)
                      +++ +++|+|++.||..|+++|++|.+|.+||+|+|.++...                  -|+.+++    ++++||||+
T Consensus       168 ~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~------------------~~~~~r~~~~~~~lfGDGA~  229 (393)
T 1ted_A          168 VVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA------------------VFADDINDVVIHSLFGDGCA  229 (393)
T ss_dssp             EEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC------------------CCCSSHHHHHHHHHBCEEEE
T ss_pred             eEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC------------------CCCCCHHHhhhhhhhcCccE
Confidence            777 99999999999999999999999999999999864210                  0334444    899999999


Q ss_pred             EEEEccchhhhhCCCceEEEEEEeeee--cCCCCC--------------CCCCC--CHHHHHHHHHHHHHHcCCCCCCcc
Q psy11396        353 VLMLKKLKDAKKDGDDIYCIIKGWGVN--QDGKTN--------------GITAP--NTKSQIRLQTKIYKKFNINPNDIQ  414 (829)
Q Consensus       353 alvL~~~~~A~~~g~~i~a~I~g~~~~--~dg~~~--------------~~~~p--~~~~~~~ai~~Al~~Agl~~~dId  414 (829)
                      |+||++.+.+..++. .+++|.+++..  .++...              +...|  ....+.++++++|+++|++++|||
T Consensus       230 A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId  308 (393)
T 1ted_A          230 ALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDID  308 (393)
T ss_dssp             EEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred             EEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCC
Confidence            999998765533343 45677776544  554321              01111  234677899999999999999999


Q ss_pred             EEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396        415 LLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH  493 (829)
Q Consensus       415 ~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~  493 (829)
                      ||.+|++++...|.+     .+.++-   ..+.+++ ......+||+.+|+-...|..++   +.+.+.           
T Consensus       309 ~~~~H~~~~~i~d~~-----~~~lgl---~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~~-----------  366 (393)
T 1ted_A          309 LWAIHPGGPKIIEQS-----VRSLGI---SAELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAESA-----------  366 (393)
T ss_dssp             CEEECCSCHHHHHHH-----HHHHTC---CGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSSS-----------
T ss_pred             EEEECCCcHHHHHHH-----HHHcCC---CHHHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCccC-----------
Confidence            999999999876644     344442   1222332 13456689999999766655443   333220           


Q ss_pred             CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                           ++..++++.+||.|.+.++++|+-
T Consensus       367 ---------------------~~Gd~vll~~~G~G~t~~~~~l~~  390 (393)
T 1ted_A          367 ---------------------KAISTGVAFAFGPGVTVEGMLFDI  390 (393)
T ss_dssp             ---------------------SSSEEEEEEEEETTTEEEEEEEEE
T ss_pred             ---------------------CCCCeEEEEEeccchhhhhhheee
Confidence                                 012568999999999999999874

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.85  E-value=6.6e-21  Score=208.40  Aligned_cols=293  Identities=16%  Similarity=0.246  Sum_probs=199.9

Q ss_pred             CEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        116 DIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       116 ~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      +|.|+|+|+.+|. -.+.+++|+.+...  ++. .+ ..|-.                ...              ||..+
T Consensus        11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~--~~~-~~-~~~i~----------------~rt--------------gi~~r   56 (333)
T 4dfe_A           11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQ--GIE-TS-DEWIV----------------ART--------------GIHAR   56 (333)
T ss_dssp             EEEEEEEEEECCSEEEEHHHHHHHHC-----CC-CC-HHHHH----------------HHH--------------CCSEE
T ss_pred             ceEEEEEEEECCCcEEcHHHHHHHhccc--cCC-CC-HHHhH----------------Hhc--------------CceEE
Confidence            7999999999999 57999999987441  110 00 11100                000              01100


Q ss_pred             Hh-hcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC
Q psy11396        195 EA-EYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL  273 (829)
Q Consensus       195 ~~-~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  273 (829)
                      .. ..-.+...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.+++..+|+
T Consensus        57 ~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id----~vi~~t~~~~~~------------------~p~~a~~v~~~lgl  114 (333)
T 4dfe_A           57 YFAEPDVTTSDLAFIASQRAIEAADIDPQSID----LIIVATSTPDFV------------------FPSTACLLQNKLGI  114 (333)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSSS------------------BSCHHHHHHHHTTC
T ss_pred             EEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CCcHHHHHHHHhCC
Confidence            00 00124678999999999999999999998    899997765442                  12457889999999


Q ss_pred             --CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccce
Q psy11396        274 --QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV  351 (829)
Q Consensus       274 --~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGa  351 (829)
                        ++|+++|+.+|+|++.||..|+++|++|.++.+||+|+|.++...                  .|+.+..++++||||
T Consensus       115 ~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~------------------~~~d~~~~~lfGDGA  176 (333)
T 4dfe_A          115 RNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL------------------DFKDRTTCVLFGDGA  176 (333)
T ss_dssp             CSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC------------------CTTCTTTTTTBCEEE
T ss_pred             CCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc------------------Ccccccceeeecccc
Confidence              679999999999999999999999999999999999999864321                  122344678999999


Q ss_pred             EEEEEccchhhhhCCCceEEEEEEeeeecCCCCCC-CC----------------CCC--------HHHHHHHHHHHHHHc
Q psy11396        352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNG-IT----------------APN--------TKSQIRLQTKIYKKF  406 (829)
Q Consensus       352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-~~----------------~p~--------~~~~~~ai~~Al~~A  406 (829)
                      +|+||++.+.     ..++    ++...+++.... ..                ..+        ...+.++++++|+++
T Consensus       177 ~A~vl~~~~~-----~~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~  247 (333)
T 4dfe_A          177 GAVILQASDE-----PGVL----ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKA  247 (333)
T ss_dssp             EEEEEEEESS-----CSEE----EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEcCC-----CCeE----EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999998652     2232    233333332100 00                011        245678899999999


Q ss_pred             CCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCC
Q psy11396        407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTIN  486 (829)
Q Consensus       407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~  486 (829)
                      |++++|||++.+|-.+...     .+++.+.++-   ..++++.  ....+||+.+|+=.+.|..+   ++.+.+.    
T Consensus       248 gl~~~did~~~~Hq~~~~i-----~~~~~~~lgl---~~~~~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~----  310 (333)
T 4dfe_A          248 NLSAEQIDWLIPHQANIRI-----MQSTCRKLGL---PQERMIV--TVGEHGNTSAASIPLALDVA---VRDGRIK----  310 (333)
T ss_dssp             TCCGGGCSEEEECCSCHHH-----HHHHHHHTTC---CGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCSC----
T ss_pred             CCCHHHCCEEEEcCCCHHH-----HHHHHHHhCC---CHHHhhh--hHHhcCchHHHHHHHHHHHH---HHcCCCC----
Confidence            9999999999999776643     3455555542   2222332  34467999999876666554   3343221    


Q ss_pred             CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                                   +..+++..+||.|-+-.++||+
T Consensus       311 -----------------------------~Gd~vll~~~G~G~t~~~~ll~  332 (333)
T 4dfe_A          311 -----------------------------RGQNVLIEGVGGGFTWGASVIR  332 (333)
T ss_dssp             -----------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             -----------------------------CCCEEEEEEEchhheeEEEEEE
Confidence                                         1245788899999999998886

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.73  E-value=2.1e-17  Score=184.32  Aligned_cols=276  Identities=12%  Similarity=0.087  Sum_probs=190.0

Q ss_pred             ccCCcCCCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccc
Q psy11396        183 IFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSI  262 (829)
Q Consensus       183 ~fd~~~f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (829)
                      .||+.++++..++...+.....|+.+|+++||+++|+++++++    .+++++..+ +                  ....
T Consensus        79 ~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~-~------------------~~p~  135 (387)
T 3a5r_A           79 IAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT----HLIVCCLAG-V------------------DMPG  135 (387)
T ss_dssp             HHSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSC-C------------------EESC
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC-C------------------CCCc
Confidence            4677777888888888889999999999999999999999998    788886542 1                  1224


Q ss_pred             hhhHhhhhccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCC
Q psy11396        263 LPARVSYFLNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFD  339 (829)
Q Consensus       263 ~a~~ia~~lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd  339 (829)
                      .+.+|+..+|++++   .+.++.+|+|++.||..|+++|++|.++.+||+|+|.++..                ...|+|
T Consensus       136 ~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~----------------~~~~~d  199 (387)
T 3a5r_A          136 ADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTC----------------FRGPSE  199 (387)
T ss_dssp             HHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTT----------------CCCCCS
T ss_pred             HHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchh----------------hcCCCc
Confidence            67899999999875   78899999999999999999999999999999999986431                012333


Q ss_pred             C----CCCCcccccceEEEEEccchhhhhCC-CceEEEEEEeeeecCCCCC--------------CC--CCC--CHHHHH
Q psy11396        340 Q----RANGFVPGEGVGVLMLKKLKDAKKDG-DDIYCIIKGWGVNQDGKTN--------------GI--TAP--NTKSQI  396 (829)
Q Consensus       340 ~----~~~G~~~gEGaaalvL~~~~~A~~~g-~~i~a~I~g~~~~~dg~~~--------------~~--~~p--~~~~~~  396 (829)
                      .    ...++++||||+|+||++.+..   + .....++.+.+....+...              .+  ..+  ....+.
T Consensus       200 ~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~  276 (387)
T 3a5r_A          200 THLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIK  276 (387)
T ss_dssp             SCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHH
T ss_pred             cchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHH
Confidence            2    2357899999999999875531   1 1111344443322111100              00  001  123456


Q ss_pred             HHHHHHHHHcCCC-CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHH
Q psy11396        397 RLQTKIYKKFNIN-PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIIL  474 (829)
Q Consensus       397 ~ai~~Al~~Agl~-~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l  474 (829)
                      ++++++|+++|++ ++|| ++.+|-.+...     .+++.+.++-   ..+.+..+ .+...+||+.+|+-.+.|..++.
T Consensus       277 ~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl---~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~  347 (387)
T 3a5r_A          277 TCLSDAFTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGL---EKEKLKVTRQVLKDYGNMSSATVFFIMDEMRK  347 (387)
T ss_dssp             HHHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTC---CGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCC---ChHHhHHHHHHHHhcCCcchhHHHHHHHHHHH
Confidence            7888999999998 8888 89999665533     3344555542   12223332 34566899999998888777654


Q ss_pred             HH-hcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        475 SL-KHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       475 ~L-~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      .= +.|.+.|                              .....++++.+||.|-+..+++|+--
T Consensus       348 ~g~~~G~~~~------------------------------G~~~d~vll~~fG~G~t~~~~ll~~~  383 (387)
T 3a5r_A          348 KSLENGQATT------------------------------GEGLEWGVLFGFGPGITVETVVLRSV  383 (387)
T ss_dssp             HHHHTTCSBT------------------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             hccccCCCCC------------------------------CCCcceEEEEEecCcceeeehhheec
Confidence            32 1111100                              00114689999999988888898854

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.73  E-value=1.7e-16  Score=176.30  Aligned_cols=250  Identities=16%  Similarity=0.216  Sum_probs=168.1

Q ss_pred             cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc
Q psy11396        198 YMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC  277 (829)
Q Consensus       198 ~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~  277 (829)
                      .......|+.+|+++||++||+++++++    .+++++..+++.                  ....+.+|+..+|++.|+
T Consensus       113 ~~~~~~~La~~Aa~~AL~~agi~~~dId----~vi~~t~t~~~~------------------~p~~a~~v~~~LGl~~~~  170 (392)
T 3led_A          113 ELSILAEMAVTAAEQAIERWGKPRERIG----AVLCACSNMQRA------------------YPAMAIEVQNALGLGGFA  170 (392)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCSCGGGEE----EEEEESSCCSCS------------------BSCHHHHHHHHTTCCSEE
T ss_pred             ccccHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCC------------------ccHHHHHHHHHhCCCCeE
Confidence            3345678999999999999999999988    888887655431                  123678899999999899


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLK  357 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~  357 (829)
                      +.|+.+|+|++.||..|+++|++|.++.+||+|+|.++...                 . +......+.+||||+|+||+
T Consensus       171 ~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~-----------------d-~~dr~t~~lFGDGA~A~vl~  232 (392)
T 3led_A          171 FDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHL-----------------N-FRDRDSHFIFGDVATAAIVE  232 (392)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------C-TTCTTTTTTBCEEEEEEEEE
T ss_pred             EEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcC-----------------C-cCcccCCcccccccEEEEEE
Confidence            99999999999999999999999999999999999864211                 1 11123568899999999998


Q ss_pred             cchhhhhCCCceEEEEEEeeeecCCCCC-----C---------------CCCCCH--------HHHHHHHHHHHHHcCCC
Q psy11396        358 KLKDAKKDGDDIYCIIKGWGVNQDGKTN-----G---------------ITAPNT--------KSQIRLQTKIYKKFNIN  409 (829)
Q Consensus       358 ~~~~A~~~g~~i~a~I~g~~~~~dg~~~-----~---------------~~~p~~--------~~~~~ai~~Al~~Agl~  409 (829)
                      +.+... .+    ..|.++...+++...     +               ....++        ..+.++++++|+++|++
T Consensus       233 ~~~~~~-~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~  307 (392)
T 3led_A          233 RADDAQ-GG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGID  307 (392)
T ss_dssp             EGGGCC-SS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ecCCCC-CC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            754310 11    234444333332110     0               000112        23456789999999999


Q ss_pred             CCCccEEEecCCCCCCCChHHHHHHHHH-hcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCC
Q psy11396        410 PNDIQLLEAHGTGTKLGDPIEFEALCES-FNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN  488 (829)
Q Consensus       410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~  488 (829)
                      ++|||++.+|-.+..     =.+++.+. ++-..+ ....+  ..-..+||+.+|+=.+.|..    + .+.+       
T Consensus       308 ~~dId~~v~Hqan~~-----i~~~~~~~llgl~~~-~~k~~--~~l~~~GNtssAsipl~L~~----~-~~~~-------  367 (392)
T 3led_A          308 PHGLKRMWLHQANIN-----MNEIIGRKVLGRDPT-RDENV--IILDDYANTSSAGSIIAFHK----H-QDDM-------  367 (392)
T ss_dssp             GGGCSEEEECSSCHH-----HHHHHHHHHHTSCCC-TTTBC--CCHHHHCBCGGGHHHHHHHH----C-CTTC-------
T ss_pred             HHHCcEEEEcCCCHH-----HHHHHHHHhcCCCCC-HHHHH--HHHhhhCccHHHHHHHHHHH----H-hCCC-------
Confidence            999999999944432     23444444 341111 12222  22345699988874443332    1 1111       


Q ss_pred             CCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        489 ILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       489 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                ++..+++..+||.|-+-++++|+.
T Consensus       368 --------------------------~~Gd~vll~gfG~G~t~~~~ll~~  391 (392)
T 3led_A          368 --------------------------AQGDLGLICSFGAGYSAGTVFVQK  391 (392)
T ss_dssp             --------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred             --------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence                                      012468899999999999999873

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=99.71  E-value=1.5e-16  Score=175.74  Aligned_cols=301  Identities=13%  Similarity=0.111  Sum_probs=191.7

Q ss_pred             cCCCCCCEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcC
Q psy11396        110 KSINNDDIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLF  188 (829)
Q Consensus       110 ~~~~~~~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~  188 (829)
                      ..+.-+.|.|+|+|...|. -.+.+++.+.+. +.      + ..|-                ....|            
T Consensus        24 ~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~------~-~~~i----------------~~~tG------------   67 (365)
T 3gwa_A           24 PAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DW------P-AEKI----------------LAKTG------------   67 (365)
T ss_dssp             -----CEEEEEEEEEECCSEEEEHHHHHHHCT-TC------C-HHHH----------------HHHHC------------
T ss_pred             ccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CC------C-HHHH----------------HHhcC------------
Confidence            3445678999999999999 578888876541 10      0 1110                00000            


Q ss_pred             CCCCHHHhh-cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHh
Q psy11396        189 FNISPSEAE-YMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARV  267 (829)
Q Consensus       189 f~i~p~~~~-~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  267 (829)
                        |..+... .-.....|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.++
T Consensus        68 --I~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~------------------~p~~a~~v  123 (365)
T 3gwa_A           68 --IRERRIAAPRETAADLAYEAARKLFAQGAVGADQVD----FVILCTQAPDYV------------------LPTSACML  123 (365)
T ss_dssp             --CCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCC----EEEEEESSCSCS------------------BSCHHHHH
T ss_pred             --ccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CCcHHHHH
Confidence              1000000 0012567999999999999999999998    888887654331                  12357789


Q ss_pred             hhhccCC--CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q psy11396        268 SYFLNLQ--GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGF  345 (829)
Q Consensus       268 a~~lgl~--Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~  345 (829)
                      +..+|+.  .|++.|+.+|+|++.||..|+++|++|.++.+||+|+|.++...           .+      .| ....+
T Consensus       124 ~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~~------~d-r~~~~  185 (365)
T 3gwa_A          124 QHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL-----------HP------LD-KSVRT  185 (365)
T ss_dssp             HHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS-----------CT------TC-HHHHT
T ss_pred             HHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC-----------Cc------cc-ccccc
Confidence            9999997  68999999999999999999999999999999999999875321           00      01 12346


Q ss_pred             ccccceEEEEEccchhhhhCCCceEEEEEEe-eeec-------CCCCCCC--------------------CCCC------
Q psy11396        346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGW-GVNQ-------DGKTNGI--------------------TAPN------  391 (829)
Q Consensus       346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~-~~~~-------dg~~~~~--------------------~~p~------  391 (829)
                      .+||||+|+||++.+..   ...+.....+. +...       .+.....                    ...+      
T Consensus       186 lfGDGAaA~vl~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~  262 (365)
T 3gwa_A          186 LFGDGASATAVIAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMA  262 (365)
T ss_dssp             TBCCEEEEEEEEEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHH
T ss_pred             cccceeEEEEEEecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHH
Confidence            79999999999875431   11132222111 1000       0100000                    0001      


Q ss_pred             --HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396        392 --TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM  469 (829)
Q Consensus       392 --~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l  469 (829)
                        .....++++++|+++|++++|||++.+|-.+..     =.+++.+.++-   ..+.++  ..-..+||+.+|+=.+.|
T Consensus       263 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~Lgl---~~ek~~--~~l~~~GNtssAsipl~L  332 (365)
T 3gwa_A          263 FSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF-----MLDALRKKMKI---PEHKFP--VLMEHCGNTVSSTLPLAL  332 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHHTC---CGGGSC--CCCTTTCBCGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHhCC---CHHHHH--HHHhcccchHHHHHHHHH
Confidence              233467889999999999999999999954433     34555555542   122233  223467999999866555


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        470 IKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       470 i~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                      ..+   ++.|.+.                                 +..+++..+||.|-+-+++||+
T Consensus       333 ~~~---~~~g~~~---------------------------------~Gd~vll~~fG~G~t~~~~ll~  364 (365)
T 3gwa_A          333 ETM---RANGTLA---------------------------------RGMRLMLLGFGVGYSWAGCLVN  364 (365)
T ss_dssp             HHH---HHTTCCC---------------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             HHH---HHcCCCC---------------------------------CCCEEEEEEEehhheeEEEEEE
Confidence            443   3443321                                 1246889999999999999886

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=99.71  E-value=1.3e-15  Score=165.36  Aligned_cols=241  Identities=14%  Similarity=0.185  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.+++..+|++ .|++.|
T Consensus        58 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~~~~~------------------~p~~a~~v~~~lGl~~~~~~~v  115 (323)
T 3il3_A           58 VATMGFEAAKNAIEAAQINPQDIE----LIIVATTSHSHA------------------YPSAACQVQGLLNIDDAISFDL  115 (323)
T ss_dssp             HHHHHHHHHHHHHHHHCCCGGGCC----EEEEECSCCSCS------------------SSCHHHHHHHHTTCSSCEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CccHHHHHHHHhCCCCccEEEE
Confidence            467999999999999999999998    889987654431                  123578899999995 589999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.++.+||+|+|.++...           .       +......+.+||||+|+||++.+
T Consensus       116 ~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~-------~~d~~~~~lfGDGA~A~vl~~~~  177 (323)
T 3il3_A          116 AAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKL-----------D-------ETDRSTVVLFGDGAGAVILEASE  177 (323)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSC-----------C-------TTCTTTTTTBCEEEEEEEEEEES
T ss_pred             CCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccccc-----------C-------ccccccccccccceEEEEEEEcC
Confidence            99999999999999999999999999999999874221           1       11123567899999999999754


Q ss_pred             hhhhCCCceEEEEEEeeeecCCCCC------CC---------CCCCH--------HHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396        361 DAKKDGDDIYCIIKGWGVNQDGKTN------GI---------TAPNT--------KSQIRLQTKIYKKFNINPNDIQLLE  417 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~~~~~dg~~~------~~---------~~p~~--------~~~~~ai~~Al~~Agl~~~dId~ve  417 (829)
                           +..++    ++...+++...      +.         ....+        ..+.++++++|+++|++++|||++-
T Consensus       178 -----~~~i~----~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v  248 (323)
T 3il3_A          178 -----QEGII----STHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLV  248 (323)
T ss_dssp             -----SCCEE----EEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEE
T ss_pred             -----CCCeE----EEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence                 22233    22222332110      00         00011        2345678899999999999999999


Q ss_pred             ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396        418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE  497 (829)
Q Consensus       418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~  497 (829)
                      .|-.+..     =.+++.+.++-   ..+.++.  .-..+||+.+|+=.+.|..+   ++.|.+.               
T Consensus       249 ~Hq~~~~-----i~~~~~~~lgl---~~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~---------------  300 (323)
T 3il3_A          249 PHQANLR-----IITATAKKLEM---DMSQVVV--TLDKYANNSAATVPVALDEA---IRDGRIQ---------------  300 (323)
T ss_dssp             ECCSCHH-----HHHHHHHHTTC---CGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTSSC---------------
T ss_pred             EcCCCHH-----HHHHHHHHcCc---CHHHhhc--cHhhcCchHHHHHHHHHHHH---HHcCCCC---------------
Confidence            9955432     23455555542   2222332  23356999999977666654   3443321               


Q ss_pred             CCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                        +..+++..+||.|-+-+++||+
T Consensus       301 ------------------~Gd~vll~~~G~G~t~~~~~l~  322 (323)
T 3il3_A          301 ------------------RGQLLLLEAFGGGWTWGSALVR  322 (323)
T ss_dssp             ------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             ------------------CCCEEEEEEEehhheeEEEEEE
Confidence                              1246888999999999999886

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.71  E-value=3.4e-17  Score=183.81  Aligned_cols=272  Identities=13%  Similarity=0.087  Sum_probs=182.8

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..+....++....|+.+|+++||+++|+++++++    .+++++..+ +                  .....+.+|+..
T Consensus       114 ~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id----~li~~t~~~-~------------------~~p~~a~~v~~~  170 (413)
T 1xes_A          114 LDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT----HLIFCSTTT-P------------------DLPGADFEVAKL  170 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESCC-C------------------EESCHHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-C------------------ccchHHHHHHHH
Confidence            34566666778889999999999999999999998    788886542 1                  122357789999


Q ss_pred             ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ||++++   .+.|+.+|+|++.||..|+++|++|.++.+||+|+|.++..          ...+.  .++|+....++++
T Consensus       171 lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~----------~~~~~--d~~~~~~~~~~lf  238 (413)
T 1xes_A          171 LGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVT----------FRGPS--ETHLDSLVGQALF  238 (413)
T ss_dssp             HTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTT----------CCCCC--TTCHHHHHHHHHB
T ss_pred             cCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhh----------hcCCC--ccchhhcccceeE
Confidence            999874   78899999999999999999999999999999999986431          11111  1344445678999


Q ss_pred             ccceEEEEEccchhhhhCC-CceEEEEEEeeeecCCCCC--------------CC--CCC--CHHHHHHHHHHHHHHcCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDG-DDIYCIIKGWGVNQDGKTN--------------GI--TAP--NTKSQIRLQTKIYKKFNI  408 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g-~~i~a~I~g~~~~~dg~~~--------------~~--~~p--~~~~~~~ai~~Al~~Agl  408 (829)
                      ||||+|+||++.+..   + .....++.+.+....+...              .+  ..|  ....+.++++++|+++|+
T Consensus       239 GDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl  315 (413)
T 1xes_A          239 GDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKI  315 (413)
T ss_dssp             CCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTC
T ss_pred             ecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999876531   2 1111234443322111000              00  001  124456788999999999


Q ss_pred             C-CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHH-hcCCCCCCC
Q psy11396        409 N-PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSL-KHKVLPPTI  485 (829)
Q Consensus       409 ~-~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L-~~~~ipp~~  485 (829)
                      + .+|| ++.+|-.+...     .+++.+.++-   ..+.+..+ .+...+||+.+|+-.+.|..++..= +.|.+.|  
T Consensus       316 ~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl---~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~--  384 (413)
T 1xes_A          316 SDWNKL-FWVVHPGGRAI-----LDRVEAKLNL---DPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTT--  384 (413)
T ss_dssp             CCGGGS-EEEECCSCHHH-----HHHHHHHTTC---CTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT--
T ss_pred             CCccce-eEEECCCCHHH-----HHHHHHHcCC---ChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCC--
Confidence            8 8888 78999665432     3345555542   22233332 2345689999999888877765432 1111100  


Q ss_pred             CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                                                  .....++++.+||.|-+-.+++|+--
T Consensus       385 ----------------------------G~~~d~vll~~fG~G~t~~~~ll~~~  410 (413)
T 1xes_A          385 ----------------------------GEGLEMGVLFGFGPGLTIETVVLKSV  410 (413)
T ss_dssp             ----------------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             ----------------------------CCCcceEEEEEecCCcEEeEEEEEec
Confidence                                        00124688999999999999999864

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=99.68  E-value=7.5e-17  Score=180.05  Aligned_cols=246  Identities=13%  Similarity=0.068  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t  279 (829)
                      ...|++.|+++||++  +++++++    .+++|+..+++.                  ....+..|+..+|++  .|++.
T Consensus        51 ~~~la~~Aa~~aL~~--~~~~~Id----~li~~t~~~~~~------------------~p~~a~~v~~~lGl~~~~~~~~  106 (396)
T 1xpm_A           51 IVSMGANAAKDIITD--EDKKKIG----MVIVATESAVDA------------------AKAAAVQIHNLLGIQPFARCFE  106 (396)
T ss_dssp             HHHHHHHHHHTTCCH--HHHHHEE----EEEEECSSCSBS------------------SSCHHHHHHHHTTCCSSCEEEE
T ss_pred             HHHHHHHHHHHHHhc--CCHHHCC----EEEEEeCCCCCC------------------CCCHHHHHHHHhCCCCCceEEE
Confidence            457999999999988  4555554    566776544321                  124678899999997  49999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      |+.+|+|++.||..|+++|++|.++.+||+|+|... ..                   ++ ..+++++||||+|+||++.
T Consensus       107 v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~s~-~~-------------------~~-~~~~~~~GdGA~A~vl~~~  165 (396)
T 1xpm_A          107 MKEACYAATPAIQLAKDYLATRPNEKVLVIATDTAR-YG-------------------LN-SGGEPTQGAGAVAMVIAHN  165 (396)
T ss_dssp             EESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEEC-CC-------------------TT-CSSGGGCEEEEEEEEEEES
T ss_pred             eccccHHHHHHHHHHHHHHHcCCCCEEEEEeehhhc-cc-------------------cC-CCCCcccccceEEEEeccC
Confidence            999999999999999999999999999999999621 10                   11 1368999999999999863


Q ss_pred             hhhhhCCCceEEEEEEeeeec-CCCCCCCCCC------CHHH--------HHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396        360 KDAKKDGDDIYCIIKGWGVNQ-DGKTNGITAP------NTKS--------QIRLQTKIYKKFNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~~~~-dg~~~~~~~p------~~~~--------~~~ai~~Al~~Agl~~~dId~ve~hgtgt~  424 (829)
                             ..+++...+.+... +..+...+.+      ++..        ..++++++|+++|++++|||||.+|.++++
T Consensus       166 -------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~  238 (396)
T 1xpm_A          166 -------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTK  238 (396)
T ss_dssp             -------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHH
T ss_pred             -------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchH
Confidence                   23555555444333 3221111111      3443        678999999999999999999999999998


Q ss_pred             CCChHHHHHHHHHhcccCCCCCcc-----ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396        425 LGDPIEFEALCESFNKFSYHKNFC-----ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS  499 (829)
Q Consensus       425 ~gD~~E~~Al~~~~~~~~~~~~~~-----~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~  499 (829)
                      ..|.+....+....+-   ..+.+     |--.+...+||+.+||-...|..++.   ++.+.                 
T Consensus       239 ~~~~~~~~l~~~~~~~---~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~---~~~l~-----------------  295 (396)
T 1xpm_A          239 MGKKALESIIDNADET---TQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE---NRDLQ-----------------  295 (396)
T ss_dssp             HHHHHHHTTGGGSCHH---HHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH---HSCCC-----------------
T ss_pred             HHHHHHHHHHhhcccC---CHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH---cCCCC-----------------
Confidence            7666543221100000   00000     01122356899999998887776653   23221                 


Q ss_pred             CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                      +..++++.+||.|-+...++++-
T Consensus       296 ----------------~Gd~ill~s~GsG~~~~~~~~~v  318 (396)
T 1xpm_A          296 ----------------AGETIGLFSYGSGSVGEFYSATL  318 (396)
T ss_dssp             ----------------TTCEEEEEEEETTTEEEEEEEEE
T ss_pred             ----------------CCCEEEEEEECcchhheEEEEEE
Confidence                            12468899999776555555554

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=99.67  E-value=5.8e-16  Score=170.37  Aligned_cols=246  Identities=13%  Similarity=0.090  Sum_probs=167.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++.....      +.           ....+.+++..+|++. |++.|
T Consensus        54 ~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~~~~~------~d-----------~~~~a~~v~~~lG~~~~~~~~v  112 (357)
T 3s3l_A           54 PPRMAARAARAALGRGDVDPADVS----LVLHSSLWFQG------ID-----------LWPAASYVAHEAVGRHVPAFGL  112 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSSCCS------SS-----------SSCHHHHHHHHHTCSSSCEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC------cc-----------cccHHHHHHHHhCCCCCcEEEE
Confidence            567999999999999999999988    78888653100      00           0124678889999964 88999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCC--EEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSK--IALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK  358 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d--~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~  358 (829)
                      +.+|+|++.||..|.++|++|.++  .+||+|+|.++.+.          +      ..|+. +..+++||||+|+||++
T Consensus       113 ~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------~------~~~~~-~~~~lfGDGA~A~vl~~  175 (357)
T 3s3l_A          113 AQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------I------DRWNS-VDVTMYGDGAAALVLST  175 (357)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------C------CTTTS-SSSCCBCCEEEEEEEES
T ss_pred             cCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------c------ccccc-cCCcccccccEEEEEec
Confidence            999999999999999999999999  99999999875321          0      11222 35788999999999987


Q ss_pred             chhhhhCCCceEEEEEEeeeecCCCCCC-------CCC--------CC---------------------HHHHHHHHHHH
Q psy11396        359 LKDAKKDGDDIYCIIKGWGVNQDGKTNG-------ITA--------PN---------------------TKSQIRLQTKI  402 (829)
Q Consensus       359 ~~~A~~~g~~i~a~I~g~~~~~dg~~~~-------~~~--------p~---------------------~~~~~~ai~~A  402 (829)
                      .+.    +    ..|.++...+++....       ...        ..                     .....++++++
T Consensus       176 ~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~  247 (357)
T 3s3l_A          176 RDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQA  247 (357)
T ss_dssp             SCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred             CCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHH
Confidence            431    1    1244444444432100       000        00                     11345688899


Q ss_pred             HHHcCCCCCCccEEEe-cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396        403 YKKFNINPNDIQLLEA-HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL  481 (829)
Q Consensus       403 l~~Agl~~~dId~ve~-hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i  481 (829)
                      |+++|++++|||++.+ |-.... -+.     +.+.++-   ..+.++. .+...+||+.+|+=.+.|..++   +.|.+
T Consensus       248 L~~~gl~~~did~~v~~hq~~~~-~~~-----~~~~lgl---~~ek~~~-~~~~~~GNt~aAsipl~L~~~~---~~g~l  314 (357)
T 3s3l_A          248 LEDAGTAIEDIAHAVIPVSRRGT-GHE-----LHDLLGL---PDERTSW-AYGRTTGHVGAGDQYAGLAHLV---ENALV  314 (357)
T ss_dssp             HHHTTCCGGGCSEEECCSCCCCS-SCC-----HHHHHTS---CGGGBTH-HHHHHHCBCTTCHHHHHHHHHH---HTTCC
T ss_pred             HHHcCCCHHHCCEEEecCcChHH-HHH-----HHHHcCC---CHHHhHH-HhccccccchHhHHHHHHHHHH---HcCCC
Confidence            9999999999999996 865554 333     3444442   1222222 2223469999998666665543   33322


Q ss_pred             CCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       482 pp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      .                                 +..+++..+||.|-+-++++|+--
T Consensus       315 ~---------------------------------~Gd~vll~~fG~G~t~~a~ll~~~  339 (357)
T 3s3l_A          315 Q---------------------------------PGDRVLLFGGGAGYTCTAAVVEIL  339 (357)
T ss_dssp             C---------------------------------TTCEEEEECCBTTTEEEEEEEEEC
T ss_pred             C---------------------------------CCCEEEEEEEchhhhheeeeEEec
Confidence            1                                 124689999999999899998864

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=99.66  E-value=4.7e-15  Score=160.93  Aligned_cols=246  Identities=13%  Similarity=0.156  Sum_probs=161.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.+++..+|++ .|++.|
T Consensus        52 ~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~~~~~------------------~p~~a~~v~~~lGl~~~~~~~v  109 (321)
T 3il6_A           52 TSDLCHQVAKQLLEKSGKQASEID----FILVATVTPDFN------------------MPSVACQVQGAIGATEAFAFDI  109 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS------------------SSCHHHHHHHHTTCTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcC------------------CCcHHHHHHHHcCCCCceEEEe
Confidence            567999999999999999999998    889987654431                  123578899999997 589999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|+|++.||..|+++|++|.++.+||+|+|.++...           .       +..+...+.+||||+|+||++.+
T Consensus       110 ~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~-------~~dr~~~~lfGDGA~A~vl~~~~  171 (321)
T 3il6_A          110 SAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKML-----------D-------WTDRSTAVLFGDGAAGVLIEAAE  171 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGS-----------C-------TTCTTTGGGBCCEEEEEEEEEES
T ss_pred             CcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccC-----------C-------ccccccceeeccccEEEEEEEcC
Confidence            99999999999999999999999999999999874211           0       11223457899999999999754


Q ss_pred             hhhhCCCceEEEEEEe-ee-----ecC--CCCCCC----------CCCCHHHH----HHHHHHHHHHcCCCCCCccEEEe
Q psy11396        361 DAKKDGDDIYCIIKGW-GV-----NQD--GKTNGI----------TAPNTKSQ----IRLQTKIYKKFNINPNDIQLLEA  418 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~-~~-----~~d--g~~~~~----------~~p~~~~~----~~ai~~Al~~Agl~~~dId~ve~  418 (829)
                      .    + .++....+. +.     ...  +.....          ...++..+    .+.+.++++++ +.++|||++-+
T Consensus       172 ~----~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~  245 (321)
T 3il6_A          172 T----P-HFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLL  245 (321)
T ss_dssp             S----C-CEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEE
T ss_pred             C----C-CEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEE
Confidence            2    1 233222211 10     000  000000          11112221    23333444433 33899999999


Q ss_pred             cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCC
Q psy11396        419 HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN  498 (829)
Q Consensus       419 hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~  498 (829)
                      |-.+..     =.+++.+.++-   ..+.++.  .-..+||+.+|+=.+.|..+   ++.|.+.|               
T Consensus       246 Hq~~~~-----i~~~~~~~lgl---~~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~~---------------  297 (321)
T 3il6_A          246 HQANVR-----IIDKIARKTKI---SREKFLT--NMDKYGNTSAASIPILLDEA---VENGTLIL---------------  297 (321)
T ss_dssp             CCSCHH-----HHHHHHHHHTC---CGGGBCC--CGGGTCBCGGGHHHHHHHHH---HHTTSSCT---------------
T ss_pred             cCCCHH-----HHHHHHHHcCc---CHHHhhh--hHhhcccHHHHHHHHHHHHH---HHhCCCCC---------------
Confidence            954433     34556666652   1222332  34567999999866666554   34443321               


Q ss_pred             CCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                      +...+++..+||.|-+-+++||+
T Consensus       298 ----------------G~~d~vll~~fG~G~t~~~~~l~  320 (321)
T 3il6_A          298 ----------------GSQQRVVLTGFGGGLTWGSLLLT  320 (321)
T ss_dssp             ----------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred             ----------------CCCCEEEEEEEehhheeEEEEEE
Confidence                            11146889999999999998886

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=99.65  E-value=3.4e-15  Score=164.26  Aligned_cols=243  Identities=16%  Similarity=0.231  Sum_probs=166.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.+++..+|++. |++.|
T Consensus        74 ~~~La~~Aa~~aL~~agl~~~dId----~vi~~t~~~~~~------------------~p~~a~~v~~~lGl~~~~~~~v  131 (359)
T 3h78_A           74 VSALMVPAARQAIEAAGLLPEDID----LLLVNTLSPDHH------------------DPSQACLIQPLLGLRHIPVLDI  131 (359)
T ss_dssp             THHHHHHHHHHHHHHTTCCGGGCC----EEEEECSSCSSS------------------BSCHHHHHHHHHTCCSCCEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEeCCCCCC------------------CCcHHHHHHHHcCCCCCcEEEE
Confidence            457999999999999999999998    889987654331                  1235788999999964 89999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCC-CCCCcccccceEEEEEccc
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQ-RANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~-~~~G~~~gEGaaalvL~~~  359 (829)
                      +.+|+|++.||..|+++|++|.++.+||+|+|.++...           .+.      |. ....+.+||||+|+||++.
T Consensus       132 ~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~-----------~~~------d~~~~t~~lfGDGAaA~vl~~~  194 (359)
T 3h78_A          132 RAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM-----------DCS------DRGRNLSILLGDGAGAVVVSAG  194 (359)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC-----------CCS------TTTHHHHTTBCEEEEEEEEECC
T ss_pred             CCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC-----------Ccc------cccccccceecceeEEEEEEec
Confidence            99999999999999999999999999999999864321           000      10 1234678999999999975


Q ss_pred             hhhhhCCCceEEEEEEeeeecCCCC------------CCC-------------CCCCH--------HHHHHHHHHHHHHc
Q psy11396        360 KDAKKDGDDIYCIIKGWGVNQDGKT------------NGI-------------TAPNT--------KSQIRLQTKIYKKF  406 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~~~~dg~~------------~~~-------------~~p~~--------~~~~~ai~~Al~~A  406 (829)
                      +.   .+..++..    ...+++..            ...             ...++        ..+.++++++|+++
T Consensus       195 ~~---~~~~i~~~----~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~  267 (359)
T 3h78_A          195 ES---LEDGLLDL----RLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAH  267 (359)
T ss_dssp             SC---SSSEEEEE----EEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CC---CCCceEEE----EEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHc
Confidence            42   12233332    22222110            000             00011        23457889999999


Q ss_pred             CCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCC
Q psy11396        407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTIN  486 (829)
Q Consensus       407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~  486 (829)
                      |++++|||++.+|-.+...     .+++.+.++-   ..+.++.  .-..+||+.+|+=.+.|..++.   .  +.    
T Consensus       268 gl~~~did~~v~Hq~n~~i-----~~~~~~~lgl---~~ek~~~--~l~~~GNt~sAsi~l~L~~~~~---~--l~----  328 (359)
T 3h78_A          268 ELTLDDIDHVICHQPNLRI-----LDAVQEQLGI---PQHKFAV--TVDRLGNMASASTPVTLAMFWP---D--IQ----  328 (359)
T ss_dssp             TCCGGGCSEEEECCSCHHH-----HHHHHHHHTC---CGGGBCC--CHHHHCBCGGGHHHHHHHHHGG---G--SC----
T ss_pred             CCCHHHCCEEEECCCCHHH-----HHHHHHHhCc---CHHHhhh--hhhcccchHHHHHHHHHHHHHH---h--CC----
Confidence            9999999999999554432     4555555542   1222332  2335699999996666655432   1  10    


Q ss_pred             CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                                                   +..+++..+||.|-+-++++|+-
T Consensus       329 -----------------------------~Gd~vll~~fG~G~t~~~~ll~~  351 (359)
T 3h78_A          329 -----------------------------PGQRVLVLTYGSGATWGAALYRK  351 (359)
T ss_dssp             -----------------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred             -----------------------------CCCEEEEEEEchhhhheeeeEEe
Confidence                                         12357888999999999999985

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.64  E-value=2.8e-15  Score=166.94  Aligned_cols=274  Identities=13%  Similarity=0.059  Sum_probs=177.9

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..+....++....|+.+|+++||+++|+++++++    .+++++..+ +                  .....+.+|+..
T Consensus        91 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~t~-~------------------~~p~~a~~v~~~  147 (393)
T 3ov2_A           91 FDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT----HLVFCSISG-I------------------DMPGADYRLATL  147 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-C------------------CBSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEeCC-C------------------CCCCHHHHHHHH
Confidence            44555556667889999999999999999999998    888887643 2                  122467889999


Q ss_pred             ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      ||+++.   .+.++.+|+|++.||..|+++|++|.++.+||+|+|.++.          ....+..  +.++.....+++
T Consensus       148 LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~~~d--~~~~~~~~~~lF  215 (393)
T 3ov2_A          148 LGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVL----------SFRGPNE--GDFEALAGQAGF  215 (393)
T ss_dssp             HTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGG----------TCCCCCT--TCHHHHHHHHHB
T ss_pred             cCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch----------hccCCcc--cchhhhcccccc
Confidence            999874   6889999999999999999999999999999999998631          1111110  000001245789


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecC-C-CC------------CCCCCCCH-----HHHHHHHHHHHHHcCC
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQD-G-KT------------NGITAPNT-----KSQIRLQTKIYKKFNI  408 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~d-g-~~------------~~~~~p~~-----~~~~~ai~~Al~~Agl  408 (829)
                      ||||+|+||++.+... -....+ .+...+.... + ..            ..+ .+..     ..+.++++++|+++|+
T Consensus       216 GDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl  292 (393)
T 3ov2_A          216 GDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGRSLERALAPLGV  292 (393)
T ss_dssp             CCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHHHHHHHHGGGTC
T ss_pred             cCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999998754321 011222 2222221111 0 00            000 1111     1235689999999999


Q ss_pred             CC-CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHH-HhcCCCCCCC
Q psy11396        409 NP-NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILS-LKHKVLPPTI  485 (829)
Q Consensus       409 ~~-~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~-L~~~~ipp~~  485 (829)
                      ++ +|| ++.+|-.+     ..=.+++.+.++-   ..+.++.+ .+-..+||+.+|+=.+.|..++.. ++.|.+.|  
T Consensus       293 ~~~~di-~~v~Hq~n-----~~i~~~v~~~Lgl---~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~--  361 (393)
T 3ov2_A          293 REWNDV-FWVAHPGN-----WAIIDAIEAKLQL---SPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTT--  361 (393)
T ss_dssp             CSGGGS-EEEECCCC-----HHHHHHHHHHHTC---CTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT--
T ss_pred             CcccCc-EEEECCCC-----hHHHHHHHHHcCC---CHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCC--
Confidence            97 888 88999433     3334556666652   12222221 123346999999977777666543 22333221  


Q ss_pred             CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                                                  .....+++..+||.|-+-.+++|+..|.
T Consensus       362 ----------------------------G~~~d~vll~~fG~G~t~~~~ll~~~~~  389 (393)
T 3ov2_A          362 ----------------------------GDGLQWGVLLGFGPGLSIETVVLRSMPL  389 (393)
T ss_dssp             ----------------------------TTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred             ----------------------------CCCCCeEEEEEECccceeeeeeeEEccc
Confidence                                        1112468899999999999999997653

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=99.63  E-value=6.3e-15  Score=162.08  Aligned_cols=248  Identities=13%  Similarity=0.085  Sum_probs=168.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+.+++..+|+  +.|.+.
T Consensus        66 ~~~La~~Aa~~aL~~agi~~~~Id----~vi~~t~~~~~~------------------~p~~a~~v~~~lGl~~~~~~~~  123 (354)
T 4efi_A           66 AGDLCRKAGEKLLAGLGWQADSID----ALIFVSQTPNYR------------------LPATAFVLQAELDLPASCLALD  123 (354)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSCSCS------------------SSCHHHHHHHHTTCCTTSEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CCcHHHHHHHHcCcCCCccEEe
Confidence            457999999999999999999998    899987655431                  12457889999999  468999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      |+.+|+|++.||..|+++|++|.++.+||+|+|.++...           .       ++.....+.+||||+|+||++.
T Consensus       124 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~-------~~d~~~~~lfGDGA~A~vl~~~  185 (354)
T 4efi_A          124 INLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI-----------D-------PTDRSTSLLFGDAGTMTALETS  185 (354)
T ss_dssp             ECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC-----------C-------TTCHHHHTTBCCEEEEEEEEEC
T ss_pred             eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-----------C-------ccccccccccccceeEEEEeec
Confidence            999999999999999999999999999999999864321           0       0111235789999999999875


Q ss_pred             hhhhhCCCceEEEEEEeeeec-------CCCCC--------------CCCCCCH--------HHHHHHHHHHHHHcCCCC
Q psy11396        360 KDAKKDGDDIYCIIKGWGVNQ-------DGKTN--------------GITAPNT--------KSQIRLQTKIYKKFNINP  410 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g~~~~~-------dg~~~--------------~~~~p~~--------~~~~~ai~~Al~~Agl~~  410 (829)
                      +..   + .+...+...+...       .+...              .....++        ....++++++|+++|+++
T Consensus       186 ~~~---~-~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~  261 (354)
T 4efi_A          186 NGD---A-AAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDK  261 (354)
T ss_dssp             CSC---C-EEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred             CCC---C-ceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            421   1 1111121111100       00000              0000111        344667889999999999


Q ss_pred             CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy11396        411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL  490 (829)
Q Consensus       411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~  490 (829)
                      +|||++..|-.+..     =.+++.+.++-   ..+.++.  .-..+||+.+|+=.+.|..++.   .+.+         
T Consensus       262 ~did~~v~Hq~~~~-----i~~~~~~~Lgl---~~ek~~~--~l~~~GNt~sasi~~~L~~~~~---~g~~---------  319 (354)
T 4efi_A          262 DSYDAFLFHQANLF-----MLKHLAKKAGL---PAERVPV--NIGEYGNTSCASIPLLITTELK---DRLK---------  319 (354)
T ss_dssp             GGCSEEEECCCCHH-----HHHHHHHHTTC---CGGGSCC--CHHHHCBCGGGHHHHHHHHHSH---HHHH---------
T ss_pred             HHCCEEEeCCCCHH-----HHHHHHHHhCc---CHHHHHH--HHhhhCcHHHHHHHHHHHHHHH---hCCC---------
Confidence            99999999955443     24455555542   1222222  2355799999996666655432   2111         


Q ss_pred             CccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        491 NEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       491 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                                              ++..+++..+||.|-+-++++|+-.
T Consensus       320 ------------------------~~Gd~vll~~fG~G~t~~~~ll~~~  344 (354)
T 4efi_A          320 ------------------------EETLQLGMFGFGVGYSWASAALAVG  344 (354)
T ss_dssp             ------------------------HSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred             ------------------------CCCCEEEEEEEchhhhheeeEEEEC
Confidence                                    1124688999999999999999964

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=99.62  E-value=5e-15  Score=167.79  Aligned_cols=181  Identities=9%  Similarity=0.000  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC----CCcc
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL----QGPC  277 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~Gp~  277 (829)
                      ...|+.+|+++||+++|+++++|+    .+++|+..+++.                  ....+..|+..||+    ..++
T Consensus        52 ~~~La~~Aa~~aL~~agi~~~~Id----~li~~t~t~~~~------------------~p~~a~~v~~~lgl~g~~~~~~  109 (450)
T 2f82_A           52 VISMSFNAVTSLLEKYKIDPKQIG----RLEVGSETVIDK------------------SKSIKTFLMQLFEKCGNTDVEG  109 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECCCCSCS------------------SSCHHHHHTHHHHTTTCCCCBC
T ss_pred             HHHHHHHHHHHHHHHcCcCHHHCC----EEEEEecCCCCC------------------CCcHHHHHHHHhCCcCCCCceE
Confidence            457999999999999999988886    777787654321                  23467788888888    3588


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCC--CEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEE
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNS--KIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLM  355 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalv  355 (829)
                      +.|+.+|+|++.||..|.++|++|.+  +.+||+|+|.+.                      |+....+.+.||||+|+|
T Consensus       110 ~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------~~~~~~~~~fGDGA~A~l  167 (450)
T 2f82_A          110 VDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------YAEGPARPTGGAAAIAML  167 (450)
T ss_dssp             CEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------CSSSTTGGGCEEEEEEEE
T ss_pred             EEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------ccCCCCCcccccceEEEE
Confidence            99999999999999999999999998  999999999863                      111235778999999999


Q ss_pred             EccchhhhhCCCceEEEEEEeeeec--CCCCC----CCCCCCH--------HHHHHHHHHHHH------HcCCCCCCccE
Q psy11396        356 LKKLKDAKKDGDDIYCIIKGWGVNQ--DGKTN----GITAPNT--------KSQIRLQTKIYK------KFNINPNDIQL  415 (829)
Q Consensus       356 L~~~~~A~~~g~~i~a~I~g~~~~~--dg~~~----~~~~p~~--------~~~~~ai~~Al~------~Agl~~~dId~  415 (829)
                      |++.+.    . .+.....|.....  +....    ......+        ..+..+++.+++      ++|++++||||
T Consensus       168 l~~~~~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did~  242 (450)
T 2f82_A          168 IGPDAP----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADY  242 (450)
T ss_dssp             EESSCS----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCSE
T ss_pred             eccCCc----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcCE
Confidence            986532    1 1222223433221  00110    0111222        234567778886      88999999999


Q ss_pred             EEecCCCCCCCChHHH
Q psy11396        416 LEAHGTGTKLGDPIEF  431 (829)
Q Consensus       416 ve~hgtgt~~gD~~E~  431 (829)
                      +.+|.+++...+.+..
T Consensus       243 ~v~Hq~~~~i~~~~~~  258 (450)
T 2f82_A          243 FVFHSPYNKLVQKSFA  258 (450)
T ss_dssp             EEECCSSHHHHHHHHH
T ss_pred             EEecCChHHHHHHHHH
Confidence            9999999887665543

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.61  E-value=2e-14  Score=159.61  Aligned_cols=271  Identities=12%  Similarity=0.083  Sum_probs=169.4

Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF  270 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  270 (829)
                      +..+....++....|+.+|+++||++||+++++++    .+++++..+ +.                  ....+.+|+..
T Consensus        85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~-~~------------------~p~~a~~v~~~  141 (387)
T 3oit_A           85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSG-AH------------------VPGVDFRLVPL  141 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEESSC-CE------------------ESCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeCC-CC------------------cccHHHHHHHH
Confidence            45556666667889999999999999999999998    888886643 21                  22467889999


Q ss_pred             ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396        271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP  347 (829)
Q Consensus       271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~  347 (829)
                      +|+++.   .+.++.+|+|++.||..|.++|++|.++.+||+|+|.++..          ...++.  +.++.....+.+
T Consensus       142 LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------~~~~~d--~~~~~~~~~~lF  209 (387)
T 3oit_A          142 LGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMY----------FTGPDE--GCFRTLLVQGLF  209 (387)
T ss_dssp             HTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGT----------CCCCCS--SSCHHHHHHHHB
T ss_pred             hCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchh----------ccCccc--cchHhhhccccc
Confidence            999873   68899999999999999999999999999999999986411          111100  001111236789


Q ss_pred             ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCC----------C---CCCCC-----HHHHHHHHHHHHHHc---
Q psy11396        348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN----------G---ITAPN-----TKSQIRLQTKIYKKF---  406 (829)
Q Consensus       348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~----------~---~~~p~-----~~~~~~ai~~Al~~A---  406 (829)
                      ||||+|+||++.+.   ........+.+.+....+...          +   ...+.     ...+.++++++|+++   
T Consensus       210 GDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~  286 (387)
T 3oit_A          210 GDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGG  286 (387)
T ss_dssp             CCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC-
T ss_pred             ccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999999987541   111122344443322111000          0   00011     234566788888888   


Q ss_pred             -CCCCCCcc--EEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhcCCCC
Q psy11396        407 -NINPNDIQ--LLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKHKVLP  482 (829)
Q Consensus       407 -gl~~~dId--~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~~~ip  482 (829)
                       |++  |+|  ++-+|-.+.     .=.+++.+.++-   ..+.+..+ .+-..+||+.+|+=.+.|..+.   +. .+.
T Consensus       287 ~gl~--d~d~~~~v~Hq~n~-----~il~~v~~~Lgl---~~ek~~~s~~~l~~~GNtssAsip~~L~~~~---~~-~~~  352 (387)
T 3oit_A          287 DGGG--GWNDLFWAVHPGSS-----TIMDQVDAALGL---EPGKLAASRRVLSDYGNMSGATVIFALDELR---RQ-RKE  352 (387)
T ss_dssp             -------GGGSEEEECCCCH-----HHHHHHHHHHTC---CTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH---HC----
T ss_pred             CCCC--cccccEEEECCCCH-----HHHHHHHHHcCC---CHHHHHHHHHHHHHhCchHHhHHHHHHHHHH---Hh-hhc
Confidence             887  666  999994443     334555555642   12222221 1223469999998666665532   22 121


Q ss_pred             CCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       483 p~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                      +--                           .......++..+||-|-+-.+++|+.-|
T Consensus       353 ~G~---------------------------~g~~~d~vll~~fG~G~t~~~~ll~~~~  383 (387)
T 3oit_A          353 AAA---------------------------AGEWPELGVMMAFGPGMTVDAMLLHATS  383 (387)
T ss_dssp             ----------------------------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred             cCC---------------------------CCCCCCEEEEEEecccceeeeeeeEecc
Confidence            100                           0001246889999999999999999754

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=99.57  E-value=3.3e-16  Score=182.80  Aligned_cols=153  Identities=14%  Similarity=0.143  Sum_probs=124.4

Q ss_pred             cccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccch
Q psy11396        585 KNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGA  664 (829)
Q Consensus       585 ~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~Gg  664 (829)
                      .+..+.++|..+|+.+++|+++|+|||++.+    .|+|+.......         ..+..+..++|||||+|+|.|.||
T Consensus       319 ~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~~i~---------~~i~~l~~~~kPVia~v~g~Aasg  385 (593)
T 3bf0_A          319 QGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASEVIR---------AELAAARAAGKPVVVSMGGMAASG  385 (593)
T ss_dssp             TTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHHHHH---------HHHHHHHHTTCCEEEEEEEEEETH
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHHHHH---------HHHHHHHhCCCCEEEEECCChHHH
Confidence            3667889999999999999999999999874    477876532211         122233447999999999999999


Q ss_pred             hhhhhhccccccccccceeccccc------------cccccCCC-------------cce---------------ecccc
Q psy11396        665 GWAMGLFCDYTIFSEESVYQSPYM------------RYGFTPGA-------------GST---------------LIFPQ  704 (829)
Q Consensus       665 G~~lal~cD~~ia~~~a~f~~~e~------------~~Gl~p~~-------------g~~---------------~~l~r  704 (829)
                      |+.++++||++++++++.|+.+++            ++|+.|..             +++               ..|.+
T Consensus       386 G~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~~~l~~~~~~f~~  465 (593)
T 3bf0_A          386 GYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFIT  465 (593)
T ss_dssp             HHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999875            58887643             222               45667


Q ss_pred             ccCHHH-----HHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHH
Q psy11396        705 RFGKIL-----SREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK  750 (829)
Q Consensus       705 ~iG~~~-----a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~  750 (829)
                      .++..+     +.+++++|+.|+++||+++||||+|++.+++.+++.+++.
T Consensus       466 ~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~  516 (593)
T 3bf0_A          466 LVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK  516 (593)
T ss_dssp             HHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred             HHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence            788777     8999999999999999999999999998888877776544

>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}

Probab=99.55  E-value=1.5e-15  Score=157.18  Aligned_cols=147  Identities=14%  Similarity=0.085  Sum_probs=113.2

Q ss_pred             ccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccccccccccccc-CCCCEEEEecccccchhhhh
Q psy11396        590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLY-CKIPVIAAMQGHAIGAGWAM  668 (829)
Q Consensus       590 ~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~kp~Iaav~G~a~GgG~~l  668 (829)
                      +.+|.++++.+..|+++|+|||++.    |.|+|+........         .+..+.. ++||+||+|+|.|.|||+.|
T Consensus        31 ~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~~i~~---------~l~~~~~~~~kPVia~v~g~a~~gG~~l   97 (240)
T 3rst_A           31 HRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESAEIHK---------KLEEIKKETKKPIYVSMGSMAASGGYYI   97 (240)
T ss_dssp             HHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHHHHHH---------HHHHHHHHHCCCEEEEEEEEEETHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHHHHHH---------HHHHHHHhCCCeEEEEECCeehHhHHHH
Confidence            6788899999999999999999976    67888865433221         1222233 69999999999999999999


Q ss_pred             hhccccccccccceeccc---------------------cccccccCCCccee--------------------------c
Q psy11396        669 GLFCDYTIFSEESVYQSP---------------------YMRYGFTPGAGSTL--------------------------I  701 (829)
Q Consensus       669 al~cD~~ia~~~a~f~~~---------------------e~~~Gl~p~~g~~~--------------------------~  701 (829)
                      +++||++++++++.|+++                     +++.|..+..+..+                          .
T Consensus        98 A~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va  177 (240)
T 3rst_A           98 STAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVIS  177 (240)
T ss_dssp             HTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999                     55566555544221                          1


Q ss_pred             cccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHH
Q psy11396        702 FPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAK  750 (829)
Q Consensus       702 l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~  750 (829)
                      -.|.+......+ +++|+.|++++|+++||||++.+.+++.+.+.+++.
T Consensus       178 ~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~~~~  225 (240)
T 3rst_A          178 KGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHK  225 (240)
T ss_dssp             HHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHHHCG
T ss_pred             HhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHHHhC
Confidence            123445555555 788999999999999999999998888777666543

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=99.53  E-value=6.4e-13  Score=149.97  Aligned_cols=266  Identities=14%  Similarity=0.123  Sum_probs=167.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-c-ce
Q psy11396        201 PQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-P-CL  278 (829)
Q Consensus       201 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p-~~  278 (829)
                      ....|+.+|+++||++||+++++|+    .+++++.. ++                  .....+.+|+..||+++ + .+
T Consensus       109 ~a~~La~~Aa~~AL~~agi~~~dId----~li~~t~t-~~------------------~~P~~a~~v~~~LGl~~~~~~~  165 (465)
T 3e1h_A          109 DGVPLAVEASRKAMAEARLVPAQIT----HMVSTTCT-DS------------------ANPGYDHYVAKELGLSDRLEKV  165 (465)
T ss_dssp             HTHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS-CC------------------CSSCHHHHHHHHHTCCTTCEEE
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeC-CC------------------CCCcHHHHHHHHhCCCCCeeEE
Confidence            3458999999999999999999998    88888764 32                  12245788999999976 4 57


Q ss_pred             ee-ccchhhHHHHHHHHHHHHHc----CCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396        279 AI-DTACSSSLVAIAHACDSLIL----GNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV  353 (829)
Q Consensus       279 tv-~~acsSgl~Al~~A~~~I~~----G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa  353 (829)
                      .| +.+|++++.||..|.++|++    |.++.|||+|+|.++..... ......        ...+.....+.+||||+|
T Consensus       166 dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~--------~~~~d~~t~~LFGDGAaA  236 (465)
T 3e1h_A          166 LLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESID--------ALQETRIGIALFSDCASA  236 (465)
T ss_dssp             EECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHH--------HHTCCCCHHHHBCCEEEE
T ss_pred             EecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-cccccc--------ccccccccccccccceeE
Confidence            88 79999999999999999997    99999999999996543321 111000        001122345789999999


Q ss_pred             EEEccchhhhhCCCceEEEEEEeeeecCCCCCC-------------CCCCC-----HHHHHHHHHHHHHH-------cCC
Q psy11396        354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNG-------------ITAPN-----TKSQIRLQTKIYKK-------FNI  408 (829)
Q Consensus       354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-------------~~~p~-----~~~~~~ai~~Al~~-------Agl  408 (829)
                      +||++.+.... ....+..+.++.....+....             ...+.     ...+.++++++|++       +|+
T Consensus       237 vVl~~~~~~~~-~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl  315 (465)
T 3e1h_A          237 VILSNGIGEAP-GKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQ  315 (465)
T ss_dssp             EEEECCTTCCT-TCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSC
T ss_pred             EEEEccCCCcc-ccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCC
Confidence            99987543110 012222444443222111000             00011     23456778888887       679


Q ss_pred             CCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhc--CCCCCCC
Q psy11396        409 NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKH--KVLPPTI  485 (829)
Q Consensus       409 ~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~--~~ipp~~  485 (829)
                      +++||||+ +|-.+     ..=.+++.+.++-   ....++.+ ..-..+||+.+|+=.+.|-.+   ++.  +.+.|. 
T Consensus       316 ~~~DId~~-~Hqan-----~rIl~~v~~~Lgl---~~ek~~~s~~~l~~yGNtsSASip~aL~~~---~~~~~g~l~~G-  382 (465)
T 3e1h_A          316 KPADFDWA-MHPGG-----ATILSGAESAMGL---TPEHMRASYDRYINHGNSSSATIFSVLNRL---REKDMDALAPG-  382 (465)
T ss_dssp             SGGGSEEE-ECCSS-----HHHHHHHHHHHTC---CGGGGHHHHHHHHHHCBCGGGHHHHHHHHH---TSTTTTSCSSS-
T ss_pred             CHHHceEE-ecCCC-----hHHHHHHHHHhCc---CHHHhHHHHHHHhcceechHhHHHHHHHHH---HHhcccccCCC-
Confidence            99999998 99433     3334555666652   11112111 011235999999855544443   232  222211 


Q ss_pred             CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396        486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI  540 (829)
Q Consensus       486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~  540 (829)
                                                  .....+++..+||.|=+-.++||+...
T Consensus       383 ----------------------------g~~~d~vll~gfG~Glt~~~~llr~~~  409 (465)
T 3e1h_A          383 ----------------------------GKVKEYVVGCAFGPGINVEMCMLKRRM  409 (465)
T ss_dssp             ----------------------------SCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred             ----------------------------CCCCCEEEEEEEhHHHhhhheeeEEec
Confidence                                        011256888999998888888888743

>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A

Probab=99.50  E-value=9.4e-15  Score=148.77  Aligned_cols=142  Identities=18%  Similarity=0.202  Sum_probs=111.9

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEe---cc
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAM---QG  659 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav---~G  659 (829)
                      +++++.+...|...+..+++ +++++|||+..    |.|+++.......+            .+..++||||+.|   +|
T Consensus        17 g~I~~~~~~~l~~~l~~a~~-~~~~~Ivl~in----spGG~v~~~~~i~~------------~i~~~~~PVia~v~p~~G   79 (230)
T 3viv_A           17 GQITSYTYDQFDRYITIAEQ-DNAEAIIIELD----TPGGRADAMMNIVQ------------RIQQSKIPVIIYVYPPGA   79 (230)
T ss_dssp             SCBCHHHHHHHHHHHHHHHH-TTCSEEEEEEE----BSCEEHHHHHHHHH------------HHHTCSSCEEEEECSTTC
T ss_pred             CEECHHHHHHHHHHHHHHhc-CCCCEEEEEEe----CCCcCHHHHHHHHH------------HHHhCCCCEEEEEecCCC
Confidence            35666777888888888875 46899999864    77888765543222            2334799999999   99


Q ss_pred             cccchhhhhhhccccccccccceeccccccccccCCCccee---------------ccccccCH--HHHHHHHhcCCccC
Q psy11396        660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL---------------IFPQRFGK--ILSREILFTASEFK  722 (829)
Q Consensus       660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~---------------~l~r~iG~--~~a~e~ll~g~~~~  722 (829)
                      .|.|+|+.|+++||++++.++++|+.++...+. |..|.+.               .++++.|.  ..+++++.++..++
T Consensus        80 ~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr~~~~a~~~~~~~~~lt  158 (230)
T 3viv_A           80 SAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLT  158 (230)
T ss_dssp             EEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCEEC
T ss_pred             EEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhcCCeec
Confidence            999999999999999999999999999987533 4444432               35666775  79999999999999


Q ss_pred             HHHHHHcCCcccccCh-hhHH
Q psy11396        723 GKELKERGISMPVLPR-KQVL  742 (829)
Q Consensus       723 a~eA~~~GLv~~v~~~-~~l~  742 (829)
                      ++||+++||||+|++. +++.
T Consensus       159 A~EAle~GliD~V~~~~~~ll  179 (230)
T 3viv_A          159 PEEALKYGVIEVVARDINELL  179 (230)
T ss_dssp             HHHHHHTTSCSEECSSHHHHH
T ss_pred             HHHHHHcCCceEecCCHHHHH
Confidence            9999999999999974 4443

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=99.49  E-value=4.1e-13  Score=147.63  Aligned_cols=246  Identities=16%  Similarity=0.229  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++|+    .+++++..++|.                  ....+..|...||++. +++.|
T Consensus        62 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~~------------------~P~~a~~v~~~LGl~~~~a~di  119 (350)
T 4ewp_A           62 VPVMAVGAAREALERAGLQGSDLD----AVIVSTVTFPHA------------------TPSAAALVAHEIGATPAPAYDV  119 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCS----EEEEECSCCSCS------------------SSCHHHHHHHHTTCTTSCEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------CCchHHHHHHHhCCCCceEEEe
Confidence            356999999999999999999998    888887765542                  2345778999999975 78889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|++++.||..|..+|++|.++.+||+++|.++..           +      . +......+.+||||+|+||++.+
T Consensus       120 ~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-----------~------d-~~~~~~~~lfgDGA~A~vl~~~~  181 (350)
T 4ewp_A          120 SAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDV-----------V------D-PTDRSISFLLGDGAGAVIVAASD  181 (350)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------C------C-TTCTTTGGGBCEEEEEEEEEEES
T ss_pred             ecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceec-----------c------c-ccccccccccccchheeeeeccc
Confidence            9999999999999999999999999999999986421           1      1 12234567899999999998754


Q ss_pred             hhhhCCCceEEEEEEe-eeec-----------------------CCCC----CCC----CCCCH--------HHHHHHHH
Q psy11396        361 DAKKDGDDIYCIIKGW-GVNQ-----------------------DGKT----NGI----TAPNT--------KSQIRLQT  400 (829)
Q Consensus       361 ~A~~~g~~i~a~I~g~-~~~~-----------------------dg~~----~~~----~~p~~--------~~~~~ai~  400 (829)
                      ..   +  +.....+. +...                       +...    ...    ...++        ....++++
T Consensus       182 ~~---~--~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~  256 (350)
T 4ewp_A          182 EP---G--ISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAR  256 (350)
T ss_dssp             SC---C--BCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHH
T ss_pred             CC---C--ccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHH
Confidence            31   1  11111111 0000                       0000    000    00112        22457889


Q ss_pred             HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396        401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV  480 (829)
Q Consensus       401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~  480 (829)
                      ++|+++|++++|||++.+|-.+..     =.+++.+.++-   ..+.+ +...-..+||+.+|+=.+.|..+   +++|.
T Consensus       257 ~~L~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl---~~~~~-~~~~l~~~GNtssasi~~~L~~~---~~~g~  324 (350)
T 4ewp_A          257 EALDAAGVEPEDLAAFIPHQANMR-----IIDEFAKQLKL---PESVV-VARDIADAGNTSAASIPLAMHRL---LEENP  324 (350)
T ss_dssp             HHHHHHTCCGGGEEEEEECCSCHH-----HHHHHHHHTTC---CTTSE-ECCTHHHHCBCGGGHHHHHHHHH---HHHCG
T ss_pred             HHHHhhcCChhHhceEEecCCCHH-----HHHHHHHHcCc---ChHhE-EecccccccchHHHHHHHHHHHH---HHhCC
Confidence            999999999999999999954432     34455555542   11111 11122346999999866555444   33332


Q ss_pred             CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                      +.                                 +..+++..+||-|=+-+++||+
T Consensus       325 ~~---------------------------------~Gd~vll~~fG~G~t~~~~vlr  348 (350)
T 4ewp_A          325 EL---------------------------------SGGLALQIGFGAGLVYGAQVVR  348 (350)
T ss_dssp             GG---------------------------------TTSEEEEEEEETTTEEEEEEEE
T ss_pred             CC---------------------------------CcCEEEEEEEchhhEeEEEEEE
Confidence            21                                 1245788899987777788876

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=99.44  E-value=1.8e-12  Score=138.14  Aligned_cols=187  Identities=18%  Similarity=0.190  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID  281 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  281 (829)
                      ...|+.+|+++||++||+++++|+    .+++|+..+ +                    ...+..++..+++  |.+.|+
T Consensus        55 ~sdLa~~Aa~~AL~~AGi~~~DID----~II~gt~t~-q--------------------~~~A~~va~~Lgi--pafdV~  107 (347)
T 3lma_A           55 ERKLMEDAVQSALSKQNLKKEDID----IFLAGDLLN-Q--------------------NVTANYVARHLKI--PFLCLF  107 (347)
T ss_dssp             HHHHHHHHHHHHHHTTTCCGGGCS----EEEEEESSS-S--------------------STTHHHHHHHHCC--CEEEBC
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCC-c--------------------hhHHHHHHHHhCC--CEEEec
Confidence            467999999999999999999999    888886532 1                    0134456666643  899999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD  361 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~  361 (829)
                      .+|+|++.||..|+.+|++|.++.+||+|+|.++.......+     ....+..+|..    -...++||||+||++.. 
T Consensus       108 ~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~-----p~e~g~q~p~t----a~~t~dGAGA~VL~~~g-  177 (347)
T 3lma_A          108 GACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRY-----PTEYGGQKPGT----ATSTVTGSGAVVLSQQP-  177 (347)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------CCCEEEEEEEESSC-
T ss_pred             ChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccC-----cchhcccCCch----hcEEccceeEEEEEecC-
Confidence            999999999999999999999999999999987643211000     00011112221    12235899999998642 


Q ss_pred             hhhCCCceEEEEEEeee--ecCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396        362 AKKDGDDIYCIIKGWGV--NQDGKTNGITAPN------TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA  433 (829)
Q Consensus       362 A~~~g~~i~a~I~g~~~--~~dg~~~~~~~p~------~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A  433 (829)
                           ..+  .|.+...  ..|   .+...|.      .++..+.|.+.|+++|++|+|+|+|..+       |.-++..
T Consensus       178 -----~~p--~I~~~t~Gkvvd---~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg-------dL~q~g~  240 (347)
T 3lma_A          178 -----GGI--KITSATVGRVID---LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG-------DLSGVGS  240 (347)
T ss_dssp             -----CSE--EEEEEECCCCBC---CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE-------SCHHHHH
T ss_pred             -----CCC--ceeeeeeeeeec---cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC-------ChHHHHH
Confidence                 122  2333322  111   1222332      2345677899999999999999999975       5545443


Q ss_pred             --HHHHhcccC
Q psy11396        434 --LCESFNKFS  442 (829)
Q Consensus       434 --l~~~~~~~~  442 (829)
                        +.+++....
T Consensus       241 ~il~~l~~~~g  251 (347)
T 3lma_A          241 PILKDLLKEEG  251 (347)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHcC
Confidence              666665443

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=99.43  E-value=6.2e-12  Score=140.06  Aligned_cols=245  Identities=11%  Similarity=0.037  Sum_probs=162.3

Q ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cc
Q psy11396        200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PC  277 (829)
Q Consensus       200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~  277 (829)
                      .....|+.+|+++||+++|+++++|+    .+++++..+ +                  .....+.+++..+|+++  +.
T Consensus       135 ~~~~~La~~Aa~~AL~~agi~~~dId----~li~~t~t~-~------------------~~P~~a~~v~~~LGl~~~~~~  191 (413)
T 3v7i_A          135 EAVQAYGERAARGALQIAGLDVADVD----CLITSNSTT-P------------------ALPGLDVALANRLPLRGDTML  191 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECCSS-C------------------CSSCHHHHHHHHTTCCTTCEE
T ss_pred             cCHHHHHHHHHHHHHHHhCcCHHHCC----EEEEEccCC-C------------------CcCHHHHHHHHHhCCCCCceE
Confidence            35668999999999999999999998    888887653 1                  11235778999999976  45


Q ss_pred             eee-ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC-----Ccccccce
Q psy11396        278 LAI-DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN-----GFVPGEGV  351 (829)
Q Consensus       278 ~tv-~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~-----G~~~gEGa  351 (829)
                      +.| +.+|+|++.||..|+++|++|.++.|||+|+|.++...                 .+ +....     ...+||||
T Consensus       192 ~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-----------------~~-~d~~~~~lv~~~LFGDGA  253 (413)
T 3v7i_A          192 LPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-----------------QP-ADDTLESLIVRLLFADTA  253 (413)
T ss_dssp             EEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-----------------CS-SCCSTTHHHHHHHBCCEE
T ss_pred             EEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-----------------Cc-cccchhhhhcceeecccc
Confidence            777 99999999999999999999999999999999874221                 11 11122     56899999


Q ss_pred             EEEEEccchhhhhCCCceEEEEEEeeeecCCCCC----------C---CCCCC----HHHHHHHHHHHHH------HcCC
Q psy11396        352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN----------G---ITAPN----TKSQIRLQTKIYK------KFNI  408 (829)
Q Consensus       352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~----------~---~~~p~----~~~~~~ai~~Al~------~Agl  408 (829)
                      +|+||++.+..     .+..++.+......+...          +   ...+.    ......+++++|+      ++|+
T Consensus       254 aAvvl~~~~~~-----~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl  328 (413)
T 3v7i_A          254 VAAVVTGRPRP-----ESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSW  328 (413)
T ss_dssp             EEEEEESSCCT-----TEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTC
T ss_pred             EEEEEEecCCC-----CCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCC
Confidence            99999875421     112244444322111000          0   00011    2235668888999      8898


Q ss_pred             CCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCC
Q psy11396        409 NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY  487 (829)
Q Consensus       409 ~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~  487 (829)
                      +   ||++-+|-.+.     .=.+++.+.++.. ...+.+.. -.+-. +||+.+|+=.+.|-.++   +. .+.     
T Consensus       329 ~---id~~v~Hq~~~-----~il~~v~~~Lg~~-l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~---~~-~~~-----  389 (413)
T 3v7i_A          329 H---PDVLLAHPGGT-----RVLEYMEQTMPDE-WPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH---DA-GQK-----  389 (413)
T ss_dssp             C---CCEEEEECSSH-----HHHHHHHHHSCSS-CCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH---HH-CCC-----
T ss_pred             c---eeEEEECCCCh-----HHHHHHHHHhCCC-CCHHHhhccceEec-eeChHHHHHHHHHHHHH---hC-CCC-----
Confidence            7   99999994443     3345556666510 11222210 12233 79999998666665544   22 111     


Q ss_pred             CCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        488 NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       488 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                                  +..+++..+||.|=+-.+++|+
T Consensus       390 ----------------------------~Gd~vll~~fG~Glt~~~~ll~  411 (413)
T 3v7i_A          390 ----------------------------TGSRAVLYAAAPGLTATALEGE  411 (413)
T ss_dssp             ----------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             ----------------------------CCCEEEEEEECHHHhHhhhheE
Confidence                                        1135788999998888888886

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=99.42  E-value=2e-13  Score=151.27  Aligned_cols=215  Identities=16%  Similarity=0.110  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      ...|+.+|+++||+++|  +++|+    .+++++..+++.                  ....+..|+..||+++  +++.
T Consensus        56 ~~~La~~Aa~~aL~~a~--~~~Id----~li~~t~t~~~~------------------~ps~a~~v~~~LGl~~~~~~~d  111 (388)
T 3v4n_A           56 IVTFAANAAEAILTKED--KEAID----MVIVGTESSIDE------------------SKAAAVVLHRLMGIQPFARSFE  111 (388)
T ss_dssp             HHHHHHHHHHTTCCHHH--HHHEE----EEEEECSSCSBS------------------SSCHHHHHHHHTTCCSSCEEEE
T ss_pred             HHHHHHHHHHHHHHhCC--cccCC----EEEEEeccCCCc------------------CccHHHHHHHHcCCCCCceEee
Confidence            45799999999999997  66776    788887655431                  1245788999999975  8889


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      +..+|+|++.||..|.++|++|.++.+||+|+|.+....                    + ..+....||||+|+||++.
T Consensus       112 v~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~~--------------------~-~~~~~lfGDGA~A~ll~~~  170 (388)
T 3v4n_A          112 IKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGL--------------------N-SGGEPTQGAGAVAMLVSSE  170 (388)
T ss_dssp             EESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCCT--------------------T-CTTGGGCEEEEEEEEEEES
T ss_pred             hhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcccC--------------------C-CCCCCccccceeEEEeecC
Confidence            999999999999999999999999999999999864211                    1 1224788999999999874


Q ss_pred             hhhhhCCCceEEEEEE-eeeecCCCC---C-CCCCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396        360 KDAKKDGDDIYCIIKG-WGVNQDGKT---N-GITAP--N--------TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK  424 (829)
Q Consensus       360 ~~A~~~g~~i~a~I~g-~~~~~dg~~---~-~~~~p--~--------~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~  424 (829)
                      .       .+...-.+ .+...+...   . ....|  +        ...+.++++++|+++|++++|||++..|-..+.
T Consensus       171 ~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k  243 (388)
T 3v4n_A          171 P-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTK  243 (388)
T ss_dssp             C-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHH
T ss_pred             C-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcch
Confidence            2       22211111 111111110   0 00001  1        234567888999999999999999999964432


Q ss_pred             CCChHHH-------HHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHH
Q psy11396        425 LGDPIEF-------EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII  473 (829)
Q Consensus       425 ~gD~~E~-------~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~  473 (829)
                      ..-..-.       +++.+.++-.   .++  .-..-..+||+.+||=...|..++
T Consensus       244 ~~~ka~~ril~~~~~~~~~~l~~~---~e~--~~~~~~~~GN~~sASi~l~L~~~l  294 (388)
T 3v4n_A          244 MGKKALLAKISDQTEAEQERILAR---YEE--SIIYSRRVGNLYTGSLYLGLISLL  294 (388)
T ss_dssp             HHHHHHHHHSTTSCHHHHHHHHHH---HHH--HTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccHHHHHHhCCC---HHH--HhhHHHhcCchHHHHHHHHHHHHH
Confidence            1100000       1222222210   001  122345679999999776666554

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=99.33  E-value=1.5e-11  Score=139.75  Aligned_cols=177  Identities=14%  Similarity=0.088  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhc---cCCC-cc
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFL---NLQG-PC  277 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l---gl~G-p~  277 (829)
                      ...|+.+|+++||+++|+++++|+    .+++++..+.+.                  ....+..|...|   |+.+ ++
T Consensus        73 ~~~La~~Aa~~aL~~agi~~~dId----~li~~T~t~~~~------------------~ps~a~~v~~~L~~lG~~~~~~  130 (478)
T 2p8u_A           73 INSLCMTVVQNLMERNNLSYDCIG----RLEVGTETIIDK------------------SKSVKTNLMQLFEESGNTDIEG  130 (478)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECSCCSCS------------------SSCHHHHHGGGTTTTTCCCCBC
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCccc------------------CccHHHHHHHHHhhcCCCCceE
Confidence            457999999999999999998887    788887654431                  123456677444   4443 77


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCC--CCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEE
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGN--SKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLM  355 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~--~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalv  355 (829)
                      +.|..+|++++.||..|.++|++|.  ++.+||+|+|...                      |.........||||+|+|
T Consensus       131 ~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia~----------------------~~~~~~~~~fGdGA~A~L  188 (478)
T 2p8u_A          131 IDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAV----------------------YATGNARPTGGVGAVALL  188 (478)
T ss_dssp             CEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC----------------------CCSSTTGGGCEEEEEEEE
T ss_pred             EEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeeec----------------------ccCCCCCCcccceeEEEE
Confidence            8899999999999999999999999  9999999999520                      111223468999999999


Q ss_pred             EccchhhhhCCCceEEE-EEEeeeecCCCCC-----CCCCC--CHH--------H---HHHHHHHHHH--------HcCC
Q psy11396        356 LKKLKDAKKDGDDIYCI-IKGWGVNQDGKTN-----GITAP--NTK--------S---QIRLQTKIYK--------KFNI  408 (829)
Q Consensus       356 L~~~~~A~~~g~~i~a~-I~g~~~~~dg~~~-----~~~~p--~~~--------~---~~~ai~~Al~--------~Agl  408 (829)
                      |.+.+.    +  ++.. +.|..+ .+....     +...|  ++.        .   ..+.+++.++        ++|+
T Consensus       189 l~~~~~----~--~l~~~~~gs~~-~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~  261 (478)
T 2p8u_A          189 IGPNAP----L--IFERGLRGTHM-QHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF  261 (478)
T ss_dssp             EESSCS----E--EECTTCCEEEE-CCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             EecCCC----c--eEeeccceecc-cchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCC
Confidence            986421    0  0000 012111 111110     00001  111        1   1134556666        6799


Q ss_pred             CCCCccEEEecCCCCCCCChH
Q psy11396        409 NPNDIQLLEAHGTGTKLGDPI  429 (829)
Q Consensus       409 ~~~dId~ve~hgtgt~~gD~~  429 (829)
                      +++|||++..|-.+....+.+
T Consensus       262 ~~~did~~v~H~~~~ki~~~~  282 (478)
T 2p8u_A          262 TLNDFGFMIFHSPYCKLVQKS  282 (478)
T ss_dssp             CGGGCSEEEECCSSHHHHHHH
T ss_pred             ChHHcCEEEecCCcHHHHHHH
Confidence            999999999998776654443

>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1

Probab=99.23  E-value=2.9e-12  Score=130.11  Aligned_cols=142  Identities=14%  Similarity=0.105  Sum_probs=107.2

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .-+++..+.+++...|..++.+++++.|+|.    ..|.|+++..-....+            .+..+++|+++.|+|.|
T Consensus        51 ~g~I~~~~a~~i~~~L~~l~~~~~~k~I~l~----InSPGG~v~ag~~I~~------------~i~~~~~pV~t~v~G~A  114 (218)
T 1y7o_A           51 TGPVEDNMANSVIAQLLFLDAQDSTKDIYLY----VNTPGGSVSAGLAIVD------------TMNFIKADVQTIVMGMA  114 (218)
T ss_dssp             ESCBCHHHHHHHHHHHHHHHHHCTTSCEEEE----EEECCBCHHHHHHHHH------------HHHHSSSCEEEEEEEEE
T ss_pred             eCEECHHHHHHHHHHHHHHHhcCCCCCEEEE----EECcCCCHHHHHHHHH------------HHHhcCCCEEEEEccEe
Confidence            3456777888899999998888777888776    4566666644332221            22336899999999999


Q ss_pred             cchhhhhhhcccc--ccccccceeccccccccccCCCcce------------------eccccccCH--HHHHHHHhcCC
Q psy11396        662 IGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGST------------------LIFPQRFGK--ILSREILFTAS  719 (829)
Q Consensus       662 ~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~------------------~~l~r~iG~--~~a~e~ll~g~  719 (829)
                      .++|+.++++||.  |++.++++|++.+.. |..+..|..                  ..+++..|.  .++.+++..++
T Consensus       115 aS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~~~  193 (218)
T 1y7o_A          115 ASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDN  193 (218)
T ss_dssp             ETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred             HHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCC
Confidence            9999999999999  999999999999987 433322321                  346666665  58889999999


Q ss_pred             ccCHHHHHHcCCcccccChhh
Q psy11396        720 EFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       720 ~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      .|+++||+++||||+|++.++
T Consensus       194 ~~ta~EA~e~GLVD~v~~~~~  214 (218)
T 1y7o_A          194 WMSAQETLEYGFIDEIMANNS  214 (218)
T ss_dssp             CBCHHHHHHHTSCSEECCCC-
T ss_pred             EEcHHHHHHCCCCcEEcCcCC
Confidence            999999999999999998765

>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=99.19  E-value=3.6e-12  Score=135.32  Aligned_cols=147  Identities=14%  Similarity=0.108  Sum_probs=113.3

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccccccccccccc---CCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLY---CKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~---~~kp~Iaav  657 (829)
                      ..|+++..+.+.+..+++.+.++ .+.+|+|++.|     |+++.+....     ..........+..   .++|+|++|
T Consensus       130 ~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~-----l~~~~~i~~al~~~~~~~vP~IavV  198 (304)
T 2f9y_B          130 MGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS-----LMQMAKTSAALAKMQERGLPYISVL  198 (304)
T ss_dssp             TTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH-----HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH-----HHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            44666777788888889888887 89999999766     7787554311     0011112222222   499999999


Q ss_pred             cccccchh-hhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        658 QGHAIGAG-WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       658 ~G~a~GgG-~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      +|+|.||| +.++++||++|+.++++|++.           +...+.+.+|..      ++++..++++++++|+||.|+
T Consensus       199 ~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~~Ae~~~~~Glvd~Vv  261 (304)
T 2f9y_B          199 TDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQRSEFLIEKGAIDMIV  261 (304)
T ss_dssp             EEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTTBHHHHGGGTCCSEEC
T ss_pred             ECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccCCHHHHHhcCCccEEe
Confidence            99999999 678999999999999999887           334456666642      468889999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcC
Q psy11396        737 PRKQVLFYSLKLAKKLSLL  755 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~  755 (829)
                      +++++.+.+.+++..+...
T Consensus       262 ~~~el~~~l~~ll~~l~~~  280 (304)
T 2f9y_B          262 RRPEMRLKLASILAKLMNL  280 (304)
T ss_dssp             CHHHHHHHHHHHHHHHTTC
T ss_pred             CcHHHHHHHHHHHHHhhcC
Confidence            9999999999999999764

>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=99.04  E-value=6.7e-11  Score=127.09  Aligned_cols=105  Identities=18%  Similarity=0.178  Sum_probs=83.7

Q ss_pred             cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        646 PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       646 ~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      +..+++|+|++|+|+|.|||+.++++||++||.++++|++      +.|.+++..++.+..+...+.++    ..+++++
T Consensus       208 l~~~~vPvIavV~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~  277 (339)
T 2f9y_A          208 MSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPR  277 (339)
T ss_dssp             HHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHH
T ss_pred             HHhCCCCEEEEEeCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHH
Confidence            4458999999999999999999999999999999999996      46777777777777777888887    6799999


Q ss_pred             HHHcCCcccccChh-------------hHHHHHHHHHHHHhcCCHHHH
Q psy11396        726 LKERGISMPVLPRK-------------QVLFYSLKLAKKLSLLSKKEL  760 (829)
Q Consensus       726 A~~~GLv~~v~~~~-------------~l~~~~~~~a~~i~~~~~~a~  760 (829)
                      |+++|+||+|+|..             ++.+.+.+..+.+...++..+
T Consensus       278 a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l  325 (339)
T 2f9y_A          278 LKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDL  325 (339)
T ss_dssp             HHTTTSCSCCCCCSTTCGGGCHHHHHHHHHHHHHHHTTTTTTSCHHHH
T ss_pred             HHHcCCeeEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence            99999999999832             444444444455555555543

>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=99.04  E-value=6.3e-11  Score=126.93  Aligned_cols=106  Identities=20%  Similarity=0.250  Sum_probs=81.3

Q ss_pred             cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        646 PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       646 ~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      +..+++|+|++|+|+|.|||+.++++||++||.++++|++      +.|.+++...+.+..+...+.++    +.++|++
T Consensus       194 l~~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~  263 (327)
T 2f9i_A          194 MASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHD  263 (327)
T ss_dssp             HHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHH
T ss_pred             HHhCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHH
Confidence            4458999999999999999999999999999999999986      44555555555555555777776    7799999


Q ss_pred             HHHcCCcccccCh---------h----hHHHHHHHHHHHHhcCCHHHHH
Q psy11396        726 LKERGISMPVLPR---------K----QVLFYSLKLAKKLSLLSKKELE  761 (829)
Q Consensus       726 A~~~GLv~~v~~~---------~----~l~~~~~~~a~~i~~~~~~a~~  761 (829)
                      |+++|+||+|+|.         +    ++.+...+..+.+...++..+.
T Consensus       264 a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~  312 (327)
T 2f9i_A          264 IKQLGIIDDVISEPLGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIA  312 (327)
T ss_dssp             HHHTTSSSEEECCCTTCGGGCHHHHHHHHHHHHHHHHHTTTTCCHHHHH
T ss_pred             HHHcCCceEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence            9999999999983         2    4555555555555555655443

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=98.93  E-value=1.9e-09  Score=122.32  Aligned_cols=117  Identities=12%  Similarity=0.016  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC----cc
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG----PC  277 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G----p~  277 (829)
                      ...|+++|+++||+++|+++++|+    .++++|..+++.                  ....+..|...||+.|    ++
T Consensus        54 ~~~ma~~Aa~~al~~a~i~~~~Id----~ii~aT~t~~~~------------------~ps~a~~v~~~l~~~g~~~~~a  111 (460)
T 2wya_A           54 INSLCLTVVQRLMERIQLPWDSVG----RLEVGTETIIDK------------------SKAVKTVLMELFQDSGNTDIEG  111 (460)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGEE----EEEEECSCCSCS------------------SSCHHHHHGGGTGGGTCCCCBC
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------CCchHHHHHHHHhccCCCCeeE
Confidence            345999999999999999999987    788998765542                  2235667888887754    45


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLK  357 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~  357 (829)
                      +-+..+|++++.||..|.++|++|..+.+++..+.....                    .|.........|+||+|++++
T Consensus       112 ~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~--------------------~~~d~~~~~~~GdGA~A~l~~  171 (460)
T 2wya_A          112 IDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA--------------------VYPSGNARPTGGAGAVAMLIG  171 (460)
T ss_dssp             CEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE--------------------CCCSSTTGGGCEEEEEEEEEE
T ss_pred             echhhhhhhHHHHHHHHHHHHHhccccceEEEEEecccc--------------------ccccccccccCcchHHhhhcc
Confidence            779999999999999999999999876544333322110                    012223445679999999998


Q ss_pred             cch
Q psy11396        358 KLK  360 (829)
Q Consensus       358 ~~~  360 (829)
                      ..+
T Consensus       172 ~~~  174 (460)
T 2wya_A          172 PKA  174 (460)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            643

>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A

Probab=98.87  E-value=4.1e-10  Score=96.82  Aligned_cols=67  Identities=3%  Similarity=0.084  Sum_probs=60.6

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      ++.|+++|+.+||+++++.|++++.|. |||| |||++||||++|++.+|+.+|.+..+. ++...++.+
T Consensus         8 ~~~v~~~va~iLg~~~~~~I~~~~~l~-dLG~-DSL~aVELr~~Le~~fgi~lp~~~l~~-~Ti~~La~~   74 (91)
T 2cg5_B            8 QRDLVEAVAHILGIRDLAAVNLDSSLA-DLGL-DALMSVEVRQTLERELNLVLSVREVRQ-LTLRKLQEL   74 (91)
T ss_dssp             CTTHHHHHHHHTTCCSCTTSCTTSBTT-TTTC-CHHHHHHHHHHHHHHHCCCCCHHHHHT-CBHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCchhhCCCCCCHH-HhCC-cchHHHHHHHHHHHHHCCCCCHHHHHh-CCHHHHHHH
Confidence            367899999999999889999999998 9999 999999999999999999999999877 577666554

>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A

Probab=98.70  E-value=5.3e-09  Score=91.58  Aligned_cols=80  Identities=8%  Similarity=0.132  Sum_probs=74.2

Q ss_pred             cCCCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccc
Q psy11396         20 KSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSK   99 (829)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~   99 (829)
                      ..+++++....+.+.+.++++.+||+.+++.|+++..|. ++|+ |||.++||+++|++.+|+.+|.+..|++||+..++
T Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~-~lG~-DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la   87 (95)
T 2ju1_A           10 AGLPRAERTAELVRLVRTSTATVLGHDDPKAVRATTPFK-ELGF-DSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVA   87 (95)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHTTCCCGGGCCSSSCHH-HHTC-SSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHH
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHCCCChhhCCCCCCHH-HcCC-cHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHH
Confidence            357789999999999999999999987888999999998 9999 99999999999999999999999999999988776


Q ss_pred             cc
Q psy11396        100 NL  101 (829)
Q Consensus       100 ~~  101 (829)
                      .+
T Consensus        88 ~~   89 (95)
T 2ju1_A           88 GF   89 (95)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A

Probab=98.42  E-value=2.2e-07  Score=93.50  Aligned_cols=144  Identities=12%  Similarity=-0.038  Sum_probs=96.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .-+++..+.+.+...|..++.++.++.|+|.    .=|.|+++..-....+            .+..+++|+++.+.|.|
T Consensus        33 ~G~I~~~~a~~i~~~L~~~~~~~~~k~I~l~----InSPGG~v~a~~~I~~------------~i~~~~~pV~~~v~g~A   96 (208)
T 2cby_A           33 GSEVNDEIANRLCAQILLLAAEDASKDISLY----INSPGGSISAGMAIYD------------TMVLAPCDIATYAMGMA   96 (208)
T ss_dssp             CSCBCHHHHHHHHHHHHHHHHHCSSSCEEEE----EEECCBCHHHHHHHHH------------HHHHCSSCEEEEEEEEE
T ss_pred             cCEECHHHHHHHHHHHHHHHhCCCCCCEEEE----EECCCCCHHHHHHHHH------------HHHhcCCCEEEEECcEe
Confidence            3455777778888888888877667776664    3455566544322222            22336799999999999


Q ss_pred             cchhhhhhhcccc--ccccccceeccccccccccCCCcce------------------eccccccC--HHHHHHHHhcCC
Q psy11396        662 IGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGST------------------LIFPQRFG--KILSREILFTAS  719 (829)
Q Consensus       662 ~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~------------------~~l~r~iG--~~~a~e~ll~g~  719 (829)
                      ..+|..++++||.  |++.+++.++.....-|.   .|-.                  ..+.+..|  .....+++..+.
T Consensus        97 aS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~  173 (208)
T 2cby_A           97 ASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDR  173 (208)
T ss_dssp             ETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCc
Confidence            9999999999999  899999998887654221   1100                  11222223  445667788899


Q ss_pred             ccCHHHHHHcCCcccccC-hhhHHHH
Q psy11396        720 EFKGKELKERGISMPVLP-RKQVLFY  744 (829)
Q Consensus       720 ~~~a~eA~~~GLv~~v~~-~~~l~~~  744 (829)
                      .|+++||+++||||+|.. .+++.+.
T Consensus       174 ~~ta~eA~e~GLvD~i~~~~~~ll~~  199 (208)
T 2cby_A          174 WFTAAEALEYGFVDHIITRAHVNGEA  199 (208)
T ss_dssp             EEEHHHHHHHTSCSEECSCC------
T ss_pred             EEcHHHHHHcCCCcEecCchHHHHHH
Confidence            999999999999999996 3555543

>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A

Probab=98.27  E-value=5.4e-07  Score=77.28  Aligned_cols=69  Identities=12%  Similarity=0.049  Sum_probs=60.9

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+.+.+.++.+||.+ ++.++++..|. ++|+ |||.+++|+++|++.+|+.++.+..|++||...++.+
T Consensus        14 ~~~~~l~~~~~~~l~~~-~~~i~~~~~~~-~lG~-DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~   82 (88)
T 2afd_A           14 DIQSWLIDQFAQQLDVD-PDDIDMEESFD-NYDL-NSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKR   82 (88)
T ss_dssp             HHHHHHHHHHHHHHTSC-GGGCCTTSCGG-GTTC-CSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCcC-HHHcCCCCCHH-HcCc-cHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHH
Confidence            35566677888899986 67899999999 9999 9999999999999999999999999999998776554

>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}

Probab=98.17  E-value=6.4e-07  Score=77.13  Aligned_cols=70  Identities=7%  Similarity=0.069  Sum_probs=62.5

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccC--ceeccccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIIND--TISYDNSKKLKSKNLS  102 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~--t~~fd~pt~~a~~~~~  102 (829)
                      .+.+.+.++++.+||.+ ++.|+++..|. ++|+ |||.++||+++|++.+|+.++.  +..|++||...++.+.
T Consensus        11 ~~~~~l~~~~~~~l~~~-~~~i~~~~~~~-~lG~-DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l   82 (89)
T 2kr5_A           11 EKLDAVMRVVSEESGIA-LEELTDDSNFA-DMGI-DSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFM   82 (89)
T ss_dssp             HHHHHHHHHHHHHHCCC-GGGCCTTCBHH-HHTC-CHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCcC-HHHCCCCCCHH-HcCc-cHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHH
Confidence            45667788888999986 67899999998 9999 9999999999999999999999  9999999988876653

>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A*

Probab=98.05  E-value=2.3e-06  Score=97.15  Aligned_cols=92  Identities=10%  Similarity=0.084  Sum_probs=50.3

Q ss_pred             EEEeccCCCCceEEEEeeecccCCcccc-------------cccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCcc
Q psy11396        520 AAINSFGFSGTNAHIVLMEKIKNNENID-------------KFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKN  586 (829)
Q Consensus       520 a~v~s~G~gG~na~~vl~e~~~~~~~~~-------------~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~  586 (829)
                      +-+++||++|||+|+|+|++|.......             .......+.++|+|||+++++|++++.+|.+||+.++..
T Consensus         4 ~~~~~fg~sgtnah~~~e~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~lSA~s~~aL~~~a~~l~~~L~~~~~~   83 (491)
T 3tzy_A            4 MRFDEFGNIITDSAVAEEPEPELPGVTEEALRLKEAALEELAAQEVTAPLVPLAVSAFLTSRKKAAAAELADWMQSPEGQ   83 (491)
T ss_dssp             ---------------------CCCCCCHHHHHHHHHHHHHHTTSCCCCCCEEEEEEESSHHHHHHHHHHHHHHHHSHHHH
T ss_pred             CcHhhcCCCCcccccccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHhcCCCC
Confidence            3478999999999999999985321110             011112335789999999999999999999999987655


Q ss_pred             cccccccccchhhhcccccceeeeee
Q psy11396        587 STVVKGITDAFSYINSSVQYKVIIIT  612 (829)
Q Consensus       587 ~~~~~eL~~~l~~~~~d~~vr~vVl~  612 (829)
                      ..-+.++.+++.. +.+-..|++|+.
T Consensus        84 ~~~l~dla~tla~-R~~~~~R~~vva  108 (491)
T 3tzy_A           84 ASSLESIGRSLSR-RNHGRSRAVVLA  108 (491)
T ss_dssp             TSCHHHHHHHHHH-SCCCSEEEEEEE
T ss_pred             CCCHHHHHHHHhc-ccCCCceEEEEE
Confidence            5558889999864 666778888776

>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*

Probab=98.05  E-value=1e-06  Score=77.35  Aligned_cols=70  Identities=13%  Similarity=0.171  Sum_probs=62.4

Q ss_pred             HHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         29 KSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      ..+.+.+.+.++.+||.+ ++.|+++..|. ++|+ |||.++||+++|++.+|+.++.+..|++||...++.+
T Consensus        20 ~~~~~~l~~~~~~~l~~~-~~~i~~~~~~~-~lG~-DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~   89 (99)
T 2liu_A           20 SEIKQVLKQQLAEALYTE-ESEIAEDQKFV-DLGL-DSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGY   89 (99)
T ss_dssp             HHHHHHHHHHHHHHTTSC-GGGCCSSSCHH-HHTC-CHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCcC-HHHcCCCCCHH-HhCc-cHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHH
Confidence            456677888889999986 67899999999 9999 9999999999999999999999999999998776554

>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}

Probab=98.01  E-value=1.5e-06  Score=75.56  Aligned_cols=71  Identities=7%  Similarity=0.041  Sum_probs=63.6

Q ss_pred             hHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         26 DIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .-...+.+.+.++.+.|||.   +.|+++..|. ++|. |||++++|.++|++.+|+.++....|++||+..++.+
T Consensus        12 ~~~~~~e~~l~~i~~~vL~~---~~i~~~~~Ff-~lGg-dSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~   82 (93)
T 4i4d_A           12 TRRRALERDIAAIWAETLGR---DSVGPHEDFA-ALGG-NSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDH   82 (93)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC---SCCCTTCCTT-TTTC-CHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCC---CCCCCCCCHH-HcCC-cHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHH
Confidence            34456777888899999998   4799999999 9999 9999999999999999999999999999999887665

>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*

Probab=97.91  E-value=1e-05  Score=68.36  Aligned_cols=69  Identities=9%  Similarity=0.105  Sum_probs=58.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-+.++++.+||.+....|+++..|. |+|+ |||.++||..+|+..+|+.+|....+..+|...++.+
T Consensus         5 i~~~l~~i~~~~l~~~~~~~i~~~~~l~-dlG~-DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~   73 (82)
T 2ava_A            5 TIDKVSDIVKEKLALGADVVVTADSEFS-KLGA-DSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADV   73 (82)
T ss_dssp             HHHHHHHHHHHHTTCSSSSCCCSSCCSC-CCTT-CCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcccccCCCCchh-hcCC-CHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHH
Confidence            4556777888889986444899999999 9999 9999999999999999999999988888887665543

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}

Probab=97.89  E-value=3.5e-06  Score=85.23  Aligned_cols=70  Identities=7%  Similarity=-0.006  Sum_probs=63.1

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      .+.+.+.++++.+||.+ ++.|+++..|. ++|+ |||+++||+++|++.+|+.++.+..|++||...++.+.
T Consensus        26 ~i~~~l~~~~a~~l~~~-~~~i~~~~~f~-~lG~-DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l   95 (212)
T 2l22_A           26 ECAQFLRQSLAAMLYCE-PGQIRDGSRFL-ELGL-DSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWV   95 (212)
T ss_dssp             HHHHHHHHHHHHHTTCC-TTSCCTTCBHH-HHTC-CHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCcC-HHHcCCCCCHH-HhCC-cHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHH
Confidence            45667788899999985 67899999999 9999 99999999999999999999999999999998877664

>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A

Probab=97.81  E-value=7.6e-06  Score=70.73  Aligned_cols=66  Identities=3%  Similarity=0.008  Sum_probs=58.2

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.++++.+||.   +.|+++..|. ++|. |||.+++|.++|++..|+.++....|.+||...++.+
T Consensus        15 ~e~~l~~i~~~vL~~---~~i~~~~~Ff-~lGg-dSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~   80 (91)
T 1dny_A           15 VESKLAEIWERVLGV---SGIGILDNFF-QIGG-HSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQY   80 (91)
T ss_dssp             HHHHHHHHHHHHHTC---SSCCSSCCTT-SSCC-SSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC---CCCCCCCCHH-HcCC-CHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHH
Confidence            445566778889997   3799999999 9999 9999999999999999999999999999998877654

>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A

Probab=97.81  E-value=7.3e-06  Score=68.47  Aligned_cols=69  Identities=10%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-+.++++.+||.+ ++.++++..|..++|+ |||.++||..+|++.+|+.+|....+.++|...++.+
T Consensus         4 i~~~l~~~~~~~l~~~-~~~i~~~~~l~~dlG~-DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~   72 (78)
T 1l0i_A            4 IEERVKKIIGEQLGVK-QEEVTNNASFVEDLGA-DSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDY   72 (78)
T ss_dssp             HHHHHHHHHHHHHTCC-GGGCCTTCBTTTTSCC-CHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-HHHCCCCcchhhhcCC-CHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHH
Confidence            4556777888888874 5789999999559999 9999999999999999999999988888887766543

>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1

Probab=97.74  E-value=2.3e-05  Score=78.96  Aligned_cols=140  Identities=12%  Similarity=-0.054  Sum_probs=87.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .-++++.+...+...|..++.++. +.|+|.    .=|.|+++..-....+            .+..+++|+++.+.|.|
T Consensus        45 ~G~I~~~~a~~i~~~L~~l~~~~~-k~I~l~----INSPGGsv~a~~~I~~------------~i~~~~~pV~t~v~g~A  107 (215)
T 2f6i_A           45 TDEINKKTADELISQLLYLDNINH-NDIKIY----INSPGGSINEGLAILD------------IFNYIKSDIQTISFGLV  107 (215)
T ss_dssp             CSCBCHHHHHHHHHHHHHHHHHCC-SCEEEE----EEECCBCHHHHHHHHH------------HHHHSSSCEEEEEEEEE
T ss_pred             ccEECHHHHHHHHHHHHHHHhCCC-CcEEEE----EECCCCCHHHHHHHHH------------HHHhcCCCEEEEEeeEh
Confidence            345566666777777777765554 655553    2245566544332222            12335779999999999


Q ss_pred             cchhhhhhhcccc--ccccccceeccccccccccC---CCccee------------ccccc--cCHHHHHHHHhcCCccC
Q psy11396        662 IGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTP---GAGSTL------------IFPQR--FGKILSREILFTASEFK  722 (829)
Q Consensus       662 ~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p---~~g~~~------------~l~r~--iG~~~a~e~ll~g~~~~  722 (829)
                      ..+|..++++||.  |++.+++.+++.....|..-   +.....            .+.+.  +......+++-....++
T Consensus       108 AS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lt  187 (215)
T 2f6i_A          108 ASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMN  187 (215)
T ss_dssp             CHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEC
T ss_pred             HhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCeecC
Confidence            9999999999999  99999999887654322110   000000            00111  12344455554455679


Q ss_pred             HHHHHHcCCcccccCh
Q psy11396        723 GKELKERGISMPVLPR  738 (829)
Q Consensus       723 a~eA~~~GLv~~v~~~  738 (829)
                      ++||+++||||+|...
T Consensus       188 a~eA~e~GLiD~I~~~  203 (215)
T 2f6i_A          188 ALEAKQYGIIDEVIET  203 (215)
T ss_dssp             HHHHHHHTSCSEECCC
T ss_pred             HHHHHHCCCCCEecCC
Confidence            9999999999999864

>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A

Probab=97.74  E-value=1e-05  Score=67.24  Aligned_cols=69  Identities=10%  Similarity=0.098  Sum_probs=58.8

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.+.++.+||.+ ++.++++..|..++|+ |||.++||..+|++.+|+.+|....++++|...++.+
T Consensus         2 i~~~l~~~~~~~l~~~-~~~i~~~~~l~~~lG~-DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~   70 (77)
T 2ehs_A            2 LEERVKEIIAEQLGVE-KEKITPEAKFVEDLGA-DSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINY   70 (77)
T ss_dssp             HHHHHHHHHHHHHCCC-GGGCCTTCBTTTTTCC-CHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-hhhCCCccchhhccCC-CHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHH
Confidence            4566778888999974 6689999999339999 9999999999999999999999988899887766543

>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*

Probab=97.72  E-value=2.8e-05  Score=65.47  Aligned_cols=69  Identities=12%  Similarity=0.066  Sum_probs=57.7

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-+.++++.+||.+ ++.|+++..|..++|+ |||.++||..+|++.+|+.+|....+..+|...++.+
T Consensus         8 i~~~l~~~i~~~l~~~-~~~i~~~~~l~~dlG~-DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~   76 (82)
T 2cnr_A            8 IVAGLAEIVNEIAGIP-VEDVKLDKSFTDDLDV-DSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKY   76 (82)
T ss_dssp             HHHHHHHHHHHHSCCC-TTTCCTTSBTTTTSCC-CHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-HHHCCCCcchhhccCC-ChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHH
Confidence            4555667778888875 5689999999559999 9999999999999999999999888888887665543

>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A

Probab=97.70  E-value=2.9e-05  Score=77.29  Aligned_cols=140  Identities=15%  Similarity=0.025  Sum_probs=93.2

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .-++++.+-+.+...|..++.++..+.|+|.    .=|.|+++..-....+            .+..+++|+++.+.|.|
T Consensus        33 ~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~----InSPGG~v~~~~~I~~------------~i~~~~~~V~t~~~G~A   96 (203)
T 3qwd_A           33 GSQIDDNVANSIVSQLLFLQAQDSEKDIYLY----INSPGGSVTAGFAIYD------------TIQHIKPDVQTICIGMA   96 (203)
T ss_dssp             CSCBCHHHHHHHHHHHHHHHHHCSSSCEEEE----EEECCBCHHHHHHHHH------------HHHHSSSCEEEEEEEEE
T ss_pred             cCEECHHHHHHHHHHHHHHHhcCCCCCEEEE----EeCCCCCHHHHHHHHH------------HHHHhcCCcEEEEeeee
Confidence            4566777788888888888876656655553    2244555544332222            12236789999999999


Q ss_pred             cchhhhhhhccc--cccccccceeccccccccccCCCccee-----------------ccccc--cCHHHHHHHHhcCCc
Q psy11396        662 IGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQR--FGKILSREILFTASE  720 (829)
Q Consensus       662 ~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~--iG~~~a~e~ll~g~~  720 (829)
                      .++|..++++||  .|++.++++|+.....-|. - +-..-                 .+.+.  .......+++-....
T Consensus        97 aSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~-~-G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~  174 (203)
T 3qwd_A           97 ASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA-Q-GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNF  174 (203)
T ss_dssp             ETHHHHHHHTSCTTCEEECTTCEEECCCCSSST-T-TTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCC
T ss_pred             hhHHHHHHHcCCcCeEEEcCCceEEEecccccc-c-CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCce
Confidence            999999999999  5999999999876543221 1 11100                 01111  124455566655667


Q ss_pred             cCHHHHHHcCCcccccChh
Q psy11396        721 FKGKELKERGISMPVLPRK  739 (829)
Q Consensus       721 ~~a~eA~~~GLv~~v~~~~  739 (829)
                      ++++||+++||||+|+...
T Consensus       175 lta~EA~e~GliD~I~~~~  193 (203)
T 3qwd_A          175 LTAEEAKEYGLIDEVMVPE  193 (203)
T ss_dssp             EEHHHHHHHTSCSEECCCC
T ss_pred             ecHHHHHHcCCcCEecCCc
Confidence            9999999999999999754

>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1

Probab=97.68  E-value=1e-05  Score=68.44  Aligned_cols=69  Identities=10%  Similarity=0.067  Sum_probs=58.8

Q ss_pred             HHhhhHHhhhhccCCCCCCCc--CCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLK--SKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      .+-+.+.++.+||.+....++  ++..|. |+|+ |||.++||..+|+..+|+.+|....++++|...++.+.
T Consensus         6 ~~~l~~~l~~~l~~~~~~~i~~~~~~~~~-dlG~-DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i   76 (83)
T 1or5_A            6 VDDLKKLLAETAGEDDSVDLAGELDTPFV-DLGY-DSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEV   76 (83)
T ss_dssp             HHHHHHHHHHHSCCCSSCCGGGCSSSCHH-HHSC-CHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcccccCCCCCCcHH-HhCC-CHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHH
Confidence            455677788889987544798  999998 9999 99999999999999999999999888999987776553

>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}

Probab=97.67  E-value=2.2e-05  Score=65.98  Aligned_cols=68  Identities=10%  Similarity=0.102  Sum_probs=57.8

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      +.+-+.++++.+||.+ ++.|+++..|..++|+ |||.++||..+|++.+|+.+|....+..+|...++.
T Consensus         7 i~~~l~~ii~~~l~~~-~~~i~~~~~l~~dlG~-DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~   74 (81)
T 2lol_A            7 IEQKVIEMVAEKLNKD-KAIITTDSRFIEDLKA-DSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIK   74 (81)
T ss_dssp             HHHHHHHHHHHHSCCC-TTTCCTTCCHHHHTTC-CHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHH
T ss_pred             HHHHHHHHHHHHHCCC-hhhCCCCCcHHHhcCC-cHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHH
Confidence            4556677788889874 6789999999449999 999999999999999999999998888888766554

>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.67  E-value=2.2e-05  Score=68.93  Aligned_cols=69  Identities=12%  Similarity=0.035  Sum_probs=58.2

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +++.+.++++.+||.+ ++.|+++..|..|+|+ |||.++||..+|++.+|+.+|....++.+|...++.+
T Consensus        16 i~~~l~~~l~~~l~~~-~~~i~~d~~l~~dlG~-DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~   84 (99)
T 2dnw_A           16 IQDRVLYVLKLYDKID-PEKLSVNSHFMKDLGL-DSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDY   84 (99)
T ss_dssp             HHHHHHHHHHHCTTSC-TTTCCTTCCCCCCCCC-CHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-HhhCCCCCchhhhcCC-CHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHH
Confidence            4555666777888874 6789999999559999 9999999999999999999999988888888766554

>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}

Probab=97.66  E-value=1.7e-05  Score=66.41  Aligned_cols=68  Identities=12%  Similarity=0.108  Sum_probs=57.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      +.+-+.++++.+||.+ ++.|+++..|..++|+ |||.++||..+|++.+|+.+|....++.+|...++.
T Consensus         6 i~~~l~~~i~~~l~~~-~~~i~~~~~l~~~lG~-DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~   73 (80)
T 1x3o_A            6 IFEKVKAVIADKLQVE-PEKVTLEARFIEDLGA-DSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVE   73 (80)
T ss_dssp             HHHHHHHHHHHHHTCC-GGGCCTTCBTTTTTCC-CHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-HHHCCCcCcHHhhcCc-cHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHH
Confidence            4556777788888874 5789999999449999 999999999999999999999998888888766544

>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A

Probab=97.63  E-value=2.2e-05  Score=77.97  Aligned_cols=136  Identities=14%  Similarity=0.049  Sum_probs=88.2

Q ss_pred             CcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccc
Q psy11396        584 LKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIG  663 (829)
Q Consensus       584 ~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~G  663 (829)
                      ++++.+.+.+...|..++.++..+.|+|.    .=|.|+++..-....+            .+..+++|+++.+.|.|..
T Consensus        34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~----InSPGG~v~a~~~I~~------------~i~~~~~pV~~~v~g~AaS   97 (193)
T 1yg6_A           34 QVEDHMANLIVAQMLFLEAENPEKDIYLY----INSPGGVITAGMSIYD------------TMQFIKPDVSTICMGQAAS   97 (193)
T ss_dssp             SBCHHHHHHHHHHHHHHHHHCSSSCEEEE----EEECCBCHHHHHHHHH------------HHHHSSSCEEEEEEEEEET
T ss_pred             EEcHHHHHHHHHHHHHHHhcCCCCCEEEE----EECcCCCHHHHHHHHH------------HHHhcCCCEEEEEeeeHHH
Confidence            44555566677777777666556666664    2345566544333222            1223578999999999999


Q ss_pred             hhhhhhhcccc--ccccccceeccccccccccCCCcce------------------eccccccC--HHHHHHHHhcCCcc
Q psy11396        664 AGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGST------------------LIFPQRFG--KILSREILFTASEF  721 (829)
Q Consensus       664 gG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~------------------~~l~r~iG--~~~a~e~ll~g~~~  721 (829)
                      +|..++++||.  |++.+++.++......|..   |-.                  ..+.+..|  .....+++-.+..+
T Consensus        98 ~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~---G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~  174 (193)
T 1yg6_A           98 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ---GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL  174 (193)
T ss_dssp             HHHHHHHTSCTTCEEECTTCEEEECCCEEEEE---EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEE
T ss_pred             HHHHHHHCCCcCcEEEecCcEEEEEecccccc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeEE
Confidence            99999999999  9999999887655432210   100                  00112222  34445554445667


Q ss_pred             CHHHHHHcCCcccccCh
Q psy11396        722 KGKELKERGISMPVLPR  738 (829)
Q Consensus       722 ~a~eA~~~GLv~~v~~~  738 (829)
                      +++||+++||||++...
T Consensus       175 ta~eA~~~GliD~i~~~  191 (193)
T 1yg6_A          175 SAPEAVEYGLVDSILTH  191 (193)
T ss_dssp             EHHHHHHHTSSSEECCC
T ss_pred             cHHHHHHcCCCCEecCC
Confidence            99999999999999854

>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1

Probab=97.60  E-value=2.2e-05  Score=68.41  Aligned_cols=66  Identities=5%  Similarity=-0.041  Sum_probs=55.3

Q ss_pred             hhhHHhhhhccCC---CCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         34 NNSKIINDTISYD---NSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        34 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      -+.+++..+||..   +++.|+++..|. ++|+ |||.++||..+|+..+|+++|....++++|+..++.+
T Consensus         8 ~l~~ii~~~l~~~~~~~~~~i~~d~~~~-dlG~-DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~   76 (95)
T 1nq4_A            8 DLLTLLRECAGEEESIDLGGDVEDVAFD-ALGY-DSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEM   76 (95)
T ss_dssp             HHHHHHHHHHTCSSTTCSCSCCSSSCHH-HHTC-CSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHH
T ss_pred             HHHHHHHHHHccccccccccCCCCCChh-hhCC-CHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHH
Confidence            3455666666664   234799999997 9999 9999999999999999999999999999998776654

>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}

Probab=97.56  E-value=4.9e-05  Score=76.66  Aligned_cols=71  Identities=10%  Similarity=0.111  Sum_probs=64.1

Q ss_pred             hHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         28 DKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      ...+.+.+.+.++.+||. +++.|+++..|. ++|+ |||.++||+++|++.+|+.++.+..|++||...++.+
T Consensus       128 ~~~i~~~l~~~~~~~l~~-~~~~i~~~~~f~-~lG~-DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~  198 (212)
T 2l22_A          128 RESIQDYLKQSLGELLFL-DPGQLRSGAQFL-DLGM-DSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADE  198 (212)
T ss_dssp             HHHHHHHHHHHHHHHHSS-CSSSCCSSCCGG-GGCS-SSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCC-ChhhCCCCCCHH-HhCC-CHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHH
Confidence            466778888999999997 466899999999 9999 9999999999999999999999999999998877655

>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*

Probab=97.54  E-value=5.2e-05  Score=64.57  Aligned_cols=67  Identities=4%  Similarity=-0.049  Sum_probs=55.9

Q ss_pred             HHhhhHHhhhhccCCCCC---CCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSK---KLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      .+-+.++++.+||.+...   .++++..|. ++|+ |||.++||..+|+..+|+.+|....++.+|...++.
T Consensus         7 ~~~l~~il~~~l~~~~~~~~~~i~~~~~l~-dlG~-DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~   76 (86)
T 1af8_A            7 TDDLRRALVECAGETDGTDLSGDFLDLRFE-DIGY-DSLALMETAARLESRYGVSIPDDVAGRVDTPRELLD   76 (86)
T ss_dssp             HHHHHHHHHTTCCCCSCCCTTTCSSTTSTT-TTTC-CTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcccccccCCCCCChh-hcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHH
Confidence            445677888999986431   688999996 9999 999999999999999999999988788887765544

>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A

Probab=97.51  E-value=2.9e-05  Score=65.23  Aligned_cols=69  Identities=13%  Similarity=0.070  Sum_probs=56.7

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-+.+.++.+||.+ ++.|+++..|..++|+ |||.++||..+|++.+|+.+|....+..+|...++.+
T Consensus         8 i~~~l~~~l~~~l~~~-~~~i~~~~~l~~dlG~-DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~   76 (81)
T 1f80_D            8 TLERVTKIIVDRLGVD-EADVKLEASFKEDLGA-DXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNY   76 (81)
T ss_dssp             HHHHHHHHHHHHSSCC-SSCCCTTCBHHHHSCC-CHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCC-HHhCCCccchHHHcCC-cHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHH
Confidence            3444566677778874 5789999999339999 9999999999999999999999888888887766543

>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1

Probab=97.48  E-value=5.5e-05  Score=68.35  Aligned_cols=70  Identities=11%  Similarity=0.086  Sum_probs=58.5

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+.+.++++.+||.+ ++.|+++..|..++|+ |||.++||..+|+..+|+.+|....++.+|...++.+
T Consensus         7 ~i~~~l~~il~~~l~~~-~~~i~~d~~l~~dlG~-DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~   76 (115)
T 1klp_A            7 EIIAGIAEIIEEVTGIE-PSEITPEKSFVDDLDI-DSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAY   76 (115)
T ss_dssp             HHHHHHHHHHHHHTCCC-TTTCCTTCCTTTTTCS-HHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcC-HHhCCCCCchhhccCC-CHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHH
Confidence            35566677778888875 5789999999559999 9999999999999999999999888888887665543

>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1

Probab=97.47  E-value=6e-05  Score=66.17  Aligned_cols=69  Identities=14%  Similarity=0.084  Sum_probs=57.9

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+-+.++++.+||.+ ++.|+++..|. ++|+ |||.++||..+|+..+|+.+|....+..+|...++.+
T Consensus        17 ~i~~~l~~ila~~l~v~-~~~I~~d~~L~-dLGl-DSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~   85 (100)
T 1vku_A           17 KLIAKFVEIASEKMGKD-LETVDEENTFK-ELGF-DSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDI   85 (100)
T ss_dssp             HHHHHHHHHHHHTTCCC-CCSCCTTSBTT-TTTC-CHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCC-HHHCCCCCCHH-HcCC-chHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHH
Confidence            35566778888888874 67899999995 9999 9999999999999999999999877777777655443

>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1

Probab=97.46  E-value=2.8e-05  Score=77.24  Aligned_cols=141  Identities=13%  Similarity=0.011  Sum_probs=90.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA  661 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a  661 (829)
                      .-++++.+-+.+...+..++.++..+.|+|.    .=|.|+++..-....+            .+..+++|+++.+.|.|
T Consensus        36 ~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~----INSpGG~v~~~~~I~~------------~i~~~~~~v~t~~~G~A   99 (201)
T 3p2l_A           36 NGEVNDHSANLVIAQLLFLESEDPDKDIYFY----INSPGGMVTAGMGVYD------------TMQFIKPDVSTICIGLA   99 (201)
T ss_dssp             ESCBCHHHHHHHHHHHHHHHHHCSSSCEEEE----EEECCBCHHHHHHHHH------------HHHHSSSCEEEEEEEEE
T ss_pred             cCEECHHHHHHHHHHHHHHHhcCCCCCEEEE----EECCCCCHHHHHHHHH------------HHHHhCCCeEEEEcCEe
Confidence            4566777778888888887766656655553    2245566544332222            12236789999999999


Q ss_pred             cchhhhhhhcccc--ccccccceeccccccccccCCCccee------------------cccccc--CHHHHHHHHhcCC
Q psy11396        662 IGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL------------------IFPQRF--GKILSREILFTAS  719 (829)
Q Consensus       662 ~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~------------------~l~r~i--G~~~a~e~ll~g~  719 (829)
                      ..+|..++++||.  |++.++++++.....-|.   .|-..                  .+.+.-  ......+++-...
T Consensus       100 aS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~  176 (201)
T 3p2l_A          100 ASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDN  176 (201)
T ss_dssp             ETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCE
T ss_pred             hhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcCe
Confidence            9999999999998  999999988776554221   11000                  011111  2334444444445


Q ss_pred             ccCHHHHHHcCCcccccCh-hhH
Q psy11396        720 EFKGKELKERGISMPVLPR-KQV  741 (829)
Q Consensus       720 ~~~a~eA~~~GLv~~v~~~-~~l  741 (829)
                      .++|+||+++||||+|++. ++|
T Consensus       177 ~lta~EA~e~GliD~I~~~~~~l  199 (201)
T 3p2l_A          177 FMMADEAKAYGLIDHVIESREAI  199 (201)
T ss_dssp             EEEHHHHHHHTSCSEECCCSCC-
T ss_pred             eecHHHHHHcCCccEecCCHHHh
Confidence            5799999999999999974 444

>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}

Probab=97.46  E-value=5.2e-05  Score=64.21  Aligned_cols=68  Identities=9%  Similarity=0.082  Sum_probs=55.4

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      +.+-+.++++.+||.+ ++.|+++..|..++|+ |||.++||..+|++.+|+.+|....+..+|...++.
T Consensus        10 i~~~l~~~i~~~l~~~-~~~i~~~~~l~~dlG~-DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~   77 (84)
T 2kwl_A           10 IFSKVRSIISEQLDKK-EDEITTDSRFVEDLNA-DSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVN   77 (84)
T ss_dssp             HHHHHHHHHHHHHCCC-GGGCCTTTHHHHTSSS-CHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-cccCCCCCchhhhcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHH
Confidence            4455666677778864 6789999999449999 999999999999999999999988777777655543

>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*

Probab=97.41  E-value=3.3e-05  Score=64.98  Aligned_cols=69  Identities=12%  Similarity=0.104  Sum_probs=57.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.++++.+||. +++.|+++..|..++|+ |||.++||..+|+..+|+.+|....++.+|...++.+
T Consensus         6 i~~~l~~ii~~~l~~-~~~~i~~d~~l~~dlg~-DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~   74 (81)
T 3gzm_A            6 TFDDIKKIISKQLSV-EEDKIQMNSNFTKDLGA-DSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDY   74 (81)
T ss_dssp             HHHHHHHHHHHHHTC-CGGGCCTTCBHHHHSCC-CHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc-CHHHCCCCCcchhhcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHH
Confidence            455666777778887 46789999999559999 9999999999999999999999888888887665543

>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}

Probab=97.41  E-value=1.8e-05  Score=66.14  Aligned_cols=69  Identities=12%  Similarity=0.101  Sum_probs=58.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-+.+.++.+||.+ ++.|+++..|..++|+ |||.++||..+|++.+|+.+|....++++|...++.+
T Consensus         5 i~~~l~~~~~~~l~~~-~~~i~~~~~l~~~lG~-DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~   73 (79)
T 2l3v_A            5 TAERVKKIVVEHLGVD-ADKVTEGASFIDDLGA-DSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKF   73 (79)
T ss_dssp             HHHHHHHHHHHHTCCC-STTCCTTCCHHHHTCC-CSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHH
T ss_pred             HHHHHHHHHHHHhCCC-HhhCCCCCccccccCC-CHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHH
Confidence            4566777888899874 5789999999339999 9999999999999999999999988888887766543

>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}

Probab=97.41  E-value=4.1e-05  Score=64.57  Aligned_cols=68  Identities=10%  Similarity=0.159  Sum_probs=55.7

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      +.+-+.++++.+||.+ ++.|+++..|..++|+ |||.++||..+|+..+|+.+|....+..+|...++.
T Consensus         8 i~~~l~~ii~~~l~~~-~~~i~~d~~l~~dlG~-DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~   75 (82)
T 2qnw_A            8 LLERVKDVVADQLGVD-RARINPESNFIKDLDA-DSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALS   75 (82)
T ss_dssp             HHHHHHHHHHHHHCCC-GGGCCTTCBHHHHSCC-CHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHH
T ss_pred             HHHHHHHHHHHHHCCC-HhhCCCccchhhccCC-cHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHH
Confidence            4455666677778864 6789999999449999 999999999999999999999988778877765543

>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1

Probab=97.38  E-value=7.3e-05  Score=77.51  Aligned_cols=137  Identities=17%  Similarity=0.065  Sum_probs=87.4

Q ss_pred             CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccccc
Q psy11396        583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAI  662 (829)
Q Consensus       583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~  662 (829)
                      -+++..+.+.+...|..++.++..+.|+|.    .=|-|+++..-....+.            +..+++|+++.+.|.|.
T Consensus        89 G~I~d~~a~~iiaqL~~l~~ed~~k~I~L~----INSPGGsV~ag~aIyd~------------I~~~k~pV~t~v~G~AA  152 (277)
T 1tg6_A           89 GPIDDSVASLVIAQLLFLQSESNKKPIHMY----INSPGGVVTAGLAIYDT------------MQYILNPICTWCVGQAA  152 (277)
T ss_dssp             SSBCHHHHHHHHHHHHHHHHHCSSSCEEEE----EEECCBCHHHHHHHHHH------------HHHSCSCEEEEEEEEEE
T ss_pred             CEECHHHHHHHHHHHHHHHhcCCCCCEEEE----EECCCCCHHHHHHHHHH------------HHhcCCCEEEEEccEeH
Confidence            345655666677777766554445666654    22445555443332221            22356899999999999


Q ss_pred             chhhhhhhcccc--ccccccceeccccccccccCCCcce-e-----------------ccccc--cCHHHHHHHHhcCCc
Q psy11396        663 GAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGST-L-----------------IFPQR--FGKILSREILFTASE  720 (829)
Q Consensus       663 GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~-~-----------------~l~r~--iG~~~a~e~ll~g~~  720 (829)
                      .+|..++++||.  |++.+++.++.-....|.   .|-. -                 .+.+.  .......+++-.+..
T Consensus       153 SaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~---~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~  229 (277)
T 1tg6_A          153 SMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA---RGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRY  229 (277)
T ss_dssp             THHHHHHHTSCTTCEEECTTCEEEECCCCCCC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEE
T ss_pred             HHHHHHHHCCCcCCEEEecCCEEEEecccccc---cCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcc
Confidence            999999999999  899999988765443221   1100 0                 01111  123445555555567


Q ss_pred             cCHHHHHHcCCcccccCh
Q psy11396        721 FKGKELKERGISMPVLPR  738 (829)
Q Consensus       721 ~~a~eA~~~GLv~~v~~~  738 (829)
                      ++++||+++||||+|...
T Consensus       230 lta~EAle~GLID~I~~~  247 (277)
T 1tg6_A          230 MSPMEAQEFGILDKVLVH  247 (277)
T ss_dssp             ECHHHHHHHTSCSEECSS
T ss_pred             cCHHHHHHCCCCCEecCc
Confidence            899999999999999964

>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*

Probab=97.37  E-value=9.6e-05  Score=64.53  Aligned_cols=68  Identities=10%  Similarity=0.156  Sum_probs=55.2

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      +.+.+.++++.+||. +++.|+++..|..|+|+ |||.++||..+|+..+|+.++....++.+|...++.
T Consensus        23 i~~~l~~iia~~l~~-~~~~i~~d~~l~~dLGl-DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~   90 (97)
T 3ejb_A           23 IEERVKKIIGEQLGV-KQEEVTNNASFVEDLGA-DSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAID   90 (97)
T ss_dssp             HHHHHHHHHHHHSCC-CTTTSCTTCBTTTTTCC-CTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHH
T ss_pred             HHHHHHHHHHHHHCc-CHHHCCCCCCchhhcCC-CHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHH
Confidence            344455666677776 46799999999669999 999999999999999999999988777777665543

>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A

Probab=97.29  E-value=7.3e-05  Score=65.84  Aligned_cols=68  Identities=13%  Similarity=0.040  Sum_probs=54.9

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce------e-----cccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI------S-----YDNSKKLKSK   99 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~------~-----fd~pt~~a~~   99 (829)
                      +.+-|.++++.+||.+ ++.|+++..|..|+|+ |||.++||..+|+..+|+.+|...      .     |++||...++
T Consensus         4 i~~~v~~ii~~~l~~~-~~~i~~d~~l~~dLGl-DSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~   81 (101)
T 2kw2_A            4 TFDRVATIIAETCDIP-RETITPESHAIDDLGI-DSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLA   81 (101)
T ss_dssp             HHHHHHHHHHHHHCCC-GGGCCTTCBCCCCCCC-CHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHH
T ss_pred             HHHHHHHHHHHHhCCC-HhhCCCCcchHHhcCC-CHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHH
Confidence            4556777888888864 6789999988669999 999999999999999999999865      2     5666666554


Q ss_pred             c
Q psy11396        100 N  100 (829)
Q Consensus       100 ~  100 (829)
                      .
T Consensus        82 ~   82 (101)
T 2kw2_A           82 A   82 (101)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}

Probab=96.35  E-value=4.3e-05  Score=67.50  Aligned_cols=68  Identities=7%  Similarity=-0.019  Sum_probs=59.3

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-+.++++.+||.+ ++.|+++..|. |+|+ |||.++||..+|+..+|+.+|....++.+|...++.+
T Consensus        27 i~~~l~~ila~~l~i~-~~~I~~d~~l~-dLGl-DSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~   94 (103)
T 2lte_A           27 MEDHLLTVLSVASGVP-KEEISRDSRME-DLAF-DSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQL   94 (103)
Confidence            6677788888899875 67899999995 9999 9999999999999999999999988888887776654

>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}

Probab=97.21  E-value=0.00014  Score=63.85  Aligned_cols=75  Identities=11%  Similarity=0.051  Sum_probs=57.2

Q ss_pred             CCCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         21 SINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      ..++.++...    +.+.++.+||. +++.|+++..|..|+|+ |||..+||..+|+..+|+.+|.....+.+|...+..
T Consensus        21 ~m~~mei~~~----l~~iiae~l~~-~~~~I~~d~~l~~dLGl-DSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~   94 (101)
T 4dxe_H           21 QSNAMENFDK----VKDIIVDRLGV-DADKVTEDASFKDDLGA-DSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVK   94 (101)
T ss_dssp             ---CTTHHHH----HHHHHHHTTCC-CGGGCCTTCBTTTTSCC-CHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHH
T ss_pred             hcCHHHHHHH----HHHHHHHHHCc-ChhhCCCCCcchhhcCC-CcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHH
Confidence            3445555544    45556667776 57789999999559999 999999999999999999999988777777665544


Q ss_pred             c
Q psy11396        101 L  101 (829)
Q Consensus       101 ~  101 (829)
                      +
T Consensus        95 ~   95 (101)
T 4dxe_H           95 F   95 (101)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}

Probab=97.08  E-value=0.00011  Score=62.85  Aligned_cols=73  Identities=11%  Similarity=0.042  Sum_probs=55.3

Q ss_pred             CCchhHhHHHHHhhhHHhhhhc---cCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccc
Q psy11396         22 INNDDIDKSIKKNNSKIINDTI---SYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKS   98 (829)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~   98 (829)
                      .+.+++...    +.+.++.++   |. +++.|+++..|..++|+ |||.++||..+|+..+|+.++....+..+|...+
T Consensus         4 m~~~~i~~~----v~~~i~~~l~~~~~-~~~~i~~d~~l~~dlgl-DSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l   77 (88)
T 2l4b_A            4 MVSEEIKAQ----VMESVIGCLKLNDE-QKQILSGTTNLAKDFNL-DSLDFVDLIMSLEERFSLEISDEDAQKLETVDDI   77 (88)
T ss_dssp             SSCHHHHHH----HHHHHHHHHTCCHH-HHHSCCTTSCTTTTTTC-CHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHH
T ss_pred             CCHHHHHHH----HHHHHHHHHhhCCC-CHhhCCCCCchhhccCC-cHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHH
Confidence            344555444    555556666   43 35689999999559999 9999999999999999999998876777776555


Q ss_pred             cc
Q psy11396         99 KN  100 (829)
Q Consensus        99 ~~  100 (829)
                      +.
T Consensus        78 ~~   79 (88)
T 2l4b_A           78 CR   79 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=97.01  E-value=0.00043  Score=79.43  Aligned_cols=96  Identities=18%  Similarity=0.072  Sum_probs=68.8

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHH-hcCCccCHHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL-FTASEFKGKE-  725 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~l-l~g~~~~a~e-  725 (829)
                      ...|+|++|.|+|.|||+.. ..||++|+.++ +++++....+      .-...-.-.++..+|.+++ .+|+.+++++ 
T Consensus       180 ~giP~Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~v------i~~~~~~~~~d~~~A~el~~~tge~v~~e~l  252 (587)
T 1pix_A          180 LGIPVIVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAGI------MGGMNPKGHVDLEYANEIADMVDRTGKTEPP  252 (587)
T ss_dssp             TTCCEEEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCTT------CCSCCSSSSCCHHHHHHHHHHHHTTCCCCCS
T ss_pred             CCCCEEEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHHH------HhhhccccccchhHHHHHHHHhCCccChhhc
Confidence            78999999999999999999 89999999876 8877732211      0000001236899999999 8898887665 


Q ss_pred             ------HHHcCCcccccChhhHHHHHHHHHHHHhc
Q psy11396        726 ------LKERGISMPVLPRKQVLFYSLKLAKKLSL  754 (829)
Q Consensus       726 ------A~~~GLv~~v~~~~~l~~~~~~~a~~i~~  754 (829)
                            +.+.|++|.+++.++   ++.+.++++..
T Consensus       253 gga~~h~~~~GvvD~vv~~e~---~a~~~~r~~ls  284 (587)
T 1pix_A          253 GAVDIHYTETGFMREVYASEE---GVLEGIKKYVG  284 (587)
T ss_dssp             SBHHHHTTTSCCSCEEESSHH---HHHHHHHHHHH
T ss_pred             ccHHHHHhhcCceeEecCCHH---HHHHHHHHHHH
Confidence                  236999999998764   34444444443

>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}

Probab=96.93  E-value=0.00079  Score=58.23  Aligned_cols=56  Identities=5%  Similarity=0.039  Sum_probs=49.9

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDT   87 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t   87 (829)
                      .+.+.|++.++..+|.+ ++.|.|+..|..|||. |||..|||-..|+..+|+.+|..
T Consensus        14 ~I~~~V~~ilaE~lev~-~e~Vtpda~l~dDLgl-DSLd~VeLVm~lE~~fGi~ipd~   69 (102)
T 2l9f_A           14 GALELVRHLVAERAELP-VEVLRDDSRFLDDLHM-SSITVGQLVNEAARAMGLSAVAM   69 (102)
T ss_dssp             CHHHHHHHHHHHHTTSC-SSSCCTTCBTTTTSCC-CHHHHHHHHHHHHHHHTCSTTSS
T ss_pred             HHHHHHHHHHHHHHCCC-HHHcCCCcchhhhcCC-cHHHHHHHHHHHHHHhCCCCCcc
Confidence            46677888888889985 5689999999999999 99999999999999999998765

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=96.93  E-value=0.0049  Score=69.21  Aligned_cols=147  Identities=13%  Similarity=0.149  Sum_probs=113.5

Q ss_pred             CCCCEEEEec-ccccchhh-hhhhccccccccc-------cceeccccccccccCCCcceecccccc-CHHHHHHH--Hh
Q psy11396        649 CKIPVIAAMQ-GHAIGAGW-AMGLFCDYTIFSE-------ESVYQSPYMRYGFTPGAGSTLIFPQRF-GKILSREI--LF  716 (829)
Q Consensus       649 ~~kp~Iaav~-G~a~GgG~-~lal~cD~~ia~~-------~a~f~~~e~~~Gl~p~~g~~~~l~r~i-G~~~a~e~--ll  716 (829)
                      ...-.+|.|. |.|+.|-+ +|+++||..++-+       .+.+.+.+.++|..|..-+..+|.+++ |..-..+.  -.
T Consensus       374 ~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  453 (556)
T 2w3p_A          374 SSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSR  453 (556)
T ss_dssp             CSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCCEECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTT
T ss_pred             cchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCceeEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHH
Confidence            4555777775 99999976 8999999988842       278999999999999888888888765 43332222  34


Q ss_pred             cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHH-HHHHHHHHHHHhhhcCChH
Q psy11396        717 TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLS-TIFLHELTMHDYTFVNNPS  795 (829)
Q Consensus       717 ~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~-~~~~~e~~~~~~~~~~~~~  795 (829)
                      .|+++++++|.++|||+...++=+-+++++-..+.=++.+|.++-.+...++-.-.+..+ .-+-....++...+ ..|+
T Consensus       454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  532 (556)
T 2w3p_A          454 IGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIF-NRPN  532 (556)
T ss_dssp             TTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHSSCSCCCHHHHHHTHHHHHHHHHH-TSHH
T ss_pred             hCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcchhccchhhcccCCchhhhhHHHHHhHHHHHHhh-cCCC
Confidence            499999999999999999888778889998888888999999999998888866555544 44455566666666 4554


Q ss_pred             H
Q psy11396        796 V  796 (829)
Q Consensus       796 ~  796 (829)
                      .
T Consensus       533 ~  533 (556)
T 2w3p_A          533 A  533 (556)
T ss_dssp             H
T ss_pred             C
Confidence            4

>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A

Probab=96.91  E-value=0.0006  Score=67.51  Aligned_cols=145  Identities=13%  Similarity=0.083  Sum_probs=85.6

Q ss_pred             cCCcccccccccccchhhhcccccce--eeeeeCCC----CeeeccCChhhhhhhhcccccccccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYK--VIIITGYE----NYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g----~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Ia  655 (829)
                      .-++++++.+.+...|..++.+...+  .+.|.+.|    +....-+++.+-....+            .+...+.|+..
T Consensus        34 ~~~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~aglaIyd------------~m~~~~~~V~t  101 (205)
T 4gm2_A           34 SSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVD------------VINYISSDVYT  101 (205)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHHHHHHHHHH------------HHHHSSSCEEE
T ss_pred             CCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHHHHHHHHH------------HHHhcCCCEEE
Confidence            45566667777777776666433223  33344333    01111144433222222            12235778999


Q ss_pred             Eecccccchhhhhhhccc--cccccccceeccccccccccCCCccee-----------------cccccc--CHHHHHHH
Q psy11396        656 AMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRF--GKILSREI  714 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~i--G~~~a~e~  714 (829)
                      .+-|.|.+.|..|++++|  .|++.+++++.+-....|..- +-..-                 .+.+.-  ......+.
T Consensus       102 ~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~-G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~  180 (205)
T 4gm2_A          102 YCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPF-NQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNV  180 (205)
T ss_dssp             EEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCS-SCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             EEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccc-cCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence            999999999999999999  499999999887666544311 11110                 011111  12334444


Q ss_pred             HhcCCccCHHHHHHcCCcccccChh
Q psy11396        715 LFTASEFKGKELKERGISMPVLPRK  739 (829)
Q Consensus       715 ll~g~~~~a~eA~~~GLv~~v~~~~  739 (829)
                      +-....++|+||+++||||+|+..|
T Consensus       181 m~rd~~msa~EA~eyGlID~V~~~e  205 (205)
T 4gm2_A          181 LERDKYFNADEAVDFKLIDHILEKE  205 (205)
T ss_dssp             TTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred             hcCCcccCHHHHHHcCCccEeecCC
Confidence            5555669999999999999998653

>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A

Probab=96.79  E-value=0.00076  Score=72.63  Aligned_cols=68  Identities=4%  Similarity=-0.069  Sum_probs=58.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSI  103 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~~  103 (829)
                      +.+.+.++.+.|||.+   .|+++..|. ++|. |||++++|.++|++.+|+.++....|++||+..++.+..
T Consensus        12 ~e~~l~~~~~~~l~~~---~i~~~~~ff-~lGg-dSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~   79 (329)
T 3tej_A           12 SETIIAAAFSSLLGCD---VQDADADFF-ALGG-HXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIID   79 (329)
T ss_dssp             HHHHHHHHHHHHHTC----CCSTTCBTT-TTTC-CHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC---CCCCCCCHH-HcCC-cHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHH
Confidence            3445567778899984   499999999 9999 999999999999999999999999999999988776543

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=96.76  E-value=0.00072  Score=78.70  Aligned_cols=148  Identities=11%  Similarity=0.016  Sum_probs=95.1

Q ss_pred             cccccccccchhhhcccccceeeeeeCCCCeeecc-CChhhhhhhhcccccccccccccccccCCCCEEEEecccccchh
Q psy11396        587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACG-GTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAG  665 (829)
Q Consensus       587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G-~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG  665 (829)
                      .....++...|..+.+|+.++.|+|.=.    |.| +++.......+....+         ....|||||.+++ +.-+|
T Consensus        69 ~~~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~~I~~~i~~~---------k~~gkpvva~~~~-aas~~  134 (593)
T 3bf0_A           69 ENSLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQYIGKALKEF---------RDSGKPVYAVGEN-YSQGQ  134 (593)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHHHHHHHHHHH---------HHTTCCEEEEESC-EEHHH
T ss_pred             ccCHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHHHHHHHHHHH---------HhcCCeEEEEEcc-chhHH
Confidence            3457788889999999999999999743    334 6665544443322221         1136999999875 66678


Q ss_pred             hhhhhccccccccccceeccccccc------------cccCCC---c-----ceec------------c-----------
Q psy11396        666 WAMGLFCDYTIFSEESVYQSPYMRY------------GFTPGA---G-----STLI------------F-----------  702 (829)
Q Consensus       666 ~~lal~cD~~ia~~~a~f~~~e~~~------------Gl~p~~---g-----~~~~------------l-----------  702 (829)
                      ..|+++||-+++.+.+.++...+..            |+-+..   |     +..+            +           
T Consensus       135 y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~~~~  214 (593)
T 3bf0_A          135 YYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNY  214 (593)
T ss_dssp             HHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            8999999999999998887766542            221100   0     0000            0           


Q ss_pred             ----c--cccCHHHHHHHHhc-------CCccCHHHHHHcCCcccccChhhHHHHHHHH
Q psy11396        703 ----P--QRFGKILSREILFT-------ASEFKGKELKERGISMPVLPRKQVLFYSLKL  748 (829)
Q Consensus       703 ----~--r~iG~~~a~e~ll~-------g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~  748 (829)
                          .  |.+......+++-.       +..++++||+++||||++...+++.+...++
T Consensus       215 ~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~~~  273 (593)
T 3bf0_A          215 LNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKE  273 (593)
T ss_dssp             HHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence                0  11222223333333       6889999999999999999777666555443

>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1

Probab=96.69  E-value=0.00051  Score=60.81  Aligned_cols=72  Identities=7%  Similarity=0.025  Sum_probs=51.9

Q ss_pred             CCchhHhHHHHHhhhHHhhhhccCC-CCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceec--cccccccc
Q psy11396         22 INNDDIDKSIKKNNSKIINDTISYD-NSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISY--DNSKKLKS   98 (829)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~f--d~pt~~a~   98 (829)
                      .+++++...|+    +.+..+++.+ +.+.|+++..|. |+|+ |||.++||..+|+..+|+.+|....+  +.+|...+
T Consensus        18 ~~~~~i~~~i~----~il~~~l~~~v~~~~i~~d~~l~-dlGl-DSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l   91 (105)
T 2jq4_A           18 YFQGHMNATIR----EILAKFGQLPTPVDTIADEADLY-AAGL-SSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAI   91 (105)
T ss_dssp             -----CHHHHH----HHHHHTSCCSSCGGGCCTTSCGG-GGTC-CHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHH
T ss_pred             CCHHHHHHHHH----HHHHHHhccCCCcccCCCCCCHh-hcCC-CHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHH
Confidence            34455555544    4555666643 467899999999 9999 99999999999999999999988765  45555444


Q ss_pred             c
Q psy11396         99 K   99 (829)
Q Consensus        99 ~   99 (829)
                      .
T Consensus        92 ~   92 (105)
T 2jq4_A           92 E   92 (105)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}

Probab=96.51  E-value=0.0014  Score=58.03  Aligned_cols=69  Identities=3%  Similarity=0.064  Sum_probs=56.8

Q ss_pred             HHHHHhhhHHhhhhccCCCCCCCcCCCccc-----ccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         29 KSIKKNNSKIINDTISYDNSKKLKSKNLSI-----NNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      ..+++.+.+.++.+++  .++.|.++..|.     .|||+ |||..+||--.|+..+|+.+|........|...+..
T Consensus        18 ~~i~~~i~~il~e~l~--~~~~i~~d~~l~~~~~~~dLgl-DSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~   91 (107)
T 3ce7_A           18 NAVTNYIVGMCQKFLQ--KGEKVTPSSKLEELRTREDRLW-DCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIAD   91 (107)
T ss_dssp             HHHHHHHHHHHHTTBC--TTCCCCTTSCGGGSBBTTSSBC-CHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhC--CccccCCCCcccccCcccccCC-CHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHH
Confidence            4466666777778888  678999999996     69999 999999999999999999999887666666655543

>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1

Probab=96.38  E-value=0.00086  Score=57.76  Aligned_cols=66  Identities=8%  Similarity=-0.060  Sum_probs=22.8

Q ss_pred             hhhHHhhhhccC-------CCCCCCcCCCcccccccccccccHHHHHHHHhhhcCcccc---Cceecccccccccccc
Q psy11396         34 NNSKIINDTISY-------DNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIIN---DTISYDNSKKLKSKNL  101 (829)
Q Consensus        34 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~---~t~~fd~pt~~a~~~~  101 (829)
                      -+.++|+.+++-       -+++.|+++..|. ++|+ |||.++||..+|+..+|+.+|   ....+..+|...+..+
T Consensus         8 ~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~-dlg~-DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~   83 (92)
T 1fh1_A            8 EIISAINKLVKAENGERTSVALGEITTDTELT-SLGI-DSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEA   83 (92)
T ss_dssp             HHHHHHHHHC------------------------------CTTTTHHHHHHHC-----------------CTTTSTHH
T ss_pred             HHHHHHHHHHHhccccccCCCHhhCCCCCCHh-hcCC-ChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHH
Confidence            344555555553       2446899999996 9999 999999999999999999999   6666677776665544

>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=96.19  E-value=0.0088  Score=62.49  Aligned_cols=87  Identities=13%  Similarity=0.014  Sum_probs=60.7

Q ss_pred             CCCCEEEEecccccchhhh-hhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGWA-MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK  727 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~-lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~  727 (829)
                      ...|.|+++.|+|.||+.. +++.+|++++.+++.+++...+.-       ...+-+.+.          -..-+++.++
T Consensus       193 ~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~vi-------~~~~~~~~~----------e~~~~Ae~~~  255 (285)
T 2f9i_B          193 AGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVI-------EQTINEKLP----------DDFQTAEFLL  255 (285)
T ss_dssp             TTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHH-------HHHHTSCCC----------TTTTBHHHHH
T ss_pred             CCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHHHH-------HHHhcccch----------HhHhhHHHHH
Confidence            6799999999999999864 588999999998887776433321       000111111          0112477788


Q ss_pred             HcCCcccccChhhHHHHHHHHHHHH
Q psy11396        728 ERGISMPVLPRKQVLFYSLKLAKKL  752 (829)
Q Consensus       728 ~~GLv~~v~~~~~l~~~~~~~a~~i  752 (829)
                      +.|+||.|++++++.+.+.++...+
T Consensus       256 ~~G~iD~Iv~~~e~r~~l~~~L~~l  280 (285)
T 2f9i_B          256 EHGQLDKVVHRNDMRQTLSEILKIH  280 (285)
T ss_dssp             HTTCCSEECCGGGHHHHHHHHHHHT
T ss_pred             hcCCccEEeChHHHHHHHHHHHHHh
Confidence            9999999999988887777766554

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=96.03  E-value=0.0099  Score=67.25  Aligned_cols=80  Identities=15%  Similarity=0.239  Sum_probs=59.8

Q ss_pred             CCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH--
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL--  726 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA--  726 (829)
                      ..|+|++|.|+|.||+......||++|+.++ +.+++                    -|++..+.  .+|+.+++++.  
T Consensus       177 ~iP~Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP~vI~~--~~ge~v~~E~LGG  234 (531)
T 3n6r_B          177 VVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGPDVVKT--VTNEQVSAEELGG  234 (531)
T ss_dssp             TSCEEEEECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH--HHCCCCCHHHHHB
T ss_pred             CCCEEEEEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCHHHHHH--HhCCccChhhcch
Confidence            4899999999999999977667999999986 66554                    14433333  46789999998  


Q ss_pred             -----HHcCCcccccChh-hHHHHHHHHHHH
Q psy11396        727 -----KERGISMPVLPRK-QVLFYSLKLAKK  751 (829)
Q Consensus       727 -----~~~GLv~~v~~~~-~l~~~~~~~a~~  751 (829)
                           .+.|++|.++++| +..+.+.+++..
T Consensus       235 a~~h~~~sG~~d~v~~~e~~a~~~~r~lls~  265 (531)
T 3n6r_B          235 ATTHTRKSSVADAAFENDVEALAEVRRLVDF  265 (531)
T ss_dssp             HHHHHHTTSCCSEEESSHHHHHHHHHHHHTT
T ss_pred             HHHHhhccCcceEEeCCHHHHHHHHHHHHHh
Confidence                 8999999999875 344444444433

>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A

Probab=95.94  E-value=0.0098  Score=67.32  Aligned_cols=81  Identities=20%  Similarity=0.265  Sum_probs=62.8

Q ss_pred             CCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH--
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL--  726 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA--  726 (829)
                      -.|+|++|.|+|.||+......||++|++++ +.+.+.                    |+...+.  .+|+.+++++.  
T Consensus       169 ~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~~--~~ge~v~~e~LGG  226 (530)
T 3iav_A          169 VIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIKT--VTGEDVGFEELGG  226 (530)
T ss_dssp             TSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHB
T ss_pred             CCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHHH--HhCCcCChhhcch
Confidence            3899999999999999987778999999876 776663                    4444433  46788888875  


Q ss_pred             -----HHcCCcccccChh-hHHHHHHHHHHHH
Q psy11396        727 -----KERGISMPVLPRK-QVLFYSLKLAKKL  752 (829)
Q Consensus       727 -----~~~GLv~~v~~~~-~l~~~~~~~a~~i  752 (829)
                           ...|+++.+++.+ +..+.+++++..+
T Consensus       227 a~~h~~~sGv~d~va~de~~a~~~~r~~ls~l  258 (530)
T 3iav_A          227 ARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYL  258 (530)
T ss_dssp             HHHHHHTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred             HHHHHhccCceeEEecChHHHHHHHHHHHHhc
Confidence                 6899999999875 4666666666655

>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A

Probab=95.74  E-value=0.0086  Score=49.89  Aligned_cols=65  Identities=12%  Similarity=-0.017  Sum_probs=48.6

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCccccccc-ccccccHHHHHHHHhhhcCccccCceec--cccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDD-FDKSINNDDIDKSIKKNNSKIINDTISY--DNSKKLKS   98 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-f~~sl~~~~l~~~l~~~~g~~l~~t~~f--d~pt~~a~   98 (829)
                      +++-+.+.+..++|.+ +..+.++..|. ++| + |||.++||--.|+..+|+.+|.....  ...|....
T Consensus         5 i~~~i~~il~~~~~~~-~~~i~~d~~l~-~~g~l-DSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l   72 (80)
T 1dv5_A            5 IKNGVLDILADLTGSD-DVKKNLDLNLF-ETGLL-DSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKI   72 (80)
T ss_dssp             HHHHHHHHHHHHHTSS-STTTCSSCCSS-TTSSC-CSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHH
T ss_pred             HHHHHHHHHHHHhCCC-cccCCCCcchh-hccCc-ChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHH
Confidence            3344455555666643 46799999999 888 8 99999999999999999999987644  44454433

>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}

Probab=95.56  E-value=0.0051  Score=54.90  Aligned_cols=65  Identities=8%  Similarity=0.059  Sum_probs=52.4

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+-|.+.++.+++      |+++..|..|+|+ |||..+||-..|+..+|+.++........|...+..+
T Consensus        30 ei~~~v~~il~e~l~------I~~d~~l~~dLGl-DSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~   94 (113)
T 2cgq_A           30 AINATIQRILRTDRG------ITANQVLVDDLGF-DSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTS   94 (113)
T ss_dssp             HHHHHHHHHHTCCSC------CCTTCBTTTTTCC-CHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC------CCCCCchhhhcCC-CHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHH
Confidence            455566666777776      9999999669999 9999999999999999999998876666666555443

>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.52  E-value=0.0053  Score=54.30  Aligned_cols=67  Identities=7%  Similarity=-0.012  Sum_probs=56.5

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcC-ccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNS-KIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g-~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.++-..|||.  .+.|+++..|. ++|= +||.+++|..+|++..| +.++..-.|++||...++.+
T Consensus        26 ~E~~La~iW~~vL~~--~~~i~~~ddFF-~lGG-~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~   93 (110)
T 2cq8_A           26 TAEAVRSVWQRILPK--VLEVEDSTDFF-KSGA-ASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQL   93 (110)
T ss_dssp             HHHHHHHHHHHHCSS--CSCCCTTCBHH-HHHC-CTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC--CCCCCCCCCHH-hcCC-hHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHH
Confidence            444555666778982  35799999999 9999 99999999999999999 99998889999998877654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.05  E-value=0.0039  Score=84.00  Aligned_cols=67  Identities=7%  Similarity=0.150  Sum_probs=0.0

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+.++++.+||.++.+.|+++..|. |+|+ |||+|+||||+|.+.+|+.++....++ ++...++..
T Consensus      2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~~-~lG~-DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~ 2191 (2512)
T 2vz8_A         2125 QKDLVKAVAHILGIRDVASINPDSTLV-DLGL-DSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQEL 2191 (2512)
T ss_dssp             ----------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHhCCCcccccCCCCchH-HhCc-chHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHH
Confidence            466788999999998888999999999 9999 999999999999999999999988877 676666554

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=94.96  E-value=0.034  Score=63.05  Aligned_cols=83  Identities=18%  Similarity=0.199  Sum_probs=60.1

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHH----
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGK----  724 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~----  724 (829)
                      -..|+|+++.|+|.||+......||++|+.+++.+++.                    |++..+.  .+|+.++.+    
T Consensus       166 ~~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lgg  223 (523)
T 1on3_A          166 GVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELGG  223 (523)
T ss_dssp             TTSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHS
T ss_pred             CCCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhccc
Confidence            34899999999999999988889999999988776654                    3333332  346666653    


Q ss_pred             -HHH--HcCCcccccCh-hhHHHHHHHHHHHHh
Q psy11396        725 -ELK--ERGISMPVLPR-KQVLFYSLKLAKKLS  753 (829)
Q Consensus       725 -eA~--~~GLv~~v~~~-~~l~~~~~~~a~~i~  753 (829)
                       |..  +.|++|.++++ .++.+.+.+++..+-
T Consensus       224 ae~h~~~~G~vd~vv~d~~~~~~~~r~lL~~lp  256 (523)
T 1on3_A          224 AEAHMAISGNIHFVAEDDDAAELIAKKLLSFLP  256 (523)
T ss_dssp             HHHHHHTTCCCSEEESSHHHHHHHHHHHHHTSC
T ss_pred             HHHHhhccCceEEEeCCHHHHHHHHHHHHHhcC
Confidence             323  69999999985 456666666655543

>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}

Probab=94.95  E-value=0.012  Score=61.94  Aligned_cols=65  Identities=15%  Similarity=0.045  Sum_probs=56.8

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      ++-++..++.+|  ..++.++++..|. ++|+ ||+.+++|..++++. |..++.+..|++||......+
T Consensus       217 ~dwlr~~va~~L--~~~~~i~~~~nL~-~lGl-DSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~  281 (287)
T 2fq1_A          217 KAALREVILPLL--DESDEPFDDDNLI-DYGL-DSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKL  281 (287)
T ss_dssp             HHHHHHHHGGGC--CCSSCCCTTSCSG-GGTC-CTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHH
T ss_pred             HHHHHHHHHHHh--CCHhhcCCCCCHH-HhCc-cHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHH
Confidence            345667899999  5667899999999 9999 999999999999998 999999999999998766544

>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B

Probab=94.94  E-value=0.043  Score=62.35  Aligned_cols=80  Identities=21%  Similarity=0.221  Sum_probs=58.1

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL-  726 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA-  726 (829)
                      ...|+|++|.|+|.|||......||++|+.+. +.+.+                    -|+...+.  .+|+.+++++. 
T Consensus       196 ~giP~Isvv~G~~~GGga~~~a~~d~vim~e~~a~i~~--------------------aGP~vik~--~~ge~~~~e~LG  253 (555)
T 3u9r_B          196 RGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFL--------------------AGPPLVKA--ATGEVVSAEELG  253 (555)
T ss_dssp             TTCCEEEEECSCCBGGGGHHHHTSSEEEEETTTCBCBS--------------------SCHHHHHH--HHCCCCCHHHHH
T ss_pred             CCCCEEEEEecCCCccHHHHHHhCCceEEecCCceEEE--------------------ccHHHHHH--HhcCccChhhcc
Confidence            57899999999999999999899999887764 43332                    13333332  56899999988 


Q ss_pred             ------HHcCCcccccChhh-HHHHHHHHHH
Q psy11396        727 ------KERGISMPVLPRKQ-VLFYSLKLAK  750 (829)
Q Consensus       727 ------~~~GLv~~v~~~~~-l~~~~~~~a~  750 (829)
                            ...|++|.++++++ ....+++++.
T Consensus       254 Ga~~h~~~sGv~d~v~~de~~a~~~~r~~ls  284 (555)
T 3u9r_B          254 GADVHCKVSGVADHYAEDDDHALAIARRCVA  284 (555)
T ss_dssp             BHHHHHHTTCSCSEEESSHHHHHHHHHHHHH
T ss_pred             chhhhhhccCceeEEeCCHHHHHHHHHHHHH
Confidence                  78999999998663 2333444433

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=94.40  E-value=0.056  Score=61.34  Aligned_cols=83  Identities=17%  Similarity=0.231  Sum_probs=59.8

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-c-eeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHH--
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-S-VYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGK--  724 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a-~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~--  724 (829)
                      -..|.|+++.|+|.||+......||++|+.++ + .+++.                    |++..+.  .+|+.++.+  
T Consensus       162 ~~iP~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a--------------------GP~vI~~--~~ge~~~~e~l  219 (522)
T 1x0u_A          162 GVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT--------------------GPEITKV--VLGEEVSFQDL  219 (522)
T ss_dssp             TTSCEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEESS--------------------CHHHHHH--TTCCCCCHHHH
T ss_pred             CCCcEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEec--------------------CHHHHHH--HhCCcCChhhc
Confidence            34899999999999999988889999999988 7 55551                    3333322  346666653  


Q ss_pred             ---HHH--HcCCcccccCh-hhHHHHHHHHHHHHh
Q psy11396        725 ---ELK--ERGISMPVLPR-KQVLFYSLKLAKKLS  753 (829)
Q Consensus       725 ---eA~--~~GLv~~v~~~-~~l~~~~~~~a~~i~  753 (829)
                         |..  +.|++|.++++ .++.+.+.+++..+-
T Consensus       220 ggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~lp  254 (522)
T 1x0u_A          220 GGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLP  254 (522)
T ss_dssp             HBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSC
T ss_pred             chHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhcc
Confidence               322  69999999985 557777777766654

>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}

Probab=94.19  E-value=0.017  Score=73.81  Aligned_cols=67  Identities=7%  Similarity=0.040  Sum_probs=59.3

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      +.+.+.++.+.|||.   +.|+.+..|. ++|. |||++++|.++|++.+|+.++....|++||+..++.+.
T Consensus       973 ~e~~l~~~~~~vL~~---~~i~~~~~ff-~lGg-~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~ 1039 (1304)
T 2vsq_A          973 MEETIAQIWSEVLGR---KQIGIHDDFF-ALGG-HALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYL 1039 (1304)
T ss_dssp             HHHHHHHHHHHHHTC---SCCCTTCCTT-TTTC-CHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCC---CccCCCCCHH-HhCC-ChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHH
Confidence            445566777889997   4799999999 9999 99999999999999999999999999999998887654

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=94.18  E-value=0.074  Score=60.54  Aligned_cols=82  Identities=20%  Similarity=0.217  Sum_probs=58.0

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHH---
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGK---  724 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~---  724 (829)
                      -..|.|+++.|+|.||+......||++|+.++ +.+++.                    |++..+.  .+|+.++.+   
T Consensus       179 ~~iP~Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~e~lg  236 (548)
T 2bzr_A          179 GVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELG  236 (548)
T ss_dssp             TTSCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHH
T ss_pred             CCCcEEEEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCChHhcc
Confidence            34899999999999999987779999999987 766554                    4433333  346666654   


Q ss_pred             --HH--HHcCCcccccChh-hHHHHHHHHHHHH
Q psy11396        725 --EL--KERGISMPVLPRK-QVLFYSLKLAKKL  752 (829)
Q Consensus       725 --eA--~~~GLv~~v~~~~-~l~~~~~~~a~~i  752 (829)
                        |.  .+.|++|.+++.+ ++.+.+.+++..+
T Consensus       237 gae~h~~~sG~~d~vv~d~~~~~~~~r~lls~l  269 (548)
T 2bzr_A          237 GAHTHMAKSGTAHYAASGEQDAFDYVRELLSYL  269 (548)
T ss_dssp             BHHHHHHTSSCCSEEESSHHHHHHHHHHHHTTS
T ss_pred             cHHHHhhccCceeEEeCCHHHHHHHHHHHHHhc
Confidence              32  3699999999854 4555555555444

>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}

Probab=94.05  E-value=0.033  Score=48.94  Aligned_cols=57  Identities=11%  Similarity=0.125  Sum_probs=47.3

Q ss_pred             HHhhhHHhhhhccCCC-CCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396         32 KKNNSKIINDTISYDN-SKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI   88 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~   88 (829)
                      ++-+.+.++.+|+-+. ++.|.++..|..|+|+-|||..+||-..|+..+|+.+|..-
T Consensus        26 ~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~ee   83 (105)
T 2lki_A           26 LEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDE   83 (105)
T ss_dssp             HHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGG
T ss_pred             HHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHH
Confidence            3445666677777653 67899999998579988999999999999999999999876

>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}

Probab=93.65  E-value=0.024  Score=64.83  Aligned_cols=65  Identities=6%  Similarity=0.014  Sum_probs=56.8

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+.++.+.|||.+   .|+.+..|. ++|- |||.|++|..+|++..|+.++..-.|.+||...++.+
T Consensus        12 e~~l~~iw~~vL~~~---~i~~~d~ff-~lGg-dSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~   76 (520)
T 2jgp_A           12 EARLAQVWEQVLNVP---QVGALDDFF-ALGG-HSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAF   76 (520)
T ss_dssp             HHHHHHHHHHHHTCS---CCCTTCBTT-TTTC-CHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHH
T ss_pred             HHHHHHHHHHHhCCC---CCCCCccHH-Hhcc-cHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHH
Confidence            344556678899974   799999999 9999 9999999999999999999999999999998877654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=93.25  E-value=0.015  Score=66.35  Aligned_cols=66  Identities=9%  Similarity=0.054  Sum_probs=0.0

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      +.+.+.++...|||.+   .|+++..|. ++|- |||.+++|.++|++ .|..++....|++||...++.+.
T Consensus        46 ~e~~l~~~w~~~l~~~---~i~~~~~ff-~lGg-~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~  111 (508)
T 4f6l_B           46 IEQTFVDVFGEVLKQN---DVGVDDDFF-ELGG-NSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYM  111 (508)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCC---CCCCCCChH-HcCc-hHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHH
Confidence            4566777888899974   799999999 9999 99999999999986 89999999999999998887653

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=93.09  E-value=0.13  Score=58.36  Aligned_cols=82  Identities=13%  Similarity=0.192  Sum_probs=56.6

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHH---
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGK---  724 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~---  724 (829)
                      ...|+|++|.|+|.|||......||++|+.++ +.+++                    .|+...+.  .+|+.++.+   
T Consensus       169 ~~iP~Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi~~--~~ge~v~~e~lg  226 (527)
T 1vrg_A          169 GVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVIKA--VTGEEISQEDLG  226 (527)
T ss_dssp             TTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH--HHCCCCCHHHHH
T ss_pred             CCCCEEEEEeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHHHH--HhCCCCCccccc
Confidence            45899999999999999987779999999987 66333                    23333332  346666653   


Q ss_pred             --HHH--HcCCcccccChh-hHHHHHHHHHHHH
Q psy11396        725 --ELK--ERGISMPVLPRK-QVLFYSLKLAKKL  752 (829)
Q Consensus       725 --eA~--~~GLv~~v~~~~-~l~~~~~~~a~~i  752 (829)
                        |..  +.|++|.+++++ ++.+.+.++...+
T Consensus       227 gae~~~~~~G~vd~vv~d~~~~~~~~~~~Ls~l  259 (527)
T 1vrg_A          227 GAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYL  259 (527)
T ss_dssp             BHHHHHHTSCCCSEEESSHHHHHHHHHHHHTTS
T ss_pred             cHHHHhhcccceEEEecCHHHHHHHHHHHHHhc
Confidence              322  699999999854 4555555554443

>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}

Probab=93.00  E-value=0.036  Score=64.89  Aligned_cols=65  Identities=12%  Similarity=-0.021  Sum_probs=55.3

Q ss_pred             HhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         33 KNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      +.+.+++..+|+.  .+.+..+..|. ++|- |||.|++|.++|++ .|..++....|++||...++.+.
T Consensus       548 ~~l~~~~~~~l~~--~~~~~~~d~Ff-~lGg-dSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l  612 (617)
T 3rg2_A          548 AALREVILPLLDE--SDEPFDDDNLI-DYGL-DSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLL  612 (617)
T ss_dssp             HHHHHHHGGGSCT--TCCCCTTSCGG-GGTC-CHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhcc--CCCCCCCCChh-hcCc-cHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHH
Confidence            3456677888873  35788899999 9999 99999999999997 58899999999999998887654

>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*

Probab=92.98  E-value=0.018  Score=67.60  Aligned_cols=67  Identities=6%  Similarity=-0.108  Sum_probs=0.0

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhh-hcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKK-NNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~-~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      ..+.+.++...|||.   +.++.+..|. ++|- |||.|++|.++|++ ..|+.++...+|++||...++.+.
T Consensus       525 ~e~~l~~iw~~vL~~---~~~~~~d~Ff-~lGG-dSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l  592 (620)
T 4dg8_A          525 DQRGCAQLWSELLGC---EVGAADQDFF-LCGG-NSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLL  592 (620)
T ss_dssp             -------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHhCC---CCCCCCCChh-hccC-cHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHH
Confidence            345566778889997   4688999999 9999 99999999999998 799999999999999999887764

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=92.36  E-value=0.26  Score=55.91  Aligned_cols=104  Identities=13%  Similarity=-0.049  Sum_probs=62.9

Q ss_pred             cCCCCEEEEecccccchhhhhh----hccccccccccceecccccc--ccccCCCccee-ccccccCHHHHHHHHhcCCc
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMG----LFCDYTIFSEESVYQSPYMR--YGFTPGAGSTL-IFPQRFGKILSREILFTASE  720 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~la----l~cD~~ia~~~a~f~~~e~~--~Gl~p~~g~~~-~l~r~iG~~~a~e~ll~g~~  720 (829)
                      ....|+|+.|-|.|.|||+...    +.+|++++.+++.+++-...  ..+.-...... -=+..+-.....+.  .-..
T Consensus       396 ~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y--~~~~  473 (522)
T 1x0u_A          396 EATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEY--RKLF  473 (522)
T ss_dssp             HCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHH--HHHH
T ss_pred             hCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHH--HHhc
Confidence            3779999999999999987443    34999999988877663333  11110000000 00001111111111  1112


Q ss_pred             cCHHHHHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        721 FKGKELKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       721 ~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                      -++..+++.|+||.|+++.++.+......+.+.
T Consensus       474 ~~~~~~~~~G~iD~II~p~~tR~~L~~~L~~~~  506 (522)
T 1x0u_A          474 ANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLK  506 (522)
T ss_dssp             SSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred             CCHHHHHhcCCCcEeECHHHHHHHHHHHHHHHh
Confidence            456889999999999999888887777666654

>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A

Probab=92.10  E-value=0.19  Score=58.53  Aligned_cols=80  Identities=13%  Similarity=0.068  Sum_probs=52.8

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCcc--CHHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEF--KGKE-  725 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~--~a~e-  725 (829)
                      -..|+|++|.|+|.|||..+...||++|+.+++.+.+.                    |+...+.  .+|+.+  +.++ 
T Consensus       245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~iflt--------------------GP~vIk~--~tGeeV~~s~eeL  302 (758)
T 3k8x_A          245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILT--------------------GAPAINK--MLGREVYTSNLQL  302 (758)
T ss_dssp             TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESS--------------------CHHHHHH--HHTSCCCSCTHHH
T ss_pred             cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEEe--------------------CHHHHHH--HhCCccccCchhc
Confidence            35799999999999999999999999999987532211                    2222222  145544  4333 


Q ss_pred             -----HHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        726 -----LKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       726 -----A~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                           ....|+++.+++.|+   ++...++++.
T Consensus       303 GGA~vh~~sGvad~va~dd~---eal~~ir~lL  332 (758)
T 3k8x_A          303 GGTQIMYNNGVSHLTAVDDL---AGVEKIVEWM  332 (758)
T ss_dssp             HSHHHHTTTTSSSEEESSHH---HHHHHHHHHH
T ss_pred             chhhHHHhcCCeeEEecCHH---HHHHHHHHHH
Confidence                 246899999997652   3334444443

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*

Probab=90.88  E-value=0.28  Score=56.11  Aligned_cols=101  Identities=16%  Similarity=0.064  Sum_probs=59.1

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceeccccccc--cccCCCcceeccccc---cCHHHHHHHHhcCCccCH
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY--GFTPGAGSTLIFPQR---FGKILSREILFTASEFKG  723 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~--Gl~p~~g~~~~l~r~---iG~~~a~e~ll~g~~~~a  723 (829)
                      ...|+|++|.|+|.|||...++++|++++.+++.+.+....+  |+-|.+-   +.+.-   +......+-..+.+.+.+
T Consensus       181 ~~iP~Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g~---~~~~~~~~~~~~~~ge~~vs~eeLGG  257 (588)
T 3gf3_A          181 LGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKGY---IDDEAAEQIIAAQIENSKLKVPAPGS  257 (588)
T ss_dssp             TTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTB
T ss_pred             CCCCEEEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCcccc---ccccchhhhhhhhccccccChhhccc
Confidence            578999999999999998668888888888888777754432  2212110   11110   111111222235566666


Q ss_pred             HHHH--HcCCcccccChhh-HHHHHHHHHHHH
Q psy11396        724 KELK--ERGISMPVLPRKQ-VLFYSLKLAKKL  752 (829)
Q Consensus       724 ~eA~--~~GLv~~v~~~~~-l~~~~~~~a~~i  752 (829)
                      .+..  ..|++|.+++.|+ ..+.+++++..|
T Consensus       258 a~~h~~~sGv~d~~a~de~~al~~~r~~ls~L  289 (588)
T 3gf3_A          258 VPIHYDETGFFREVYQNDLGVIDGIKKYISYL  289 (588)
T ss_dssp             HHHHTTTSCCSCEEESSHHHHHHHHHHHHHTS
T ss_pred             hhhhccccccceEEeCCHHHHHHHHHHHHHhC
Confidence            6666  6999999998663 444444444433

>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*

Probab=88.46  E-value=0.63  Score=54.78  Aligned_cols=36  Identities=22%  Similarity=0.158  Sum_probs=31.8

Q ss_pred             CCCEEEEecccccchhhhhhhccccccccccceecc
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS  685 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~  685 (829)
                      ..|+|++|.|+|.|||..+...||++|+.+++.+.+
T Consensus       259 ~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~l  294 (793)
T 2x24_A          259 EIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIIL  294 (793)
T ss_dssp             HSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEES
T ss_pred             CCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEe
Confidence            589999999999999999999999999998755433

>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}

Probab=88.38  E-value=0.099  Score=55.35  Aligned_cols=39  Identities=8%  Similarity=-0.085  Sum_probs=11.5

Q ss_pred             cccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         62 DFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        62 gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      |. |||+|++|++||++.+|++++...+|++||...++..
T Consensus         1 GG-dSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~~l   39 (316)
T 2px6_A            1 GS-HNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLMRL   39 (316)
T ss_dssp             --------------------------CCCCCTTSCSEEES
T ss_pred             CC-chHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeEEc
Confidence            66 9999999999999999999999999999998877643

>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A

Probab=87.73  E-value=0.24  Score=54.47  Aligned_cols=56  Identities=5%  Similarity=-0.050  Sum_probs=45.4

Q ss_pred             ceeEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhh-hcccccceeeeee
Q psy11396        555 IFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSY-INSSVQYKVIIIT  612 (829)
Q Consensus       555 ~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~-~~~d~~vr~vVl~  612 (829)
                      .++||++||+++++|+++++++.+|+..++..  -+.+|++++.. .+.+-..|++++.
T Consensus         2 ~~~ll~lSA~s~~aL~~~~~~l~~~l~~~~~~--~l~dla~tl~~~rr~~~~~R~avva   58 (401)
T 4amm_A            2 DHELVVCGAPDAAALTGLLTRVRAAATALSRP--ELTDLAAGLAAAHRGDVPARFAAAV   58 (401)
T ss_dssp             CSEEEEEEESSHHHHHHHHHHHHHHHTTCCHH--HHHHHHHHHHHHSCSSCSEEEEEEE
T ss_pred             CCeEEEEECCCHHHHHHHHHHHHHHHHhCCCC--CHHHHHHHHhhccccCCCceEEEEE
Confidence            36899999999999999999999999987642  37788888884 4555467887776

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=86.57  E-value=1  Score=51.56  Aligned_cols=103  Identities=12%  Similarity=0.062  Sum_probs=63.5

Q ss_pred             cccCCCCEEEEecccccchhhhhhhc----c--ccccccccceeccccccccccCCCcceecccc-ccCH---------H
Q psy11396        646 PLYCKIPVIAAMQGHAIGAGWAMGLF----C--DYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ-RFGK---------I  709 (829)
Q Consensus       646 ~~~~~kp~Iaav~G~a~GgG~~lal~----c--D~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r-~iG~---------~  709 (829)
                      +.....|+|+.|-|.++|||+..+..    +  |++++.++++++       +..+.+.+..+-+ ..-.         .
T Consensus       440 ~a~a~vP~itvI~g~~~Ggg~~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~  512 (587)
T 1pix_A          440 IQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQP  512 (587)
T ss_dssp             HHTCCCCEEEEECSEEETTHHHHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred             HHhCCCCEEEEEcCCCccHHHHHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHH
Confidence            34478999999999999998643322    4  877766666554       3333332222211 1100         0


Q ss_pred             H---HHHHH--hcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCC
Q psy11396        710 L---SREIL--FTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLS  756 (829)
Q Consensus       710 ~---a~e~l--l~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~  756 (829)
                      .   ..++.  +. +..++..|.+.|+||.|+++.++........+.+...+
T Consensus       513 ~~~~~~~~~~~y~-~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~  563 (587)
T 1pix_A          513 TIDKMNNLIQAFY-TKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP  563 (587)
T ss_dssp             HHHHHHHHHHHHH-HTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHH-HhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence            0   01110  11 24788999999999999999888887777777776555

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=85.81  E-value=0.58  Score=53.07  Aligned_cols=99  Identities=13%  Similarity=0.121  Sum_probs=59.9

Q ss_pred             cCCCCEEEEecccccchhhhhhh----ccccccccccceeccccccccccCCCcceeccccc-c----CHHHHHH-HH--
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMGL----FCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQR-F----GKILSRE-IL--  715 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~lal----~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~-i----G~~~a~e-~l--  715 (829)
                      ....|+|+.|-|.|.|||+....    .+|++++.+++++       ++..+.+.+..+-+. +    -....++ +.  
T Consensus       401 ~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~-------~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~  473 (527)
T 1vrg_A          401 EATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEI-------AVMGPEGAANIIFKREIEASSNPEETRRKLIEE  473 (527)
T ss_dssp             HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHH
T ss_pred             cCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeE-------EecCHHHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence            36799999999999998874332    3777666655554       444333332222221 1    0111111 21  


Q ss_pred             hcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        716 FTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       716 l~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                      +.-+.-++..+.+.|+||+|+++.++.+......+.+.
T Consensus       474 y~~~~~~p~~~~~~g~iD~II~p~~tR~~l~~~L~~l~  511 (527)
T 1vrg_A          474 YKQQFANPYIAASRGYVDMVIDPRETRKYIMRALEVCE  511 (527)
T ss_dssp             HHHHTSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred             HHHhhCCHHHHHHcCCCCeeeCHHHHHHHHHHHHHHHh
Confidence            11113567889999999999999888777666666554

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=84.39  E-value=1.8  Score=49.20  Aligned_cols=98  Identities=15%  Similarity=0.178  Sum_probs=58.2

Q ss_pred             CCCCEEEEecccccchhhhhh----hccccccccccceeccccccccccCCCcceecccc-ccCH--------HHHH-HH
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMG----LFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ-RFGK--------ILSR-EI  714 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~la----l~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r-~iG~--------~~a~-e~  714 (829)
                      ...|+|+.|-|.|+|||+..+    +.+|++++.++++++.       ..+.+....+-+ .+-.        ...+ ++
T Consensus       419 ~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~V-------mgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~  491 (548)
T 2bzr_A          419 ATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAV-------MGASGAVGFVYRQQLAEAAANGEDIDKLRLRL  491 (548)
T ss_dssp             CCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTCCC----------CHHHHHHH
T ss_pred             CCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEEe-------cCHHHHHHHHhhhHHhhhhcccccHHHHHHHH
Confidence            679999999999999987543    3488877776665543       322222222221 1111        0111 12


Q ss_pred             Hh--cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        715 LF--TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       715 ll--~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                      .-  .-..-++..+.+.|+||.|+++.++........+.+.
T Consensus       492 ~~~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~  532 (548)
T 2bzr_A          492 QQEYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRLLE  532 (548)
T ss_dssp             HHHHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHHTT
T ss_pred             HHHHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHHHh
Confidence            11  0112345789999999999999888776665555543

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=81.92  E-value=1.1  Score=50.74  Aligned_cols=99  Identities=11%  Similarity=0.011  Sum_probs=59.5

Q ss_pred             cCCCCEEEEecccccchhhhhhhc----cccccccccceeccccccccccCCCcceeccccc-c----CHHHHH-HHHh-
Q psy11396        648 YCKIPVIAAMQGHAIGAGWAMGLF----CDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQR-F----GKILSR-EILF-  716 (829)
Q Consensus       648 ~~~kp~Iaav~G~a~GgG~~lal~----cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~-i----G~~~a~-e~ll-  716 (829)
                      ....|+|+.|-|.++|||+.-...    +|++++.++       ..+++..+.+.+..+-+. +    -....+ ++.- 
T Consensus       397 ~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~-------a~~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~  469 (523)
T 1on3_A          397 EATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPS-------AEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEE  469 (523)
T ss_dssp             HCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTT-------CEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHH
T ss_pred             cCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCC-------CeEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence            378999999999999998754433    666555554       455544433333222221 1    011111 1211 


Q ss_pred             -cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        717 -TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       717 -~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                       .-..-++..+.+.|+||+|+++.++.+......+.+.
T Consensus       470 y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~  507 (523)
T 1on3_A          470 YQNAFNTPYVAAARGQVDDVIDPADTRRKIASALEMYA  507 (523)
T ss_dssp             HHHHHSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHGG
T ss_pred             HHHhhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHHHHh
Confidence             1112566889999999999999888777666665554

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=80.84  E-value=1  Score=50.80  Aligned_cols=99  Identities=15%  Similarity=0.157  Sum_probs=58.5

Q ss_pred             ccCCCCEEEEecccccchhhhhhh----ccccccccccceeccccccccccCCCcce-eccccccC---HHHHHHHHhcC
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGL----FCDYTIFSEESVYQSPYMRYGFTPGAGST-LIFPQRFG---KILSREILFTA  718 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal----~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~-~~l~r~iG---~~~a~e~ll~g  718 (829)
                      .....|+|+.|-|.++|||+..+.    .+|++++.++++++.       ..+.+.+ ..+.+.+-   ....+.--+.-
T Consensus       408 a~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~V-------m~pegaa~Il~r~~~~~~~~~~~~~~~y~~  480 (531)
T 3n6r_B          408 GEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAV-------MGAKGATEIIHRGDLGDPEKIAQHTADYEE  480 (531)
T ss_dssp             HHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHCCTTTTSTTHHHHHHHHHHH
T ss_pred             HhCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEec-------CCHHHHHHHHhcccccchhHHHHHHHHHHH
Confidence            347899999999999999874333    378877776665544       2222221 12222121   11111111111


Q ss_pred             CccCHHHHHHcCCcccccChhhHHHHHHHHHHHH
Q psy11396        719 SEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL  752 (829)
Q Consensus       719 ~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i  752 (829)
                      +.-++..|.+.|+||.|+++.+.........+.+
T Consensus       481 ~~~~p~~aa~~~~vD~vIdP~~TR~~l~~~l~~~  514 (531)
T 3n6r_B          481 RFANPFVASERGFVDEVIQPRSTRKRVARAFASL  514 (531)
T ss_dssp             HHSSSHHHHHHTSSSEECCGGGHHHHHHHHHHTT
T ss_pred             HhcCHHHHHhcCccCcccCHHHHHHHHHHHHHHH
Confidence            2245678899999999999998877655544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	829
d1j3na1	249	c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {	8e-68
d2gfva1	250	c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {	1e-59
d1e5ma1	250	c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {	5e-54
d1ox0a1	256	c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II	2e-53
d1tqya2	205	c.95.1.1 (A:219-423) Actinorhodin polyketide putat	4e-50
d2ix4a1	270	c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II	5e-48
d2vbaa1	253	c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E	8e-44
d2gfva2	161	c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II	6e-43
d2ix4a2	161	c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II	2e-40
d1j3na2	159	c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II	5e-38
d1e5ma2	161	c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II	8e-38
d1tqyb2	194	c.95.1.1 (B:210-403) Actinorhodin polyketide putat	2e-35
d2vbaa2	151	c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I	2e-33
d1ox0a2	158	c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II	4e-30
d1tqya1	216	c.95.1.1 (A:3-218) Actinorhodin polyketide putativ	6e-28
d1tqyb1	208	c.95.1.1 (B:2-209) Actinorhodin polyketide putativ	2e-24
d1mj3a_	260	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat	6e-21
d1uiya_	253	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The	1e-09
d1dcia_	275	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	4e-06
d1wdka4	310	c.14.1.3 (A:1-310) Fatty oxidation complex alpha s	0.003
d1nzya_	269	c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Ps	0.004

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  223 bits (568), Expect = 8e-68
 Identities = 57/263 (21%), Positives = 90/263 (34%), Gaps = 31/263 (11%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P     + F    L G++ V   P TR+                      
Sbjct: 4   VVVTGLGALTPIGVGQEAFHKAQLAGKSGVR--PITRFDASALPVR-------------- 47

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
                E+       +   E   +D   +  L      +EDAG  P  L     G  VG  
Sbjct: 48  --IAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTG 105

Query: 237 VSDYNKLIT--------DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
           +                 P   + + +     ++  A ++      GP   + TAC++  
Sbjct: 106 IGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGA 165

Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
            A+  A   + LG + + LAGG     TP      +    LS     P+     F    +
Sbjct: 166 DALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225

Query: 344 GFVPGEGVGVLMLKKLKDAKKDG 366
           GFV GEG GVL+L+  + AKK G
Sbjct: 226 GFVMGEGAGVLVLEAYEHAKKRG 248

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score =  201 bits (511), Expect = 1e-59
 Identities = 54/264 (20%), Positives = 104/264 (39%), Gaps = 30/264 (11%)

Query: 116 DIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKM 175
            + + G+    P  N V+  W  LL G++ +S I    +    +       +    C   
Sbjct: 3   RVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSAYATKFAGLVKDFNC--- 57

Query: 176 GSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGC 235
                          IS  E   MD   +  +      ++D+G      + +  G  +G 
Sbjct: 58  ------------EDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGS 105

Query: 236 AVSDYNK--------LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
            +             +   P+  + + +    V+++   ++    L+GP ++I TA +S 
Sbjct: 106 GIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSG 165

Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRA 342
           +  I HA   +  G++ + +AGG    +TP        +  LS     P      +D+  
Sbjct: 166 VHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKER 225

Query: 343 NGFVPGEGVGVLMLKKLKDAKKDG 366
           +GFV G+G G+L+L++ + AKK G
Sbjct: 226 DGFVLGDGAGMLVLEEYEHAKKRG 249

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score =  185 bits (470), Expect = 5e-54
 Identities = 57/263 (21%), Positives = 94/263 (35%), Gaps = 30/263 (11%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P  N ++ +W  L+ GRN +   P TR+   D                  
Sbjct: 4   VVVTGLGAITPIGNTLQDYWQGLMEGRNGIG--PITRFDASDQA---------------C 46

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
                         +   EA+ MD      +      I DA      L+    GV +G  
Sbjct: 47  RFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTG 106

Query: 237 VSDYNKLIT--------DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
           +     L           P   + + +     ++     +  L  +GP     TAC++  
Sbjct: 107 IGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGS 166

Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
            AI  A   +  G +K  + GG     TP  +   + +  LS     P      FD+  +
Sbjct: 167 NAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRD 226

Query: 344 GFVPGEGVGVLMLKKLKDAKKDG 366
           GFV GEG G+L+L++L+ A   G
Sbjct: 227 GFVMGEGSGILILEELESALARG 249

>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score =  184 bits (467), Expect = 2e-53
 Identities = 61/262 (23%), Positives = 90/262 (34%), Gaps = 29/262 (11%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G     P  N  ++FWN+L  G+  +  I   ++   DF   +   I         
Sbjct: 11  VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGIT--KFDHSDFDVHNAAEIQDFPF---- 64

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
                             +    D      L      +  A  +  +L+    GV V   
Sbjct: 65  -----------DKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 113

Query: 237 VSDY--------NKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
           +                 PK      L     ++    V+      G C +I+TACSSS 
Sbjct: 114 IGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSN 173

Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFDQRANG 344
            AI  A  S+  G   + L GG     TP           LS    P      FD+  NG
Sbjct: 174 DAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNG 233

Query: 345 FVPGEGVGVLMLKKLKDAKKDG 366
           FV GEG G+L+L+ L+ A+K G
Sbjct: 234 FVMGEGSGMLVLESLEHAEKRG 255

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  173 bits (438), Expect = 4e-50
 Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 12/208 (5%)

Query: 331 PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAP 390
           P+     FD   +GFV  EG  + +L+    A   G  I+  I G+    +         
Sbjct: 3   PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 62

Query: 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450
           + +           +   +  DI  + AHG+GT+  D  E  A          H     +
Sbjct: 63  DGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKR---ALGEHARRTPV 119

Query: 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW 510
            S+KS +GHS  A G + +   +L+L+H V+PPT N    +    L+  P          
Sbjct: 120 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP---------L 170

Query: 511 DIKNKKKRMAAINSFGFSGTNAHIVLME 538
           + + +K R       GF G  + +VL +
Sbjct: 171 EARERKLRSVLTVGSGFGGFQSAMVLRD 198

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score =  169 bits (428), Expect = 5e-48
 Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 15/268 (5%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + + G+    P    V+  W  L+ G   +  +      +  F +  K      +  K+ 
Sbjct: 3   VVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVA 62

Query: 177 SL----EDIEIFDPLFFNISPSEAEYMDPQQRLF----LQNCWTCIEDAGYNPFSLSGSL 228
           +      +   FD   +  S + A ++               W   E+       +S   
Sbjct: 63  AFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGG 122

Query: 229 CGVFVGCAVSDYNKLITDPKM-YNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
               +   V     +        + + +    V++    VS     QGP  A  TAC++ 
Sbjct: 123 GIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATG 182

Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQR 341
             +I  A   +  G++ + +AGG             S+S  LS      P      FD  
Sbjct: 183 AHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD 242

Query: 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDI 369
            +GFV GEG GV++L++ + AK+ G  I
Sbjct: 243 RDGFVIGEGSGVIVLEEYEHAKRRGAKI 270

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score =  157 bits (396), Expect = 8e-44
 Identities = 44/258 (17%), Positives = 85/258 (32%), Gaps = 13/258 (5%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
             I G+       NN ++   +L  GR+ ++                 +  G       G
Sbjct: 4   AVITGLGIVSSIGNNQQEVLASLREGRSGITFSQ--ELKDSGMRS---HVWGNVKLDTTG 58

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
            ++   +      +I    +              +      G    S  GS      G  
Sbjct: 59  LIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118

Query: 237 VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
                +     K    Y +     S + A ++    + G   +I +AC++S   I +A +
Sbjct: 119 AMRGPR---GLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVE 175

Query: 297 SLILGNSKIALAGGVYIINTPDIHIK-----MSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
            + LG   I  AGG   +             +S     +P+    ++D   +GFV   G 
Sbjct: 176 QIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGG 235

Query: 352 GVLMLKKLKDAKKDGDDI 369
           G++++++L+ A   G  I
Sbjct: 236 GMVVVEELEHALARGAHI 253

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score =  151 bits (381), Expect = 6e-43
 Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 12/172 (6%)

Query: 369 IYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428
           IY  + G+G++ D         N            +   I  + I  + AHGT T  GD 
Sbjct: 2   IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61

Query: 429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN 488
            E +A+      F    +   + S KS  GH   AAG +  I  IL+L+ + +PPTIN +
Sbjct: 62  AEAQAVKTI---FGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLD 118

Query: 489 ILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540
                                   +         NSFGF GTN  ++  +KI
Sbjct: 119 --------NPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF-KKI 161

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score =  143 bits (362), Expect = 2e-40
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 14/173 (8%)

Query: 370 YCIIKGWGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD 427
           Y  + G+G++ D   + IT P    +  +   T+  ++  + PN I  + AH T T +GD
Sbjct: 1   YAELCGYGMSGDA--HHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGD 58

Query: 428 PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY 487
            +E  A+   F++ +      A  S K   GH   AAG +  I  IL++ H V P T+N 
Sbjct: 59  AVEARAIKTVFSEHATS-GTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNV 117

Query: 488 NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540
              +        P   + K           R A  NSFGF GTNA ++    I
Sbjct: 118 KNPDPIFDKRFMPLTTSKK--------MLVRTAMSNSFGFGGTNASLLF-ASI 161

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  136 bits (344), Expect = 5e-38
 Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 14/172 (8%)

Query: 369 IYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428
           IY  + G+G + D        P  K       +  K   I P  +  + AHGT T +GD 
Sbjct: 2   IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61

Query: 429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN 488
            E  A+   F     H     + S KS IGH   AAG +  I  + +L H V+PPTIN  
Sbjct: 62  AEVLAIKRVFGD---HAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLE 118

Query: 489 ILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540
             +  + L+  P            +  K   A  NSF F G NA +   +++
Sbjct: 119 DPDPELDLDFVPE----------PREAKVDYALSNSFAFGGHNAVLAF-KRV 159

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score =  136 bits (343), Expect = 8e-38
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 12/168 (7%)

Query: 369 IYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428
           IY  + G+ +  D        P+ +   R      K   + P  +  + AHGT T   D 
Sbjct: 2   IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61

Query: 429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN 488
            E  A+ ++    +Y+    A+ S KS  GH    +G I  +  ++++    +PPTIN  
Sbjct: 62  TETRAIKQALGNHAYN---IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLE 118

Query: 489 ILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
             +    L+  P            +     +A  NSFGF G N  +  
Sbjct: 119 NPDPECDLDYVP---------GQSRALIVDVALSNSFGFGGHNVTLAF 157

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  130 bits (328), Expect = 2e-35
 Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 18/207 (8%)

Query: 331 PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDD-IYCIIKGWGVNQDGKTNGITA 389
           PD     FD+RA G+VPGEG  +L+L+    A+  G    Y  + G     D       +
Sbjct: 2   PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFD---PAPGS 58

Query: 390 PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCA 449
                  R            P D+ ++ A G G    D  E  A         + +    
Sbjct: 59  GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARA-----IGRVFGREGVP 113

Query: 450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKS 509
           +   K+  G   +  G + ++  ++SL+  V+ PT     +     ++     +  + +S
Sbjct: 114 VTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGID----LVLGEPRS 169

Query: 510 WDIKNKKKRMAAINSFGFSGTNAHIVL 536
                   R A + + G  G N+  VL
Sbjct: 170 TAP-----RTALVLARGRWGFNSAAVL 191

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score =  124 bits (311), Expect = 2e-33
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 20/171 (11%)

Query: 370 YCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPI 429
           Y  I G+G   DG    + AP+ +  +R    +    +     I  L +HGT T +GD  
Sbjct: 1   YAEIVGYGATSDGAD--MVAPSGEGAVRC---MKMAMHGVDTPIDYLNSHGTSTPVGDVK 55

Query: 430 EFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI 489
           E  A+ E F   S       + + K+  GHS  AAGV   I  +L L+H  + P+IN   
Sbjct: 56  ELAAIREVFGDKSPA-----ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEE 110

Query: 490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540
           L+E      +   I T+    ++          NSFGF GTNA +V+  K+
Sbjct: 111 LDEQA----AGLNIVTETTDREL-----TTVMSNSFGFGGTNATLVM-RKL 151

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score =  114 bits (286), Expect = 4e-30
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 15/168 (8%)

Query: 369 IYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428
           I   + G+G   D        P  +  I+      ++  I+P  +  + AH      G  
Sbjct: 2   ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAH------GTS 55

Query: 429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN 488
                  ES    +       + S KS  GH   AAG +  I  I +++H  +P T   +
Sbjct: 56  TPANEKGESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTS 115

Query: 489 ILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
            ++++I+       +  +    +I       A  N+FGF G NA +  
Sbjct: 116 EVSDYIEAN----VVYGQGLEKEI-----PYAISNTFGFGGHNAVLAF 154

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  110 bits (274), Expect = 6e-28
 Identities = 44/229 (19%), Positives = 81/229 (35%), Gaps = 31/229 (13%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + I G+  + P  N  ++FW  L  GR    +I         F+D               
Sbjct: 3   VVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS--------FFDPSPYRSQVAAEADF- 53

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
                   DP+     P E + MD   +  +         +G +P +L  +  GV +G A
Sbjct: 54  --------DPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 105

Query: 237 VSDYNKLI--------------TDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDT 282
           V+    L                D    + +       S++PA V++ +  +GP   + T
Sbjct: 106 VAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVST 165

Query: 283 ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP 331
            C+S L ++ +A  ++  G++ +  AG      TP +          + 
Sbjct: 166 GCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA 214

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  100 bits (248), Expect = 2e-24
 Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 10/214 (4%)

Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
           + I G+    P    +  +W+ +L GR+ +  +  TR+ +  +  +    I         
Sbjct: 2   VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPV--TRFDVSRYPATLAGQIDDFHAPDHI 59

Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
               +   DP            +                   Y+   ++ + CG F    
Sbjct: 60  PGRLLPQTDPSTRL-------ALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTH 112

Query: 237 VSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACD 296
                     PK  + Y       ++   ++S    ++GP  A+    +  L A+ HA  
Sbjct: 113 REFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARR 172

Query: 297 SLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS 330
           ++  G + + ++GGV     P   +    SG +S
Sbjct: 173 TIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIS 205

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.0 bits (225), Expect = 6e-21
 Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 1/206 (0%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
            + +++ +  A            I++TG E  FA G   + +              S+  
Sbjct: 32  CNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWD 91

Query: 646 PLY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
            +   K PVIAA+ G+A+G G  + + CD     E++ +  P +  G  PGAG T    +
Sbjct: 92  HITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTR 151

Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQK 764
             GK L+ E++ T      ++ K+ G+   + P + ++  +++ A+K++  SK  + + K
Sbjct: 152 AVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAK 211

Query: 765 KYYSHSLQKKLSTIFLHELTMHDYTF 790
           +  + + +  L+     E  +   TF
Sbjct: 212 ESVNAAFEMTLTEGNKLEKKLFYSTF 237

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

 Score = 57.4 bits (137), Expect = 1e-09
 Identities = 36/211 (17%), Positives = 80/211 (37%), Gaps = 7/211 (3%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           +  +   +  A   + +    + +++TG    F+ G     L ++ +  +      S  +
Sbjct: 24  SPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSL 83

Query: 646 PLYC------KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699
                       P +AA+ G A+  G  + L CD  +  EE+      ++ GF     S 
Sbjct: 84  MRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALVSV 143

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKE 759
           +   +  G+  ++++L T    + +E K  G+   + P  + L  +  LA++++  +   
Sbjct: 144 I-LVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTS 202

Query: 760 LELQKKYYSHSLQKKLSTIFLHELTMHDYTF 790
           L L K+         L   F      + +  
Sbjct: 203 LRLTKELLLALPGMGLEDGFRLAALANAWVR 233

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.0 bits (110), Expect = 4e-06
 Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 14/136 (10%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGG--------TKEGLLKIQKGISRF 637
           N    + + + F  I+     + ++++G    F  G           +        I+ +
Sbjct: 29  NRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWY 88

Query: 638 TDEKSYCMPLY------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG 691
             +              C  PVIAA+ G  IG G  +   CD    ++++ +Q   +  G
Sbjct: 89  LRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVG 148

Query: 692 FTPGAGSTLIFPQRFG 707
                G+    P+  G
Sbjct: 149 LAADVGTLQRLPKVIG 164

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

 Score = 38.2 bits (87), Expect = 0.003
 Identities = 23/173 (13%), Positives = 57/173 (32%), Gaps = 6/173 (3%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITG-YENYFACGGTKEGLLKIQKGISRFTDEKSYC 644
           N   +  +  A   I +    K +I++   + +       E +   +   +         
Sbjct: 33  NRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEA 92

Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDY-----TIFSEESVYQSPYMRYGFTPGAGST 699
             ++     +      AI      G           + ++ +    P ++ G  PG G T
Sbjct: 93  NKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGT 152

Query: 700 LIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKL 752
           +  P+  G   + E + +  E + ++  +      V+   ++   +L L K+ 
Sbjct: 153 VRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRA 205

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Length = 269

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

 Score = 37.9 bits (86), Expect = 0.004
 Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 8/208 (3%)

Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
           +   ++ +TDA +          ++ITG E+ F  G     +   +         +   +
Sbjct: 28  SVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAAL 87

Query: 646 PLY--------CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG 697
             +         K PV+AA+ G A G G  + L  D  I ++ + +   +   G      
Sbjct: 88  WWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTA 147

Query: 698 STLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSK 757
           ++    +  G   + E++ T      +E K+ G+   V P+ +    + K+A++L+    
Sbjct: 148 TSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPT 207

Query: 758 KELELQKKYYSHSLQKKLSTIFLHELTM 785
               + K+ +     + +      E+  
Sbjct: 208 HLQVMAKERFHAGWMQPVEECTEFEIQN 235

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	829
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	100.0
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	100.0
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	100.0
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	100.0
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	100.0
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	100.0
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	100.0
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	100.0
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	100.0
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ef8a_	261	Methylmalonyl CoA decarboxylase {Escherichia coli	100.0
d1wdka4	310	Fatty oxidation complex alpha subunit, N-terminal	100.0
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	100.0
d2f6qa1	245	Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (	100.0
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	100.0
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	100.0
d1q52a_	297	Naphthoate synthase MenB {Mycobacterium tuberculos	100.0
d1sg4a1	249	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d2a7ka1	230	Carbapenem biosynthes protein CarB {Pectobacterium	100.0
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	100.0
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	100.0
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	100.0
d1pjha_	266	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	100.0
d1szoa_	249	6-oxo camphor hydrolase {Rhodococcus erythropolis	99.98
d2vbaa2	151	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	99.97
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	99.97
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	99.97
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	99.5
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	99.21
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.09
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.07
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.07
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	99.02
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	99.02
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	98.94
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.91
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	98.89
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	98.87
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	98.86
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	98.85
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	98.77
d2af8a_	86	Actinorhodin polyketide synthase acyl carrier prot	98.57
d1or5a_	82	Frenolicin polyketide synthase acyl carrier protei	98.54
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.52
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	98.48
d2pnga1	76	Type I fatty acid synthase ACP domain {Rat (Rattus	98.47
d1nq4a_	95	Oxytetracycline polyketide synthase acyl carrier {	98.37
d1klpa_	115	Acyl carrier protein {Mycobacterium tuberculosis [	98.32
d1f80d_	74	Acyl carrier protein {Bacillus subtilis [TaxId: 14	98.18
d1vkua_	85	Acyl carrier protein {Thermotoga maritima [TaxId:	98.11
d2gdwa1	76	Peptidyl carrier protein (PCP), thioester domain {	98.11
d1dv5a_	80	apo-D-alanyl carrier protein {Lactobacillus casei	97.99
d2jq4a1	83	Hypothetical protein Atu2571 {Agrobacterium tumefa	97.8
d1t8ka_	77	Acyl carrier protein {Escherichia coli [TaxId: 562	97.5
d1y7oa1	192	Clp protease, ClpP subunit {Streptococcus pneumoni	96.75
d2cbya1	179	Clp protease, ClpP subunit {Mycobacterium tubercul	96.73
d1yg6a1	183	Clp protease, ClpP subunit {Escherichia coli [TaxI	96.55
d2f9ya1	316	Acetyl-coenzyme A carboxylase carboxyl transferase	96.31
d2f6ia1	190	Clp protease, ClpP subunit {Plasmodium falciparum	96.24
d1tg6a1	193	Clp protease, ClpP subunit {Human (Homo sapiens),	96.15
d1on3a1	253	Methylmalonyl-CoA carboxyltransferase (transcarbox	95.74
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	95.64
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	95.24
d2a7sa1	258	Propionyl-CoA carboxylase complex B subunit, PccB	95.05
d2f9yb1	263	Acetyl-coenzyme A carboxylase carboxyl transferase	94.93
d1vrga1	251	Propionyl-CoA carboxylase complex B subunit, PccB	94.77
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	94.58
d1pixa2	287	Glutaconyl-CoA decarboxylase A subunit {Acidaminoc	94.33
d1xnya1	258	Propionyl-CoA carboxylase complex B subunit, PccB	94.21
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	92.44
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	91.89
d1uyra1	333	Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc	86.48
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	82.96
d2a7sa2	271	Propionyl-CoA carboxylase complex B subunit, PccB	80.24

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.2e-43  Score=357.22  Aligned_cols=199  Identities=24%  Similarity=0.374  Sum_probs=184.3

Q ss_pred             CCCCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy11396        331 PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINP  410 (829)
Q Consensus       331 ~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~  410 (829)
                      |++.|||||.+++||++|||++++|||++++|+++|++||++|.|++.++|+.+.+...|++..+.++++++|++++++|
T Consensus         3 P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~   82 (205)
T d1tqya2           3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA   82 (205)
T ss_dssp             GGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred             CCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCc
Confidence            67899999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy11396        411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL  490 (829)
Q Consensus       411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~  490 (829)
                      +||+|||+|||||+.+|++|.++|.++|+..   ..+++|+++|+++||+++|||++++++++++|++|+|||++|++++
T Consensus        83 ~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~---~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~  159 (205)
T d1tqya2          83 TDIDYINAHGSGTRQNDRHETAAYKRALGEH---ARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS  159 (205)
T ss_dssp             GGCCEEECCCCCCHHHHHHHHHHHHHHTGGG---GGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB
T ss_pred             cceeeeeccccccccCchhHHHHHHHhhccc---cCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCC
Confidence            9999999999999999999999999999753   2358999999999999999999999999999999999999999999


Q ss_pred             CccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396        491 NEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK  541 (829)
Q Consensus       491 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~  541 (829)
                      ||+++++.    ++.+.++|     ..+++++|||||||+|+|+||+++++
T Consensus       160 ~p~~~~~~----v~~~~~~~-----~~~~a~~~s~GfGG~na~~vl~~~~~  201 (205)
T d1tqya2         160 DPECDLDY----VPLEARER-----KLRSVLTVGSGFGGFQSAMVLRDAET  201 (205)
T ss_dssp             BTTBCSCC----CBSSCEEC-----CCSEEEEEEEETTTEEEEEEEECHHH
T ss_pred             CCCCCccc----CCCCCcCC-----CCCEEEEeCCCCCceeEEEEEeeCCC
Confidence            99998753    44444444     46899999999999999999998764

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.2e-42  Score=343.31  Aligned_cols=192  Identities=24%  Similarity=0.354  Sum_probs=172.5

Q ss_pred             CCCCCCCCCCCCCCcccccceEEEEEccchhhhhCCC-ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy11396        331 PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGD-DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN  409 (829)
Q Consensus       331 ~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~  409 (829)
                      |++.|||||.+++||++|||++++|||++++|+++|+ +||++|.|++.++|+.+.. .  .+.++.++|++||++++++
T Consensus         2 p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~--~~~g~~~~i~~aL~~a~i~   78 (194)
T d1tqyb2           2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-G--RPAGLERAIRLALNDAGTG   78 (194)
T ss_dssp             GGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-C--CCCSHHHHHHHHHHHHTCC
T ss_pred             CCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-c--chhhhhhhhhhhccccccc
Confidence            5678999999999999999999999999999999997 6999999999999986532 2  3345789999999999999


Q ss_pred             CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCC
Q psy11396        410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI  489 (829)
Q Consensus       410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~  489 (829)
                      |+||+|||+|||||+.+|.+|.++|.++|+.     ..++|+++|+++||+++|||++++++++++|++|+|||++|+++
T Consensus        79 ~~di~~v~ahgtGt~~~D~~E~~al~~~f~~-----~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~  153 (194)
T d1tqyb2          79 PEDVDVVFADGAGVPELDAAEARAIGRVFGR-----EGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTS  153 (194)
T ss_dssp             GGGCCEEECCCCCSHHHHHHHHHHHHHHHCT-----TCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCC
T ss_pred             ccceeeeeccccCcccccHHHhhhhhhhhhc-----cccccccccccccccccccccceehhhhhhhhhceeccccCCCC
Confidence            9999999999999999999999999999973     34889999999999999999999999999999999999999999


Q ss_pred             CCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       490 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                      |+|+++++    ++.+++++|     .+++++||||||||+|+|+||++|
T Consensus       154 ~~~~~~~~----~v~~~~~~~-----~~~~a~v~s~GfgG~na~~vl~~~  194 (194)
T d1tqyb2         154 VPREYGID----LVLGEPRST-----APRTALVLARGRWGFNSAAVLRRF  194 (194)
T ss_dssp             CCGGGCCE----ECBSSCBCC-----CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             CCcccCcc----ccCCCCccC-----CCCEEEEECcCCCceeEEEEEeeC
Confidence            99988753    345554443     578999999999999999999986

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.8e-41  Score=349.72  Aligned_cols=237  Identities=24%  Similarity=0.384  Sum_probs=208.0

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      +++|||||||+++|+|.++++||++|.+|++++++++  ||+...|.           .+..+.+++   |++.. .+++
T Consensus         1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~~-----------~~~~~~v~~---~~~~~-~~~~   63 (250)
T d2gfva1           1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID--HFDTSAYA-----------TKFAGLVKD---FNCED-IISR   63 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTCS-----------CCEEECCTT---CCCTT-TSCH
T ss_pred             CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCC--cccccccC-----------Cccceeccc---chhhh-hhhh
Confidence            4789999999999999999999999999999999986  56544432           233444444   44433 3789


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhh
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPA  265 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~  265 (829)
                      ++.+.|||++++++.++++||+|||+...+++..++||++|++.+.+....        ..+..+.++.+++.+++.+++
T Consensus        64 ~~~~~~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  143 (250)
T d2gfva1          64 KEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAG  143 (250)
T ss_dssp             HHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred             HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHH
Confidence            999999999999999999999999999999999999999999876542221        235567788888999999999


Q ss_pred             HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCCCCCCC
Q psy11396        266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHCYSFDQ  340 (829)
Q Consensus       266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~~pfd~  340 (829)
                      +|++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|...+|..+..|..++.++..     +.|||||.
T Consensus       144 ~ia~~~gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~  223 (250)
T d2gfva1         144 HLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDK  223 (250)
T ss_dssp             HHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBT
T ss_pred             HHHHHhCCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999853     45999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGD  367 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~  367 (829)
                      +++|+++|||++++|||++++|++||+
T Consensus       224 ~rdG~v~gEGaa~lVLE~~~~A~~rGA  250 (250)
T d2gfva1         224 ERDGFVLGDGAGMLVLEEYEHAKKRGA  250 (250)
T ss_dssp             TCCSBCBBCEEEEEEEEEHHHHHHHTC
T ss_pred             CCCCEeeeeEEEEEEECcHHHHHHCcC
Confidence            999999999999999999999999985

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.6e-41  Score=351.56  Aligned_cols=235  Identities=24%  Similarity=0.355  Sum_probs=205.6

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|.|.+.++||++|.+|++++.+++  ||+...++.           ...+..    .+++..+ ++++
T Consensus         2 ~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~--~~~~~~~~~-----------~~~~~~----~~~~~~~-~~~~   63 (249)
T d1j3na1           2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDASALPV-----------RIAAEV----DVDPGAY-LDRK   63 (249)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSCCTTSSC-----------CEEECC----CCCGGGT-SCHH
T ss_pred             CcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCC--ccccccCCc-----------cccccc----ccccccc-ccHH
Confidence            579999999999999999999999999999999886  565444321           111111    1333333 7899


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR  266 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~  266 (829)
                      +.+.|||++++++.++++||+|||++++++++.++|||+|++.+++....        ..+..+.++.+.+...+.++++
T Consensus        64 ~~~~~d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (249)
T d1j3na1          64 ELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAH  143 (249)
T ss_dssp             HHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred             HHhhCCHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhh
Confidence            99999999999999999999999999999999999999999877653322        2456778888999999999999


Q ss_pred             hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCCC
Q psy11396        267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQR  341 (829)
Q Consensus       267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~~  341 (829)
                      |++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|....|..+..|...+.++.     ++.|+|||.+
T Consensus       144 is~~~gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~  223 (249)
T d1j3na1         144 IAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS  223 (249)
T ss_dssp             HHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred             hHhhcCCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999985     4569999999


Q ss_pred             CCCcccccceEEEEEccchhhhhCCC
Q psy11396        342 ANGFVPGEGVGVLMLKKLKDAKKDGD  367 (829)
Q Consensus       342 ~~G~~~gEGaaalvL~~~~~A~~~g~  367 (829)
                      ++|+++||||+++|||++++|++||+
T Consensus       224 ~dG~v~gEGa~~lvLe~~~~A~~rGA  249 (249)
T d1j3na1         224 RDGFVMGEGAGVLVLEAYEHAKKRGA  249 (249)
T ss_dssp             CCCBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred             CCCEeeEeEEEEEEEccHHHHHHCcC
Confidence            99999999999999999999999985

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=6e-40  Score=342.69  Aligned_cols=237  Identities=24%  Similarity=0.350  Sum_probs=207.2

Q ss_pred             CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396        114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP  193 (829)
Q Consensus       114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p  193 (829)
                      +++|||||||+++|+|.++++||++|.+|+++++++|  ||+...++           ....+.++.    +...+.+++
T Consensus         1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~--~~~~~~~~-----------~~~~g~~~~----~~~~~~~~~   63 (250)
T d1e5ma1           1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT--RFDASDQA-----------CRFGGEVKD----FDATQFLDR   63 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECC--SSCCTTSS-----------CCEEECCCS----CCGGGTSCH
T ss_pred             CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCC--cccccccc-----------ccccceeee----cccccccch
Confidence            4799999999999999999999999999999999886  66544332           222333332    233456899


Q ss_pred             HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhh
Q psy11396        194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPA  265 (829)
Q Consensus       194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~  265 (829)
                      ++.+.|||+++++++++++||+|||+.+..+...++++++|++.+......        ..+....++.+.....+.+++
T Consensus        64 ~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  143 (250)
T d1e5ma1          64 KEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASG  143 (250)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred             hhhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhh
Confidence            999999999999999999999999999999999999999998876543322        235566777888888999999


Q ss_pred             HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCC
Q psy11396        266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQ  340 (829)
Q Consensus       266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~  340 (829)
                      ++++.||++||+++|+++|+||+.||++|+++|++|+||++||||+|...+|..+..|...+.++.     ++.|+|||.
T Consensus       144 ~is~~~gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~  223 (250)
T d1e5ma1         144 LTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDK  223 (250)
T ss_dssp             HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBT
T ss_pred             hHHHhccCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999984     457999999


Q ss_pred             CCCCcccccceEEEEEccchhhhhCCC
Q psy11396        341 RANGFVPGEGVGVLMLKKLKDAKKDGD  367 (829)
Q Consensus       341 ~~~G~~~gEGaaalvL~~~~~A~~~g~  367 (829)
                      +++|+++|||++++|||++++|++||+
T Consensus       224 ~~dG~~~gEGa~~~vLe~l~~A~~rGA  250 (250)
T d1e5ma1         224 DRDGFVMGEGSGILILEELESALARGA  250 (250)
T ss_dssp             TCCSBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred             CCCCEeeEeeEEEEEEeeHHHHHHCcC
Confidence            999999999999999999999999985

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.8e-40  Score=347.21  Aligned_cols=226  Identities=20%  Similarity=0.288  Sum_probs=206.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEeccc
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQGH  660 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G~  660 (829)
                      .|++|.+|+++|.++++.+++|+++++|||+|.|++||+|+|++++......... ......+..+..+||||||+|||+
T Consensus        28 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G~  107 (260)
T d1mj3a_          28 LNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGY  107 (260)
T ss_dssp             TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCcceEEEecccccccccchhhhhhccchhhhhHHHHHHHHHHhccCCCeEEEEEcCe
Confidence            5889999999999999999999999999999999999999999887643222111 112233455666999999999999


Q ss_pred             ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396        661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ  740 (829)
Q Consensus       661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~  740 (829)
                      |+|||++|+++|||||++++++|++||+++|++|+++++++|++++|++++++++++|++|+++||+++|||++|++.++
T Consensus       108 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~  187 (260)
T d1mj3a_         108 ALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVET  187 (260)
T ss_dssp             EETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTT
T ss_pred             EeHHHHHHHHHCCEEEEcCCCEEECchhccCcCCcccHHHHHHHHhCHHHHHHHHHcCcccCchhhccCCCceeeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      +.+.+.+++++++..++.+++.+|++++..+...+++.+..|...+...+ .+++++|++++|++||.
T Consensus       188 ~~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~~~~~-~s~d~~egi~aFleKR~  254 (260)
T d1mj3a_         188 LVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTF-ATDDRREGMSAFVEKRK  254 (260)
T ss_dssp             HHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGG-GSHHHHHHHHHHHTTSC
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999 79999999999999863

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.6e-40  Score=344.62  Aligned_cols=224  Identities=18%  Similarity=0.291  Sum_probs=200.8

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-----ccccccccccCCCCEEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-----DEKSYCMPLYCKIPVIAA  656 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~~kp~Iaa  656 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++...........     ....+..+..+||||||+
T Consensus        30 ~Nal~~~m~~el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa~  109 (263)
T d1wz8a1          30 LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAA  109 (263)
T ss_dssp             GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhhcccccccccchhhhhHHHHHhhhhhcceeee
Confidence            578899999999999999999999999999999999999999998764322211111     112234455599999999


Q ss_pred             ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      |||+|+|||++|+++|||||++++++|++||+++|++|++++++++++++|..++++++++|++|+++||++|||||+|+
T Consensus       110 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~~G~~~a~~l~l~g~~i~a~eA~~~Glv~~vv  189 (263)
T d1wz8a1         110 VEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAV  189 (263)
T ss_dssp             ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHHHHHHTSSSEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccchhHHHhcCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      |.+++.+++.+++++|+..||.+++.+|+++++...... +.++.|...+...+ .+++.+|++++|+|||
T Consensus       190 ~~~~l~~~a~~~a~~la~~~~~al~~~K~~l~~~~~~~~-~~~~~e~~~~~~~~-~s~d~~Egi~Af~eKR  258 (263)
T d1wz8a1         190 EDEKVYEKALEVAERLAQGPKEALHHTKHALNHWYRSFL-PHFELSLALEFLGF-SGKELEEGLKALKEKR  258 (263)
T ss_dssp             CGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHGG-GSHHHHHHHHHHHTTS
T ss_pred             chhhhhHHHHHHHHHhhccHHHHHHHHHHHHHHHHhChH-HHHHHHHHHHHHHc-cCHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999998876555 45788888888888 7899999999999987

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-40  Score=344.03  Aligned_cols=225  Identities=20%  Similarity=0.316  Sum_probs=203.7

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-------cccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-------TDEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-------~~~~~~~~~~~~~kp~  653 (829)
                      +.|++|.+|+.+|.+++..++.| ++++|||+|.|+.||+|+|+.++..........       .....+..+..+||||
T Consensus        23 ~~Nals~~~~~el~~al~~~~~d-~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~  101 (258)
T d2fw2a1          23 EKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPI  101 (258)
T ss_dssp             STTCBCHHHHHHHHHHHHHHHHS-SCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHcC-CCEEEEEecCccccccccccchhhhcccccccchhhHHHHHHHHHHHhhhccceee
Confidence            46899999999999999999887 569999999999999999999876433221110       0112233455599999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++++++|||||++++++|++||+++|++|+++++++|++++|..++++++++|++|+++||+++||||
T Consensus       102 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~eA~~~Glv~  181 (258)
T d2fw2a1         102 VVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVS  181 (258)
T ss_dssp             EEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSCS
T ss_pred             eeecccccccccccccccccccceecccceeeccccccccccccccccchhhcCccccchhhccCccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|||++++.+++.+++++|++.++.+++.+|++++......+++.++.|...+..++ .+++.+|+|++|+|||
T Consensus       182 ~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~Egi~af~EKR  254 (258)
T d2fw2a1         182 QVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIW-SSAQGIESMLKYVENK  254 (258)
T ss_dssp             EEECSTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHHSS
T ss_pred             ccccccccccccchhhhhhhhhhHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999888889999999999999999 7999999999999986

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=100.00  E-value=4e-39  Score=339.56  Aligned_cols=230  Identities=17%  Similarity=0.249  Sum_probs=206.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc---ccc-----cccccccccccCCCC
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI---SRF-----TDEKSYCMPLYCKIP  652 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~kp  652 (829)
                      ..|++|.+|+.+|.++++.+++|+++++|||+|.|+.||+|+|+.++.......   ...     ........+..+|||
T Consensus        23 ~~Nal~~~~~~el~~~l~~~~~d~~i~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP  102 (269)
T d1nzya_          23 HRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRP  102 (269)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCcccccchhhHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhcch
Confidence            458999999999999999999999999999999999999999998874211110   000     011223345559999


Q ss_pred             EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396        653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS  732 (829)
Q Consensus       653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv  732 (829)
                      +||+|||+|+|||++|+++|||||++++++|++||.++|+.|++++++++++++|..++++++++|+.|+|+||+++|||
T Consensus       103 vIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~~~~~g~~~~~g~~~~l~~~ig~~~a~~l~ltg~~i~a~eA~~~Glv  182 (269)
T d1nzya_         103 VLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLV  182 (269)
T ss_dssp             EEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHTSC
T ss_pred             hehhhhhhcCCCceeeeecccHhhhhhhhhhcccccccccccccccccccccccChhhhhhccccccccchhHHHHcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccC
Q psy11396        733 MPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKN  811 (829)
Q Consensus       733 ~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~  811 (829)
                      |+|+|++++++++.+++++|++.|+.+++.+|+.+++.+...++++++.|...+...+ .+++++|+|++|+||++.+.
T Consensus       183 ~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~e~v~aflekrkp~~  260 (269)
T d1nzya_         183 SRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASV-THPHFMPCLTRFLDGHRADR  260 (269)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH-HSTTHHHHHHHHHTTCCTTC
T ss_pred             cccccccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999 78999999999999875443

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-38  Score=331.13  Aligned_cols=224  Identities=17%  Similarity=0.262  Sum_probs=202.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccc------cccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTD------EKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.+++|+++++|||+|.|+.||+|+|+..+............      ......+..+||||||
T Consensus        20 ~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa   99 (253)
T d1uiya_          20 RNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVA   99 (253)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhccccCcccccchhhhhhhhhhHHhcCCCCEEE
Confidence            5889999999999999999999999999999999999999999887644322211110      1122334459999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||.++|++|. +++++|++++|+.++++++++|++|+++||+++||||+|
T Consensus       100 av~G~a~GgG~~lal~~D~ria~~~a~~~~~e~~~g~~~~-~~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v  178 (253)
T d1uiya_         100 AVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRI  178 (253)
T ss_dssp             EECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCH-HHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSCSEE
T ss_pred             EeCeEEehhhHHHHhhhhhhhhhhhhHHhhhhcccccccc-cchhhhhcccCHHHHHHHhhcCcCCCHHHHHHhCCCccc
Confidence            9999999999999999999999999999999999998875 567889999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      +|.+++.+.+.++++++...++.+++.+|++++......+++.+..|...+...+ .+++++|++++|+|||
T Consensus       179 ~~~~~~~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~-~s~d~~egi~af~eKR  249 (253)
T d1uiya_         179 APPGKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVR-ETGDLAEGIRAFFEKR  249 (253)
T ss_dssp             ECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGG-GCHHHHHHHHHHHTTS
T ss_pred             ccccccchhHHHHHHhhcccchHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999999999999999999988 7899999999999986

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.9e-38  Score=330.70  Aligned_cols=237  Identities=19%  Similarity=0.283  Sum_probs=207.8

Q ss_pred             eEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc
Q psy11396        557 MVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR  636 (829)
Q Consensus       557 ~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~  636 (829)
                      ++..++-++|+.             .|++|.+|+.+|.++++.+++|+++++|||+|.|+.||+|+|+.++.........
T Consensus        13 ~I~~itlnrP~~-------------~Nals~~m~~el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~~   79 (275)
T d1dcia_          13 HVLHVQLNRPEK-------------RNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPG   79 (275)
T ss_dssp             TEEEEEECCGGG-------------TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCC
T ss_pred             CEEEEEEcCCCC-------------CCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhccccccc
Confidence            355566566654             4889999999999999999999999999999999999999999887654333211


Q ss_pred             ccc--------------cccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceecc
Q psy11396        637 FTD--------------EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF  702 (829)
Q Consensus       637 ~~~--------------~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l  702 (829)
                      ...              ...+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++++++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~~~~~~~  159 (275)
T d1dcia_          80 DDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRL  159 (275)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHG
T ss_pred             ccccchhhhhccchhhhHHHHHHHHhcCCCEEEEEeeEeehhhHHHHhhcCchhhccCccccchhccccccccccccccc
Confidence            111              112233455999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCHH-HHHHHHhcCCccCHHHHHHcCCcccccChh-hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHH
Q psy11396        703 PQRFGKI-LSREILFTASEFKGKELKERGISMPVLPRK-QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFL  780 (829)
Q Consensus       703 ~r~iG~~-~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~-~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~  780 (829)
                      ++++|.. .+++++++|+.++++||+++||||+|+|.+ ++.+.+.+++++|++.+|.+++.+|+.++......++++++
T Consensus       160 ~~~~g~~~~~~~ll~~g~~~~a~eA~~~Glv~~v~~~~~~l~~~~~~~a~~i~~~~p~a~~~~K~~l~~~~~~~l~~~~~  239 (275)
T d1dcia_         160 PKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLD  239 (275)
T ss_dssp             GGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             ccccccccccccccccccccchhhhccCCCceeeeehhhhhhhcccccccccccccHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            9999955 567899999999999999999999999865 57788899999999999999999999999999889999999


Q ss_pred             HHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396        781 HELTMHDYTFVNNPSVITNIERYFDKS  807 (829)
Q Consensus       781 ~e~~~~~~~~~~~~~~~e~~~~~~~k~  807 (829)
                      .|...+..++ .+++++|+|++|+|||
T Consensus       240 ~e~~~~~~~~-~~~d~~Egi~AfleKR  265 (275)
T d1dcia_         240 YMATWNMSML-QTQDIIKSVQAAMEKK  265 (275)
T ss_dssp             HHHHHHHHHT-SSHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHh-CCHHHHHHHHHHhCCC
Confidence            9999999999 7999999999999986

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-38  Score=332.31  Aligned_cols=226  Identities=21%  Similarity=0.285  Sum_probs=200.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccc---ccccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISR---FTDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|.|+..+.........   ......+..+..+||||||+|
T Consensus        27 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav  106 (266)
T d1hzda_          27 KNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAI  106 (266)
T ss_dssp             TTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccccccccccccccccccccchhhhhhhhHHHHHHHHHhcCCccccccc
Confidence            5889999999999999999999999999999997 589999998877543221111   011223344556999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|+.|+++||+++||||+|||
T Consensus       107 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~  186 (266)
T d1hzda_         107 DGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE  186 (266)
T ss_dssp             SEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEEC
T ss_pred             ccccccccceeccccceeeecCCcEEeecccceeecCCccceeeehhhhHHHHHHhhhccCCccCHHHhhcccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQV----LFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l----~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++    .+.+.+++++|+..+|.+++.+|++++.....++++.+..|...+...+ .+++.+|++++|+|||.
T Consensus       187 ~~~l~~~~~~~a~~~a~~i~~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~-~s~d~~Eg~~AF~eKR~  260 (266)
T d1hzda_         187 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTI-PTKDRLEGLLAFKEKRP  260 (266)
T ss_dssp             CCTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTT-TCHHHHHHHHHHTTTSC
T ss_pred             hhhhhhHHHHHHHHHHHhcccCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhCCCC
Confidence            8764    5566667788889999999999999999999999999999999999998 79999999999999874

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-37  Score=326.88  Aligned_cols=225  Identities=16%  Similarity=0.193  Sum_probs=193.0

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCC--CCeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGY--ENYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~--g~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++++++ +++++|||+|.  |++||+|+|++++.........+.  ....+..+..+||||||+|
T Consensus        25 ~Nal~~~~~~~l~~al~~~~~-~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav  103 (261)
T d1ef8a_          25 LNALSKVFIDDLMQALSDLNR-PEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMV  103 (261)
T ss_dssp             TTCCCHHHHHHHHHHHHHTCS-TTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeccccchhhcccccccccccCCccccccccchhhhHHHHHhCchhhhhcc
Confidence            589999999999999999985 57899999986  689999999998765333222111  1223344445999999999


Q ss_pred             cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ||+|+|||++|+++||+||++++++|++||.++|++|++++++++++.+|..++++++++|+.|+++||+++||||+|+|
T Consensus       104 ~G~a~GgG~~lal~cD~ria~~~a~~~~pe~~~Gl~~~~~~~~~l~r~~g~~~a~~~~l~g~~~~a~eA~~~Glv~~vv~  183 (261)
T d1ef8a_         104 EGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVE  183 (261)
T ss_dssp             CSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEEC
T ss_pred             cccccchhhhhhhhhhhhhhhHhHHHhhhhcccccccccccccccccccCccccccccccCceEcHHHHHHcCCcceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKL--STIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      ++++.+++.+++++|+..+|.+++.+|+.++.......  ...++.+...+...+ .++|.+|+|++|+|||.
T Consensus       184 ~~~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~s~D~~Egi~AfleKR~  255 (261)
T d1ef8a_         184 VEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVY-DSEDYQEGMNAFLEKRK  255 (261)
T ss_dssp             HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             chhhhhhhHHHHHHHHhcCcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHh-CCHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999998765443  444555566666777 78999999999999873

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.6e-37  Score=329.29  Aligned_cols=230  Identities=16%  Similarity=0.163  Sum_probs=198.7

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc------cccccccccccCCCCEEE
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF------TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~------~~~~~~~~~~~~~kp~Ia  655 (829)
                      .|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++..........      .....+..+..+||||||
T Consensus        29 ~Nal~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa  108 (310)
T d1wdka4          29 VNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVA  108 (310)
T ss_dssp             SCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhcccccchhhhhhhhHHHHHHHHhhcCCcccee
Confidence            58899999999999999999999999999999999999999999886543322110      011233445569999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++||+++||||+|
T Consensus       109 av~G~a~GgG~elal~cD~ria~~~a~f~~pe~~~Gl~P~~gg~~~L~r~iG~~~a~~lll~g~~~~a~eA~~~Glv~~v  188 (310)
T d1wdka4         109 AINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAV  188 (310)
T ss_dssp             EECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSEE
T ss_pred             eccccccccccccchhhhhhhccccceecccccccCCCccccchhhhhhhhhhhhhhhhhccccccCHHHHhhccCccEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHH---------------------------------------HHHHHHHHHHhhhhCCHH
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKK---------------------------------------ELELQKKYYSHSLQKKLS  776 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~---------------------------------------a~~~~K~~l~~~~~~~~~  776 (829)
                      +|++++.+.+.+++++++..+..                                       +.....+.+......+++
T Consensus       189 v~~~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pA~~~~l~~v~~~~~~~~~  268 (310)
T d1wdka4         189 VTADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRD  268 (310)
T ss_dssp             ECGGGHHHHHHHHHHHHHTTSSCHHHHHGGGGSCCSCCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHhcccchhhhhhhhcccccccchhhhHHHHHhhhhhhhhccCCChHHHHHHHHHHHHhCCCHH
Confidence            99999999999999999876432                                       112233455666667899


Q ss_pred             HHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccCC
Q psy11396        777 TIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNN  812 (829)
Q Consensus       777 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~~  812 (829)
                      +++..|.+.|.+++ .+++.++.|.+|++||.-++.
T Consensus       269 ~~L~~E~~~f~~l~-~t~~a~~~i~aF~~kr~~~k~  303 (310)
T d1wdka4         269 KALEVEAAGFAKLA-KTSASNCLIGLFLNDQELKKK  303 (310)
T ss_dssp             HHHHHHHHHHHHHH-TSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-CCHHHHHHHHHHHhhhhhcCC
Confidence            99999999999999 799999999999998865443

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=100.00  E-value=1.4e-36  Score=320.44  Aligned_cols=251  Identities=21%  Similarity=0.276  Sum_probs=199.2

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccc-cCcceeecccccCcc---cccCCcCCC
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNA-IGKTICKKMGSLEDI---EIFDPLFFN  190 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~fd~~~f~  190 (829)
                      ++|||||||+++|+|.++++||++|.+|+++|+++|..||....|+...... ......+..++++..   ..||...+ 
T Consensus         1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (270)
T d2ix4a1           1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALW-   79 (270)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHH-
T ss_pred             CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHh-
Confidence            5799999999999999999999999999999999999999877765432211 112223334444321   22333222 


Q ss_pred             CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCC-CCCceEEEEccccccc--------cccccCccccchhhhcccccc
Q psy11396        191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSL-SGSLCGVFVGCAVSDY--------NKLITDPKMYNAYALMGESVS  261 (829)
Q Consensus       191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-~~~~~Gv~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  261 (829)
                         .....+++....+..+..+|+++++...... ...++++..+......        ...........++.+++...+
T Consensus        80 ---~~~~~~~~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (270)
T d2ix4a1          80 ---LNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN  156 (270)
T ss_dssp             ---SCSTTCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred             ---hhhhhhhhhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccc
Confidence               2344567777888889999999998754332 2334555555443321        111234566788888999999


Q ss_pred             chhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC------CCCC
Q psy11396        262 ILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP------DGHC  335 (829)
Q Consensus       262 ~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~------~~~~  335 (829)
                      .++++|++.||++||+++|+++|+||+.||++|+++|++|+||++||||++....|..+..|...++++.      ++.|
T Consensus       157 ~~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~  236 (270)
T d2ix4a1         157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS  236 (270)
T ss_dssp             HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred             hhHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999874      4579


Q ss_pred             CCCCCCCCCcccccceEEEEEccchhhhhCCCce
Q psy11396        336 YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDI  369 (829)
Q Consensus       336 ~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i  369 (829)
                      +|||.+++|+++|||++++|||++++|++||++|
T Consensus       237 rPFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I  270 (270)
T d2ix4a1         237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI  270 (270)
T ss_dssp             CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred             CCCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence            9999999999999999999999999999999986

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-37  Score=318.53  Aligned_cols=215  Identities=17%  Similarity=0.249  Sum_probs=189.4

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-------ccccccccccCCCCE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-------DEKSYCMPLYCKIPV  653 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~~kp~  653 (829)
                      ..|++|.+|+.+|.++++++++|+.+ +||++|.|++||+|+|+.++...........       ....+..+..+||||
T Consensus        23 ~~Nals~~~~~~l~~~l~~~~~d~~v-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpv  101 (245)
T d2f6qa1          23 KKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPL  101 (245)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCE
T ss_pred             cCCCCCHHHHHHHHHHHHHHhcCCce-EEeecCCCccccCCccchhhhcccccccccccchhhhHHHHHHhhhhhcCCce
Confidence            47999999999999999999999876 8999999999999999988764322211111       012233455699999


Q ss_pred             EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396        654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM  733 (829)
Q Consensus       654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~  733 (829)
                      ||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++||+++||||
T Consensus       102 Ia~v~G~a~GgG~~la~~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~  181 (245)
T d2f6qa1         102 IAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVT  181 (245)
T ss_dssp             EEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCS
T ss_pred             EEEECCccccccccchhhhhhhhhhccCeEecccccCCCCccccchhhcccccccchhhhhccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHH
Q psy11396        734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVI  797 (829)
Q Consensus       734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  797 (829)
                      +|+|++++++++.+++++|++.||.+++.+|++++......+++.+..|...+..+| .++|.+
T Consensus       182 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~  244 (245)
T d2f6qa1         182 EVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRW-LSDECT  244 (245)
T ss_dssp             EEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHH-TSHHHH
T ss_pred             ccCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHh-cCcccC
Confidence            999999999999999999999999999999999999888888999999999999999 677764

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-35  Score=310.79  Aligned_cols=236  Identities=21%  Similarity=0.299  Sum_probs=194.0

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|+|.++++||++|.+|++++++++.  |....+..           ...+   .+. +++..+ ++..
T Consensus         2 ~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~--~~~~~~~~-----------~~~~---~~~-~~~~~~-~~~~   63 (253)
T d2vbaa1           2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQE--LKDSGMRS-----------HVWG---NVK-LDTTGL-IDRK   63 (253)
T ss_dssp             CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHH--HHHTTCSC-----------CEEE---CCC-CCCTTS-SCHH
T ss_pred             CcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCc--cccccCcc-----------cccc---ccc-cccccc-ccch
Confidence            5899999999999999999999999999999998863  32222211           1111   111 222222 6888


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCC-CCCCceEEEEcccccccccc---------ccCccccchhhhccccccchh
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNKL---------ITDPKMYNAYALMGESVSILP  264 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~-i~~~~~Gv~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~a  264 (829)
                      +.+.+++..++.+.++.+|++++|+.... .+..++|+++|+..+.....         ......+.++.+++...+.++
T Consensus        64 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  143 (253)
T d2vbaa1          64 VVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVS  143 (253)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHH
T ss_pred             hhccchhhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhcccccccc
Confidence            99999999999999999999999997544 34678999999876543211         123455677888888999999


Q ss_pred             hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCC
Q psy11396        265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSF  338 (829)
Q Consensus       265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pf  338 (829)
                      ++|++.||++||+++|+++|+||+.||++|+++|++|+||++||||+|.+..+ ....+..++.++      |++.|+||
T Consensus       144 ~~is~~~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~-~~~~~~~~~~ls~~~~~~P~~~~rPF  222 (253)
T d2vbaa1         144 ACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MACEFDAMGALSTKYNDTPEKASRTY  222 (253)
T ss_dssp             HHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HHHHHHHTTCBCCSCTTSGGGSCCTT
T ss_pred             ceeccccCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcc-hhhhHHHHHHHhcCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999986544 566788888776      36789999


Q ss_pred             CCCCCCcccccceEEEEEccchhhhhCCCce
Q psy11396        339 DQRANGFVPGEGVGVLMLKKLKDAKKDGDDI  369 (829)
Q Consensus       339 d~~~~G~~~gEGaaalvL~~~~~A~~~g~~i  369 (829)
                      |.+++|+++|||++++|||++++|++||++|
T Consensus       223 D~~~~G~v~gEGa~~lvLe~le~A~~rGa~I  253 (253)
T d2vbaa1         223 DAHRDGFVIAGGGGMVVVEELEHALARGAHI  253 (253)
T ss_dssp             BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred             CCCCCCEeeeeEEEEEEEccHHHHHHccCcC
Confidence            9999999999999999999999999999986

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=2.6e-36  Score=291.21  Aligned_cols=160  Identities=24%  Similarity=0.370  Sum_probs=147.6

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF  447 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~  447 (829)
                      +|||+|+|+++++|+.+.+.+.|++.++.++|++||++|+++|+||+|||+|||||+++|.+|..+|.++|+..   ..+
T Consensus         1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~---~~~   77 (161)
T d1e5ma2           1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNH---AYN   77 (161)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGG---GGG
T ss_pred             CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccC---CCc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999853   345


Q ss_pred             cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCC
Q psy11396        448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGF  527 (829)
Q Consensus       448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~  527 (829)
                      ++|+++|+++||+++|||++++++++++|++++|||++|+++|||.+++..    ++.+.++|     ..+++++|||||
T Consensus        78 ~~v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~a~~nsfGf  148 (161)
T d1e5ma2          78 IAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDY----VPGQSRAL-----IVDVALSNSFGF  148 (161)
T ss_dssp             SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCC----CBSSCEEC-----CCSEEEEEEEET
T ss_pred             ceEEecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCccc----CcCcccCC-----CCCEEEEeCcCc
Confidence            899999999999999999999999999999999999999999999987653    34455555     468999999999


Q ss_pred             CCceEEEEeeec
Q psy11396        528 SGTNAHIVLMEK  539 (829)
Q Consensus       528 gG~na~~vl~e~  539 (829)
                      ||+|+|+||++|
T Consensus       149 GG~Na~lvl~~y  160 (161)
T d1e5ma2         149 GGHNVTLAFKKY  160 (161)
T ss_dssp             TTEEEEEEEECC
T ss_pred             CcEeEEEEEeee
Confidence            999999999997

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-35  Score=316.02  Aligned_cols=236  Identities=15%  Similarity=0.192  Sum_probs=191.8

Q ss_pred             EEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCC-------CCeeeccCChhhhhhh
Q psy11396        558 VFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-------ENYFACGGTKEGLLKI  630 (829)
Q Consensus       558 ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-------g~~F~~G~D~~~~~~~  630 (829)
                      +..|+-++|+.             .|++|.+|+.+|.++++++++|+++|+|||+|.       |+.||+|.|+......
T Consensus        30 i~~ItlnRP~~-------------~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag~Dl~~~~~~   96 (297)
T d1q52a_          30 TVRVAFNRPEV-------------RNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS   96 (297)
T ss_dssp             EEEEEECCGGG-------------TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC--------
T ss_pred             EEEEEECCCCc-------------CCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhcchhhhhccc
Confidence            45566566654             578899999999999999999999999999997       4567777777654322


Q ss_pred             hccccc-------cc-------ccccccccccCCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCC
Q psy11396        631 QKGISR-------FT-------DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPG  695 (829)
Q Consensus       631 ~~~~~~-------~~-------~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~  695 (829)
                      ......       ..       .......+..+||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~~ia~~~~~~f~~pe~~~Gl~p~  176 (297)
T d1q52a_          97 GYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDG  176 (297)
T ss_dssp             ---------------------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCCCC
T ss_pred             ccccccccccchhhhHHHHHHHHHHHHHHHHhcCCeEEEEEcceeeeccchhhhhhhccccccccccceeeeeccccccc
Confidence            111000       00       011222334499999999999999999999999999999876 579999999999999


Q ss_pred             CcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCH
Q psy11396        696 AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKL  775 (829)
Q Consensus       696 ~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~  775 (829)
                      ++++++|+|++|.+++++++++|+.|+++||+++||||+|+|.+++++++.++++++++.+|.+++.+|++++... ..+
T Consensus       177 ~~~~~~L~r~iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~el~~~~~~~a~~l~~~~~~a~~~~K~~~~~~~-~~~  255 (297)
T d1q52a_         177 GYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLD-DGL  255 (297)
T ss_dssp             STTTHHHHHHHCHHHHHHHHHHCCEECHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTT-THH
T ss_pred             cccccccccccCccceeeccccccccchHhhhhhccccccCchHHhhHHHHHHhhhhccCCHHHHHHHHHHHHHhh-cCh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999998753 445


Q ss_pred             HHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396        776 STIFLHELTMHDYTFVNNPSVITNIERYFDKSI  808 (829)
Q Consensus       776 ~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~  808 (829)
                      .+....+...+...+ .+++++|++++|+|||.
T Consensus       256 ~~~~~~~~~~~~~~~-~s~d~~Egv~AF~eKR~  287 (297)
T d1q52a_         256 VGQQLFAGEATRLAY-MTDEAVEGRDAFLQKRP  287 (297)
T ss_dssp             HHHHHHHHHHHHHHH-TSHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHh-cCHHHHHHHHHHhCCCC
Confidence            555566677777777 78999999999999873

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=315.17  Aligned_cols=219  Identities=14%  Similarity=0.161  Sum_probs=193.1

Q ss_pred             cCCcccccccccccchhhhcccccceeeeeeCCCC-eeeccCChhhhhhhhccccc---ccccccccccccCCCCEEEEe
Q psy11396        582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYEN-YFACGGTKEGLLKIQKGISR---FTDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~-~F~~G~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~kp~Iaav  657 (829)
                      .|++|.+|+.+|.++++.++.|+++++|||+|.|+ +||+|+|++++.........   ......+..+..+||||||+|
T Consensus        24 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIa~v  103 (249)
T d1sg4a1          24 VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAI  103 (249)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEecccccccccccccccccccchhhHHHHHhhhcCccccchhh
Confidence            37789999999999999999999999999999975 79999999887532211100   001122344556999999999


Q ss_pred             cccccchhhhhhhcccccccccccee--ccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVY--QSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f--~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      ||+|+|||++|+++|||||++++++|  ++||+++|++|+++++++|++++|+.++++++++|++|+++||+++||||+|
T Consensus       104 ~G~a~GgG~~lal~~D~~ia~~~a~f~~~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~~A~~~Glv~~v  183 (249)
T d1sg4a1         104 NGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQV  183 (249)
T ss_dssp             CEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCHHHHHHHTSSSEE
T ss_pred             cccccccccccccccccceeeccccccccccccccccccccccccccccccccccccccccccccccHHHHHhhcccccc
Confidence            99999999999999999999999876  7899999999999999999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHH
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIE  801 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~  801 (829)
                      +|++++++++.++++++++.++.+++.+|+++++.....+.+.++.|...+...+ .+++++++|+
T Consensus       184 ~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~-~~e~~~~~le  248 (249)
T d1sg4a1         184 VPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFI-SKDSIQKSLQ  248 (249)
T ss_dssp             ECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH-TSHHHHHHHT
T ss_pred             CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-CCHHHHHhcC
Confidence            9999999999999999999999999999999999888788888899998888888 7888888874

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

Probab=100.00  E-value=3e-36  Score=309.46  Aligned_cols=202  Identities=16%  Similarity=0.230  Sum_probs=176.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccc----cccccccccccCCCCEEE
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRF----TDEKSYCMPLYCKIPVIA  655 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~----~~~~~~~~~~~~~kp~Ia  655 (829)
                      ..|++|.+|+.+|.++++++++|+++|+|||+|.| ++||+|.|++++..........    .....+..+..+|||+||
T Consensus        20 ~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa   99 (230)
T d2a7ka1          20 KHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIA   99 (230)
T ss_dssp             TTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCcccccceeccchhhhhhhcccccccccccccccccchhhhhhhhhcccchhcceee
Confidence            46889999999999999999999999999999986 7999999999876532211110    112223445569999999


Q ss_pred             EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396        656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV  735 (829)
Q Consensus       656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v  735 (829)
                      +|||+|+|||++|+++|||||++++++|++||+++|++|++|+ .+|++++|.+++++++++|+.++++||+++||||+|
T Consensus       100 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~-~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~v  178 (230)
T d2a7ka1         100 AVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGA-AILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQV  178 (230)
T ss_dssp             EECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHH-HHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTCCSEE
T ss_pred             ecccccccccccchhccchhhccccchhhhccccccccccccc-cccccccccccccccccccccchHHHHHHhhhcccC
Confidence            9999999999999999999999999999999999999998775 579999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHH
Q psy11396        736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHEL  783 (829)
Q Consensus       736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~  783 (829)
                      +|++++.+++.+++++|++.||.+++.+|+.+++.+...+++.++.+.
T Consensus       179 v~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~  226 (230)
T d2a7ka1         179 VESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASK  226 (230)
T ss_dssp             ECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            999999999999999999999999999999999887766776665554

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-35  Score=284.88  Aligned_cols=160  Identities=28%  Similarity=0.408  Sum_probs=144.2

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF  447 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~  447 (829)
                      +|||+|+|+++++||.+...+.|++.++.++|+++|++++++|+||+|||+|||||+++|++|..||.++|+..   ..+
T Consensus         1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~---~~~   77 (161)
T d2gfva2           1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEA---ASR   77 (161)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGG---GTT
T ss_pred             CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhccc---ccc
Confidence            68999999999999999888999999999999999999999999999999999999999999999999999853   345


Q ss_pred             cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCC
Q psy11396        448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGF  527 (829)
Q Consensus       448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~  527 (829)
                      ++|+++|+++||+++|||++++++++++|++++|||++|+.+|++.+.+...    ..+..+    ...+++++||||||
T Consensus        78 ~~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~a~vnsfGf  149 (161)
T d2gfva2          78 VLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFV----PHEARQ----VSGMEYTLCNSFGF  149 (161)
T ss_dssp             SEEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCC----BSSCEE----CSSCCEEEEEEEEG
T ss_pred             ceeccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccc----cccCcc----CCCCcEEEEeCcCc
Confidence            8999999999999999999999999999999999999999999998765422    222222    24578999999999


Q ss_pred             CCceEEEEeee
Q psy11396        528 SGTNAHIVLME  538 (829)
Q Consensus       528 gG~na~~vl~e  538 (829)
                      ||+|+|+|||+
T Consensus       150 gG~Na~lil~~  160 (161)
T d2gfva2         150 GGTNGSLIFKK  160 (161)
T ss_dssp             GGEEEEEEEEC
T ss_pred             cceeEEEEEEE
Confidence            99999999996

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=100.00  E-value=4.4e-35  Score=281.36  Aligned_cols=157  Identities=24%  Similarity=0.329  Sum_probs=144.6

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF  447 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~  447 (829)
                      .|||+|+|++.++|+.+...+.|++.++.++|++||++++++|+||+|||+|||||+++|.+|..+|.++|+.      .
T Consensus         1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~------~   74 (158)
T d1ox0a2           1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------E   74 (158)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS------S
T ss_pred             CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC------c
Confidence            4899999999999999999999999999999999999999999999999999999999999999999999973      3


Q ss_pred             cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCC
Q psy11396        448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGF  527 (829)
Q Consensus       448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~  527 (829)
                      ++|+++|+++||+++|||++++++++++|++++|||++|+++++|+++++    ++..+.++|     ..+++++|||||
T Consensus        75 ~~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~a~~nsfGf  145 (158)
T d1ox0a2          75 VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN----VVYGQGLEK-----EIPYAISNTFGF  145 (158)
T ss_dssp             SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSE----ECBSSCEEC-----CCSEEEEEEEET
T ss_pred             ccCcCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcc----cccCccccC-----CCCEEEEeCcCC
Confidence            88999999999999999999999999999999999999999999998754    344444333     568999999999


Q ss_pred             CCceEEEEeeec
Q psy11396        528 SGTNAHIVLMEK  539 (829)
Q Consensus       528 gG~na~~vl~e~  539 (829)
                      ||+|+|+||++|
T Consensus       146 GG~Na~lvl~~~  157 (158)
T d1ox0a2         146 GGHNAVLAFKRW  157 (158)
T ss_dssp             TTEEEEEEEECC
T ss_pred             CcEeEEEEEEec
Confidence            999999999987

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.6e-35  Score=281.34  Aligned_cols=158  Identities=31%  Similarity=0.447  Sum_probs=143.9

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF  447 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~  447 (829)
                      +||++|+|+++++||.+...+.|++.++.++++++|+++|++|+||||||+|||||+.+|++|..||.++|+...   .+
T Consensus         1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~---~~   77 (159)
T d1j3na2           1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHA---KR   77 (159)
T ss_dssp             CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcC---CC
Confidence            689999999999999999999999999999999999999999999999999999999999999999999997532   35


Q ss_pred             cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCC
Q psy11396        448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGF  527 (829)
Q Consensus       448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~  527 (829)
                      ++|++.|+++||+++|||++++++++++|++++|||++|+++|++++++...+     ++  |   ...+++++||||||
T Consensus        78 ~~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-----~~--~---~~~~~~a~v~sfGf  147 (159)
T d1j3na2          78 LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP-----EP--R---EAKVDYALSNSFAF  147 (159)
T ss_dssp             CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS-----SC--E---ECCCSEEEEEEECT
T ss_pred             ceEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC-----cc--c---CCCCCEEEEeCCCC
Confidence            78999999999999999999999999999999999999999999988764322     22  2   34578999999999


Q ss_pred             CCceEEEEeee
Q psy11396        528 SGTNAHIVLME  538 (829)
Q Consensus       528 gG~na~~vl~e  538 (829)
                      ||+|+|+|||.
T Consensus       148 gG~Na~~vl~k  158 (159)
T d1j3na2         148 GGHNAVLAFKR  158 (159)
T ss_dssp             TSEEEEEEEEC
T ss_pred             CceeEEEEEEE
Confidence            99999999984

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.6e-35  Score=307.89  Aligned_cols=205  Identities=17%  Similarity=0.146  Sum_probs=167.8

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc--------------cccccccc
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT--------------DEKSYCMP  646 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~--------------~~~~~~~~  646 (829)
                      ..|++|.+|+.+|.++++++++|+++++|||+|.|++||+|+|++++...........              .......+
T Consensus        25 ~~Na~~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  104 (266)
T d1pjha_          25 NLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAF  104 (266)
T ss_dssp             GTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999999998865432211100              01122334


Q ss_pred             ccCCCCEEEEecccccchhhhhhhccccccccc-cceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396        647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSE-ESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE  725 (829)
Q Consensus       647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~-~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e  725 (829)
                      ..+||||||+|||+|+|||++|+++|||||+++ .++|++||+++|++|++|++++|+|++|+.++++++++|+.|+++|
T Consensus       105 ~~~~kP~IAav~G~a~GgG~~lal~~D~~ia~~~~~~~~~pe~~lGl~p~~g~~~~l~r~~g~~~a~~llltg~~~~a~e  184 (266)
T d1pjha_         105 IKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDI  184 (266)
T ss_dssp             HHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHTTCCEEHHH
T ss_pred             HhcchhhhhhhhcccccccccchhccchhhhhhccccccccccccccccccccccccccccccchhhhhhccCCcCCHHH
Confidence            459999999999999999999999999999965 5789999999999999999999999999999999999999999999


Q ss_pred             HHHcCCcccccChhhHHH------HHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHH
Q psy11396        726 LKERGISMPVLPRKQVLF------YSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTM  785 (829)
Q Consensus       726 A~~~GLv~~v~~~~~l~~------~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~  785 (829)
                      |+++||||+|++.+++..      .+.++++++...++.++..+|++++......+......|...
T Consensus       185 A~~~Glv~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~K~~l~~~~~~~~~~~~~~e~~~  250 (266)
T d1pjha_         185 MCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNE  250 (266)
T ss_dssp             HHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred             HHHCCCEeEeeCchhhhHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            999999999998543321      245677888889999999999999977655555544444333

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=100.00  E-value=2.1e-34  Score=277.96  Aligned_cols=160  Identities=29%  Similarity=0.421  Sum_probs=142.9

Q ss_pred             EEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccc
Q psy11396        370 YCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCA  449 (829)
Q Consensus       370 ~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~  449 (829)
                      |++|.|+++++|+.+.+.+.|++.++.++|+++|++++++|+||+|||+|||||+++|++|..|+.++|+... ...+++
T Consensus         1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~-~~~~~~   79 (161)
T d2ix4a2           1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHA-TSGTLA   79 (161)
T ss_dssp             CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHH-HTSCSE
T ss_pred             CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccc-ccccee
Confidence            7999999999999987777788888899999999999999999999999999999999999999999997532 234589


Q ss_pred             cCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCC
Q psy11396        450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSG  529 (829)
Q Consensus       450 v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG  529 (829)
                      |+++|+++||+++|||++++++++++|+++.+||++|+++|||.++....++.       | .....+|++++|||||||
T Consensus        80 i~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~a~~nsfGfgG  151 (161)
T d2ix4a2          80 FSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLT-------T-SKKMLVRTAMSNSFGFGG  151 (161)
T ss_dssp             EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCS-------S-CEECCCSEEEEEEEETTT
T ss_pred             eeccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccc-------c-CCCCCcCEEEEeCCcccc
Confidence            99999999999999999999999999999999999999999999987655432       2 112357899999999999


Q ss_pred             ceEEEEeee
Q psy11396        530 TNAHIVLME  538 (829)
Q Consensus       530 ~na~~vl~e  538 (829)
                      +|+|+||+.
T Consensus       152 ~Na~lvl~~  160 (161)
T d2ix4a2         152 TNASLLFAS  160 (161)
T ss_dssp             EEEEEEEEC
T ss_pred             eeEEEEEEe
Confidence            999999985

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=99.98  E-value=7.6e-34  Score=294.88  Aligned_cols=201  Identities=20%  Similarity=0.265  Sum_probs=173.6

Q ss_pred             ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---ccccccccccccCCCCEEEEe
Q psy11396        581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---FTDEKSYCMPLYCKIPVIAAM  657 (829)
Q Consensus       581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~kp~Iaav  657 (829)
                      ..|++|.+|+.+|.++++++++|+++|+|||+|.|+.||+|.|++++.........   ......+..+..+||||||+|
T Consensus        33 ~~Nal~~~~~~el~~al~~~~~d~~v~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~pvIa~v  112 (249)
T d1szoa_          33 KSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAV  112 (249)
T ss_dssp             BSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhCCCcceEeeecccccccccchhhhhhcccccchhhhhhhhhhhhhhcccCcccceeee
Confidence            46889999999999999999999999999999999999999999887432111110   011223344555999999999


Q ss_pred             cccccchhhhhhhccccccccccceec-cccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396        658 QGHAIGAGWAMGLFCDYTIFSEESVYQ-SPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL  736 (829)
Q Consensus       658 ~G~a~GgG~~lal~cD~~ia~~~a~f~-~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~  736 (829)
                      +|+|.| |++|+++||+||++++++|. +||+++|++|+++++++|+|++|+.++++++++|++|+++||+++||||+|+
T Consensus       113 ~g~~~G-G~~l~l~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv  191 (249)
T d1szoa_         113 NGPVTN-APEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVL  191 (249)
T ss_dssp             CSCBCS-STHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHHHHHHHTSCSEEE
T ss_pred             cccccc-ccccccccccccccCCcEEEEeeccccccccccccccccccccCccceeeecccCCCCCHHHHHHhCCcCccc
Confidence            998855 77899999999999999985 7999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHH
Q psy11396        737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE  782 (829)
Q Consensus       737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e  782 (829)
                      |++++.+++.+++++|++.|+.+++.+|+++++.+...++..+..+
T Consensus       192 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~e~~l~~~  237 (249)
T d1szoa_         192 SEQELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLG  237 (249)
T ss_dssp             CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            9999999999999999999999999999999987765555554443

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.3e-33  Score=262.78  Aligned_cols=150  Identities=34%  Similarity=0.504  Sum_probs=136.0

Q ss_pred             EEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccc
Q psy11396        370 YCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCA  449 (829)
Q Consensus       370 ~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~  449 (829)
                      |++|+|++.++||.+  ++.|+++++.++|+++++++   +.||||||+|||||+++|++|..||.++|+.     ..++
T Consensus         1 Yaei~G~g~~~Dg~~--~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~-----~~~~   70 (151)
T d2vbaa2           1 YAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD-----KSPA   70 (151)
T ss_dssp             CEEEEEEEEEECCSC--TTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT-----CCCE
T ss_pred             CEEEEEEEEecCCCC--CCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC-----CCcc
Confidence            799999999999975  77899999999999999876   6799999999999999999999999999974     3478


Q ss_pred             cCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCC
Q psy11396        450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSG  529 (829)
Q Consensus       450 v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG  529 (829)
                      |++.|+++||+++|||+.++++++++|++++|||++|++++++++.    .+.+.++.++|     +++++++|||||||
T Consensus        71 v~s~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~----~~~v~~~~~~~-----~~~~a~~nsfGfGG  141 (151)
T d2vbaa2          71 ISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAA----GLNIVTETTDR-----ELTTVMSNSFGFGG  141 (151)
T ss_dssp             EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCT----TSEECCSCEEC-----CCCEEEEEEEETTT
T ss_pred             cccchhhccccccchhhhhhhHHHHHHHcCCcccccCccccccccc----cccccCcCcCC-----CCCEEEEeCCcccc
Confidence            9999999999999999999999999999999999999999998764    34567776666     46789999999999


Q ss_pred             ceEEEEeee
Q psy11396        530 TNAHIVLME  538 (829)
Q Consensus       530 ~na~~vl~e  538 (829)
                      +|+|+||++
T Consensus       142 ~Na~~vl~~  150 (151)
T d2vbaa2         142 TNATLVMRK  150 (151)
T ss_dssp             EEEEEEEEC
T ss_pred             eeEEEEEEE
Confidence            999999986

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.97  E-value=2.1e-31  Score=271.19  Aligned_cols=201  Identities=21%  Similarity=0.344  Sum_probs=171.8

Q ss_pred             CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396        115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS  194 (829)
Q Consensus       115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~  194 (829)
                      ++|||||||+++|+|.++++||++|.+|+++|++++  +|+      +++.         .+.+.....||...+.++|+
T Consensus         1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~--~~~------~~~~---------~~~~~~~~~~~~~~~~~~~~   63 (216)
T d1tqya1           1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS--FFD------PSPY---------RSQVAAEADFDPVAEGFGPR   63 (216)
T ss_dssp             CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECC--SSC------CTTS---------SCCEEECCCCCHHHHTCCHH
T ss_pred             CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCC--ccC------CCcc---------cccccccccccccccccChh
Confidence            589999999999999999999999999999999986  332      2221         11222233477777789999


Q ss_pred             HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccccc--------------Cccccchhhhccccc
Q psy11396        195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLIT--------------DPKMYNAYALMGESV  260 (829)
Q Consensus       195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~--------------~~~~~~~~~~~~~~~  260 (829)
                      +++.|++.+++++.++++||+|||++++++.+.++|++++++.+.+.....              +.....++.++...+
T Consensus        64 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (216)
T d1tqya1          64 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP  143 (216)
T ss_dssp             HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred             hhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCc
Confidence            999999999999999999999999999999999999999988765432211              123455667777788


Q ss_pred             cchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC
Q psy11396        261 SILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD  332 (829)
Q Consensus       261 ~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~  332 (829)
                      +.+++++++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|...+|..+..|++++.||..
T Consensus       144 ~~~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~  215 (216)
T d1tqya1         144 SVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR  215 (216)
T ss_dssp             THHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred             hHHHHHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999864

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.97  E-value=1.9e-31  Score=269.77  Aligned_cols=198  Identities=22%  Similarity=0.308  Sum_probs=171.8

Q ss_pred             CEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHHH
Q psy11396        116 DIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSE  195 (829)
Q Consensus       116 ~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~  195 (829)
                      .|||||||+++|+|.++++||++|.+|++++++++  ||+...+.           ....+.++   .|++..+ +++++
T Consensus         1 ~VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~--~~~~~~~~-----------~~~~~~~~---~~~~~~~-~~~~~   63 (208)
T d1tqyb1           1 SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT--RFDVSRYP-----------ATLAGQID---DFHAPDH-IPGRL   63 (208)
T ss_dssp             CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECT--TTTGGGSS-----------CCEEECCC---SCCHHHH-SCTTT
T ss_pred             CEEEEcceeECCCcCCHHHHHHHHHcCCCceecCc--ccCchhcc-----------cccccccc---ccccccc-CChhH
Confidence            38999999999999999999999999999999885  66554432           22233333   3555554 78999


Q ss_pred             hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhHh
Q psy11396        196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPARV  267 (829)
Q Consensus       196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~i  267 (829)
                      .+.|||++++++.++.+||+|||+++.+++..++|+++|++.+......        ..++...++.+++..+++.+++|
T Consensus        64 ~~~~~~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~i  143 (208)
T d1tqyb1          64 LPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQI  143 (208)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHH
T ss_pred             hhccccccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchh
Confidence            9999999999999999999999999999999999999999876542221        34567788889999999999999


Q ss_pred             hhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC
Q psy11396        268 SYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP  331 (829)
Q Consensus       268 a~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~  331 (829)
                      ++.||++||+++|+++|+||+.||..|+++|++| ||++||||+|..++|..+..|.++++||.
T Consensus       144 a~~~gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt  206 (208)
T d1tqyb1         144 SIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST  206 (208)
T ss_dssp             HHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred             hhcccccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence            9999999999999999999999999999999999 99999999999999999999999999984

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.50  E-value=1e-13  Score=151.11  Aligned_cols=256  Identities=13%  Similarity=0.133  Sum_probs=157.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc--e
Q psy11396        201 PQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC--L  278 (829)
Q Consensus       201 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~--~  278 (829)
                      ....|+.+|+++||++||+++++|+    -+++++.. +|.                  ....+.+|...||++...  +
T Consensus        91 ~~~~la~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~------------------~P~~a~~v~~~LGl~~~~~~~  147 (372)
T d1teda_          91 HAVPLAVDVSKRALAGLPYRAAEIG----LLVLATST-GFI------------------APGVDVAIVKELGLSPSISRV  147 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCGGGEE----EEEEEESS-CCC------------------SSCHHHHHHHHHTCCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccC-CCC------------------CchHHHHHHhhhccCCceeEe
Confidence            3557999999999999999999987    66666543 331                  124677899999997543  3


Q ss_pred             eec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396        279 AID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLK  357 (829)
Q Consensus       279 tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~  357 (829)
                      .+. .||++++.||..|..+|++|..+.+||+++|.+....          ...+    .++.....+.+||||+|+||+
T Consensus       148 ~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~----------~~~d----~~~~~~~~~lfGDGAaA~ll~  213 (372)
T d1teda_         148 VVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA----------VFAD----DINDVVIHSLFGDGCAALVIG  213 (372)
T ss_dssp             EEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC----------CCCS----SHHHHHHHHHBCEEEEEEEEE
T ss_pred             eccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccc----------cCCC----cchhhhhhhhhcccceeEEec
Confidence            343 5899999999999999999999999999999753110          0000    000011235689999999998


Q ss_pred             cchhhhhCCCceEEEEEEeeeec-CCCCC---------C---CCCCC-----HHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396        358 KLKDAKKDGDDIYCIIKGWGVNQ-DGKTN---------G---ITAPN-----TKSQIRLQTKIYKKFNINPNDIQLLEAH  419 (829)
Q Consensus       358 ~~~~A~~~g~~i~a~I~g~~~~~-dg~~~---------~---~~~p~-----~~~~~~ai~~Al~~Agl~~~dId~ve~h  419 (829)
                      +.+...... .....+.+..... .....         +   ...+.     .....++++++|+++|++++|||++.+|
T Consensus       214 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~H  292 (372)
T d1teda_         214 ASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIH  292 (372)
T ss_dssp             EECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEEC
T ss_pred             cCCcccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhcc
Confidence            765432221 1222333322111 11000         0   00111     3456788999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCC
Q psy11396        420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN  498 (829)
Q Consensus       420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~  498 (829)
                      -.+..     =.+++.+.++-   ..+.++.+ .+-..+||+.+|+=...|-.   .++++.+.                
T Consensus       293 q~~~~-----i~~~i~~~Lgl---~~ek~~~s~~~l~~~GN~~sasip~~L~~---~l~~g~~~----------------  345 (372)
T d1teda_         293 PGGPK-----IIEQSVRSLGI---SAELAAQSWDVLARFGNMLSVSLIFVLET---MVQQAESA----------------  345 (372)
T ss_dssp             CSCHH-----HHHHHHHHHTC---CGGGGHHHHHHHHHHCBCTHHHHHHHHHH---HHHSCSSS----------------
T ss_pred             CccHH-----HHHHHHHHcCC---CHHHhhhhHHHHhccCCcHHHHHHHHHHH---HHHhCCCC----------------
Confidence            65543     33444555542   11222211 11234599988774443333   33443221                


Q ss_pred             CCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                                      ....++++.+||-|=+-..+|||
T Consensus       346 ----------------~g~d~vll~~fG~G~s~~~~ll~  368 (372)
T d1teda_         346 ----------------KAISTGVAFAFGPGVTVEGMLFD  368 (372)
T ss_dssp             ----------------SSSEEEEEEEEETTTEEEEEEEE
T ss_pred             ----------------CCCCEEEEEEEcHHHhHHHHhhe
Confidence                            12256788899987666667766

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.09  E-value=6.9e-11  Score=121.36  Aligned_cols=92  Identities=16%  Similarity=0.190  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv  280 (829)
                      ..|+..++.++|+++|+++++|+    .|++|......                  ....++..++...|+.  -|+++|
T Consensus        28 ~dL~~~~~~~~l~~~~i~~~~Id----~vi~G~~~~~~------------------~~~n~ar~~al~aglp~~vpa~tv   85 (268)
T d1m3ka1          28 HELGATVISAVLERAGVAAGEVN----EVILGQVLPAG------------------EGQNPARQAAMKAGVPQEATAWGM   85 (268)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCTT------------------SCSCHHHHHHHHTTCCTTSEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCc----EEEEeeccccC------------------cchHHHhHHHHHhCCcccccceee
Confidence            35888999999999999999999    78888643211                  1234566777777874  589999


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT  316 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~  316 (829)
                      +..|+||+.||.+|+++|++|++|++|+||+|+|+.
T Consensus        86 ~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~  121 (268)
T d1m3ka1          86 NQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSM  121 (268)
T ss_dssp             ECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred             cccCcccchHHHHHHHHHhCCCceEEeecccccccc
Confidence            999999999999999999999999999999998773

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.07  E-value=4.4e-10  Score=115.84  Aligned_cols=92  Identities=18%  Similarity=0.306  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceeec
Q psy11396        204 RLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAID  281 (829)
Q Consensus       204 ~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv~  281 (829)
                      .|+..+++++|+++|+++++++    .|++|......                 .....++..++...|+  .-|.++|+
T Consensus        26 dL~~~a~~~al~~~~i~~~~Id----~vi~G~v~~~g-----------------~~~~n~aR~~al~aGlp~~vp~~tVn   84 (273)
T d1ulqa1          26 DLLAHALSVLVDRSGVPKEEVE----DVYAGCANQAG-----------------EDNRNVARMALLLAGFPVEVAGCTVN   84 (273)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSS-----------------TTTTTHHHHHHHHTTCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccc-----------------cccccHHHHHHHHcCCCCccceEEEe
Confidence            4788899999999999999999    78888543211                 1122356667777777  44999999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINT  316 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~  316 (829)
                      ..|+||+.||.+|++.|++|..|++|+||+|+|+.
T Consensus        85 ~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~  119 (273)
T d1ulqa1          85 RLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR  119 (273)
T ss_dssp             CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSS
T ss_pred             cccchHHHHHHHHHHHHhcCCCccceeeeccccch
Confidence            99999999999999999999999999999998763

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.07  E-value=1.5e-10  Score=110.90  Aligned_cols=120  Identities=18%  Similarity=0.205  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID  281 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~  281 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..++|.                  ....+..|...||.+.+++.|+
T Consensus        49 ~~~ma~~Aa~~aL~~agi~~~dId----lli~~s~t~~~~------------------~p~~a~~v~~~Lg~~~~~~di~  106 (172)
T d1ub7a1          49 TSDLAFKAVEDLLRRHPGALEGVD----AVIVATNTPDAL------------------FPDTAALVQARFGLKAFAYDLL  106 (172)
T ss_dssp             HHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSSCSEE------------------ESCHHHHHHHHTTCCCEEEEEE
T ss_pred             ccHHHHHHHHHHHhhcCcccccce----EEEEeccccccc------------------ccchHHHHHHHhccCccceeeh
Confidence            557999999999999999999998    777776655442                  3345678888899988999999


Q ss_pred             cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396        282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD  361 (829)
Q Consensus       282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~  361 (829)
                      .+|++++.+|..|..++++|.++.+|++++|.++..           +.       |+.....+++||||+|+||++.+.
T Consensus       107 ~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~-----------~~-------~~d~~~~~lfGDgAaA~ll~~~~~  168 (172)
T d1ub7a1         107 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKI-----------ID-------WNDRATAVLFGDGGGAAVVGKVRE  168 (172)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGT-----------SC-------TTCHHHHTTBCCEEEEEEEECCCT
T ss_pred             hccccHHHHHHHHhhhhhcCCcceeEEecccccccc-----------cC-------CCCcCeEEEecceeEEEEEEEcCC
Confidence            999999999999999999999999999999975311           11       122234567899999999987653

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=99.02  E-value=5.3e-10  Score=108.00  Aligned_cols=119  Identities=18%  Similarity=0.250  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    .+++++..+++.                  ....+..+...++.+ .+++.|
T Consensus        58 ~~~ma~~Aa~~aL~~a~~~~~dId----~li~~s~~~~~~------------------~p~~a~~v~~~l~~~~~~~~Dv  115 (181)
T d1mzja1          58 IQVMGVAASRRALEHAGVDPAEID----LVVVSTMTNFVH------------------TPPLSVAIAHELGADNAGGFDL  115 (181)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCCCC------------------SSCHHHHHHHHHTCTTCEEEEE
T ss_pred             HHHHhHHHHHhhhhhccCChhHCe----EEEEeccCCccc------------------cccHHHHHHHhhcCCCccceeH
Confidence            457999999999999999999998    788887665542                  234567788888885 478889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|++++.||..|..+|++|.++.+|+.++|.++..           +       .++.....+.+||||+|+||++.+
T Consensus       116 ~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~~-----------~-------~~~d~~~~~lfGDGAaA~ll~~~~  177 (181)
T d1mzja1         116 SAACAGFCHALSIAADAVESGGSRHVLVVATERMTDV-----------I-------DLADRSLSFLFGDGAGAAVVGPSD  177 (181)
T ss_dssp             ECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGG-----------S-------CSSCTTTTTTBCEEEEEEEEEEES
T ss_pred             HhhhccHHHHHHHHhCHhhcCCCceeEEeeecccccc-----------C-------CCCCcceEEEeeeeeEEEEEEeCC
Confidence            9999999999999999999999999999999975311           1       122234567899999999998754

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=99.02  E-value=2.1e-10  Score=110.21  Aligned_cols=119  Identities=18%  Similarity=0.263  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI  280 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv  280 (829)
                      ...|+.+|+++||+++|+++++++    -+++++..++|.                  ....+..|...||++. +++.|
T Consensus        51 ~~~la~~Aa~~al~~a~~~~~~Id----~li~~s~~~~~~------------------~P~~a~~v~~~Lgl~~~~~~di  108 (174)
T d1hnja1          51 VSTMGFEAATRAIEMAGIEKDQIG----LIVVATTSATHA------------------FPSAACQIQSMLGIKGCPAFDV  108 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCCSCS------------------SSCHHHHHHHHHTCCSSCEEEE
T ss_pred             chHHHHHHHHHhhhhccccccccc----EEEEecCCcccc------------------ccchhhhhhhccCCCchhhhhh
Confidence            456999999999999999999998    788887765542                  2346778999999975 78889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK  360 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~  360 (829)
                      +.+|++++.||..|..+|++|.++.+|+++.|..+..           +.       ++.....+.+||||+|++|++.+
T Consensus       109 ~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S~~-----------~~-------~~d~~~~~lfGDgA~A~vl~~~~  170 (174)
T d1hnja1         109 AAACAGFTYALSVADQYVKSGAVKYALVVGSDVLART-----------CD-------PTDRGTIIIFGDGAGAAVLAASE  170 (174)
T ss_dssp             CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHH-----------SC-------TTCHHHHTTBCCEEEEEEEEEES
T ss_pred             hhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhhcc-----------cC-------CCCCCeEEEeceeeEEEEEEeCC
Confidence            9999999999999999999999999999999975211           11       11122346789999999999765

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=98.94  E-value=1.5e-09  Score=110.74  Aligned_cols=94  Identities=18%  Similarity=0.304  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHH-cCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396        203 QRLFLQNCWTCIED-AGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA  279 (829)
Q Consensus       203 ~~l~l~aa~~AL~d-AGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t  279 (829)
                      ..|+..+++++|++ +|+++++++    .|++|.....-                 .....++..++...|+  .-|+++
T Consensus        31 ~dL~~~~i~~~l~r~agi~~~~Id----~vi~G~v~~~~-----------------~~g~n~aR~~al~ag~p~~vp~~t   89 (262)
T d1wdkc1          31 EDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQTL-----------------EQGWNIARMASLMTQIPHTSAAQT   89 (262)
T ss_dssp             HHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSBSB-----------------TTTTTHHHHHHTTSSSCTTSEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCHHHee----EEEEEeecccc-----------------cccccchhhhHhhhhcccccchhh
Confidence            35888899999995 999999999    77887543211                 0112346667776666  348999


Q ss_pred             eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccCh
Q psy11396        280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP  317 (829)
Q Consensus       280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~  317 (829)
                      |+..|+||+.||..|++.|++|.+|++|+||+|+|+..
T Consensus        90 V~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~  127 (262)
T d1wdkc1          90 VSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHV  127 (262)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTS
T ss_pred             ccccccHHHHHHHHHHHHHHhhcCCceeeecccccccc
Confidence            99999999999999999999999999999999998653

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=9.5e-10  Score=97.20  Aligned_cols=120  Identities=13%  Similarity=0.125  Sum_probs=85.2

Q ss_pred             CCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHH--HHHhcccCC
Q psy11396        366 GDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL--CESFNKFSY  443 (829)
Q Consensus       366 g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al--~~~~~~~~~  443 (829)
                      |.+|+|+|.+++.........     +.+...+++++|+++|++++|||+||.|       +..-++.+  .+.++   .
T Consensus         2 gl~plAri~~~a~~g~~P~~m-----~~gPv~Ai~klL~r~gl~~~Did~~Ein-------EAFA~q~l~~~~~l~---i   66 (124)
T d1afwa2           2 NLPVLGRYIDFQTVGVPPEIM-----GVGPAYAIPKVLEATGLQVQDIDIFEIN-------EAFAAQALYCIHKLG---I   66 (124)
T ss_dssp             TCCCCEEEEEEEEEECCGGGG-----GGHHHHHHHHHHHHHTCCGGGCSEEEEC-------CSBHHHHHHHHHHHT---C
T ss_pred             CCcEEEEEEEEEEEecCHHHh-----hhChHHHHHHHHHHcCCCcccCcEEEec-------cchhHHHHHHHHHcC---C
Confidence            678999999998875432221     3355789999999999999999999999       33333333  22232   2


Q ss_pred             CCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEe
Q psy11396        444 HKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN  523 (829)
Q Consensus       444 ~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~  523 (829)
                      ....+.+..---.+|||.||||...++.++.+|+++                                      ++++++
T Consensus        67 d~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~~--------------------------------------~~glas  108 (124)
T d1afwa2          67 DLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD--------------------------------------QIGVVS  108 (124)
T ss_dssp             CGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT--------------------------------------CEEEEE
T ss_pred             ChhhccccCccceecCCcCCchHHHHHHHHHHhccC--------------------------------------CEEEEE
Confidence            233344444444579999999999999999988542                                      346666


Q ss_pred             ccCCCCceEEEEeee
Q psy11396        524 SFGFSGTNAHIVLME  538 (829)
Q Consensus       524 s~G~gG~na~~vl~e  538 (829)
                      ...=||.-.++|+|+
T Consensus       109 ~C~ggG~G~a~~ier  123 (124)
T d1afwa2         109 MCIGTGMGAAAIFIK  123 (124)
T ss_dssp             EEETTTEEEEEEEEE
T ss_pred             EcccCCcEEEEEEEe
Confidence            666778888888885

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=98.89  E-value=2.6e-09  Score=94.36  Aligned_cols=122  Identities=12%  Similarity=0.135  Sum_probs=86.9

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHH--HhcccCCCC
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCE--SFNKFSYHK  445 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~--~~~~~~~~~  445 (829)
                      +|+|+|.+++...........     +...+++++|+++|++++|||+||.|       +..-++.+.-  .++ ...+.
T Consensus         1 KPlA~i~~~~~~g~~P~~~~~-----~P~~A~~~~L~r~gl~~~Did~~Ein-------EAFAaq~l~~~~~~~-l~~d~   67 (125)
T d1ulqa2           1 RPLARVRAIAVAGVPPRIMGI-----GPVPATRKALERAGLSFSDLGLIELN-------EAFAAQALAVLREWS-LSMED   67 (125)
T ss_dssp             CCSEEEEEEEEEECCGGGGGG-----THHHHHHHHHHHTTCCGGGCSEEEEC-------CSBHHHHHHHHHHHT-CCTTC
T ss_pred             CCeEEEEEEEEEecCHHHHhh-----ccHHHHHhHhhccCcCccccchheec-------cccchhHHHHHHHhh-ccCch
Confidence            468899999876543332222     34779999999999999999999999       3333444432  222 11223


Q ss_pred             CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEecc
Q psy11396        446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF  525 (829)
Q Consensus       446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~  525 (829)
                      +.+.+..---.+|||+||||...++.++..|+++                                    ..++++++..
T Consensus        68 ~kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~------------------------------------~~~~G~as~C  111 (125)
T d1ulqa2          68 QRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------------------------------------KVQFGLATMC  111 (125)
T ss_dssp             TTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------------------------------------TCSEEEEEEE
T ss_pred             hhcCCCCCcccccCCccccchhHHHHHHHHHHhc------------------------------------CCCEEEEEec
Confidence            3444544444579999999999999999999762                                    2357788888


Q ss_pred             CCCCceEEEEeee
Q psy11396        526 GFSGTNAHIVLME  538 (829)
Q Consensus       526 G~gG~na~~vl~e  538 (829)
                      .-||...+++||.
T Consensus       112 ~gGG~g~A~~iE~  124 (125)
T d1ulqa2         112 IGVGQGIAVVVEG  124 (125)
T ss_dssp             ETTTEEEEEEEEE
T ss_pred             ccccceeEEEEEe
Confidence            8899999999984

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=98.87  E-value=1.7e-09  Score=96.08  Aligned_cols=125  Identities=14%  Similarity=0.099  Sum_probs=88.1

Q ss_pred             CCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH--hcccCC
Q psy11396        366 GDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES--FNKFSY  443 (829)
Q Consensus       366 g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~--~~~~~~  443 (829)
                      |.+|+++|++++..........     .+...+++++|+++|++++|||++|.|       +..-++++.-.  +.....
T Consensus         1 Gl~pla~i~~~~~~g~dP~~mg-----~~p~~A~~klL~ragl~~~did~~Ein-------EAFA~q~l~~~~~~~~~~~   68 (128)
T d1wdkc2           1 GLEPLAVIRSMAVAGVDPAIMG-----YGPVPATQKALKRAGLNMADIDFIELN-------EAFAAQALPVLKDLKVLDK   68 (128)
T ss_dssp             TCCCSEEEEEEEEEECCGGGGG-----GTHHHHHHHHHHHHTCCGGGCCEEEEC-------CSBHHHHHHHHHHTTCGGG
T ss_pred             CCCEEEEEEEEEEEecCHHHhc-----cCcHHHHHHHhhhcCccccccceEEee-------cccchhhhhhhhhcccccC
Confidence            5678999999988764333222     234779999999999999999999999       33444544322  111110


Q ss_pred             CCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEe
Q psy11396        444 HKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN  523 (829)
Q Consensus       444 ~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~  523 (829)
                      ..+.+.+..---.+|||.||||+..++.++.+|+++                                    ..++++++
T Consensus        69 ~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~------------------------------------~~~~Glas  112 (128)
T d1wdkc2          69 MNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN------------------------------------GGTFGLST  112 (128)
T ss_dssp             HHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------------------------------------TCSEEEEE
T ss_pred             CcceecCCCCcccccccccccchhHHHHHHHHHHhc------------------------------------CCCEEEEE
Confidence            112234444444579999999999999999999772                                    23578888


Q ss_pred             ccCCCCceEEEEeee
Q psy11396        524 SFGFSGTNAHIVLME  538 (829)
Q Consensus       524 s~G~gG~na~~vl~e  538 (829)
                      ...-||.-.+++||.
T Consensus       113 ~C~gGG~g~A~~iEr  127 (128)
T d1wdkc2         113 MCIGLGQGIATVFER  127 (128)
T ss_dssp             EEETTTEEEEEEEEC
T ss_pred             ecccccceeEEEEEe
Confidence            888899999999984

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=98.86  E-value=3.1e-09  Score=106.72  Aligned_cols=120  Identities=12%  Similarity=0.031  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc--e
Q psy11396        201 PQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC--L  278 (829)
Q Consensus       201 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~--~  278 (829)
                      ....|+.+|+++||++||+++++|+    .+++.+..+.+.                  ++ ....+...+++....  +
T Consensus       101 ~~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~~~~------------------p~-~~a~~~~~l~~~~~~~~~  157 (235)
T d1bi5a1         101 EVPRLGKEAAVKAIKEWGQPKSKIT----HLIVCTTSGVDM------------------PG-ADYQLTKLLGLRPYVKRY  157 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESSCCCS------------------SC-HHHHHHHHHTCCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCChhHCc----EEEEecccCCcc------------------Cc-cHHHHHHHHhcCCCceEE
Confidence            3457999999999999999999998    888887654331                  22 234555666665432  3


Q ss_pred             -eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC-----CCcccccceE
Q psy11396        279 -AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA-----NGFVPGEGVG  352 (829)
Q Consensus       279 -tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~-----~G~~~gEGaa  352 (829)
                       .++.+|++++.+|..|..+|++|..+.+||+++|.++...                 .+-|...     ..+.+||||+
T Consensus       158 ~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~-----------------~~~d~~~~~~~v~~~lFGDGA~  220 (235)
T d1bi5a1         158 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTF-----------------RGPSDTHLDSLVGQALFGDGAA  220 (235)
T ss_dssp             EEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTC-----------------CCCCTTCHHHHHHHHHBCCEEE
T ss_pred             eeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeecceec-----------------CCCCCCchhhhcceeeeccceE
Confidence             3578999999999999999999999999999999753211                 0001111     1246899999


Q ss_pred             EEEEccch
Q psy11396        353 VLMLKKLK  360 (829)
Q Consensus       353 alvL~~~~  360 (829)
                      |+||....
T Consensus       221 A~vl~~~p  228 (235)
T d1bi5a1         221 ALIVGSDP  228 (235)
T ss_dssp             EEEEESSC
T ss_pred             EEEEecCC
Confidence            99998643

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=98.85  E-value=2e-09  Score=94.92  Aligned_cols=120  Identities=14%  Similarity=0.173  Sum_probs=87.0

Q ss_pred             ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHH--HHHhcccCCCC
Q psy11396        368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL--CESFNKFSYHK  445 (829)
Q Consensus       368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al--~~~~~~~~~~~  445 (829)
                      +|+|+|.+++..........     .+...+++++|+++|++.+|||+||.|       +..-++++  .+.++   ...
T Consensus         2 ~Plari~~~a~~g~dP~~mg-----~~Pv~A~~~lL~r~gl~~~Did~~Ein-------EAFA~q~la~~~~l~---id~   66 (124)
T d1m3ka2           2 QPLGRIVSWATVGVDPKVMG-----TGPIPASRKALERAGWKIGDLDLVEAN-------EAFAAQACAVNKDLG---WDP   66 (124)
T ss_dssp             CCSEEEEEEEEEECCGGGGG-----GTHHHHHHHHHHHHTCCGGGCSEEEEC-------CSBHHHHHHHHHHHC---CCG
T ss_pred             CcEEEEEEEEEEecChHHhc-----cchHHHHHHHHHHcCCChhcccHHHhc-------ccchhheeeehHhhC---CCh
Confidence            57899999987654333222     234679999999999999999999999       33333433  22332   233


Q ss_pred             CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEecc
Q psy11396        446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF  525 (829)
Q Consensus       446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~  525 (829)
                      +.+.+..---.+|||.||||+..+..++..|+++                                    ..++++++..
T Consensus        67 ~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~------------------------------------~~~~Glas~C  110 (124)
T d1m3ka2          67 SIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------------------------------GARKGLATLC  110 (124)
T ss_dssp             GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH------------------------------------TCSEEEEEEE
T ss_pred             hhcCCCCCccccccCcCccchhHHHHHHHHHHhc------------------------------------CCCEEEEEec
Confidence            4455544444579999999999999999999771                                    2357888888


Q ss_pred             CCCCceEEEEeee
Q psy11396        526 GFSGTNAHIVLME  538 (829)
Q Consensus       526 G~gG~na~~vl~e  538 (829)
                      .=||...+++||.
T Consensus       111 ~gGG~g~A~liE~  123 (124)
T d1m3ka2         111 IGGGMGVAMCIES  123 (124)
T ss_dssp             ETTTEEEEEEEEC
T ss_pred             ccccceeEEEEEe
Confidence            8889999999884

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.77  E-value=1.5e-08  Score=99.10  Aligned_cols=117  Identities=13%  Similarity=0.081  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396        202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA  279 (829)
Q Consensus       202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t  279 (829)
                      ...|+..|+++||+++|+++++++    .+++++..+ |.                  ....+..+...+|+.+  +.+.
T Consensus        75 a~~la~~Aa~~aL~~ag~~~~dId----~lI~~s~t~-~~------------------~P~~aa~v~~~lg~~~~~~~~~  131 (200)
T d1u0ma1          75 AKSRVPAVIQRALDDAELLATDID----VIIYVSCTG-FM------------------MPSLTAWLINEMGFDSTTRQIP  131 (200)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSSS-CC------------------SSCHHHHHHHHTTCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCChhhhh----eEEEeccCC-CC------------------cchhHHHHHHHHhcCCCeeEec
Confidence            457999999999999999999998    777775542 21                  1235678889999875  3455


Q ss_pred             e-ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC----CCcccccceEEE
Q psy11396        280 I-DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA----NGFVPGEGVGVL  354 (829)
Q Consensus       280 v-~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~----~G~~~gEGaaal  354 (829)
                      + +.+|++++.+|..|..+|++|..+.+||+++|.++...                 +|-|.+.    ..+.+||||+|+
T Consensus       132 i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~~~-----------------~~~d~~~~~~~~~~lFgDGAaA~  194 (200)
T d1u0ma1         132 IAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCY-----------------QPTDLGVGSLLCNGLFGDGIAAA  194 (200)
T ss_dssp             ECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGGC-----------------CTTCCSHHHHHHHHHBCEEEEEE
T ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-----------------CCCCCChhhhhcccccccccEEE
Confidence            5 57999999999999999999999999999999754111                 1111111    124679999999


Q ss_pred             EEcc
Q psy11396        355 MLKK  358 (829)
Q Consensus       355 vL~~  358 (829)
                      ||.+
T Consensus       195 ll~~  198 (200)
T d1u0ma1         195 VVRG  198 (200)
T ss_dssp             EEET
T ss_pred             EEec
Confidence            9975

>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP
species: Streptomyces coelicolor, A3(2) [TaxId: 1902]

Probab=98.57  E-value=8e-09  Score=86.44  Aligned_cols=69  Identities=9%  Similarity=-0.015  Sum_probs=63.5

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .|++.++++++..+|.+ ++.+++|..|. |+|+ |||.++||.++|++.+|+++|++..|++||+..++.+
T Consensus         9 ~l~~~l~e~~~~~~g~~-~~~i~~d~~f~-dlG~-DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~   77 (86)
T d2af8a_           9 DLRRALVECAGETDGTD-LSGDFLDLRFE-DIGY-DSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDL   77 (86)
T ss_dssp             HHHHHHHHTTCCCSCCC-CSSCSCSSSHH-HHTC-SSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHccccCCC-ccccccCCCHH-HcCC-CHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHH
Confidence            47888888999999985 78999999999 9999 9999999999999999999999999999999887665

>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP
species: Streptomyces roseofulvus [TaxId: 33902]

Probab=98.54  E-value=6.1e-09  Score=86.16  Aligned_cols=68  Identities=9%  Similarity=-0.014  Sum_probs=57.0

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS  102 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~  102 (829)
                      |++.++++++..+|..  ..+++|.+|. |+|+ |||+++||+++|++.+|+.+|++..|++||+..++.+-
T Consensus         8 l~~il~e~~g~~~~~~--~~~d~d~~f~-dlG~-DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v   75 (82)
T d1or5a_           8 LKKLLAETAGEDDSVD--LAGELDTPFV-DLGY-DSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEV   75 (82)
T ss_dssp             HHHHHHHHSCCCSSCC--GGGCSSSCHH-HHSC-CHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHH
T ss_pred             HHHHHHHHhCCCcccc--cCCCcCcCHH-HcCC-ChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHH
Confidence            5555566666555544  2468899998 9999 99999999999999999999999999999999887764

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=4.8e-08  Score=99.63  Aligned_cols=92  Identities=20%  Similarity=0.223  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHH----HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcc
Q psy11396        204 RLFLQNCWTCIE----DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPC  277 (829)
Q Consensus       204 ~l~l~aa~~AL~----dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~  277 (829)
                      .|+..+.+++++    ++|+++++++    .|++|.....                 + ....++..++..-|+  .-|.
T Consensus        37 ~L~~~~i~~~l~r~~~~~~idp~~Id----~vi~G~v~~~-----------------g-~~~~~aR~~al~aglp~~vpa   94 (269)
T d1afwa1          37 YLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLNV-----------------G-AGATEHRAACLASGIPYSTPF   94 (269)
T ss_dssp             HHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSSB-----------------G-GGHHHHHHHHHHTTCCTTSCE
T ss_pred             HHHHHHHHHHHHhCCccccCChhhcC----EEEecccccc-----------------c-cccccchhhhhhccccccccc
Confidence            467778888886    5679999999    6778754210                 1 122356667777776  4699


Q ss_pred             eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccCh
Q psy11396        278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP  317 (829)
Q Consensus       278 ~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~  317 (829)
                      ++|+..|+||+.||..|++.|++|+.|++|+||+|+|+..
T Consensus        95 ~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~  134 (269)
T d1afwa1          95 VALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNN  134 (269)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHH
T ss_pred             hhccccchHHHHHHHHHHHHHhhccccceeeeeccccccc
Confidence            9999999999999999999999999999999999998643

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.48  E-value=3.2e-08  Score=93.84  Aligned_cols=112  Identities=15%  Similarity=0.155  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396        203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI  280 (829)
Q Consensus       203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv  280 (829)
                      ..|++.|+++||++.+  +++++    -+++++..+++                  .....+..+...+|+..  .++.+
T Consensus        51 ~~ma~~Aa~~al~~~~--~~~id----~li~~t~~~~~------------------~~p~~a~~v~~~lg~~~~~~~~dv  106 (166)
T d1xpma1          51 VSMGANAAKDIITDED--KKKIG----MVIVATESAVD------------------AAKAAAVQIHNLLGIQPFARCFEM  106 (166)
T ss_dssp             HHHHHHHHHTTCCHHH--HHHEE----EEEEECSSCSB------------------SSSCHHHHHHHHTTCCSSCEEEEE
T ss_pred             HHHHHHHHHhhhcccc--CCCCC----eEEEecccccc------------------ccchhHHHHHHhhccccceEEeee
Confidence            4589999999988764  44554    45666554443                  13445778888899864  66889


Q ss_pred             ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396        281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL  359 (829)
Q Consensus       281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~  359 (829)
                      +.+|++++.||..|..+|++|..+.+||.+.|.....                    ++ ..+-+..||||+|+||++.
T Consensus       107 ~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~--------------------~~-~~~~~~fGDGA~A~ll~~~  164 (166)
T d1xpma1         107 KEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG--------------------LN-SGGEPTQGAGAVAMVIAHN  164 (166)
T ss_dssp             ESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC--------------------TT-CSSGGGCEEEEEEEEEEES
T ss_pred             cccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc--------------------CC-CCCCccCCCeeEEEEEecC
Confidence            9999999999999999999999999999999964311                    01 1223568999999999863

>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Type I fatty acid synthase ACP domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.47  E-value=1.9e-08  Score=81.93  Aligned_cols=66  Identities=5%  Similarity=0.068  Sum_probs=58.4

Q ss_pred             HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      ++-+.++++.+||.+++++|+++..|. |+|+ |||+++||+++|++.+|+.++.+..| ++|...+++
T Consensus         6 e~~l~~~va~~Lgi~~~~~I~~~~~f~-~lG~-DSl~a~el~~~i~~~~g~~l~~~~l~-~~Ti~~L~e   71 (76)
T d2pnga1           6 QRDLVKAVAHILGIRDLAGINLDSSLA-DLGL-DSLMGVEVRQILEREHDLVLPIREVR-QLTLRKLQE   71 (76)
T ss_dssp             CCCGGGTHHHHHTCSSCTTSCSSSCHH-HHTC-SSHHHHHHHHHHHHHTCCCCCHHHHT-TCCSHHHHH
T ss_pred             HHHHHHHHHHHhccCCHhhCCCCCCHH-HhCC-cHHHHHHHHHHHHHHhCCCCCHHHHH-HhhHHHHHH
Confidence            345678899999999999999999999 9999 99999999999999999999999876 477665554

>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Oxytetracycline polyketide synthase acyl carrier
species: Streptomyces rimosus [TaxId: 1927]

Probab=98.37  E-value=4.9e-08  Score=83.11  Aligned_cols=68  Identities=6%  Similarity=-0.085  Sum_probs=62.2

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      |.+.+++.++.++|- +++.+.+|..|. |+|+ |||.++||.++|++.+|+.+|++..|++||+..++.+
T Consensus         9 l~~~lre~~~~~~~~-~~~~i~~d~~f~-dlG~-DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~   76 (95)
T d1nq4a_           9 LLTLLRECAGEEESI-DLGGDVEDVAFD-ALGY-DSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEM   76 (95)
T ss_dssp             HHHHHHHHHTCSSTT-CSCSCCSSSCHH-HHTC-CSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHH
T ss_pred             HHHHHHHHHhHHhCC-ChhhcccCCCHH-HcCC-cHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHH
Confidence            667778888999996 677899999999 9999 9999999999999999999999999999999887765

>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.32  E-value=1.4e-07  Score=83.37  Aligned_cols=96  Identities=11%  Similarity=0.066  Sum_probs=72.2

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccccc-----C-
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSI-----N-  104 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~~-----~-  104 (829)
                      +...|++.++.+||. +++.|+++..|..|+|+ |||.++||.++|++.+|+.++.+..|++||...++.+..     . 
T Consensus         8 i~~~l~~iv~~~l~~-~~~~i~~~~~~~~dlG~-DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~~~~~~~   85 (115)
T d1klpa_           8 IIAGIAEIIEEVTGI-EPSEITPEKSFVDDLDI-DSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEENP   85 (115)
T ss_dssp             HHHHHHHHHHHHTCC-CTTTCCTTCCTTTTTCS-HHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHHCC-CccccCcccchhhhccc-chhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHHHhccCc
Confidence            444555667778988 57799999999867999 999999999999999999999999999999887765421     0 


Q ss_pred             ---CCcCccCCCCCCEEEEecccccCC
Q psy11396        105 ---NDDFDKSINNDDIAIIGISGQFPK  128 (829)
Q Consensus       105 ---~~~~~~~~~~~~IaItG~g~~~p~  128 (829)
                         ..........++.++.++-++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~r~~~  112 (115)
T d1klpa_          86 EAAQALRAKIESENPDAVANVQARLEA  112 (115)
T ss_dssp             TSCSSCCSCSSSCCTTCCCSCCCCCCC
T ss_pred             ccccccccccccCCcccccchhccccc
Confidence               011122334456677777776654

>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Bacillus subtilis [TaxId: 1423]

Probab=98.18  E-value=2.1e-07  Score=75.24  Aligned_cols=69  Identities=13%  Similarity=0.070  Sum_probs=60.5

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+-|+++++.+||.+ ++.|.++..|.+|+|+ |||.++||.++|+..+|+++|.+..++++|...++++
T Consensus         4 v~~~v~~iia~~l~~~-~~~i~~~~~~~~DlG~-DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~   72 (74)
T d1f80d_           4 TLERVTKIIVDRLGVD-EADVKLEASFKEDLGA-DXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNY   72 (74)
T ss_dssp             HHHHHHHHHHHHSSCC-SSCCCTTCBHHHHSCC-CHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHCcC-HHHcCCCccHHHhcCc-cHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHH
Confidence            4566788889999985 6789999999867999 9999999999999999999999999999998766543

>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Thermotoga maritima [TaxId: 2336]

Probab=98.11  E-value=6.2e-07  Score=74.54  Aligned_cols=69  Identities=14%  Similarity=0.084  Sum_probs=60.7

Q ss_pred             HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      .+.+.+.++++.+||.+ ++.|+++..|. ++|+ |||.++||.++|++.+|+.+|.+..|+++|...++.+
T Consensus         8 ~i~~~l~~iv~~~l~~~-~~~i~~~~~~~-dlG~-DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~   76 (85)
T d1vkua_           8 KLIAKFVEIASEKMGKD-LETVDEENTFK-ELGF-DSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDI   76 (85)
T ss_dssp             HHHHHHHHHHHHTTCCC-CCSCCTTSBTT-TTTC-CHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCC-HHHCCCCCCHH-HhcC-cchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHH
Confidence            35556677888999884 67899999998 9999 9999999999999999999999999999998776654

>d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Peptidyl carrier domain
domain: Peptidyl carrier protein (PCP), thioester domain
species: Bacillus brevis [TaxId: 1393]

Probab=98.11  E-value=6e-07  Score=72.77  Aligned_cols=66  Identities=3%  Similarity=0.008  Sum_probs=57.8

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL  101 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~  101 (829)
                      +.+.+.++.+.|||.   +.++++..|. |+|. |||++++|.++|++..|+.++.+..|++||...++.+
T Consensus         8 ~E~~l~~i~~~vL~~---~~i~~~~~f~-~lG~-dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~   73 (76)
T d2gdwa1           8 VESKLAEIWERVLGV---SGIGILDNFF-QIGG-HSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQY   73 (76)
T ss_dssp             HHHHHHHHHHHHTTS---SCCCTTTTSS-TTTC-TTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHH
T ss_pred             HHHHHHHHHHHHcCC---CCCCCCCCHH-HcCC-ChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHH
Confidence            344456667788997   4699999999 9999 9999999999999999999999999999999887754

>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: apo-D-alanyl carrier protein
domain: apo-D-alanyl carrier protein
species: Lactobacillus casei [TaxId: 1582]

Probab=97.99  E-value=2e-06  Score=70.33  Aligned_cols=70  Identities=10%  Similarity=-0.058  Sum_probs=58.7

Q ss_pred             HHHHHhhhHHhhhhccCCCCCCCcCCCcccccc-cccccccHHHHHHHHhhhcCccccCceec--ccccccccccc
Q psy11396         29 KSIKKNNSKIINDTISYDNSKKLKSKNLSINND-DFDKSINNDDIDKSIKKNNSKIINDTISY--DNSKKLKSKNL  101 (829)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gf~~sl~~~~l~~~l~~~~g~~l~~t~~f--d~pt~~a~~~~  101 (829)
                      ..+++-|...++.++|+ ++..+++|..|. ++ |+ |||+++||..+|++.+|+++|++-.+  +++|+..++.+
T Consensus         3 e~I~~~v~~il~~~l~~-~~~~i~~d~~l~-e~ggl-DSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~   75 (80)
T d1dv5a_           3 EAIKNGVLDILADLTGS-DDVKKNLDLNLF-ETGLL-DSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAK   75 (80)
T ss_dssp             HHHHHHHHHHHHHHHTS-SSTTTCSSCCSS-TTSSC-CSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcc-chhhcCCCcccc-ccCCC-CHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHH
Confidence            35667777788889998 466899999999 65 58 99999999999999999999999877  77888776554

>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Hypothetical protein Atu2571
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.80  E-value=2.6e-06  Score=70.27  Aligned_cols=68  Identities=6%  Similarity=-0.032  Sum_probs=56.7

Q ss_pred             HHhhhHHhhhhccCC-CCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecc--cccccccccc
Q psy11396         32 KKNNSKIINDTISYD-NSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYD--NSKKLKSKNL  101 (829)
Q Consensus        32 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd--~pt~~a~~~~  101 (829)
                      ++-++++++.+++.. +++.|+++..|. |+|+ |||.++||..+|++.+|+.+|.+..|.  +||...++.+
T Consensus         2 ~e~i~~il~~~~~l~~~~~~i~~~~~f~-dlG~-DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~   72 (83)
T d2jq4a1           2 NATIREILAKFGQLPTPVDTIADEADLY-AAGL-SSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDT   72 (83)
T ss_dssp             HHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTC-CHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHH
T ss_pred             HHHHHHHHHHHHccCCCHHHcCCCCCHH-HHhC-ccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHH
Confidence            455677777777764 678899999999 9999 999999999999999999999988774  4777666543

>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Acyl carrier protein-like
superfamily: ACP-like
family: Acyl-carrier protein (ACP)
domain: Acyl carrier protein
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=1.8e-05  Score=63.90  Aligned_cols=68  Identities=10%  Similarity=0.156  Sum_probs=57.7

Q ss_pred             HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396         31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN  100 (829)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~  100 (829)
                      +.+-|.++++.+||. +++.|.++..|.++||+ |||..+||..+|+..+|+++|....++.+|...+..
T Consensus         3 I~~~v~~iia~~l~i-~~~~i~~~~~l~~dLg~-DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~   70 (77)
T d1t8ka_           3 IEERVKKIIGEQLGV-KQEEVTNNASFVEDLGA-DSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAID   70 (77)
T ss_dssp             HHHHHHHHHHHHHTC-CGGGCCTTCBTTTTTCC-CHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHH
T ss_pred             HHHHHHHHHHHHHCC-CHHHcCCCCcchhcccc-chhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHH
Confidence            455667777888887 56789999999878999 999999999999999999999988888877765544

>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.75  E-value=0.00058  Score=65.12  Aligned_cols=89  Identities=13%  Similarity=0.016  Sum_probs=60.8

Q ss_pred             CCCCEEEEecccccchhhhhhhc--cccccccccceeccccccccccCCCcce--e----cc-----------ccc--cC
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLF--CDYTIFSEESVYQSPYMRYGFTPGAGST--L----IF-----------PQR--FG  707 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~--cD~~ia~~~a~f~~~e~~~Gl~p~~g~~--~----~l-----------~r~--iG  707 (829)
                      ++.|+...+.|.|.+.|..++++  ||.|++.++++|.+-....|..-.....  .    .+           ...  ..
T Consensus        81 ~~~~v~t~~~G~aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~~~~tg~~  160 (192)
T d1y7oa1          81 IKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQS  160 (192)
T ss_dssp             SSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cCcceEEEeccccCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            67889999999999999877654  7899999999999988876653211110  0    01           111  12


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      ..+..+.+-.-..++|+||+++||||+|+.
T Consensus       161 ~~~i~~~~~rd~~lsa~EAleyGliD~Ii~  190 (192)
T d1y7oa1         161 MEKVHADAERDNWMSAQETLEYGFIDEIMA  190 (192)
T ss_dssp             HHHHHHHHHSCCCBCHHHHHHHTSCSEECC
T ss_pred             HHHHHHhhcCCceecHHHHHHcCCCcEEec
Confidence            344555666667799999999999999985

>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.73  E-value=0.00044  Score=65.24  Aligned_cols=89  Identities=12%  Similarity=-0.063  Sum_probs=62.2

Q ss_pred             CCCCEEEEecccccchhhhhhhccc--cccccccceeccccccccccCCCcce----------------eccccc--cCH
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGST----------------LIFPQR--FGK  708 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~----------------~~l~r~--iG~  708 (829)
                      ++.|+...+.|.|.+.|..+++++|  .|++.++++|.+-....|.. +-..-                ..+.++  ...
T Consensus        70 ~~~~v~t~~~G~aaS~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~-G~~~~i~~~~~~l~~~~~~i~~i~a~~tg~~~  148 (179)
T d2cbya1          70 APCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVT-GSAADIAIQAEQFAVIKKEMFRLNAEFTGQPI  148 (179)
T ss_dssp             CSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred             hccceeeehhhhhhhHHHHHHHcCCCCceEECCchHhhcCCCchhcC-CccHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence            6789999999999999999999999  79999999999987765542 11110                001111  123


Q ss_pred             HHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        709 ILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       709 ~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      ....+.+-.-..++|+||+++||||+|+..
T Consensus       149 ~~i~~~~~~d~~l~a~EA~~~GliDeIi~~  178 (179)
T d2cbya1         149 ERIEADSDRDRWFTAAEALEYGFVDHIITR  178 (179)
T ss_dssp             HHHHHHHHTTCEEEHHHHHHHTSCSEECSC
T ss_pred             HHHHHhhcCCceecHHHHHHcCCCcEEecC
Confidence            344555666677999999999999999853

>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.00028  Score=66.91  Aligned_cols=87  Identities=14%  Similarity=-0.030  Sum_probs=62.4

Q ss_pred             CCCCEEEEecccccchhhhhhhccc--cccccccceeccccccccccCCCcceec------------------cccc--c
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGSTLI------------------FPQR--F  706 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~~~------------------l~r~--i  706 (829)
                      ++.|+...+.|.|.+.|..++++||  .|++.++++|.+-+...|..   |-..-                  +.+.  +
T Consensus        73 ~~~~v~tv~~G~aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~---G~~~~i~~~~~~~~~~~~~~~~~~~~~tg~  149 (183)
T d1yg6a1          73 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ---GQATDIEIHAREILKVKGRMNELMALHTGQ  149 (183)
T ss_dssp             SSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEE---EEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCEEEEEEEEeHHHHHHHHHcCCCCceeeCCCceEEecccccccc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence            6788999999999999999988888  69999999999887765532   11110                  1111  1


Q ss_pred             CHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        707 GKILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       707 G~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                      ......+.+-.-..++|+||+++||||+|+..
T Consensus       150 ~~e~i~~~~~~d~~lta~EAl~~GliD~Ii~~  181 (183)
T d1yg6a1         150 SLEQIERDTERDRFLSAPEAVEYGLVDSILTH  181 (183)
T ss_dssp             CHHHHHHHTSSCEEEEHHHHHHHTSSSEECCC
T ss_pred             CHHHHHHHhccCccccHHHHHHcCCCcEEecc
Confidence            23344454444455899999999999999853

>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.0016  Score=66.27  Aligned_cols=83  Identities=17%  Similarity=0.167  Sum_probs=64.5

Q ss_pred             ccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHH
Q psy11396        645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGK  724 (829)
Q Consensus       645 ~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~  724 (829)
                      .+..+..|+|+.|-|-+.|||......+|.+++.++++++.      +.|.++.+..+...--...+.+.    ..++++
T Consensus       184 ~~~~~~vP~i~vv~g~g~~gga~a~~~~d~v~m~~~a~~sv------ispEg~AsILwkd~~~a~eaAea----lklta~  253 (316)
T d2f9ya1         184 EMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRP  253 (316)
T ss_dssp             HHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHH
T ss_pred             HHHhCCCceEEEEEhhhhchhhhhhhhhhHHHHHhhhHHhh------ccchhhhhHhhccchhhcchHHH----HhhhhH
Confidence            34458999999999999999998888899999999999973      35666665555444333444443    458999


Q ss_pred             HHHHcCCcccccC
Q psy11396        725 ELKERGISMPVLP  737 (829)
Q Consensus       725 eA~~~GLv~~v~~  737 (829)
                      +.+++|+||+|+|
T Consensus       254 dL~~lgiIDeII~  266 (316)
T d2f9ya1         254 RLKELKLIDSIIP  266 (316)
T ss_dssp             HHHTTTSCSCCCC
T ss_pred             HHHHcCchhhccc
Confidence            9999999999996

>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.24  E-value=0.0019  Score=61.24  Aligned_cols=87  Identities=9%  Similarity=-0.158  Sum_probs=62.1

Q ss_pred             CCCCEEEEecccccchhhhhhhccc--cccccccceeccccccccccCCCccee------------------ccccccC-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGSTL------------------IFPQRFG-  707 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~~------------------~l~r~iG-  707 (829)
                      ++.|+...+.|.|.+.|..++++++  .|++.++++|.+.....|..   |-..                  .+.+.-| 
T Consensus        74 ~~~~v~tv~~G~aaS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~---G~~~di~~~~~~l~~~~~~~~~i~a~~tg~  150 (190)
T d2f6ia1          74 IKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAF---GHPQDIEIQTKEILYLKKLLYHYLSSFTNQ  150 (190)
T ss_dssp             SSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC-----------CHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hCCceEEEEeccccchhHHHHHhCCCCccccCCCcEEEEcccccccC---CcHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5778888899999999999988888  59999999999988876642   2111                  1111112 


Q ss_pred             -HHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396        708 -KILSREILFTASEFKGKELKERGISMPVLPR  738 (829)
Q Consensus       708 -~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~  738 (829)
                       .....+.+-.-..++|+||+++||||+|+..
T Consensus       151 ~~~~i~~~~~~d~~l~a~EAl~~GliD~Ii~~  182 (190)
T d2f6ia1         151 TVETIEKDSDRDYYMNALEAKQYGIIDEVIET  182 (190)
T ss_dssp             CHHHHHHHHHTTCEECHHHHHHHTSCSEECCC
T ss_pred             CHHHHHHhccCCeeecHHHHHHcCCCcEEccc
Confidence             2233344444556999999999999999853

>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=96.15  E-value=0.0012  Score=62.70  Aligned_cols=87  Identities=16%  Similarity=0.002  Sum_probs=62.3

Q ss_pred             CCCCEEEEecccccchhhhhhhccc--cccccccceeccccccccccCCCccee-----------------ccccc--cC
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQR--FG  707 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~--iG  707 (829)
                      ++.|+...+.|.|.+.|..+++++|  .|++.++++|.+-....|..  +-...                 .+...  ..
T Consensus        83 ~~~~V~tv~~G~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~--G~~~di~~~~~el~~~~~~i~~i~a~~Tg~~  160 (193)
T d1tg6a1          83 ILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR--GQATDIAIQAEEIMKLKKQLYNIYAKHTKQS  160 (193)
T ss_dssp             SCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             hcCceEEEEccchHHHHHHHhhcCccCccccCcccHHHhcCCccCCC--cCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            5668888899999999999999998  59999999999988765542  11110                 01111  12


Q ss_pred             HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396        708 KILSREILFTASEFKGKELKERGISMPVLP  737 (829)
Q Consensus       708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~  737 (829)
                      .....+.+-.-..++|+||+++||||+|+.
T Consensus       161 ~~~i~~~~~rD~~lta~EAl~yGliD~Ii~  190 (193)
T d1tg6a1         161 LQVIESAMERDRYMSPMEAQEFGILDKVLV  190 (193)
T ss_dssp             HHHHHHHHSSCEEECHHHHHHHTSCSEECS
T ss_pred             HHHHHHHhccCccCCHHHHHHcCCCCEEcc
Confidence            334445444445699999999999999984

>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S)
species: Propionibacterium freudenreichii [TaxId: 1744]

Probab=95.74  E-value=0.0065  Score=60.00  Aligned_cols=80  Identities=19%  Similarity=0.190  Sum_probs=54.9

Q ss_pred             CCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH----
Q psy11396        650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE----  725 (829)
Q Consensus       650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e----  725 (829)
                      ..|+|+++.|+|+||+.....+||++|+.+++.+++.-                    +.....  .+|+.++.+|    
T Consensus       161 ~vP~i~vv~Gp~~GG~a~~~~~~d~vi~~~~a~i~~aG--------------------P~vVe~--~~ge~~~~eelGga  218 (253)
T d1on3a1         161 VVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFITG--------------------PQVIKS--VTGEDVTADELGGA  218 (253)
T ss_dssp             TSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESSC--------------------HHHHHH--HHCCCCCHHHHHSH
T ss_pred             cceEEEEEecCcccceeeccchhhheeccccceEEecC--------------------cchhhh--hhCCcCChHhccCH
Confidence            48999999999999999888999999998766554422                    222221  2355555443    


Q ss_pred             ---HHHcCCcccccChhhHHHHHHHHHHHHhc
Q psy11396        726 ---LKERGISMPVLPRKQVLFYSLKLAKKLSL  754 (829)
Q Consensus       726 ---A~~~GLv~~v~~~~~l~~~~~~~a~~i~~  754 (829)
                         +.+.|++|.+++.++   .+.++++++.+
T Consensus       219 ~~h~~~sG~iD~v~~~e~---~a~~~~r~lls  247 (253)
T d1on3a1         219 EAHMAISGNIHFVAEDDD---AAELIAKKLLS  247 (253)
T ss_dssp             HHHHHTTCCCSEEESSHH---HHHHHHHHHHH
T ss_pred             HHhhhccccceEEECCHH---HHHHHHHHHHH
Confidence               346799999998763   34455555443

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.64  E-value=0.025  Score=50.86  Aligned_cols=99  Identities=14%  Similarity=0.196  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHH
Q psy11396        394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII  473 (829)
Q Consensus       394 ~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~  473 (829)
                      .+.++++++|+++|++++|||++.+|-.+     ..=.+++.+.++-   ..+....+ .-..+||+.+|+=.+.+..+ 
T Consensus        49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl---~~ek~~~~-~~~~~GNt~sasip~~L~~a-  118 (148)
T d1u6ea2          49 KMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQL---RPDAVVAN-DIEHTGNTSAASIPLAMAEL-  118 (148)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTC---CTTCEECC-THHHHCBCGGGHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCC---Cchhhhhh-hHHhhCCCccchHHHHHHHH-
Confidence            45678999999999999999999999443     3445666666652   12222222 23356999999866665554 


Q ss_pred             HHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       474 l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                        ++.+.+.|                                 ..+.++.+||.|=+-+++||+
T Consensus       119 --~~~g~i~~---------------------------------Gd~vll~gfG~G~s~~a~llr  147 (148)
T d1u6ea2         119 --LTTGAAKP---------------------------------GDLALLIGYGAGLSYAAQVVR  147 (148)
T ss_dssp             --HHHTSSCT---------------------------------TCEEEEEEEETTTEEEEEEEE
T ss_pred             --HHcCCCCC---------------------------------CCEEEEEEEchhhhheEEEEe
Confidence              44443321                                 246788899987777777775

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=95.24  E-value=0.035  Score=49.93  Aligned_cols=98  Identities=19%  Similarity=0.153  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHH
Q psy11396        395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL  474 (829)
Q Consensus       395 ~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l  474 (829)
                      +.++++++|+++|++++|||++.+|-.+.     .=.+.+.+.++-   ..+..+ .. -..+||+.+|+=.+.|..   
T Consensus        49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~~-----~~~~~i~~~lgi---~~~k~~-~~-~~~~Gn~~sasip~~L~~---  115 (149)
T d1ub7a2          49 MNTATLEAIEKAGLTPEDIRLFVPHQANL-----RIIDAARERLGL---PWERVA-VN-VDRYGNTSTASIPLALKE---  115 (149)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECCSCH-----HHHHHHHHTTTC---CGGGBC-CC-HHHHCBCGGGHHHHHHHH---
T ss_pred             HHHHHHHHHHhhccccccccEEEeeccch-----HHHHHHHhhccc---hhhHHH-HH-HHHhcCCcchhHHHHHHH---
Confidence            45789999999999999999999994432     233444444431   122222 22 234699999986555443   


Q ss_pred             HHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        475 SLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       475 ~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                      .++.+.+.|                                 ...+++.+||.|-+.+++||+-
T Consensus       116 ~~~~~~~~~---------------------------------Gd~vll~g~G~G~s~ga~llrw  146 (149)
T d1ub7a2         116 AVDAGRIRE---------------------------------GDHVLLVSFGAGLTWAAAVLTW  146 (149)
T ss_dssp             HHHHTSSCT---------------------------------TCEEEEEEEETTTEEEEEEEEC
T ss_pred             HHHcCCCCC---------------------------------CCEEEEEEEchHhhhEEEEEEE
Confidence            344443322                                 2467899999988888888874

>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.05  E-value=0.019  Score=56.70  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=54.7

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL-  726 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA-  726 (829)
                      -..|+|+++.|+|.||+......||++|+.+. +.+.+.                    |+...+.  .+|+.++.+|. 
T Consensus       160 ~~vP~I~~v~G~~~gG~a~~~~~~d~~vm~~~~a~i~~a--------------------GP~vV~~--~~ge~~~~eeLG  217 (258)
T d2a7sa1         160 GVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELG  217 (258)
T ss_dssp             TTSCEEEEECSCCBSGGGHHHHHSSEEEEEBTTBBCBSS--------------------CHHHHHH--HHCCCCCHHHHH
T ss_pred             CCCCEEEEEecCcccHHHHHHHhccceEeecCceEEEcc--------------------ChhHHHH--hcCCccChhhcc
Confidence            46899999999999999998888899887654 433321                    3333332  36777777653 


Q ss_pred             ------HHcCCcccccChh-hHHHHHHHHHH
Q psy11396        727 ------KERGISMPVLPRK-QVLFYSLKLAK  750 (829)
Q Consensus       727 ------~~~GLv~~v~~~~-~l~~~~~~~a~  750 (829)
                            .+.|++|.+++.+ +..+.+.+++.
T Consensus       218 ga~~h~~~sG~~D~v~~de~~a~~~~r~~Ls  248 (258)
T d2a7sa1         218 GAHTHMAKSGTAHYAASGEQDAFDYVRELLS  248 (258)
T ss_dssp             BHHHHHHTSCCCSEEESSHHHHHHHHHHHHH
T ss_pred             CHhHhhhhccccceEeCCHHHHHHHHHHHHH
Confidence                  5679999999744 44444444443

>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD
species: Escherichia coli [TaxId: 562]

Probab=94.93  E-value=0.011  Score=58.80  Aligned_cols=85  Identities=16%  Similarity=0.208  Sum_probs=57.3

Q ss_pred             CCCCEEEEecccccchhhh-hhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCcc-----C
Q psy11396        649 CKIPVIAAMQGHAIGAGWA-MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEF-----K  722 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~-lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~-----~  722 (829)
                      -..|+|+++.|+|.||+.. +++++|++++.+.+.+++...+                    ..+.  .+|+.+     +
T Consensus       168 ~~vP~I~v~~g~~~GG~aa~~~~~~d~i~~~~~s~i~~aGP~--------------------vve~--~~ge~~~e~~g~  225 (263)
T d2f9yb1         168 RGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPR--------------------VIEQ--TVREKLPPGFQR  225 (263)
T ss_dssp             TTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH--------------------HHHH--HHTSCCCTTTTB
T ss_pred             CCCceEEEecCCcchHHHhhhhhcCceEeeecceeeeccCHH--------------------HHhh--hcCCcCChhhcc
Confidence            5679999999999999874 7777888887777665553222                    1111  223333     4


Q ss_pred             HHHHHHcCCcccccChhhHHHHHHHHHHHHhcC
Q psy11396        723 GKELKERGISMPVLPRKQVLFYSLKLAKKLSLL  755 (829)
Q Consensus       723 a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~  755 (829)
                      ++...+.|+||.|+++++..++..++.+.|...
T Consensus       226 a~~~~~~G~iD~vv~~ee~~~~l~~~l~~L~~~  258 (263)
T d2f9yb1         226 SEFLIEKGAIDMIVRRPEMRLKLASILAKLMNL  258 (263)
T ss_dssp             HHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhCCCCCEEECCHHHHHHHHHHHHHHhhC
Confidence            445567899999999887766666666555443

>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Thermotoga maritima [TaxId: 2336]

Probab=94.77  E-value=0.017  Score=56.92  Aligned_cols=80  Identities=15%  Similarity=0.253  Sum_probs=55.4

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL-  726 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA-  726 (829)
                      -..|+|+++.|+|.||+.....+||++|+.++ +.+.+.                    |+.....  .+|+.++.++. 
T Consensus       157 ~~iP~I~vv~G~~~gG~a~~~~~~d~~im~~~~a~i~~a--------------------Gp~vv~~--~~ge~~~~eelG  214 (251)
T d1vrga1         157 GVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFIT--------------------GPNVIKA--VTGEEISQEDLG  214 (251)
T ss_dssp             TTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBSS--------------------CHHHHHH--HHCCCCCHHHHH
T ss_pred             CCCCEEEEEccCccccceehhhhCceEEEEccceeEEec--------------------Cchhhhh--hcCCcCChHHcc
Confidence            45899999999999999998889999988654 332211                    2223332  45788888775 


Q ss_pred             ------HHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        727 ------KERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       727 ------~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                            .+-|++|.+++.+   +++.+.++++.
T Consensus       215 ga~~h~~~sG~~D~v~~de---~~a~~~ir~lL  244 (251)
T d1vrga1         215 GAMVHNQKSGNAHFLADND---EKAMSLVRTLL  244 (251)
T ss_dssp             BHHHHHHTSCCCSEEESSH---HHHHHHHHHHH
T ss_pred             chhhhhhccccceEEECCH---HHHHHHHHHHH
Confidence                  4679999999765   33444455544

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=94.58  E-value=0.097  Score=46.48  Aligned_cols=98  Identities=9%  Similarity=0.137  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHH
Q psy11396        394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII  473 (829)
Q Consensus       394 ~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~  473 (829)
                      .+.++++++|+++|++++|||++..|-.+..     =.+++.+.++-   ....++.  .-..+||+.+|+=.+.+..+ 
T Consensus        45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~-----~~~~~~~~l~l---~~~k~~~--~~~~~GN~~sasip~~L~~~-  113 (143)
T d1hnja2          45 ELAHIVDETLAANNLDRSQLDWLVPHQANLR-----IISATAKKLGM---SMDNVVV--TLDRHGNTSAASVPCALDEA-  113 (143)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEECCSCHH-----HHHHHHHHTTC---CGGGBCC--CHHHHCBCGGGHHHHHHHHH-
T ss_pred             hhhHHHHHHHHHhhhcccccceEEeccCchH-----HHHHHHHhCcc---chhhhhh--hhhhhcccccchHHHHHHHH-
Confidence            3467899999999999999999999955432     34445555542   1222322  23456999999866555443 


Q ss_pred             HHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396        474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM  537 (829)
Q Consensus       474 l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~  537 (829)
                        ++.+.+-                                 +...++..+||.|=+.++++|+
T Consensus       114 --~~~~~~~---------------------------------~Gd~vll~g~G~G~s~g~~llr  142 (143)
T d1hnja2         114 --VRDGRIK---------------------------------PGQLVLLEAFGGGFTWGSALVR  142 (143)
T ss_dssp             --HHTTCSC---------------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred             --HHhCCCC---------------------------------CCCEEEEEEEehhhhhEEEEEE
Confidence              3443321                                 1246788899988777888775

>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Glutaconyl-CoA decarboxylase A subunit
species: Acidaminococcus fermentans [TaxId: 905]

Probab=94.33  E-value=0.021  Score=57.19  Aligned_cols=94  Identities=20%  Similarity=0.132  Sum_probs=57.0

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceeccccccc--cccCCCcceeccccccCHHHHHHH-HhcCCccCHHH
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY--GFTPGAGSTLIFPQRFGKILSREI-LFTASEFKGKE  725 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~--Gl~p~~g~~~~l~r~iG~~~a~e~-ll~g~~~~a~e  725 (829)
                      ...|+|++|.|+|.|||...+++||++++.+++.+.+.-..+  ++.+..        .+....+.++ ..+|+.++.++
T Consensus       179 ~~VP~Isvv~G~~~gGgAy~~~~~~~i~~~~~a~i~~~Gp~vv~~~~~~~--------~~~~~~~~ei~~~~ge~~~~ee  250 (287)
T d1pixa2         179 LGIPVIVGIYGTNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKG--------HVDLEYANEIADMVDRTGKTEP  250 (287)
T ss_dssp             TTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSS--------SCCHHHHHHHHHHHHTTCCCCC
T ss_pred             cCCCeEEEecCCccccceeccccceeEEecCCeEEEEECHHHhcccchhh--------hhhhhhHHHHHhhhcccccccc
Confidence            568999999999999998888877777778888766533221  222211        2222222222 22345544433


Q ss_pred             -------HHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396        726 -------LKERGISMPVLPRKQVLFYSLKLAKKLS  753 (829)
Q Consensus       726 -------A~~~GLv~~v~~~~~l~~~~~~~a~~i~  753 (829)
                             +..-|+++.+++.+   +++.+.++++.
T Consensus       251 LGGa~~H~~~sG~~d~v~~~e---~~ai~~~r~~l  282 (287)
T d1pixa2         251 PGAVDIHYTETGFMREVYASE---EGVLEGIKKYV  282 (287)
T ss_dssp             SSBHHHHTTTSCCSCEEESSH---HHHHHHHHHHH
T ss_pred             cccHHHhhhhcccceeecCCH---HHHHHHHHHHH
Confidence                   34569999999765   34444555544

>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.21  E-value=0.039  Score=54.41  Aligned_cols=80  Identities=19%  Similarity=0.247  Sum_probs=53.9

Q ss_pred             CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH-
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL-  726 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA-  726 (829)
                      -..|+|+++.|+|.||+.....+||++|+.+. +.+++.                    |++..+  ..+|+.++.+|+ 
T Consensus       159 ~~vP~I~vv~G~~~gG~a~~~~~~~~vim~~~~a~i~~a--------------------GP~vv~--~~~ge~i~~eelg  216 (258)
T d1xnya1         159 GVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK--TVTGEDVGFEELG  216 (258)
T ss_dssp             TTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH--HHHCCCCCHHHHH
T ss_pred             CCCCEEEEEcCCcChhHHHHHHhccchhhcccceEEEec--------------------CHHHHH--HHhcCccChHHhc
Confidence            45899999999999999988888888887653 433321                    222222  245777887774 


Q ss_pred             ------HHcCCcccccChh-hHHHHHHHHHH
Q psy11396        727 ------KERGISMPVLPRK-QVLFYSLKLAK  750 (829)
Q Consensus       727 ------~~~GLv~~v~~~~-~l~~~~~~~a~  750 (829)
                            ..-|++|.+++.+ +..+.+.++..
T Consensus       217 ga~~h~~~sG~~d~v~~de~ea~~~~r~~Ls  247 (258)
T d1xnya1         217 GARTHNSTSGVAHHMAGDEKDAVEYVKQLLS  247 (258)
T ss_dssp             BHHHHHHTSSCCSEEESSHHHHHHHHHHHHH
T ss_pred             cHHHHHhcCCeeEEEeCCHHHHHHHHHHHHH
Confidence                  4569999999754 34444444433

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=92.44  E-value=0.15  Score=45.50  Aligned_cols=102  Identities=10%  Similarity=0.068  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHH
Q psy11396        393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIK  471 (829)
Q Consensus       393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~  471 (829)
                      .....+++++|+++|++++|||++-+|-.+.     .=.+++.+.++-   ..+.++.+ .+-..+||+.+|+=...+  
T Consensus        43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~-----~i~~~i~~~Lgl---~~~k~~~s~~~l~~~GN~~sasi~~~L--  112 (148)
T d1u0ma2          43 EPLAPALKELAGEHGWDASDLDFYIVHAGGP-----RILDDLSTFLEV---DPHAFRFSRATLTEYGNIASAVVLDAL--  112 (148)
T ss_dssp             HHHHHHHHHHHHTTSCCSSCCSCCEEECSHH-----HHHHHHHHHSCS---CGGGGHHHHHHHHHTCBCTTHHHHHHH--
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEECCCCH-----HHHHHHHHHhCC---ChhhhhHHHHHHHhcCCCCcchHHHHH--
Confidence            4567889999999999999999999994332     334555555541   11222211 112346999999833333  


Q ss_pred             HHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396        472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME  538 (829)
Q Consensus       472 ~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e  538 (829)
                       ..+++++.+.|                                 ..+++..+||.|=+-.+++++.
T Consensus       113 -~~~~~~~~~~~---------------------------------Gd~ill~gfG~G~s~~~~llrW  145 (148)
T d1u0ma2         113 -RRLFDEGGVEE---------------------------------GARGLLAGFGPGITAEMSLGCW  145 (148)
T ss_dssp             -HHHHHSCCCCS---------------------------------SCCCEEEEEETTTEEEEEEEEE
T ss_pred             -HHHHHcCCCCC---------------------------------CCEEEEEEEchHhEeeEEEEEE
Confidence             23345544332                                 1246888999877777777775

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=91.89  E-value=0.41  Score=42.69  Aligned_cols=102  Identities=11%  Similarity=0.161  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHH
Q psy11396        393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~  472 (829)
                      ..+.++++++|+++|++++|||++.+|-.+     ..-.+++.+.++-   ..+.+ +...-..+|++.+||=.+.|.. 
T Consensus        48 ~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~-----~~~~~~v~~~lgi---~~ek~-~~~~~~~~GNt~Sasip~~L~~-  117 (153)
T d1mzja2          48 ADVVPAAREALEVAGLTVGDLVAFVPHQAN-----LRIIDVLVDRLGV---PEHVV-VSRDAEDTGNTSSASVALALDR-  117 (153)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTC---CTTSE-ECCTHHHHCBCTTHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHhCCCcccCCEEEEcCCc-----HHHHHHHHHHhCC---Cchhc-chhhhhhcCCcccchHHHHHHH-
Confidence            345678899999999999999999999444     3445566666652   12222 1222244699888863333322 


Q ss_pred             HHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396        473 ILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK  539 (829)
Q Consensus       473 ~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~  539 (829)
                        .++.+.+.|                                 ..+.++.+||.|=+.+..+|+..
T Consensus       118 --~~~~~~~~~---------------------------------Gd~ill~~fG~G~s~~~~~l~~~  149 (153)
T d1mzja2         118 --LVRSGAVPG---------------------------------GGPALMIGFGAGLSYAGQALLLP  149 (153)
T ss_dssp             --HHHHTSSCT---------------------------------TCEEEEEEEETTTEEEEEEEECC
T ss_pred             --HHHcCCCCC---------------------------------CCEEEEEEEchhhhhhEEEEEec
Confidence              344443322                                 23567789997656567777654

>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.48  E-value=0.13  Score=51.77  Aligned_cols=37  Identities=16%  Similarity=0.072  Sum_probs=32.5

Q ss_pred             CCCCEEEEecccccchhhhhhhccccccccccceecc
Q psy11396        649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS  685 (829)
Q Consensus       649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~  685 (829)
                      -..|+|++|.|+|+|+|..++..||++|+.+++.+.+
T Consensus       239 ~~iptis~v~G~~vG~gAyl~~L~d~vIm~~~s~i~l  275 (333)
T d1uyra1         239 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIIL  275 (333)
T ss_dssp             HHSCEEEEESSCEETHHHHHHHHTCCEEEETTCCEES
T ss_pred             CCCCEEEEEeCCccccceeecccccEEEEeCCceEEe
Confidence            3579999999999999999999999999998865543

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=82.96  E-value=1  Score=41.91  Aligned_cols=78  Identities=13%  Similarity=-0.017  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHH
Q psy11396        393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI  472 (829)
Q Consensus       393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~  472 (829)
                      ....+|+++||+++|++|+|||++.+. +.|...-|.=...+...++...        ...--.+.+..+++++.++-.+
T Consensus        77 ~la~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~~--------~~~~~~i~~~gC~g~~~al~~A  147 (200)
T d1u0ma1          77 SRVPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFDS--------TTRQIPIAQLGCAAGGAAINRA  147 (200)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCCT--------TCEEEEECSCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcCC--------CeeEeccccchhhHHHHHHHHH
Confidence            356789999999999999999999754 4454333332233333333100        0011122345566666666666


Q ss_pred             HHHHhcC
Q psy11396        473 ILSLKHK  479 (829)
Q Consensus       473 ~l~L~~~  479 (829)
                      .-.++.+
T Consensus       148 ~~~l~~~  154 (200)
T d1u0ma1         148 HDFCTAY  154 (200)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhC
Confidence            6666664

>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.24  E-value=0.7  Score=45.26  Aligned_cols=98  Identities=15%  Similarity=0.192  Sum_probs=57.8

Q ss_pred             cccCCCCEEEEecccccchhhhh----hhccccccccccceeccccccccccCCCcceeccccccC-------------H
Q psy11396        646 PLYCKIPVIAAMQGHAIGAGWAM----GLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG-------------K  708 (829)
Q Consensus       646 ~~~~~kp~Iaav~G~a~GgG~~l----al~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG-------------~  708 (829)
                      +..+..|.|..|-|.++|+|...    .+.+|++++.++++++.-...      ++....+.+.+.             .
T Consensus       139 ~a~~~vP~isvi~~~~~G~~~~am~~~~~~~d~~~AwP~A~igvMgpe------gaa~v~~~~~l~~~~~~~~~~~~~~~  212 (271)
T d2a7sa2         139 YGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGAS------GAVGFVYRQQLAEAAANGEDIDKLRL  212 (271)
T ss_dssp             HHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHH------HHHHHHTTTTTTGGGTSSCCTTSSTT
T ss_pred             HHhCCCCeEEEEeCCccchhhhhhcccccccceEEEecceeEeecCHH------HHHHHHHHHhhhhhhhcccchHHHHH
Confidence            34478899999999999987543    234677777777666553221      111111111111             1


Q ss_pred             HHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHH
Q psy11396        709 ILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKK  751 (829)
Q Consensus       709 ~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~  751 (829)
                      ....+  +.-+.-++..+.+.|++|.|+++.+..+......+.
T Consensus       213 ~~~~e--~~e~~~~p~~aa~~g~iD~VIdP~dTR~~L~~~L~~  253 (271)
T d2a7sa2         213 RLQQE--YEDTLVNPYVAAERGYVDAVIPPSHTRGYIGTALRL  253 (271)
T ss_dssp             HHHHH--HHTTTSBSHHHHHHTSSSEECCGGGHHHHHHHHHHH
T ss_pred             HHHHH--HHHHhcCHHHHHHcCCCCeeECHHHHHHHHHHHHHH
Confidence            11111  222334677889999999999999887665554443