Psyllid ID: psy11500

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
MPGEKYEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPADEEFAGLFHEVYKTNVNRHTLRGYVLTPDTSAQDETENLEQVE
cccHHHHHHHHHccccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHccccccEEccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccEEEEcccHHHHHHHccccccEEEEEEEccccEEEcccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccccccccHHHHHcccccccHHHHHHHcccccEEEEEcccHHcHHHHHHHHcccccccccEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHcc
cccHHHHHHHHHHHHHccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHcccccEEEEEEEcccEEEEEccHHHHHHHHHHHHHcccEEEEEEEEEcccccHcHHHHHHHHHHHHHccccccccccccccEEEEEcccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHcccccccEEEcccccccccHHHHHHHHHHHHHccccccHHHHcccccccccccccHHHccccccccccccccccccccccccccEEEEcEcccccccHHHcccEccEEEcccHHHHHHHHHHcccc
MPGEKYEVVISGvggvfpechsfHEFRELLfsgksgvtvdnrrwpiGLVDILFALgitpdgivghsvgelgcayadgcFTAEQMILAAHARgkasietdtiDGKMAAIGLGYKQMKDMladyptieiachnasdsctlsgpsaDVEALVESLVAQGIFARAVNVANIAyhsryiapAAPRLLQYLKkvipspkprsskwisssiledawgsplaqtssaeyhtnnllssvffeeasahipanaicIEIAPHGLLQAILKRSLAekevvnipltlrgvkDGVKFILNSIGKLYLngldlnlaplypevqypvsrgtkplghfvdwehgheyklsELEVQiksypadeefAGLFHEVYKTnvnrhtlrgyvltpdtsaqdetenleqve
MPGEKYEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVipspkprssKWISSSILEDAWGSPLAQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVnipltlrgvkdgVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPADEEFAGLFHEVYKTNVNRHTLRGyvltpdtsaqdetenleqve
MPGEKYEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPADEEFAGLFHEVYKTNVNRHTLRGYVLTPDTSAQDETENLEQVE
*****YEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVI*********WISSSILEDAWGSPLA***SAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPADEEFAGLFHEVYKTNVNRHTLRGYVLT****************
***EKYEVVISGVGGVFPECHSFHE************TVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASI*****DG*MAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKK************I*SSIL**********TSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYK****************FAGLFHEVYKTNVNRHTLRGYVLTPDTSAQDETENLEQVE
MPGEKYEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIP**********SSSILEDAWGSPLAQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPADEEFAGLFHEVYKTNVNRHTLRGYVLTPDT*************
*PGEKYEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGH*************YPADEEFAGLFHEVYKTNVNRHTLRGYVLTPDTSAQDETENL****
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MPGEKYEVVISGVGGVFPECHSFHEFRELLFSGKSGVTVDNRRWPIGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPADEEFAGLFHEVYKTNVNRHTLRGYVLTPDTSAQDETENLEQVE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
P49327 2511 Fatty acid synthase OS=Ho yes N/A 0.816 0.125 0.429 2e-73
P12785 2505 Fatty acid synthase OS=Ra yes N/A 0.733 0.113 0.452 4e-73
Q71SP7 2513 Fatty acid synthase OS=Bo yes N/A 0.816 0.125 0.400 7e-71
P19096 2504 Fatty acid synthase OS=Mu yes N/A 0.733 0.113 0.445 7e-71
P12276 2512 Fatty acid synthase OS=Ga yes N/A 0.744 0.114 0.453 8e-70
Q4WAZ9 4007 Nonribosomal peptide synt no N/A 0.715 0.069 0.305 2e-16
Q7TXL7 1827 Phthiocerol/phenolphthioc yes N/A 0.527 0.111 0.298 2e-15
P96203 1827 Phthiocerol synthesis pol yes N/A 0.532 0.112 0.296 2e-15
Q558Y6 2998 Probable polyketide synth yes N/A 0.620 0.080 0.280 3e-15
Q0C8M3 3038 Lovastatin nonaketide syn N/A N/A 0.537 0.068 0.321 3e-13
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 Back     alignment and function desciption
 Score =  276 bits (706), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 147/342 (42%), Positives = 207/342 (60%), Gaps = 26/342 (7%)

Query: 46  IGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKM 105
           IGL+D+L  +G+ PDGIVGHS+GE+ C YADGC + E+ +LAA+ RG+   E     G M
Sbjct: 561 IGLIDLLSCMGLRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPPGAM 620

Query: 106 AAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVA 165
           AA+GL +++ K      P +  ACHN+ D+ T+SGP A V   VE L  +G+FA+ V   
Sbjct: 621 AAVGLSWEECKQRCP--PGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTG 678

Query: 166 NIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNN 225
            +A+HS ++   AP LLQ LKKVI  PKPRS++W+S+SI E  W S LA+TSSAEY+ NN
Sbjct: 679 GMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNN 738

Query: 226 LLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFIL 285
           L+S V F+EA  H+P +A+ +EIAPH LLQA+LKR L     + IPL  +  +D ++F L
Sbjct: 739 LVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKPSCTI-IPLMKKDHRDNLEFFL 797

Query: 286 NSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPAD 345
             IG+L+L+G+D N   L+P V++P  RGT  +   + W+H   + +          PA 
Sbjct: 798 AGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSLAWDV----------PAA 847

Query: 346 EEF----AGLFHEVYKTNVNR---------HTLRGYVLTPDT 374
           E+F          +Y  + +          HTL G VL P T
Sbjct: 848 EDFPNGSGSPSAAIYNIDTSSESPDHYLVDHTLDGRVLFPAT 889
Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 1EC: 4
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 Back     alignment and function description
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1 Back     alignment and function description
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2 Back     alignment and function description
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 Back     alignment and function description
>sp|Q4WAZ9|NRP14_ASPFU Nonribosomal peptide synthetase 14 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=NRPS14 PE=2 SV=2 Back     alignment and function description
>sp|Q7TXL7|PPSD_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsD PE=3 SV=1 Back     alignment and function description
>sp|P96203|PPSD_MYCTU Phthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium tuberculosis GN=ppsD PE=3 SV=1 Back     alignment and function description
>sp|Q558Y6|PKS14_DICDI Probable polyketide synthase 14 OS=Dictyostelium discoideum GN=pks14 PE=3 SV=2 Back     alignment and function description
>sp|Q0C8M3|LNKS_ASPTN Lovastatin nonaketide synthase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=lovB PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
328703183 2215 PREDICTED: fatty acid synthase-like [Acy 0.832 0.145 0.595 1e-107
170044457 2386 fatty acid synthase S-acetyl transferase 0.842 0.136 0.542 1e-100
91078002 2153 PREDICTED: similar to p270 [Tribolium ca 0.839 0.150 0.567 4e-99
157118100 2385 fatty acid synthase [Aedes aegypti] gi|1 0.842 0.136 0.536 6e-99
383856217 2420 PREDICTED: fatty acid synthase-like [Meg 0.819 0.130 0.541 5e-97
328776933 2394 PREDICTED: fatty acid synthase-like isof 0.793 0.128 0.557 4e-96
242005736 2175 fatty acid synthase, putative [Pediculus 0.728 0.129 0.604 4e-96
357631736 2420 p270 [Danaus plexippus] 0.754 0.120 0.593 4e-96
156549724 3088 PREDICTED: fatty acid synthase-like [Nas 0.754 0.094 0.6 5e-96
350407733 2418 PREDICTED: fatty acid synthase-like [Bom 0.819 0.131 0.544 6e-96
>gi|328703183|ref|XP_001944653.2| PREDICTED: fatty acid synthase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/329 (59%), Positives = 240/329 (72%), Gaps = 7/329 (2%)

Query: 46  IGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKM 105
           IGL+D+L ++ I PDGI+GHSVGELGCAYADGCFTAEQMILAAHARG+ASIET+ +DG M
Sbjct: 572 IGLLDVLKSIDIVPDGIIGHSVGELGCAYADGCFTAEQMILAAHARGRASIETELVDGSM 631

Query: 106 AAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVA 165
           AAIGLGY  +KD L     IE+ACHNASDS TLSGP+A V + VE L ++G+FA+ VNV+
Sbjct: 632 AAIGLGYNDIKDRLPH--DIEVACHNASDSSTLSGPTASVSSFVEQLKSEGVFAKLVNVS 689

Query: 166 NIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNN 225
           NIAYHS+YI PAAP LL+YLK+VIP PKPRSSKW+SSS+ E  WG+ +A+ SS EYHTNN
Sbjct: 690 NIAYHSQYIKPAAPTLLKYLKEVIPEPKPRSSKWVSSSVPESEWGNEVAKYSSPEYHTNN 749

Query: 226 LLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFIL 285
           LL  V FEEAS HIP +AI IEIAPHGLLQAILKRSL EK V NIPLT R  KD VKF+L
Sbjct: 750 LLGQVLFEEASRHIPEDAIVIEIAPHGLLQAILKRSLPEK-VTNIPLTHRSTKDSVKFLL 808

Query: 286 NSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPAD 345
           ++ GK+Y NG+  N+   YP + YPVSR T+ L     W+H  ++ +  L         +
Sbjct: 809 SAFGKMYNNGMTPNIEAFYPSINYPVSRQTQALHSIFPWDHKEDWAIKSLSQTSSRVSGE 868

Query: 346 EEFAGLF---HEVYKTNVN-RHTLRGYVL 370
            +F       H ++   +N RH L   +L
Sbjct: 869 RQFTIHLNNEHILFDYKINGRHILPSSIL 897

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|170044457|ref|XP_001849863.1| fatty acid synthase S-acetyl transferase [Culex quinquefasciatus] gi|167867603|gb|EDS30986.1| fatty acid synthase S-acetyl transferase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|91078002|ref|XP_969531.1| PREDICTED: similar to p270 [Tribolium castaneum] gi|270001419|gb|EEZ97866.1| hypothetical protein TcasGA2_TC000238 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157118100|ref|XP_001659008.1| fatty acid synthase [Aedes aegypti] gi|108875860|gb|EAT40085.1| AAEL008160-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|383856217|ref|XP_003703606.1| PREDICTED: fatty acid synthase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328776933|ref|XP_395426.4| PREDICTED: fatty acid synthase-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|242005736|ref|XP_002423718.1| fatty acid synthase, putative [Pediculus humanus corporis] gi|212506903|gb|EEB10980.1| fatty acid synthase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|357631736|gb|EHJ79205.1| p270 [Danaus plexippus] Back     alignment and taxonomy information
>gi|156549724|ref|XP_001605685.1| PREDICTED: fatty acid synthase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350407733|ref|XP_003488176.1| PREDICTED: fatty acid synthase-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
FB|FBgn0027571 2544 CG3523 [Drosophila melanogaste 0.832 0.126 0.480 5.4e-82
FB|FBgn0040001 2394 CG17374 [Drosophila melanogast 0.837 0.135 0.484 9.8e-82
UNIPROTKB|P49327 2511 FASN "Fatty acid synthase" [Ho 0.832 0.128 0.431 2.3e-73
RGD|620665 2505 Fasn "fatty acid synthase" [Ra 0.744 0.114 0.450 4.7e-73
UNIPROTKB|P12785 2505 Fasn "Fatty acid synthase" [Ra 0.744 0.114 0.450 4.7e-73
ZFIN|ZDB-GENE-030131-7802 2514 fasn "fatty acid synthase" [Da 0.739 0.113 0.470 4.8e-73
UNIPROTKB|I3LC73 1375 FASN "Uncharacterized protein" 0.816 0.229 0.406 3.3e-72
MGI|MGI:95485 2504 Fasn "fatty acid synthase" [Mu 0.744 0.115 0.443 4.9e-71
UNIPROTKB|F1N647 2512 FASN "Fatty acid synthase" [Bo 0.816 0.125 0.409 8e-71
UNIPROTKB|Q71SP7 2513 FASN "Fatty acid synthase" [Bo 0.816 0.125 0.409 8.1e-71
FB|FBgn0027571 CG3523 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 775 (277.9 bits), Expect = 5.4e-82, Sum P(3) = 5.4e-82
 Identities = 159/331 (48%), Positives = 218/331 (65%)

Query:    46 IGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKM 105
             + L D+L +LGI PDGIVGHSVGELGCAYADGCFT EQ +LAA+ RGK+ ++T    GKM
Sbjct:   705 VALTDLLSSLGIHPDGIVGHSVGELGCAYADGCFTPEQTVLAAYWRGKSILDTQLAKGKM 764

Query:   106 AAIGLGYKQMKDML-AD-YPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVN 163
             AA+GL ++     + +D +P     CHN+ D+CT+SGP A +EALV  L A+G+FA+AVN
Sbjct:   765 AAVGLSWEDAHSRVPSDCFPV----CHNSEDNCTISGPEASIEALVAKLNAEGVFAKAVN 820

Query:   164 VANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHT 223
              +  A+HS+YIA A P+L + L+K+IP+ K R+++WIS+SI E AW +P+A+ SSA YH 
Sbjct:   821 SSGYAFHSKYIAEAGPKLRKSLEKIIPNAKNRTARWISTSIPESAWNTPVAKQSSAAYHV 880

Query:   224 NNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKF 283
             NNLLS V F EA  H+P NAI +EIAPHGLLQAILKR+L   +  N+ L  RG ++ V+F
Sbjct:   881 NNLLSPVLFHEALQHVPKNAISVEIAPHGLLQAILKRALGP-DATNLSLVKRGHENNVEF 939

Query:   284 ILNSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYP 343
              L ++GKL+  G    +  L   + YPV RGT  L   V W+H  ++ +++   +  S  
Sbjct:   940 FLTNVGKLFAAGAQPQVLTLVRPISYPVGRGTPMLNSKVGWDHTQKWLVAKFGKETSSGE 999

Query:   344 ADEEFAGLFHEVYKTNVNRHTLRGYVLTPDT 374
                E   L  E     +  HT+ G +L P T
Sbjct:  1000 TIVE-VDLSKED-DAFLAGHTIDGRILFPAT 1028
GO:0004312 "fatty acid synthase activity" evidence=ISS
GO:0016295 "myristoyl-[acyl-carrier-protein
GO:0009058 "biosynthetic process" evidence=IEA
GO:0004314 "[acyl-carrier-protein
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0004313 "[acyl-carrier-protein
GO:0004316 "3-oxoacyl-[acyl-carrier-protein
GO:0016296 "palmitoyl-[acyl-carrier-protein
GO:0004320 "oleoyl-[acyl-carrier-protein
GO:0004317 "3-hydroxypalmitoyl-[acyl-carrier-protein
GO:0004319 "enoyl-[acyl-carrier-protein
GO:0004315 "3-oxoacyl-[acyl-carrier-protein
GO:0000166 "nucleotide binding" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
FB|FBgn0040001 CG17374 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P49327 FASN "Fatty acid synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|620665 Fasn "fatty acid synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P12785 Fasn "Fatty acid synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7802 fasn "fatty acid synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|I3LC73 FASN "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:95485 Fasn "fatty acid synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1N647 FASN "Fatty acid synthase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q71SP7 FASN "Fatty acid synthase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!
3rd Layer2.3.1.39LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
smart00827298 smart00827, PKS_AT, Acyl transferase domain in pol 6e-48
pfam00698319 pfam00698, Acyl_transf_1, Acyl transferase domain 2e-47
COG3321 1061 COG3321, COG3321, Polyketide synthase modules and 5e-21
COG0331310 COG0331, FabD, (acyl-carrier-protein) S-malonyltra 5e-12
TIGR00128290 TIGR00128, fabD, malonyl CoA-acyl carrier protein 4e-11
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 4e-10
TIGR03131295 TIGR03131, malonate_mdcH, malonate decarboxylase, 6e-08
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information 
 Score =  164 bits (418), Expect = 6e-48
 Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 11/234 (4%)

Query: 46  IGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKM 105
           + L  +L + G+ PD +VGHS GE+  AY  G  + E       ARG+         G M
Sbjct: 70  VALARLLRSWGVRPDAVVGHSSGEIAAAYVAGVLSLEDAARLVAARGRLMQALPG-GGAM 128

Query: 106 AAIGLGYKQMKDMLADYP-TIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNV 164
            A+GL  ++++ +LA  P  + +A  N+  S  LSG    V+ L   L A+GIFAR + V
Sbjct: 129 LAVGLSEEEVEPLLAGVPDRVSVAAVNSPSSVVLSGDEDAVDELAARLEAEGIFARRLKV 188

Query: 165 ANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTN 224
            + A+HS ++ P        L  +  +P+P    ++S+  +        A+   A+Y   
Sbjct: 189 -DHAFHSPHMEPILDEFRAALAGL--TPRPPRIPFVST--VTGTLIDG-AELDDADYWVR 242

Query: 225 NLLSSVFFEEASAHIPANA---ICIEIAPHGLLQAILKRSLAEKEVVNIPLTLR 275
           NL   V F +A   + A     + +E+ PH +L   +K++LA      +  +LR
Sbjct: 243 NLREPVRFADAVRALLAEGGVTVFLEVGPHPVLTGPIKQTLAAAGSAVVLPSLR 296

Length = 298
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
PF00698318 Acyl_transf_1: Acyl transferase domain; InterPro: 100.0
KOG1202|consensus 2376 100.0
TIGR02816538 pfaB_fam PfaB family protein. The protein PfaB is 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
TIGR03131295 malonate_mdcH malonate decarboxylase, epsilon subu 100.0
TIGR00128290 fabD malonyl CoA-acyl carrier protein transacylase 100.0
COG3321 1061 Polyketide synthase modules and related proteins [ 100.0
smart00827298 PKS_AT Acyl transferase domain in polyketide synth 100.0
PLN02752343 [acyl-carrier protein] S-malonyltransferase 100.0
COG0331310 FabD (acyl-carrier-protein) S-malonyltransferase [ 100.0
KOG2926|consensus386 100.0
smart00826 167 PKS_DH PKS_DH. 95.91
cd07198172 Patatin Patatin-like phospholipase. Patatin is a s 94.54
cd07229391 Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly 94.01
PRK10279300 hypothetical protein; Provisional 93.43
cd07205175 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi 92.97
cd07207194 Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho 92.7
cd07209215 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim 92.56
COG1752306 RssA Predicted esterase of the alpha-beta hydrolas 92.24
cd07210221 Pat_hypo_W_succinogenes_WS1459_like Hypothetical p 91.8
cd07227269 Pat_Fungal_NTE1 Fungal patatin-like phospholipase 91.33
cd07225306 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai 91.0
cd07228175 Pat_NTE_like_bacteria Bacterial patatin-like phosp 90.84
cd07224233 Pat_like Patatin-like phospholipase. Patatin-like 87.64
cd07206298 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 87.29
cd07218245 Pat_iPLA2 Calcium-independent phospholipase A2; Cl 86.24
cd07231323 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar 86.01
PRK11126242 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl 84.71
cd07204243 Pat_PNPLA_like Patatin-like phospholipase domain c 84.49
cd07208266 Pat_hypo_Ecoli_yjju_like Hypothetical patatin simi 83.62
cd07230421 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TG 83.34
cd07221252 Pat_PNPLA3 Patatin-like phospholipase domain conta 82.88
cd07232407 Pat_PLPL Patain-like phospholipase. Patatin-like p 82.51
cd07220249 Pat_PNPLA2 Patatin-like phospholipase domain conta 82.37
TIGR03056278 bchO_mg_che_rel putative magnesium chelatase acces 81.2
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information 
Probab=100.00  E-value=3.1e-61  Score=463.17  Aligned_cols=281  Identities=29%  Similarity=0.404  Sum_probs=243.3

Q ss_pred             EEEEcCCCcCcccCc------------------------CCchhHHhhcCCCC--------cchhHHHHHHHHHHHHHHH
Q psy11500          7 EVVISGVGGVFPECH------------------------SFHEFRELLFSGKS--------GVTVDNRRWPIGLVDILFA   54 (387)
Q Consensus         7 ~f~F~GqGsq~~~m~------------------------~~~~l~~~l~~~~~--------~~q~ai~a~q~al~~ll~~   54 (387)
                      +|||||||+||++|.                        ...++.+.+++++.        ..||+||++|+|++++|++
T Consensus         1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~   80 (318)
T PF00698_consen    1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS   80 (318)
T ss_dssp             EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence            699999999999991                        13456666666553        1399999999999999999


Q ss_pred             cCCCCCEEEecChhHHHHHHHhCcCCHHHHHHHHHHHHHHhcccCCCCceEEEEeCCHHHHHHhhcCCCCEEEEEeeCCC
Q psy11500         55 LGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASD  134 (387)
Q Consensus        55 ~Gi~P~~v~GHS~GE~aAa~~aG~ls~eda~~lv~~Rg~~~~~~~~~~g~M~av~~~~~~~~~~l~~~~~v~iA~~Nsp~  134 (387)
                      +||+||+++|||+|||+|+|+||++|++||+++++.|+++|.+.. ..|+|++|..  ++.+..+...++++|||+|+|+
T Consensus        81 ~Gi~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~-~~g~m~av~~--~~~~~~~~~~~~v~ia~~Ns~~  157 (318)
T PF00698_consen   81 WGIKPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA-PPGAMLAVRG--EEEEEKLALPPDVEIANINSPR  157 (318)
T ss_dssp             TTHCESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS-TSEEEEEEES--HHHHHHHHTTTTEEEEEEEETT
T ss_pred             cccccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh-hcccccchhh--hHHhhhccccccceeeeecccc
Confidence            999999999999999999999999999999999999999998754 8899999988  3333344455689999999999


Q ss_pred             cEEEeCCHHHHHHHHHHHHhCCceEEEcccCCcCCcccchhhHHHHHHHHHhhcCCCCCCCCceEEecccccccCCCCcc
Q psy11500        135 SCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLA  214 (387)
Q Consensus       135 ~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHS~~m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~g~~~~~~~~~  214 (387)
                      ++||||+.++|+++.+.|+++|+++++|++ ++|||||+|+++.++|++.++.+.+.+  |++|++|+++|...    ..
T Consensus       158 q~visG~~~~l~~~~~~l~~~~~~~~~l~v-~~afHs~~m~~~~~~~~~~l~~~~~~~--p~ip~~S~~~g~~~----~~  230 (318)
T PF00698_consen  158 QVVISGEREALEALVERLKAEGIKAKRLPV-SYAFHSPLMEPAADEFREALESIEFRP--PKIPVYSNVTGRPY----DD  230 (318)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHTTSEEEEESS-SSETTSGGGHHHHHHHHHHHHTSCSCC--CSSEEEETTTSSBE----HS
T ss_pred             ccccCCCHHHHHHHHHHhhccceeEEEeee-eccccCchhhhhHHHHHhhhhcccccc--ccccceeecccccc----cc
Confidence            999999999999999999999999999999 999999999999999999999988776  89999999998764    12


Q ss_pred             CCCCHHHHHHhcccceehHHHHhhccCCC--eEEEECCChhHHHHHHHHhC---CCCceeeecccCCCCChHHHHHHHHH
Q psy11500        215 QTSSAEYHTNNLLSSVFFEEASAHIPANA--ICIEIAPHGLLQAILKRSLA---EKEVVNIPLTLRGVKDGVKFILNSIG  289 (387)
Q Consensus       215 ~~~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~vEiGP~~~L~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~l~~~l~  289 (387)
                      ...+++||++|+++||+|.++++.+.+.+  +||||||+++|+++++++++   .....+++++.|+ .++..+++++++
T Consensus       231 ~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fiEiGP~~~L~~~~~~~l~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~  309 (318)
T PF00698_consen  231 PELIAEYWARQLRSPVRFREAVEALYEDGVRVFIEIGPGSVLTSLVKRILKSENGSDATLIPSLRRG-HDDLDTFLQALA  309 (318)
T ss_dssp             HHHHHHHHHHHHHSHEEHHHHHHHHHHTTEEEEEEESSSSHHHHHHHHHSTSETTTTSEEEESEBTT-BSCHHHHHHHHH
T ss_pred             cccchhHHHhccCCcCChHHHHHHHHhcCCCEEEEeCchHHHHHHHHHHHhhccCCCeEEEeccCCC-CChHHHHHHHHH
Confidence            22358999999999999999999997765  69999999999999999998   3467889999886 788999999999


Q ss_pred             HHHHcCCCC
Q psy11500        290 KLYLNGLDL  298 (387)
Q Consensus       290 ~L~~~G~~v  298 (387)
                      +||++|++|
T Consensus       310 ~l~~~Gv~~  318 (318)
T PF00698_consen  310 QLFVSGVAV  318 (318)
T ss_dssp             HHHHTT-HH
T ss_pred             HHHHcCCCC
Confidence            999999753

3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
>KOG1202|consensus Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG2926|consensus Back     alignment and domain information
>smart00826 PKS_DH PKS_DH Back     alignment and domain information
>cd07198 Patatin Patatin-like phospholipase Back     alignment and domain information
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3 Back     alignment and domain information
>PRK10279 hypothetical protein; Provisional Back     alignment and domain information
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 Back     alignment and domain information
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 Back     alignment and domain information
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli Back     alignment and domain information
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes Back     alignment and domain information
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 Back     alignment and domain information
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07224 Pat_like Patatin-like phospholipase Back     alignment and domain information
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase Back     alignment and domain information
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2 Back     alignment and domain information
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase Back     alignment and domain information
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional Back     alignment and domain information
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family Back     alignment and domain information
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli Back     alignment and domain information
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5 Back     alignment and domain information
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3 Back     alignment and domain information
>cd07232 Pat_PLPL Patain-like phospholipase Back     alignment and domain information
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2 Back     alignment and domain information
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
3hhd_A965 Structure Of The Human Fatty Acid Synthase Ks-Mat D 2e-74
2vz8_A 2512 Crystal Structure Of Mammalian Fatty Acid Synthase 4e-72
2jfk_A433 Structure Of The Mat Domain Of Human Fas With Malon 1e-70
2jfd_A425 Structure Of The Mat Domain Of Human Fas Length = 4 4e-70
3tzw_A491 Crystal Structure Of A Fragment Containing The Acyl 2e-12
2hg4_A917 Structure Of The Ketosynthase-acyltransferase Didom 5e-11
2qo3_A915 Crystal Structure Of [ks3][at3] Didomain From Modul 2e-10
4amo_A421 Crystal Structure Of The Acyltransferase Domain Of 7e-07
3rgi_A286 Trans-Acting Transferase From Disorazole Synthase L 8e-07
3sbm_A281 Trans-Acting Transferase From Disorazole Synthase I 9e-07
4amn_A421 Crystal Structure Of The Acyltransferase Domain Of 2e-06
2cuy_A305 Crystal Structure Of Malonyl Coa-acyl Carrier Prote 3e-06
4amm_A401 Crystal Structure Of The Acyltransferase Domain Of 3e-06
3g87_A394 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 6e-06
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 Back     alignment and structure 
Iteration: 1

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 147/342 (42%), Positives = 207/342 (60%), Gaps = 26/342 (7%)
Query: 46  IGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKM 105
           IGL+D+L  +G+ PDGIVGHS+GE+ C YADGC + E+ +LAA+ RG+   E     G M
Sbjct: 563 IGLIDLLSCMGLRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPPGAM 622
Query: 106 AAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVA 165
           AA+GL +++ K      P +  ACHN+ D+ T+SGP A V   VE L  +G+FA+ V   
Sbjct: 623 AAVGLSWEECKQRCP--PGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTG 680
Query: 166 NIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNN 225
            +A+HS ++   AP LLQ LKKVI  PKPRS++W+S+SI E  W S LA+TSSAEY+ NN
Sbjct: 681 GMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNN 740
Query: 226 LLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFIL 285
           L+S V F+EA  H+P +A+ +EIAPH LLQA+LKR L     + IPL  +  +D ++F L
Sbjct: 741 LVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKPSCTI-IPLMKKDHRDNLEFFL 799
Query: 286 NSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYPAD 345
             IG+L+L+G+D N   L+P V++P  RGT  +   + W+H   + +          PA 
Sbjct: 800 AGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSLAWDV----------PAA 849
Query: 346 EEF----AGLFHEVYKTNVNR---------HTLRGYVLTPDT 374
           E+F          +Y  + +          HTL G VL P T
Sbjct: 850 EDFPNGSGSPSAAIYNIDTSSESPDHYLVDHTLDGRVLFPAT 891
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 Back     alignment and structure
>pdb|2JFK|A Chain A, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa Length = 433 Back     alignment and structure
>pdb|2JFD|A Chain A, Structure Of The Mat Domain Of Human Fas Length = 425 Back     alignment and structure
>pdb|3TZW|A Chain A, Crystal Structure Of A Fragment Containing The Acyltransferase Domain Of Pks13 From Mycobacterium Tuberculosis In The Orthorhombic Apoform At 2.6 A Length = 491 Back     alignment and structure
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 Back     alignment and structure
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 Back     alignment and structure
>pdb|4AMO|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|3RGI|A Chain A, Trans-Acting Transferase From Disorazole Synthase Length = 286 Back     alignment and structure
>pdb|3SBM|A Chain A, Trans-Acting Transferase From Disorazole Synthase In Complex With Acetate Length = 281 Back     alignment and structure
>pdb|4AMN|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|2CUY|A Chain A, Crystal Structure Of Malonyl Coa-acyl Carrier Protein Transacylase From Thermus Thermophilus Hb8 Length = 305 Back     alignment and structure
>pdb|4AMM|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 401 Back     alignment and structure
>pdb|3G87|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Burkholderia Pseudomallei Using Dried Seaweed As Nucleant Or Protease Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 6e-99
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 1e-04
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 5e-95
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 6e-06
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 5e-30
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 5e-28
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 6e-28
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 1e-11
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 3e-11
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 2e-10
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 2e-09
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 3e-09
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 4e-09
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 9e-09
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 2e-07
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 2e-07
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 7e-07
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 8e-07
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 1e-06
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 1e-06
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 2e-06
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 4e-06
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 3e-05
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 9e-04
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 5e-05
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 2e-04
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
 Score =  314 bits (806), Expect = 6e-99
 Identities = 134/283 (47%), Positives = 187/283 (66%), Gaps = 3/283 (1%)

Query: 46  IGLVDILFALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKM 105
           IGL+D+L  +G+ PDGIVGHS+GE+ C YADGC + E+ +LAA+ RG+   E     G M
Sbjct: 563 IGLIDLLSCMGLRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPPGAM 622

Query: 106 AAIGLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFARAVNVA 165
           AA+GL +++ K      P +  ACHN+ D+ T+SGP A V   VE L  +G+FA+ V   
Sbjct: 623 AAVGLSWEECKQRCP--PGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTG 680

Query: 166 NIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQTSSAEYHTNN 225
            +A+HS ++   AP LLQ LKKVI  PKPRS++W+S+SI E  W S LA+TSSAEY+ NN
Sbjct: 681 GMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNN 740

Query: 226 LLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFIL 285
           L+S V F+EA  H+P +A+ +EIAPH LLQA+LKR L       IPL  +  +D ++F L
Sbjct: 741 LVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKP-SCTIIPLMKKDHRDNLEFFL 799

Query: 286 NSIGKLYLNGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGH 328
             IG+L+L+G+D N   L+P V++P  RGT  +   + W+H  
Sbjct: 800 AGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSL 842
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394 Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281 Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303 Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305 Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321 Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336 Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317 Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307 Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316 Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318 Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316 Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318 Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314 Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339 Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
3hhd_A965 Fatty acid synthase; transferase, multienzyme, meg 100.0
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
3tzy_A491 Polyketide synthase PKS13; acyltransferase, long f 100.0
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 100.0
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 100.0
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 100.0
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 100.0
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 100.0
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 100.0
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 100.0
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 100.0
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 100.0
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 100.0
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 100.0
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 100.0
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 100.0
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 100.0
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3kg8_A 308 CURJ; polyketide synthase, double hotdog fold, deh 98.04
3kg7_A 293 CURH; polyketide synthase, double hotdog fold, deh 98.0
3hrq_A 357 PKS, aflatoxin biosynthesis polyketide synthase; h 98.0
3kg6_A 285 CURF; polyketide synthase, double hotdog fold, deh 97.98
3kg9_A 296 CURK; polyketide synthase, double hotdog fold, deh 97.98
3el6_A 313 Erythromycin dehydratase; dehydratase double hotdo 97.87
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 96.81
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 91.7
3dqz_A258 Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl 89.39
3ibt_A264 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, 88.48
1isp_A181 Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 87.54
2qs9_A194 Retinoblastoma-binding protein 9; B5T overexpresse 86.43
1ehy_A294 Protein (soluble epoxide hydrolase); alpha/beta hy 85.85
3bf7_A255 Esterase YBFF; thioesterase, helical CAP, hydrolas 85.46
1tqh_A247 Carboxylesterase precursor; tetrahedral intermedia 85.43
2wj6_A276 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid 85.35
3om8_A266 Probable hydrolase; structural genomics, PSI-2, pr 85.16
3v48_A268 Aminohydrolase, putative aminoacrylate hydrolase R 84.31
3bwx_A285 Alpha/beta hydrolase; YP_496220.1, joint center fo 84.11
2yys_A286 Proline iminopeptidase-related protein; TTHA1809, 83.81
1iup_A282 META-cleavage product hydrolase; aromatic compound 83.75
2ocg_A254 Valacyclovir hydrolase; alpha beta hydrolase fold; 83.68
1wom_A271 RSBQ, sigma factor SIGB regulation protein RSBQ; a 83.37
2puj_A286 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; 83.29
2xua_A266 PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate 83.23
1azw_A313 Proline iminopeptidase; aminopeptidase, serine pro 82.82
1c4x_A285 BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di 82.75
2wue_A291 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas 82.7
2xmz_A269 Hydrolase, alpha/beta hydrolase fold family; menaq 82.63
2wfl_A264 Polyneuridine-aldehyde esterase; alkaloid metaboli 82.58
1q0r_A298 RDMC, aclacinomycin methylesterase; anthracycline, 82.13
3afi_E316 Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 82.02
1tht_A305 Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. 81.47
1wm1_A317 Proline iminopeptidase; complex with inhibitor, hy 81.27
3qyj_A291 ALR0039 protein; alpha/beta fold, hydrolase; 1.78A 80.68
1xkl_A273 SABP2, salicylic acid-binding protein 2; alpha-bet 80.66
3nwo_A330 PIP, proline iminopeptidase; structural genomics, 80.66
1u2e_A289 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 80.63
1brt_A277 Bromoperoxidase A2; haloperoxidase, oxidoreductase 80.56
2xt0_A297 Haloalkane dehalogenase; hydrolase, alpha-beta hyd 80.42
1b6g_A310 Haloalkane dehalogenase; hydrolase, alpha/beta-hyd 80.4
1zoi_A276 Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo 80.15
4g9e_A279 AHL-lactonase, alpha/beta hydrolase fold protein; 80.1
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
Probab=100.00  E-value=6.3e-81  Score=671.73  Aligned_cols=379  Identities=40%  Similarity=0.646  Sum_probs=292.1

Q ss_pred             CCcEEEEEcCCCcCcccCcCC----------------------chhHHhhcCCCCc-------chhHHHHHHHHHHHHHH
Q psy11500          3 GEKYEVVISGVGGVFPECHSF----------------------HEFRELLFSGKSG-------VTVDNRRWPIGLVDILF   53 (387)
Q Consensus         3 ~~~v~f~F~GqGsq~~~m~~~----------------------~~l~~~l~~~~~~-------~q~ai~a~q~al~~ll~   53 (387)
                      .++++|||||||+||++|...                      .++.++++.++..       .||++|++||||+++|+
T Consensus       491 ~~~v~fvF~GQGsQ~~gMg~~L~~~p~fr~~~~~~~~~l~~lg~~l~~~l~~~~~~~l~~~~~~Qpal~a~q~AL~~ll~  570 (965)
T 3hhd_A          491 ERPLWFICSGMGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDDIVHSFVSLTAIQIGLIDLLS  570 (965)
T ss_dssp             CCCEEEEECCSSCCCTTTTTTGGGSHHHHHHHHHHHHHHGGGTCCHHHHHHCCCTTGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcchhhHHHHHHhChHHHHHHHHHHHHHHHcCCCHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            457999999999999999332                      3445555554432       39999999999999999


Q ss_pred             HcCCCCCEEEecChhHHHHHHHhCcCCHHHHHHHHHHHHHHhcccCCCCceEEEEeCCHHHHHHhhcCCCCEEEEEeeCC
Q psy11500         54 ALGITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNAS  133 (387)
Q Consensus        54 ~~Gi~P~~v~GHS~GE~aAa~~aG~ls~eda~~lv~~Rg~~~~~~~~~~g~M~av~~~~~~~~~~l~~~~~v~iA~~Nsp  133 (387)
                      +|||+|++|+|||+|||+|||+||+||++||+++++.||++|++.....|+|++|+++.+++++++..  +++|||+|||
T Consensus       571 ~~Gi~P~~v~GHS~GEiaAa~~AG~lsleda~~lv~~Rg~lm~~~~~~~G~M~AV~~~~~~v~~~l~~--~v~iA~~NsP  648 (965)
T 3hhd_A          571 CMGLRPDGIVGHSLGEVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPPGAMAAVGLSWEECKQRCPP--GVVPACHNSK  648 (965)
T ss_dssp             HTTCCCSEEEECTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTSCCCCEEEEEESSCHHHHHHHCCT--TCEEEEEEET
T ss_pred             HcCCCCcEEeccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcccCCceEEEecCCHHHHHHHhcc--CeEEEEEcCC
Confidence            99999999999999999999999999999999999999999987656789999999999999999975  7999999999


Q ss_pred             CcEEEeCCHHHHHHHHHHHHhCCceEEEcccCCcCCcccchhhHHHHHHHHHhhcCCCCCCCCceEEecccccccCCCCc
Q psy11500        134 DSCTLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPL  213 (387)
Q Consensus       134 ~~~visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHS~~m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~g~~~~~~~~  213 (387)
                      +|+||||+.++|+++.+.|+++|+++++|+|+++||||++|+|+.++|++.++++...++.+.++++|++++...+....
T Consensus       649 ~~~ViSG~~~al~~l~~~l~~~g~~~~~L~v~~~AfHS~~m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~  728 (965)
T 3hhd_A          649 DTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWHSSL  728 (965)
T ss_dssp             TEEEEEEEHHHHHHHHHHHHHTTCCEEEECCSSCCCSSGGGGGGHHHHHHHHHHHCSSCCBCCTTBCCSSSCGGGTTSHH
T ss_pred             CCEEecCCHHHHHHHHHHHHhcCceeEecCCCCCCCcChHhcccHHHHHHHHHHhhccCCCCcceEEeeecccccccccc
Confidence            99999999999999999999999999999992399999999999999999999986655556788999988655433222


Q ss_pred             cCCCCHHHHHHhcccceehHHHHhhccCCCeEEEECCChhHHHHHHHHhCCCCceeeecccCCCCChHHHHHHHHHHHHH
Q psy11500        214 AQTSSAEYHTNNLLSSVFFEEASAHIPANAICIEIAPHGLLQAILKRSLAEKEVVNIPLTLRGVKDGVKFILNSIGKLYL  293 (387)
Q Consensus       214 ~~~~~~~y~~~~l~~pV~f~~ai~~l~~~~~~vEiGP~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~~  293 (387)
                      .+..+++||++|+++||+|.++++.+.+.++|||||||++|+++++++++.. ..++++++|+..+++.++++++++||+
T Consensus       729 ~~~~~~~yw~~~l~~pV~F~~av~~l~~~~~fvEiGP~~~L~~~~~~~l~~~-~~~~~~l~r~~~~~~~~ll~al~~L~~  807 (965)
T 3hhd_A          729 ARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKPS-CTIIPLMKKDHRDNLEFFLAGIGRLHL  807 (965)
T ss_dssp             HHBCCHHHHHHHHHSCBCHHHHHTTSCTTCEEEEESSSCTTHHHHHHHSCTT-CEEEECCCTTCSCHHHHHHHHHHHHHH
T ss_pred             hhcccHHHHHHHhhCcEeHHHHHHHHhcCCEEEEeCChHHHHHHHHHHhCCC-CeEEecccCCCCcHHHHHHHHHHHHHh
Confidence            3445799999999999999999999999899999999999999999999754 788999998756789999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhhhcccCC---CCccccccccccc-cccccCCccCCee
Q psy11500        294 NGLDLNLAPLYPEVQYPVSRGTKPLGHFVDWEHGHEYKLSELEVQIKSYP---ADEEFAGLFHEVY-KTNVNRHTLRGYV  369 (387)
Q Consensus       294 ~G~~v~~~~~~~~~~~~~~~~~~~~lP~y~~~~~~~W~~~~~~~~~~~g~---~~~~~~~~~~~~~-~~~l~~H~v~g~~  369 (387)
                      +|++|||..+|+...++..+.+++.||+|||||++||.+++..... .|.   ....+...++... .|||+||+|+|++
T Consensus       808 ~G~~vd~~~~~~~~~~~~~~~~~~~lP~Y~w~~~~~w~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~pwl~~H~v~g~~  886 (965)
T 3hhd_A          808 SGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSLAWDVPAAEDFP-NGSGSPSAAIYNIDTSSESPDHYLVDHTLDGRV  886 (965)
T ss_dssp             TTCCCCGGGGSCCCCSSCCTTCCCSGGGCCCCCCSCCCCCCGGGSC-C--------------------------------
T ss_pred             CCCCCCHHHhCCCcccccCCCcccCCCCcccccccccccccccccC-CCCcCCCceEEEeecCccccCccccCceeCCeE
Confidence            9999999999987766665666788999999999999987643211 121   1112223333333 6899999999999


Q ss_pred             eehhccchH-HHhhccc
Q psy11500        370 LTPDTSAQD-ETENLEQ  385 (387)
Q Consensus       370 l~Paa~~~e-a~~A~~~  385 (387)
                      ||||++|+| |+||+.|
T Consensus       887 ~~P~a~y~~~a~~a~~~  903 (965)
T 3hhd_A          887 LFPATGYLSIVWKTLAR  903 (965)
T ss_dssp             -----------------
T ss_pred             ecCcHHHHHHHHHHHHH
Confidence            999999999 9999765
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula} Back     alignment and structure
>3kg7_A CURH; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.77A {Lyngbya majuscula} Back     alignment and structure
>3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold, iterative type I PKS, norsolorinic acid, product template domain; HET: PLM; 1.80A {Aspergillus parasiticus} PDB: 3hrr_A* Back     alignment and structure
>3kg6_A CURF; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.70A {Lyngbya majuscula} Back     alignment and structure
>3kg9_A CURK; polyketide synthase, double hotdog fold, dehydratase, lyase; 1.70A {Lyngbya majuscula} Back     alignment and structure
>3el6_A Erythromycin dehydratase; dehydratase double hotdog fold CIS-proline, acyltransferase, antibiotic biosynthesis; 1.85A {Saccharopolyspora erythraea} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 Back     alignment and structure
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Back     alignment and structure
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Back     alignment and structure
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} Back     alignment and structure
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Back     alignment and structure
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Back     alignment and structure
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Back     alignment and structure
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Back     alignment and structure
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 Back     alignment and structure
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Back     alignment and structure
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Back     alignment and structure
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Back     alignment and structure
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Back     alignment and structure
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Back     alignment and structure
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Back     alignment and structure
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Back     alignment and structure
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Back     alignment and structure
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Back     alignment and structure
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Back     alignment and structure
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Back     alignment and structure
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Back     alignment and structure
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Back     alignment and structure
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Back     alignment and structure
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Back     alignment and structure
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Back     alignment and structure
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Back     alignment and structure
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Back     alignment and structure
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Back     alignment and structure
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Back     alignment and structure
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Back     alignment and structure
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Back     alignment and structure
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Back     alignment and structure
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Back     alignment and structure
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 387
d1nm2a262 d.58.23.1 (A:134-195) Probable ACP-binding domain 6e-07
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 3e-06
d2gfva1250 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { 8e-05
d1e5ma1250 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { 1e-04
d1mlaa270 d.58.23.1 (A:128-197) Probable ACP-binding domain 1e-04
d1tqyb1208 c.95.1.1 (B:2-209) Actinorhodin polyketide putativ 1e-04
d2vbaa1253 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E 2e-04
d1j3na1249 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { 2e-04
d1tqya1216 c.95.1.1 (A:3-218) Actinorhodin polyketide putativ 2e-04
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 2e-04
d2ix4a1270 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II 7e-04
d1ox0a1256 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II 8e-04
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 62 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Probable ACP-binding domain of malonyl-CoA ACP transacylase
family: Probable ACP-binding domain of malonyl-CoA ACP transacylase
domain: Probable ACP-binding domain of malonyl-CoA ACP transacylase
species: Streptomyces coelicolor A3(2) [TaxId: 100226]

 Score = 44.0 bits (104), Expect = 6e-07
 Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 102 DGKMAAI-GLGYKQMKDMLADYPTIEIACHNASDSCTLSGPSADVEALVESLVAQGIFAR 160
           +  M+A+ G   +     L     +  A  N +     +G    + AL E          
Sbjct: 1   ETGMSALLGGDPEVSVAHLERL-GLTPANVNGAGQIVAAGTMEQLAALNEDKPEGVRKVV 59
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Length = 70 Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 Back     information, alignment and structure
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 Back     information, alignment and structure
>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 100.0
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 100.0
d1mlaa270 Probable ACP-binding domain of malonyl-CoA ACP tra 99.46
d1nm2a262 Probable ACP-binding domain of malonyl-CoA ACP tra 99.32
d1imja_208 Ccg1/TafII250-interacting factor B (Cib) {Human (H 87.54
d1c4xa_281 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas 87.17
d1ispa_179 Lipase A {Bacillus subtilis [TaxId: 1423]} 85.58
d2dsta1122 Hypothetical protein TTHA1544 {Thermus thermophilu 82.91
d1hkha_279 Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] 82.35
d1brta_277 Bromoperoxidase A2 {Streptomyces aureofaciens [Tax 80.9
d1ehya_293 Bacterial epoxide hydrolase {Agrobacterium radioba 80.57
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-45  Score=334.73  Aligned_cols=190  Identities=18%  Similarity=0.216  Sum_probs=161.9

Q ss_pred             cEEEEEcCCCcCcccCcC-----CchhHH---------------hhcCCC-------CcchhHHHHHHHHHHHHHHHc-C
Q psy11500          5 KYEVVISGVGGVFPECHS-----FHEFRE---------------LLFSGK-------SGVTVDNRRWPIGLVDILFAL-G   56 (387)
Q Consensus         5 ~v~f~F~GqGsq~~~m~~-----~~~l~~---------------~l~~~~-------~~~q~ai~a~q~al~~ll~~~-G   56 (387)
                      ++||||||||+||+||..     ++.+++               .++..+       ...||++|++|+|++++|+++ |
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~~~g   80 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGG   80 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHTSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHhCCCHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            589999999999999922     233333               332222       124999999999999999986 9


Q ss_pred             CCCCEEEecChhHHHHHHHhCcCCHHHHHHHHHHHHHHhcccCCCCceEEEEeCCHHHHHHhhcCCCCEEEEEeeCCCcE
Q psy11500         57 ITPDGIVGHSVGELGCAYADGCFTAEQMILAAHARGKASIETDTIDGKMAAIGLGYKQMKDMLADYPTIEIACHNASDSC  136 (387)
Q Consensus        57 i~P~~v~GHS~GE~aAa~~aG~ls~eda~~lv~~Rg~~~~~~~~~~g~M~av~~~~~~~~~~l~~~~~v~iA~~Nsp~~~  136 (387)
                      ++|++|+|||+|||+|+|+||++|++|+++++..||++|+...                                     
T Consensus        81 ~~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~-------------------------------------  123 (235)
T d1mlaa1          81 KAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAV-------------------------------------  123 (235)
T ss_dssp             CCCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHS-------------------------------------
T ss_pred             CCceeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcC-------------------------------------
Confidence            9999999999999999999999999999999999999986521                                     


Q ss_pred             EEeCCHHHHHHHHHHHHhCCceEEEcccCCcCCcccchhhHHHHHHHHHhhcCCCCCCCCceEEecccccccCCCCccCC
Q psy11500        137 TLSGPSADVEALVESLVAQGIFARAVNVANIAYHSRYIAPAAPRLLQYLKKVIPSPKPRSSKWISSSILEDAWGSPLAQT  216 (387)
Q Consensus       137 visG~~~~l~~l~~~l~~~gi~~~~L~v~~~afHS~~m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~  216 (387)
                                                 . ..||||++|+++.++|++.++++.++.  |.+|++||++|...  .+.+. 
T Consensus       124 ---------------------------~-~~pfHs~~m~~~~~~~~~~l~~v~~~~--p~~pviS~~tg~~~--~~~~~-  170 (235)
T d1mlaa1         124 ---------------------------P-EVPSHCALMKPAADKLAVELAKITFNA--PTVPVVNNVDVKCE--TNGDA-  170 (235)
T ss_dssp             ---------------------------C-TSCTTSGGGHHHHHHHHHHHHTSCCCC--CSSCBBCTTTCCBC--CSHHH-
T ss_pred             ---------------------------C-CCcchhHHhhhhHHHHHHHHhcCCCCC--CcceEEeCCCCCCC--CCHHH-
Confidence                                       1 469999999999999999999999887  89999999998764  22222 


Q ss_pred             CCHHHHHHhcccceehHHHHhhccCCC--eEEEECCChhHHHHHHHHhCCC
Q psy11500        217 SSAEYHTNNLLSSVFFEEASAHIPANA--ICIEIAPHGLLQAILKRSLAEK  265 (387)
Q Consensus       217 ~~~~y~~~~l~~pV~f~~ai~~l~~~~--~~vEiGP~~~L~~~~~~~l~~~  265 (387)
                       .++||++|+++||+|.++++.+.+++  +||||||+++|++++|+++++.
T Consensus       171 -~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~i~~~~  220 (235)
T d1mlaa1         171 -IRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTL  220 (235)
T ss_dssp             -HHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTTC
T ss_pred             -HHHHHHHhccCCccHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCCC
Confidence             37999999999999999999998875  6999999999999999999763
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Back     information, alignment and structure
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Back     information, alignment and structure
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Back     information, alignment and structure
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Back     information, alignment and structure