Psyllid ID: psy11501

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEccccccccc
Coil and Loop (DISEMBL)
mgthceevcgpgrfgqncsqecqcrngaechpatgecscqpgftgslceercppgthgpscinrcrcqngaicnpangqclcapgwmgsvcnvpctpgmwgqgctvpcecfngaschhvtgecqcepgfkgqk
Flexible Loop (DISEMBL)
mgthceevcgpgrfgqNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGEcqcepgfkgqk
Low Complexity Region (SEG)
MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK
Disordered region (IsUnstruct)
*******VCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQC********
Disordered Region (DISOPRED)
MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKG**
Disordered Region (DISEMBL)
MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK
Disordered Region (DISPRO)
****CEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGF****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
A0JM12	1114	Multiple epidermal growth	yes	N/A	0.977	0.116	0.507	6e-33
Q6DIB5	1147	Multiple epidermal growth	yes	N/A	0.977	0.113	0.507	7e-33
Q96KG7	1140	Multiple epidermal growth	yes	N/A	0.646	0.075	0.507	1e-32
A6BM72	1044	Multiple epidermal growth	no	N/A	0.969	0.123	0.530	2e-32
Q80T91	1091	Multiple epidermal growth	no	N/A	0.969	0.118	0.530	2e-32
O75095	1541	Multiple epidermal growth	no	N/A	0.977	0.084	0.511	5e-27
Q80V70	1572	Multiple epidermal growth	no	N/A	0.984	0.083	0.469	2e-26
O88281	1574	Multiple epidermal growth	no	N/A	0.977	0.082	0.465	1e-25
Q5VY43	1037	Platelet endothelial aggr	no	N/A	0.984	0.126	0.439	1e-23
Q9XWD6	1111	Cell death abnormality pr	no	N/A	0.992	0.118	0.432	5e-23

>sp|A0JM12|MEG10_XENTR Multiple epidermal growth factor-like domains protein 10 OS=Xenopus tropicalis GN=megf10 PE=2 SV=1

 Score =  139 bits (349), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G  CEE C  G +G +C Q+CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HG  C
Sbjct: 174 GWRCEERCDQGTYGNDCQQKCQCQNGASCDHVTGECRCPPGYTGAFCEDLCPPGKHGSQC 233

Query: 62  INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
             RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct: 234 EERCPCQNGGVCHHVTGECSCPAGWMGTVCGQPCPEGRYGRNCSQECQCHNGGTCDSATG 293

Query: 122 ECQCEPGFKGQK 133
           +C C PG+ G++
Sbjct: 294 QCYCSPGYNGER 305

Membrane receptor involved in phagocytosis. May also regulate homotypic retinal neuron repulsion. May play role in cell adhesion and motility. May also be an essential factor in the regulation of myogenesis, controlling the balance between skeletal muscle satellite cells proliferation and differentiation.
Xenopus tropicalis (taxid: 8364)

>sp|Q6DIB5|MEG10_MOUSE Multiple epidermal growth factor-like domains protein 10 OS=Mus musculus GN=Megf10 PE=1 SV=1

 Score =  139 bits (349), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G  CE+ C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct: 175 GWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPHC 234

Query: 62  INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
             RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct: 235 EQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query: 122 ECQCEPGFKGQK 133
           +C C PG+ G++
Sbjct: 295 QCHCSPGYTGER 306

Membrane receptor involved in phagocytosis by macrophages of apoptotic cells. Cooperates with ABCA1 within the process of engulfment. Promotes the formation of large intracellular vacuoles and may be responsible for the uptake of amyloid-beta peptides. May also function in the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements. May play role in cell adhesion and motility. Is also an essential factor in the regulation of myogenesis. Controls the balance between skeletal muscle satellite cells proliferation and differentiation problably through regulation of the notch signaling pathway.

Mus musculus (taxid: 10090)

>sp|Q96KG7|MEG10_HUMAN Multiple epidermal growth factor-like domains protein 10 OS=Homo sapiens GN=MEGF10 PE=1 SV=1

 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G  CE+ C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct: 175 GWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC 234

Query: 62  INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
             RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct: 235 EQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query: 122 ECQCEPGFKGQK 133
           +C C PG+ G++
Sbjct: 295 QCHCSPGYTGER 306

Membrane receptor involved in phagocytosis by macrophages of apoptotic cells. Cooperates with ABCA1 within the process of engulfment. Promotes the formation of large intracellular vacuoles and may be responsible for the uptake of amyloid-beta peptides. May also function in the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements. May play role in cell adhesion and motility. Is also an essential factor in the regulation of myogenesis. Controls the balance between skeletal muscle satellite cells proliferation and differentiation problably through regulation of the notch signaling pathway.

Homo sapiens (taxid: 9606)

>sp|A6BM72|MEG11_HUMAN Multiple epidermal growth factor-like domains protein 11 OS=Homo sapiens GN=MEGF11 PE=2 SV=3

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 84/132 (63%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G  CEE+C PG  G+ C   CQCR+GA C P  GEC C PG+TG  CEE CPPG+HG  C
Sbjct: 169 GWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAPGYTGVYCEELCPPGSHGAHC 228

Query: 62  INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
             RC CQNG  C+   G+C C PGW G+VC  PC PG +GQ C+  C C +G  C HVTG
Sbjct: 229 ELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTG 288

Query: 122 ECQCEPGFKGQK 133
           +C C  G+ G +
Sbjct: 289 QCHCTAGYMGDR 300

May regulate the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements.

Homo sapiens (taxid: 9606)

>sp|Q80T91|MEG11_MOUSE Multiple epidermal growth factor-like domains protein 11 OS=Mus musculus GN=Megf11 PE=1 SV=3

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 84/132 (63%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G  CEE+C PG  G+ C   CQC +GA C P TGEC C PG+TG  CEE CPPG+HG  C
Sbjct: 168 GWRCEELCAPGTHGKGCQLLCQCHHGASCDPRTGECLCAPGYTGVYCEELCPPGSHGAHC 227

Query: 62  INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
             RC CQNG  C+   G+C C PGW G+VC  PC PG +GQ C+  C C +G  C HVTG
Sbjct: 228 ELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTG 287

Query: 122 ECQCEPGFKGQK 133
           +C C  G+ G +
Sbjct: 288 QCHCTAGYMGDR 299

May regulate the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements.

Mus musculus (taxid: 10090)

>sp|O75095|MEGF6_HUMAN Multiple epidermal growth factor-like domains protein 6 OS=Homo sapiens GN=MEGF6 PE=1 SV=4

 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 77/131 (58%)

Query: 1    MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
             G HCE  C PGR+G  C  EC C N + C PATG C C PGF G  CE  CPPG HG  
Sbjct: 1327 TGRHCELACPPGRYGAACHLECSCHNNSTCEPATGTCRCGPGFYGQACEHPCPPGFHGAG 1386

Query: 61   CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
            C   C CQ+GA C+P +G+CLC  G+ G  C   C PG +G+GC   C+C  GA C  VT
Sbjct: 1387 CQGLCWCQHGAPCDPISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVT 1446

Query: 121  GECQCEPGFKG 131
            G C C PG  G
Sbjct: 1447 GLCLCPPGRSG 1457

Homo sapiens (taxid: 9606)

>sp|Q80V70|MEGF6_MOUSE Multiple epidermal growth factor-like domains protein 6 OS=Mus musculus GN=Megf6 PE=2 SV=3

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 76/132 (57%)

Query: 2    GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
            G HC + C P  FG NCSQ C C NGA C P  G+C C PG+ G  C + CP G +G +C
Sbjct: 985  GPHCAQTCPPLTFGLNCSQICTCFNGASCDPVLGQCHCAPGWMGPTCLQACPAGLYGKNC 1044

Query: 62   INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
             + C C+NG  C+P  GQC C  GW G  C   C PG  G GC + C C NG +C  +TG
Sbjct: 1045 QHSCLCRNGGSCDPILGQCTCPEGWTGLACENECLPGHHGAGCRLNCSCLNGGTCDRLTG 1104

Query: 122  ECQCEPGFKGQK 133
             C+C  G+ G K
Sbjct: 1105 HCRCPAGWTGDK 1116

Mus musculus (taxid: 10090)

>sp|O88281|MEGF6_RAT Multiple epidermal growth factor-like domains protein 6 OS=Rattus norvegicus GN=Megf6 PE=1 SV=1

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 73/131 (55%)

Query: 1    MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            MG  C + C PG +G+NC   C CRNG  C P  G+C+C  G+TG  CE  C PG +   
Sbjct: 1029 MGPTCLQACPPGLYGKNCQHSCLCRNGGRCDPILGQCTCPEGWTGLACENECLPGHYAAG 1088

Query: 61   CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
            C   C C +G IC+   G CLC  GW G  C   C  G +G  C   C C  GASCHHVT
Sbjct: 1089 CQLNCSCLHGGICDRLTGHCLCPAGWTGDKCQSSCVSGTFGVHCEEHCACRKGASCHHVT 1148

Query: 121  GECQCEPGFKG 131
            G C C PG++G
Sbjct: 1149 GACFCPPGWRG 1159

Rattus norvegicus (taxid: 10116)

>sp|Q5VY43|PEAR1_HUMAN Platelet endothelial aggregation receptor 1 OS=Homo sapiens GN=PEAR1 PE=1 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
           MG  C   C  G +G NCS  C C+NG  C P  G C C PGF G  C+  C PG +G  
Sbjct: 559 MGARCHLSCPEGLWGVNCSNTCTCKNGGTCLPENGNCVCAPGFRGPSCQRSCQPGRYGKR 618

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C+  C+C N + C+P+NG C C  GW G  C+ PC PG WG+ C   C+C +G +CH   
Sbjct: 619 CVP-CKCANHSFCHPSNGTCYCLAGWTGPDCSQPCPPGHWGENCAQTCQCHHGGTCHPQD 677

Query: 121 GECQCEPGFKGQ 132
           G C C  G+ G 
Sbjct: 678 GSCICPLGWTGH 689

When overexpressed, reduces the number of both early and late non-adherent myeloid progenitor cells.

Homo sapiens (taxid: 9606)

>sp|Q9XWD6|CED1_CAEEL Cell death abnormality protein 1 OS=Caenorhabditis elegans GN=ced-1 PE=1 SV=1

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 2/134 (1%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G HCE  C  G +G  C Q C C +G  C P TGEC C+PG+ G  C E+CP G +G  C
Sbjct: 669 GIHCEHNCPAGSYGDGCQQVCSCADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYGYGC 728

Query: 62  INRC-RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGAS-CHHV 119
              C +C +G+ C+  NG C+C  G  G++C  PC+ G WG GC   C C +    C+  
Sbjct: 729 ALDCPKCASGSTCDHINGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEYKQCNAQ 788

Query: 120 TGECQCEPGFKGQK 133
           TGEC C  GF+G +
Sbjct: 789 TGECSCPAGFQGDR 802

Involved in programmed cell death/apoptosis. Acts by recruiting ced-6 to phagosomes which enables actin-dependent cytoskeletal reorganization and subsequent engulfment of the apoptotic cell corpse. Has a role in the association of ppk-3 and rab-7 with the phagosomal surface which is necessary for the incorporation of lysosomes to phagosomes during phagosome maturation. Activates the expression of unfolded protein response genes, which are involved in the immune response to live bacteria.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
383848080	1002	PREDICTED: multiple epidermal growth fac	0.977	0.129	0.548	2e-37
350424059	993	PREDICTED: multiple epidermal growth fac	0.977	0.130	0.541	3e-37
340726359	991	PREDICTED: multiple epidermal growth fac	0.977	0.131	0.541	4e-37
307182743	991	Multiple epidermal growth factor-like do	0.977	0.131	0.548	8e-37
380024321	1001	PREDICTED: multiple epidermal growth fac	0.977	0.129	0.533	2e-36
380024323	990	PREDICTED: multiple epidermal growth fac	0.977	0.131	0.533	2e-36
328779088	967	PREDICTED: draper [Apis mellifera]	0.977	0.134	0.533	2e-36
345495719	1020	PREDICTED: multiple epidermal growth fac	0.984	0.128	0.548	7e-36
307193492	1007	Multiple epidermal growth factor-like do	0.977	0.129	0.533	1e-35
328723650	1000	PREDICTED: multiple epidermal growth fac	0.977	0.13	0.537	2e-34

>gi|383848080|ref|XP_003699680.1| PREDICTED: multiple epidermal growth factor-like domains protein 11-like [Megachile rotundata]

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 94/133 (70%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G +CE+ C P R+GQ+C +EC+CRNG  CH  +GEC C PG+TG LC++ CPPG HG  
Sbjct: 166 TGDYCEQQCSPDRYGQDCGEECRCRNGGSCHHISGECHCAPGYTGPLCDDFCPPGKHGDE 225

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C+CQNG  CNP  G C CAPGW G VC + C  G WG+ C+  C+C+N ASCHH+T
Sbjct: 226 CKSDCKCQNGGSCNPTTGSCYCAPGWTGIVCALRCPEGFWGKNCSQVCDCYNKASCHHLT 285

Query: 121 GECQCEPGFKGQK 133
           GEC+C+PG+   K
Sbjct: 286 GECECKPGYYDVK 298

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350424059|ref|XP_003493675.1| PREDICTED: multiple epidermal growth factor-like domains protein 10-like [Bombus impatiens]

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 94/133 (70%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G +C + C P R+GQ+C +EC+CRNG  CH  +GEC C PG+TG LC++ CPPG HG  
Sbjct: 166 TGKYCSQECPPDRYGQDCGEECRCRNGGSCHHISGECHCAPGYTGPLCDDLCPPGKHGDE 225

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C+CQNG  CNP  G+C C PGW GSVC   C  G WG+ C+  C+C+NGA CHH+T
Sbjct: 226 CKSECKCQNGGSCNPTTGECYCTPGWTGSVCANRCPEGFWGKNCSQECDCYNGAGCHHIT 285

Query: 121 GECQCEPGFKGQK 133
           GEC+C+PG+  +K
Sbjct: 286 GECECKPGYYDEK 298

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726359|ref|XP_003401527.1| PREDICTED: multiple epidermal growth factor-like domains protein 10-like [Bombus terrestris]

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 94/133 (70%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G +C + C P R+GQ+C +EC+CRNG  CH  +GEC C PG+TG LC++ CPPG HG  
Sbjct: 166 TGKYCSQECPPDRYGQDCGEECRCRNGGSCHHISGECHCAPGYTGPLCDDFCPPGKHGDE 225

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C+CQNG  CNP  G+C C PGW GSVC   C  G WG+ C+  C+C+NGA CHH+T
Sbjct: 226 CKSECKCQNGGSCNPTTGECYCTPGWTGSVCANRCPEGFWGKNCSQECDCYNGAGCHHIT 285

Query: 121 GECQCEPGFKGQK 133
           GEC+C+PG+  +K
Sbjct: 286 GECECKPGYYDEK 298

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307182743|gb|EFN69867.1| Multiple epidermal growth factor-like domains 11 [Camponotus floridanus]

 Score =  158 bits (399), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 93/133 (69%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G +C++ C P R+GQ+C++EC+CRNG  CH  +GEC C  G+TG LC++ CP G HG  
Sbjct: 175 TGVYCDQKCPPNRYGQDCAEECRCRNGGRCHHISGECHCASGYTGPLCDDLCPLGKHGEE 234

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + CRCQNG  C+P  G+C C PGW GSVC   C  G WG+ C+  C+C+N ASCHHVT
Sbjct: 235 CKSECRCQNGGSCSPLTGECYCTPGWTGSVCANRCPEGFWGKNCSQTCDCYNDASCHHVT 294

Query: 121 GECQCEPGFKGQK 133
           GECQC+PGF   K
Sbjct: 295 GECQCKPGFYDDK 307

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024321|ref|XP_003695949.1| PREDICTED: multiple epidermal growth factor-like domains protein 10-like isoform 1 [Apis florea]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 94/133 (70%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            GT+C + C   R+GQ+C +EC+CRNG  CH  +GEC C PG+TG LC++ CPPG HG  
Sbjct: 166 TGTYCNQECPSNRYGQDCGEECRCRNGGSCHHISGECHCAPGYTGPLCDDLCPPGKHGDE 225

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C+CQNG  CNP  G+C C PGW GSVC   C  G WG+ C+  C+C+NGASCHH+T
Sbjct: 226 CKSECKCQNGGSCNPTTGECYCTPGWTGSVCASRCPEGFWGKNCSQECDCYNGASCHHIT 285

Query: 121 GECQCEPGFKGQK 133
           G+C+C+ G+  +K
Sbjct: 286 GKCECKSGYYDEK 298

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024323|ref|XP_003695950.1| PREDICTED: multiple epidermal growth factor-like domains protein 10-like isoform 2 [Apis florea]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 94/133 (70%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            GT+C + C   R+GQ+C +EC+CRNG  CH  +GEC C PG+TG LC++ CPPG HG  
Sbjct: 166 TGTYCNQECPSNRYGQDCGEECRCRNGGSCHHISGECHCAPGYTGPLCDDLCPPGKHGDE 225

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C+CQNG  CNP  G+C C PGW GSVC   C  G WG+ C+  C+C+NGASCHH+T
Sbjct: 226 CKSECKCQNGGSCNPTTGECYCTPGWTGSVCASRCPEGFWGKNCSQECDCYNGASCHHIT 285

Query: 121 GECQCEPGFKGQK 133
           G+C+C+ G+  +K
Sbjct: 286 GKCECKSGYYDEK 298

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779088|ref|XP_624855.2| PREDICTED: draper [Apis mellifera]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 93/133 (69%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            GT+C + C   R+GQ+C +EC+CRNG  CH  +GEC C PG+TG LC++ CPPG HG  
Sbjct: 166 TGTYCNQECPSNRYGQDCGEECRCRNGGSCHHISGECHCAPGYTGPLCDDLCPPGKHGDE 225

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C+CQNG  CNP  G+C C PGW GSVC   C  G WG+ C+  C+C+NGA CHH+T
Sbjct: 226 CKSECKCQNGGSCNPTTGECYCTPGWTGSVCASRCPEGFWGKNCSQECDCYNGAGCHHIT 285

Query: 121 GECQCEPGFKGQK 133
           GEC+C+ G+  +K
Sbjct: 286 GECECKSGYYDEK 298

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495719|ref|XP_001606322.2| PREDICTED: multiple epidermal growth factor-like domains protein 11-like [Nasonia vitripennis]

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 90/133 (67%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G  C E C   R+GQNC++EC+C N   CH  +GEC C PG+TG LC E CP G HG  
Sbjct: 175 TGEFCNERCPANRYGQNCAEECRCLNAGSCHHISGECHCAPGYTGPLCGELCPAGKHGDD 234

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + CRCQNG  C+P  G+C C PGW GSVC   C  G WG+ C+VPCEC+NGA C H+T
Sbjct: 235 CKSECRCQNGGSCSPTTGECFCTPGWTGSVCANRCPEGFWGKNCSVPCECYNGAGCDHIT 294

Query: 121 GECQCEPGFKGQK 133
           GEC+C+PG+ G +
Sbjct: 295 GECRCKPGYHGDR 307

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193492|gb|EFN76269.1| Multiple epidermal growth factor-like domains 10 [Harpegnathos saltator]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 92/133 (69%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G +C++ C P R+GQ+CS++C+C NG  CH  +GEC C  G+TG LC++ CP G HG  
Sbjct: 171 TGVYCDQKCPPDRYGQDCSEKCRCMNGGSCHHISGECHCASGYTGPLCDDLCPLGKHGEE 230

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C + C CQNG  C+P  G C C PGWMG VC   C  G WG+ C++ C+C+N ASCHH+T
Sbjct: 231 CKSECSCQNGGSCSPTTGDCDCTPGWMGKVCAHRCQEGFWGKNCSLSCDCYNEASCHHIT 290

Query: 121 GECQCEPGFKGQK 133
           GECQC+PGF G K
Sbjct: 291 GECQCKPGFYGDK 303

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723650|ref|XP_001942552.2| PREDICTED: multiple epidermal growth factor-like domains protein 10-like [Acyrthosiphon pisum]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 86/132 (65%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
           G  C E C P  FG NC +EC C+NGA C P TG+C C PGF G LC++RCP G HG  C
Sbjct: 177 GVDCSEKCSPHNFGINCVEECPCKNGAICDPVTGKCDCPPGFRGPLCDQRCPSGRHGDEC 236

Query: 62  INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
            + C+CQN   C+P  G CLC+ GW G VC   C PG WG  C+  C+CFN   CHH+TG
Sbjct: 237 QSECKCQNAGSCDPQTGHCLCSSGWTGMVCGEKCEPGKWGVNCSKSCDCFNEGYCHHITG 296

Query: 122 ECQCEPGFKGQK 133
           +CQC PG+ G+K
Sbjct: 297 QCQCMPGYYGEK 308

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
UNIPROTKB|F1RKL7	305	MEGF10 "Uncharacterized protei	0.984	0.429	0.519	1.5e-44
UNIPROTKB|F1MET4	1136	MEGF10 "Uncharacterized protei	0.992	0.116	0.515	1.1e-43
FB|FBgn0027594	1031	drpr "draper" [Drosophila mela	0.992	0.128	0.515	1.4e-43
UNIPROTKB|A0JM12	1114	megf10 "Multiple epidermal gro	0.992	0.118	0.507	5.7e-43
UNIPROTKB|E1C393	1132	MEGF10 "Uncharacterized protei	0.992	0.116	0.522	7.5e-43
UNIPROTKB|Q96KG7	1140	MEGF10 "Multiple epidermal gro	0.992	0.115	0.507	7.7e-43
UNIPROTKB|F1MAP4	1145	Megf10 "Protein Megf10" [Rattu	0.992	0.115	0.507	7.7e-43
UNIPROTKB|A6BM72	1044	MEGF11 "Multiple epidermal gro	0.992	0.126	0.530	8e-43
MGI|MGI:2685177	1147	Megf10 "multiple EGF-like-doma	0.992	0.115	0.507	9.9e-43
UNIPROTKB|E2RQ32	1150	MEGF10 "Uncharacterized protei	0.992	0.114	0.507	1.3e-42

UNIPROTKB|F1RKL7 MEGF10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 68/131 (51%), Positives = 87/131 (66%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CEE C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEERCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG +C+   G+C C PGW+G+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   235 EQRCPCQNGGVCHHVTGECPCPPGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query:   122 ECQCEPGFKGQ 132
             +C C PG+ G+
Sbjct:   295 QCHCSPGYTGE 305

GO:0055001 "muscle cell development" evidence=IEA

GO:0051147 "regulation of muscle cell differentiation" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0034109 "homotypic cell-cell adhesion" evidence=IEA

GO:0014841 "satellite cell proliferation" evidence=IEA

GO:0014816 "satellite cell differentiation" evidence=IEA

GO:0014719 "satellite cell activation" evidence=IEA

GO:0001891 "phagocytic cup" evidence=IEA

UNIPROTKB|F1MET4 MEGF10 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 472 (171.2 bits), Expect = 1.1e-43, P = 1.1e-43
 Identities = 68/132 (51%), Positives = 88/132 (66%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CEE C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEERCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG +C+   G+C C PGW+G+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   235 EQRCPCQNGGVCHHVTGECSCPPGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query:   122 ECQCEPGFKGQK 133
             +C C PG+ G++
Sbjct:   295 QCHCSPGYTGER 306

GO:0055001 "muscle cell development" evidence=IEA

GO:0051147 "regulation of muscle cell differentiation" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0034109 "homotypic cell-cell adhesion" evidence=IEA

GO:0014841 "satellite cell proliferation" evidence=IEA

GO:0014816 "satellite cell differentiation" evidence=IEA

GO:0014719 "satellite cell activation" evidence=IEA

GO:0001891 "phagocytic cup" evidence=IEA

FB|FBgn0027594 drpr "draper" [Drosophila melanogaster (taxid:7227)]

 Score = 470 (170.5 bits), Expect = 1.4e-43, P = 1.4e-43
 Identities = 68/132 (51%), Positives = 86/132 (65%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  C ++C  G FG NCS++C+C NG +CH  +GEC C PGFTG LC+ RCP G HG  C
Sbjct:   168 GARCADICPEGFFGANCSEKCRCENGGKCHHVSGECQCAPGFTGPLCDMRCPDGKHGAQC 227

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
                C CQN   C P  G C+C PGW G VC   C  G +G GC   CEC+ GA CHH+TG
Sbjct:   228 QQDCPCQNDGKCQPETGACMCNPGWTGDVCANKCPVGSYGPGCQESCECYKGAPCHHITG 287

Query:   122 ECQCEPGFKGQK 133
             +C+C PG++G++
Sbjct:   288 QCECPPGYRGER 299

GO:0007155 "cell adhesion" evidence=ISS

GO:0008345 "larval locomotory behavior" evidence=IMP

GO:0006909 "phagocytosis" evidence=IMP;TAS

GO:0031224 "intrinsic to membrane" evidence=NAS

GO:0005515 "protein binding" evidence=IPI

GO:0016322 "neuron remodeling" evidence=IMP

GO:0035212 "cell competition in a multicellular organism" evidence=IMP

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IGI

GO:0043277 "apoptotic cell clearance" evidence=IMP

GO:0035071 "salivary gland cell autophagic cell death" evidence=IMP

UNIPROTKB|A0JM12 megf10 "Multiple epidermal growth factor-like domains protein 10" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 465 (168.7 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CEE C  G +G +C Q+CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HG  C
Sbjct:   174 GWRCEERCDQGTYGNDCQQKCQCQNGASCDHVTGECRCPPGYTGAFCEDLCPPGKHGSQC 233

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   234 EERCPCQNGGVCHHVTGECSCPAGWMGTVCGQPCPEGRYGRNCSQECQCHNGGTCDSATG 293

Query:   122 ECQCEPGFKGQK 133
             +C C PG+ G++
Sbjct:   294 QCYCSPGYNGER 305

GO:0014719 "satellite cell activation" evidence=ISS

GO:0014816 "satellite cell differentiation" evidence=ISS

GO:0014841 "satellite cell proliferation" evidence=ISS

UNIPROTKB|E1C393 MEGF10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 464 (168.4 bits), Expect = 7.5e-43, P = 7.5e-43
 Identities = 70/134 (52%), Positives = 86/134 (64%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CEE C  G +G +C Q+CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEERCDQGTYGNDCHQKCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWM--GSVCNVPCTPGMWGQGCTVPCECFNGASCHHV 119
               RC CQNG IC+   G+C C PGWM  G VC  PC  G +G  C+  C+C NG  C   
Sbjct:   235 EERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPCPEGRYGNNCSQECQCHNGGICDSA 294

Query:   120 TGECQCEPGFKGQK 133
             TG+C C PG+ G++
Sbjct:   295 TGQCHCSPGYTGER 308

GO:0001891 "phagocytic cup" evidence=IEA

GO:0014719 "satellite cell activation" evidence=IEA

GO:0014816 "satellite cell differentiation" evidence=IEA

GO:0014841 "satellite cell proliferation" evidence=IEA

GO:0034109 "homotypic cell-cell adhesion" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0051147 "regulation of muscle cell differentiation" evidence=IEA

GO:0055001 "muscle cell development" evidence=IEA

UNIPROTKB|Q96KG7 MEGF10 "Multiple epidermal growth factor-like domains protein 10" [Homo sapiens (taxid:9606)]

 Score = 464 (168.4 bits), Expect = 7.7e-43, P = 7.7e-43
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CE+ C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   235 EQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query:   122 ECQCEPGFKGQK 133
             +C C PG+ G++
Sbjct:   295 QCHCSPGYTGER 306

GO:0016021 "integral to membrane" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0001891 "phagocytic cup" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IMP

GO:0014719 "satellite cell activation" evidence=ISS

GO:0014841 "satellite cell proliferation" evidence=ISS

GO:0034109 "homotypic cell-cell adhesion" evidence=IDA

GO:0051147 "regulation of muscle cell differentiation" evidence=IMP

GO:0014816 "satellite cell differentiation" evidence=IMP

GO:0055001 "muscle cell development" evidence=IMP

UNIPROTKB|F1MAP4 Megf10 "Protein Megf10" [Rattus norvegicus (taxid:10116)]

 Score = 464 (168.4 bits), Expect = 7.7e-43, P = 7.7e-43
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CE+ C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPQC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   235 EQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGACDAATG 294

Query:   122 ECQCEPGFKGQK 133
             +C C PG+ G++
Sbjct:   295 QCHCSPGYTGER 306

GO:0001891 "phagocytic cup" evidence=IEA

GO:0014719 "satellite cell activation" evidence=IEA

GO:0014816 "satellite cell differentiation" evidence=IEA

GO:0014841 "satellite cell proliferation" evidence=IEA

GO:0034109 "homotypic cell-cell adhesion" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0051147 "regulation of muscle cell differentiation" evidence=IEA

GO:0055001 "muscle cell development" evidence=IEA

UNIPROTKB|A6BM72 MEGF11 "Multiple epidermal growth factor-like domains protein 11" [Homo sapiens (taxid:9606)]

 Score = 463 (168.0 bits), Expect = 8.0e-43, P = 8.0e-43
 Identities = 70/132 (53%), Positives = 84/132 (63%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CEE+C PG  G+ C   CQCR+GA C P  GEC C PG+TG  CEE CPPG+HG  C
Sbjct:   169 GWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAPGYTGVYCEELCPPGSHGAHC 228

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG  C+   G+C C PGW G+VC  PC PG +GQ C+  C C +G  C HVTG
Sbjct:   229 ELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTG 288

Query:   122 ECQCEPGFKGQK 133
             +C C  G+ G +
Sbjct:   289 QCHCTAGYMGDR 300

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0010842 "retina layer formation" evidence=ISS

GO:0034109 "homotypic cell-cell adhesion" evidence=ISS

MGI|MGI:2685177 Megf10 "multiple EGF-like-domains 10" [Mus musculus (taxid:10090)]

 Score = 463 (168.0 bits), Expect = 9.9e-43, P = 9.9e-43
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CE+ C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPHC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG +C+   G+C C  GWMG+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   235 EQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query:   122 ECQCEPGFKGQK 133
             +C C PG+ G++
Sbjct:   295 QCHCSPGYTGER 306

GO:0001891 "phagocytic cup" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007517 "muscle organ development" evidence=IEA

GO:0014719 "satellite cell activation" evidence=IMP

GO:0014816 "satellite cell differentiation" evidence=ISO;IMP

GO:0014841 "satellite cell proliferation" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0034109 "homotypic cell-cell adhesion" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IMP;IDA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=ISO

GO:0051147 "regulation of muscle cell differentiation" evidence=ISO

GO:0055001 "muscle cell development" evidence=ISO

UNIPROTKB|E2RQ32 MEGF10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 462 (167.7 bits), Expect = 1.3e-42, P = 1.3e-42
 Identities = 67/132 (50%), Positives = 87/132 (65%)

Query:     2 GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
             G  CE+ C  G +G +C Q CQC+NGA C   TGEC C PG+TG+ CE+ CPPG HGP C
Sbjct:   175 GWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC 234

Query:    62 INRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG 121
               RC CQNG IC+   G+C C  GW+G+VC  PC  G +G+ C+  C+C NG +C   TG
Sbjct:   235 EQRCPCQNGGICHHVTGECSCPSGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATG 294

Query:   122 ECQCEPGFKGQK 133
             +C C PG+ G++
Sbjct:   295 QCHCSPGYTGER 306

GO:0055001 "muscle cell development" evidence=IEA

GO:0051147 "regulation of muscle cell differentiation" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

GO:0034109 "homotypic cell-cell adhesion" evidence=IEA

GO:0014841 "satellite cell proliferation" evidence=IEA

GO:0014816 "satellite cell differentiation" evidence=IEA

GO:0014719 "satellite cell activation" evidence=IEA

GO:0001891 "phagocytic cup" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6DIB5	MEG10_MOUSE	No assigned EC number	0.5075	0.9774	0.1133	yes	N/A
Q96KG7	MEG10_HUMAN	No assigned EC number	0.5075	0.6466	0.0754	yes	N/A
A0JM12	MEG10_XENTR	No assigned EC number	0.5075	0.9774	0.1166	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG1225|consensus	525		99.46
KOG0994|consensus	1758		99.4
KOG0994|consensus	1758		99.24
KOG4289|consensus	2531		99.12
KOG1219|consensus	4289		99.08
KOG1225|consensus	525		99.0
KOG4289|consensus	2531		98.81
KOG1219|consensus	4289		98.63
KOG1836|consensus	1705		98.59
KOG1226|consensus	783		98.48
KOG1836|consensus	1705		98.27
smart00051	63	DSL delta serrate ligand.	98.26
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	98.03
KOG1226|consensus	783		97.9
KOG3512|consensus	592		97.9
KOG1218|consensus	316		97.83
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	97.79
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	97.77
smart00051	63	DSL delta serrate ligand.	97.74
KOG4260|consensus	350		97.72
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.68
KOG1217|consensus	487		97.53
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	97.5
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.49
KOG1217|consensus	487		97.3
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.3
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	97.26
KOG1214|consensus	1289		97.22
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	97.18
KOG1218|consensus	316		97.11
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	97.09
KOG3512|consensus	592		97.03
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	97.02
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.74
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	95.9
KOG4260|consensus	350		95.86
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	95.68
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	95.45
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.17
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	95.17
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	94.93
cd00053	36	EGF Epidermal growth factor domain, found in epide	94.81
smart00181	35	EGF Epidermal growth factor-like domain.	94.54
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	94.49
KOG1214|consensus	1289		94.15
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	92.54
PF01683	52	EB: EB module; InterPro: IPR006149 The EB domain h	86.76
PF12662	24	cEGF: Complement Clr-like EGF-like	83.74
KOG0196|consensus	996		83.56
KOG0196|consensus	996		82.98
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	80.18

>KOG1225|consensus

Probab=99.46  E-value=5.5e-13  Score=99.81  Aligned_cols=107  Identities=40%  Similarity=1.120  Sum_probs=78.8

Q ss_pred             ccccCCCCCCCCC-CC--CCCCCCEEecCCCeeecCCCCccCCCCc-cCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCC
Q psy11501          8 VCGPGRFGQNCSQ-EC--QCRNGAECHPATGECSCQPGFTGSLCEE-RCPPGTHGPSCINRCRCQNGAICNPANGQCLCA   83 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~-~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~   83 (133)
                      .|..+|+|..|+. .|  .|.+++.|.  .+.|+|++||+|.+|++ .|+.           .|+.++.+.  .++|+|.
T Consensus       237 ~c~~~~~g~~c~~~~C~~~c~~~g~c~--~G~CIC~~Gf~G~dC~e~~Cp~-----------~cs~~g~~~--~g~CiC~  301 (525)
T KOG1225|consen  237 ECPEGYFGPLCSTIYCPGGCTGRGQCV--EGRCICPPGFTGDDCDELVCPV-----------DCSGGGVCV--DGECICN  301 (525)
T ss_pred             ecCCceeCCccccccCCCCCcccceEe--CCeEeCCCCCcCCCCCcccCCc-----------ccCCCceec--CCEeecC
Confidence            6888899988875 36  366677887  67999999999999985 2332           255555554  4588888


Q ss_pred             CCcccCCCCC------------------CCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccCC
Q psy11501         84 PGWMGSVCNV------------------PCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        84 ~g~~g~~c~~------------------~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      ++|.|..|++                  .|.+||+|..|... .|.+++.|.  ++ |+|..||.|.+
T Consensus       302 ~g~~G~dCs~~~cpadC~g~G~Ci~G~C~C~~Gy~G~~C~~~-~C~~~g~cv--~g-C~C~~Gw~G~d  365 (525)
T KOG1225|consen  302 PGYSGKDCSIRRCPADCSGHGKCIDGECLCDEGYTGELCIQR-ACSGGGQCV--NG-CKCKKGWRGPD  365 (525)
T ss_pred             CCccccccccccCCccCCCCCcccCCceEeCCCCcCCccccc-ccCCCceec--cC-ceeccCccCCC
Confidence            8888887753                  46677777777766 488888884  56 99999998864

>KOG0994|consensus

Probab=99.40  E-value=4e-13  Score=106.15  Aligned_cols=128  Identities=37%  Similarity=0.994  Sum_probs=99.0

Q ss_pred             CCccccccccCCCCCCCCC---CCCCC-----CCCEEecCCCeeecCCCCccCCCCccCCCCCC----CCCCCCCCCCCC
Q psy11501          2 GTHCEEVCGPGRFGQNCSQ---ECQCR-----NGAECHPATGECSCQPGFTGSLCEERCPPGTH----GPSCINRCRCQN   69 (133)
Q Consensus         2 g~~c~~~C~~g~~g~~c~~---~C~C~-----~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~----g~~C~~~~~C~~   69 (133)
                      |.+|+ .|.+||||+.-..   .|.|+     +...|+..+++|.|.++..|..|+ +|++.+|    |..|+. +.|..
T Consensus       997 G~hCe-~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~~~~CDr~tGQCpClpNv~G~~CD-qCA~N~w~laSG~GCe~-C~Cd~ 1073 (1758)
T KOG0994|consen  997 GDHCE-HCKDGFYGDALRQNCQRCVCNFLGTNSTCHCDRFTGQCPCLPNVQGVRCD-QCAENHWNLASGEGCEP-CNCDP 1073 (1758)
T ss_pred             ccchh-hccccchhHHHHhhhhhheccccccCCccccccccCcCCCCccccccccc-ccccchhccccCCCCCc-cCCCc
Confidence            78898 9999999974332   23332     235677889999999999999998 8999887    555653 23443


Q ss_pred             --CCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCC--CCCCCCCCC----eeccCCCceeCCCCCccCC
Q psy11501         70 --GAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCT--VPCECFNGA----SCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        70 --~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~--~~c~C~~~g----~C~~~~g~C~C~~g~~G~~  133 (133)
                        +..|+..+++|+|.+||.|..|. +|.+-|||+.=.  ..|+|+..|    .|+..+|+|.|.+|..|.+
T Consensus      1074 ~~~pqCN~ftGQCqCkpGfGGR~C~-qCqel~WGdP~~~C~aCdCd~rG~~tpQCdr~tG~C~C~~Gv~G~r 1144 (1758)
T KOG0994|consen 1074 IGGPQCNEFTGQCQCKPGFGGRTCS-QCQELYWGDPNEKCRACDCDPRGIETPQCDRATGRCVCRPGVGGPR 1144 (1758)
T ss_pred             cCCccccccccceeccCCCCCcchh-HHHHhhcCCCCCCceecCCCCCCCCCCCccccCCceeecCCCCCcc
Confidence              34688789999999999999999 899999988633  246776644    5888899999999988753

>KOG0994|consensus

Probab=99.24  E-value=1.7e-11  Score=97.26  Aligned_cols=123  Identities=39%  Similarity=0.998  Sum_probs=89.2

Q ss_pred             cccccCCCCCCCCC----------------CCCCCCC------CEEecCCCee-ecCCCCccCCCCccCCCCCCCCCCCC
Q psy11501          7 EVCGPGRFGQNCSQ----------------ECQCRNG------AECHPATGEC-SCQPGFTGSLCEERCPPGTHGPSCIN   63 (133)
Q Consensus         7 ~~C~~g~~g~~c~~----------------~C~C~~~------g~C~~~~~~C-~C~~g~~G~~C~~~C~~g~~g~~C~~   63 (133)
                      ++|.+||.|..|++                .|.|+++      +.|+..++.| .|..-..|.+|+ -|.+||+|..-.+
T Consensus       936 C~C~~GY~G~RCe~CA~~~fGnP~~GGtCq~CeC~~NiD~~d~~aCD~~TG~CLkCL~hTeG~hCe-~Ck~Gf~GdA~~q 1014 (1758)
T KOG0994|consen  936 CHCQEGYSGSRCEICADNHFGNPSEGGTCQKCECSNNIDLYDPGACDVATGACLKCLYHTEGDHCE-HCKDGFYGDALRQ 1014 (1758)
T ss_pred             eecccCccccchhhhcccccCCcccCCccccccccCCcCccCCCccchhhchhhhhhhcccccchh-hccccchhHHHHh
Confidence            35666666665542                3456654      4566668888 588888999998 7999999864222


Q ss_pred             C---CCCCC-----CCeecCCCCeeeCCCCcccCCCCCCCCCCcc----CCCCCCCCCCCC--CCeeccCCCceeCCCCC
Q psy11501         64 R---CRCQN-----GAICNPANGQCLCAPGWMGSVCNVPCTPGMW----GQGCTVPCECFN--GASCHHVTGECQCEPGF  129 (133)
Q Consensus        64 ~---~~C~~-----~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~----g~~c~~~c~C~~--~g~C~~~~g~C~C~~g~  129 (133)
                      .   +.|..     ...|+..+++|.|.+...|.+|+ +|.+.+|    |..|+ +|.|+.  +.+|+..+|+|+|.+||
T Consensus      1015 ~CqrC~Cn~LGTn~~~~CDr~tGQCpClpNv~G~~CD-qCA~N~w~laSG~GCe-~C~Cd~~~~pqCN~ftGQCqCkpGf 1092 (1758)
T KOG0994|consen 1015 NCQRCVCNFLGTNSTCHCDRFTGQCPCLPNVQGVRCD-QCAENHWNLASGEGCE-PCNCDPIGGPQCNEFTGQCQCKPGF 1092 (1758)
T ss_pred             hhhhheccccccCCccccccccCcCCCCccccccccc-ccccchhccccCCCCC-ccCCCccCCccccccccceeccCCC
Confidence            1   22322     24566679999999999999999 8999887    55664 555643  45898889999999999


Q ss_pred             ccC
Q psy11501        130 KGQ  132 (133)
Q Consensus       130 ~G~  132 (133)
                      .|.
T Consensus      1093 GGR 1095 (1758)
T KOG0994|consen 1093 GGR 1095 (1758)
T ss_pred             CCc
Confidence            885

>KOG4289|consensus

Probab=99.12  E-value=1.7e-10  Score=93.45  Aligned_cols=85  Identities=36%  Similarity=0.906  Sum_probs=63.3

Q ss_pred             CCccccccccCCCCCCCCC---CC---CCCCCCEEec--CCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCee
Q psy11501          2 GTHCEEVCGPGRFGQNCSQ---EC---QCRNGAECHP--ATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAIC   73 (133)
Q Consensus         2 g~~c~~~C~~g~~g~~c~~---~C---~C~~~g~C~~--~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C   73 (133)
                      |..|  +|++||+|+.|+.   .|   +|.+++.|..  .+|+|.|.++|+|.+|+..-..+    .|... -|.++++|
T Consensus      1221 glrC--rCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~ag----rCvpG-vC~nggtC 1293 (2531)
T KOG4289|consen 1221 GLRC--RCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAG----RCVPG-VCKNGGTC 1293 (2531)
T ss_pred             ceeE--eCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeecccC----ccccc-eecCCCEE
Confidence            4555  7999999999985   46   7999999985  47899999999999998532221    13222 47888888


Q ss_pred             cCC---CCeeeCCCC-cccCCCCC
Q psy11501         74 NPA---NGQCLCAPG-WMGSVCNV   93 (133)
Q Consensus        74 ~~~---~~~C~C~~g-~~g~~c~~   93 (133)
                      .+.   .+.|.|++| |.+++|+.
T Consensus      1294 ~~~~nggf~c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1294 VNLLNGGFCCHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             eecCCCceeccCCCcccCCCceEE
Confidence            754   567899886 66777764

>KOG1219|consensus

Probab=99.08  E-value=3e-10  Score=95.01  Aligned_cols=97  Identities=31%  Similarity=0.858  Sum_probs=78.6

Q ss_pred             CCCCCCEEecC---CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCC
Q psy11501         23 QCRNGAECHPA---TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTP   97 (133)
Q Consensus        23 ~C~~~g~C~~~---~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~   97 (133)
                      +|.++|+|...   .|.|.|++-|.|.+|+....+      |... ||..+++|...  .+.|.|+.+|+|.+|+..   
T Consensus      3871 pCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~ep------C~sn-PC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~--- 3940 (4289)
T KOG1219|consen 3871 PCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEP------CASN-PCLTGGTCIPFYNGFLCNCPNGYTGKRCEAR--- 3940 (4289)
T ss_pred             cccCCCEecCCCCCceEEeCcccccCccccccccc------ccCC-CCCCCCEEEecCCCeeEeCCCCccCceeecc---
Confidence            79999999843   679999999999999965444      6554 89999999865  789999999999999863   


Q ss_pred             CccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         98 GMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        98 g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      |  -..|+.. +|.++|.|.+..|  .|.|.+||.|.
T Consensus      3941 G--i~eCs~n-~C~~gg~C~n~~gsf~CncT~g~~gr 3974 (4289)
T KOG1219|consen 3941 G--ISECSKN-VCGTGGQCINIPGSFHCNCTPGILGR 3974 (4289)
T ss_pred             c--ccccccc-cccCCceeeccCCceEeccChhHhcc
Confidence            1  1234332 7999999999877  89999999875

>KOG1225|consensus

Probab=99.00  E-value=1.2e-09  Score=82.22  Aligned_cols=71  Identities=41%  Similarity=1.171  Sum_probs=52.4

Q ss_pred             ccccCCCCCCCCC-CCC--CCCCCEEecCCCeeecCCCCccCCCCcc-CCCCCCCCCCCCCCCCCCCCeecCCCCeeeCC
Q psy11501          8 VCGPGRFGQNCSQ-ECQ--CRNGAECHPATGECSCQPGFTGSLCEER-CPPGTHGPSCINRCRCQNGAICNPANGQCLCA   83 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C~--C~~~g~C~~~~~~C~C~~g~~G~~C~~~-C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~   83 (133)
                      +|++||+|.+|++ .|+  |+.++.+.  .++|+|+++|+|..|+++ |+.           .|.++|.|+  .++|.|+
T Consensus       268 IC~~Gf~G~dC~e~~Cp~~cs~~g~~~--~g~CiC~~g~~G~dCs~~~cpa-----------dC~g~G~Ci--~G~C~C~  332 (525)
T KOG1225|consen  268 ICPPGFTGDDCDELVCPVDCSGGGVCV--DGECICNPGYSGKDCSIRRCPA-----------DCSGHGKCI--DGECLCD  332 (525)
T ss_pred             eCCCCCcCCCCCcccCCcccCCCceec--CCEeecCCCccccccccccCCc-----------cCCCCCccc--CCceEeC
Confidence            7999999999988 574  66777776  559999999999999742 221           455666665  5667777


Q ss_pred             CCcccCCCCC
Q psy11501         84 PGWMGSVCNV   93 (133)
Q Consensus        84 ~g~~g~~c~~   93 (133)
                      +||+|..|..
T Consensus       333 ~Gy~G~~C~~  342 (525)
T KOG1225|consen  333 EGYTGELCIQ  342 (525)
T ss_pred             CCCcCCcccc
Confidence            7777776665

>KOG4289|consensus

Probab=98.81  E-value=4.8e-09  Score=85.34  Aligned_cols=83  Identities=39%  Similarity=0.945  Sum_probs=62.9

Q ss_pred             CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCC
Q psy11501         34 TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECF  111 (133)
Q Consensus        34 ~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~  111 (133)
                      +..|.|++||+|++|+...+.      |... +|.+++.|...  .++|.|.++|+|.+|+..-..+    .| .+-.|.
T Consensus      1221 glrCrCPpGFTgd~CeTeiDl------CYs~-pC~nng~C~srEggYtCeCrpg~tGehCEvs~~ag----rC-vpGvC~ 1288 (2531)
T KOG4289|consen 1221 GLRCRCPPGFTGDYCETEIDL------CYSG-PCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAG----RC-VPGVCK 1288 (2531)
T ss_pred             ceeEeCCCCCCcccccchhHh------hhcC-CCCCCCceEEecCceeEEecCCccccceeeecccC----cc-ccceec
Confidence            458999999999999977666      5544 89999999744  7899999999999998621111    22 123689


Q ss_pred             CCCeeccCC-C--ceeCCCC
Q psy11501        112 NGASCHHVT-G--ECQCEPG  128 (133)
Q Consensus       112 ~~g~C~~~~-g--~C~C~~g  128 (133)
                      |+++|.+.. +  .|+|+.|
T Consensus      1289 nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1289 NGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             CCCEEeecCCCceeccCCCc
Confidence            999998752 2  7999987

>KOG1219|consensus

Probab=98.63  E-value=4.4e-08  Score=82.73  Aligned_cols=84  Identities=35%  Similarity=0.857  Sum_probs=68.3

Q ss_pred             CCccccccccCCCCCCCCC---CC---CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCee
Q psy11501          2 GTHCEEVCGPGRFGQNCSQ---EC---QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAIC   73 (133)
Q Consensus         2 g~~c~~~C~~g~~g~~c~~---~C---~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C   73 (133)
                      |..|  .|+..|.|..|+.   +|   ||..+|+|.+.  .+.|.|+.+|+|..|+.+   |  -..|+.. +|.+++.|
T Consensus      3885 gy~C--kCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~~---G--i~eCs~n-~C~~gg~C 3956 (4289)
T KOG1219|consen 3885 GYKC--KCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEAR---G--ISECSKN-VCGTGGQC 3956 (4289)
T ss_pred             ceEE--eCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeecc---c--ccccccc-cccCCcee
Confidence            4455  6999999999985   57   79999999865  678999999999999864   1  0236544 79999999


Q ss_pred             cCC--CCeeeCCCCcccCCCCC
Q psy11501         74 NPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        74 ~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      .+.  .+.|.|.++|.|..|..
T Consensus      3957 ~n~~gsf~CncT~g~~gr~c~~ 3978 (4289)
T KOG1219|consen 3957 INIPGSFHCNCTPGILGRTCCA 3978 (4289)
T ss_pred             eccCCceEeccChhHhcccCcc
Confidence            877  56999999999998764

>KOG1836|consensus

Probab=98.59  E-value=2.5e-07  Score=77.83  Aligned_cols=79  Identities=33%  Similarity=0.896  Sum_probs=62.5

Q ss_pred             CCCCC-CEEecCCCeeecCCCCccCCCCccCCCCCCCCCCC------CCCCCCCCCeecCC----CCeee-CCCCcccCC
Q psy11501         23 QCRNG-AECHPATGECSCQPGFTGSLCEERCPPGTHGPSCI------NRCRCQNGAICNPA----NGQCL-CAPGWMGSV   90 (133)
Q Consensus        23 ~C~~~-g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~------~~~~C~~~~~C~~~----~~~C~-C~~g~~g~~   90 (133)
                      .|..+ .+|+..++.|.|.+...|..|+ +|..||||..-.      ++++|.+++.|...    .+.|. |+++|+|.+
T Consensus       732 ~cngh~~~Cd~~tG~C~C~~~t~G~~C~-~C~~GfYg~~~~~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~r  810 (1705)
T KOG1836|consen  732 DCNGHSNICDPRTGQCKCKHNTFGGQCA-QCVDGFYGLPDLGTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLR  810 (1705)
T ss_pred             ccCCccccccCCCCceecccCCCCCchh-hhcCCCCCccccCCCCCCccCCCCCChhhcCcCcccceecCCCCCCCcccc
Confidence            44443 5788889999999999999998 999999975321      24577777666543    57887 999999999


Q ss_pred             CCCCCCCCccCCC
Q psy11501         91 CNVPCTPGMWGQG  103 (133)
Q Consensus        91 c~~~c~~g~~g~~  103 (133)
                      |+ .|..+|++..
T Consensus       811 Ce-~c~dgyfg~p  822 (1705)
T KOG1836|consen  811 CE-ECADGYFGNP  822 (1705)
T ss_pred             cc-cCCCccccCC
Confidence            99 7999998764

>KOG1226|consensus

Probab=98.48  E-value=1e-06  Score=68.43  Aligned_cols=109  Identities=32%  Similarity=0.905  Sum_probs=69.4

Q ss_pred             ccccCCCCCCCCC------------CC-------CCCCCCEEecCCCeeecCCCCc----cCCCCccCCCCCCCCCCCCC
Q psy11501          8 VCGPGRFGQNCSQ------------EC-------QCRNGAECHPATGECSCQPGFT----GSLCEERCPPGTHGPSCINR   64 (133)
Q Consensus         8 ~C~~g~~g~~c~~------------~C-------~C~~~g~C~~~~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~   64 (133)
                      .|.+||+|..|+-            .|       +|++.|.|.  =|+|.|.+...    |.+|+  |+.    ..|...
T Consensus       481 ~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~--CGqC~C~~~~~~~i~G~fCE--CDn----fsC~r~  552 (783)
T KOG1226|consen  481 RCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCV--CGQCVCHKPDNGKIYGKFCE--CDN----FSCERH  552 (783)
T ss_pred             ecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEe--CCceEecCCCCCceeeeeee--ccC----cccccc
Confidence            6999999998851            13       477777776  67889987766    88886  332    113221


Q ss_pred             --CCCCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCCCC--CCCCCCeeccCCCceeCCCC-CccC
Q psy11501         65 --CRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPC--ECFNGASCHHVTGECQCEPG-FKGQ  132 (133)
Q Consensus        65 --~~C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c--~C~~~g~C~~~~g~C~C~~g-~~G~  132 (133)
                        ..|..+|.|.  -++|+|.+||+|+.|+.  +.  .-..|..+.  .|...|+|  .-++|+|... |.|.
T Consensus       553 ~g~lC~g~G~C~--CG~CvC~~GwtG~~C~C--~~--std~C~~~~G~iCSGrG~C--~Cg~C~C~~~~~sG~  617 (783)
T KOG1226|consen  553 KGVLCGGHGRCE--CGRCVCNPGWTGSACNC--PL--STDTCESSDGQICSGRGTC--ECGRCKCTDPPYSGE  617 (783)
T ss_pred             cCcccCCCCeEe--CCcEEcCCCCccCCCCC--CC--CCccccCCCCceeCCCcee--eCCceEcCCCCcCcc
Confidence              2477777776  78999999999999964  21  111222211  35556666  3567777654 6664

>KOG1836|consensus

Probab=98.27  E-value=7.4e-06  Score=69.32  Aligned_cols=126  Identities=37%  Similarity=0.979  Sum_probs=93.7

Q ss_pred             CCccccccccCCCCCCCC----CC---CCCCCC------CEEecCCCeeecCCCCccCCCCccCCCCCCCCC----CCCC
Q psy11501          2 GTHCEEVCGPGRFGQNCS----QE---CQCRNG------AECHPATGECSCQPGFTGSLCEERCPPGTHGPS----CINR   64 (133)
Q Consensus         2 g~~c~~~C~~g~~g~~c~----~~---C~C~~~------g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~----C~~~   64 (133)
                      |.+|+ .|.++|+|+.-.    ..   |.|...      .+|.+.+++|.|.+...|..|. .|.+++++..    |.. 
T Consensus       865 g~~cd-~c~~g~~gd~l~~~p~~~c~~c~c~p~gs~~~~~~c~~~tGQcec~~~v~g~~c~-~c~~g~fnl~s~~gC~~-  941 (1705)
T KOG1836|consen  865 GEYCD-LCKEGYFGDPLAPNPEDKCFACGCVPAGSELPSLTCNPVTGQCECKPNVEGRDCL-YCFKGFFNLNSGVGCEP-  941 (1705)
T ss_pred             ccccc-ccccCccccccCCCcCCccccccCccCCcccccccCCCcccceeccCCCCccccc-cccccccccCCCCCccc-
Confidence            67788 999999998654    22   333322      3577779999999999999997 8999998765    321 


Q ss_pred             CCCCCC----CeecCCCCeeeCCCCcccCCCCCCCCCCccCC---CCCCCCCCCCCC----eeccCCCceeCCCCCccC
Q psy11501         65 CRCQNG----AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQ---GCTVPCECFNGA----SCHHVTGECQCEPGFKGQ  132 (133)
Q Consensus        65 ~~C~~~----~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~---~c~~~c~C~~~g----~C~~~~g~C~C~~g~~G~  132 (133)
                      +.|...    ..|+..+++|.|.++.+|.+|. +|.+.+++.   .|. .|.|...|    .|+..+|+|.|.+++.|.
T Consensus       942 c~c~~~gs~~~~c~~~tGqc~c~~gVtgqrc~-qc~~~~~~~~~~gc~-~c~c~~~Gs~~~qc~~~~G~c~c~~~~~g~ 1018 (1705)
T KOG1836|consen  942 CNCDPTGSESSDCDVGTGQCYCRPGVTGQRCD-QCETYHFGFQTEGCG-LCECDPLGSRGFQCDPEDGQCPCRPGFEGR 1018 (1705)
T ss_pred             ccccccccccccccccCCceeeecCccccccC-ccccCcccccccCCc-ceecccCCcccceecccCCeeeecCCCCCc
Confidence            234332    3677779999999999999999 788776654   332 35666554    688889999999999874

>smart00051 DSL delta serrate ligand

Probab=98.26  E-value=6.9e-07  Score=49.16  Aligned_cols=44  Identities=23%  Similarity=0.682  Sum_probs=36.0

Q ss_pred             ccccccccCCCCCCCCCCCCC----CCCCEEecCCCeeecCCCCccCCC
Q psy11501          4 HCEEVCGPGRFGQNCSQECQC----RNGAECHPATGECSCQPGFTGSLC   48 (133)
Q Consensus         4 ~c~~~C~~g~~g~~c~~~C~C----~~~g~C~~~~~~C~C~~g~~G~~C   48 (133)
                      .+...|+++|+|..|+..|..    ..+.+|+. .+.+.|.+||+|+.|
T Consensus        16 ~~rv~C~~~~yG~~C~~~C~~~~d~~~~~~Cd~-~G~~~C~~Gw~G~~C   63 (63)
T smart00051       16 QIRVTCDENYYGEGCNKFCRPRDDFFGHYTCDE-NGNKGCLEGWMGPYC   63 (63)
T ss_pred             EEEeeCCCCCcCCccCCEeCcCccccCCccCCc-CCCEecCCCCcCCCC
Confidence            344579999999999988854    56678875 789999999999876

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=98.03  E-value=1e-05  Score=42.47  Aligned_cols=31  Identities=48%  Similarity=1.237  Sum_probs=27.3

Q ss_pred             EEecCCCeeecCCCCccCCCCccCCCCCCCCC
Q psy11501         29 ECHPATGECSCQPGFTGSLCEERCPPGTHGPS   60 (133)
Q Consensus        29 ~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~   60 (133)
                      .|+..+++|.|.++|+|..|+ .|.++|++..
T Consensus        13 ~C~~~~G~C~C~~~~~G~~C~-~C~~g~~~~~   43 (50)
T cd00055          13 QCDPGTGQCECKPNTTGRRCD-RCAPGYYGLP   43 (50)
T ss_pred             cccCCCCEEeCCCcCCCCCCC-CCCCCCccCC
Confidence            487778999999999999998 8999998753

>KOG1226|consensus

Probab=97.90  E-value=7.9e-05  Score=58.30  Aligned_cols=87  Identities=30%  Similarity=0.786  Sum_probs=53.5

Q ss_pred             CCeeecCCCCccCCCCccCCCCCCCC-----CCCCC---CCCCCCCeecCCCCeeeCCCCcc----cCCCCCCCCCCccC
Q psy11501         34 TGECSCQPGFTGSLCEERCPPGTHGP-----SCINR---CRCQNGAICNPANGQCLCAPGWM----GSVCNVPCTPGMWG  101 (133)
Q Consensus        34 ~~~C~C~~g~~G~~C~~~C~~g~~g~-----~C~~~---~~C~~~~~C~~~~~~C~C~~g~~----g~~c~~~c~~g~~g  101 (133)
                      =|.|.|.+||.|+.|+  |+.+-+..     .|...   -.|+..|.|.  =++|+|.+...    |..|+.  ..    
T Consensus       477 CG~C~C~~G~~G~~CE--C~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~--CGqC~C~~~~~~~i~G~fCEC--Dn----  546 (783)
T KOG1226|consen  477 CGQCRCDEGWLGKKCE--CSTDELSSSEEEDKCRENSDSPVCSGRGDCV--CGQCVCHKPDNGKIYGKFCEC--DN----  546 (783)
T ss_pred             ecceecCCCCCCCccc--CCccccCcHhHHhhccCCCCCCCcCCCCcEe--CCceEecCCCCCceeeeeeec--cC----
Confidence            3689999999999997  55432222     12211   1477777775  67888877665    666653  10    


Q ss_pred             CCCCCC--CCCCCCCeeccCCCceeCCCCCccC
Q psy11501        102 QGCTVP--CECFNGASCHHVTGECQCEPGFKGQ  132 (133)
Q Consensus       102 ~~c~~~--c~C~~~g~C~~~~g~C~C~~g~~G~  132 (133)
                      ..|...  -.|.++|+|  .-|+|+|.+||+|.
T Consensus       547 fsC~r~~g~lC~g~G~C--~CG~CvC~~GwtG~  577 (783)
T KOG1226|consen  547 FSCERHKGVLCGGHGRC--ECGRCVCNPGWTGS  577 (783)
T ss_pred             cccccccCcccCCCCeE--eCCcEEcCCCCccC
Confidence            112111  036667777  45788888888885

>KOG3512|consensus

Probab=97.90  E-value=0.0001  Score=54.93  Aligned_cols=100  Identities=31%  Similarity=0.783  Sum_probs=68.3

Q ss_pred             CCCccccccccCCCCCCCCC----------CCCCCCCCE-E------ec-----CCCee-ecCCCCccCCCCccCCCCCC
Q psy11501          1 MGTHCEEVCGPGRFGQNCSQ----------ECQCRNGAE-C------HP-----ATGEC-SCQPGFTGSLCEERCPPGTH   57 (133)
Q Consensus         1 ~g~~c~~~C~~g~~g~~c~~----------~C~C~~~g~-C------~~-----~~~~C-~C~~g~~G~~C~~~C~~g~~   57 (133)
                      +|+-|+ .|.+.|+...-..          .|.|..++. |      ..     +.+.| .|..+..|.+|. -|.+||+
T Consensus       304 aGPdCg-rCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~SggvClnCrHnTaGrhCh-yCreGyy  381 (592)
T KOG3512|consen  304 AGPDCG-RCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCH-YCREGYY  381 (592)
T ss_pred             CCCCcc-cccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCccccceEeecccCCCCcccc-cccCccc
Confidence            467777 8888887653221          234544332 2      11     13567 599999999997 8999998


Q ss_pred             CCCCCC--------CCCCCC----CCeecCCCCeeeCCCCcccCCCCCCCCCCccCCC
Q psy11501         58 GPSCIN--------RCRCQN----GAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQG  103 (133)
Q Consensus        58 g~~C~~--------~~~C~~----~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~  103 (133)
                      .+.-..        .+.|..    +-+|++.+++|.|.+|-+|..|. .|.+||.-..
T Consensus       382 Rd~s~pl~hrkaCk~CdChpVGs~gktCNq~tGqCpCkeGvtG~tCn-rCa~gyqqsr  438 (592)
T KOG3512|consen  382 RDGSKPLTHRKACKACDCHPVGSAGKTCNQTTGQCPCKEGVTGLTCN-RCAPGYQQSR  438 (592)
T ss_pred             cCCCCCCchhhhhhhcCCcccccccccccccCCcccCCCCCcccccc-cccchhhccc
Confidence            654321        123433    34687789999999999999999 7999997443

>KOG1218|consensus

Probab=97.83  E-value=0.00028  Score=50.46  Aligned_cols=108  Identities=37%  Similarity=0.905  Sum_probs=67.2

Q ss_pred             ccCCCCCCCCCCCCCCCC---CEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCc
Q psy11501         10 GPGRFGQNCSQECQCRNG---AECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGW   86 (133)
Q Consensus        10 ~~g~~g~~c~~~C~C~~~---g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~   86 (133)
                      ..+|.|..|...+++...   -+|.+....|.+..+|.+..|..   ++|+|..|...+  .....+......|.|.+||
T Consensus        96 ~~~~~g~~C~~~~~~~~~c~~~~C~~~~~~c~~~~~~~~~~C~~---~~~~g~~C~~~c--~~~~~~~~~~~~c~c~~g~  170 (316)
T KOG1218|consen   96 LNGYEGPQCESPCPCGDGCAEKTCANPRRECRCGGGYIGEQCGE---ENLVGLKCQRDC--QCTGGCDCKNGICTCQPGF  170 (316)
T ss_pred             CCCCCcccccCCCCcCCcccccccCCCccceecCCcCccccccc---cCCCCCCccCCC--CCccccCCCCCceeccCCc
Confidence            466777777776665543   45554333678888888888863   678888888765  2233444447788999999


Q ss_pred             ccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCC
Q psy11501         87 MGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPG  128 (133)
Q Consensus        87 ~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g  128 (133)
                      .+..+...+..      |...+.+.+++.|+...+.+.+.+.
T Consensus       171 ~g~~~~~~~~~------c~~~~~~~~g~~C~~~~~~~~~~~~  206 (316)
T KOG1218|consen  171 VGVFCVESCSG------CSPLTACENGAKCNRSTGSCLCYPG  206 (316)
T ss_pred             ccccccccCCC------cCCCcccCCCCeeeccccccccCCC
Confidence            99988754321      2233345555566555444444333

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=97.79  E-value=4.4e-05  Score=39.30  Aligned_cols=30  Identities=50%  Similarity=1.301  Sum_probs=27.0

Q ss_pred             CEEecCCCeeecCCCCccCCCCccCCCCCCC
Q psy11501         28 AECHPATGECSCQPGFTGSLCEERCPPGTHG   58 (133)
Q Consensus        28 g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g   58 (133)
                      ..|+..+++|.|+++|+|..|+ +|+++|+|
T Consensus        11 ~~C~~~~G~C~C~~~~~G~~C~-~C~~g~~g   40 (46)
T smart00180       11 GTCDPDTGQCECKPNVTGRRCD-RCAPGYYG   40 (46)
T ss_pred             CcccCCCCEEECCCCCCCCCCC-cCCCCcCC
Confidence            4677778999999999999998 89999998

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=97.77  E-value=8.6e-06  Score=42.52  Aligned_cols=33  Identities=45%  Similarity=1.185  Sum_probs=27.2

Q ss_pred             CEEecCCCeeecCCCCccCCCCccCCCCCCCCCC
Q psy11501         28 AECHPATGECSCQPGFTGSLCEERCPPGTHGPSC   61 (133)
Q Consensus        28 g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C   61 (133)
                      ..|+..+++|.|.++|+|+.|+ +|.++|++...
T Consensus        11 ~~C~~~~G~C~C~~~~~G~~C~-~C~~g~~~~~~   43 (49)
T PF00053_consen   11 QTCDPSTGQCVCKPGTTGPRCD-QCKPGYFGLPS   43 (49)
T ss_dssp             SSEEETCEEESBSTTEESTTS--EE-TTEECSTT
T ss_pred             CcccCCCCEEeccccccCCcCc-CCCCccccccC
Confidence            4788889999999999999998 79999988643

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>smart00051 DSL delta serrate ligand

Probab=97.74  E-value=2.5e-05  Score=42.94  Aligned_cols=43  Identities=28%  Similarity=0.714  Sum_probs=29.0

Q ss_pred             CCCCCCCCCccCCCCCCCCC----CCCCCeeccCCCceeCCCCCccCC
Q psy11501         90 VCNVPCTPGMWGQGCTVPCE----CFNGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        90 ~c~~~c~~g~~g~~c~~~c~----C~~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      .+...|.++|+|..|...|.    ...+.+|+. .|.++|++||+|.+
T Consensus        16 ~~rv~C~~~~yG~~C~~~C~~~~d~~~~~~Cd~-~G~~~C~~Gw~G~~   62 (63)
T smart00051       16 QIRVTCDENYYGEGCNKFCRPRDDFFGHYTCDE-NGNKGCLEGWMGPY   62 (63)
T ss_pred             EEEeeCCCCCcCCccCCEeCcCccccCCccCCc-CCCEecCCCCcCCC
Confidence            33445555555555554443    466788975 68999999999974

>KOG4260|consensus

Probab=97.72  E-value=5.8e-05  Score=52.57  Aligned_cols=49  Identities=37%  Similarity=1.034  Sum_probs=40.1

Q ss_pred             ccccCCCCCCCCCCC------CCCCCCEEec-----CCCeeecCCCCccCCCCccCCCCCCC
Q psy11501          8 VCGPGRFGQNCSQEC------QCRNGAECHP-----ATGECSCQPGFTGSLCEERCPPGTHG   58 (133)
Q Consensus         8 ~C~~g~~g~~c~~~C------~C~~~g~C~~-----~~~~C~C~~g~~G~~C~~~C~~g~~g   58 (133)
                      -|+.|-||.+|.. |      +|+.+|.|.-     +++.|.|.+||+|+.|. .|.++|+-
T Consensus       131 CCp~gtyGpdCl~-Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~-~Cg~eyfe  190 (350)
T KOG4260|consen  131 CCPDGTYGPDCLQ-CPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCR-YCGIEYFE  190 (350)
T ss_pred             ccCCCCcCCcccc-CCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCcccc-ccchHHHH
Confidence            4899999999853 4      5888888862     36899999999999998 88888763

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.68  E-value=6.8e-05  Score=35.51  Aligned_cols=26  Identities=35%  Similarity=0.993  Sum_probs=22.7

Q ss_pred             CCCCCCEEecCCCeeecCCCCccCCC
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGSLC   48 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~~C   48 (133)
                      .|+++|+|+...++|+|.++|+|+.|
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCCC
Confidence            47889999866799999999999876

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1217|consensus

Probab=97.53  E-value=0.0013  Score=49.12  Aligned_cols=121  Identities=40%  Similarity=1.010  Sum_probs=77.0

Q ss_pred             ccccCCCCCCCCC---CC-----CCCCCCEEecC--CCeeecCCCCccCCCCcc-------------CCCCCCCCCCCCC
Q psy11501          8 VCGPGRFGQNCSQ---EC-----QCRNGAECHPA--TGECSCQPGFTGSLCEER-------------CPPGTHGPSCINR   64 (133)
Q Consensus         8 ~C~~g~~g~~c~~---~C-----~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~-------------C~~g~~g~~C~~~   64 (133)
                      .|..+|.+..+..   .|     .|.+.+.|.+.  .+.|.|+++|.+..++..             +..++.+..|...
T Consensus       155 ~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~  234 (487)
T KOG1217|consen  155 SCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVS  234 (487)
T ss_pred             eeCCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccc
Confidence            6899999887763   34     37777788754  468999999999988743             3344555444432


Q ss_pred             -CCCCCC-CeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCC--CceeCCCCCccC
Q psy11501         65 -CRCQNG-AICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT--GECQCEPGFKGQ  132 (133)
Q Consensus        65 -~~C~~~-~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~--g~C~C~~g~~G~  132 (133)
                       ..+... +.|.+.  .++|.++++|.+..+. .+.   ....|...-.|.++++|.+..  ..|.|+++|+|.
T Consensus       235 ~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~~-~~~---~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~  304 (487)
T KOG1217|consen  235 IVECASGDGTCVNTVGSYTCRCPEGYTGDACV-TCV---DVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGR  304 (487)
T ss_pred             cccccCCCCcccccCCceeeeCCCCccccccc-eee---eccccCCCCccCCCCeeecCCCcceeeCCCCCCCC
Confidence             123322 566544  4688888888887630 000   011222211377788998765  489999999986

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=97.50  E-value=0.00022  Score=37.30  Aligned_cols=31  Identities=42%  Similarity=1.119  Sum_probs=27.1

Q ss_pred             eecCCCCeeeCCCCcccCCCCCCCCCCccCCC
Q psy11501         72 ICNPANGQCLCAPGWMGSVCNVPCTPGMWGQG  103 (133)
Q Consensus        72 ~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~  103 (133)
                      .|+..+++|.|.++|.|.+|+ +|.++|++..
T Consensus        13 ~C~~~~G~C~C~~~~~G~~C~-~C~~g~~~~~   43 (50)
T cd00055          13 QCDPGTGQCECKPNTTGRRCD-RCAPGYYGLP   43 (50)
T ss_pred             cccCCCCEEeCCCcCCCCCCC-CCCCCCccCC
Confidence            476668999999999999999 8999998764

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.49  E-value=0.00014  Score=34.44  Aligned_cols=25  Identities=28%  Similarity=0.857  Sum_probs=22.0

Q ss_pred             CCCCCCeeccCCCceeCCCCCccCC
Q psy11501        109 ECFNGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus       109 ~C~~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      .|.++|+|+...++|+|.+||+|+.
T Consensus         7 ~C~~~G~C~~~~g~C~C~~g~~G~~   31 (32)
T PF07974_consen    7 ICSGHGTCVSPCGRCVCDSGYTGPD   31 (32)
T ss_pred             ccCCCCEEeCCCCEEECCCCCcCCC
Confidence            5889999987779999999999974

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1217|consensus

Probab=97.30  E-value=0.003  Score=47.23  Aligned_cols=119  Identities=37%  Similarity=0.937  Sum_probs=77.2

Q ss_pred             ccccCCCCCCCCCC--CCC-----CCCCEEecC-----CCeeecCCCCccCCCCccCCCCCCCCCCCC-CCCCCCCCeec
Q psy11501          8 VCGPGRFGQNCSQE--CQC-----RNGAECHPA-----TGECSCQPGFTGSLCEERCPPGTHGPSCIN-RCRCQNGAICN   74 (133)
Q Consensus         8 ~C~~g~~g~~c~~~--C~C-----~~~g~C~~~-----~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~-~~~C~~~~~C~   74 (133)
                      .|+.||.+..+...  |.-     ...+.|...     .+.|.|..+|.+..++.....      |.. ...|.+++.|.
T Consensus       113 ~c~~g~~~~~~~~~~~C~~~~~~~~~~~~c~~~~~~~~~~~c~C~~g~~~~~~~~~~~~------C~~~~~~c~~~~~C~  186 (487)
T KOG1217|consen  113 TCPPGYQGTPCEGECECVTGPGVCCIDGSCSNGPGSVGPFRCSCTEGYEGEPCETDLDE------CIQYSSPCQNGGTCV  186 (487)
T ss_pred             eCCCccccCcCCcceeecCCCCCeeCchhhcCCCCCCCceeeeeCCCcccccccccccc------cccCCCCcCCCcccc
Confidence            58889999888763  521     233445432     467899999999888743222      442 22477777886


Q ss_pred             CC--CCeeeCCCCcccCCCCCC-------------CCCCccCCCCCCC-CCCCCC-CeeccCCC--ceeCCCCCccC
Q psy11501         75 PA--NGQCLCAPGWMGSVCNVP-------------CTPGMWGQGCTVP-CECFNG-ASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        75 ~~--~~~C~C~~g~~g~~c~~~-------------c~~g~~g~~c~~~-c~C~~~-g~C~~~~g--~C~C~~g~~G~  132 (133)
                      +.  .+.|.|+++|.+..++..             +.+++.+..+... ..+... ++|.+..+  +|.|+++|.+.
T Consensus       187 ~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~  263 (487)
T KOG1217|consen  187 NTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVECASGDGTCVNTVGSYTCRCPEGYTGD  263 (487)
T ss_pred             cCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccccccCCCCcccccCCceeeeCCCCcccc
Confidence            55  468999999999887642             3445555555432 234433 77876543  79999999875

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.30  E-value=8.5e-05  Score=35.19  Aligned_cols=25  Identities=40%  Similarity=1.242  Sum_probs=21.5

Q ss_pred             CCCCCCeeccCC-C--ceeCCCCCccCC
Q psy11501        109 ECFNGASCHHVT-G--ECQCEPGFKGQK  133 (133)
Q Consensus       109 ~C~~~g~C~~~~-g--~C~C~~g~~G~~  133 (133)
                      +|.++|+|.... .  +|+|++||+|++
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            789999998765 3  899999999975

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=97.26  E-value=0.00012  Score=38.10  Aligned_cols=33  Identities=42%  Similarity=1.181  Sum_probs=26.6

Q ss_pred             CeecCCCCeeeCCCCcccCCCCCCCCCCccCCCC
Q psy11501         71 AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGC  104 (133)
Q Consensus        71 ~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c  104 (133)
                      ..|+..+++|.|.++|.|++|+ +|.++|++...
T Consensus        11 ~~C~~~~G~C~C~~~~~G~~C~-~C~~g~~~~~~   43 (49)
T PF00053_consen   11 QTCDPSTGQCVCKPGTTGPRCD-QCKPGYFGLPS   43 (49)
T ss_dssp             SSEEETCEEESBSTTEESTTS--EE-TTEECSTT
T ss_pred             CcccCCCCEEeccccccCCcCc-CCCCccccccC
Confidence            4677778999999999999999 79999997653

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>KOG1214|consensus

Probab=97.22  E-value=0.0015  Score=52.08  Aligned_cols=116  Identities=30%  Similarity=0.838  Sum_probs=65.1

Q ss_pred             ccccCCCCC--CCCC--CC-----CCCCCCEEecC--CCeeecCCCCc--cC--CCCccCCCCCCCCCCCCC-CCCCCCC
Q psy11501          8 VCGPGRFGQ--NCSQ--EC-----QCRNGAECHPA--TGECSCQPGFT--GS--LCEERCPPGTHGPSCINR-CRCQNGA   71 (133)
Q Consensus         8 ~C~~g~~g~--~c~~--~C-----~C~~~g~C~~~--~~~C~C~~g~~--G~--~C~~~C~~g~~g~~C~~~-~~C~~~~   71 (133)
                      .|..+|.|+  .|.+  +|     .|..+..|.+.  +++|.|..+|.  ++  .|...-++. --+.|+.. ..|...+
T Consensus       719 ecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pa-p~n~Ce~g~h~C~i~g  797 (1289)
T KOG1214|consen  719 ECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPA-PANPCEDGSHTCAIAG  797 (1289)
T ss_pred             EEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCC-CCCccccCccccCcCC
Confidence            366667654  4554  23     47778888753  66777776663  33  343211110 01123322 1233323


Q ss_pred             e--ecCC---CCeeeCCCCcccCC--CCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         72 I--CNPA---NGQCLCAPGWMGSV--CNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        72 ~--C~~~---~~~C~C~~g~~g~~--c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .  |+..   ++.|.|.+||.|+-  |..       ++.|. +-.|...++|.+..+  .|.|.+||.|+
T Consensus       798 ~a~c~~hGgs~y~C~CLPGfsGDG~~c~d-------vDeC~-psrChp~A~CyntpgsfsC~C~pGy~GD  859 (1289)
T KOG1214|consen  798 QARCVHHGGSTYSCACLPGFSGDGHQCTD-------VDECS-PSRCHPAATCYNTPGSFSCRCQPGYYGD  859 (1289)
T ss_pred             ceEEEecCCceEEEeecCCccCCcccccc-------ccccC-ccccCCCceEecCCCcceeecccCccCC
Confidence            2  3222   67888888888752  221       12232 226778899988766  89999999986

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=97.18  E-value=0.00058  Score=35.07  Aligned_cols=30  Identities=43%  Similarity=1.213  Sum_probs=26.4

Q ss_pred             CeecCCCCeeeCCCCcccCCCCCCCCCCccC
Q psy11501         71 AICNPANGQCLCAPGWMGSVCNVPCTPGMWG  101 (133)
Q Consensus        71 ~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g  101 (133)
                      ..|+..+++|.|+++++|.+|+ +|.++|++
T Consensus        11 ~~C~~~~G~C~C~~~~~G~~C~-~C~~g~~g   40 (46)
T smart00180       11 GTCDPDTGQCECKPNVTGRRCD-RCAPGYYG   40 (46)
T ss_pred             CcccCCCCEEECCCCCCCCCCC-cCCCCcCC
Confidence            3566668999999999999999 89999998

>KOG1218|consensus

Probab=97.11  E-value=0.0074  Score=43.13  Aligned_cols=66  Identities=42%  Similarity=1.044  Sum_probs=38.1

Q ss_pred             cccc-CCCCCCCCCCCCCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeee
Q psy11501          8 VCGP-GRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCL   81 (133)
Q Consensus         8 ~C~~-g~~g~~c~~~C~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~   81 (133)
                      +|.+ +|+|..|...|.  ....+....+.|.|.+||.|..+...+..      |.....+.+++.|+...+.+.
T Consensus       136 ~C~~~~~~g~~C~~~c~--~~~~~~~~~~~c~c~~g~~g~~~~~~~~~------c~~~~~~~~g~~C~~~~~~~~  202 (316)
T KOG1218|consen  136 QCGEENLVGLKCQRDCQ--CTGGCDCKNGICTCQPGFVGVFCVESCSG------CSPLTACENGAKCNRSTGSCL  202 (316)
T ss_pred             cccccCCCCCCccCCCC--CccccCCCCCceeccCCcccccccccCCC------cCCCcccCCCCeeeccccccc
Confidence            4444 777777776662  22334445778889999999888754332      333334444445554433333

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=97.09  E-value=0.00026  Score=26.56  Aligned_cols=13  Identities=54%  Similarity=1.502  Sum_probs=8.1

Q ss_pred             eeecCCCCccCCC
Q psy11501         36 ECSCQPGFTGSLC   48 (133)
Q Consensus        36 ~C~C~~g~~G~~C   48 (133)
                      +|+|++||+|.+|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            3677777777665

>KOG3512|consensus

Probab=97.03  E-value=0.0037  Score=46.91  Aligned_cols=109  Identities=28%  Similarity=0.747  Sum_probs=70.5

Q ss_pred             CCCCCCC-EEec---CCCeeecCCCCccCCCCccCCCCCCCCC----CCCC------CCCCC-------CCeecCC----
Q psy11501         22 CQCRNGA-ECHP---ATGECSCQPGFTGSLCEERCPPGTHGPS----CINR------CRCQN-------GAICNPA----   76 (133)
Q Consensus        22 C~C~~~g-~C~~---~~~~C~C~~g~~G~~C~~~C~~g~~g~~----C~~~------~~C~~-------~~~C~~~----   76 (133)
                      |.|+.++ .|.-   ...+|.|..+.+|+.|. +|.+-|+...    -...      +.|..       +..+...    
T Consensus       278 CKCNgHAs~Cv~d~~~~ltCdC~HNTaGPdCg-rCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~  356 (592)
T KOG3512|consen  278 CKCNGHASRCVMDESSHLTCDCEHNTAGPDCG-RCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRR  356 (592)
T ss_pred             eeecCccceeeeccCCceEEecccCCCCCCcc-cccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCcc
Confidence            5666554 4542   24689999999999998 8988665321    1110      12221       1112111    


Q ss_pred             -CCee-eCCCCcccCCCCCCCCCCccCCCCCC--------CCCCCC----CCeeccCCCceeCCCCCccC
Q psy11501         77 -NGQC-LCAPGWMGSVCNVPCTPGMWGQGCTV--------PCECFN----GASCHHVTGECQCEPGFKGQ  132 (133)
Q Consensus        77 -~~~C-~C~~g~~g~~c~~~c~~g~~g~~c~~--------~c~C~~----~g~C~~~~g~C~C~~g~~G~  132 (133)
                       -++| .|.....|.+|. .|.+||+-+.-..        .|.|+.    +-+|+..+|+|.|.+|.+|.
T Consensus       357 SggvClnCrHnTaGrhCh-yCreGyyRd~s~pl~hrkaCk~CdChpVGs~gktCNq~tGqCpCkeGvtG~  425 (592)
T KOG3512|consen  357 SGGVCLNCRHNTAGRHCH-YCREGYYRDGSKPLTHRKACKACDCHPVGSAGKTCNQTTGQCPCKEGVTGL  425 (592)
T ss_pred             ccceEeecccCCCCcccc-cccCccccCCCCCCchhhhhhhcCCcccccccccccccCCcccCCCCCccc
Confidence             2455 688888999999 7999998543221        245654    45898889999999999885

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=97.02  E-value=0.00016  Score=39.77  Aligned_cols=40  Identities=38%  Similarity=0.883  Sum_probs=23.8

Q ss_pred             ccccCCCCCCCCCCCCC----CCCCEEecCCCeeecCCCCccCCC
Q psy11501          8 VCGPGRFGQNCSQECQC----RNGAECHPATGECSCQPGFTGSLC   48 (133)
Q Consensus         8 ~C~~g~~g~~c~~~C~C----~~~g~C~~~~~~C~C~~g~~G~~C   48 (133)
                      .|.+.|||..|...|.=    ..+-+|+ ..|.-+|.+||+|+.|
T Consensus        20 ~C~~nyyG~~C~~~C~~~~d~~ghy~Cd-~~G~~~C~~Gw~G~~C   63 (63)
T PF01414_consen   20 VCDENYYGPNCSKFCKPRDDSFGHYTCD-SNGNKVCLPGWTGPNC   63 (63)
T ss_dssp             ---TTEETTTT-EE---EEETTEEEEE--SS--EEE-TTEESTTS
T ss_pred             ECCCCCCCccccCCcCCCcCCcCCcccC-CCCCCCCCCCCcCCCC
Confidence            79999999999987732    2345776 4788999999999876

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.74  E-value=0.00052  Score=32.42  Aligned_cols=25  Identities=40%  Similarity=0.929  Sum_probs=20.8

Q ss_pred             CCCCCCeecCC---CCeeeCCCCcccCC
Q psy11501         66 RCQNGAICNPA---NGQCLCAPGWMGSV   90 (133)
Q Consensus        66 ~C~~~~~C~~~---~~~C~C~~g~~g~~   90 (133)
                      +|.++++|.+.   .++|.|++||.|++
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            78899999754   57999999999864

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=95.90  E-value=0.013  Score=28.23  Aligned_cols=27  Identities=44%  Similarity=1.159  Sum_probs=20.6

Q ss_pred             CCCCCCEEecC--CCeeecCCCCc-cCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFT-GSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~-G~~C~   49 (133)
                      +|.++++|.+.  .+.|.|+++|. |..|+
T Consensus        10 ~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179       10 PCQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            46677788754  56899999998 87764

>KOG4260|consensus

Probab=95.86  E-value=0.011  Score=41.60  Aligned_cols=52  Identities=33%  Similarity=0.903  Sum_probs=33.9

Q ss_pred             cCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecC-----CCCeeeCCCCcccCCCCCCCCCCc
Q psy11501         39 CQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNP-----ANGQCLCAPGWMGSVCNVPCTPGM   99 (133)
Q Consensus        39 C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~-----~~~~C~C~~g~~g~~c~~~c~~g~   99 (133)
                      |++|..|++|. .|+-+-      .. +|...|.|+.     .+++|.|.+||+|+.|. .|.++|
T Consensus       132 Cp~gtyGpdCl-~Cpggs------er-~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~-~Cg~ey  188 (350)
T KOG4260|consen  132 CPDGTYGPDCL-QCPGGS------ER-PCFGNGSCHGDGSREGSGKCKCETGYTGPLCR-YCGIEY  188 (350)
T ss_pred             cCCCCcCCccc-cCCCCC------cC-CcCCCCcccCCCCCCCCCcccccCCCCCcccc-ccchHH
Confidence            66666677765 555321      11 4666667753     27899999999999987 344433

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=95.68  E-value=0.026  Score=27.14  Aligned_cols=27  Identities=41%  Similarity=1.058  Sum_probs=20.5

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcc-cCCCC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWM-GSVCN   92 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~-g~~c~   92 (133)
                      +|.+++.|.+.  .+.|.|+++|. |.+|+
T Consensus        10 ~C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179       10 PCQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            57777788755  67899999998 77663

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=95.45  E-value=0.024  Score=26.90  Aligned_cols=27  Identities=48%  Similarity=1.184  Sum_probs=20.4

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~   49 (133)
                      +|.+++.|.+.  .+.|.|+++|.|..|+
T Consensus        10 ~C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054          10 PCQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            46667788754  5689999999997764

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.17  E-value=0.036  Score=25.85  Aligned_cols=26  Identities=42%  Similarity=1.141  Sum_probs=20.1

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccC-CC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGS-LC   48 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~-~C   48 (133)
                      +|.+++.|.+.  .+.|.|+.+|.|. .|
T Consensus         7 ~C~~~~~C~~~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           7 PCSNGGTCVNTPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCEEecCCCCeEeECCCCCcccCCc
Confidence            46667888754  6789999999988 54

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=95.17  E-value=0.05  Score=25.76  Aligned_cols=27  Identities=41%  Similarity=1.067  Sum_probs=20.0

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      +|.+++.|.+.  .+.|.|+++|.|..|+
T Consensus        10 ~C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054          10 PCQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            56666777654  5789999999887663

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=94.93  E-value=0.012  Score=28.54  Aligned_cols=24  Identities=38%  Similarity=1.165  Sum_probs=17.4

Q ss_pred             CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501        109 ECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus       109 ~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|...++|.+..+  +|+|++||.|+
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred             CCCCCcEeecCCCCEEeECCCCCccC
Confidence            5777889988655  89999999986

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=94.81  E-value=0.072  Score=24.73  Aligned_cols=26  Identities=38%  Similarity=1.138  Sum_probs=19.6

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccC-CC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGS-VC   91 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~-~c   91 (133)
                      +|.+++.|.+.  .++|.|+.+|.|. .|
T Consensus         7 ~C~~~~~C~~~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           7 PCSNGGTCVNTPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCEEecCCCCeEeECCCCCcccCCc
Confidence            56666777654  6789999999887 44

>smart00181 EGF Epidermal growth factor-like domain

Probab=94.54  E-value=0.061  Score=25.29  Aligned_cols=24  Identities=50%  Similarity=1.259  Sum_probs=17.9

Q ss_pred             CCCCCEEecC--CCeeecCCCCcc-CCC
Q psy11501         24 CRNGAECHPA--TGECSCQPGFTG-SLC   48 (133)
Q Consensus        24 C~~~g~C~~~--~~~C~C~~g~~G-~~C   48 (133)
                      |.++ .|.+.  .+.|.|++||.| ..|
T Consensus         8 C~~~-~C~~~~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        8 CSNG-TCINTPGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCC-EEECCCCCeEeECCCCCccCCcc
Confidence            5555 77654  678999999999 655

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=94.49  E-value=0.0084  Score=32.91  Aligned_cols=21  Identities=29%  Similarity=0.741  Sum_probs=13.2

Q ss_pred             CCCeeccCCCceeCCCCCccCC
Q psy11501        112 NGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus       112 ~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      .+.+|+ ..|.-+|.+||+|++
T Consensus        42 ghy~Cd-~~G~~~C~~Gw~G~~   62 (63)
T PF01414_consen   42 GHYTCD-SNGNKVCLPGWTGPN   62 (63)
T ss_dssp             EEEEE--SS--EEE-TTEESTT
T ss_pred             CCcccC-CCCCCCCCCCCcCCC
Confidence            456787 478899999999974

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>KOG1214|consensus

Probab=94.15  E-value=0.066  Score=43.32  Aligned_cols=51  Identities=35%  Similarity=0.846  Sum_probs=36.3

Q ss_pred             CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501         34 TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSV   90 (133)
Q Consensus        34 ~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~   90 (133)
                      +|.|.|.+||.|+-=  .|..   +..|... .|....+|.+.  ++.|.|.+||.|+-
T Consensus       808 ~y~C~CLPGfsGDG~--~c~d---vDeC~ps-rChp~A~CyntpgsfsC~C~pGy~GDG  860 (1289)
T KOG1214|consen  808 TYSCACLPGFSGDGH--QCTD---VDECSPS-RCHPAATCYNTPGSFSCRCQPGYYGDG  860 (1289)
T ss_pred             eEEEeecCCccCCcc--cccc---ccccCcc-ccCCCceEecCCCcceeecccCccCCC
Confidence            679999999998742  1111   1236543 68888888766  78999999999863

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=92.54  E-value=0.062  Score=26.76  Aligned_cols=22  Identities=32%  Similarity=1.097  Sum_probs=18.9

Q ss_pred             CCCCCCeeccCCC--ceeCCCCCc
Q psy11501        109 ECFNGASCHHVTG--ECQCEPGFK  130 (133)
Q Consensus       109 ~C~~~g~C~~~~g--~C~C~~g~~  130 (133)
                      .|...++|+++.|  +|.|++||.
T Consensus        11 ~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen   11 NCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSSTTSEEEEETTEEEEEESTTEE
T ss_pred             cCCCCCEEEcCCCCEEeeCCCCcE
Confidence            5777899999766  899999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function

Probab=86.76  E-value=1.4  Score=22.81  Aligned_cols=21  Identities=48%  Similarity=1.358  Sum_probs=16.9

Q ss_pred             CCCCCCeeccCCCceeCCCCCcc
Q psy11501        109 ECFNGASCHHVTGECQCEPGFKG  131 (133)
Q Consensus       109 ~C~~~g~C~~~~g~C~C~~g~~G  131 (133)
                      .|..+..|  ..++|.|++||+-
T Consensus        27 qC~~~s~C--~~g~C~C~~g~~~   47 (52)
T PF01683_consen   27 QCIGGSVC--VNGRCQCPPGYVE   47 (52)
T ss_pred             CCCCcCEE--cCCEeECCCCCEe
Confidence            67777888  5689999999864

It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=83.74  E-value=0.98  Score=19.71  Aligned_cols=11  Identities=36%  Similarity=1.071  Sum_probs=8.6

Q ss_pred             CCeeeCCCCcc
Q psy11501         77 NGQCLCAPGWM   87 (133)
Q Consensus        77 ~~~C~C~~g~~   87 (133)
                      +++|.|++||.
T Consensus         1 sy~C~C~~Gy~   11 (24)
T PF12662_consen    1 SYTCSCPPGYQ   11 (24)
T ss_pred             CEEeeCCCCCc
Confidence            36788888887

>KOG0196|consensus

Probab=83.56  E-value=2.1  Score=35.10  Aligned_cols=63  Identities=25%  Similarity=0.705  Sum_probs=37.2

Q ss_pred             CCCCCeecCCCCeeeCCCCcc----cCCCCCCCCCCccCCCC-CCCC-CCCCCCeecc-CCCceeCCCCCc
Q psy11501         67 CQNGAICNPANGQCLCAPGWM----GSVCNVPCTPGMWGQGC-TVPC-ECFNGASCHH-VTGECQCEPGFK  130 (133)
Q Consensus        67 C~~~~~C~~~~~~C~C~~g~~----g~~c~~~c~~g~~g~~c-~~~c-~C~~~g~C~~-~~g~C~C~~g~~  130 (133)
                      |...|......+.|.|.+||.    +..|+ .|++|++-..- ...| +|..+..-.. ....|.|..||.
T Consensus       248 C~~dGeWlvpiG~C~C~aGye~~~~~~~C~-aCp~G~yK~~~~~~~C~~CP~~S~s~~ega~~C~C~~gyy  317 (996)
T KOG0196|consen  248 CSGDGEWLVPIGGCVCKAGYEEAENGKACQ-ACPPGTYKASQGDSLCLPCPPNSHSSSEGATSCTCENGYY  317 (996)
T ss_pred             EcCCCcEEEEcCceeecCCCCcccCCCcce-eCCCCcccCCCCCCCCCCCCCCCCCCCCCCCcccccCCcc
Confidence            444444444478999999996    56788 79999874432 1223 3433322111 122788888875

>KOG0196|consensus

Probab=82.98  E-value=2.6  Score=34.60  Aligned_cols=63  Identities=30%  Similarity=0.789  Sum_probs=37.0

Q ss_pred             CCCCCEEecCCCeeecCCCCc----cCCCCccCCCCCCCCCC-CCCC-CCCCCCeec-CCCCeeeCCCCcc
Q psy11501         24 CRNGAECHPATGECSCQPGFT----GSLCEERCPPGTHGPSC-INRC-RCQNGAICN-PANGQCLCAPGWM   87 (133)
Q Consensus        24 C~~~g~C~~~~~~C~C~~g~~----G~~C~~~C~~g~~g~~C-~~~~-~C~~~~~C~-~~~~~C~C~~g~~   87 (133)
                      |+..|.-....|.|.|.+||.    +..|+ .|+.|+|-..- ...| +|..+..-. .....|.|..||.
T Consensus       248 C~~dGeWlvpiG~C~C~aGye~~~~~~~C~-aCp~G~yK~~~~~~~C~~CP~~S~s~~ega~~C~C~~gyy  317 (996)
T KOG0196|consen  248 CSGDGEWLVPIGGCVCKAGYEEAENGKACQ-ACPPGTYKASQGDSLCLPCPPNSHSSSEGATSCTCENGYY  317 (996)
T ss_pred             EcCCCcEEEEcCceeecCCCCcccCCCcce-eCCCCcccCCCCCCCCCCCCCCCCCCCCCCCcccccCCcc
Confidence            333333333368999999994    67887 89999874322 1111 343332221 2255788888876

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=80.18  E-value=2.3  Score=26.67  Aligned_cols=17  Identities=35%  Similarity=0.882  Sum_probs=14.7

Q ss_pred             CCeeecCCCCccCCCCc
Q psy11501         34 TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        34 ~~~C~C~~g~~G~~C~~   50 (133)
                      ...|.|..||+|..|+.
T Consensus        66 ~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         66 GMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             CceeECCCCcccccccc
Confidence            56899999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	133
2gy5_A	423	Tie2 Ligand-Binding Domain Crystal Structure Length		1e-15

>pdb|2GY5|A Chain A, Tie2 Ligand-Binding Domain Crystal Structure Length = 423

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 9   CGPGRFGQNCSQECQ-CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRC 67
           C   ++G  C+  C  C N   CH  TGEC C PGF G  CE+ C   T G +C  RC  
Sbjct: 189 CEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSG 248
Query: 68  QNG----AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGEC 123
           Q G      C P    C CA GW G  CN  C PG +G  C + C C NG  C    G C
Sbjct: 249 QEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-C 307
Query: 124 QCEPGFKG 131
            C PG++G
Sbjct: 308 LCSPGWQG 315

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	133
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	6e-21
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	1e-17
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	2e-14
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	1e-05
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	8e-15
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	3e-14
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	3e-09
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	7e-08
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	2e-05
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	2e-13
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	1e-11
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	6e-10
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	1e-08
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	4e-08
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-10
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	2e-09
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	4e-07
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	1e-05
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	3e-05
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	5e-08
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	8e-07
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-05
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	6e-07
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	7e-07
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	4e-04
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	1e-06
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	2e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	2e-05
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	9e-05
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	3e-05
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	8e-04
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	4e-05
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	1e-04
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	7e-04

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 85.9 bits (212), Expect = 6e-21
 Identities = 52/137 (37%), Positives = 63/137 (45%), Gaps = 6/137 (4%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQ-CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGP 59
                   C   ++G  C+  C  C N   CH  TGEC C PGF G  CE+ C   T G 
Sbjct: 181 FTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGR 240

Query: 60  SCINRC----RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGAS 115
           +C  RC     C++   C P    C CA GW G  CN  C PG +G  C + C C NG  
Sbjct: 241 TCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEM 300

Query: 116 CHHVTGECQCEPGFKGQ 132
           C    G C C PG++G 
Sbjct: 301 CDRFQG-CLCSPGWQGL 316

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 76.3 bits (187), Expect = 1e-17
 Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 5/132 (3%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQ----CRNGAECHPATGECSCQPGFTGSLCEERCPPGT 56
           MG  CE+ C    FG+ C + C     C++   C P    CSC  G+ G  C E C PG 
Sbjct: 225 MGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGF 284

Query: 57  HGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASC 116
           +GP C  RC C NG +C+   G CLC+PGW G  C     P M  +   +P      +  
Sbjct: 285 YGPDCKLRCSCNNGEMCDRFQG-CLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGK 343

Query: 117 HHVTGECQCEPG 128
            +   +    P 
Sbjct: 344 FNPICKASGWPL 355

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 67.8 bits (165), Expect = 2e-14
 Identities = 34/136 (25%), Positives = 45/136 (33%), Gaps = 6/136 (4%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSC 61
                    P     +         G       G       FT  L   RC     GP C
Sbjct: 140 IHSVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTR-LIVRRCEAQKWGPEC 198

Query: 62  INRCR-CQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCE----CFNGASC 116
            + C  C N  +C+   G+C+C PG+MG  C   C    +G+ C   C     C +   C
Sbjct: 199 NHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC 258

Query: 117 HHVTGECQCEPGFKGQ 132
                 C C  G+KG 
Sbjct: 259 LPDPYGCSCATGWKGL 274

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 23/95 (24%), Positives = 28/95 (29%), Gaps = 2/95 (2%)

Query: 39  CQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPG 98
            + G           P        +      G       G  L    +   +    C   
Sbjct: 134 YKNGSFIHSVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTR-LIVRRCEAQ 192

Query: 99  MWGQGCTVPC-ECFNGASCHHVTGECQCEPGFKGQ 132
            WG  C   C  C N   CH  TGEC C PGF G+
Sbjct: 193 KWGPECNHLCTACMNNGVCHEDTGECICPPGFMGR 227

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 69.0 bits (168), Expect = 8e-15
 Identities = 31/134 (23%), Positives = 42/134 (31%), Gaps = 10/134 (7%)

Query: 4   HCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN 63
                C      Q      +C NG       G C C PG+ GS CE  C    + PS  +
Sbjct: 428 QVTFDCDCACQAQAEPNSHRCNNG-NGTFECGVCRCGPGWLGSQCE--CSEEDYRPSQQD 484

Query: 64  RCRCQNGAIC-----NPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHH 118
            C  + G            GQC+C     G +    C    +         C     C  
Sbjct: 485 ECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC-- 542

Query: 119 VTGECQCEPGFKGQ 132
             G+C C+  + G 
Sbjct: 543 SCGDCLCDSDWTGY 556

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 67.0 bits (163), Expect = 3e-14
 Identities = 31/137 (22%), Positives = 40/137 (29%), Gaps = 14/137 (10%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAEC-----HPATGECSCQPGFTGSLCEERCPPGT 56
           G+ CE  C    +  +   EC  R G            G+C C     G +  + C    
Sbjct: 468 GSQCE--CSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDD 525

Query: 57  HGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASC 116
                     C     C+   G CLC   W G  CN             + C       C
Sbjct: 526 FSCVRYKGEMCSGHGQCS--CGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC 583

Query: 117 HHVTGECQC-EPGFKGQ 132
               G C C +PG  G 
Sbjct: 584 ----GSCVCIQPGSYGD 596

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 52.8 bits (126), Expect = 3e-09
 Identities = 27/147 (18%), Positives = 37/147 (25%), Gaps = 23/147 (15%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G    + C    F     +   C    +C    G+C C   +TG  C       T   S
Sbjct: 513 FGKITGKYCECDDFSCVRYKGEMCSGHGQCS--CGDCLCDSDWTGYYCNCTTRTDTCMSS 570

Query: 61  CINRCRCQNGAICNPANGQCLC-APGWMGSVCN---------------VPCTPGMWGQGC 104
               C  +    C    G C+C  PG  G  C                V C     G   
Sbjct: 571 NGLLCSGRGKCEC----GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALH 626

Query: 105 TVPCECFNGASCHHVTGECQCEPGFKG 131
                C         + +   + G   
Sbjct: 627 DENT-CNRYCRDEIESVKELKDTGKDA 652

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 48.9 bits (116), Expect = 7e-08
 Identities = 30/133 (22%), Positives = 41/133 (30%), Gaps = 12/133 (9%)

Query: 9   CGPGRFGQNCSQECQCR-NGAECHPATGECSCQPGFTGSLCEE---RCPPGTHGPSCINR 64
           C   + G   S   + +  G              GF  SL  +    C       +  N 
Sbjct: 386 CMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNS 445

Query: 65  CRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHH-----V 119
            RC NG       G C C PGW+GS C   C+   +       C    G          +
Sbjct: 446 HRCNNGN-GTFECGVCRCGPGWLGSQCE--CSEEDYRPSQQDECSPREGQPVCSQRGECL 502

Query: 120 TGECQCEPGFKGQ 132
            G+C C     G+
Sbjct: 503 CGQCVCHSSDFGK 515

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 24/114 (21%), Positives = 31/114 (27%), Gaps = 10/114 (8%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSC-QPGFTGSLCEERC---PPGT 56
            G +C           +    C  R   EC    G C C QPG  G  CE+        T
Sbjct: 554 TGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSYGDTCEKCPTCPDACT 609

Query: 57  HGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCEC 110
               C+   +   GA+ +     C                 G     CT   E 
Sbjct: 610 FKKECVECKKFDRGALHD--ENTCNRYCRDEIESVKELKDTGKDAVNCTYKNED 661

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 64.7 bits (157), Expect = 2e-13
 Identities = 33/150 (22%), Positives = 47/150 (31%), Gaps = 19/150 (12%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCE----------ER 51
             +  E C     G      C            G+C C+    G  C+            
Sbjct: 374 DPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAE 433

Query: 52  CPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTV----P 107
            P G    +C        G  C+   G C C     G  C+  C P  WG    +    P
Sbjct: 434 DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ-CLPQHWGLSNDLDGCRP 492

Query: 108 CECFNGAS----CHHVTGECQCEPGFKGQK 133
           C+C  G +    C   +G+C C P   G++
Sbjct: 493 CDCDLGGALNNSCSEDSGQCSCLPHMIGRQ 522

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 28/144 (19%), Positives = 36/144 (25%), Gaps = 22/144 (15%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
           +     + C     G+NC Q                  C+P          C     G  
Sbjct: 340 VSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEP----------CTCDPAGSE 389

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECF--------- 111
               C            GQC C     G  C+  C  G +      P  C          
Sbjct: 390 NGGICDGYTDFSVGLIAGQCRCKLHVEGERCD-VCKEGFYDLSAEDPYGCKSCACNPLGT 448

Query: 112 --NGASCHHVTGECQCEPGFKGQK 133
              G  C   TG C C+    GQ+
Sbjct: 449 IPGGNPCDSETGYCYCKRLVTGQR 472

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 54.7 bits (131), Expect = 6e-10
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 10/125 (8%)

Query: 9   CGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQ 68
                   N  ++C C   +             G       + C   T G +C       
Sbjct: 305 RPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFY 364

Query: 69  NGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPG 128
                       LC           PCT    G      C+ +   S   + G+C+C+  
Sbjct: 365 FQHPERDIRDPNLC----------EPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLH 414

Query: 129 FKGQK 133
            +G++
Sbjct: 415 VEGER 419

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 17/116 (14%), Positives = 26/116 (22%), Gaps = 9/116 (7%)

Query: 22  CQCRNGAECHPATGECSCQPGFTGSLCEERCP---------PGTHGPSCINRCRCQNGAI 72
               N        G C C+    G  CE                   +   +C C   + 
Sbjct: 266 VDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSS 325

Query: 73  CNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPG 128
               +     A G +       C     G+ C      +       +     CEP 
Sbjct: 326 SCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPC 381

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 49.7 bits (118), Expect = 4e-08
 Identities = 26/94 (27%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 7   EVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN--- 63
                G     C+       G  C   TG C C+   TG  C ++C P   G S      
Sbjct: 432 AEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRC-DQCLPQHWGLSNDLDGC 490

Query: 64  -RCRCQN----GAICNPANGQCLCAPGWMGSVCN 92
             C C         C+  +GQC C P  +G  CN
Sbjct: 491 RPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 56.6 bits (136), Expect = 1e-10
 Identities = 31/138 (22%), Positives = 41/138 (29%), Gaps = 12/138 (8%)

Query: 2   GTHCEEVCGPGRFGQNCSQECQCRNGAECH-----PATGECSCQPGFTGSLCE--ERCPP 54
           G +CE     GR  Q     C+  N +           G+C C            + C  
Sbjct: 456 GKNCECQT-QGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCEC 514

Query: 55  GTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGA 114
            T      N   C          G+C C PG+ GS C   C     G       EC    
Sbjct: 515 DTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQ--CERTTEGCLNPRRVECSGRG 572

Query: 115 SCHHVTGECQCEPGFKGQ 132
            C      C+C  G++  
Sbjct: 573 RC--RCNVCECHSGYQLP 588

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 32/138 (23%), Positives = 43/138 (31%), Gaps = 12/138 (8%)

Query: 5   CEEVCGPGRFGQNCSQECQCRNGAECH----PATGECSCQPGFTGSLCEERCPPGTHGPS 60
            + V         C    Q R+ + CH       G C C  G+ G  CE +   G     
Sbjct: 412 TDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQT-QGRSSQE 470

Query: 61  CINRCRCQNGAIC-----NPANGQCLCAPGWMGSVCN--VPCTPGMWGQGCTVPCECFNG 113
               CR  N +I      +   GQCLC    +         C              C   
Sbjct: 471 LEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGP 530

Query: 114 ASCHHVTGECQCEPGFKG 131
                  G+C+C PGF+G
Sbjct: 531 GRGLCFCGKCRCHPGFEG 548

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 20/133 (15%), Positives = 30/133 (22%), Gaps = 23/133 (17%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
            G+ C+  C     G    +  +C     C      C C  G+   LC+E          
Sbjct: 547 EGSACQ--CERTTEGCLNPRRVECSGRGRCR--CNVCECHSGYQLPLCQECP---GCPSP 599

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVT 120
           C     C                 G  G  C+  C              C          
Sbjct: 600 CGKYISCAEC---------LKFEKGPFGKNCSAACPGLQLSNNPVKGRTC-------KER 643

Query: 121 GECQCEPGFKGQK 133
               C   +  ++
Sbjct: 644 DSEGCWVAYTLEQ 656

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 12/100 (12%), Positives = 24/100 (24%), Gaps = 8/100 (8%)

Query: 8   VCGPGRFGQNCSQECQCRNGAECHPATGE-CSCQPGFTGSLCEERCPPGTHGPSCINRCR 66
            C  G     C +   C +    + +  E    + G  G  C   CP      + +    
Sbjct: 580 ECHSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRT 639

Query: 67  CQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTV 106
           C+             C   +     +      ++      
Sbjct: 640 CKE-------RDSEGCWVAYTLEQQDGMDRYLIYVDESRE 672

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 41.2 bits (96), Expect = 3e-05
 Identities = 23/118 (19%), Positives = 32/118 (27%), Gaps = 8/118 (6%)

Query: 8   VCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRC 67
           +  P  F    +     +  +    A G            CE RC          +R  C
Sbjct: 383 INVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRC-----RDQSRDRSLC 437

Query: 68  QNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQC 125
                     G C C  G++G  C      G   Q     C   N +      G+C C
Sbjct: 438 HGKGFLE--CGICRCDTGYIGKNCECQT-QGRSSQELEGSCRKDNNSIICSGLGDCVC 492

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 49.1 bits (117), Expect = 5e-08
 Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 26/134 (19%)

Query: 2   GTHCEEVCGPGRFGQNCSQEC---QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHG 58
           G    +      F + C Q      CRNG  C+     C C  GF G  CE+        
Sbjct: 130 GNTILKTPQNAIFFKTCQQAECPGGCRNGGFCN-ERRICECPDGFHGPHCEKALCT---- 184

Query: 59  PSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHH 118
                  RC NG +C    G C+C PG+ G  C+                 CFNG +C +
Sbjct: 185 ------PRCMNGGLCV-TPGFCICPPGFYGVNCDKANC----------STTCFNGGTCFY 227

Query: 119 VTGECQCEPGFKGQ 132
             G+C C PG +G+
Sbjct: 228 -PGKCICPPGLEGE 240

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 45.6 bits (108), Expect = 8e-07
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 26/128 (20%)

Query: 8   VCGPGRFGQNCSQEC---QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINR 64
           +C PG +G NC +      C NG  C    G+C C PG  G  CE    P          
Sbjct: 200 ICPPGFYGVNCDKANCSTTCFNGGTCF-YPGKCICPPGLEGEQCEISKCP---------- 248

Query: 65  CRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQ 124
             C+NG  C     +C C+ G+ G +C+ P               C    +CH    +CQ
Sbjct: 249 QPCRNGGKCI-GKSKCKCSKGYQGDLCSKPVC----------EPGCGAHGTCHE-PNKCQ 296

Query: 125 CEPGFKGQ 132
           C+ G+ G+
Sbjct: 297 CQEGWHGR 304

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 28/138 (20%), Positives = 34/138 (24%), Gaps = 18/138 (13%)

Query: 1   MGTHCEEVCGPGRFGQNC---SQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTH 57
           M      V   G              C    +   A           G+   +       
Sbjct: 83  MADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILKTPQNAIF 142

Query: 58  GPSCINRC---RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGA 114
             +C        C+NG  CN     C C  G+ G  C                  C NG 
Sbjct: 143 FKTCQQAECPGGCRNGGFCN-ERRICECPDGFHGPHCEKALC----------TPRCMNGG 191

Query: 115 SCHHVTGECQCEPGFKGQ 132
            C    G C C PGF G 
Sbjct: 192 LCVT-PGFCICPPGFYGV 208

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 46.1 bits (108), Expect = 6e-07
 Identities = 29/139 (20%), Positives = 41/139 (29%), Gaps = 20/139 (14%)

Query: 3   THCEEVCGPGRFGQNCSQECQCRNGAECHPA-TGECS----------CQPGFTGSLCEER 51
           +HC++VC        C+ E  C     CH    G CS          C+  +    C E 
Sbjct: 186 SHCQKVCPTICKSHGCTAEGLC-----CHSECLGNCSQPDDPTKCVACRNFYLDGRCVET 240

Query: 52  CPPGT---HGPSCINRCRCQNG-AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVP 107
           CPP         C+N   CQ+    C  +  Q         + C   C  G       + 
Sbjct: 241 CPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLL 300

Query: 108 CECFNGASCHHVTGECQCE 126
           C    G            +
Sbjct: 301 CTPCLGPCPKVCHLLEGEK 319

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 46.1 bits (108), Expect = 7e-07
 Identities = 19/110 (17%), Positives = 26/110 (23%), Gaps = 10/110 (9%)

Query: 1   MGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPS 60
           +      +    +  QN      C+N  +C      C          C+  C P    P 
Sbjct: 31  LSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLF--PK 88

Query: 61  CINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCEC 110
               C       C       L   G     C  P     +   C   CE 
Sbjct: 89  KSYECLTS----CEFLKYILLVKQGD----CPAPEKASGFAAACVESCEV 130

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 19/107 (17%), Positives = 26/107 (24%), Gaps = 10/107 (9%)

Query: 27  GAECHPATGECSCQPGFTGSLCEERC---------PPGTHGPSCINRCRCQNGAICNPAN 77
           GA       E         + C  RC             H  +  +   CQN   C+   
Sbjct: 5   GAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCL 64

Query: 78  GQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCEC-FNGASCHHVTGEC 123
             C  +       C   C P    +       C F         G+C
Sbjct: 65  EPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDC 111

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 25/127 (19%), Positives = 36/127 (28%), Gaps = 21/127 (16%)

Query: 8   VCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCE-ERCPPGTHGPSCINRC- 65
            C     G +C +  +   G    P +      P   G+               C N   
Sbjct: 316 ECEHNTTGPDCGKCKKNYQGRPWSPGS----YLPIPKGAANACIPSISSIGTNVCDNELL 371

Query: 66  RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQC 125
            CQNG  C+  N +CLC   + G +C                  C    SC   +G+   
Sbjct: 372 HCQNGGTCHN-NVRCLCPAAYTGILCE--------------KLRCEEAGSCGSDSGQGAP 416

Query: 126 EPGFKGQ 132
             G    
Sbjct: 417 PHGTHHH 423

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 15/84 (17%)

Query: 5   CEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINR 64
           C             ++   C+NG  CH     C C   +TG LCE              +
Sbjct: 354 CIPSISSIGTNVCDNELLHCQNGGTCHN-NVRCLCPAAYTGILCE--------------K 398

Query: 65  CRCQNGAICNPANGQCLCAPGWMG 88
            RC+    C   +GQ     G   
Sbjct: 399 LRCEEAGSCGSDSGQGAPPHGTHH 422

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 32/121 (26%)

Query: 24  CRNGAECHPATG--ECSCQPGFTGSLCEERCPPGTHGPSCINRCR---CQNGAICNPANG 78
           C +  +C    G  EC C  G+TG  CE            +N C    CQN A C    G
Sbjct: 15  CEHAGKCINTLGSFECQCLQGYTGPRCEID----------VNECVSNPCQNDATCLDQIG 64

Query: 79  --QCLCAPGWMGSVCNV---PCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKG 131
             QC+C PG+ G  C V    C              C +   C       +C+C  GF G
Sbjct: 65  EFQCICMPGYEGVHCEVNTDECASSP----------CLHNGRCLDKINEFQCECPTGFTG 114

Query: 132 Q 132
            
Sbjct: 115 H 115

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 23/96 (23%)

Query: 9   CGPGRFGQNCSQ---ECQ---CRNGAECHPATG--ECSCQPGFTGSLCEERCPPGTHGPS 60
           C  G  G  C     EC    C+N A C    G  +C C PG+ G  CE           
Sbjct: 32  CLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN--------- 82

Query: 61  CINRCR---CQNGAICNPANG--QCLCAPGWMGSVC 91
             + C    C +   C       QC C  G+ G +C
Sbjct: 83  -TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLC 117

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 35/153 (22%), Positives = 47/153 (30%), Gaps = 35/153 (22%)

Query: 8   VCGPGRFGQNCSQECQCR---NGAECHPATGECSCQPGFTGSLCEE-------------- 50
            C    +G  C++ C+ R    G       G  +C  G+ G  C                
Sbjct: 20  TCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSC 79

Query: 51  ------RCPPGTHGPSCINRCR--CQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQ 102
                 RC  G  G  C            ICN    QCLC   W G +C+          
Sbjct: 80  KLPGDCRCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCDKDLNY----- 133

Query: 103 GCTVPCECFNGASCHHV---TGECQCEPGFKGQ 132
            C     C NG +C +      +C C  G+ G 
Sbjct: 134 -CGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGP 165

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 21/109 (19%)

Query: 24  CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCA 83
             +           +C   + G  C + C P               G      NG   C 
Sbjct: 7   HHHHGSIE-GRSAVTCDDYYYGFGCNKFCRP----------RDDFFGHYACDQNGNKTCM 55

Query: 84  PGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQ 132
            GWMG  CN           C   C      SC  + G+C+C+ G++G 
Sbjct: 56  EGWMGPECNRAI--------CRQGC-SPKHGSC-KLPGDCRCQYGWQGL 94

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 39.7 bits (93), Expect = 4e-05
 Identities = 29/132 (21%), Positives = 37/132 (28%), Gaps = 33/132 (25%)

Query: 24  CRNGAECHPATGE----CSCQPGFTGSLCEERCPPGTHGPSCINRCR-----CQNGAICN 74
           C NG  C P   +    C C  GFT   C       +      +        C NG  C 
Sbjct: 8   CENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCE 67

Query: 75  PANG---------QCLCAPGWMGSVCNV---PCTPGMWGQGCTVPCECFNGASCHHVTG- 121
            +            C C  G+ G  C      C              C NG  C  +   
Sbjct: 68  ISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEP----------CKNGGICTDLVAN 117

Query: 122 -ECQCEPGFKGQ 132
             C+C   F G+
Sbjct: 118 YSCECPGEFMGR 129

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 15/70 (21%)

Query: 23  QCRNGAECHPATGECSCQPGFTGSLCEE-RCPPGTHGPSCINRCRCQNGAICNPANGQCL 81
            CRNG      TG+C C PG+ G  C   +C P            C++G +C   N +CL
Sbjct: 398 LCRNGYCT--PTGKCCCSPGWEGDFCRTAKCEPA-----------CRHGGVCVRPN-KCL 443

Query: 82  CAPGWMGSVC 91
           C  G++G  C
Sbjct: 444 CKKGYLGPQC 453

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 26/122 (21%), Positives = 32/122 (26%), Gaps = 22/122 (18%)

Query: 5   CEEVCGPGRFGQNCSQEC------QCRNGAECHPATG--ECSCQPGFTGSLCEERCPPGT 56
             E             +        C NG  C       EC CQ GF G  CE       
Sbjct: 31  VFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDA---- 86

Query: 57  HGPSCINRCRCQNGAICNPANG-QCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGAS 115
                I   RC+        +   C C  G+  +     C P        VP  C   + 
Sbjct: 87  --TCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKP-------AVPFPCGRVSV 137

Query: 116 CH 117
            H
Sbjct: 138 SH 139

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	133
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.89
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	99.75
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	99.68
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.63
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.61
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.59
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.47
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.43
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.4
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	99.36
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.33
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.28
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.2
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.19
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.14
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.14
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.12
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.12
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	99.04
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.95
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.9
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.9
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.86
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.75
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.73
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.67
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.65
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	98.61
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	98.6
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.58
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.53
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.48
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	98.44
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.32
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.23
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	98.15
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.14
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.07
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.06
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.05
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.05
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.03
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.01
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.97
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.96
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.95
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.9
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.88
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.86
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.8
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.79
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	97.75
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.75
2vh0_B	134	Activated factor XA light chain; serine protease,	97.73
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.68
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.62
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.52
2vh0_B	134	Activated factor XA light chain; serine protease,	97.47
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.47
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.46
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.45
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.41
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.39
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.31
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.26
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.21
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.13
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.13
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.11
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.01
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.0
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	96.99
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.97
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.93
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.92
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.86
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	96.85
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.82
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	96.8
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	96.77
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.65
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.61
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.53
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.51
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.5
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	96.47
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	96.19
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	96.1
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	96.1
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	95.97
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	95.59
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.18
3v65_B	386	Low-density lipoprotein receptor-related protein;	94.55
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	94.13
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	93.99
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.87
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	93.84
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	93.63
3v65_B	386	Low-density lipoprotein receptor-related protein;	93.28
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.26
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	93.25
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	93.13
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	92.8
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.66
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.29
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	92.15
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	92.06
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	92.01
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	91.92
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.66
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	90.16
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	89.59
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	88.89
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	87.83
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	87.09
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	86.14
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	85.27
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	83.87
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	83.73
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	80.22

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.89  E-value=2.3e-23  Score=152.80  Aligned_cols=126  Identities=40%  Similarity=1.064  Sum_probs=111.8

Q ss_pred             cccccCCCCCCCCCCC-CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCC----CCCCCCCeecCCCCeee
Q psy11501          7 EVCGPGRFGQNCSQEC-QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINR----CRCQNGAICNPANGQCL   81 (133)
Q Consensus         7 ~~C~~g~~g~~c~~~C-~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~----~~C~~~~~C~~~~~~C~   81 (133)
                      ..|++||+|+.|+..| +|.++++|++.+++|.|++||+|..|+..|.++|+|..|...    ..|.+++.|....++|.
T Consensus       187 c~C~~g~~G~~C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~  266 (423)
T 2gy5_A          187 RRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCS  266 (423)
T ss_dssp             CSSCTTEESTTSCEECCCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEE
T ss_pred             CcCCCCCCCCCCCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEE
Confidence            4799999999999888 699999999878999999999999999779999999887643    24777788877789999


Q ss_pred             CCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccCC
Q psy11501         82 CAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        82 C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      |++||.|.+|+..|.+||+|..|+.+|+|.++++|++..+ |.|++||+|.+
T Consensus       267 C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~-C~C~~G~~G~~  317 (423)
T 2gy5_A          267 CATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-CLCSPGWQGLQ  317 (423)
T ss_dssp             CCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE-EECCTTCBSTT
T ss_pred             eCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCc-eECCCCCcCCC
Confidence            9999999999977999999999988889999999987665 99999999963

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=99.75  E-value=4.7e-19  Score=114.77  Aligned_cols=110  Identities=35%  Similarity=0.858  Sum_probs=89.4

Q ss_pred             CCCCCCCEEecCC----Cee-ecCCCCccCCCCccCCCCCCCCCCCC--------CCCCCCC------CeecCCCCeee-
Q psy11501         22 CQCRNGAECHPAT----GEC-SCQPGFTGSLCEERCPPGTHGPSCIN--------RCRCQNG------AICNPANGQCL-   81 (133)
Q Consensus        22 C~C~~~g~C~~~~----~~C-~C~~g~~G~~C~~~C~~g~~g~~C~~--------~~~C~~~------~~C~~~~~~C~-   81 (133)
                      |+|.++++|+..+    ++| .|+++|+|.+|+ +|+++|+|..+..        .+.|.+.      +.|+..+++|. 
T Consensus         1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce-~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~   79 (162)
T 1klo_A            1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE-LCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK   79 (162)
T ss_dssp             CCSCTTCCEEECSSSCCEEECSCCTTEESTTSC-EECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCC
T ss_pred             CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCc-CCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccC
Confidence            5788999998643    589 799999999998 7999999865542        2456554      47877789995 


Q ss_pred             CCCCcccCCCCCCCCCCccCCCCC-------CCCCCCCCC------eeccCCCceeCCCCCccCC
Q psy11501         82 CAPGWMGSVCNVPCTPGMWGQGCT-------VPCECFNGA------SCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        82 C~~g~~g~~c~~~c~~g~~g~~c~-------~~c~C~~~g------~C~~~~g~C~C~~g~~G~~  133 (133)
                      |.++|+|.+|+ +|++||+|..+.       .+|.|.+.+      +|+..+++|+|+++|+|.+
T Consensus        80 C~~g~~G~~Ce-~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~  143 (162)
T 1klo_A           80 CIYNTAGFYCD-RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRD  143 (162)
T ss_dssp             BCTTEETTTTC-EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTT
T ss_pred             CCCCCcCCCcC-cCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCC
Confidence            99999999999 699999998876       356787654      8988889999999999864

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=99.68  E-value=9.8e-18  Score=108.54  Aligned_cols=101  Identities=37%  Similarity=0.914  Sum_probs=81.6

Q ss_pred             CCCccccccccCCCCCCCC--------CCCCCCCC------CEEecCCCeee-cCCCCccCCCCccCCCCCCCCCCC---
Q psy11501          1 MGTHCEEVCGPGRFGQNCS--------QECQCRNG------AECHPATGECS-CQPGFTGSLCEERCPPGTHGPSCI---   62 (133)
Q Consensus         1 ~g~~c~~~C~~g~~g~~c~--------~~C~C~~~------g~C~~~~~~C~-C~~g~~G~~C~~~C~~g~~g~~C~---   62 (133)
                      +|..|+ +|.+||+|..+.        .+|.|.++      +.|+..+++|+ |.++|+|.+|+ +|+++|||..+.   
T Consensus        28 ~G~~Ce-~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce-~C~~Gy~g~~~~~~~  105 (162)
T 1klo_A           28 AGKRCE-LCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCD-RCKEGFFGNPLAPNP  105 (162)
T ss_dssp             ESTTSC-EECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTC-EECTTEEECTTCSSG
T ss_pred             cCCCCc-CCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcC-cCchhhcCCccccCC
Confidence            367777 788888886554        24677765      57887799995 99999999998 799999998876   


Q ss_pred             ----CCCCCCCCC------eecCCCCeeeCCCCcccCCCCCCCCCCccCCCC
Q psy11501         63 ----NRCRCQNGA------ICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGC  104 (133)
Q Consensus        63 ----~~~~C~~~~------~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c  104 (133)
                          ..+.|.+.+      .|+..+++|.|+++|+|.+|+ +|.++|++...
T Consensus       106 ~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd-~C~~g~~g~~~  156 (162)
T 1klo_A          106 ADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG-TCDPGYYNLQS  156 (162)
T ss_dssp             GGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC-EECTTCBCGGG
T ss_pred             CCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC-CCCCCcccCCC
Confidence                335676654      788779999999999999999 69999997654

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.63  E-value=4.5e-16  Score=110.74  Aligned_cols=113  Identities=37%  Similarity=1.005  Sum_probs=53.3

Q ss_pred             ccccCCCCCCCCC-CC--CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCC
Q psy11501          8 VCGPGRFGQNCSQ-EC--QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAP   84 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~   84 (133)
                      .|++||+|..|+. .|  +|.++++|.. .+.|.|++||+|..|+..        .|.  .+|.++++|.. .++|.|++
T Consensus       168 ~C~~G~~G~~C~~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~--------~C~--~~C~~~G~C~~-~~~C~C~~  235 (324)
T 2ygq_A          168 ECPDGFHGPHCEKALCTPRCMNGGLCVT-PGFCICPPGFYGVNCDKA--------NCS--TTCFNGGTCFY-PGKCICPP  235 (324)
T ss_dssp             ECCTTEESSSSCEESSSSCCCTTCEECS-SCCEECCTTCBTTTTCBC--------CCS--SCCCSSCCBSC-SSCBCCCT
T ss_pred             ECCCCCcCCCCCCCCCCCCCCCCCEEcC-CCEEeCCCCccCCCcccC--------cCC--CCCCCCCeeCC-CCeeeCCC
Confidence            6888899888875 45  5888888864 678999999998888631        132  25667777754 46788888


Q ss_pred             CcccCCCCC-------------------CCCCCccCCCCCC-CC--CCCCCCeeccCCCceeCCCCCccCC
Q psy11501         85 GWMGSVCNV-------------------PCTPGMWGQGCTV-PC--ECFNGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        85 g~~g~~c~~-------------------~c~~g~~g~~c~~-~c--~C~~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      ||.|..|+.                   .|.+||+|..|+. .|  .|.++|+|++ .++|.|++||+|.+
T Consensus       236 G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~-~~~C~C~~G~~G~~  305 (324)
T 2ygq_A          236 GLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE-PNKCQCQEGWHGRH  305 (324)
T ss_dssp             TCCTTTTC---------------------------------------------------------------
T ss_pred             CccCCCCCcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC-CCEeECCCCCcCCC
Confidence            888877753                   3667777777753 23  5778899976 57899999999863

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.61  E-value=5.2e-16  Score=101.10  Aligned_cols=114  Identities=28%  Similarity=0.767  Sum_probs=79.8

Q ss_pred             ccccCCCCCCCCCCCC----CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCC-CCCeecCCCCeeeC
Q psy11501          8 VCGPGRFGQNCSQECQ----CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQ-NGAICNPANGQCLC   82 (133)
Q Consensus         8 ~C~~g~~g~~c~~~C~----C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~-~~~~C~~~~~~C~C   82 (133)
                      .|++||+|+.|+..|.    +.++++|+. +++|.|.+||+|..|+..        .|...  |. ..+.|.+ .++|.|
T Consensus        20 ~C~~g~~G~~C~~~C~~~~~c~~~g~C~~-~g~C~C~~G~~G~~C~~~--------~C~~~--C~~~~g~C~~-~~~C~C   87 (169)
T 2vj2_A           20 TCDDYYYGFGCNKFCRPRDDFFGHYACDQ-NGNKTCMEGWMGPECNRA--------ICRQG--CSPKHGSCKL-PGDCRC   87 (169)
T ss_dssp             -CCTTEETTTTCEECCCEEETTEEEEECS-SCCEEECTTEESTTSCEE--------CCCTT--CCTTTEECSS-TTCCEE
T ss_pred             eCCCcCcCCCcccccCCCCCcCCCCEeCC-CCeeECCCCCcCCCCCCC--------CCCCC--CCCCCcccCC-CCeeEC
Confidence            7999999999987773    666788864 789999999999998731        13222  32 2345543 567777


Q ss_pred             CCCcccCCCCC------------------CCCCCccCCCCC-C------CCCCCCCCeeccC---CCceeCCCCCccCC
Q psy11501         83 APGWMGSVCNV------------------PCTPGMWGQGCT-V------PCECFNGASCHHV---TGECQCEPGFKGQK  133 (133)
Q Consensus        83 ~~g~~g~~c~~------------------~c~~g~~g~~c~-~------~c~C~~~g~C~~~---~g~C~C~~g~~G~~  133 (133)
                      ++||.|..|+.                  .|.+||+|..|+ +      ..+|.++++|++.   .++|+|++||+|.+
T Consensus        88 ~~G~~G~~C~~C~~~~~C~~g~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~  166 (169)
T 2vj2_A           88 QYGWQGLYCDKCIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPN  166 (169)
T ss_dssp             CTTEESSSSCEECCCTTCSSEECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred             CCCCCCCCcccCCCCCCCCCCCcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence            77777766542                  345677777665 2      1368899999874   25999999999974

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.59  E-value=3.6e-15  Score=109.40  Aligned_cols=69  Identities=43%  Similarity=1.132  Sum_probs=61.7

Q ss_pred             CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501         24 CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        24 C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~~   93 (133)
                      |.+++.|...+++|.|++||+|..|+..|.++|+|..|...++|.+++.|+... .|.|++||.|.+|+.
T Consensus       252 C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~-~C~C~~G~~G~~Ce~  320 (423)
T 2gy5_A          252 CKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ-GCLCSPGWQGLQCER  320 (423)
T ss_dssp             TTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT-EEECCTTCBSTTSCB
T ss_pred             CCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC-ceECCCCCcCCCCcc
Confidence            666788887789999999999999996799999999999888899999998654 499999999999985

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.47  E-value=1.9e-13  Score=85.85  Aligned_cols=97  Identities=33%  Similarity=0.876  Sum_probs=73.2

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPG   98 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g   98 (133)
                      +|.++++|.+.  .++|.|++||+|..|+....+      |... +|.++++|.+.  .++|.|++||.|..|+...   
T Consensus        14 ~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~------C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~---   83 (135)
T 2vj3_A           14 PCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNE------CVSN-PCQNDATCLDQIGEFQCICMPGYEGVHCEVNT---   83 (135)
T ss_dssp             SSSTTCEEEECSSSEEEECCTTEESTTSCEECCT------TTTC-CCCSSCEEEECSSCEEEECCTTEESSSSCEEC---
T ss_pred             CCCCCCEeECCCCCEEEECCCCCcCCcccccCcc------CCCC-CCCCCCEEeCCCCCceeeCCCCCcCCcceecC---
Confidence            58888999865  569999999999999744333      5443 78888899765  5799999999999886311   


Q ss_pred             ccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccCC
Q psy11501         99 MWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQK  133 (133)
Q Consensus        99 ~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~~  133 (133)
                         ..|.. -+|.++++|++..+  +|.|++||+|.+
T Consensus        84 ---~~C~~-~~C~~~g~C~~~~g~~~C~C~~G~~G~~  116 (135)
T 2vj3_A           84 ---DECAS-SPCLHNGRCLDKINEFQCECPTGFTGHL  116 (135)
T ss_dssp             ---CTTTT-CCSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred             ---CcccC-CCcCCCCEeECCCCCeEEECCCCCcCCc
Confidence               12221 26888999988654  899999999863

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.43  E-value=7.3e-13  Score=83.73  Aligned_cols=103  Identities=29%  Similarity=0.750  Sum_probs=72.1

Q ss_pred             CCCCCCEEecC----CCeeecCCCCccCCCCccCCCCCC------CCCCCCCCCCCCCCeec-------CC--CCeeeCC
Q psy11501         23 QCRNGAECHPA----TGECSCQPGFTGSLCEERCPPGTH------GPSCINRCRCQNGAICN-------PA--NGQCLCA   83 (133)
Q Consensus        23 ~C~~~g~C~~~----~~~C~C~~g~~G~~C~~~C~~g~~------g~~C~~~~~C~~~~~C~-------~~--~~~C~C~   83 (133)
                      +|.++++|.+.    .+.|.|++||+|..|+........      -..|... +|.++++|.       +.  .++|.|+
T Consensus         7 pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~-~C~~~g~C~~~~~~~~~~~~~~~C~C~   85 (143)
T 4d90_A            7 PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPN-PCHNGGTCEISEAYRGDTFIGYVCKCP   85 (143)
T ss_dssp             CCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSC-CCCTTCEEEECCCEETTEECCEEEECC
T ss_pred             cCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCC-CCCCCCEecCCCccccCCCCCeEeECc
Confidence            57888999853    479999999999999742211111      1224332 688888997       32  6799999


Q ss_pred             CCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccCC
Q psy11501         84 PGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQK  133 (133)
Q Consensus        84 ~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~~  133 (133)
                      +||.|..|+...      ..|. .-+|.++++|++..+  +|.|++||+|++
T Consensus        86 ~G~~G~~C~~~i------~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G~~  130 (143)
T 4d90_A           86 RGFNGIHCQHNI------NECE-VEPCKNGGICTDLVANYSCECPGEFMGRN  130 (143)
T ss_dssp             TTEESTTSCEEC------CTTT-TCCSCTTCEEEEETTEEEEECCTTCBSTT
T ss_pred             CCCcCCCcccCC------CcCC-CCCCCCCCEeECCCCCeEeECCCCCccCC
Confidence            999999886210      1222 126888999988655  899999999974

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.40  E-value=7.9e-13  Score=94.04  Aligned_cols=97  Identities=40%  Similarity=1.108  Sum_probs=57.9

Q ss_pred             CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCCC---------
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNV---------   93 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~~---------   93 (133)
                      +|.++|+|.+ .+.|.|++||+|..|+..        .|..  +|.++++|.. .++|.|++||.|..|+.         
T Consensus       154 ~C~~~G~C~~-~~~C~C~~G~~G~~C~~~--------~C~~--~C~~~G~C~~-~~~C~C~~G~~G~~C~~~~C~~~C~~  221 (324)
T 2ygq_A          154 GCRNGGFCNE-RRICECPDGFHGPHCEKA--------LCTP--RCMNGGLCVT-PGFCICPPGFYGVNCDKANCSTTCFN  221 (324)
T ss_dssp             CCCSSCEECT-TSCEECCTTEESSSSCEE--------SSSS--CCCTTCEECS-SCCEECCTTCBTTTTCBCCCSSCCCS
T ss_pred             CCCCCCEECC-CCeEECCCCCcCCCCCCC--------CCCC--CCCCCCEEcC-CCEEeCCCCccCCCcccCcCCCCCCC
Confidence            5889999975 689999999999999842        1432  5788899964 68999999999998863         


Q ss_pred             ----------CCCCCccCCCCCC-CC--CCCCCCeeccCCCceeCCCCCccC
Q psy11501         94 ----------PCTPGMWGQGCTV-PC--ECFNGASCHHVTGECQCEPGFKGQ  132 (133)
Q Consensus        94 ----------~c~~g~~g~~c~~-~c--~C~~~g~C~~~~g~C~C~~g~~G~  132 (133)
                                .|.+||+|..|+. .|  +|.++|+|+. .++|.|++||+|.
T Consensus       222 ~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~-~~~C~C~~G~~G~  272 (324)
T 2ygq_A          222 GGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG-KSKCKCSKGYQGD  272 (324)
T ss_dssp             SCCBSCSSCBCCCTTCCTTTTC------------------------------
T ss_pred             CCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC-CCEEECCCCCcCC
Confidence                      3788999998864 23  5778889974 5689999999985

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=99.36  E-value=3.3e-13  Score=101.51  Aligned_cols=98  Identities=31%  Similarity=0.831  Sum_probs=46.9

Q ss_pred             CCeeecCCCCccCCCCccCCCCCCCCCCCCC-----CCCCCC------CeecCCCCeeeCCCCcccCCCCCCCCCCccCC
Q psy11501         34 TGECSCQPGFTGSLCEERCPPGTHGPSCINR-----CRCQNG------AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQ  102 (133)
Q Consensus        34 ~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~-----~~C~~~------~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~  102 (133)
                      .+.|.|.++|.|..|+ .|.+||+|..+...     ++|.+.      +.|+..+++|.|+++|.|.+|+ +|.+||++.
T Consensus       406 ~~~C~C~~g~~G~~C~-~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g~  483 (525)
T 4aqs_A          406 AGQCRCKLHVEGERCD-VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWGL  483 (525)
T ss_dssp             SSCCCBCTTEETTTTC-EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C--------
T ss_pred             CCccCCCCCCCCCccc-CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccCC
Confidence            4689999999999998 89999999876542     234443      4455557899999999999999 799999975


Q ss_pred             CCC----CCCCCCCCCe----eccCCCceeCCCCCccCC
Q psy11501        103 GCT----VPCECFNGAS----CHHVTGECQCEPGFKGQK  133 (133)
Q Consensus       103 ~c~----~~c~C~~~g~----C~~~~g~C~C~~g~~G~~  133 (133)
                      ...    .+|+|.+++.    |+..+++|.|++||+|.+
T Consensus       484 ~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~  522 (525)
T 4aqs_A          484 SNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ  522 (525)
T ss_dssp             ---------------------------------------
T ss_pred             CCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCC
Confidence            322    2457777664    545577999999999964

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.33  E-value=3.2e-12  Score=98.50  Aligned_cols=110  Identities=37%  Similarity=0.927  Sum_probs=73.5

Q ss_pred             cccccCCCCCCCCC-----------CCC-------CCCCCEEecCCCeeecC----CCCccCCCCccCCCCCCCCCCCCC
Q psy11501          7 EVCGPGRFGQNCSQ-----------ECQ-------CRNGAECHPATGECSCQ----PGFTGSLCEERCPPGTHGPSCINR   64 (133)
Q Consensus         7 ~~C~~g~~g~~c~~-----------~C~-------C~~~g~C~~~~~~C~C~----~g~~G~~C~~~C~~g~~g~~C~~~   64 (133)
                      +.|++||+|..|+.           .|.       |.++|+|.  .++|.|.    +||+|..|+..-.      .|...
T Consensus       460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~Gy~G~~Ce~~~~------~C~~~  531 (690)
T 3fcs_B          460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFGKITGKYCECDDF------SCVRY  531 (690)
T ss_dssp             EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSCCCBSTTSCBCSS------CCCBS
T ss_pred             eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCCCeeCCCcCcccC------cCcCC
Confidence            37999999999863           252       77889997  5899999    9999999973211      14321


Q ss_pred             --CCCCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCC--CCCCCCCCeeccCCCceeC-CCCCccC
Q psy11501         65 --CRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTV--PCECFNGASCHHVTGECQC-EPGFKGQ  132 (133)
Q Consensus        65 --~~C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~--~c~C~~~g~C~~~~g~C~C-~~g~~G~  132 (133)
                        .+|.+++.|..  ++|.|.+||.|..|+  |+..  -..|..  ...|.++|+|..  ++|.| ++||+|.
T Consensus       532 ~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce--C~~~--~~~C~~~~g~~C~~~G~C~~--g~C~C~~~Gy~G~  596 (690)
T 3fcs_B          532 KGEMCSGHGQCSC--GDCLCDSDWTGYYCN--CTTR--TDTCMSSNGLLCSGRGKCEC--GSCVCIQPGSYGD  596 (690)
T ss_dssp             SSSBGGGSEEEET--TEEEECTTEESSSSC--EECC--CTTTBCTTSSBTSSSCEEET--TEEECCSTTCBST
T ss_pred             CCCCCCCCCEecC--CeeECcCCCcCCCCc--cCCC--CCcccCCCCCCCCCCCEEeC--CEEECCCCCccCC
Confidence              25777788874  899999999999887  1100  011211  024666677743  56777 6777664

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.28  E-value=3.9e-12  Score=97.85  Aligned_cols=110  Identities=30%  Similarity=0.802  Sum_probs=78.8

Q ss_pred             ccccCCCCCCCCC------------CCC-------CCCCCEEecCCCeeecC------CCCccCCCCccCCCCCCCCCCC
Q psy11501          8 VCGPGRFGQNCSQ------------ECQ-------CRNGAECHPATGECSCQ------PGFTGSLCEERCPPGTHGPSCI   62 (133)
Q Consensus         8 ~C~~g~~g~~c~~------------~C~-------C~~~g~C~~~~~~C~C~------~g~~G~~C~~~C~~g~~g~~C~   62 (133)
                      .|.+||+|..|+.            .|.       |+++|.|.  .++|.|.      +||.|..|+..-.      .|.
T Consensus       449 ~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C~C~~~~~~~~G~~G~~Ce~~~~------~C~  520 (687)
T 3k6s_B          449 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI------NCE  520 (687)
T ss_dssp             EECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEEEECCCCSTTCCEESTTSCEESS------CSC
T ss_pred             EcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEEEcCCCCCCCCCccccccccccc------ccc
Confidence            6999999999971            362       78889998  5799999      9999999973211      133


Q ss_pred             C--CCCCCC--CCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCC--CCCCCCCCeeccCCCceeCCCCCccCC
Q psy11501         63 N--RCRCQN--GAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTV--PCECFNGASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        63 ~--~~~C~~--~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~--~c~C~~~g~C~~~~g~C~C~~g~~G~~  133 (133)
                      .  ..+|.+  +|.|.  .++|.|.+||.|..|+.  +...  ..|..  ...|.++|+|+.  ++|.|++||+|.+
T Consensus       521 ~~~~~~C~~~~~G~C~--~g~C~C~~G~~G~~Cec--~~~~--~~C~~~~g~~Cs~~G~C~~--g~C~C~~Gy~G~~  589 (687)
T 3k6s_B          521 RYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQC--ERTT--EGCLNPRRVECSGRGRCRC--NVCECHSGYQLPL  589 (687)
T ss_dssp             EETTEETSHHHHEEEE--TTEEEECTTCCSTTSCS--CCSS--CTTBCTTCSBTSSSCCBCS--SCBCCSTTCCTTT
T ss_pred             CCCCcCcCCCCCCeEE--CCEEEcCCCCcCCCCcc--CCCC--CCCCCCCCCCCCCCCcCCC--CEEECCCCCcCCC
Confidence            1  124776  78887  47999999999999972  2110  12221  125788899965  7899999999863

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.20  E-value=3e-11  Score=75.70  Aligned_cols=79  Identities=34%  Similarity=0.837  Sum_probs=63.1

Q ss_pred             ccccCCCCCCCCC---CC---CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--C
Q psy11501          8 VCGPGRFGQNCSQ---EC---QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--N   77 (133)
Q Consensus         8 ~C~~g~~g~~c~~---~C---~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~   77 (133)
                      .|++||+|..|+.   +|   +|.++++|.+.  .++|.|++||+|..|+....+      |... +|.++++|.+.  .
T Consensus        31 ~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~------C~~~-~C~~~g~C~~~~g~  103 (135)
T 2vj3_A           31 QCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDE------CASS-PCLHNGRCLDKINE  103 (135)
T ss_dssp             ECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCT------TTTC-CSTTTCEEEECSSC
T ss_pred             ECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCc------ccCC-CcCCCCEeECCCCC
Confidence            6999999999963   45   58888999864  569999999999999744333      5443 78888999765  6


Q ss_pred             CeeeCCCCcccCCCCC
Q psy11501         78 GQCLCAPGWMGSVCNV   93 (133)
Q Consensus        78 ~~C~C~~g~~g~~c~~   93 (133)
                      ++|.|++||.|..|+.
T Consensus       104 ~~C~C~~G~~G~~C~~  119 (135)
T 2vj3_A          104 FQCECPTGFTGHLCQV  119 (135)
T ss_dssp             EEEECCTTEESSSSCE
T ss_pred             eEEECCCCCcCCccCc
Confidence            7999999999998863

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.19  E-value=3.5e-11  Score=75.91  Aligned_cols=79  Identities=35%  Similarity=0.831  Sum_probs=62.3

Q ss_pred             ccccCCCCCCCCC---------------CC---CCCCCCEEec---------CCCeeecCCCCccCCCCccCCCCCCCCC
Q psy11501          8 VCGPGRFGQNCSQ---------------EC---QCRNGAECHP---------ATGECSCQPGFTGSLCEERCPPGTHGPS   60 (133)
Q Consensus         8 ~C~~g~~g~~c~~---------------~C---~C~~~g~C~~---------~~~~C~C~~g~~G~~C~~~C~~g~~g~~   60 (133)
                      .|++||+|..|+.               +|   +|.++++|..         ..+.|.|++||+|..|+....+      
T Consensus        26 ~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~------   99 (143)
T 4d90_A           26 ECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINE------   99 (143)
T ss_dssp             ECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCT------
T ss_pred             ECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCc------
Confidence            6999999998864               24   4888899972         2578999999999999744333      


Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      |... +|.++++|.+.  .++|.|++||.|.+++.
T Consensus       100 C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A          100 CEVE-PCKNGGICTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             TTTC-CSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred             CCCC-CCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence            5533 78888999755  56899999999999875

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.14  E-value=7e-11  Score=74.64  Aligned_cols=101  Identities=24%  Similarity=0.655  Sum_probs=69.1

Q ss_pred             CCCCCCEEecCCCeeecCCCCccC---------CCCccCCCCCCCCCCCCC--CCCCCCCeecCC--CCeeeCCCCcccC
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGS---------LCEERCPPGTHGPSCINR--CRCQNGAICNPA--NGQCLCAPGWMGS   89 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~---------~C~~~C~~g~~g~~C~~~--~~C~~~~~C~~~--~~~C~C~~g~~g~   89 (133)
                      +|.++++|++ +++|.|++||+|.         .|+ ...      .|...  .+|.+++.|.+.  .++|.|++||.|.
T Consensus         8 ~C~~~~~C~~-~~~C~C~~G~~g~~~~~~~~~~~C~-did------eC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~   79 (143)
T 2bou_A            8 WCPQDSSCVN-ATACRCNPGFSSFSEIITTPMETCD-DIN------ECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPV   79 (143)
T ss_dssp             TCCTTEEESS-SSCEEECTTEECSSSSBCSTTCCCE-ECC------GGGC----CCCTTEEEEECSSCEEEEECTTEEET
T ss_pred             cCCCCCEEcC-CCEEeCCCCCcCccccccCCCCcCC-ccc------cccCCCCCCCCCCCEEEcCCCCeEeECCCCcccC
Confidence            4778899986 5899999999984         443 111      24432  257777888765  6799999999998


Q ss_pred             CCCCCCCCCccCCCCCCC-------CCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         90 VCNVPCTPGMWGQGCTVP-------CECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        90 ~c~~~c~~g~~g~~c~~~-------c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .++..+. ...+..|++.       -+|.++++|+++.+  +|.|++||+|.
T Consensus        80 ~~~~~~~-~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~  130 (143)
T 2bou_A           80 SGAKTFK-NESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPR  130 (143)
T ss_dssp             TCCSCBS-SGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBC
T ss_pred             cCccccc-cCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccC
Confidence            6653221 1122233321       25778899998765  89999999986

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.14  E-value=3e-11  Score=78.48  Aligned_cols=41  Identities=34%  Similarity=1.015  Sum_probs=32.9

Q ss_pred             ccccCCCCCCCCC-CC--CCC-CCCEEecCCCeeecCCCCccCCCC
Q psy11501          8 VCGPGRFGQNCSQ-EC--QCR-NGAECHPATGECSCQPGFTGSLCE   49 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C--~C~-~~g~C~~~~~~C~C~~g~~G~~C~   49 (133)
                      +|++||+|..|+. .|  .|. .++.|.+ +++|.|++||+|..|+
T Consensus        53 ~C~~G~~G~~C~~~~C~~~C~~~~g~C~~-~~~C~C~~G~~G~~C~   97 (169)
T 2vj2_A           53 TCMEGWMGPECNRAICRQGCSPKHGSCKL-PGDCRCQYGWQGLYCD   97 (169)
T ss_dssp             EECTTEESTTSCEECCCTTCCTTTEECSS-TTCCEECTTEESSSSC
T ss_pred             ECCCCCcCCCCCCCCCCCCCCCCCcccCC-CCeeECCCCCCCCCcc
Confidence            6999999999875 35  354 5577865 7899999999999887

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.12  E-value=1.6e-12  Score=85.63  Aligned_cols=111  Identities=27%  Similarity=0.685  Sum_probs=77.6

Q ss_pred             ccccCCCCC---CCCC--CCC-------CCCCCEEecC-------CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCC
Q psy11501          8 VCGPGRFGQ---NCSQ--ECQ-------CRNGAECHPA-------TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQ   68 (133)
Q Consensus         8 ~C~~g~~g~---~c~~--~C~-------C~~~g~C~~~-------~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~   68 (133)
                      .|++||+|.   .|++  +|.       |.++++|.+.       .++|.|++||+|..++  |..    ..|... +|.
T Consensus        28 ~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~--C~~----d~C~~~-~C~  100 (186)
T 1z1y_A           28 MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT--CVL----DVCQYX-NCG  100 (186)
T ss_dssp             EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE--EEE----GGGTTC-CCC
T ss_pred             ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC--CCC----CcCcCC-CCC
Confidence            699999987   5643  453       6677888753       4689999999998653  211    125443 688


Q ss_pred             CCCeec----CC--CCeeeCCCCccc-----CCCCCCCCCCccCCCCCCCCCC-CCCCeeccCCC--ceeCCCCCccC
Q psy11501         69 NGAICN----PA--NGQCLCAPGWMG-----SVCNVPCTPGMWGQGCTVPCEC-FNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        69 ~~~~C~----~~--~~~C~C~~g~~g-----~~c~~~c~~g~~g~~c~~~c~C-~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      +++.|.    +.  .++|.|++||.|     ..|+..     ....|..  +| .++++|++..+  +|.|++||+|.
T Consensus       101 ~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~-----~~~~C~~--~C~~~~~~C~n~~g~y~C~C~~G~~g~  171 (186)
T 1z1y_A          101 ESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT-----GETACQL--XCNTDNEVCXNVEGVYXCQCMEGFTFD  171 (186)
T ss_dssp             TTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-----ECCCCCC--CCCTTTEEEEEETTEEEEEECTTCEEE
T ss_pred             CCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-----CCCcccc--cccccCcceecCCCCeeeECCCCCccC
Confidence            888997    54  579999999998     445421     0012322  67 78899988665  89999999985

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.12  E-value=2.4e-10  Score=88.19  Aligned_cols=102  Identities=30%  Similarity=0.840  Sum_probs=71.8

Q ss_pred             ccc----cCCCCCCCC---CCCC------CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCC--CCCCCCCCe
Q psy11501          8 VCG----PGRFGQNCS---QECQ------CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQNGAI   72 (133)
Q Consensus         8 ~C~----~g~~g~~c~---~~C~------C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~--~~~C~~~~~   72 (133)
                      .|+    +||+|..|+   ..|.      |.++|.|..  ++|.|.+||+|..|+  |+...  ..|..  ..+|.+++.
T Consensus       507 ~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce--C~~~~--~~C~~~~g~~C~~~G~  580 (690)
T 3fcs_B          507 VCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--GDCLCDSDWTGYYCN--CTTRT--DTCMSSNGLLCSGRGK  580 (690)
T ss_dssp             EECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--TEEEECTTEESSSSC--EECCC--TTTBCTTSSBTSSSCE
T ss_pred             EeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--CeeECcCCCcCCCCc--cCCCC--CcccCCCCCCCCCCCE
Confidence            578    999999996   2463      777899974  899999999999997  21100  12432  136888899


Q ss_pred             ecCCCCeeeC-CCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccC
Q psy11501         73 CNPANGQCLC-APGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQ  132 (133)
Q Consensus        73 C~~~~~~C~C-~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~  132 (133)
                      |.  .++|.| .+||.|..|+. |+      .|.  -+|.++++|.+      |..+|+|.
T Consensus       581 C~--~g~C~C~~~Gy~G~~Ce~-C~------~C~--~~C~~~g~Cv~------C~~g~tG~  624 (690)
T 3fcs_B          581 CE--CGSCVCIQPGSYGDTCEK-CP------TCP--DACTFKKECVE------CKKFDRGA  624 (690)
T ss_dssp             EE--TTEEECCSTTCBSTTSCB-CT------TSC--CTTTSCCGGGT------TTTTCCSS
T ss_pred             Ee--CCEEECCCCCccCCCcCc-CC------CCC--CCCCCCCCccc------CCCCCccC
Confidence            97  479999 99999999984 32      121  15666777754      66666664

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=99.04  E-value=9.4e-11  Score=88.22  Aligned_cols=89  Identities=34%  Similarity=0.821  Sum_probs=36.9

Q ss_pred             CCccccccccCCCCCCCCC-----CCCCCCCC------EEecCCCeeecCCCCccCCCCccCCCCCCCCCCC----CCCC
Q psy11501          2 GTHCEEVCGPGRFGQNCSQ-----ECQCRNGA------ECHPATGECSCQPGFTGSLCEERCPPGTHGPSCI----NRCR   66 (133)
Q Consensus         2 g~~c~~~C~~g~~g~~c~~-----~C~C~~~g------~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~----~~~~   66 (133)
                      |..|+ +|.+||+|..+..     +|+|.+.+      .|+..+++|.|++||+|..|+ .|.+||++....    ..++
T Consensus       417 G~~C~-~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g~~~~~~~C~~C~  494 (525)
T 4aqs_A          417 GERCD-VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWGLSNDLDGCRPCD  494 (525)
T ss_dssp             TTTTC-EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C-------------------
T ss_pred             CCccc-CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccCCCCCCCCCcCCC
Confidence            56777 8999999987764     24555444      455567899999999999998 899999975322    1235


Q ss_pred             CCCCCee----cCCCCeeeCCCCcccCCCC
Q psy11501         67 CQNGAIC----NPANGQCLCAPGWMGSVCN   92 (133)
Q Consensus        67 C~~~~~C----~~~~~~C~C~~g~~g~~c~   92 (133)
                      |.+++.+    +..+++|.|++||.|.+|+
T Consensus       495 C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          495 CDLGGALNNSCSEDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             ------------------------------
T ss_pred             CCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence            6665544    4447789999999999886

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.95  E-value=1.6e-12  Score=89.48  Aligned_cols=125  Identities=17%  Similarity=0.196  Sum_probs=85.8

Q ss_pred             ccccC---CCCCCCCCCC-----CCCCCCEEecC--CCeeecCCCCccCCCCcc---------CCC--------CCCCCC
Q psy11501          8 VCGPG---RFGQNCSQEC-----QCRNGAECHPA--TGECSCQPGFTGSLCEER---------CPP--------GTHGPS   60 (133)
Q Consensus         8 ~C~~g---~~g~~c~~~C-----~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~---------C~~--------g~~g~~   60 (133)
                      .+.+|   +.|..++..+     +|.++++|++.  +|+|.|++||+|.+|+..         +..        .+.|..
T Consensus        16 ~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~   95 (267)
T 4fbr_A           16 TWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGAR   95 (267)
T ss_dssp             CCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCC
T ss_pred             CcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCc
Confidence            35555   4555555432     58889999865  789999999999999853         211        123445


Q ss_pred             CCCC-----CCCCCCCeecCC--CCeeeCCCCcccCCCCCC--------------CCCC---ccCCCCCCC--C---CCC
Q psy11501         61 CINR-----CRCQNGAICNPA--NGQCLCAPGWMGSVCNVP--------------CTPG---MWGQGCTVP--C---ECF  111 (133)
Q Consensus        61 C~~~-----~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~--------------c~~g---~~g~~c~~~--c---~C~  111 (133)
                      |...     .+|.++++|.+.  +++|.|++||+|.+|+..              |.++   +.|..|...  +   +|.
T Consensus        96 c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~  175 (267)
T 4fbr_A           96 DKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSN  175 (267)
T ss_dssp             SSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECS
T ss_pred             cccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCC
Confidence            5433     268888888765  789999999999998852              2222   225555431  1   688


Q ss_pred             CCCeeccC--CCceeCCCCCccC
Q psy11501        112 NGASCHHV--TGECQCEPGFKGQ  132 (133)
Q Consensus       112 ~~g~C~~~--~g~C~C~~g~~G~  132 (133)
                      ++|+|.+.  +++|+|++||+|.
T Consensus       176 ngg~C~dg~~~y~C~Cp~Gf~G~  198 (267)
T 4fbr_A          176 DGGKTLSGTMTYNGEGPIGFRGT  198 (267)
T ss_dssp             STTSEEEEEEEETTSCCEEEEEE
T ss_pred             CCCEeeCCCCCeEEeCCCCcccc
Confidence            99999764  3489999999985

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.90  E-value=1.1e-09  Score=73.73  Aligned_cols=97  Identities=31%  Similarity=0.754  Sum_probs=66.9

Q ss_pred             CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCC-----CCCCC---CCCCCCCCeecCCCCeeeCCCC------ccc
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHG-----PSCIN---RCRCQNGAICNPANGQCLCAPG------WMG   88 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g-----~~C~~---~~~C~~~~~C~~~~~~C~C~~g------~~g   88 (133)
                      .|+++|+|.  .+.|.|.+||+|.+|+  |+.+.+.     ..|..   ..+|.++|+|.  .++|.|.++      |.|
T Consensus        97 ~Csg~G~C~--~g~C~C~~G~~G~~Ce--c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~g~C~C~~gw~~~~~~~G  170 (217)
T 2p28_B           97 LCHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYG  170 (217)
T ss_dssp             TTTTSEEEE--TTEEEECTTEESTTSC--EECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--TTEEEECCCCSTTCCEES
T ss_pred             ccCCCceEE--CCEEECCCCccCCccc--ccCcccccccCCCcCCCCCCCCCCCCCCEEe--CCceECCCCCCCcccEEC
Confidence            477888997  4899999999999997  4433221     23432   23588888997  578999999      578


Q ss_pred             CCCCCCCCCCccCCCCCCC--CCCCCC--CeeccCCCceeCCCCCccCC
Q psy11501         89 SVCNVPCTPGMWGQGCTVP--CECFNG--ASCHHVTGECQCEPGFKGQK  133 (133)
Q Consensus        89 ~~c~~~c~~g~~g~~c~~~--c~C~~~--g~C~~~~g~C~C~~g~~G~~  133 (133)
                      ..|+..  .    ..|...  ..|.++  |+|+  .++|.|.+||+|..
T Consensus       171 ~~Ce~~--~----~~C~~~~g~~C~~~~~G~C~--~g~C~C~~G~~G~~  211 (217)
T 2p28_B          171 QYCECD--T----INCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSA  211 (217)
T ss_dssp             TTSCEE--S----SCSCEETTEETTCTTTEEEE--TTEEEECTTEESTT
T ss_pred             CCcccC--C----ccCCCCCCCCCCCCCCcEEe--CCeeECCCCCccCC
Confidence            877621  0    112111  146666  9996  47999999999963

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.90  E-value=1.2e-12  Score=90.10  Aligned_cols=108  Identities=11%  Similarity=0.112  Sum_probs=71.0

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccC---------CC--------CCCCCCCCCC-----CCCCCCCeecCC--
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERC---------PP--------GTHGPSCINR-----CRCQNGAICNPA--   76 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C---------~~--------g~~g~~C~~~-----~~C~~~~~C~~~--   76 (133)
                      +|.++++|.+.  +|+|.|+.||+|..|+...         ..        .+.|..|...     .+|.++++|.+.  
T Consensus       106 pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~  185 (267)
T 4fbr_A          106 KSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTM  185 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEE
T ss_pred             CCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCC
Confidence            45666777643  6889999999999998521         11        1224444332     257888888755  


Q ss_pred             CCeeeCCCCcccCCCCCC------------------------CCCCccCCCCCCCCCCCCCCeeccC--CCceeCCCCCc
Q psy11501         77 NGQCLCAPGWMGSVCNVP------------------------CTPGMWGQGCTVPCECFNGASCHHV--TGECQCEPGFK  130 (133)
Q Consensus        77 ~~~C~C~~g~~g~~c~~~------------------------c~~g~~g~~c~~~c~C~~~g~C~~~--~g~C~C~~g~~  130 (133)
                      +++|.|++||.|..|+..                        |..++....+  ..+|.++|+|++.  .+.|.||+||+
T Consensus       186 ~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c--~~~c~ngGtC~dg~~sy~CeCp~GF~  263 (267)
T 4fbr_A          186 TYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVAL--NVASSDGGKTLAGTMIYNGEGPIGFR  263 (267)
T ss_dssp             EETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEE--EEECSSTTSEEEEEEEETTSCCEEEE
T ss_pred             CeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccC--CcCCCCCCEeeCCCcceeecCCCCcc
Confidence            788999999999987651                        1111111111  1157788999774  34899999999


Q ss_pred             cC
Q psy11501        131 GQ  132 (133)
Q Consensus       131 G~  132 (133)
                      |+
T Consensus       264 G~  265 (267)
T 4fbr_A          264 AR  265 (267)
T ss_dssp             EE
T ss_pred             cc
Confidence            85

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.86  E-value=3.7e-09  Score=81.55  Aligned_cols=78  Identities=35%  Similarity=0.951  Sum_probs=59.1

Q ss_pred             ccc------cCCCCCCCC---CCCC------CCC--CCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCC--CCCCC
Q psy11501          8 VCG------PGRFGQNCS---QECQ------CRN--GAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQ   68 (133)
Q Consensus         8 ~C~------~g~~g~~c~---~~C~------C~~--~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~--~~~C~   68 (133)
                      .|+      +||+|..|+   ..|.      |.+  +|.|.  .++|.|.+||+|..|+  |+...  ..|..  ..+|.
T Consensus       496 ~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~--~g~C~C~~G~~G~~Ce--c~~~~--~~C~~~~g~~Cs  569 (687)
T 3k6s_B          496 LCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQ--CERTT--EGCLNPRRVECS  569 (687)
T ss_dssp             EECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEE--TTEEEECTTCCSTTSC--SCCSS--CTTBCTTCSBTS
T ss_pred             EcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEE--CCEEEcCCCCcCCCCc--cCCCC--CCCCCCCCCCCC
Confidence            577      999999997   3574      777  88998  4799999999999997  32210  12332  13578


Q ss_pred             CCCeecCCCCeeeCCCCcccCCCCC
Q psy11501         69 NGAICNPANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        69 ~~~~C~~~~~~C~C~~g~~g~~c~~   93 (133)
                      ++|.|..  ++|.|.+||.|..|+.
T Consensus       570 ~~G~C~~--g~C~C~~Gy~G~~Ce~  592 (687)
T 3k6s_B          570 GRGRCRC--NVCECHSGYQLPLCQE  592 (687)
T ss_dssp             SSCCBCS--SCBCCSTTCCTTTTCC
T ss_pred             CCCcCCC--CEEECCCCCcCCCCCC
Confidence            8888874  7899999999999984

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.75  E-value=8.5e-09  Score=60.24  Aligned_cols=73  Identities=25%  Similarity=0.609  Sum_probs=52.4

Q ss_pred             ccccCCCCCCCCC-CC---CCCCCCEEecCCCeeecCCCCccCCCC-ccCCCCCCCCCCCCCCCCCCCCeecC----CCC
Q psy11501          8 VCGPGRFGQNCSQ-EC---QCRNGAECHPATGECSCQPGFTGSLCE-ERCPPGTHGPSCINRCRCQNGAICNP----ANG   78 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C---~C~~~g~C~~~~~~C~C~~g~~G~~C~-~~C~~g~~g~~C~~~~~C~~~~~C~~----~~~   78 (133)
                      .|.+||.|..|+. +|   +|.+.    ...++|.|++||+  .|+ ....      .|... +|.++++|.+    ..+
T Consensus         5 ~C~~g~~g~~c~~~~c~~~pC~n~----~~~y~C~C~~G~~--~C~~~~~~------~C~~~-pC~ngg~C~~~~~~~~~   71 (91)
T 1tpg_A            5 ICRDEKTQMIYQQHQSWLRPVLRS----NRVEYCWCNSGRA--QCHSVPVK------SCSEP-RCFNGGTCQQALYFSDF   71 (91)
T ss_dssp             CCBCSSSCCBCCSSCEEEEECSSS----SCEEEEECSSSCC--BCCEECEE------ECSSC-CSCTTCEEEEESSSSCE
T ss_pred             ECCCCCcCCeECCCcccCCccccC----CCCcEeECCCCCc--ccccCcCC------cccCC-CCCCCCEeecCCCCCCe
Confidence            7999999998864 33   34332    2367899999997  675 1112      25433 7999999974    367


Q ss_pred             eeeCCCCcccCCCCC
Q psy11501         79 QCLCAPGWMGSVCNV   93 (133)
Q Consensus        79 ~C~C~~g~~g~~c~~   93 (133)
                      +|.|++||.|.+|+.
T Consensus        72 ~C~C~~G~~G~~Ce~   86 (91)
T 1tpg_A           72 VCQCPEGFAGKSCEI   86 (91)
T ss_dssp             EEECCTTCBSSSCCB
T ss_pred             EeECCCCCcCCcCCc
Confidence            899999999999874

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.73  E-value=2e-08  Score=76.78  Aligned_cols=99  Identities=29%  Similarity=0.705  Sum_probs=68.9

Q ss_pred             CCCCCCEEecC---CCee-ecCCCCcc--CCCCccCCCCCCCCCCCCC-CCCCCCC---eecCC--CCeee-CCCCcccC
Q psy11501         23 QCRNGAECHPA---TGEC-SCQPGFTG--SLCEERCPPGTHGPSCINR-CRCQNGA---ICNPA--NGQCL-CAPGWMGS   89 (133)
Q Consensus        23 ~C~~~g~C~~~---~~~C-~C~~g~~G--~~C~~~C~~g~~g~~C~~~-~~C~~~~---~C~~~--~~~C~-C~~g~~g~   89 (133)
                      +|.++++|.+.   +++| .|++||+|  ..|+ ...+      |... ..|.+++   +|.+.  .++|. |++||.|.
T Consensus        10 PC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDE------C~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~   82 (634)
T 1yo8_A           10 PCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDE------CALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN   82 (634)
T ss_dssp             CSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCT------TTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred             CCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-cccc------ccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence            67888899864   3789 99999998  6776 3233      5433 1288877   88765  67998 99999998


Q ss_pred             CCCC-----------CCCCCccCCCCCC-CCCCCCCCeeccCC----C--ceeCCCCCcc
Q psy11501         90 VCNV-----------PCTPGMWGQGCTV-PCECFNGASCHHVT----G--ECQCEPGFKG  131 (133)
Q Consensus        90 ~c~~-----------~c~~g~~g~~c~~-~c~C~~~g~C~~~~----g--~C~C~~g~~G  131 (133)
                      .++.           .|..   -..|.. .-+|.++++|.+..    +  +|.|++||+|
T Consensus        83 ~c~g~g~~~~~~dg~~C~d---ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G  139 (634)
T 1yo8_A           83 QPVGVGLEAAKTEKQVCEP---ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG  139 (634)
T ss_dssp             CCEESSSHHHHSCCCCEEE---CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred             ccccccccccccCCCcccc---cccccCCCcccccCccccccccccccceeeeccCCccc
Confidence            7651           1110   112322 12677889998865    3  8999999998

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.67  E-value=3.2e-09  Score=69.76  Aligned_cols=94  Identities=21%  Similarity=0.480  Sum_probs=64.9

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccC---CCCccCCCCCCCCCCCC---CCCCCCCCeecCC-------CCeeeCCCCcc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGS---LCEERCPPGTHGPSCIN---RCRCQNGAICNPA-------NGQCLCAPGWM   87 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~---~C~~~C~~g~~g~~C~~---~~~C~~~~~C~~~-------~~~C~C~~g~~   87 (133)
                      +|.+ ++|.+.  .++|.|++||+|.   .|+ ...+      |..   ..+|.++++|.+.       .++|.|++||.
T Consensus        12 pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~------C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~   83 (186)
T 1z1y_A           12 ICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNE------CXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYT   83 (186)
T ss_dssp             CCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCC------CSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEE
T ss_pred             CCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCc------ccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCc
Confidence            5665 589864  5799999999987   665 2222      552   2367777888654       46899999999


Q ss_pred             cCCCCCCCCCCccCCCCCCCCCCCCCCeec----cCC--CceeCCCCCcc
Q psy11501         88 GSVCNVPCTPGMWGQGCTVPCECFNGASCH----HVT--GECQCEPGFKG  131 (133)
Q Consensus        88 g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~----~~~--g~C~C~~g~~G  131 (133)
                      |..+.  |.    -..|... +|.++++|+    +..  .+|.|++||+|
T Consensus        84 g~~~~--C~----~d~C~~~-~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g  126 (186)
T 1z1y_A           84 LXEDT--CV----LDVCQYX-NCGESGECIVEYLSEIQSAGCSCAIGXVP  126 (186)
T ss_dssp             EETTE--EE----EGGGTTC-CCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred             cCCCC--CC----CCcCcCC-CCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence            97653  11    0123221 588889998    554  38999999988

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.65  E-value=1.8e-08  Score=58.82  Aligned_cols=78  Identities=27%  Similarity=0.601  Sum_probs=51.2

Q ss_pred             CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCC-CCCCCCccCCCCCCCCCCCC
Q psy11501         34 TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCN-VPCTPGMWGQGCTVPCECFN  112 (133)
Q Consensus        34 ~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~-~~c~~g~~g~~c~~~c~C~~  112 (133)
                      +|.|.|.+||+|..|+.  .+      |... +|.++    ...++|.|++||.  .|+ ..      ...|.. -+|.+
T Consensus         1 sy~C~C~~g~~g~~c~~--~~------c~~~-pC~n~----~~~y~C~C~~G~~--~C~~~~------~~~C~~-~pC~n   58 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQQ--HQ------SWLR-PVLRS----NRVEYCWCNSGRA--QCHSVP------VKSCSE-PRCFN   58 (91)
T ss_dssp             CCCCCCBCSSSCCBCCS--SC------EEEE-ECSSS----SCEEEEECSSSCC--BCCEEC------EEECSS-CCSCT
T ss_pred             CeeeECCCCCcCCeECC--Cc------ccCC-ccccC----CCCcEeECCCCCc--ccccCc------CCcccC-CCCCC
Confidence            47899999999988752  11      2221 34432    1257899999997  564 10      012321 26899


Q ss_pred             CCeeccCC----CceeCCCCCccCC
Q psy11501        113 GASCHHVT----GECQCEPGFKGQK  133 (133)
Q Consensus       113 ~g~C~~~~----g~C~C~~g~~G~~  133 (133)
                      +|+|++..    .+|.|++||+|.+
T Consensus        59 gg~C~~~~~~~~~~C~C~~G~~G~~   83 (91)
T 1tpg_A           59 GGTCQQALYFSDFVCQCPEGFAGKS   83 (91)
T ss_dssp             TCEEEEESSSSCEEEECCTTCBSSS
T ss_pred             CCEeecCCCCCCeEeECCCCCcCCc
Confidence            99998753    3899999999963

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=98.61  E-value=3.9e-08  Score=71.51  Aligned_cols=82  Identities=33%  Similarity=0.848  Sum_probs=62.5

Q ss_pred             CCCCCCCCE-EecC------CCeeecCCCCccCCCCccCCCCCCCC-----------CCCCCCCCCCCC-eec-------
Q psy11501         21 ECQCRNGAE-CHPA------TGECSCQPGFTGSLCEERCPPGTHGP-----------SCINRCRCQNGA-ICN-------   74 (133)
Q Consensus        21 ~C~C~~~g~-C~~~------~~~C~C~~g~~G~~C~~~C~~g~~g~-----------~C~~~~~C~~~~-~C~-------   74 (133)
                      +|.|.+++. |+..      .++|.|..+++|..|+ +|.++|+|.           .|. .|.|..++ .|.       
T Consensus       265 ~C~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE-rC~pGy~g~p~~~at~~~~~~C~-pC~Cnghs~~C~~d~~~~~  342 (403)
T 2y38_A          265 RCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD-RCCPGFNQQPWKPATTDSANECQ-SCNCHGHAYDCYYDPEVDR  342 (403)
T ss_dssp             ECCCTTBCSCEEESCTTSTTCEEECCCTTEESSSCC-EECTTCCSSCCCCCCSSCCCCCC-CCCCTTSCSCEEECHHHHH
T ss_pred             ccccCCCccccCCCCCCCccceEeECcCcCcCCCCC-CCCccccCCcccccccCCCcccc-ccccCCCCcccccCccccc
Confidence            578887765 8632      3579999999999998 899999975           352 34565543 352       


Q ss_pred             -----------CCCCeee-CCCCcccCCCCCCCCCCccCCCCC
Q psy11501         75 -----------PANGQCL-CAPGWMGSVCNVPCTPGMWGQGCT  105 (133)
Q Consensus        75 -----------~~~~~C~-C~~g~~g~~c~~~c~~g~~g~~c~  105 (133)
                                 ...++|. |..++.|.+|+ .|.+||+|....
T Consensus       343 ~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE-rC~~GYyg~p~~  384 (403)
T 2y38_A          343 REASQNQDNVYQGGGVCLDCQHHTTGINCE-RCLPGFFRAPDQ  384 (403)
T ss_dssp             TTCCCCTTSCSCCCEEESSCCSSEESTTSC-EECTTCEECTTS
T ss_pred             ccccccccccCCCCCCCCCCcCcCcCCCCC-cCCCCccCCCCC
Confidence                       2367995 99999999999 799999987643

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=98.60  E-value=9.6e-09  Score=75.02  Aligned_cols=102  Identities=22%  Similarity=0.480  Sum_probs=32.1

Q ss_pred             CCCCCCC-CEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCC---------------CCCCCC-CCeecCCCCeee
Q psy11501         21 ECQCRNG-AECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCIN---------------RCRCQN-GAICNPANGQCL   81 (133)
Q Consensus        21 ~C~C~~~-g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~---------------~~~C~~-~~~C~~~~~~C~   81 (133)
                      .|.|..+ ..|...  .+.|.|..+++|..|+ .|.++|++..+..               .+.|.. +..|+...+.|.
T Consensus       296 ~C~CnGHas~C~~~~g~~~C~C~~~ttG~~CE-~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~  374 (426)
T 3zyj_B          296 RCKCNLHATVCVYDNSKLTCECEHNTTGPDCG-KCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQ  374 (426)
T ss_dssp             EECCSSSCSCEEEETTEEEECCCTTEESSSSC-EECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------
T ss_pred             cCcCCCchhhcCCCCCCceeeCCCCCcCCCcc-ccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCC
Confidence            4678766 478754  4589999999999998 8999987543321               112222 223443333343


Q ss_pred             ----CCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCC
Q psy11501         82 ----CAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGF  129 (133)
Q Consensus        82 ----C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~  129 (133)
                          |..+.   .|  .|++||+|..|+ .+.|.++|+|+..+|+|.-+.|.
T Consensus       375 ngg~C~~~~---~C--~C~~G~~G~~Ce-~c~C~~~g~C~~~~Gqc~~~~~~  420 (426)
T 3zyj_B          375 NGGTCHNNV---RC--LCPAAYTGILCE-KLRCEEAGSCGSDSGQGAPPHGT  420 (426)
T ss_dssp             ----------------------------------------------------
T ss_pred             CCCCcCCCC---CC--cCCCCCcCCCCc-CCCCCCCCcccCCCCccCCCCCc
Confidence                33322   44  466777776664 45888999999989998877664

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.58  E-value=1.8e-08  Score=74.86  Aligned_cols=73  Identities=36%  Similarity=0.996  Sum_probs=34.8

Q ss_pred             ccccCCCCCCCCC-CC--CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCC
Q psy11501          8 VCGPGRFGQNCSQ-EC--QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAP   84 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~   84 (133)
                      .|..+|+|..|+. .|  +|.+ ++|.. .++|.|.+||+|..|+..        .|..  +|.++++|.. .++|.|++
T Consensus       380 ~C~~~~~g~~c~~~~C~~~C~n-G~C~~-~~~C~C~~G~~G~~C~~~--------~C~~--~C~~~g~C~~-~~~C~C~~  446 (463)
T 2wg3_C          380 ECRATVQPAQTLTSECSRLCRN-GYCTP-TGKCCCSPGWEGDFCRTA--------KCEP--ACRHGGVCVR-PNKCLCKK  446 (463)
T ss_dssp             GGCCCCCCCCCCCCHHHHHCCS-EEECT-TSCEEECTTEESTTSCEE--------CC-----------------------
T ss_pred             cCCCCCcCCCCccccccCCCCC-CccCC-CCeECCCCCcCCCcCCcC--------cCCC--CCCCCCEECC-CCEEECCC
Confidence            7899999998875 35  5776 89975 569999999999999731        2543  6888889974 37899999


Q ss_pred             CcccCCCCC
Q psy11501         85 GWMGSVCNV   93 (133)
Q Consensus        85 g~~g~~c~~   93 (133)
                      ||.|..|+.
T Consensus       447 G~~G~~C~~  455 (463)
T 2wg3_C          447 GYLGPQCEQ  455 (463)
T ss_dssp             ---------
T ss_pred             CcccCCCCC
Confidence            999998874

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.53  E-value=2.3e-08  Score=62.98  Aligned_cols=89  Identities=22%  Similarity=0.640  Sum_probs=59.7

Q ss_pred             ccccCCCC---------CCCCC--CC------CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCC------CC
Q psy11501          8 VCGPGRFG---------QNCSQ--EC------QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPS------CI   62 (133)
Q Consensus         8 ~C~~g~~g---------~~c~~--~C------~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~------C~   62 (133)
                      .|++||+|         ..|++  +|      +|.++++|.+.  .++|.|++||+|..++..+.. ..+..      |.
T Consensus        22 ~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~-~~~~~C~dideC~  100 (143)
T 2bou_A           22 RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN-ESENTCQDVDECS  100 (143)
T ss_dssp             EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSS-GGGCCEEECCHHH
T ss_pred             eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcccccc-CCCCCcCCccCcc
Confidence            69999998         35642  34      47777899864  679999999999865421110 01111      32


Q ss_pred             C-CCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCC
Q psy11501         63 N-RCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTP   97 (133)
Q Consensus        63 ~-~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~   97 (133)
                      . ..+|.++++|.+.  .++|.|++||+|......|.+
T Consensus       101 ~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~  138 (143)
T 2bou_A          101 SGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK  138 (143)
T ss_dssp             HTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred             CcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence            1 2367777889765  678999999999877655543

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.48  E-value=4.7e-08  Score=65.75  Aligned_cols=76  Identities=33%  Similarity=0.866  Sum_probs=55.2

Q ss_pred             ccccCCCCCCCCC------------CC-------CCCCCCEEecCCCeeecCCC------CccCCCCccCCCCCCCCCCC
Q psy11501          8 VCGPGRFGQNCSQ------------EC-------QCRNGAECHPATGECSCQPG------FTGSLCEERCPPGTHGPSCI   62 (133)
Q Consensus         8 ~C~~g~~g~~c~~------------~C-------~C~~~g~C~~~~~~C~C~~g------~~G~~C~~~C~~g~~g~~C~   62 (133)
                      .|.+||+|..|+-            .|       +|+++|+|.  .++|.|.++      |+|.+|+..-.      .|.
T Consensus       110 ~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~g~C~C~~gw~~~~~~~G~~Ce~~~~------~C~  181 (217)
T 2p28_B          110 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI------NCE  181 (217)
T ss_dssp             EECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--TTEEEECCCCSTTCCEESTTSCEESS------CSC
T ss_pred             ECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe--CCceECCCCCCCcccEECCCcccCCc------cCC
Confidence            6999999998862            13       367778887  579999999      58999972111      132


Q ss_pred             CC--CCCCCC--CeecCCCCeeeCCCCcccCCCCC
Q psy11501         63 NR--CRCQNG--AICNPANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        63 ~~--~~C~~~--~~C~~~~~~C~C~~g~~g~~c~~   93 (133)
                      ..  .+|.++  |+|.  .++|.|.+||.|..|+.
T Consensus       182 ~~~g~~C~~~~~G~C~--~g~C~C~~G~~G~~C~~  214 (217)
T 2p28_B          182 RYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQH  214 (217)
T ss_dssp             EETTEETTCTTTEEEE--TTEEEECTTEESTTSCE
T ss_pred             CCCCCCCCCCCCcEEe--CCeeECCCCCccCCcCC
Confidence            21  147666  8897  47999999999998863

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=98.44  E-value=8.9e-08  Score=69.19  Aligned_cols=86  Identities=26%  Similarity=0.612  Sum_probs=59.9

Q ss_pred             CCCCCCCCEE-e---cCCCeeecCCCCccCCCCccCCCCCCCCCCCC----------CCCCCCCC-ee---------cCC
Q psy11501         21 ECQCRNGAEC-H---PATGECSCQPGFTGSLCEERCPPGTHGPSCIN----------RCRCQNGA-IC---------NPA   76 (133)
Q Consensus        21 ~C~C~~~g~C-~---~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~----------~~~C~~~~-~C---------~~~   76 (133)
                      .|.|..++.+ .   ...+.|.|.++|.|..|+ .|.++|++..+..          .|.|...+ .|         ...
T Consensus       254 ~C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce-~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~  332 (375)
T 4aqt_A          254 RCKCNGHASECVKNEFDKLMCNCKHNTYGVDCE-KCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGH  332 (375)
T ss_dssp             EECCTTSCSCEEECTTSCEEECCCTTEESTTSC-EECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSC
T ss_pred             eecCCCCCcccCCCCCCCeeeeCcCCCcCCCcc-cCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCC
Confidence            3677766543 2   124578999999999998 8999998865421          12333222 22         223


Q ss_pred             CCee-eCCCCcccCCCCCCCCCCccCCCCCCCC
Q psy11501         77 NGQC-LCAPGWMGSVCNVPCTPGMWGQGCTVPC  108 (133)
Q Consensus        77 ~~~C-~C~~g~~g~~c~~~c~~g~~g~~c~~~c  108 (133)
                      .++| .|.+++.|.+|+ .|.+||++....+.|
T Consensus       333 ~G~C~~C~~n~~G~~Ce-~C~~Gyyg~~~~~~C  364 (375)
T 4aqt_A          333 GGHCTNCRDNTDGAKCE-RCRENFFRLGNTEAC  364 (375)
T ss_dssp             CEEECSCTTTEESTTSC-EECSSEECCTTCSSC
T ss_pred             CCCCCCCCCCCcCCCCC-CCCcCcccCcCCCCC
Confidence            6789 599999999999 799999987654444

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.32  E-value=1.6e-07  Score=57.34  Aligned_cols=87  Identities=32%  Similarity=0.803  Sum_probs=53.3

Q ss_pred             EEecC---CCeeecCCCCccCCCCc-cCCCCCCCCCCCCCCCCCCCCeecCC-CCeeeCCCCcc---cCCCCCCCCCCcc
Q psy11501         29 ECHPA---TGECSCQPGFTGSLCEE-RCPPGTHGPSCINRCRCQNGAICNPA-NGQCLCAPGWM---GSVCNVPCTPGMW  100 (133)
Q Consensus        29 ~C~~~---~~~C~C~~g~~G~~C~~-~C~~g~~g~~C~~~~~C~~~~~C~~~-~~~C~C~~g~~---g~~c~~~c~~g~~  100 (133)
                      +|.+.   .++|.|++||+|..++. .|..     .|... +|.  +.|.+. .++|.|++||.   |..|+.+      
T Consensus        15 ~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~-----~C~~~-~C~--~~C~~~~~y~C~C~~Gy~~~~g~~C~di------   80 (118)
T 1dx5_I           15 QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM-----FCNQT-ACP--ADCDPNTQASCECPEGYILDDGFICTDI------   80 (118)
T ss_dssp             EEEECSSSCEEEECCTTEEEETTEEEEEEE-----CCCSS-EEE--CEECTTSTTCEECCTTEEEETTTEEEEC------
T ss_pred             CCCCCCCCCEEeECCCCccccCCCCCcccc-----ccCCC-CCC--CcccCCCCeEeECCCCccCCCCCccccc------
Confidence            78754   57999999999985421 1221     02111 232  456543 67899999998   5555320      


Q ss_pred             CCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501        101 GQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus       101 g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                       ..|...-+|  +++|++..+  +|.|++||+|.
T Consensus        81 -deC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           81 -DECENGGFC--SGVCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             -CHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred             -cccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence             111111145  688988755  89999999874

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.23  E-value=8.5e-07  Score=46.71  Aligned_cols=42  Identities=24%  Similarity=0.527  Sum_probs=30.6

Q ss_pred             cCCCCccCCCCCCCCCCCCCCCCCCCCeec-----C--CCCeeeCCCCcccCCCCC
Q psy11501         45 GSLCEERCPPGTHGPSCINRCRCQNGAICN-----P--ANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        45 G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~-----~--~~~~C~C~~g~~g~~c~~   93 (133)
                      |..|+..+.+      |.+. +|.++++|.     +  ..++|.|++||+|.+|+.
T Consensus         1 G~~c~~~~~e------C~s~-pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~   49 (55)
T 3u7u_G            1 GTSHLVKCAE------KEKT-FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN   49 (55)
T ss_dssp             --CCEEECCS------TTTT-TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred             CCCCcccCCC------CcCC-CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence            3455555555      6655 899999994     2  268999999999999985

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=98.15  E-value=1e-06  Score=64.09  Aligned_cols=59  Identities=41%  Similarity=0.824  Sum_probs=46.4

Q ss_pred             CCCccccccccCCCCC-----------CCCCCCCCCCCCE-Ee------------------cCCCeee-cCCCCccCCCC
Q psy11501          1 MGTHCEEVCGPGRFGQ-----------NCSQECQCRNGAE-CH------------------PATGECS-CQPGFTGSLCE   49 (133)
Q Consensus         1 ~g~~c~~~C~~g~~g~-----------~c~~~C~C~~~g~-C~------------------~~~~~C~-C~~g~~G~~C~   49 (133)
                      +|..|+ +|.+||+|.           .| ++|.|.+++. |.                  ..++.|. |..+++|.+|+
T Consensus       295 ~G~~CE-rC~pGy~g~p~~~at~~~~~~C-~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE  372 (403)
T 2y38_A          295 CGGSCD-RCCPGFNQQPWKPATTDSANEC-QSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCE  372 (403)
T ss_dssp             ESSSCC-EECTTCCSSCCCCCCSSCCCCC-CCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSC
T ss_pred             cCCCCC-CCCccccCCcccccccCCCccc-cccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCC
Confidence            488999 899999986           34 4678876653 62                  2467995 99999999998


Q ss_pred             ccCCCCCCCCCCC
Q psy11501         50 ERCPPGTHGPSCI   62 (133)
Q Consensus        50 ~~C~~g~~g~~C~   62 (133)
                       +|.+||+|....
T Consensus       373 -rC~~GYyg~p~~  384 (403)
T 2y38_A          373 -RCLPGFFRAPDQ  384 (403)
T ss_dssp             -EECTTCEECTTS
T ss_pred             -cCCCCccCCCCC
Confidence             899999986554

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.14  E-value=1.3e-07  Score=60.67  Aligned_cols=103  Identities=23%  Similarity=0.620  Sum_probs=60.5

Q ss_pred             CCCCCCEEecC--CCeeecCCCCc----cCCCCccCCCCCCCCCCCCC-CCC--CCCCeecCC------CCeeeCCCCcc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFT----GSLCEERCPPGTHGPSCINR-CRC--QNGAICNPA------NGQCLCAPGWM   87 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~-~~C--~~~~~C~~~------~~~C~C~~g~~   87 (133)
                      +|. +++|.+.  +|+|.|++||+    |..|+ ...++    .|... .+|  .+.+.|.+.      .++|.|++||.
T Consensus        11 ~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~----~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~   84 (162)
T 1uzk_A           11 TCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSG----NCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA   84 (162)
T ss_dssp             SSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCE----EEEEEC----------CEEEEEEEECHHHHHTTTCCE
T ss_pred             CCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCC----cccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCC
Confidence            354 5789754  67999999998    77776 22210    02110 011  224455432      46889999998


Q ss_pred             -cCCCCC-----------CCCC--CccCCC----CCCC--C-----CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         88 -GSVCNV-----------PCTP--GMWGQG----CTVP--C-----ECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        88 -g~~c~~-----------~c~~--g~~g~~----c~~~--c-----~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                       +..|+.           .|++  ||.+..    |.+.  |     .|.+ ++|+++.+  +|.|++||+|.
T Consensus        85 ~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~  155 (162)
T 1uzk_A           85 WGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLN  155 (162)
T ss_dssp             ETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBC
T ss_pred             cCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCC
Confidence             665551           2444  777642    3222  2     3654 69988755  89999999985

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.07  E-value=3e-06  Score=53.56  Aligned_cols=61  Identities=36%  Similarity=0.848  Sum_probs=44.3

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCC-CCCCCCCee-cCC--CCeeeCCCCcc----cCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINR-CRCQNGAIC-NPA--NGQCLCAPGWM----GSVCN   92 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~-~~C~~~~~C-~~~--~~~C~C~~g~~----g~~c~   92 (133)
                      +|.++++|.+.  .+.|.|++||+|..|+.. .+      |... .+|.+  +| .+.  .++|.|++||.    |..|+
T Consensus        55 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-de------C~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~  125 (146)
T 1x7a_L           55 PCLNGGLCKDDINSYECWCQVGFEGKNCELD-AT------CNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCK  125 (146)
T ss_dssp             SSCTTCEEEECSSCEEEECCSSEESTTTCEE-CC------TTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred             CCCCCCEeECCCCCEEEecCCCCcCCcCCCC-cc------ccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence            68888999864  679999999999999743 22      5432 23443  67 544  67899999998    66665

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.06  E-value=5.1e-06  Score=47.31  Aligned_cols=63  Identities=33%  Similarity=0.820  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcc--cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWM--GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~--g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      |....+|.+ +.|.+.  .++|.|++||.  |..|+.+       ..|...-+|.+ ++|.+..+  +|.|++||+|.
T Consensus         8 C~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di-------deC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~   76 (82)
T 1emn_A            8 CKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT-------DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG   76 (82)
T ss_dssp             SSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC-------CGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred             CCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc-------ccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence            443235765 688765  68999999997  7666421       12221124655 58988755  89999999985

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.05  E-value=3.2e-06  Score=64.83  Aligned_cols=85  Identities=28%  Similarity=0.750  Sum_probs=59.6

Q ss_pred             ccccccccCCCC--CCCCC--CC---C--CCCCC---EEecC--CCeee-cCCCCccCCCCc-----------cCCCCCC
Q psy11501          4 HCEEVCGPGRFG--QNCSQ--EC---Q--CRNGA---ECHPA--TGECS-CQPGFTGSLCEE-----------RCPPGTH   57 (133)
Q Consensus         4 ~c~~~C~~g~~g--~~c~~--~C---~--C~~~g---~C~~~--~~~C~-C~~g~~G~~C~~-----------~C~~g~~   57 (133)
                      .|. .|++||+|  ..|+.  +|   +  |.+++   +|.+.  .++|. |++||+|..|+.           .|..   
T Consensus        26 ~C~-~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d---  101 (634)
T 1yo8_A           26 SCG-FCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP---  101 (634)
T ss_dssp             EEC-CCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE---
T ss_pred             ECC-cCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccc---
Confidence            443 69999998  67864  56   3  88877   89854  67998 999999988641           1211   


Q ss_pred             CCCCCC-CCCCCCCCeecCC------CCeeeCCCCccc--CCCC
Q psy11501         58 GPSCIN-RCRCQNGAICNPA------NGQCLCAPGWMG--SVCN   92 (133)
Q Consensus        58 g~~C~~-~~~C~~~~~C~~~------~~~C~C~~g~~g--~~c~   92 (133)
                      -..|.. ..+|.+++.|.+.      .++|.|++||.|  ..|+
T Consensus       102 ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A          102 ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred             cccccCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence            122543 2368778888653      579999999998  5664

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.05  E-value=6.2e-07  Score=66.59  Aligned_cols=54  Identities=37%  Similarity=1.125  Sum_probs=21.5

Q ss_pred             CCCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccC
Q psy11501         66 RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQ  132 (133)
Q Consensus        66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~  132 (133)
                      +|.+ +.|.. .++|.|.+||+|..|+.        ..|..  +|.++|+|+.. ++|.|++||+|.
T Consensus       398 ~C~n-G~C~~-~~~C~C~~G~~G~~C~~--------~~C~~--~C~~~g~C~~~-~~C~C~~G~~G~  451 (463)
T 2wg3_C          398 LCRN-GYCTP-TGKCCCSPGWEGDFCRT--------AKCEP--ACRHGGVCVRP-NKCLCKKGYLGP  451 (463)
T ss_dssp             HCCS-EEECT-TSCEEECTTEESTTSCE--------ECC----------------------------
T ss_pred             CCCC-CccCC-CCeECCCCCcCCCcCCc--------CcCCC--CCCCCCEECCC-CEEECCCCcccC
Confidence            3666 78974 46899999999999863        13433  78899999764 689999999986

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.03  E-value=4.1e-06  Score=50.63  Aligned_cols=57  Identities=32%  Similarity=0.804  Sum_probs=39.4

Q ss_pred             CCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCC---eeccCCC--ceeCCCCCcc
Q psy11501         67 CQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGA---SCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus        67 C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g---~C~~~~g--~C~C~~g~~G  131 (133)
                      |.++++|.+.  .++|.|++||.|..|+..-.        .++|...+++   +|++..+  +|.|++||++
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~--------~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~   85 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS--------FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKL   85 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEESTTSCEECC--------SSSSSSGGGGCSSEEEECSSSEEEECCTTEEE
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCc--------CCcCcCCCCCCCCEeECCCCCEEeECCCCeeE
Confidence            7788899765  67999999999998874210        0112111223   8887654  8999999986

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.01  E-value=7.7e-06  Score=49.41  Aligned_cols=63  Identities=24%  Similarity=0.608  Sum_probs=42.4

Q ss_pred             CCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         24 CRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        24 C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      |.++++|.+.  .++|.|++||+|..|+.....    ..|... ..|..  +|.+.  .++|.|++||.+....
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~----~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g   89 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSF----LNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDDL   89 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEESTTSCEECCS----SSSSSGGGGCSS--EEEECSSSEEEECCTTEEECTTS
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcC----CcCcCCCCCCCC--EeECCCCCEEeECCCCeeECCCC
Confidence            7788999754  679999999999999843220    013221 12322  77654  6799999999965433

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.97  E-value=5.6e-06  Score=47.11  Aligned_cols=59  Identities=24%  Similarity=0.669  Sum_probs=41.7

Q ss_pred             CCCCCCEEecC--CCeeecCCCCc--cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFT--GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSV   90 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~--G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~   90 (133)
                      +|.+ ++|.+.  .++|.|++||+  |..|+ ...+      |....+|.+ ++|.+.  .++|.|++||.|..
T Consensus        13 ~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dide------C~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           13 VCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDE------CSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             SCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCG------GGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred             CcCC-CEEEecCCCEEEECCCCeECCCCccC-Cccc------ccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence            3544 788754  68999999997  88885 3333      543336765 488765  67999999998753

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.96  E-value=9.5e-06  Score=51.21  Aligned_cols=60  Identities=27%  Similarity=0.832  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC-CCCCCCCCee-ccCCC--ceeCCCCCc
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV-PCECFNGASC-HHVTG--ECQCEPGFK  130 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~-~c~C~~~g~C-~~~~g--~C~C~~g~~  130 (133)
                      |... +|.++++|.+.  .++|.|++||.|..|+..       ..|.. +..|.+  +| ++..+  +|.|++||+
T Consensus        51 C~~~-pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-------deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~  116 (146)
T 1x7a_L           51 CEPN-PCLNGGLCKDDINSYECWCQVGFEGKNCELD-------ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYR  116 (146)
T ss_dssp             CSSC-SSCTTCEEEECSSCEEEECCSSEESTTTCEE-------CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEE
T ss_pred             CCCC-CCCCCCEeECCCCCEEEecCCCCcCCcCCCC-------ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcE
Confidence            5433 78888999765  679999999999988742       22322 123433  78 66543  899999998

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.95  E-value=4.5e-06  Score=43.89  Aligned_cols=31  Identities=35%  Similarity=0.783  Sum_probs=25.1

Q ss_pred             CCCCCCEEe-----c--CCCeeecCCCCccCCCCccCC
Q psy11501         23 QCRNGAECH-----P--ATGECSCQPGFTGSLCEERCP   53 (133)
Q Consensus        23 ~C~~~g~C~-----~--~~~~C~C~~g~~G~~C~~~C~   53 (133)
                      +|.++|+|.     +  ..++|.|++||+|.+|+....
T Consensus        15 pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~   52 (55)
T 3u7u_G           15 FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM   52 (55)
T ss_dssp             TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred             CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence            799999994     2  267999999999999986433

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.90  E-value=1.3e-06  Score=53.26  Aligned_cols=73  Identities=27%  Similarity=0.736  Sum_probs=48.2

Q ss_pred             ccccCCCCCCCCC-CC--CCCCC---CEEecC-CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC-
Q psy11501          8 VCGPGRFGQNCSQ-EC--QCRNG---AECHPA-TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA-   76 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C--~C~~~---g~C~~~-~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~-   76 (133)
                      .|++||.|..... +|  +|.++   +.|.+. .+.|.|++||+   |..|+ ...+      |....+|  +++|.+. 
T Consensus        27 ~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~-dide------C~~~~~C--~~~C~n~~   97 (118)
T 1dx5_I           27 VCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICT-DIDE------CENGGFC--SGVCHNLP   97 (118)
T ss_dssp             ECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEE-ECCH------HHHCSSC--SSEEEECS
T ss_pred             ECCCCccccCCCCCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccc-cccc------cCCCCCC--cCeEEeCC
Confidence            6999999875421 22  23332   566543 67999999999   77774 3232      4332356  4678755 


Q ss_pred             -CCeeeCCCCcccC
Q psy11501         77 -NGQCLCAPGWMGS   89 (133)
Q Consensus        77 -~~~C~C~~g~~g~   89 (133)
                       .++|.|++||.+.
T Consensus        98 g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           98 GTFECICGPDSALA  111 (118)
T ss_dssp             SSEEEEECSSSSCE
T ss_pred             CCEEEECCCCCccC
Confidence             6899999999864

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.88  E-value=5.4e-06  Score=52.05  Aligned_cols=63  Identities=32%  Similarity=0.805  Sum_probs=43.5

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCC---eecCC---CCeeeCCCCcc----cCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGA---ICNPA---NGQCLCAPGWM----GSV   90 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~---~C~~~---~~~C~C~~g~~----g~~   90 (133)
                      +|.++++|.+.  .+.|.|++||+|..|+.....      +. .+++.+++   +|.+.   .++|.|++||.    |..
T Consensus        54 pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~------c~-~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~  126 (142)
T 2c4f_L           54 PCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDD------QL-ICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVS  126 (142)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTEESTTSCEEGGG------CC-STTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSC
T ss_pred             CcCCCCEEeCCCCCEEeeCCCCccCCccccCccc------cc-cccCCCCCccCEeECCCCCCEEEECCCCceECCCCCC
Confidence            68888999864  579999999999999742111      11 11333333   67654   57899999999    666


Q ss_pred             CC
Q psy11501         91 CN   92 (133)
Q Consensus        91 c~   92 (133)
                      |+
T Consensus       127 C~  128 (142)
T 2c4f_L          127 CT  128 (142)
T ss_dssp             EE
T ss_pred             CC
Confidence            65

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.86  E-value=4.7e-05  Score=53.58  Aligned_cols=60  Identities=32%  Similarity=0.759  Sum_probs=45.3

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCC--CCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQNGAICNPA--NGQCLCAPGWMGSV   90 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~--~~~C~~~~~C~~~--~~~C~C~~g~~g~~   90 (133)
                      +|.++++|.+.  .+.|.|++||+|..|+....+      |..  ..+|.+  .|.+.  .++|.|++||.+..
T Consensus        12 pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~e------C~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~   77 (317)
T 3h5c_B           12 PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNE------CHPERTDGCQH--FCLPGQESYTCSCAQGYRLGE   77 (317)
T ss_dssp             CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSS------CCTTCTTSCSS--EEECCSSSCEEECCTTEECCT
T ss_pred             CCCCCCEeECCCCCeEEECCCCCcCCccccCccc------CCCCCCCCCcC--ccccCCCeeEEeccccccccc
Confidence            68888899754  679999999999999744333      554  136765  78765  78999999998753

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.80  E-value=6e-06  Score=49.44  Aligned_cols=74  Identities=26%  Similarity=0.508  Sum_probs=27.5

Q ss_pred             ccccCCCCCCCCC-CCCCCCC---CEEecC--CCeeecCCCCcc---CCCCccCCCCCCCCCCCCCCCCCCCCeecCC--
Q psy11501          8 VCGPGRFGQNCSQ-ECQCRNG---AECHPA--TGECSCQPGFTG---SLCEERCPPGTHGPSCINRCRCQNGAICNPA--   76 (133)
Q Consensus         8 ~C~~g~~g~~c~~-~C~C~~~---g~C~~~--~~~C~C~~g~~G---~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--   76 (133)
                      ....+|++..|.. +|.-.++   ..|.+.  .+.|.|++||+|   ..|+ ...+      |....+|.  +.|.+.  
T Consensus        17 ~~~~~~~~~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dide------C~~~~~C~--~~C~n~~g   87 (107)
T 2w2n_E           17 TTENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCS--QLCVNLEG   87 (107)
T ss_dssp             ---CCCCSCCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C---------------------------
T ss_pred             ccCCCcCCCCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-cccc------cCCCCCcC--CeeecCCC
Confidence            4567888888864 4521111   378754  689999999998   6665 3232      54323454  467655  


Q ss_pred             CCeeeCCCCcccCC
Q psy11501         77 NGQCLCAPGWMGSV   90 (133)
Q Consensus        77 ~~~C~C~~g~~g~~   90 (133)
                      .++|.|++||.+..
T Consensus        88 sy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           88 GYKCQCEEGFQLDP  101 (107)
T ss_dssp             --------------
T ss_pred             CEEEECCCCceECC
Confidence            68899999998653

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.79  E-value=2e-06  Score=56.86  Aligned_cols=63  Identities=30%  Similarity=0.757  Sum_probs=21.1

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccC-CCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcc----cCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERC-PPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWM----GSVCN   92 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C-~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~----g~~c~   92 (133)
                      +|.++++|.+.  .|.|.|++||+|..|+... .+      |... .+|.+  .|.+.  .+.|.|++||.    |..|+
T Consensus        49 pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~de------C~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~  120 (195)
T 1nfu_B           49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKL------CSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI  120 (195)
T ss_dssp             --------------------------------CCG------GGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCCCEeECCCCCeeEeCCCCceecccccccccc------ccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCccc
Confidence            68888999754  6799999999999997432 22      4321 24544  77654  67999999999    77776


Q ss_pred             C
Q psy11501         93 V   93 (133)
Q Consensus        93 ~   93 (133)
                      .
T Consensus       121 ~  121 (195)
T 1nfu_B          121 P  121 (195)
T ss_dssp             E
T ss_pred             c
Confidence            4

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=97.75  E-value=9.6e-06  Score=58.64  Aligned_cols=60  Identities=28%  Similarity=0.639  Sum_probs=42.5

Q ss_pred             CCCccccccccCCCCCCCC----------CCCCCCCCC-EE---------ecCCCee-ecCCCCccCCCCccCCCCCCCC
Q psy11501          1 MGTHCEEVCGPGRFGQNCS----------QECQCRNGA-EC---------HPATGEC-SCQPGFTGSLCEERCPPGTHGP   59 (133)
Q Consensus         1 ~g~~c~~~C~~g~~g~~c~----------~~C~C~~~g-~C---------~~~~~~C-~C~~g~~G~~C~~~C~~g~~g~   59 (133)
                      +|..|+ +|.+||++..+.          ++|.|..++ .|         ...+|+| .|.++|+|.+|+ .|.+||||.
T Consensus       281 ~G~~Ce-~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce-~C~~Gyyg~  358 (375)
T 4aqt_A          281 YGVDCE-KCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCE-RCRENFFRL  358 (375)
T ss_dssp             ESTTSC-EECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSC-EECSSEECC
T ss_pred             cCCCcc-cCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCC-CCCcCcccC
Confidence            367787 888888876432          135565443 23         2346889 499999999998 899999987


Q ss_pred             CCC
Q psy11501         60 SCI   62 (133)
Q Consensus        60 ~C~   62 (133)
                      ...
T Consensus       359 ~~~  361 (375)
T 4aqt_A          359 GNT  361 (375)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.75  E-value=1.1e-05  Score=50.62  Aligned_cols=58  Identities=33%  Similarity=0.804  Sum_probs=41.3

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCC---eeccCCC---ceeCCCCCc
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGA---SCHHVTG---ECQCEPGFK  130 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g---~C~~~~g---~C~C~~g~~  130 (133)
                      +|.++++|.+.  .++|.|++||.|..|+....      .+ ..+.+.+++   +|++..+   +|.|++||+
T Consensus        54 pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~------~c-~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~  119 (142)
T 2c4f_L           54 PCQNGGSCKDQLQSYICFCLPAFEGRNCETHKD------DQ-LICVNENGGCEQYCSDHTGTKRSCRCHEGYS  119 (142)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTEESTTSCEEGG------GC-CSTTTGGGGCSSEEECCTTSCCEEECCTTEE
T ss_pred             CcCCCCEEeCCCCCEEeeCCCCccCCccccCcc------cc-ccccCCCCCccCEeECCCCCCEEEECCCCce
Confidence            78888999765  67999999999998874100      11 113444555   8877543   899999998

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.73  E-value=2.8e-06  Score=52.88  Aligned_cols=62  Identities=31%  Similarity=0.778  Sum_probs=19.7

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCccC-CCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcc----cCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEERC-PPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWM----GSVCN   92 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C-~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~----g~~c~   92 (133)
                      +|.++++|.+.  .+.|.|++||+|..|+... .+      |... .+|.+  +|.+.  .++|.|++||.    |..|+
T Consensus        49 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~------C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B           49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKL------CSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI  120 (134)
T ss_dssp             --------------------------------CCG------GGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCcCCcccCCCCEEeeCCCCccCCccccCCCCc------cccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccC
Confidence            68888899754  6799999999999997422 22      3321 23543  67644  57899999999    76665

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.68  E-value=0.0001  Score=51.82  Aligned_cols=64  Identities=27%  Similarity=0.745  Sum_probs=44.1

Q ss_pred             CCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC--CCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         60 SCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV--PCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        60 ~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~--~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|... +|.++++|.+.  .++|.|++||.|..|+..-      ..|..  .-+|.+  +|.+..+  +|.|++||.+.
T Consensus         7 ~C~~~-pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~------~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B            7 PCISQ-PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK------NECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             CTTSC-CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS------SSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred             cCCCC-CCCCCCEeECCCCCeEEECCCCCcCCccccCc------ccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence            35443 78888889765  6799999999999887310      12321  124554  7877644  89999999874

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.62  E-value=2.1e-05  Score=49.52  Aligned_cols=38  Identities=34%  Similarity=0.794  Sum_probs=25.7

Q ss_pred             CCCCCcc---CCCCCCC--C-----CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         94 PCTPGMW---GQGCTVP--C-----ECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        94 ~c~~g~~---g~~c~~~--c-----~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|++||.   |..|++.  |     .|.+ ++|++..+  +|.|++||+|.
T Consensus        91 ~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~  140 (147)
T 2w86_A           91 ICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLD  140 (147)
T ss_dssp             TTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBC
T ss_pred             cCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccC
Confidence            4566663   5555432  2     3665 49988765  89999999985

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.52  E-value=1.6e-05  Score=52.55  Aligned_cols=62  Identities=27%  Similarity=0.754  Sum_probs=16.6

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC-CCCCCCCCeeccCCC--ceeCCCCCc
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV-PCECFNGASCHHVTG--ECQCEPGFK  130 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~-~c~C~~~g~C~~~~g--~C~C~~g~~  130 (133)
                      |... +|.++++|.+.  .+.|.|++||.|..|+....     ..|.. +..|.+  +|.+..+  +|.|++||+
T Consensus        45 C~~~-pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~-----deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~  111 (195)
T 1nfu_B           45 CETS-PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT  111 (195)
T ss_dssp             -------------------------------------C-----CGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred             cCCC-CCCCCCEeECCCCCeeEeCCCCceecccccccc-----ccccCCCCCCCC--EeECCCCCeEEECCCCce
Confidence            4433 78888899765  67999999999998874110     11221 123543  8877654  899999998

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.47  E-value=2.1e-05  Score=48.91  Aligned_cols=58  Identities=28%  Similarity=0.753  Sum_probs=16.3

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC-CCCCCCCCeeccCCC--ceeCCCCCc
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV-PCECFNGASCHHVTG--ECQCEPGFK  130 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~-~c~C~~~g~C~~~~g--~C~C~~g~~  130 (133)
                      +|.++++|.+.  .++|.|++||.|..|+....     ..|.. +..|.+  +|++..+  +|.|++||+
T Consensus        49 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~-----d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~  111 (134)
T 2vh0_B           49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT  111 (134)
T ss_dssp             --------------------------------C-----CGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred             CCCCcCCcccCCCCEEeeCCCCccCCccccCCC-----CccccCCCCCCC--EeECCCCCEEEECCCCcE
Confidence            68888889765  67999999999988874110     11211 113443  7877654  899999998

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.47  E-value=3.9e-05  Score=56.19  Aligned_cols=27  Identities=37%  Similarity=1.046  Sum_probs=0.0

Q ss_pred             CCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|.+.. +|.|++||.|..|+.
T Consensus       372 ~C~ngg~C~~~~-~C~C~~G~~G~~Ce~  398 (426)
T 3zyj_B          372 HCQNGGTCHNNV-RCLCPAAYTGILCEK  398 (426)
T ss_dssp             ----------------------------
T ss_pred             cCCCCCCcCCCC-CCcCCCCCcCCCCcC
Confidence            677888887655 889999999988873

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.46  E-value=4.1e-05  Score=45.73  Aligned_cols=52  Identities=35%  Similarity=0.837  Sum_probs=16.4

Q ss_pred             eecCC--CCeeeCCCCccc---CCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         72 ICNPA--NGQCLCAPGWMG---SVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        72 ~C~~~--~~~C~C~~g~~g---~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|.+.  .++|.|++||.|   ..|+.+       ..|..+-+|.  ++|++..+  +|.|++||++.
T Consensus        42 ~C~n~~g~y~C~C~~Gy~g~~g~~C~di-------deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~  100 (107)
T 2w2n_E           42 VCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD  100 (107)
T ss_dssp             EEECCSBSCEEECCTTCEEETTTEEEC-----------------------------------------
T ss_pred             EeEeCCCCeEEECCCCccccCCCccccc-------cccCCCCCcC--CeeecCCCCEEEECCCCceEC
Confidence            67654  689999999998   445421       1222111343  67877644  89999999874

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.45  E-value=8.7e-05  Score=35.91  Aligned_cols=31  Identities=32%  Similarity=0.880  Sum_probs=24.8

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      |... +|.++++|.+.  .++|.|++||.|.+|+
T Consensus         6 C~~~-pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            6 CESN-PCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             TTTC-CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CCCC-CCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            4433 78999999754  5789999999999886

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.41  E-value=7.8e-05  Score=36.07  Aligned_cols=27  Identities=44%  Similarity=0.992  Sum_probs=23.2

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~   49 (133)
                      +|.++++|.+.  .+.|.|++||+|..|+
T Consensus        10 pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B           10 PCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            68888999754  5789999999999986

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.39  E-value=0.00013  Score=39.28  Aligned_cols=32  Identities=50%  Similarity=1.041  Sum_probs=26.2

Q ss_pred             CCCCCCEEec-------CCCeeecCCCCccCCCCccCCC
Q psy11501         23 QCRNGAECHP-------ATGECSCQPGFTGSLCEERCPP   54 (133)
Q Consensus        23 ~C~~~g~C~~-------~~~~C~C~~g~~G~~C~~~C~~   54 (133)
                      +|.++|+|.+       ..+.|.|++||+|..|+....+
T Consensus        13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~   51 (63)
T 1hae_A           13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM   51 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCS
T ss_pred             cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCc
Confidence            6889999974       3678999999999999865444

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.31  E-value=7.7e-05  Score=42.64  Aligned_cols=58  Identities=29%  Similarity=0.767  Sum_probs=37.1

Q ss_pred             CCCCCCeecCC--CCeeeCCCCccc-----CCCCCCCCCCccCCCCC-CCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMG-----SVCNVPCTPGMWGQGCT-VPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g-----~~c~~~c~~g~~g~~c~-~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      +|.+ ++|.+.  .++|.|++||.+     ..|+.+       ..|. .+..|. +++|.+..+  +|.|++||++.
T Consensus        12 ~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di-------deC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~   79 (86)
T 1lmj_A           12 LCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI-------DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   79 (86)
T ss_dssp             TTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC-------CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             CCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc-------ccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence            3654 478654  679999999984     334310       1111 122354 479988765  89999999975

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.26  E-value=0.00019  Score=35.92  Aligned_cols=28  Identities=29%  Similarity=0.746  Sum_probs=23.5

Q ss_pred             CCCCCCEEe--c--CCCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECH--P--ATGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~--~--~~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++++|.  +  ..+.|.|++||+|..|+.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence            688899997  3  267899999999999974

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.21  E-value=0.00052  Score=35.52  Aligned_cols=28  Identities=32%  Similarity=0.902  Sum_probs=23.9

Q ss_pred             CCCCCCEEe--cC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECH--PA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~--~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++|+|.  +.  .+.|.|++||+|..|+.
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence            688899997  43  67899999999999984

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.13  E-value=0.00016  Score=37.54  Aligned_cols=30  Identities=30%  Similarity=0.711  Sum_probs=24.5

Q ss_pred             CCCCCCEEe--cC--CCeeecCCCCccCCCCccC
Q psy11501         23 QCRNGAECH--PA--TGECSCQPGFTGSLCEERC   52 (133)
Q Consensus        23 ~C~~~g~C~--~~--~~~C~C~~g~~G~~C~~~C   52 (133)
                      +|.++|+|.  +.  .+.|.|++||+|.+|+..-
T Consensus        13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~   46 (53)
T 1nql_B           13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD   46 (53)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred             CCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence            588899997  33  5789999999999998543

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.13  E-value=0.00035  Score=34.88  Aligned_cols=28  Identities=29%  Similarity=0.730  Sum_probs=23.5

Q ss_pred             CCCCCCeec--CC--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICN--PA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|.  +.  .++|.|++||+|.+|+.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence            788999996  32  67999999999999874

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.11  E-value=0.0012  Score=34.18  Aligned_cols=28  Identities=32%  Similarity=0.869  Sum_probs=24.1

Q ss_pred             CCCCCCeec--CC--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICN--PA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|.  +.  .+.|.|++||+|.+|+.
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence            789999997  43  67999999999999975

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.01  E-value=0.00012  Score=45.91  Aligned_cols=22  Identities=27%  Similarity=0.750  Sum_probs=12.0

Q ss_pred             CCCCCeecCC--CCeeeCCCCcccC
Q psy11501         67 CQNGAICNPA--NGQCLCAPGWMGS   89 (133)
Q Consensus        67 C~~~~~C~~~--~~~C~C~~g~~g~   89 (133)
                      |.+ ++|.+.  .++|.|++||.+.
T Consensus       117 C~~-g~C~n~~g~y~C~C~~Gy~g~  140 (147)
T 2w86_A          117 CKN-GLCVNTRGSFKCQCPSGMTLD  140 (147)
T ss_dssp             SSS-SEEEEETTEEEEECCTTCCBC
T ss_pred             CCC-CEEECCCCCEEeeCCCCCccC
Confidence            443 355443  4566666666654

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.00  E-value=0.00098  Score=40.64  Aligned_cols=30  Identities=37%  Similarity=0.874  Sum_probs=24.7

Q ss_pred             CCCCCCCEEecC----CC-eeecCCCCccCCCCcc
Q psy11501         22 CQCRNGAECHPA----TG-ECSCQPGFTGSLCEER   51 (133)
Q Consensus        22 C~C~~~g~C~~~----~~-~C~C~~g~~G~~C~~~   51 (133)
                      |+|.++|+|.+.    .+ .|.|+++|+|.+|++.
T Consensus         1 ~pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~   35 (122)
T 2fd6_A            1 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   35 (122)
T ss_dssp             CCCCSSCEEEECTTTTTCEEEECCTTEESTTSCEE
T ss_pred             CCCCCcCCcCCCcccCCCCCccCCCCCCCcccccc
Confidence            478999999754    34 8999999999999853

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=96.99  E-value=0.00017  Score=41.33  Aligned_cols=57  Identities=28%  Similarity=0.663  Sum_probs=37.5

Q ss_pred             CCCCCEEecC--CCeeecCCCCc----cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         24 CRNGAECHPA--TGECSCQPGFT----GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        24 C~~~g~C~~~--~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      | ++++|.+.  .++|.|++||+    |..|+ ...+      |.. .+|.  ++|.+.  .++|.|+ ++.|..++
T Consensus        13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dide------C~~-~~C~--~~C~n~~g~y~C~C~-g~~G~~~~   77 (87)
T 1z6c_A           13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDE------CSE-NMCA--QLCVNYPGGYTCYCD-GKKGFKLA   77 (87)
T ss_dssp             B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCH------HHH-SCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred             C-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCe------eCC-CCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence            5 55778643  68999999998    66664 2222      432 2565  578765  6899997 66665554

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.97  E-value=0.00028  Score=36.46  Aligned_cols=37  Identities=32%  Similarity=0.633  Sum_probs=29.0

Q ss_pred             ccccCCCCCCCCCCCCCCCCCEEec----C--CCeeecCCCCccCCCCc
Q psy11501          8 VCGPGRFGQNCSQECQCRNGAECHP----A--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus         8 ~C~~g~~g~~c~~~C~C~~~g~C~~----~--~~~C~C~~g~~G~~C~~   50 (133)
                      .|+++|.      .-+|.++|+|..    .  .+.|.|++||+|.+|+.
T Consensus         6 ~C~~g~~------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A            6 KCPETFD------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             CCCHHHH------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             ECCCCCc------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            5888876      125788899984    2  46899999999999984

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.93  E-value=0.00035  Score=36.29  Aligned_cols=30  Identities=27%  Similarity=0.726  Sum_probs=24.6

Q ss_pred             CCCCCCCeec--CC--CCeeeCCCCcccCCCCCC
Q psy11501         65 CRCQNGAICN--PA--NGQCLCAPGWMGSVCNVP   94 (133)
Q Consensus        65 ~~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~~   94 (133)
                      .+|.++++|.  +.  .+.|.|++||+|.+|+..
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~   45 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR   45 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence            3789999996  33  579999999999999853

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.92  E-value=0.00039  Score=34.97  Aligned_cols=27  Identities=33%  Similarity=0.886  Sum_probs=22.1

Q ss_pred             CCCCCCEEec----CCCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHP----ATGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~----~~~~C~C~~g~~G~~C~~   50 (133)
                      +|.+ |+|.+    ..+.|.|++||+|.+|+.
T Consensus        13 pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A           13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence            5777 79974    257899999999999974

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.86  E-value=0.0006  Score=36.05  Aligned_cols=30  Identities=37%  Similarity=0.790  Sum_probs=24.1

Q ss_pred             CCCCCCEEe--c--C--CCeeecCCCCccCCCCccC
Q psy11501         23 QCRNGAECH--P--A--TGECSCQPGFTGSLCEERC   52 (133)
Q Consensus        23 ~C~~~g~C~--~--~--~~~C~C~~g~~G~~C~~~C   52 (133)
                      +|.++|+|.  +  .  .+.|.|++||+|.+|+...
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~   50 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE   50 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence            588999997  2  2  4689999999999998543

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=96.85  E-value=0.00057  Score=39.03  Aligned_cols=53  Identities=30%  Similarity=0.837  Sum_probs=31.6

Q ss_pred             CCCCCeecCC--CCeeeCCCCcc----cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCC--CCCc
Q psy11501         67 CQNGAICNPA--NGQCLCAPGWM----GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCE--PGFK  130 (133)
Q Consensus        67 C~~~~~C~~~--~~~C~C~~g~~----g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~--~g~~  130 (133)
                      | ++++|.+.  .++|.|++||.    |..|+.+       ..|. .-+|.  ++|.+..+  +|.|+  +||.
T Consensus        13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di-------deC~-~~~C~--~~C~n~~g~y~C~C~g~~G~~   75 (87)
T 1z6c_A           13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI-------DECS-ENMCA--QLCVNYPGGYTCYCDGKKGFK   75 (87)
T ss_dssp             B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC-------CHHH-HSCCS--SEECCCSSSCCEECCSSSCCB
T ss_pred             C-CCCEeECCCCCEEEECCCCceECCCCCcCCCc-------CeeC-CCCCC--CEEEccCCCEEEECCCCcCCc
Confidence            5 45677654  67899999998    4444320       1111 01454  68887654  89996  4443

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.82  E-value=7.3e-05  Score=47.72  Aligned_cols=83  Identities=25%  Similarity=0.528  Sum_probs=49.9

Q ss_pred             ccccCCC----CCCCCC--C--CC-----C--CCCCEEecC------CCeeecCCCCc-cCCCCc-----------cCCC
Q psy11501          8 VCGPGRF----GQNCSQ--E--CQ-----C--RNGAECHPA------TGECSCQPGFT-GSLCEE-----------RCPP   54 (133)
Q Consensus         8 ~C~~g~~----g~~c~~--~--C~-----C--~~~g~C~~~------~~~C~C~~g~~-G~~C~~-----------~C~~   54 (133)
                      .|++||.    |..|++  +  |.     |  .+++.|.+.      .+.|.|++||. |..|+.           .|+.
T Consensus        27 ~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~  106 (162)
T 1uzk_A           27 DCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPG  106 (162)
T ss_dssp             ECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTT
T ss_pred             eCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCC
Confidence            6999998    667753  1  41     2  235677643      46899999998 767651           1333


Q ss_pred             --CCCCC----CCCCC-------CCCCCCCeecCC--CCeeeCCCCcccCCC
Q psy11501         55 --GTHGP----SCINR-------CRCQNGAICNPA--NGQCLCAPGWMGSVC   91 (133)
Q Consensus        55 --g~~g~----~C~~~-------~~C~~~~~C~~~--~~~C~C~~g~~g~~c   91 (133)
                        ||.+.    .|.+.       .+|.+ ++|.+.  .++|.|++||.|..-
T Consensus       107 g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d  157 (162)
T 1uzk_A          107 GEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNED  157 (162)
T ss_dssp             CTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTT
T ss_pred             CCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCC
Confidence              66653    22222       13654 588765  789999999988643

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=96.80  E-value=0.00017  Score=41.20  Aligned_cols=58  Identities=28%  Similarity=0.718  Sum_probs=38.0

Q ss_pred             CCCCCEEecC--CCeeecCCCCc-----cCCCCccCCCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501         24 CRNGAECHPA--TGECSCQPGFT-----GSLCEERCPPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWMGSV   90 (133)
Q Consensus        24 C~~~g~C~~~--~~~C~C~~g~~-----G~~C~~~C~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~g~~   90 (133)
                      |.+ ++|.+.  .++|.|++||+     |..|+ ...+      |... ..|. +++|.+.  .++|.|++||.+..
T Consensus        13 C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dide------C~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A           13 CGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDE------CQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             TTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCH------HHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred             CCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-Cccc------ccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence            544 588754  67999999998     55664 2222      3322 1354 3688755  67999999998753

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=96.77  E-value=0.0008  Score=36.06  Aligned_cols=28  Identities=36%  Similarity=0.839  Sum_probs=24.0

Q ss_pred             CCCCCCeecC-------CCCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNP-------ANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~-------~~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|.+       ..++|.|++||+|.+|+.
T Consensus        13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~   47 (63)
T 1hae_A           13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred             cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence            7899999974       267999999999999975

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.65  E-value=0.00063  Score=35.07  Aligned_cols=28  Identities=39%  Similarity=0.776  Sum_probs=23.3

Q ss_pred             CCCCCCeecC----C--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNP----A--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~----~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|..    .  .++|.|++||+|.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             TSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             cCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            6888999974    2  56899999999999874

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.61  E-value=0.00087  Score=35.42  Aligned_cols=30  Identities=37%  Similarity=0.675  Sum_probs=24.2

Q ss_pred             CCCCCCeec--C--C--CCeeeCCCCcccCCCCCCC
Q psy11501         66 RCQNGAICN--P--A--NGQCLCAPGWMGSVCNVPC   95 (133)
Q Consensus        66 ~C~~~~~C~--~--~--~~~C~C~~g~~g~~c~~~c   95 (133)
                      +|.++|+|.  .  .  .+.|.|++||.|.+|+...
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~   50 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE   50 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence            688999996  2  2  4689999999999998643

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.53  E-value=0.0013  Score=33.01  Aligned_cols=28  Identities=25%  Similarity=0.656  Sum_probs=22.7

Q ss_pred             CCCCCCCeecC----CCCeeeCCCCcccCCCCC
Q psy11501         65 CRCQNGAICNP----ANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        65 ~~C~~~~~C~~----~~~~C~C~~g~~g~~c~~   93 (133)
                      .+|.+ |+|..    ..+.|.|++||+|.+|+.
T Consensus        12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A           12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence            37888 79963    257899999999999974

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.51  E-value=0.0039  Score=45.17  Aligned_cols=54  Identities=26%  Similarity=0.627  Sum_probs=37.9

Q ss_pred             CEEecC--CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501         28 AECHPA--TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSV   90 (133)
Q Consensus        28 g~C~~~--~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~   90 (133)
                      ..|.+.  .+.|.|++||.   |..|+ ...+      |....+|..  .|.+.  .++|.|.+||.+..
T Consensus        12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~-dide------C~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~   72 (400)
T 3p5b_L           12 HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP   72 (400)
T ss_dssp             SEEEECSSSEEEECCTTEEECSSSCEE-ECCC------CSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred             CEeECCCCCeEEECCCCCCcCCCCccc-Cchh------hhccCCCCC--ccCCCccceeeeccccccccc
Confidence            578754  67999999998   77775 3333      543335543  67655  78999999998653

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.50  E-value=0.0024  Score=46.25  Aligned_cols=54  Identities=33%  Similarity=0.831  Sum_probs=34.5

Q ss_pred             CCeecCC--CCeeeCCCCcc---cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         70 GAICNPA--NGQCLCAPGWM---GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        70 ~~~C~~~--~~~C~C~~g~~---g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      ...|.+.  .+.|.|++||.   |..|+..       ..|..+..|.+  +|.+..+  +|.|++||.+.
T Consensus        11 ~~~C~~~~~~y~C~C~~G~~~~~~~~C~di-------deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L           11 SHVCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             SSEEEECSSSEEEECCTTEEECSSSCEEEC-------CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred             CCEeECCCCCeEEECCCCCCcCCCCcccCc-------hhhhccCCCCC--ccCCCccceeeecccccccc
Confidence            3577654  67999999998   5555421       12322223432  6777644  89999999864

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=96.47  E-value=0.00094  Score=35.66  Aligned_cols=27  Identities=19%  Similarity=0.500  Sum_probs=23.2

Q ss_pred             CCCCC--CEEecC--CCeeecCCCCc-cCCCC
Q psy11501         23 QCRNG--AECHPA--TGECSCQPGFT-GSLCE   49 (133)
Q Consensus        23 ~C~~~--g~C~~~--~~~C~C~~g~~-G~~C~   49 (133)
                      +|.++  ++|.+.  .|.|.|++||+ |.+|+
T Consensus        18 PC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           18 PCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             SSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             CCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            68887  899864  57899999999 99986

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=96.19  E-value=0.0039  Score=40.61  Aligned_cols=27  Identities=44%  Similarity=1.061  Sum_probs=24.1

Q ss_pred             CCCCCCEEecCCCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~~   50 (133)
                      .|.++|.|. ...+|.|++||+|..|+.
T Consensus       154 ~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          154 GCRNGGFCN-ERRICECPDGFHGPHCEG  180 (188)
T ss_dssp             CCCTTCEEC-TTSCEECCTTCBTTTTCB
T ss_pred             CCCCCCEeC-CCCcccCcCCCCCCCCcC
Confidence            699999997 478999999999999983

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=96.10  E-value=0.001  Score=51.65  Aligned_cols=41  Identities=24%  Similarity=0.575  Sum_probs=36.0

Q ss_pred             ccccCCCCCCCC--CCC--CCCCCCEEecCCCeeecCCCCccCCCCc
Q psy11501          8 VCGPGRFGQNCS--QEC--QCRNGAECHPATGECSCQPGFTGSLCEE   50 (133)
Q Consensus         8 ~C~~g~~g~~c~--~~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~   50 (133)
                      .|.++|.|++|.  ..|  .|+.+|.|.  .++|+|.+||+|..|+.
T Consensus       521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~--~G~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          521 DKQQTWAIDNVYIGDGCLDMCSGHGRCV--QGSCVCDEQWGGLYCDE  565 (725)
T ss_dssp             CTTCCEEEEEEEEESCSSGGGGGSEEEE--TTEEEECTTEESTTSCE
T ss_pred             ccCCCcccccccccCCCCcccCCCcEEC--CCCEeeCCCccCCCcCc
Confidence            689999999998  357  499999998  67999999999999974

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=96.10  E-value=0.0018  Score=34.51  Aligned_cols=28  Identities=18%  Similarity=0.413  Sum_probs=23.5

Q ss_pred             CCCCC--CeecCC--CCeeeCCCCcc-cCCCCC
Q psy11501         66 RCQNG--AICNPA--NGQCLCAPGWM-GSVCNV   93 (133)
Q Consensus        66 ~C~~~--~~C~~~--~~~C~C~~g~~-g~~c~~   93 (133)
                      ||.++  ++|.+.  .+.|.|++||. |.+|+.
T Consensus        18 PC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~   50 (61)
T 2k2s_B           18 PCGPEAAGTCKETNSGYICRCNQGYRISLDGTG   50 (61)
T ss_dssp             SSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred             CCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence            78888  899765  57999999999 988863

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=95.97  E-value=0.058  Score=41.93  Aligned_cols=52  Identities=35%  Similarity=0.859  Sum_probs=29.9

Q ss_pred             eecCC--CCeeeCCCCcc---cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501         72 ICNPA--NGQCLCAPGWM---GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus        72 ~C~~~--~~~C~C~~g~~---g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|.+.  .++|.|++||.   |..|+.+       ..|..+-.|.  .+|.++.+  +|.|++||++.
T Consensus       307 ~C~~~~~~~~C~C~~G~~~~~~~~C~di-------deC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          307 VCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             TCCCCTTCCCCCCCSSSCCCSSSCCCCC-------CCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred             CcccCCCCcEEeCCCCeEcCCCCcccCc-------cccCCCCccc--cccccCCCCeeeeeecccccC
Confidence            45443  67888888887   4444320       1121111232  36666544  89999999863

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=95.59  E-value=0.013  Score=38.19  Aligned_cols=27  Identities=37%  Similarity=0.979  Sum_probs=23.8

Q ss_pred             CCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~   93 (133)
                      .|.++|.|. ...+|.|++||.|.+|+.
T Consensus       154 ~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          154 GCRNGGFCN-ERRICECPDGFHGPHCEG  180 (188)
T ss_dssp             CCCTTCEEC-TTSCEECCTTCBTTTTCB
T ss_pred             CCCCCCEeC-CCCcccCcCCCCCCCCcC
Confidence            689999996 478999999999999984

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.18  E-value=0.026  Score=44.62  Aligned_cols=51  Identities=35%  Similarity=0.891  Sum_probs=31.2

Q ss_pred             eecCC--CCeeeCCCCcc---cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCcc
Q psy11501         72 ICNPA--NGQCLCAPGWM---GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus        72 ~C~~~--~~~C~C~~g~~---g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G  131 (133)
                      .|.+.  .+.|.|++||.   |..|+.+       ..|..+..|  ..+|.+..+  +|.|++||..
T Consensus       325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~di-------deC~~~~~C--~~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          325 VCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTC--SQLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             EEEECSBSEEEECCTTCEEETTTEEECC-------CCCSSSSSC--TTTCCBCSSCBCCCCCSSEEC
T ss_pred             cccCCCCCcccCCCCCCccCCCCccccC-------cccCCCCCC--CCeeecCCCCceeecCCCCEe
Confidence            56544  67899999996   5555421       122212223  246766544  8999999975

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=94.55  E-value=0.011  Score=42.57  Aligned_cols=55  Identities=25%  Similarity=0.791  Sum_probs=16.2

Q ss_pred             EEecC--CCeeecCCCCc----cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcc----cCCCC
Q psy11501         29 ECHPA--TGECSCQPGFT----GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWM----GSVCN   92 (133)
Q Consensus        29 ~C~~~--~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~----g~~c~   92 (133)
                      .|.+.  .+.|.|++||.    |..|+ ...+      |....+|..  .|.+.  .++|.|++||.    +..|.
T Consensus        16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~e------C~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           16 KCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNE------CAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             -------------------------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEE
T ss_pred             CCcCCCCCcEeECCCCceECCCCCccC-ccce------eCCcCcccC--cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence            56433  57999999998    77785 3333      543335654  37655  78999999998    55564

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=94.13  E-value=0.045  Score=34.22  Aligned_cols=31  Identities=35%  Similarity=0.856  Sum_probs=25.6

Q ss_pred             CCCCCCCCEEecC----CC-eeecCCCCccCCCCcc
Q psy11501         21 ECQCRNGAECHPA----TG-ECSCQPGFTGSLCEER   51 (133)
Q Consensus        21 ~C~C~~~g~C~~~----~~-~C~C~~g~~G~~C~~~   51 (133)
                      .|+|.++|+|...    .+ .|.|+++|.|..|++.
T Consensus        12 ~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~   47 (145)
T 2i9a_A           12 NCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   47 (145)
T ss_dssp             CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred             CCCCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence            5799999999753    23 7999999999999853

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=93.99  E-value=0.029  Score=33.98  Aligned_cols=28  Identities=32%  Similarity=0.772  Sum_probs=22.4

Q ss_pred             CCCCCCeecCC----CC-eeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA----NG-QCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~----~~-~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|.+.    .+ +|.|+++|+|..|++
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~   34 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   34 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCE
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccc
Confidence            68888899643    34 899999999998875

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.87  E-value=0.043  Score=27.90  Aligned_cols=27  Identities=30%  Similarity=0.882  Sum_probs=20.6

Q ss_pred             CCCCCCeecCC----CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA----NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~----~~~C~C~~g~~g~~c~~   93 (133)
                      .|.++ +|...    ...|.|++||+|.+|+.
T Consensus        15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             cccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence            57775 77532    56899999999999874

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=93.84  E-value=0.012  Score=45.83  Aligned_cols=45  Identities=22%  Similarity=0.585  Sum_probs=33.1

Q ss_pred             ecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501         38 SCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        38 ~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~~   93 (133)
                      .|.++|+|.+|...       ..|..  .|..+|.|.  .++|.|.+||.|..|..
T Consensus       521 ~C~~gw~g~dc~i~-------~~Cp~--~C~ghG~C~--~G~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          521 DKQQTWAIDNVYIG-------DGCLD--MCSGHGRCV--QGSCVCDEQWGGLYCDE  565 (725)
T ss_dssp             CTTCCEEEEEEEEE-------SCSSG--GGGGSEEEE--TTEEEECTTEESTTSCE
T ss_pred             ccCCCccccccccc-------CCCCc--ccCCCcEEC--CCCEeeCCCccCCCcCc
Confidence            56778888777610       11322  578889998  68999999999999874

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=93.63  E-value=0.034  Score=38.63  Aligned_cols=58  Identities=31%  Similarity=0.732  Sum_probs=36.3

Q ss_pred             CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCC-----CCCCC---CCCCCCCeecCCCCeeeCCCCcc
Q psy11501         24 CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGP-----SCINR---CRCQNGAICNPANGQCLCAPGWM   87 (133)
Q Consensus        24 C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~-----~C~~~---~~C~~~~~C~~~~~~C~C~~g~~   87 (133)
                      |+.+|++.  -+.|.|.+||.|..|+  |+..-...     .|...   ..|...|.|.  -++|.|...|.
T Consensus       198 C~g~G~~~--CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~--CG~C~C~~~~~  263 (280)
T 2p26_A          198 CHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDV  263 (280)
T ss_dssp             GGGSEEEE--TTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEEE--TTEEEECCCSS
T ss_pred             cCCCCeEC--CCceeCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceEe--CCeeECcCCCC
Confidence            44445554  5789999999999996  43321100     34321   1366677776  67899977754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=93.28  E-value=0.023  Score=40.86  Aligned_cols=50  Identities=30%  Similarity=0.808  Sum_probs=11.6

Q ss_pred             eecCC--CCeeeCCCCcc----cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCc
Q psy11501         72 ICNPA--NGQCLCAPGWM----GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFK  130 (133)
Q Consensus        72 ~C~~~--~~~C~C~~g~~----g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~  130 (133)
                      .|.+.  .+.|.|++||.    |..|+..       ..|...-.|.+  .|.+..+  +|.|++||.
T Consensus        16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~-------~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~   73 (386)
T 3v65_B           16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDV-------NECAEEGYCSQ--GCTNSEGAFQCWCEAGYE   73 (386)
T ss_dssp             -------------------------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred             CCcCCCCCcEeECCCCceECCCCCccCcc-------ceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence            55433  47899999998    6666421       11211113433  3766544  899999997

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.26  E-value=0.069  Score=27.10  Aligned_cols=27  Identities=33%  Similarity=0.940  Sum_probs=20.3

Q ss_pred             CCCCCCEEec----CCCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHP----ATGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~----~~~~C~C~~g~~G~~C~~   50 (133)
                      .|.++ +|..    ....|.|++||+|..|+.
T Consensus        15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             cccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence            35664 8863    256899999999999973

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=93.25  E-value=0.02  Score=35.99  Aligned_cols=28  Identities=43%  Similarity=0.962  Sum_probs=23.1

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++++|.+.  .++|.|++||.|..|+.
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~  155 (162)
T 1g1s_A          126 SCSKQGECLETIGNYTCSCYPGFYGPECEY  155 (162)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             CCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence            46777888854  67999999999999984

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=93.13  E-value=0.043  Score=41.97  Aligned_cols=28  Identities=36%  Similarity=0.923  Sum_probs=24.8

Q ss_pred             CCCCCCEEec---CCCeeecC-CCCccCCCCc
Q psy11501         23 QCRNGAECHP---ATGECSCQ-PGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~---~~~~C~C~-~g~~G~~C~~   50 (133)
                      +|.++|+|.+   ..+.|.|+ +||+|.+|+.
T Consensus         8 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            7999999984   36899999 9999999985

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=92.80  E-value=0.035  Score=34.88  Aligned_cols=28  Identities=32%  Similarity=0.835  Sum_probs=23.4

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|.+.  .++|.|++||.|..|+.
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~  155 (162)
T 1g1s_A          126 SCSKQGECLETIGNYTCSCYPGFYGPECEY  155 (162)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             CCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence            67778888765  67999999999998875

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.66  E-value=0.044  Score=41.61  Aligned_cols=28  Identities=25%  Similarity=0.796  Sum_probs=25.0

Q ss_pred             CCCCCCEEec-C--CCeeecC-CCCccCCCCc
Q psy11501         23 QCRNGAECHP-A--TGECSCQ-PGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~-~--~~~C~C~-~g~~G~~C~~   50 (133)
                      +|.++|+|.+ .  .++|.|+ +||+|.+|+.
T Consensus         9 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence            7999999987 4  5799999 9999999985

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.29  E-value=0.047  Score=41.46  Aligned_cols=32  Identities=34%  Similarity=0.854  Sum_probs=26.7

Q ss_pred             CCCCCCCCCCCeecC-C--CCeeeCC-CCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNP-A--NGQCLCA-PGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~-~--~~~C~C~-~g~~g~~c~~   93 (133)
                      |... +|.++|+|.+ .  .+.|.|+ +||.|.+|+.
T Consensus         5 C~~~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A            5 CCYY-PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             GGGC-CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCCC-CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence            4443 8999999986 4  6899999 9999999985

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=92.15  E-value=0.08  Score=40.49  Aligned_cols=32  Identities=31%  Similarity=0.827  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCeecC---CCCeeeCC-CCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNP---ANGQCLCA-PGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~---~~~~C~C~-~g~~g~~c~~   93 (133)
                      |... +|.++|+|.+   ..+.|.|+ +||.|.+|+.
T Consensus         4 C~s~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            4 CCSN-PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             TTTC-CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCC-CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            5444 8999999984   36899999 9999999986

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=92.06  E-value=0.1  Score=32.59  Aligned_cols=29  Identities=34%  Similarity=0.878  Sum_probs=23.6

Q ss_pred             CCCCCCCeecCC----CC-eeeCCCCcccCCCCC
Q psy11501         65 CRCQNGAICNPA----NG-QCLCAPGWMGSVCNV   93 (133)
Q Consensus        65 ~~C~~~~~C~~~----~~-~C~C~~g~~g~~c~~   93 (133)
                      ++|.++++|...    .+ +|.|+++|.|..|++
T Consensus        13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei   46 (145)
T 2i9a_A           13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   46 (145)
T ss_dssp             CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred             CCCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence            489999999643    33 799999999999975

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=92.01  E-value=0.043  Score=27.84  Aligned_cols=27  Identities=30%  Similarity=0.882  Sum_probs=20.2

Q ss_pred             CCCCCCeec--CC--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICN--PA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~   93 (133)
                      .|.+ |+|.  ..  ...|.|++||+|.+|+.
T Consensus        15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             SCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             cccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence            5777 6774  11  45799999999999984

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=91.92  E-value=0.059  Score=37.41  Aligned_cols=59  Identities=25%  Similarity=0.677  Sum_probs=37.0

Q ss_pred             CCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccC-----CCCCCC---CCCCCCCeeccCCCceeCCCCCcc
Q psy11501         67 CQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWG-----QGCTVP---CECFNGASCHHVTGECQCEPGFKG  131 (133)
Q Consensus        67 C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g-----~~c~~~---c~C~~~g~C~~~~g~C~C~~g~~G  131 (133)
                      |...|.+.  -++|.|.+||.|..|+  |+..-..     ..|..+   -.|.+.|+|  .-|+|.|..++.+
T Consensus       198 C~g~G~~~--CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C--~CG~C~C~~~~~~  264 (280)
T 2p26_A          198 CHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDC--VCGQCLCHTSDVP  264 (280)
T ss_dssp             GGGSEEEE--TTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEE--ETTEEEECCCSST
T ss_pred             cCCCCeEC--CCceeCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceE--eCCeeECcCCCCC
Confidence            44445554  5789999999999996  3321100     034211   147777888  4589999877654

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.66  E-value=0.16  Score=28.31  Aligned_cols=26  Identities=35%  Similarity=1.007  Sum_probs=19.9

Q ss_pred             CCCCCCeecCC----CCeeeCCCCcccCCCC
Q psy11501         66 RCQNGAICNPA----NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        66 ~C~~~~~C~~~----~~~C~C~~g~~g~~c~   92 (133)
                      .|.++ .|...    ...|.|++||.|.+|+
T Consensus        47 yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           47 FCIHG-ECKYVKELRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             CCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred             cCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence            57775 88422    4689999999999987

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=90.16  E-value=0.31  Score=37.88  Aligned_cols=47  Identities=28%  Similarity=0.669  Sum_probs=29.3

Q ss_pred             CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccC
Q psy11501         34 TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGS   89 (133)
Q Consensus        34 ~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~   89 (133)
                      .+.|.|++||.   |..|+ ...+      |....+|.  ..|.+.  .++|.|++||.+.
T Consensus       314 ~~~C~C~~G~~~~~~~~C~-dide------C~~~~~C~--~~C~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          314 GYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCS--QLCVNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             CCCCCCCSSSCCCSSSCCC-CCCC------CSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred             CcEEeCCCCeEcCCCCccc-Cccc------cCCCCccc--cccccCCCCeeeeeecccccC
Confidence            57888888887   55554 2222      43222343  255544  7899999999864

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=89.59  E-value=0.16  Score=38.46  Aligned_cols=64  Identities=25%  Similarity=0.691  Sum_probs=40.2

Q ss_pred             CCCCCEEecCCCeeecCCCCc--cCCCCccCCCCCCCCCCCCC-C-CCCCCCee-cCCCCeeeCCCCccc
Q psy11501         24 CRNGAECHPATGECSCQPGFT--GSLCEERCPPGTHGPSCINR-C-RCQNGAIC-NPANGQCLCAPGWMG   88 (133)
Q Consensus        24 C~~~g~C~~~~~~C~C~~g~~--G~~C~~~C~~g~~g~~C~~~-~-~C~~~~~C-~~~~~~C~C~~g~~g   88 (133)
                      |+..|......|+|.|.+||.  +..|+ .|++||+....... | +|..+..- ....+.|.|..+|.-
T Consensus       252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~-aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~r  320 (536)
T 3fl7_A          252 CAVDGEWLVPIGQCLCQAGYEKVEDACQ-ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFR  320 (536)
T ss_dssp             ECTTSCBCCCBCCCEECTTEEEETTEEE-ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBC
T ss_pred             EcCCCCEecccCcEeccCccccCCceee-ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccc
Confidence            455555554578999999997  66787 89999875543221 1 23332221 122678999888763

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=88.89  E-value=0.15  Score=31.96  Aligned_cols=28  Identities=29%  Similarity=0.800  Sum_probs=22.7

Q ss_pred             CCCCCCEEec--CCCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHP--ATGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~--~~~~C~C~~g~~G~~C~~   50 (133)
                      +|.+++.|..  ..+.|.|.+||.|..|+.
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~  155 (164)
T 3cfw_A          126 SCSGHGECVEIINNYTCNCDVGYYGPQCQF  155 (164)
T ss_dssp             SSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred             cCCCCCeecccCCCceeeeCCCcccccccc
Confidence            4777888874  367899999999999973

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=87.83  E-value=0.54  Score=37.23  Aligned_cols=52  Identities=27%  Similarity=0.662  Sum_probs=33.5

Q ss_pred             EEecC--CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccC
Q psy11501         29 ECHPA--TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGS   89 (133)
Q Consensus        29 ~C~~~--~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~   89 (133)
                      .|.+.  .+.|.|++||.   |..|+ ...+      |.....|.  ..|.+.  .++|.|.+||...
T Consensus       325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~-dide------C~~~~~C~--~~C~n~~gsy~C~C~~Gy~l~  383 (791)
T 3m0c_C          325 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCS--QLCVNLEGGYKCQCEEGFQLD  383 (791)
T ss_dssp             EEEECSBSEEEECCTTCEEETTTEEE-CCCC------CSSSSSCT--TTCCBCSSCBCCCCCSSEECC
T ss_pred             cccCCCCCcccCCCCCCccCCCCccc-cCcc------cCCCCCCC--CeeecCCCCceeecCCCCEeC
Confidence            67643  67899999995   66675 2222      44333343  256544  7899999999753

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=87.09  E-value=0.097  Score=32.54  Aligned_cols=28  Identities=39%  Similarity=1.029  Sum_probs=22.3

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.+++.|.+.  .+.|.|.++|+|+.|+.
T Consensus       126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~  155 (157)
T 1g1t_A          126 SCSGHGECVETINNYTCKCDPGFSGLKCEQ  155 (157)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCEeecCCCCeeEECCCCccCccccc
Confidence            46667888754  57899999999999974

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=86.14  E-value=0.34  Score=36.64  Aligned_cols=63  Identities=32%  Similarity=0.774  Sum_probs=38.6

Q ss_pred             CCCCCeecCCCCeeeCCCCcc--cCCCCCCCCCCccCCCCCC-CC-CCCCCCe-eccCCCceeCCCCCc
Q psy11501         67 CQNGAICNPANGQCLCAPGWM--GSVCNVPCTPGMWGQGCTV-PC-ECFNGAS-CHHVTGECQCEPGFK  130 (133)
Q Consensus        67 C~~~~~C~~~~~~C~C~~g~~--g~~c~~~c~~g~~g~~c~~-~c-~C~~~g~-C~~~~g~C~C~~g~~  130 (133)
                      |...|.+....++|.|.+||.  +..|+ .|++|++...... .| +|..+.. -......|.|..+|.
T Consensus       252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~-aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~  319 (536)
T 3fl7_A          252 CAVDGEWLVPIGQCLCQAGYEKVEDACQ-ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFF  319 (536)
T ss_dssp             ECTTSCBCCCBCCCEECTTEEEETTEEE-ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCB
T ss_pred             EcCCCCEecccCcEeccCccccCCceee-ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEecccc
Confidence            555566655579999999998  55677 6999987554322 22 3332211 111233788877765

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=85.27  E-value=0.47  Score=23.95  Aligned_cols=26  Identities=35%  Similarity=0.884  Sum_probs=19.8

Q ss_pred             CCCCCEEe--cC--CCeeecCCCCccCCCCc
Q psy11501         24 CRNGAECH--PA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        24 C~~~g~C~--~~--~~~C~C~~g~~G~~C~~   50 (133)
                      |.+ |+|.  ..  ...|.|+++|+|..|+.
T Consensus        20 C~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           20 CIH-GECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             CSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence            565 6896  22  35799999999999973

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=83.87  E-value=0.3  Score=30.52  Aligned_cols=28  Identities=29%  Similarity=0.742  Sum_probs=22.9

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.+.+.|...  .+.|.|.+||.|..|+.
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~  155 (164)
T 3cfw_A          126 SCSGHGECVEIINNYTCNCDVGYYGPQCQF  155 (164)
T ss_dssp             SSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred             cCCCCCeecccCCCceeeeCCCcccccccc
Confidence            57778888743  67999999999998874

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=83.73  E-value=0.24  Score=30.71  Aligned_cols=28  Identities=32%  Similarity=0.812  Sum_probs=22.4

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.+.+.|.+.  .+.|.|.++|.|.+|+.
T Consensus       126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~  155 (157)
T 1g1t_A          126 SCSGHGECVETINNYTCKCDPGFSGLKCEQ  155 (157)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCEeecCCCCeeEECCCCccCccccc
Confidence            56777888654  67899999999999874

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=80.22  E-value=1.2  Score=32.09  Aligned_cols=32  Identities=28%  Similarity=0.761  Sum_probs=25.6

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCC-CcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAP-GWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~-g~~g~~c~~   93 (133)
                      |... +|.+++.|.+.  .+.|.|+. +|.|..|+.
T Consensus       188 C~~~-pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          188 CQED-SCSNQGVCLQQWDGFSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             CCTT-SSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred             cccc-cCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence            4443 79999999765  67999996 999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	133
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.15
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.1
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.09
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.09
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.07
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.05
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.05
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.02
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.91
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.84
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.83
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.82
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.76
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.7
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.67
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.66
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.63
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.6
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.59
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.53
d1kloa2	56	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.51
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.41
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.3
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.3
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.29
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	97.26
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.24
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.15
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.13
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.1
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.06
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.02
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	96.97
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	96.76
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	96.7
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.69
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.68
d1kloa2	56	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	96.66
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	96.38
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	96.36
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	95.87
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.75
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	95.74
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	95.27
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	95.1
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	94.61
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	94.41
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	94.18
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.87
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	92.22
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	91.88
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	90.34
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.96
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	88.29
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	86.51
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	85.1
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	81.75

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.2e-06  Score=41.56  Aligned_cols=32  Identities=31%  Similarity=0.828  Sum_probs=27.0

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      |... ||.++++|.+.  .++|.|++||.|.+|++
T Consensus         3 C~~~-PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei   36 (39)
T d1xkba1           3 CETS-PCQNQGKCKDGLGEYTCTCLEGFEGKNCEL   36 (39)
T ss_dssp             TTTC-CCCSSCEECCCSSSCCEECCTTEETTTTCE
T ss_pred             CCCC-CCCCCcEEECCCCCEEEECCCCCCcCcCeE
Confidence            5443 89999999866  78999999999999974

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.3e-06  Score=41.43  Aligned_cols=32  Identities=44%  Similarity=1.057  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      |... ||.++++|.+.  .++|.|++||.|.+|+.
T Consensus         4 C~~~-PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           4 CVSN-PCQNDATCLDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             TTTC-CCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred             CcCC-CCCCCCEEECCCCCEEEeCCCCCccCcCee
Confidence            5444 89999999865  78999999999999974

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.5e-06  Score=41.21  Aligned_cols=28  Identities=36%  Similarity=0.915  Sum_probs=24.9

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++|+|.+.  .+.|.|++||+|.+|++
T Consensus         7 PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei   36 (39)
T d1xkba1           7 PCQNQGKCKDGLGEYTCTCLEGFEGKNCEL   36 (39)
T ss_dssp             CCCSSCEECCCSSSCCEECCTTEETTTTCE
T ss_pred             CCCCCcEEECCCCCEEEECCCCCCcCcCeE
Confidence            78999999865  68999999999999984

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.3e-06  Score=41.50  Aligned_cols=28  Identities=39%  Similarity=0.956  Sum_probs=24.8

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++++|.+.  .++|.|++||+|.+|++
T Consensus         8 PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           8 PCQNDATCLDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             CCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred             CCCCCCEEECCCCCEEEeCCCCCccCcCee
Confidence            78999999865  68999999999999984

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.7e-06  Score=40.05  Aligned_cols=31  Identities=29%  Similarity=0.822  Sum_probs=25.8

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      |... +|.++++|.+.  .++|.|+++|.|.+|+
T Consensus         3 C~~~-PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           3 CASS-PCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             TTTC-CSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCC-CCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            4443 89999999865  7899999999999885

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.6e-06  Score=40.14  Aligned_cols=27  Identities=37%  Similarity=0.978  Sum_probs=24.0

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~   49 (133)
                      +|.++|+|.+.  .++|.|+++|+|.+||
T Consensus         7 PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           7 PCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            78999999865  6899999999999986

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.3e-06  Score=41.56  Aligned_cols=27  Identities=44%  Similarity=0.992  Sum_probs=24.2

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~   49 (133)
                      +|.++++|.+.  .++|.|++||+|++|+
T Consensus        10 PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_          10 PCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            79999999864  6799999999999997

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.6e-06  Score=41.18  Aligned_cols=32  Identities=31%  Similarity=0.855  Sum_probs=26.6

Q ss_pred             CCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         60 SCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        60 ~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      .|... +|.++++|.+.  .++|.|++||+|++|+
T Consensus         5 ~C~~~-PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           5 QCESN-PCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             TTTTC-CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             cCCCC-CCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            35544 89999999755  6899999999999987

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.91  E-value=1.8e-06  Score=40.46  Aligned_cols=27  Identities=41%  Similarity=1.011  Sum_probs=23.8

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~   49 (133)
                      +|.++++|.+.  .++|.|++||+|.+|+
T Consensus         9 PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           9 PCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             CCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            78999999864  6799999999999986

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.84  E-value=2.1e-06  Score=40.28  Aligned_cols=27  Identities=37%  Similarity=0.973  Sum_probs=23.9

Q ss_pred             CCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         66 RCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      ||.++++|.+.  .++|.|++||+|.+|+
T Consensus         9 PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           9 PCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             CCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            89999999765  6899999999999885

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.8e-06  Score=40.12  Aligned_cols=28  Identities=36%  Similarity=0.914  Sum_probs=24.5

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++++|.+.  +|+|.|++||+|.+|++
T Consensus        12 pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1          12 PCEHAGKCINTLGSFECQCLQGYTGPRCEI   41 (42)
T ss_dssp             SSSTTCEEEECSSSEEEECCTTEESTTSCE
T ss_pred             CCCCCcEeECCCCCEEeECCCCCcCCCCcC
Confidence            68899999865  67999999999999973

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=6.2e-06  Score=39.50  Aligned_cols=29  Identities=38%  Similarity=0.949  Sum_probs=24.7

Q ss_pred             CCCCCCCeecCC----CCeeeCCCCcccCCCCC
Q psy11501         65 CRCQNGAICNPA----NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        65 ~~C~~~~~C~~~----~~~C~C~~g~~g~~c~~   93 (133)
                      .||.++++|.+.    .++|.|++||.|.+|+.
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~   36 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI   36 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred             CCCCCCCEEecCCCCCCeEECCCCCCCCCCcCc
Confidence            389999999742    67999999999999985

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=8.8e-06  Score=38.94  Aligned_cols=29  Identities=41%  Similarity=0.940  Sum_probs=24.5

Q ss_pred             CCCCCCEEecC----CCeeecCCCCccCCCCcc
Q psy11501         23 QCRNGAECHPA----TGECSCQPGFTGSLCEER   51 (133)
Q Consensus        23 ~C~~~g~C~~~----~~~C~C~~g~~G~~C~~~   51 (133)
                      +|.++|+|.+.    .+.|.|++||+|.+|+..
T Consensus         5 PC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~   37 (41)
T d1tpga1           5 RCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID   37 (41)
T ss_dssp             CSCTTCEEEEESSSSCEEEECCTTCBSSSCCBC
T ss_pred             CCCCCCEEecCCCCCCeEECCCCCCCCCCcCcC
Confidence            68899999842    578999999999999853

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=4.9e-06  Score=39.63  Aligned_cols=32  Identities=31%  Similarity=0.836  Sum_probs=26.3

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      |... +|.++++|.+.  .++|.|++||.|.+|+.
T Consensus         4 C~~~-pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           4 CQDM-SCSKQGECLETIGNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             CCTT-GGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             ccCC-cCCCCcEEECCCCCeEEeCCCCccCCCCCC
Confidence            4433 89999999765  78999999999999974

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=3.2e-06  Score=40.09  Aligned_cols=32  Identities=34%  Similarity=0.861  Sum_probs=26.1

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      |... +|.++++|.+.  .++|.|++||.|.+|+.
T Consensus         4 C~~~-pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           4 CTNT-SCSGHGECVETINNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             CCTT-GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             ccCC-cCCCCcEEECCCCCEEEeCCCCCcCcCcCc
Confidence            4443 89999999755  67999999999999974

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=4.2e-06  Score=39.88  Aligned_cols=28  Identities=43%  Similarity=0.962  Sum_probs=24.5

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++|+|.+.  .++|.|+++|+|++|+.
T Consensus         8 pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           8 SCSKQGECLETIGNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             cCCCCcEEECCCCCeEEeCCCCccCCCCCC
Confidence            68889999864  68999999999999984

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.4e-05  Score=38.46  Aligned_cols=28  Identities=25%  Similarity=0.761  Sum_probs=24.7

Q ss_pred             CCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501         65 CRCQNGAICNPA--NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        65 ~~C~~~~~C~~~--~~~C~C~~g~~g~~c~   92 (133)
                      .+|.++++|.+.  .++|.|++||.|.+|+
T Consensus        11 ~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1          11 NPCEHAGKCINTLGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTTSC
T ss_pred             CCCCCCcEeECCCCCEEeECCCCCcCCCCc
Confidence            379999999876  7899999999999887

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3.2e-06  Score=40.09  Aligned_cols=28  Identities=39%  Similarity=1.029  Sum_probs=24.3

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++|+|.+.  .+.|.|++||+|++|++
T Consensus         8 pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           8 SCSGHGECVETINNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred             cCCCCcEEECCCCCEEEeCCCCCcCcCcCc
Confidence            68899999854  67899999999999984

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=8e-06  Score=41.02  Aligned_cols=32  Identities=38%  Similarity=0.978  Sum_probs=27.9

Q ss_pred             CEEecCCCeeecCCCCccCCCCccCCCCCCCCC
Q psy11501         28 AECHPATGECSCQPGFTGSLCEERCPPGTHGPS   60 (133)
Q Consensus        28 g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~   60 (133)
                      ..|+..+++|.|.++++|..|+ +|.++||+..
T Consensus        13 ~~Cd~~tGqC~Ck~~v~G~~Cd-~C~~g~~~~~   44 (51)
T d1kloa3          13 SSCNPVTGQCQCLPHVSGRDCG-TCDPGYYNLQ   44 (51)
T ss_dssp             CCCCTTTCCCCBCTTEESTTCC-EECTTCBCGG
T ss_pred             CccCCCCCeecCCCCCcCCCcc-cccccccCCC
Confidence            3577778999999999999998 8999999853

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=3e-05  Score=38.21  Aligned_cols=28  Identities=25%  Similarity=0.871  Sum_probs=23.4

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCCCCcc
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSLCEER   51 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~   51 (133)
                      +|.+ |+|.+.  .|.|.|++||+|.+|+..
T Consensus        15 PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce~~   44 (48)
T d1autl1          15 CCGH-GTCIDGIGSFSCDCRSGWEGRFCQRE   44 (48)
T ss_dssp             TTTS-EEECCCSSCCCEEECTTEESTTSCEE
T ss_pred             CCCC-CEEECCCCCCeEeCCCCCcCCCcccc
Confidence            6776 899864  789999999999999853

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=1.2e-05  Score=41.22  Aligned_cols=32  Identities=38%  Similarity=0.863  Sum_probs=27.9

Q ss_pred             CEEecCCCeee-cCCCCccCCCCccCCCCCCCCC
Q psy11501         28 AECHPATGECS-CQPGFTGSLCEERCPPGTHGPS   60 (133)
Q Consensus        28 g~C~~~~~~C~-C~~g~~G~~C~~~C~~g~~g~~   60 (133)
                      ..|++.+++|. |.++++|.+|+ .|.++|||..
T Consensus        13 ~~Cd~~tG~C~~C~~nt~G~~Cd-~C~~G~yg~~   45 (56)
T d1kloa2          13 GNCNRLTGECLKCIYNTAGFYCD-RCKEGFFGNP   45 (56)
T ss_dssp             CCBCTTTCCBCCBCTTEETTTTC-EECTTEEECT
T ss_pred             CccCCCCCCCCCCCCCCCCCCcC-cccCCcccCC
Confidence            46887899995 99999999998 8999999853

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=6.1e-05  Score=37.09  Aligned_cols=31  Identities=29%  Similarity=0.833  Sum_probs=25.0

Q ss_pred             CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~   93 (133)
                      |... +|.+ |+|.+.  .++|.|++||.|.+|+.
T Consensus        11 C~~~-PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce~   43 (48)
T d1autl1          11 CASL-CCGH-GTCIDGIGSFSCDCRSGWEGRFCQR   43 (48)
T ss_dssp             SSST-TTTS-EEECCCSSCCCEEECTTEESTTSCE
T ss_pred             ccCC-CCCC-CEEECCCCCCeEeCCCCCcCCCccc
Confidence            4443 7887 789765  78999999999999984

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=6.8e-05  Score=35.68  Aligned_cols=32  Identities=31%  Similarity=0.836  Sum_probs=25.1

Q ss_pred             CCCCCCCCCCCeecCC---CCeeeCC-CCcccCCCCC
Q psy11501         61 CINRCRCQNGAICNPA---NGQCLCA-PGWMGSVCNV   93 (133)
Q Consensus        61 C~~~~~C~~~~~C~~~---~~~C~C~-~g~~g~~c~~   93 (133)
                      |... +|.++++|.+.   .++|.|+ ++|.|.+|+.
T Consensus         4 C~~~-PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           4 CCSN-PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             TTTC-CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CcCC-CCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            5443 89999999642   5799996 6999999873

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=5.5e-05  Score=36.02  Aligned_cols=28  Identities=36%  Similarity=0.923  Sum_probs=23.3

Q ss_pred             CCCCCCEEec---CCCeeecC-CCCccCCCCc
Q psy11501         23 QCRNGAECHP---ATGECSCQ-PGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~---~~~~C~C~-~g~~G~~C~~   50 (133)
                      +|.++|+|.+   ..++|.|+ ++|+|.+|++
T Consensus         8 PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            7999999974   25789996 6999999973

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=4.6e-05  Score=38.73  Aligned_cols=39  Identities=33%  Similarity=0.830  Sum_probs=29.6

Q ss_pred             CCCCCCCEEec----CCCee-ecCCCCccCCCCccCCCCCCCCCC
Q psy11501         22 CQCRNGAECHP----ATGEC-SCQPGFTGSLCEERCPPGTHGPSC   61 (133)
Q Consensus        22 C~C~~~g~C~~----~~~~C-~C~~g~~G~~C~~~C~~g~~g~~C   61 (133)
                      |+|.++++|..    ..+.| .|.++|+|.+|+ .|.++|+|...
T Consensus         1 CpC~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce-~C~~g~yg~P~   44 (55)
T d1kloa1           1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE-LCDDGYFGDPL   44 (55)
T ss_dssp             CCSCTTCCEEECSSSCCEEECSCCTTEESTTSC-EECTTEEEETT
T ss_pred             CcCcCCCccceeCCCCCEEcCCCCCCCccCccc-ccCCccccCcc
Confidence            45667776642    24567 599999999998 89999998644

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=6.3e-05  Score=37.57  Aligned_cols=32  Identities=41%  Similarity=1.014  Sum_probs=27.4

Q ss_pred             CeecCCCCeeeCCCCcccCCCCCCCCCCccCCC
Q psy11501         71 AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQG  103 (133)
Q Consensus        71 ~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~  103 (133)
                      ..|+..+++|.|.+++.|.+|+ +|.++|++..
T Consensus        13 ~~Cd~~tGqC~Ck~~v~G~~Cd-~C~~g~~~~~   44 (51)
T d1kloa3          13 SSCNPVTGQCQCLPHVSGRDCG-TCDPGYYNLQ   44 (51)
T ss_dssp             CCCCTTTCCCCBCTTEESTTCC-EECTTCBCGG
T ss_pred             CccCCCCCeecCCCCCcCCCcc-cccccccCCC
Confidence            3466668999999999999999 7999999753

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.24  E-value=4.7e-05  Score=36.45  Aligned_cols=28  Identities=25%  Similarity=0.751  Sum_probs=23.3

Q ss_pred             CCCCCCEEecC---CCeeecCC-CCccCCCCc
Q psy11501         23 QCRNGAECHPA---TGECSCQP-GFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~---~~~C~C~~-g~~G~~C~~   50 (133)
                      +|.++|+|.+.   .++|.|++ ||+|.+|++
T Consensus         9 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            79999999742   57899986 899999973

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.15  E-value=5.1e-05  Score=36.34  Aligned_cols=28  Identities=36%  Similarity=0.845  Sum_probs=23.3

Q ss_pred             CCCCCCeecCC---CCeeeCCC-CcccCCCCC
Q psy11501         66 RCQNGAICNPA---NGQCLCAP-GWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~---~~~C~C~~-g~~g~~c~~   93 (133)
                      +|.++++|.+.   .++|.|++ ||.|.+|+.
T Consensus         9 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            89999999642   57999986 899999873

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.0003  Score=35.29  Aligned_cols=28  Identities=32%  Similarity=0.862  Sum_probs=24.0

Q ss_pred             CCCCCCeecC--C--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNP--A--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~--~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++++|..  .  .++|.|+++|.|.+|+.
T Consensus        13 ~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_          13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            7999999963  2  67999999999999985

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00025  Score=36.90  Aligned_cols=32  Identities=50%  Similarity=1.041  Sum_probs=25.5

Q ss_pred             CCCCCCEEec-------CCCeeecCCCCccCCCCccCCC
Q psy11501         23 QCRNGAECHP-------ATGECSCQPGFTGSLCEERCPP   54 (133)
Q Consensus        23 ~C~~~g~C~~-------~~~~C~C~~g~~G~~C~~~C~~   54 (133)
                      +|.++|+|..       ..+.|.|++||+|.+|+.....
T Consensus        13 ~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~~~   51 (63)
T d1haea_          13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM   51 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCS
T ss_pred             cCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCCCc
Confidence            6899999952       2568999999999999965444

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.0003  Score=35.26  Aligned_cols=28  Identities=32%  Similarity=0.878  Sum_probs=23.7

Q ss_pred             CCCCCCEEec----CCCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHP----ATGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~----~~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++|+|..    ..++|.|+++|+|.+|+.
T Consensus        13 ~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_          13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            6889999963    257999999999999984

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=8e-05  Score=36.69  Aligned_cols=28  Identities=29%  Similarity=0.781  Sum_probs=23.5

Q ss_pred             CCCCCCeecC--C--CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNP--A--NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~--~--~~~C~C~~g~~g~~c~~   93 (133)
                      +|.++|+|..  .  .+.|.|+++|+|.+|+.
T Consensus        11 ~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_          11 YCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            6889999953  2  57999999999999984

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00029  Score=32.05  Aligned_cols=26  Identities=38%  Similarity=1.011  Sum_probs=20.9

Q ss_pred             CCCCCCCeeccCC-----CceeCCCCCccCC
Q psy11501        108 CECFNGASCHHVT-----GECQCEPGFKGQK  133 (133)
Q Consensus       108 c~C~~~g~C~~~~-----g~C~C~~g~~G~~  133 (133)
                      |.|.|+|+|+...     .+|.||.+|.|.+
T Consensus         2 C~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~H   32 (40)
T d2i9aa1           2 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQH   32 (40)
T ss_dssp             CCCCTTCEEEECSSSTTCEEEECCTTEESTT
T ss_pred             CccccCCEEEEEehhcCCEEecCCcccCcee
Confidence            4789999997642     2899999999864

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00084  Score=30.48  Aligned_cols=29  Identities=38%  Similarity=0.930  Sum_probs=24.1

Q ss_pred             CCCCCCCEEecC-----CCeeecCCCCccCCCCc
Q psy11501         22 CQCRNGAECHPA-----TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        22 C~C~~~g~C~~~-----~~~C~C~~g~~G~~C~~   50 (133)
                      |.|.++|.|...     .-.|.|+.+|.|..|++
T Consensus         2 C~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEi   35 (40)
T d2i9aa1           2 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI   35 (40)
T ss_dssp             CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred             CccccCCEEEEEehhcCCEEecCCcccCceeEEe
Confidence            678999999853     33799999999999985

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00021  Score=33.77  Aligned_cols=25  Identities=40%  Similarity=1.036  Sum_probs=20.7

Q ss_pred             CCCCCCEEecCCCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~   49 (133)
                      .++.+|.|.  .++|.|.++|+|+.|+
T Consensus        16 ~g~~hG~C~--~G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          16 GGPGRGLCF--CGKCRCHPGFEGSACQ   40 (41)
T ss_dssp             SHHHHEEEE--TTEEEECTTCCTTTTC
T ss_pred             CCCCCCeEE--CCEEEcCCCCcccCcc
Confidence            344578897  6799999999999986

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00016  Score=35.56  Aligned_cols=28  Identities=29%  Similarity=0.713  Sum_probs=23.2

Q ss_pred             CCCCCCEEec--C--CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHP--A--TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~--~--~~~C~C~~g~~G~~C~~   50 (133)
                      +|.++|+|..  .  .+.|.|+++|+|.+|+.
T Consensus        11 ~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_          11 YCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            5888999963  2  46899999999999984

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00079  Score=34.90  Aligned_cols=29  Identities=34%  Similarity=0.784  Sum_probs=24.1

Q ss_pred             CCCCCCeecC-----C--CCeeeCCCCcccCCCCCC
Q psy11501         66 RCQNGAICNP-----A--NGQCLCAPGWMGSVCNVP   94 (133)
Q Consensus        66 ~C~~~~~C~~-----~--~~~C~C~~g~~g~~c~~~   94 (133)
                      +|.++|+|..     .  .+.|.|++||.|.+|+..
T Consensus        13 ~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~   48 (63)
T d1haea_          13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTEN   48 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEE
T ss_pred             cCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCC
Confidence            7999999942     2  578999999999999864

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=0.0006  Score=34.50  Aligned_cols=32  Identities=34%  Similarity=0.865  Sum_probs=27.4

Q ss_pred             CeecCCCCeee-CCCCcccCCCCCCCCCCccCCC
Q psy11501         71 AICNPANGQCL-CAPGWMGSVCNVPCTPGMWGQG  103 (133)
Q Consensus        71 ~~C~~~~~~C~-C~~g~~g~~c~~~c~~g~~g~~  103 (133)
                      ..|+..+++|. |.++..|.+|+ +|.+||+|..
T Consensus        13 ~~Cd~~tG~C~~C~~nt~G~~Cd-~C~~G~yg~~   45 (56)
T d1kloa2          13 GNCNRLTGECLKCIYNTAGFYCD-RCKEGFFGNP   45 (56)
T ss_dssp             CCBCTTTCCBCCBCTTEETTTTC-EECTTEEECT
T ss_pred             CccCCCCCCCCCCCCCCCCCCcC-cccCCcccCC
Confidence            45777789995 99999999999 8999999853

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.38  E-value=0.00081  Score=33.88  Aligned_cols=27  Identities=30%  Similarity=0.741  Sum_probs=22.9

Q ss_pred             CCee-eCCCCcccCCCCCCCCCCccCCCC
Q psy11501         77 NGQC-LCAPGWMGSVCNVPCTPGMWGQGC  104 (133)
Q Consensus        77 ~~~C-~C~~g~~g~~c~~~c~~g~~g~~c  104 (133)
                      .++| .|.++|+|.+|+ .|.++|++...
T Consensus        17 ~~vC~~C~~~~~G~~Ce-~C~~g~yg~P~   44 (55)
T d1kloa1          17 EVVCTHCPTGTAGKRCE-LCDDGYFGDPL   44 (55)
T ss_dssp             CEEECSCCTTEESTTSC-EECTTEEEETT
T ss_pred             CEEcCCCCCCCccCccc-ccCCccccCcc
Confidence            4567 599999999999 79999997654

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.00053  Score=29.70  Aligned_cols=25  Identities=32%  Similarity=1.027  Sum_probs=20.2

Q ss_pred             CCCCCCEEecCCCeeecCCCCccCCCC
Q psy11501         23 QCRNGAECHPATGECSCQPGFTGSLCE   49 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~   49 (133)
                      .|+++|.|+  -+.|.|.++|+|.+|.
T Consensus         4 ~C~ghG~C~--CG~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCS--CGDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCC--STTTCCCTTEESSSSC
T ss_pred             eccCCCccc--CCceEccCCccccccc
Confidence            356777776  6789999999999884

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.87  E-value=0.0011  Score=31.06  Aligned_cols=24  Identities=25%  Similarity=0.737  Sum_probs=20.2

Q ss_pred             CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501        109 ECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus       109 ~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|...++|++..+  +|.|++||+|+
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYTGN   33 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred             CCCCCCEeecCCCCeEeECCCCCcCC
Confidence            5677889998765  89999999985

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.002  Score=31.69  Aligned_cols=28  Identities=25%  Similarity=0.701  Sum_probs=22.5

Q ss_pred             CCCCCCeecCC---CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA---NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~---~~~C~C~~g~~g~~c~~   93 (133)
                      .|.+++.|...   ...|.|+++|.|.+|+.
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            58888888532   56899999999999974

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.0032  Score=29.77  Aligned_cols=29  Identities=41%  Similarity=1.164  Sum_probs=23.1

Q ss_pred             CCCCCCEEecCCCeeecC-CCCccCCCCccCCC
Q psy11501         23 QCRNGAECHPATGECSCQ-PGFTGSLCEERCPP   54 (133)
Q Consensus        23 ~C~~~g~C~~~~~~C~C~-~g~~G~~C~~~C~~   54 (133)
                      .|+.+|.|.  -++|+|. ++|.|..|+ .|+.
T Consensus        12 iCng~G~C~--cG~C~C~~~gy~G~~Ce-~Cpt   41 (43)
T d1jv2b5          12 LCSGRGKCE--CGSCVCIQPGSYGDTCE-KCPT   41 (43)
T ss_dssp             GGGGTEEEE--TTEEEECCSSCBSTTSC-BCTT
T ss_pred             EECCCCEEE--CCEeEeCCCCccCCccc-cCCC
Confidence            477788887  6799995 799999998 5653

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0037  Score=30.68  Aligned_cols=28  Identities=32%  Similarity=0.748  Sum_probs=22.0

Q ss_pred             CCCCCCEEecC---CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA---TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~---~~~C~C~~g~~G~~C~~   50 (133)
                      .|.+++.|...   ...|.|+.+|+|..|+.
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            47788888532   45899999999999984

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0023  Score=31.29  Aligned_cols=28  Identities=25%  Similarity=0.682  Sum_probs=21.9

Q ss_pred             CCCCCCeecCC---CCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICNPA---NGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~~~---~~~C~C~~g~~g~~c~~   93 (133)
                      .|.+++.|...   ...|.|++||.|.+|+.
T Consensus        14 yClnGgcc~~~~~~~~~C~C~~gy~G~RCe~   44 (49)
T d1moxc_          14 FCFHGTCRFLVQEDKPACVCHSGYVGARCEH   44 (49)
T ss_dssp             SSTTEEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             EeeCCeEEecCCCCCcEeECCCCCEecCCcc
Confidence            57887777422   56899999999999974

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.0043  Score=30.28  Aligned_cols=28  Identities=29%  Similarity=0.731  Sum_probs=21.2

Q ss_pred             CCCCCCEEecC---CCeeecCCCCccCCCCc
Q psy11501         23 QCRNGAECHPA---TGECSCQPGFTGSLCEE   50 (133)
Q Consensus        23 ~C~~~g~C~~~---~~~C~C~~g~~G~~C~~   50 (133)
                      -|.+++.|...   ...|.|+.+|+|.+|+.
T Consensus        14 yClnGgcc~~~~~~~~~C~C~~gy~G~RCe~   44 (49)
T d1moxc_          14 FCFHGTCRFLVQEDKPACVCHSGYVGARCEH   44 (49)
T ss_dssp             SSTTEEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             EeeCCeEEecCCCCCcEeECCCCCEecCCcc
Confidence            36777777422   46899999999999983

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.01  Score=28.44  Aligned_cols=27  Identities=26%  Similarity=0.721  Sum_probs=20.4

Q ss_pred             CCCCCCeec--C--CCCeeeCCCCcccCCCCC
Q psy11501         66 RCQNGAICN--P--ANGQCLCAPGWMGSVCNV   93 (133)
Q Consensus        66 ~C~~~~~C~--~--~~~~C~C~~g~~g~~c~~   93 (133)
                      .|.+ |.|.  .  ..+.|.|++||.|.+|+.
T Consensus        13 yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             SCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             cCcC-CEEEEeCCCCccEeECCCCceecCcee
Confidence            6777 5563  1  257899999999999974

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.18  E-value=0.0083  Score=27.92  Aligned_cols=25  Identities=36%  Similarity=0.654  Sum_probs=19.2

Q ss_pred             CCCCCCEEecC--CCeeecCCCCccCC
Q psy11501         23 QCRNGAECHPA--TGECSCQPGFTGSL   47 (133)
Q Consensus        23 ~C~~~g~C~~~--~~~C~C~~g~~G~~   47 (133)
                      .|..++.|.+.  ++.|.|.+||.|+-
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYTGNG   34 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred             CCCCCCEeecCCCCeEeECCCCCcCCC
Confidence            35667888754  67999999998753

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.87  E-value=0.036  Score=26.01  Aligned_cols=19  Identities=26%  Similarity=0.744  Sum_probs=15.3

Q ss_pred             CCeeccCCC--ceeCCCCCcc
Q psy11501        113 GASCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus       113 ~g~C~~~~g--~C~C~~g~~G  131 (133)
                      .++|+++.|  +|.|++||++
T Consensus        16 ~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1          16 HGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             SSCCCCCSSCCCCCCCTTEEE
T ss_pred             CCEeECCCCCeEeECCCCccc
Confidence            567888755  8999999975

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.22  E-value=0.035  Score=25.81  Aligned_cols=26  Identities=31%  Similarity=0.929  Sum_probs=19.5

Q ss_pred             CCCCCCeecCC----CCeeeCCCCcccCCCC
Q psy11501         66 RCQNGAICNPA----NGQCLCAPGWMGSVCN   92 (133)
Q Consensus        66 ~C~~~~~C~~~----~~~C~C~~g~~g~~c~   92 (133)
                      .|.+ |.|.-.    ...|.|..||.|.+|+
T Consensus         9 yCih-G~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           9 FCIH-GECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             CCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             EeEC-cEEeecCcCCCceeECCCCCeecCcc
Confidence            4665 777422    5689999999999887

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.88  E-value=0.049  Score=25.68  Aligned_cols=23  Identities=30%  Similarity=0.915  Sum_probs=17.9

Q ss_pred             CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501        109 ECFNGASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus       109 ~C~~~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .|. .++|.|+.|  +|.|++||.+.
T Consensus        12 ~C~-~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1          12 LCG-RGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             TTT-TSCEEEETTEEEECCCSSEEEC
T ss_pred             CCC-CCEeEcCCCCeEEeCCCCCccC
Confidence            343 478998766  89999999874

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.34  E-value=0.057  Score=25.12  Aligned_cols=19  Identities=42%  Similarity=1.176  Sum_probs=16.1

Q ss_pred             CCeeccCCC--ceeCCCCCcc
Q psy11501        113 GASCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus       113 ~g~C~~~~g--~C~C~~g~~G  131 (133)
                      .++|+|+.|  +|.|++||+.
T Consensus        14 ~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          14 GGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             TSEEEEETTEEEEESCTTSCC
T ss_pred             CCEeECCCCCeEEeCCCCCeE
Confidence            579998766  8999999974

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.96  E-value=0.11  Score=24.24  Aligned_cols=20  Identities=30%  Similarity=0.896  Sum_probs=16.1

Q ss_pred             CCeeccCCC--ceeCCCCCccC
Q psy11501        113 GASCHHVTG--ECQCEPGFKGQ  132 (133)
Q Consensus       113 ~g~C~~~~g--~C~C~~g~~G~  132 (133)
                      .++|+++.|  +|.|++||...
T Consensus        15 ~~~C~Nt~Gsy~C~C~~Gy~l~   36 (43)
T d1uzka2          15 GGKCINTFGSFQCRCPTGYYLN   36 (43)
T ss_dssp             TSEEEECSSCEEEECCTTCCBC
T ss_pred             CCEEECCCCCeEeECCCCCeEC
Confidence            368998866  89999999753

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.29  E-value=0.1  Score=24.28  Aligned_cols=19  Identities=32%  Similarity=0.901  Sum_probs=15.6

Q ss_pred             CCeeccCCC--ceeCCCCCcc
Q psy11501        113 GASCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus       113 ~g~C~~~~g--~C~C~~g~~G  131 (133)
                      .++|+++.|  +|.|++||..
T Consensus        14 ~~~C~Nt~G~y~C~C~~Gy~l   34 (43)
T d1uzka1          14 SGNCVNTPGSYICDCPPDFEL   34 (43)
T ss_dssp             TSEEEEETTEEEEECCTTCEE
T ss_pred             CCEeECCCCCEEEecCCCCEE
Confidence            468988766  8999999964

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.51  E-value=0.15  Score=23.39  Aligned_cols=18  Identities=39%  Similarity=0.938  Sum_probs=14.8

Q ss_pred             CeeccCCC--ceeCCCCCcc
Q psy11501        114 ASCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus       114 g~C~~~~g--~C~C~~g~~G  131 (133)
                      .+|+++.|  +|.|++||+.
T Consensus        13 ~~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3          13 GVCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             SEEEECSSSEEEEECSSSSC
T ss_pred             CEeeCCCCCeEeECCCCCee
Confidence            47888755  8999999986

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.10  E-value=0.46  Score=21.65  Aligned_cols=17  Identities=24%  Similarity=0.659  Sum_probs=13.2

Q ss_pred             eecCC--CCeeeCCCCccc
Q psy11501         72 ICNPA--NGQCLCAPGWMG   88 (133)
Q Consensus        72 ~C~~~--~~~C~C~~g~~g   88 (133)
                      .|.++  +++|.|++||.-
T Consensus        13 ~C~n~~Gsy~C~C~~Gy~L   31 (41)
T d1i0ua2          13 LCVNLEGGYKCQCEEGFQL   31 (41)
T ss_dssp             CEECSSSCCEECCCTTEEE
T ss_pred             EeECCCCCEEeECCCCCeE
Confidence            56554  789999999973

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.75  E-value=0.37  Score=23.27  Aligned_cols=19  Identities=37%  Similarity=0.983  Sum_probs=15.2

Q ss_pred             CCeeccCCC--ceeCCCCCcc
Q psy11501        113 GASCHHVTG--ECQCEPGFKG  131 (133)
Q Consensus       113 ~g~C~~~~g--~C~C~~g~~G  131 (133)
                      ..+|+|+.|  +|.|++||+.
T Consensus        23 ~~~C~Nt~GsY~C~C~~Gy~l   43 (53)
T d1apqa_          23 QHLCHNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             SSEEEEETTEEEEECSTTCEE
T ss_pred             cCEeEcCCCCeEeECCCCCeE
Confidence            347888766  8999999974