Psyllid ID: psy11533


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFVSGSGGDGGPRSSTEVRFMSESGE
cEEEEcccccccccccccccccccEEEEEEcccccEEEEEccccccEEEEEccccccccccccEEEEEEccccccccccccccEEEEEcccc
cEEEEEcEEEEEEccccccEEcccHEEEEcccccEEEEEEEccccEEEEEccccccccccHHHHEEcccccccccccccccccEEEEEcccc
myrlynldvfeyeldspmslyaaipfvtahnshhsVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFvsgsggdggprssTEVRFMSESGE
MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSkstltgdvMSKIVNfvsgsggdggprsstevrfmsesge
MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFVsgsggdggprssTEVRFMSESGE
**RLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFV***********************
MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKST****VM*****************SSTEVRFMSESG*
MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFVSG*********************
MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMS*****************ST**********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFVSGSGGDGGPRSSTEVRFMSESGE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query92 2.2.26 [Sep-21-2011]
Q14697 944 Neutral alpha-glucosidase yes N/A 0.913 0.088 0.511 1e-20
Q4R4N7 944 Neutral alpha-glucosidase N/A N/A 0.913 0.088 0.511 1e-20
Q8BHN3 944 Neutral alpha-glucosidase yes N/A 0.913 0.088 0.5 2e-20
P79403 944 Neutral alpha-glucosidase yes N/A 0.913 0.088 0.511 3e-20
Q9US55 923 Glucosidase 2 subunit alp yes N/A 0.554 0.055 0.647 2e-14
Q94502 943 Neutral alpha-glucosidase yes N/A 0.75 0.073 0.5 2e-14
Q8BVW0 898 Neutral alpha-glucosidase no N/A 0.913 0.093 0.366 1e-11
Q8TET4 914 Neutral alpha-glucosidase no N/A 0.913 0.091 0.366 5e-11
Q9BE70 769 Neutral alpha-glucosidase N/A N/A 0.913 0.109 0.366 5e-11
P38138 954 Glucosidase 2 subunit alp yes N/A 0.586 0.056 0.45 8e-08
>sp|Q14697|GANAB_HUMAN Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3 Back     alignment and function desciption
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 65/90 (72%), Gaps = 6/90 (6%)

Query: 2   YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDV 61
           YRLYNLDVF+YEL +PM+LY ++P + AHN H  +G+FWLNAAETWVD+  S +T    +
Sbjct: 277 YRLYNLDVFQYELYNPMALYGSVPVLLAHNPHRDLGIFWLNAAETWVDI--SSNTAGKTL 334

Query: 62  MSKIVNFVSGSGGDGGPRSSTEVRFMSESG 91
             K+++++ GSG        T+VR+MSE+G
Sbjct: 335 FGKMMDYLQGSGET----PQTDVRWMSETG 360




Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 8EC: 4
>sp|Q4R4N7|GANAB_MACFA Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1 Back     alignment and function description
>sp|Q8BHN3|GANAB_MOUSE Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1 Back     alignment and function description
>sp|P79403|GANAB_PIG Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1 Back     alignment and function description
>sp|Q9US55|GLU2A_SCHPO Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gls2 PE=3 SV=1 Back     alignment and function description
>sp|Q94502|GANAB_DICDI Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1 Back     alignment and function description
>sp|Q8BVW0|GANC_MOUSE Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2 Back     alignment and function description
>sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=3 Back     alignment and function description
>sp|Q9BE70|GANC_MACFA Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2 Back     alignment and function description
>sp|P38138|GLU2A_YEAST Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ROT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query92
189235376 907 PREDICTED: similar to CG14476 CG14476-PB 0.902 0.091 0.577 4e-20
348564352 966 PREDICTED: neutral alpha-glucosidase AB- 0.913 0.086 0.522 9e-20
395544410 1737 PREDICTED: neutral alpha-glucosidase AB 0.913 0.048 0.522 2e-19
444711078 1248 Neutral alpha-glucosidase AB, partial [T 0.913 0.067 0.522 2e-19
291409544 944 PREDICTED: neutral alpha-glucosidase AB 0.913 0.088 0.522 2e-19
351699170 918 Neutral alpha-glucosidase AB [Heteroceph 0.913 0.091 0.511 2e-19
291409546 966 PREDICTED: neutral alpha-glucosidase AB 0.913 0.086 0.522 3e-19
327291302 457 PREDICTED: neutral alpha-glucosidase AB- 0.913 0.183 0.5 3e-19
47225253 928 unnamed protein product [Tetraodon nigro 0.913 0.090 0.511 4e-19
395852478 830 PREDICTED: neutral alpha-glucosidase AB 0.913 0.101 0.522 4e-19
>gi|189235376|ref|XP_968738.2| PREDICTED: similar to CG14476 CG14476-PB [Tribolium castaneum] gi|270003604|gb|EFA00052.1| hypothetical protein TcasGA2_TC002860 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 2   YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDV 61
           YRLYNLDVFEYE+DS M++Y A+P V AH+  ++VGVFW NAAETWVD++ SK T   +V
Sbjct: 242 YRLYNLDVFEYEVDSTMAIYGAVPVVYAHSDKNTVGVFWHNAAETWVDISNSKDT---NV 298

Query: 62  MSKIVNFVSGSGGDGGPRSSTEVRFMSESG 91
           +S IVN VSG      P ++ +  FMSESG
Sbjct: 299 VSSIVNLVSGH----QPDNAVDAHFMSESG 324




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348564352|ref|XP_003467969.1| PREDICTED: neutral alpha-glucosidase AB-like [Cavia porcellus] Back     alignment and taxonomy information
>gi|395544410|ref|XP_003774103.1| PREDICTED: neutral alpha-glucosidase AB [Sarcophilus harrisii] Back     alignment and taxonomy information
>gi|444711078|gb|ELW52032.1| Neutral alpha-glucosidase AB, partial [Tupaia chinensis] Back     alignment and taxonomy information
>gi|291409544|ref|XP_002721052.1| PREDICTED: neutral alpha-glucosidase AB isoform 1 [Oryctolagus cuniculus] Back     alignment and taxonomy information
>gi|351699170|gb|EHB02089.1| Neutral alpha-glucosidase AB [Heterocephalus glaber] Back     alignment and taxonomy information
>gi|291409546|ref|XP_002721053.1| PREDICTED: neutral alpha-glucosidase AB isoform 2 [Oryctolagus cuniculus] Back     alignment and taxonomy information
>gi|327291302|ref|XP_003230360.1| PREDICTED: neutral alpha-glucosidase AB-like, partial [Anolis carolinensis] Back     alignment and taxonomy information
>gi|47225253|emb|CAG09753.1| unnamed protein product [Tetraodon nigroviridis] Back     alignment and taxonomy information
>gi|395852478|ref|XP_003798765.1| PREDICTED: neutral alpha-glucosidase AB isoform 1 [Otolemur garnettii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query92
UNIPROTKB|G4ML12 980 MGG_08623 "Neutral alpha-gluco 0.597 0.056 0.727 1.3e-17
UNIPROTKB|F5H6X6 847 GANAB "Neutral alpha-glucosida 0.913 0.099 0.477 1.7e-17
UNIPROTKB|E9PKU7 852 GANAB "Neutral alpha-glucosida 0.913 0.098 0.477 1.7e-17
UNIPROTKB|Q14697 944 GANAB "Neutral alpha-glucosida 0.913 0.088 0.477 2e-17
MGI|MGI:1097667 944 Ganab "alpha glucosidase 2 alp 0.913 0.088 0.466 2e-17
RGD|1309775 944 Ganab "glucosidase, alpha; neu 0.913 0.088 0.466 2e-17
UNIPROTKB|F1Q4J0 944 GANAB "Uncharacterized protein 0.913 0.088 0.477 3.3e-17
UNIPROTKB|I3LNH3 944 GANAB "Neutral alpha-glucosida 0.913 0.088 0.477 3.3e-17
UNIPROTKB|P79403 944 GANAB "Neutral alpha-glucosida 0.913 0.088 0.477 3.3e-17
UNIPROTKB|E2R729 966 GANAB "Uncharacterized protein 0.913 0.086 0.477 3.4e-17
UNIPROTKB|G4ML12 MGG_08623 "Neutral alpha-glucosidase AB" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
 Score = 227 (85.0 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 40/55 (72%), Positives = 47/55 (85%)

Query:     2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKST 56
             YR YNLDVFEY LDSPMSLY AIPF+ AH    +VGVFWLNAAETW+D+T++KS+
Sbjct:   291 YRFYNLDVFEYILDSPMSLYGAIPFMQAHRKDSTVGVFWLNAAETWIDITKAKSS 345




GO:0005575 "cellular_component" evidence=ND
GO:0043581 "mycelium development" evidence=IEP
UNIPROTKB|F5H6X6 GANAB "Neutral alpha-glucosidase AB" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PKU7 GANAB "Neutral alpha-glucosidase AB" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q14697 GANAB "Neutral alpha-glucosidase AB" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1097667 Ganab "alpha glucosidase 2 alpha neutral subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1309775 Ganab "glucosidase, alpha; neutral AB" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q4J0 GANAB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LNH3 GANAB "Neutral alpha-glucosidase AB" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P79403 GANAB "Neutral alpha-glucosidase AB" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2R729 GANAB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P79403GANAB_PIG3, ., 2, ., 1, ., 8, 40.51110.91300.0889yesN/A
Q9US55GLU2A_SCHPO3, ., 2, ., 1, ., 8, 40.64700.55430.0552yesN/A
Q14697GANAB_HUMAN3, ., 2, ., 1, ., 8, 40.51110.91300.0889yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query92
pfam1380268 pfam13802, Gal_mutarotas_2, Galactose mutarotase-l 9e-18
COG1501 772 COG1501, COG1501, Alpha-glucosidases, family 31 of 3e-06
>gnl|CDD|222390 pfam13802, Gal_mutarotas_2, Galactose mutarotase-like Back     alignment and domain information
 Score = 69.8 bits (172), Expect = 9e-18
 Identities = 20/48 (41%), Positives = 27/48 (56%)

Query: 2  YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVD 49
          YRL+N D + Y+ +S   LY +IPF  +       GVF+ N A TW D
Sbjct: 21 YRLWNTDAYGYDAESTDPLYKSIPFYISLRPSRGYGVFFDNTARTWFD 68


This family is found N-terminal to glycosyl-hydrolase domains, and appears to be similar to the galactose mutarotase superfamily. Length = 68

>gnl|CDD|224418 COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 92
KOG1066|consensus 915 100.0
PF1380268 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1 99.53
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 98.38
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 98.23
PRK10426 635 alpha-glucosidase; Provisional 97.79
PRK10658 665 putative alpha-glucosidase; Provisional 97.58
>KOG1066|consensus Back     alignment and domain information
Probab=100.00  E-value=2.3e-34  Score=246.36  Aligned_cols=84  Identities=60%  Similarity=1.013  Sum_probs=79.5

Q ss_pred             eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccCCccccCcccceeeecccCCCCCCCCCCC
Q psy11533          2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFVSGSGGDGGPRSS   81 (92)
Q Consensus         2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (92)
                      |||||||||||+++|||+||||||||++|++.+++|+||+|||||||||+++.. +  .+++++++.++++.    ..|+
T Consensus       243 YRLyNlDVFEYe~~spmalYGSIP~m~ah~~~r~~g~fW~NAAeTWVDi~~~t~-~--~~~s~~~~~~~~s~----~~p~  315 (915)
T KOG1066|consen  243 YRLYNLDVFEYELNSPMALYGSIPFMLAHGPNRDVGIFWLNAAETWVDIQSSTT-D--GLFSKMVDPVSGSQ----KVPQ  315 (915)
T ss_pred             eeEeecceEEEecCCcchheecccEEEecCCCCceeeEEecchhheEEeecccc-c--cccccccccCCCCC----CCCC
Confidence            999999999999999999999999999999999999999999999999988743 3  58999999999998    8999


Q ss_pred             ceeeEEeccCC
Q psy11533         82 TEVRFMSESGE   92 (92)
Q Consensus        82 ~~thWmSESG~   92 (92)
                      ++||||||||+
T Consensus       316 ~~thw~SEsGi  326 (915)
T KOG1066|consen  316 TDTHWMSESGI  326 (915)
T ss_pred             ccceeeccCCc
Confidence            99999999996



>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query92
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 2e-16
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 1e-11
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 2e-11
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 3e-11
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 3e-10
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 1e-09
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 2e-08
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Length = 693 Back     alignment and structure
 Score = 71.3 bits (175), Expect = 2e-16
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 2   YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKST 56
           Y +YN+D   Y+      LY +IP   +     + G F+ +A++   DV   +  
Sbjct: 81  YVMYNVDAGAYKKYQ-DPLYVSIPLFISVKDGVATGYFFNSASKVIFDVGLEEYD 134


>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Length = 875 Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Length = 898 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Length = 908 Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Length = 666 Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Length = 1027 Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Length = 773 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query92
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 99.08
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 99.02
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 98.95
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 98.86
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 98.83
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 98.55
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 98.09
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 98.08
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 94.02
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
Probab=99.08  E-value=2.2e-10  Score=95.78  Aligned_cols=50  Identities=20%  Similarity=0.206  Sum_probs=44.2

Q ss_pred             eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccC
Q psy11533          2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRS   53 (92)
Q Consensus         2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~   53 (92)
                      |+|||.|+++|.. +.++|||+|||++++ .+.+.||||+|++++++|+...
T Consensus        70 ~~l~n~D~~~~~~-~~~~lY~~~Pf~~~~-~~~~~Gvf~~n~~~~~~d~~~~  119 (666)
T 3nsx_A           70 YISNCTDDPIHTE-DKRSLYGAHNFIIVS-GKTTFGLFFDYPSKLTFDIGYT  119 (666)
T ss_dssp             EEECCCCCSSCCT-TCCCCSEECCEEEEE-SSSCEEEEEECCSCEEEEESSS
T ss_pred             EeeccCCCCCccc-cchhhhhcceEEEEE-cCcceeEEEecCCcEEEEeccc
Confidence            7999999999864 557999999999987 4678999999999999999754



>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query92
d2f2ha2247 Putative glucosidase YicI, N-terminal domain {Esch 98.36
>d2f2ha2 b.30.5.11 (A:1-247) Putative glucosidase YicI, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: YicI N-terminal domain-like
domain: Putative glucosidase YicI, N-terminal domain
species: Escherichia coli [TaxId: 562]
Probab=98.36  E-value=3.2e-07  Score=67.18  Aligned_cols=45  Identities=20%  Similarity=0.231  Sum_probs=37.7

Q ss_pred             eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccC
Q psy11533          2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRS   53 (92)
Q Consensus         2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~   53 (92)
                      ++|||.|.+.   .+ .++|++|||+++.   +.-||||.|++.+.+|+...
T Consensus       179 ~~~wN~D~g~---~~-~~~Y~~iPf~~s~---~gyGvf~dn~~~~~~d~g~~  223 (247)
T d2f2ha2         179 VETWNRDGGT---ST-EQAYKNIPFYMTN---RGYGVLVNHPQCVSFEVGSE  223 (247)
T ss_dssp             EECCCCCCTT---SB-SCCSEEEEEEEET---TSEEEEECCSSCCEEEESSS
T ss_pred             EEEEECCCCc---cc-CCcccccCEEEeC---CeEEEEEECCCCeEEEEccC
Confidence            6899999753   23 4799999999984   46899999999999999755