Psyllid ID: psy11545

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGKSKKHHSEIYVKPSQQIDSFGFLRRYQII
cEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccccccccccccccccccccccccccc
cHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccHccccccHcccccccccEEEcc
VLFEYslgaflswdtVAAISTIIPVLSIIAgclmpespswllsqgrKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQfsgvnpvtfyAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISsigcgvsmtgLGLYIFATkdfwpeykfpafvsyLPVLMLMTFTAASTIGYLVVPwvmigevyptkvrgivgglTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAgkskkhhseiyvkpsqqidsfgflrRYQII
VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRrlrannydvekevqglyefskrqetqksRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGkskkhhseiyvkpsqqidsfgFLRRYQII
VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGKSKKHHSEIYVKPSQQIDSFGFLRRYQII
*LFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYE************FKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETK**********************Y******IDSFGFLRRY***
VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQG********************AAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIE***************************LRRYQII
VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQ**********EIYVKPSQQIDSFGFLRRYQII
VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGK********************FLRR****
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGKSKKHHSEIYVKPSQQIDSFGFLRRYQII
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query337 2.2.26 [Sep-21-2011]
B4QBN2857 Facilitated trehalose tra N/A N/A 0.931 0.366 0.314 5e-48
B4HNS1488 Facilitated trehalose tra N/A N/A 0.896 0.618 0.307 9e-47
B0WC46517 Facilitated trehalose tra N/A N/A 0.931 0.607 0.286 1e-46
Q8MKK4488 Facilitated trehalose tra no N/A 0.928 0.641 0.302 2e-46
B4P624856 Facilitated trehalose tra N/A N/A 0.910 0.358 0.308 6e-46
B3NSE1856 Facilitated trehalose tra N/A N/A 0.931 0.366 0.299 8e-46
Q17NV8806 Facilitated trehalose tra N/A N/A 0.931 0.389 0.286 9e-46
B4QBN3488 Facilitated trehalose tra N/A N/A 0.896 0.618 0.304 1e-45
A1Z8N1857 Facilitated trehalose tra no N/A 0.931 0.366 0.311 2e-45
Q7PIR5793 Facilitated trehalose tra no N/A 0.931 0.395 0.283 2e-45
>sp|B4QBN2|TRE11_DROSI Facilitated trehalose transporter Tret1-1 OS=Drosophila simulans GN=Tret1-1 PE=3 SV=2 Back     alignment and function desciption
 Score =  191 bits (486), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 177/321 (55%), Gaps = 7/321 (2%)

Query: 1   VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRAN 60
           +L  +  G+F++W  +A +   +PV  +I   L+PE+P W + +G ++  R +L+ LR  
Sbjct: 539 ILLCFVAGSFMNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKALKWLRGK 598

Query: 61  NYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPV 120
             DVE E++GL       + Q SRN   T+  + +   LKP  I +      QFSG+N V
Sbjct: 599 EADVEPELKGLMRSQADADRQASRN---TMLELFKRINLKPLSISLGLMFFQQFSGINAV 655

Query: 121 TFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMT 180
            FY V IFKDAG+ +++NL  +I+GIV    T    +++ ++GR+ L +IS I   ++++
Sbjct: 656 IFYTVQIFKDAGSTIDSNLCTIIVGIVNFFATFMGILLIDRLGRKILLYISDIAMILTLS 715

Query: 181 GLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGI 240
            LG + F  K   P+    + + +LP+   + +    ++G+  +PW+M+GE+ P K+RG 
Sbjct: 716 ILGGF-FYCKAHGPDV---SHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGP 771

Query: 241 VGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQ 300
              + T    F  F+  K++      +   G F ++G I  +G  F  +Y+PET+ KTL+
Sbjct: 772 AASVVTAFNWFCTFVVTKTFQDLTGAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLE 831

Query: 301 EIEEQFAGKSKKHHSEIYVKP 321
           +IE +  G+ ++  S   +KP
Sbjct: 832 DIERKMMGRVRRMSSVANIKP 852
Low-capacity facilitative transporter for trehalose. Does not transport maltose, sucrose or lactose. Mediates the bidirectional transfer of trehalose. Responsible for the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source, thereby regulating trehalose levels in the hemolymph.
Drosophila simulans (taxid: 7240)
>sp|B4HNS1|TRE12_DROSE Facilitated trehalose transporter Tret1-2 homolog OS=Drosophila sechellia GN=Tret1-2 PE=3 SV=1 Back     alignment and function description
>sp|B0WC46|TRET1_CULQU Facilitated trehalose transporter Tret1 OS=Culex quinquefasciatus GN=Tret1 PE=3 SV=1 Back     alignment and function description
>sp|Q8MKK4|TRE12_DROME Facilitated trehalose transporter Tret1-2 homolog OS=Drosophila melanogaster GN=Tret1-2 PE=2 SV=1 Back     alignment and function description
>sp|B4P624|TRET1_DROYA Facilitated trehalose transporter Tret1 OS=Drosophila yakuba GN=Tret1 PE=3 SV=1 Back     alignment and function description
>sp|B3NSE1|TRET1_DROER Facilitated trehalose transporter Tret1 OS=Drosophila erecta GN=Tret1 PE=3 SV=1 Back     alignment and function description
>sp|Q17NV8|TRET1_AEDAE Facilitated trehalose transporter Tret1 OS=Aedes aegypti GN=Tret1 PE=3 SV=1 Back     alignment and function description
>sp|B4QBN3|TRE12_DROSI Facilitated trehalose transporter Tret1-2 homolog OS=Drosophila simulans GN=Tret1-2 PE=3 SV=1 Back     alignment and function description
>sp|A1Z8N1|TRE11_DROME Facilitated trehalose transporter Tret1-1 OS=Drosophila melanogaster GN=Tret1-1 PE=1 SV=1 Back     alignment and function description
>sp|Q7PIR5|TRET1_ANOGA Facilitated trehalose transporter Tret1 OS=Anopheles gambiae GN=Tret1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
291461583 527 sugar transporter 12 [Nilaparvata lugens 0.896 0.573 0.565 1e-101
307195649 461 Sugar transporter ERD6-like 5 [Harpegnat 0.919 0.672 0.504 3e-93
110762820 514 PREDICTED: facilitated trehalose transpo 0.922 0.605 0.509 2e-92
380022321 514 PREDICTED: facilitated trehalose transpo 0.922 0.605 0.506 3e-92
332017821 461 Sugar transporter ERD6-like 6 [Acromyrme 0.934 0.683 0.493 5e-92
322800745 499 hypothetical protein SINV_13705 [Solenop 0.919 0.621 0.501 1e-91
383854868 538 PREDICTED: facilitated trehalose transpo 0.922 0.578 0.506 3e-91
170028144 471 sugar transporter [Culex quinquefasciatu 0.949 0.679 0.483 9e-90
157133171423 sugar transporter [Aedes aegypti] gi|108 0.949 0.756 0.494 1e-89
307175920 461 Sugar transporter ERD6-like 4 [Camponotu 0.919 0.672 0.501 1e-89
>gi|291461583|dbj|BAI83426.1| sugar transporter 12 [Nilaparvata lugens] Back     alignment and taxonomy information
 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/311 (56%), Positives = 229/311 (73%), Gaps = 9/311 (2%)

Query: 1   VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRAN 60
           V  EY  GA  SW  VA +S+ +P ++ I    +PE+PSWLLS G+ D CR SL +LR  
Sbjct: 199 VTLEYMFGALYSWKLVALLSSTVPTVAFICCFFLPETPSWLLSHGQVDKCRKSLVKLRGP 258

Query: 61  NYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPV 120
             DVE+E+Q +  +S +     S  +KET+ A++ P+ LKPFVIL LYF+IYQFSGVNPV
Sbjct: 259 TCDVEQELQDMVAYSNKNNLAHSLTWKETIQALIHPSALKPFVILALYFVIYQFSGVNPV 318

Query: 121 TFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMT 180
           TFYAV +FKD+GA++N  LA V++GIVRL+FT+ +CI+M+K GRR LTF+SS+ CG SM 
Sbjct: 319 TFYAVEVFKDSGANMNKYLATVLLGIVRLVFTVVACIVMRKCGRRPLTFVSSVLCGASMV 378

Query: 181 GLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGI 240
           GLG+Y+         Y F +   +LPV ++  F AASTIGYLVVPWVMIGEVYPTKVRGI
Sbjct: 379 GLGVYM---------YHFKSSAPWLPVALIFIFIAASTIGYLVVPWVMIGEVYPTKVRGI 429

Query: 241 VGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQ 300
           +GGLTTC  HF IFL VK++ + Q  ++K GTF +YG ISLLGTI+FY+YLPETK +TLQ
Sbjct: 430 IGGLTTCTAHFSIFLVVKTFPLIQDAISKPGTFCLYGVISLLGTIYFYIYLPETKGRTLQ 489

Query: 301 EIEEQFAGKSK 311
           EIE+ F+G++ 
Sbjct: 490 EIEDYFSGRTD 500

Source: Nilaparvata lugens

Species: Nilaparvata lugens

Genus: Nilaparvata

Family: Delphacidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307195649|gb|EFN77491.1| Sugar transporter ERD6-like 5 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|110762820|ref|XP_624970.2| PREDICTED: facilitated trehalose transporter Tret1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380022321|ref|XP_003694998.1| PREDICTED: facilitated trehalose transporter Tret1-like [Apis florea] Back     alignment and taxonomy information
>gi|332017821|gb|EGI58482.1| Sugar transporter ERD6-like 6 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322800745|gb|EFZ21649.1| hypothetical protein SINV_13705 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|383854868|ref|XP_003702942.1| PREDICTED: facilitated trehalose transporter Tret1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|170028144|ref|XP_001841956.1| sugar transporter [Culex quinquefasciatus] gi|167871781|gb|EDS35164.1| sugar transporter [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157133171|ref|XP_001662783.1| sugar transporter [Aedes aegypti] gi|108870926|gb|EAT35151.1| AAEL012655-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|307175920|gb|EFN65733.1| Sugar transporter ERD6-like 4 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
FB|FBgn0050035857 Tret1-1 "Trehalose transporter 0.931 0.366 0.308 5.3e-47
UNIPROTKB|B4QBN2857 Tret1-1 "Facilitated trehalose 0.931 0.366 0.311 1.9e-46
UNIPROTKB|B4HNS0857 Tret1-1 "Facilitated trehalose 0.931 0.366 0.308 3.1e-46
UNIPROTKB|B4HNS1488 Tret1-2 "Facilitated trehalose 0.896 0.618 0.304 6.2e-46
FB|FBgn0033644488 Tret1-2 "Trehalose transporter 0.928 0.641 0.299 1.6e-45
UNIPROTKB|B4QBN3488 Tret1-2 "Facilitated trehalose 0.896 0.618 0.300 9.1e-45
UNIPROTKB|B4P624856 Tret1 "Facilitated trehalose t 0.931 0.366 0.302 1e-44
UNIPROTKB|B0WC46517 Tret1 "Facilitated trehalose t 0.931 0.607 0.292 1.2e-44
UNIPROTKB|B3NSE1856 Tret1 "Facilitated trehalose t 0.931 0.366 0.295 1.3e-44
UNIPROTKB|A9ZSY2502 Tret1 "Facilitated trehalose t 0.925 0.621 0.304 2.4e-44
FB|FBgn0050035 Tret1-1 "Trehalose transporter 1-1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 499 (180.7 bits), Expect = 5.3e-47, P = 5.3e-47
 Identities = 99/321 (30%), Positives = 177/321 (55%)

Query:     1 VLFEYSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRAN 60
             +L  +  G+F++W  +A +   +PV  +I   L+PE+P W + +G ++  R +L+ LR  
Sbjct:   539 ILLCFVAGSFMNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKALKWLRGK 598

Query:    61 NYDVEKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPV 120
               DVE E++GL       + Q SRN   T+  +++   LKP  I +      QFSG+N V
Sbjct:   599 EADVEPELKGLMRSQADADRQASRN---TMLELLKLNNLKPLSISLGLMFFQQFSGINAV 655

Query:   121 TFYAVNIFKDAGAHVNNNLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMT 180
              FY V IFKDAG+ ++ NL  +I+GIV  + T    +++ + GR+ L ++S I   +++ 
Sbjct:   656 IFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLF 715

Query:   181 GLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGI 240
              LG + +  K + P+    + + +LP+   + +    ++G+  +PW+M+GE+ P K+RG 
Sbjct:   716 VLGGFFYC-KTYGPDV---SHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGS 771

Query:   241 VGGLTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQ 300
                + T    F  F+  K++      +   G F ++G I  +G  F  +Y+PET+ KTL+
Sbjct:   772 AASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLE 831

Query:   301 EIEEQFAGKSKKHHSEIYVKP 321
             +IE +  G+ ++  S   +KP
Sbjct:   832 DIERKMMGRVRRMSSVANIKP 852
GO:0005355 "glucose transmembrane transporter activity" evidence=ISS
GO:0008643 "carbohydrate transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0015771 "trehalose transport" evidence=IDA
GO:0016020 "membrane" evidence=IDA
UNIPROTKB|B4QBN2 Tret1-1 "Facilitated trehalose transporter Tret1-1" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
UNIPROTKB|B4HNS0 Tret1-1 "Facilitated trehalose transporter Tret1-1" [Drosophila sechellia (taxid:7238)] Back     alignment and assigned GO terms
UNIPROTKB|B4HNS1 Tret1-2 "Facilitated trehalose transporter Tret1-2 homolog" [Drosophila sechellia (taxid:7238)] Back     alignment and assigned GO terms
FB|FBgn0033644 Tret1-2 "Trehalose transporter 1-2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|B4QBN3 Tret1-2 "Facilitated trehalose transporter Tret1-2 homolog" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
UNIPROTKB|B4P624 Tret1 "Facilitated trehalose transporter Tret1" [Drosophila yakuba (taxid:7245)] Back     alignment and assigned GO terms
UNIPROTKB|B0WC46 Tret1 "Facilitated trehalose transporter Tret1" [Culex quinquefasciatus (taxid:7176)] Back     alignment and assigned GO terms
UNIPROTKB|B3NSE1 Tret1 "Facilitated trehalose transporter Tret1" [Drosophila erecta (taxid:7220)] Back     alignment and assigned GO terms
UNIPROTKB|A9ZSY2 Tret1 "Facilitated trehalose transporter Tret1" [Apis mellifera ligustica (taxid:7469)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 2e-36
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 8e-33
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 1e-30
TIGR00898505 TIGR00898, 2A0119, cation transport protein 3e-10
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 6e-08
pfam13347425 pfam13347, MFS_2, MFS/sugar transport protein 0.003
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information 
 Score =  136 bits (345), Expect = 2e-36
 Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 9/295 (3%)

Query: 11  LSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQG 70
           L W     +  I   L  +    +PESP WL+ +GR +  R SL RLR  +   +KE+  
Sbjct: 193 LGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTS-GEDKELLD 251

Query: 71  LYEFSKRQETQKSRNFKETLAAI--VEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIF 128
             E    + + + R+ + +  ++        +   + ++     QF+G+N + +Y+  IF
Sbjct: 252 ELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF 311

Query: 129 KDAGAHVNNN-LAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIF 187
           ++AG   ++  L ++I+G V   FT  +  ++ + GRR L  I + G  + +  LG+   
Sbjct: 312 ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGA 371

Query: 188 ATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTC 247
           +                + ++ ++ F A   +G+  VPWV++ E++P  +R     +   
Sbjct: 372 SF-----VTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVA 426

Query: 248 ACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEI 302
           A     F+    +      +   G F+ +G +++LG IF Y +LPETK +TL+EI
Sbjct: 427 ANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 481
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 337
KOG0569|consensus485 100.0
KOG0254|consensus513 99.98
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.97
KOG0253|consensus528 99.96
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.96
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.96
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.95
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.94
TIGR00898505 2A0119 cation transport protein. 99.93
KOG0252|consensus538 99.89
PRK10642490 proline/glycine betaine transporter; Provisional 99.88
KOG0255|consensus521 99.87
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.83
PRK09952438 shikimate transporter; Provisional 99.82
PRK10489417 enterobactin exporter EntS; Provisional 99.81
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.81
PRK11663434 regulatory protein UhpC; Provisional 99.8
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.79
PRK03893496 putative sialic acid transporter; Provisional 99.78
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.78
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.77
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.77
TIGR00891405 2A0112 putative sialic acid transporter. 99.77
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.76
PRK12307426 putative sialic acid transporter; Provisional 99.76
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.75
TIGR00893399 2A0114 d-galactonate transporter. 99.75
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.75
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.75
PRK15075434 citrate-proton symporter; Provisional 99.74
PRK09528420 lacY galactoside permease; Reviewed 99.74
PRK03545390 putative arabinose transporter; Provisional 99.74
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 99.74
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.73
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 99.72
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.72
PRK11010491 ampG muropeptide transporter; Validated 99.71
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.71
TIGR00895398 2A0115 benzoate transport. 99.71
PRK15011393 sugar efflux transporter B; Provisional 99.71
PRK11663 434 regulatory protein UhpC; Provisional 99.7
TIGR00895 398 2A0115 benzoate transport. 99.7
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 99.7
PRK09705393 cynX putative cyanate transporter; Provisional 99.69
PRK05122399 major facilitator superfamily transporter; Provisi 99.69
PRK09874408 drug efflux system protein MdtG; Provisional 99.69
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.68
PRK03545 390 putative arabinose transporter; Provisional 99.68
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.67
KOG2533|consensus495 99.67
TIGR00893 399 2A0114 d-galactonate transporter. 99.67
PLN00028476 nitrate transmembrane transporter; Provisional 99.67
PRK10213 394 nepI ribonucleoside transporter; Reviewed 99.67
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.67
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.66
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.66
PRK12382392 putative transporter; Provisional 99.66
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.66
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.65
PRK15403 413 multidrug efflux system protein MdtM; Provisional 99.65
KOG2532|consensus466 99.65
PRK14995 495 methyl viologen resistance protein SmvA; Provision 99.65
PRK10473 392 multidrug efflux system protein MdtL; Provisional 99.65
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 99.64
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.64
PRK10054 395 putative transporter; Provisional 99.64
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 99.64
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.63
TIGR00891 405 2A0112 putative sialic acid transporter. 99.63
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.63
PRK03699394 putative transporter; Provisional 99.62
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 99.62
PRK10091 382 MFS transport protein AraJ; Provisional 99.62
PLN00028 476 nitrate transmembrane transporter; Provisional 99.62
TIGR00897402 2A0118 polyol permease family. This family of prot 99.62
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 99.62
PRK11902402 ampG muropeptide transporter; Reviewed 99.62
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.61
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.61
TIGR00900365 2A0121 H+ Antiporter protein. 99.61
PRK10504 471 putative transporter; Provisional 99.61
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.61
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.61
PRK10091382 MFS transport protein AraJ; Provisional 99.61
PRK11652 394 emrD multidrug resistance protein D; Provisional 99.6
PRK12307 426 putative sialic acid transporter; Provisional 99.6
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 99.6
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.6
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.59
KOG1330|consensus 493 99.59
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.59
PRK09874 408 drug efflux system protein MdtG; Provisional 99.59
PRK10504471 putative transporter; Provisional 99.58
TIGR00892 455 2A0113 monocarboxylate transporter 1. 99.58
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.58
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.58
PRK11043401 putative transporter; Provisional 99.58
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.57
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 99.57
TIGR00900 365 2A0121 H+ Antiporter protein. 99.57
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 99.56
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 99.56
PRK03699 394 putative transporter; Provisional 99.56
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 99.56
PRK10077 479 xylE D-xylose transporter XylE; Provisional 99.56
PRK15462 493 dipeptide/tripeptide permease D; Provisional 99.55
PRK03893 496 putative sialic acid transporter; Provisional 99.54
PRK11646 400 multidrug resistance protein MdtH; Provisional 99.54
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.54
PRK11043 401 putative transporter; Provisional 99.54
PRK10489 417 enterobactin exporter EntS; Provisional 99.54
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.53
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.52
PRK10207 489 dipeptide/tripeptide permease B; Provisional 99.52
PRK10054395 putative transporter; Provisional 99.52
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 99.52
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 99.51
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.51
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 99.51
PRK10642 490 proline/glycine betaine transporter; Provisional 99.51
PRK09705 393 cynX putative cyanate transporter; Provisional 99.5
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.5
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.49
PRK03633381 putative MFS family transporter protein; Provision 99.49
PRK05122 399 major facilitator superfamily transporter; Provisi 99.49
TIGR00897 402 2A0118 polyol permease family. This family of prot 99.49
PRK10429473 melibiose:sodium symporter; Provisional 99.49
KOG2615|consensus 451 99.49
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 99.49
PRK10406 432 alpha-ketoglutarate transporter; Provisional 99.49
PRK12382 392 putative transporter; Provisional 99.49
PRK11646400 multidrug resistance protein MdtH; Provisional 99.48
PRK11195 393 lysophospholipid transporter LplT; Provisional 99.47
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.46
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.46
COG2211467 MelB Na+/melibiose symporter and related transport 99.46
TIGR00898 505 2A0119 cation transport protein. 99.46
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 99.46
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 99.45
TIGR00901356 2A0125 AmpG-related permease. 99.45
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.44
PRK09952 438 shikimate transporter; Provisional 99.44
PRK15075 434 citrate-proton symporter; Provisional 99.44
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.44
PRK09669444 putative symporter YagG; Provisional 99.43
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 99.43
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.43
PRK11195393 lysophospholipid transporter LplT; Provisional 99.43
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.43
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.42
TIGR00896355 CynX cyanate transporter. This family of proteins 99.42
PRK11462460 putative transporter; Provisional 99.42
PF13347428 MFS_2: MFS/sugar transport protein 99.42
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.41
PRK10133438 L-fucose transporter; Provisional 99.41
PRK09584 500 tppB putative tripeptide transporter permease; Rev 99.4
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.4
KOG0255|consensus 521 99.39
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.39
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.38
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.38
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.38
PRK03633 381 putative MFS family transporter protein; Provision 99.38
PTZ00207 591 hypothetical protein; Provisional 99.37
PRK11652394 emrD multidrug resistance protein D; Provisional 99.37
PRK09848448 glucuronide transporter; Provisional 99.37
TIGR00805 633 oat sodium-independent organic anion transporter. 99.36
KOG3764|consensus 464 99.36
TIGR00901 356 2A0125 AmpG-related permease. 99.36
PRK09528 420 lacY galactoside permease; Reviewed 99.36
PRK15011 393 sugar efflux transporter B; Provisional 99.36
KOG2504|consensus509 99.35
KOG2532|consensus 466 99.35
PRK10133 438 L-fucose transporter; Provisional 99.34
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.34
PRK11010 491 ampG muropeptide transporter; Validated 99.33
TIGR00896 355 CynX cyanate transporter. This family of proteins 99.32
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.32
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.32
PRK11902 402 ampG muropeptide transporter; Reviewed 99.31
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.31
COG2270438 Permeases of the major facilitator superfamily [Ge 99.31
KOG0569|consensus 485 99.3
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.28
KOG2533|consensus 495 99.27
KOG1330|consensus493 99.27
KOG2504|consensus 509 99.25
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.24
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 99.24
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.23
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 99.21
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.2
KOG0254|consensus 513 99.19
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 99.19
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 99.16
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.14
TIGR02718 390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.1
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.07
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 99.05
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.02
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.0
KOG4686|consensus459 99.0
KOG2816|consensus 463 98.99
KOG0252|consensus 538 98.97
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 98.95
KOG3762|consensus618 98.93
KOG2325|consensus 488 98.9
PRK10207489 dipeptide/tripeptide permease B; Provisional 98.89
TIGR00788 468 fbt folate/biopterin transporter. The only functio 98.88
PTZ00207591 hypothetical protein; Provisional 98.86
KOG0253|consensus 528 98.83
KOG2563|consensus480 98.82
KOG3764|consensus464 98.79
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.77
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 98.74
TIGR00889 418 2A0110 nucleoside transporter. This family of prot 98.73
PRK09584500 tppB putative tripeptide transporter permease; Rev 98.71
PRK09669 444 putative symporter YagG; Provisional 98.68
PRK11462 460 putative transporter; Provisional 98.6
PF13347 428 MFS_2: MFS/sugar transport protein 98.59
PRK10429 473 melibiose:sodium symporter; Provisional 98.53
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.51
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 98.48
KOG3626|consensus 735 98.45
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 98.44
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 98.42
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 98.39
KOG2615|consensus451 98.31
TIGR00805633 oat sodium-independent organic anion transporter. 98.26
PRK09848 448 glucuronide transporter; Provisional 98.18
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 98.17
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 98.16
KOG2563|consensus 480 98.12
PF1283277 MFS_1_like: MFS_1 like family 98.06
PF11700 477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.06
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 98.03
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.01
COG2211 467 MelB Na+/melibiose symporter and related transport 98.01
KOG2816|consensus463 98.01
PRK15462493 dipeptide/tripeptide permease D; Provisional 98.0
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 97.96
PF03209 403 PUCC: PUCC protein; InterPro: IPR004896 This prote 97.94
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 97.89
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.84
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 97.8
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 97.79
COG0477 338 ProP Permeases of the major facilitator superfamil 97.71
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 97.55
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 97.47
KOG3098|consensus461 97.41
KOG3626|consensus 735 97.38
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 97.29
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 97.22
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 97.21
KOG3810|consensus433 97.04
TIGR01272 310 gluP glucose/galactose transporter. Disruption of 97.03
PF06963 432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 96.95
KOG0637|consensus 498 96.87
COG2270 438 Permeases of the major facilitator superfamily [Ge 96.84
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 96.8
PF03219 491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 96.76
KOG2325|consensus488 96.68
KOG4686|consensus 459 96.51
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 96.48
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 96.42
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 96.27
PF02487 402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 96.23
KOG3098|consensus 461 96.17
KOG1237|consensus 571 96.07
KOG3574|consensus510 95.99
PRK03612 521 spermidine synthase; Provisional 95.44
PF13000 544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 94.8
KOG3762|consensus 618 94.78
COG3202 509 ATP/ADP translocase [Energy production and convers 94.58
KOG4332|consensus 454 94.27
KOG3574|consensus 510 94.23
KOG1479|consensus 406 94.22
KOG1479|consensus406 93.57
TIGR00939 437 2a57 Equilibrative Nucleoside Transporter (ENT). 91.47
KOG3880|consensus 409 91.03
PF11947153 DUF3464: Protein of unknown function (DUF3464); In 89.23
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 88.02
KOG4332|consensus454 86.63
>KOG0569|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.6e-38  Score=266.63  Aligned_cols=295  Identities=26%  Similarity=0.424  Sum_probs=251.5

Q ss_pred             cchhhhhHHHHHHHhhHHHHHHHHHhcccCCChHHHHh-cCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhhhh
Q psy11545          6 SLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLS-QGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSR   84 (337)
Q Consensus         6 ~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~pesp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (337)
                      ++|....|++++.+..+++++.++...++||||||+.. |++.++|+++++.++.++++.++..++.++.++++.  .+.
T Consensus       176 ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~--~~~  253 (485)
T KOG0569|consen  176 LLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEEL--EKK  253 (485)
T ss_pred             hcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcc--ccc
Confidence            34555589999999999999999999999999999998 899999999999999887644443333333222221  234


Q ss_pred             cHHHHHHHhhcccchhHHHHHHHHHHHHHhcCccchhccchHHHhhcCCCchh-HHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy11545         85 NFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNN-NLAAVIMGIVRLIFTIASCIMMKKMG  163 (337)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g  163 (337)
                      +..+.++.++++..|+.+.+.+.+...++++|.+...+|...++.+.|++.+. .+.+...++...+.++++.+++||+|
T Consensus       254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g  333 (485)
T KOG0569|consen  254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG  333 (485)
T ss_pred             cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            56788999999999999999999999999999999999999999999998655 88889999999999999999999999


Q ss_pred             ChhhHHHHhHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhh
Q psy11545        164 RRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGG  243 (337)
Q Consensus       164 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  243 (337)
                      ||++++.++.++.+..+++.......+...      ....+..+...+.+...++.|.+|++|.+.+|++|++.|+.+++
T Consensus       334 RRpLll~~~~~~~~~~~~~~~~~~l~~~~~------~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s  407 (485)
T KOG0569|consen  334 RRPLLLISLSLMAVALLLMSIALFLSNSFG------SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS  407 (485)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence            999999999999988888777655411100      02234456777888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhcCCccchHHHHHHHHHHHHHhheeccCCCCCCHHHHHHHhccc
Q psy11545        244 LTTCACHFFIFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGK  309 (337)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  309 (337)
                      +..+.+++..++....++.+.+.+|- ..|+.+.+.+++..++.++++||||+|+..|+.++.+++
T Consensus       408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~  472 (485)
T KOG0569|consen  408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR  472 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence            99999999999999999999999887 688899999999999999999999999999998887766

>KOG0254|consensus Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0569|consensus Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG0254|consensus Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG3810|consensus Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>KOG0637|consensus Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>KOG1237|consensus Back     alignment and domain information
>KOG3574|consensus Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>KOG4332|consensus Back     alignment and domain information
>KOG3574|consensus Back     alignment and domain information
>KOG1479|consensus Back     alignment and domain information
>KOG1479|consensus Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG3880|consensus Back     alignment and domain information
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG4332|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 4e-27
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure 
Iteration: 1

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 28/288 (9%)
Query: 34  MPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLAAI 93
           +PESP WL+S+G+++     LR++  N    +            QE + S +        
Sbjct: 220 VPESPRWLMSRGKQEQAEGILRKIMGNTLATQA----------VQEIKHSLDHGRKTGGR 269
Query: 94  VEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNNNL-AAVIMGIVRLIFT 152
           +    +   VI ++  +  QF G+N V +YA  +FK  GA  +  L   +I+G++ L FT
Sbjct: 270 LLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFT 329
Query: 153 IASCIMMKKMGRRSLTFISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMT 212
           + + + + K GR+ L  I ++G  + M  LG   +         + P  V+ L +L    
Sbjct: 330 VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT--------QAPGIVALLSMLF--- 378
Query: 213 FTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCA---CHFFI---FLTVKSYNMFQTH 266
           + AA  + +  V WV++ E++P  +RG    +   A    ++F+   F  +   +    H
Sbjct: 379 YVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAH 438
Query: 267 LTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGKSKKHH 314
                ++ +YGC+ +L  +F + ++PETK KTL+E+E  +  ++KK  
Sbjct: 439 FHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPETKKTQ 486
  Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.81
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.75
2cfq_A417 Lactose permease; transport, transport mechanism, 99.73
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 99.69
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.66
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 99.64
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.62
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.59
2xut_A 524 Proton/peptide symporter family protein; transport 99.56
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.47
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 99.44
2xut_A524 Proton/peptide symporter family protein; transport 99.25
2cfq_A 417 Lactose permease; transport, transport mechanism, 99.05
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=100.00  E-value=5.4e-32  Score=239.64  Aligned_cols=280  Identities=26%  Similarity=0.533  Sum_probs=209.7

Q ss_pred             hHHHHHHHhhHHHHHHHHHhcccCCChHHHHhcCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhhhhcHHHHHH
Q psy11545         12 SWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETLA   91 (337)
Q Consensus        12 ~Wr~~f~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (337)
                      +||+.+.+..+++++.++..+++||||||+..+++.+++++.+++...++...++..+.. +   ...++++.  .....
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~-~---~~~~~~~~--~~~~~  271 (491)
T 4gc0_A          198 GWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIK-H---SLDHGRKT--GGRLL  271 (491)
T ss_dssp             HHHHHHHTTHHHHHHHHHHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHH--TTHHH
T ss_pred             hhHHHhhhhhhhhhhhhhhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHH-H---HHHhhhhh--hhHHH
Confidence            699999999999999999999999999999999999999999887765432211111111 1   11000100  01111


Q ss_pred             HhhcccchhHHHHHHHHHHHHHhcCccchhccchHHHhhcCCCchh-HHHHHHHHHHHHHHHHHHHHHhhhcCChhhHHH
Q psy11545         92 AIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDAGAHVNN-NLAAVIMGIVRLIFTIASCIMMKKMGRRSLTFI  170 (337)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~  170 (337)
                      .+    ..++.........++++.+.+.+.+|.+.+.+..+.+... .....+.++..+++.+++++++||+|||+.++.
T Consensus       272 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~  347 (491)
T 4gc0_A          272 MF----GVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII  347 (491)
T ss_dssp             HS----CCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHH
T ss_pred             Hh----cccHHHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhcc
Confidence            11    1234455666667777888888899999999888776444 666777889999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhhHHHHHHH
Q psy11545        171 SSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCACH  250 (337)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  250 (337)
                      +....+++.+.++.....           .......++...++..+++.++.++.+.+.+|++|++.|+++.|+.+..++
T Consensus       348 ~~~~~~~~~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~  416 (491)
T 4gc0_A          348 GALGMAIGMFSLGTAFYT-----------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQW  416 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhc-----------ccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence            988888877776654433           233445555556666677778888889999999999999999999999999


Q ss_pred             HHHHHHHHHhHHHHH------hcCCccchHHHHHHHHHHHHHhheeccCCCCCCHHHHHHHhccccCC
Q psy11545        251 FFIFLTVKSYNMFQT------HLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQEIEEQFAGKSKK  312 (337)
Q Consensus       251 ~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~  312 (337)
                      +++++++.+++.+.+      ..++...|++++++++++.++.++++||||++++||+++.++++.++
T Consensus       417 ~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~~~~  484 (491)
T 4gc0_A          417 LANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPETKK  484 (491)
T ss_dssp             HHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHhCCCCcc
Confidence            999999988876543      34566688899999999998888999999999999999888765543
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 337
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 1e-06
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 47.4 bits (111), Expect = 1e-06
 Identities = 32/304 (10%), Positives = 76/304 (25%), Gaps = 15/304 (4%)

Query: 5   YSLGAFLSWDTVAAISTIIPVLSIIAGCLMPESPSWLLSQGRKDACRNSLRRLRANNYDV 64
             +  +     V      +  L  +A      +  ++ +         +   +R      
Sbjct: 152 GIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSC 211

Query: 65  EKEVQGLYEFSKRQETQKSRNFKETLAAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYA 124
                  Y+     +  +    + T   I     L   ++  +         +       
Sbjct: 212 GLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDW 271

Query: 125 VNIFKDAGAHVNNN---LAAVIMGIVRLIFTIASCIMMKKMGRRSLTFISSIGCGVSMTG 181
              +     H   +    A  +     +  T+    M  K+ R +          +    
Sbjct: 272 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 331

Query: 182 LGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIV 241
             +Y                 +    ++ M        G +++  +   E+ P K  G  
Sbjct: 332 TIVYWM-----------NPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTA 380

Query: 242 GGLTTCACHFF-IFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYLPETKNKTLQ 300
            G T    +                    +G F++    S+L  I   V +   K +  Q
Sbjct: 381 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQ 440

Query: 301 EIEE 304
            ++E
Sbjct: 441 LLQE 444

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.78
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.71
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.7
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 99.32
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.6e-19  Score=155.38  Aligned_cols=247  Identities=11%  Similarity=0.087  Sum_probs=142.9

Q ss_pred             hHHHHHHHhhHHHHHHHHHhc-ccCCChHHHHhcCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhhhhcHHHHH
Q psy11545         12 SWDTVAAISTIIPVLSIIAGC-LMPESPSWLLSQGRKDACRNSLRRLRANNYDVEKEVQGLYEFSKRQETQKSRNFKETL   90 (337)
Q Consensus        12 ~Wr~~f~~~~~~~~~~~~~~~-~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (337)
                      +||+.|++.+++.++..+..+ +++|+|+........+. +          .+.+++      ..++.+++...++....
T Consensus       181 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~------~~~~~~~~~~~~~~~~~  243 (447)
T d1pw4a_         181 DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEY-K----------NDYPDD------YNEKAEQELTAKQIFMQ  243 (447)
T ss_dssp             CSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTT-C----------CC-------------------CCTHHHHH
T ss_pred             cccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhh-h----------hhcccc------hhhccccccchhhHHHH
Confidence            899999999988877766555 47777753211111100 0          000000      00001111222233344


Q ss_pred             HHhhcccchhHHHHHHHHHHHHHhcCccchhccchHHHhhc-CCCchh-HHHHHHHHHHHHHHHHHHHHHhhhcCChhhH
Q psy11545         91 AAIVEPACLKPFVILMLYFLIYQFSGVNPVTFYAVNIFKDA-GAHVNN-NLAAVIMGIVRLIFTIASCIMMKKMGRRSLT  168 (337)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~  168 (337)
                      ..++++..+.......+...     .......+.+.++.+. +.+... ........++.+++.+++|+++||++|++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  318 (447)
T d1pw4a_         244 YVLPNKLLWYIAIANVFVYL-----LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG  318 (447)
T ss_dssp             HTSSCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred             HHHcCchHHHHHHHhhhhhh-----hhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccc
Confidence            44544433322222222211     1344555666666554 666444 7778888899999999999999999988765


Q ss_pred             HHHhHHHHHHHHHHHHHHHHhcCCCCCCCCCcchhHHHHHHHHHHHHHHhccccchhhhhhcccCCccchhhhhhHHHHH
Q psy11545        169 FISSIGCGVSMTGLGLYIFATKDFWPEYKFPAFVSYLPVLMLMTFTAASTIGYLVVPWVMIGEVYPTKVRGIVGGLTTCA  248 (337)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  248 (337)
                      ........+...........  .        ..+.+...+..... ++...+..+..+.+..|.+|++.||++.|+.+..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~  387 (447)
T d1pw4a_         319 ATGVFFMTLVTIATIVYWMN--P--------AGNPTVDMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF  387 (447)
T ss_dssp             HHHHHHHHHHHHHHHHTTSC--C--------TTCHHHHHHHHHHH-HHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHhc--c--------cccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            55444433333332221111  0        11223333333333 3333344456678899999999999999999988


Q ss_pred             HHHH-HHHHHHHhHHHHHhcCCccchHHHHHHHHHHHHHhheec
Q psy11545        249 CHFF-IFLTVKSYNMFQTHLTKEGTFLMYGCISLLGTIFFYVYL  291 (337)
Q Consensus       249 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (337)
                      .+++ ..++|.+.+.+.+..|++..+++.+++++++.++...+.
T Consensus       388 ~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  431 (447)
T d1pw4a_         388 GYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM  431 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence            8875 566789999999999999888888777777766555443
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure