Psyllid ID: psy11589

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
Protein Sequence
MFIKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEccccHHHHHHHHccccccccccHccHHHHHccHHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccEEEcccccccccccHHHHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccc
Coil and Loop (DISEMBL)
mfikhensdfvcnlcppgskvVVKYVHYLERHVRKHHTMFlrlpkvhshfrkknaihvnninkkvsykcpdcsvivvsysgfkshldihNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSlnvhsyshtntqfvcsycgntyknpkaltshirnshtihqksiCDVCGKEFRMKRQLKEHMavhttdrpfvcnmcpstfkLKKHLRQHYKVHLKME
Flexible Loop (DISEMBL)
mfikhensdfvcnlcppgsKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVhenvrehqcSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMavhttdrpfvcNMCPSTFKLKKHLRQHYKVHLKME
Low Complexity Region (SEG)
MFIKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME
Disordered region (IsUnstruct)
********DFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKV*****
Disordered Region (DISOPRED)
MFIKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHL***
Disordered Region (DISEMBL)
MFIKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME
Disordered Region (DISPRO)
*****ENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQH*KVH****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFIKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	262	2.2.26 [Sep-21-2011]
Q96NG8	517	Zinc finger protein 582 O	yes	N/A	0.763	0.386	0.394	7e-34
Q9NQX1	630	PR domain zinc finger pro	no	N/A	0.862	0.358	0.334	7e-32
Q9CXE0	599	PR domain zinc finger pro	no	N/A	0.862	0.377	0.338	1e-31
Q02386	682	Zinc finger protein 45 OS	no	N/A	0.767	0.294	0.352	3e-31
Q5MCW4	686	Zinc finger protein 569 O	no	N/A	0.954	0.364	0.326	9e-31
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.736	0.211	0.346	1e-30
P51508	661	Zinc finger protein 81 OS	no	N/A	0.725	0.287	0.336	1e-30
Q80W31	679	Zinc finger protein 569 O	no	N/A	0.725	0.279	0.373	4e-30
Q8WV37	535	Zinc finger protein 480 O	no	N/A	0.729	0.357	0.360	4e-30
Q08DG8	657	Zinc finger protein 135 O	no	N/A	0.725	0.289	0.367	5e-30

>sp|Q96NG8|ZN582_HUMAN Zinc finger protein 582 OS=Homo sapiens GN=ZNF582 PE=2 SV=1

 Score =  144 bits (363), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 57  HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
           H N  + K  Y+C +C     S S F  H  +H  EK Y C  C+K F R+  L+ H + 
Sbjct: 217 HENIHSGKKPYECKECGKAFNSGSNFIQHQRVHTGEKPYECKDCEKAFSRSSQLIEH-QR 275

Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
            H   + +QC  CGKAF  I+++KVH RIHTGEK Y C+ CG +F+    L  H   HT 
Sbjct: 276 THTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKECGKTFSHRSQLIQHQTVHTG 335

Query: 177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
            + + C  CG  +     L  H R  HT  +   C VCGK FR+  QLK+H  +HT ++P
Sbjct: 336 RKLYECKECGKAFNQGSTLIRHQR-IHTGEKPYECKVCGKAFRVSSQLKQHQRIHTGEKP 394

Query: 236 FVCNMCPSTFKLKKHLRQHYKVH 258
           + C +C   FK   HL  HY++H
Sbjct: 395 YQCKVCGRAFKRVSHLTVHYRIH 417

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q9NQX1|PRDM5_HUMAN PR domain zinc finger protein 5 OS=Homo sapiens GN=PRDM5 PE=1 SV=2

 Score =  137 bits (345), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 123/257 (47%), Gaps = 31/257 (12%)

Query: 3   IKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNIN 62
           I  E+  + C LC  G         +  R+V K+H       K HS  R           
Sbjct: 369 IHSEDKPYKCKLCGKG---------FAHRNVYKNHK------KTHSEER----------- 402

Query: 63  KKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVR 122
               ++C +C  +  +    + HL IHN E+ + CH C   F R   L  H++ VHE  +
Sbjct: 403 ---PFQCEECKALFRTPFSLQRHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHK 459

Query: 123 EHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVC 181
           +++C +C KAF   + ++ H + HTGEK+ +C  CG  FA  G+L VH  SHT  + + C
Sbjct: 460 KYRCELCNKAFVTPSVLRSHKKTHTGEKEKICPYCGQKFASSGTLRVHIRSHTGERPYQC 519

Query: 182 SYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC 241
            YC   +     L  HIR +HT  +   C  C K F  KR L EH   HT ++PF C++C
Sbjct: 520 PYCEKGFSKNDGLKMHIR-THTREKPYKCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVC 578

Query: 242 PSTFKLKKHLRQHYKVH 258
              F LKK L +H   H
Sbjct: 579 DLAFSLKKMLIRHKMTH 595

Sequence-specific DNA-binding transcription factor. Represses transcription at least in part by recruitment of the histone methyltransferase EHMT2/G9A and histone deacetylases such as HDAC1. Regulates hematopoiesis-associated protein-coding and microRNA (miRNA) genes. May regulate the expression of proteins involved in extracellular matrix development and maintenance, including fibrillar collagens, such as COL4A1 and COL11A1, connective tissue components, such as HAPLN1, and molecules regulating cell migration and adhesion, including EDIL3 and TGFB2. May caused G2/M arrest and apoptosis in cancer cells.

Homo sapiens (taxid: 9606)

>sp|Q9CXE0|PRDM5_MOUSE PR domain zinc finger protein 5 OS=Mus musculus GN=Prdm5 PE=2 SV=2

 Score =  136 bits (343), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 122/257 (47%), Gaps = 31/257 (12%)

Query: 3   IKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNIN 62
           I  E+  + C LC  G         +  R+V K+H       K HS  R           
Sbjct: 338 IHSEDKPYQCKLCGKG---------FAHRNVYKNHK------KTHSEER----------- 371

Query: 63  KKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVR 122
               ++C  C  +  +    + HL IHN E+ + CH C   F R   L  H++ VHE  +
Sbjct: 372 ---PFQCDACKALFRTPFSLQRHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHK 428

Query: 123 EHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVC 181
           +++C +C KAF   + ++ H + HTGEK+ VC  CG  FA  G+L VH  SHT  + + C
Sbjct: 429 KYRCELCNKAFVTPSVLRSHKKTHTGEKEKVCPYCGQKFASSGTLRVHIRSHTGERPYQC 488

Query: 182 SYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC 241
            YC   +     L  HIR +HT  +   C  C K F  KR L EH   HT ++PF C++C
Sbjct: 489 PYCEKGFSKNDGLKMHIR-THTREKPYQCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVC 547

Query: 242 PSTFKLKKHLRQHYKVH 258
              F LKK L +H   H
Sbjct: 548 DLAFSLKKMLIRHKMTH 564

Sequence-specific DNA-binding transcription factor. Represses transcription at least in part by recruitment of the histone methyltransferase EHMT2/G9A and histone deacetylases such as HDAC1. Regulates hematopoiesis-associated protein-coding and microRNA (miRNA) genes (By similarity). May regulate the expression of proteins involved in extracellular matrix development and maintenance, connective tissue components and molecules regulating cell migration and adhesion. May caused G2/M arrest and apoptosis in cancer cells.

Mus musculus (taxid: 10090)

>sp|Q02386|ZNF45_HUMAN Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=2 SV=2

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 3/204 (1%)

Query: 56  IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIK 115
           IH      +  YKC +C       S   +H   H  EK Y C  C K F R+ +L  H +
Sbjct: 433 IHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVHCR 492

Query: 116 AVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
            +H   + ++C  CGKAF+  ++++VH R+HTGEK Y C  CG  F++   L  H   HT
Sbjct: 493 -IHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHT 551

Query: 176 NTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR 234
             + + C  CG  +       +H R  HT  +   CDVCGK FR +  L+ H  VHT +R
Sbjct: 552 GEKPYQCEECGKGFCRASNFLAH-RGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGER 610

Query: 235 PFVCNMCPSTFKLKKHLRQHYKVH 258
           P+ C  C   F    +L+ H +VH
Sbjct: 611 PYKCEECGKVFSWSSYLQAHQRVH 634

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  134 bits (336), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 8   SDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSY 67
           + F CN C  G    +  + +L  H  +         K  SH ++K   H    +++ SY
Sbjct: 184 TPFKCNHCGKGFNQTLDLIRHLRIHTGEKPYECSNCRKAFSH-KEKLIKHYKIHSREQSY 242

Query: 68  KCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCS 127
           KC +C    +  S    H  IH  EK Y C  C+K F +  NL+ H K +H   + ++C+
Sbjct: 243 KCNECGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEK-IHTGEKPYECN 301

Query: 128 VCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGN 186
            CGKAF+   ++  H ++HTGEK Y C  CG +F    SL +H  SHT  + + C  CG 
Sbjct: 302 ECGKAFSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGK 361

Query: 187 TYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFK 246
            +     L  H+R  HT  +   C+ CGK F     L  HM  HT ++P+ C  C   F 
Sbjct: 362 AFSQFSMLIIHVR-IHTGEKPYECNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFS 420

Query: 247 LKKHLRQHYKVHLK 260
            KK+   H K+H +
Sbjct: 421 HKKNFITHQKIHTR 434

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 3/196 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           YKC +C       S  ++H  +H  EK Y C  C K F RN  L  H + VH   + ++C
Sbjct: 553 YKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQR-VHTGEKPYKC 611

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
             CGK F+  ++++ H R+HTGEK + CE CG  F+   +L +H   HT  + + C  CG
Sbjct: 612 EECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECG 671

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
             +     L +H R  HT  +   CD CGK F  +  L+ H +VH+ +RP++C +C   F
Sbjct: 672 KGFSKASTLLAHQR-VHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGF 730

Query: 246 KLKKHLRQHYKVHLKM 261
             + +L+ H +VH ++
Sbjct: 731 SQRAYLQGHQRVHTRV 746

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P51508|ZNF81_HUMAN Zinc finger protein 81 OS=Homo sapiens GN=ZNF81 PE=1 SV=3

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 3/193 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           +KC +C       S  + H  IH  E+ Y C  C + F++  +L+ H + +H   + ++C
Sbjct: 414 HKCSECGKAFTQKSTLRMHQRIHTGERSYICTQCGQAFIQKAHLIAHQR-IHTGEKPYEC 472

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
           S CGK+F   + +++H RIHTGEK Y+C  CG +F    +LN H  SHT  + ++C+ CG
Sbjct: 473 SDCGKSFPSKSQLQMHKRIHTGEKPYICTECGKAFTNRSNLNTHQKSHTGEKSYICAECG 532

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
             + +      H +  HT  +  +C  CG+ F  K +L  H  +HTT++P+ C  C  +F
Sbjct: 533 KAFTDRSNFNKH-QTIHTGEKPYVCADCGRAFIQKSELITHQRIHTTEKPYKCPDCEKSF 591

Query: 246 KLKKHLRQHYKVH 258
             K HL+ H ++H
Sbjct: 592 SKKPHLKVHQRIH 604

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q80W31|ZN569_MOUSE Zinc finger protein 569 OS=Mus musculus GN=Znf569 PE=2 SV=2

 Score =  132 bits (331), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           Y+C +C         F +H  +H  EK Y C+ C K F +  +L  H+++ H   + ++C
Sbjct: 487 YECNECGKAFSQKQNFITHQKVHTGEKPYDCNKCGKAFSQIASLTLHLRS-HTGEKPYEC 545

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
             CGKAF+  + + +HMR HTGEK YVC  CG +F+   SL VH   HT  + + C+ CG
Sbjct: 546 EKCGKAFSQCSLLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKPYECNKCG 605

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
             +    +LT HIR  HT  +   C  CGK F     L  HM  HT ++P+VC  C   F
Sbjct: 606 KAFSQSSSLTIHIRG-HTGEKPFDCSNCGKAFSQISSLTLHMRKHTGEKPYVCIECGKAF 664

Query: 246 KLKKHLRQHYKVH 258
             K HL +H ++H
Sbjct: 665 SQKSHLVRHQRIH 677

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q8WV37|ZN480_HUMAN Zinc finger protein 480 OS=Homo sapiens GN=ZNF480 PE=1 SV=2

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 3/194 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           YKC +C       +    H  IH  EK Y C+ C KVF++N +L  H + +H   + ++C
Sbjct: 343 YKCDECGKAFYRIALLVRHQKIHTGEKPYKCNECGKVFIQNSHLAQHWR-IHTGEKPYKC 401

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
           + CGK F  ++N+  H RIHTGEK Y C  CG +F+ +  L+ H   HT  + + CS CG
Sbjct: 402 NECGKVFNQLSNLARHRRIHTGEKPYKCNECGKAFSEYSGLSAHLVIHTGEKPYKCSECG 461

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
             +++  +LT+H R  HT  +   C+ CGK F     L  H  +HT ++P+ CN C   F
Sbjct: 462 KAFRHKLSLTNHQR-IHTGERPYKCNECGKVFNRIAHLARHRKIHTGEKPYKCNECGKAF 520

Query: 246 KLKKHLRQHYKVHL 259
               +L QH+ +H+
Sbjct: 521 SRISYLAQHWTIHM 534

Involved in transcriptional regulation as an activator.

Homo sapiens (taxid: 9606)

>sp|Q08DG8|ZN135_BOVIN Zinc finger protein 135 OS=Bos taurus GN=ZNF135 PE=2 SV=1

 Score =  131 bits (330), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 3/193 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           Y+C +C       S    H  IH  EK Y C  C K F +   L+ H + +H   R ++C
Sbjct: 353 YQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQR-IHTGERPYEC 411

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
           S CG+AF+  T +  H RIHTGEK Y C  CG +F+   SL+ H  +HT  + + CS CG
Sbjct: 412 SECGRAFSQSTLLTEHRRIHTGEKPYGCNECGKAFSHSSSLSQHERTHTGEKPYACSQCG 471

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
             ++    LT H R +HT  +   C  CGK F     L +H  +HT ++P+ CN C   F
Sbjct: 472 KAFRQSTHLTQHQR-THTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKPYECNECGKAF 530

Query: 246 KLKKHLRQHYKVH 258
                L QH ++H
Sbjct: 531 SQLAPLIQHQRIH 543

Plays a role in the regulation of cell morphology and cytoskeletal organization. May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
410929077	818	PREDICTED: uncharacterized protein LOC10	0.763	0.244	0.379	6e-35
410926643	537	PREDICTED: zinc finger protein 571-like	0.767	0.374	0.392	2e-34
322801374	1014	hypothetical protein SINV_01211 [Solenop	0.721	0.186	0.393	5e-34
189239347	871	PREDICTED: similar to Zinc finger protei	0.935	0.281	0.334	8e-34
348543323	451	PREDICTED: zinc finger protein 624-like	0.854	0.496	0.378	2e-33
47214082	582	unnamed protein product [Tetraodon nigro	0.725	0.326	0.383	4e-33
326666790	420	PREDICTED: zinc finger protein 484-like	0.786	0.490	0.363	8e-33
348530662	525	PREDICTED: zinc finger protein 234-like	0.767	0.382	0.367	1e-32
426243297	547	PREDICTED: zinc finger protein 582 isofo	0.763	0.365	0.394	2e-32
426243295	517	PREDICTED: zinc finger protein 582 isofo	0.763	0.386	0.394	2e-32

>gi|410929077|ref|XP_003977926.1| PREDICTED: uncharacterized protein LOC101079032 [Takifugu rubripes]

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 77/203 (37%), Positives = 105/203 (51%), Gaps = 3/203 (1%)

Query: 57  HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
           H+ +   K  Y C  C       S  K H+ IH  E+ Y C  C K FLR  +L+ H + 
Sbjct: 596 HIRSHTGKRLYLCKTCGKAFAGGSSLKRHIRIHTGERPYLCKTCGKAFLRGHDLIIHSRD 655

Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
            H   R + C  CGK F  IT +K H R+HTGE+ Y+C+TCG +F    SL VH   HT 
Sbjct: 656 -HTGERPYVCKTCGKTFKRITILKNHFRVHTGERPYLCKTCGKAFMDRSSLKVHMRVHTG 714

Query: 177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
            + ++C  CG T+     LT H+R+ HT  +  +C  CGK F++   L +HM +H+ +RP
Sbjct: 715 ERPYLCKICGKTFLRSSDLTIHLRD-HTGERPYVCKTCGKAFKVNSSLNKHMRIHSRERP 773

Query: 236 FVCNMCPSTFKLKKHLRQHYKVH 258
            VC  C   F     L QH   H
Sbjct: 774 HVCETCGEAFTQSCELVQHMSTH 796

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410926643|ref|XP_003976787.1| PREDICTED: zinc finger protein 571-like [Takifugu rubripes]

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 3/204 (1%)

Query: 56  IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIK 115
            H+ +   +  Y C  C  I +  S  + H+ IH  E+ + C  C K F RN  L  H+ 
Sbjct: 256 THLRDHTGERPYVCKTCGKIFIDSSSLRRHMRIHTDERPFACKTCGKTFKRNHQLKAHL- 314

Query: 116 AVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
            VH   R + C  CGK F   +N+K+HMRIHTGEK Y+C+TCG +FA   SL  H   HT
Sbjct: 315 IVHTGDRPYGCKTCGKTFNTNSNLKIHMRIHTGEKPYLCKTCGKTFAGASSLRRHVRIHT 374

Query: 176 NTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR 234
             + ++C  C  T+ N  +L  H++  HT  +  +C  CGK F+   QLK H+ VHT +R
Sbjct: 375 GERPYLCKTCEKTFINSNSLNDHMK-VHTGERPFVCKTCGKTFKQNYQLKVHLRVHTDER 433

Query: 235 PFVCNMCPSTFKLKKHLRQHYKVH 258
           PFVC  C   FK    L  H ++H
Sbjct: 434 PFVCKTCGKAFKKNSALNVHVRIH 457

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|322801374|gb|EFZ22035.1| hypothetical protein SINV_01211 [Solenopsis invicta]

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 69   CPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSV 128
            C  C+    S   + +H+  H+ EK Y CHIC K F+++ +L  H+K VH+ V+ H C +
Sbjct: 820  CKSCNKKFCSRKSYWAHVRTHSGEKSYTCHICGKQFVQSGSLYYHLKHVHDGVKNHTCDI 879

Query: 129  CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFV--CSYCGN 186
            CG++FA  T M+ H RIHTGE+ YVC TCG +F    SL +HS +HT+ +F   C+YCG 
Sbjct: 880  CGRSFAMKTAMEDHRRIHTGERPYVCHTCGKTFKTKASLYIHSKTHTD-EFPHKCTYCGK 938

Query: 187  TYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFK 246
             ++  + +  H+   HT  +   CDVCGK F +K  L  H  VH+ ++P+ C  C  +F 
Sbjct: 939  RFRWRQQMLGHL-TVHTGEKNHTCDVCGKGFGVKNDLTRHKRVHSEEKPYTCQQCGISFG 997

Query: 247  LKKHLRQHYKVHL 259
             K++L+ H ++ L
Sbjct: 998  QKRYLKSHERLKL 1010

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239347|ref|XP_973915.2| PREDICTED: similar to Zinc finger protein 43 (Zinc finger protein 39) (Zinc protein HTF6) (Zinc finger protein KOX27) [Tribolium castaneum]

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 137/263 (52%), Gaps = 18/263 (6%)

Query: 4   KHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNN--- 60
           + E   F C  CP     +      +  HVR+ H    +  KVH     K A  ++    
Sbjct: 232 EEERPYFGCQYCP----AIFFVQKAIADHVREEHGKEYKNCKVHV---PKQAPPIDEELI 284

Query: 61  ------INKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHI 114
                 ++ ++ Y C +C   + S   +  H+ IH  E+ + C +C K F  ++ LV H+
Sbjct: 285 KEAKVVVDGRIYYNCKECGKNLHSPYTYVWHIRIHTGERPFVCDLCGKQFRVSQGLVRHL 344

Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSH 174
           +  H+ +++  C +CG+ FA   N++ H RIHT E+ YVC+ CG SF    SL VH  SH
Sbjct: 345 RETHQGIKKFPCDLCGRMFATRRNVEEHRRIHTNERPYVCDLCGKSFKQKASLFVHKRSH 404

Query: 175 TN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD 233
            N   F CSYC   ++    L  HI   HT  +   CD+CG+ FR+K +LK H  +H+ +
Sbjct: 405 KNHFPFKCSYCNQGFRTKPPLLVHI-TRHTGEKPYKCDICGRCFRIKYELKRHKLIHSDE 463

Query: 234 RPFVCNMCPSTFKLKKHLRQHYK 256
           +P+VCN+C  +F+ K++LR H K
Sbjct: 464 KPWVCNVCGFSFRQKRYLRNHMK 486

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348543323|ref|XP_003459133.1| PREDICTED: zinc finger protein 624-like [Oreochromis niloticus]

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 121/246 (49%), Gaps = 22/246 (8%)

Query: 25  YVHYLERHVRKHHTM-----------FLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCS 73
           Y   L RH+R H              F ++  + SH R    +H      +  Y C  C 
Sbjct: 184 YKSSLTRHLRVHKGERPHSCSTCGRGFSQMINLKSHMR----VHTG----EKPYCCSTCG 235

Query: 74  VIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAF 133
                 S F+SHL IH  EK + C  C K F +  +L  HIK VH + + H CS+CGK F
Sbjct: 236 KTFSFSSPFRSHLRIHTGEKPHSCGTCGKKFYKKSDLESHIK-VHSDEKPHSCSMCGKRF 294

Query: 134 ADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPK 192
             + N+KVHMRIHTGEK Y C  CG+SF    SL  H  SHT  + F CS CG  +    
Sbjct: 295 KHMINLKVHMRIHTGEKPYSCRICGSSFRKKSSLECHVRSHTGEKPFACSICGKGFTQTP 354

Query: 193 ALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR 252
            L  H+R  HT  +   C  CGK FR    LK HM +HT ++P+ C  C  +F     L+
Sbjct: 355 NLKIHLR-IHTGERPYSCSTCGKSFRELSTLKTHMRIHTGEKPYSCGTCGKSFIQLAQLQ 413

Query: 253 QHYKVH 258
            H ++H
Sbjct: 414 NHLRIH 419

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47214082|emb|CAF95339.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 106/193 (54%), Gaps = 3/193 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           Y C  C            H  IH  EK+Y C  C+K F R+  L  H++ +H   + + C
Sbjct: 362 YVCTTCGKAFKDNDELSRHTRIHTGEKQYVCTTCRKAFKRSYELSRHVR-IHTGDKPYVC 420

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
           + CGKAF   T++  H+RIHTGEK YVC TCG +F    +L+ H   HT  + ++C+ CG
Sbjct: 421 NTCGKAFTQSTDLSYHVRIHTGEKPYVCTTCGKAFKQRNALSRHVRVHTGEKPYICNTCG 480

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
             ++    L+SH+R  HT  +  IC  CGKEFR+K+ L  HM +HT ++P+ C  C   F
Sbjct: 481 KDFRQSANLSSHMR-IHTGEKPHICKTCGKEFRLKKNLSSHMRIHTGEKPYTCKTCGKAF 539

Query: 246 KLKKHLRQHYKVH 258
           +    L  H K+H
Sbjct: 540 RQSSKLSDHLKIH 552

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666790|ref|XP_003198376.1| PREDICTED: zinc finger protein 484-like [Danio rerio]

 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 112/209 (53%), Gaps = 3/209 (1%)

Query: 51  RKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNL 110
           + K  +H+    ++  Y C  C        GFK+H+ IH  E+++ C  C+K F  + N 
Sbjct: 94  KSKLDVHMRVHTREQPYTCEQCGKSFGQKQGFKAHMKIHTGERKFTCQECEKSFYHSGNF 153

Query: 111 VCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVH 170
             H++ +H   +   C  CGK+F    N+ VHMR+HTGEK Y CE CG SF    S N H
Sbjct: 154 AAHMR-IHTGEKPFSCKQCGKSFCHKPNLDVHMRVHTGEKPYTCEQCGKSFGQKQSFNTH 212

Query: 171 SYSHTNTQF-VCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAV 229
              HT  +   C  CG +Y N ++L +H+R +HT  +   C +CGK F +K  L  HM V
Sbjct: 213 MRIHTGKRPCTCQQCGKSYYNARSLAAHMR-THTGERPFSCILCGKSFSLKLTLIAHMRV 271

Query: 230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           HT ++P +C  C  +F  K+ L  H ++H
Sbjct: 272 HTREKPHICKQCGKSFGQKQDLDIHMRIH 300

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348530662|ref|XP_003452829.1| PREDICTED: zinc finger protein 234-like [Oreochromis niloticus]

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 109/204 (53%), Gaps = 3/204 (1%)

Query: 56  IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIK 115
           +H+     +  Y C  C     + S FK H  IH  EK Y C IC K F ++ NL  H++
Sbjct: 294 VHMRTHTGEKPYACNTCGKRFTNLSAFKKHAAIHTGEKPYSCKICGKSFTQSGNLTVHMR 353

Query: 116 AVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
             H   + + C  CGK+F+  +N+ VHMR HTGEK Y+C  CG SF+   +L  H+  H+
Sbjct: 354 -THTGEKWYSCETCGKSFSRSSNLTVHMRTHTGEKPYLCNACGKSFSQSSALKRHALIHS 412

Query: 176 NTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR 234
             + + C  CG T+     LT H R  HT  +  IC  CG+ F      K H A+HT ++
Sbjct: 413 GEKPYSCKVCGKTFCQSSDLTVHSR-IHTGDKPHICKSCGRRFSDASAFKRHTAIHTGEK 471

Query: 235 PFVCNMCPSTFKLKKHLRQHYKVH 258
           P+ C +C ++F+   HL +H K+H
Sbjct: 472 PYSCKLCGNSFRQSGHLLRHMKIH 495

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426243297|ref|XP_004015495.1| PREDICTED: zinc finger protein 582 isoform 2 [Ovis aries]

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 57  HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
           H N  + K  Y+C +C     S S F  H  +H  EK Y C  C K F R+  L+ H + 
Sbjct: 247 HENIHSGKKPYECKECGKAFNSGSNFIQHQRVHTGEKPYECKDCAKAFSRSSQLIEHQR- 305

Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
           +H   + +QC  CGKAF  I+++KVH RIHTGEK Y C+ CG +F+    L  H   HT 
Sbjct: 306 IHTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKECGKAFSHRSQLIQHQTIHTG 365

Query: 177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
            + + C  CG  +     LT H R  HT  +   C  CGK FR+  QLK+H  +HT ++P
Sbjct: 366 KKLYECEECGKAFNQGSTLTRHQR-IHTGEKPYECKACGKAFRVSSQLKQHQRIHTGEKP 424

Query: 236 FVCNMCPSTFKLKKHLRQHYKVH 258
           + C +C   FK   HL  HY++H
Sbjct: 425 YQCKVCGRAFKRVSHLTVHYRIH 447

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426243295|ref|XP_004015494.1| PREDICTED: zinc finger protein 582 isoform 1 [Ovis aries]

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 57  HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
           H N  + K  Y+C +C     S S F  H  +H  EK Y C  C K F R+  L+ H + 
Sbjct: 217 HENIHSGKKPYECKECGKAFNSGSNFIQHQRVHTGEKPYECKDCAKAFSRSSQLIEH-QR 275

Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
           +H   + +QC  CGKAF  I+++KVH RIHTGEK Y C+ CG +F+    L  H   HT 
Sbjct: 276 IHTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKECGKAFSHRSQLIQHQTIHTG 335

Query: 177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
            + + C  CG  +     LT H R  HT  +   C  CGK FR+  QLK+H  +HT ++P
Sbjct: 336 KKLYECEECGKAFNQGSTLTRHQR-IHTGEKPYECKACGKAFRVSSQLKQHQRIHTGEKP 394

Query: 236 FVCNMCPSTFKLKKHLRQHYKVH 258
           + C +C   FK   HL  HY++H
Sbjct: 395 YQCKVCGRAFKRVSHLTVHYRIH 417

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	262
UNIPROTKB|Q96NG8	517	ZNF582 "Zinc finger protein 58	0.763	0.386	0.394	6.1e-39
ZFIN|ZDB-GENE-120214-29	518	si:ch73-367f21.5 "si:ch73-367f	0.927	0.469	0.347	6.1e-39
UNIPROTKB|F1RJG7	452	ZNF582 "Uncharacterized protei	0.763	0.442	0.389	1.3e-38
UNIPROTKB|J9NXG2	517	ZNF582 "Uncharacterized protei	0.763	0.386	0.389	1.6e-38
ZFIN|ZDB-GENE-110913-60	438	si:dkey-156k2.6 "si:dkey-156k2	0.961	0.575	0.339	2.1e-38
UNIPROTKB|F1MAL0	604	Zfp426l "Protein Zfp426l" [Rat	0.942	0.408	0.330	2.2e-38
ZFIN|ZDB-GENE-050913-136	846	zgc:113389 "zgc:113389" [Danio	0.931	0.288	0.349	3.1e-38
UNIPROTKB|Q17RR6	527	ZNF569 "ZNF569 protein" [Homo	0.946	0.470	0.329	3.4e-38
UNIPROTKB|F1MFQ5	517	ZNF582 "Uncharacterized protei	0.763	0.386	0.384	5.5e-38
ZFIN|ZDB-GENE-120703-48	448	si:dkey-8o9.5 "si:dkey-8o9.5"	0.797	0.466	0.350	7e-38

UNIPROTKB|Q96NG8 ZNF582 "Zinc finger protein 582" [Homo sapiens (taxid:9606)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 80/203 (39%), Positives = 109/203 (53%)

Query:    57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
             H N  + K  Y+C +C     S S F  H  +H  EK Y C  C+K F R+  L+ H + 
Sbjct:   217 HENIHSGKKPYECKECGKAFNSGSNFIQHQRVHTGEKPYECKDCEKAFSRSSQLIEH-QR 275

Query:   117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
              H   + +QC  CGKAF  I+++KVH RIHTGEK Y C+ CG +F+    L  H   HT 
Sbjct:   276 THTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKECGKTFSHRSQLIQHQTVHTG 335

Query:   177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
              + + C  CG  +     L  H R  HT  +   C VCGK FR+  QLK+H  +HT ++P
Sbjct:   336 RKLYECKECGKAFNQGSTLIRHQR-IHTGEKPYECKVCGKAFRVSSQLKQHQRIHTGEKP 394

Query:   236 FVCNMCPSTFKLKKHLRQHYKVH 258
             + C +C   FK   HL  HY++H
Sbjct:   395 YQCKVCGRAFKRVSHLTVHYRIH 417

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-120214-29 si:ch73-367f21.5 "si:ch73-367f21.5" [Danio rerio (taxid:7955)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 88/253 (34%), Positives = 126/253 (49%)

Query:    10 FVCNLCPPGSKVVVKYVHYLERHVRKHH-TMFLRLPKVHSHFRKKNAI--HVNNINKKVS 66
             + C +C  G     K    LE+H+  H        P+    FR KN +  H+     +  
Sbjct:   146 YPCQVC--GKSFREK--QSLEKHLTIHTGEKPYSCPECGKSFRVKNCLENHIKIHTGEKP 201

Query:    67 YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
             Y C +C          K H+ IH  EK + C  C K F  +++L  H++ +H   +   C
Sbjct:   202 YTCQECGKSFTEKQNLKRHMRIHTGEKPFTCSHCGKSFRVSKDLKIHVR-IHTGEKPFSC 260

Query:   127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
               CGK+F++   +  HMRIHTGEK +VC  CG  F    +L  H   HT  + + C  CG
Sbjct:   261 QQCGKSFSENKKLTSHMRIHTGEKPFVCSHCGKRFRGKQNLESHIRLHTGEKRYTCPQCG 320

Query:   186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
              +Y   K+L +HIR SHT  +   CD CGK FR +R LK H+ +HT ++PF C  C  +F
Sbjct:   321 KSYNEQKSLENHIR-SHTGEKPFACDQCGKSFRQQRILKGHIRIHTGEKPFTCPQCGKSF 379

Query:   246 KLKKHLRQHYKVH 258
               K  L +H K+H
Sbjct:   380 IEKTKLERHKKIH 392

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RJG7 ZNF582 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 79/203 (38%), Positives = 108/203 (53%)

Query:    57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
             H N  + K  Y+C +C     S S F  H  +H  EK Y C  C K F R+  L+ H + 
Sbjct:   152 HENIHSGKKPYECKECGKAFNSGSNFIQHQRVHTGEKPYECKDCAKAFSRSSQLIEH-QR 210

Query:   117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
             +H   + +QC  CGKAF  I+++KVH RIHTGEK Y C+ CG +F+    L  H   HT 
Sbjct:   211 IHTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKDCGKTFSHRSQLIQHQTIHTG 270

Query:   177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
              + + C  CG  +     L  H R  HT  +   C  CGK FR+  QLK+H  +HT ++P
Sbjct:   271 KKLYECKECGKAFNQGSTLIRHQR-IHTGEKPYECKACGKAFRVSSQLKQHQRIHTGEKP 329

Query:   236 FVCNMCPSTFKLKKHLRQHYKVH 258
             + C +C   FK   HL  HY++H
Sbjct:   330 YQCKVCGRAFKRVSHLTVHYRIH 352

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NXG2 ZNF582 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 79/203 (38%), Positives = 107/203 (52%)

Query:    57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
             H N  + K  Y+C +C     S S F  H  +H  EK Y C  C K F R+  L+ H + 
Sbjct:   217 HENIHSGKKPYECNECGKAFNSGSNFIQHQRVHTGEKPYECKDCAKAFSRSSQLIEH-QR 275

Query:   117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
             +H   + +QC  CGKAF  I+++KVH RIHTGEK Y C+ CG +F     L  H   HT 
Sbjct:   276 IHTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKECGKTFGHRSQLIQHQTIHTG 335

Query:   177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
              + + C  CG  +     L  H R  HT  +   C  CGK FR+  QLK+H  +HT ++P
Sbjct:   336 KKLYECKECGKAFNQGSTLIRHQR-IHTGEKPYECKACGKAFRVSSQLKQHQRIHTGEKP 394

Query:   236 FVCNMCPSTFKLKKHLRQHYKVH 258
             + C +C   FK   HL  HY++H
Sbjct:   395 YQCRVCSRAFKRVSHLTVHYRIH 417

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-60 si:dkey-156k2.6 "si:dkey-156k2.6" [Danio rerio (taxid:7955)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 89/262 (33%), Positives = 120/262 (45%)

Query:     1 MFIKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKH--HTMFLRLPKVHSHFRKKNA-IH 57
             M +      + C  C  G      ++   E H+R H     F       S  +K N  +H
Sbjct:    96 MRVHTREKPYTCEQC--GKSF--GHIQGFENHMRIHTGEKPFSCKQCGKSFSQKANLDVH 151

Query:    58 VNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAV 117
             +    K+  Y C  C        GF +H+ IH  E+ Y C  CKK F    N   H++ +
Sbjct:   152 MRVHTKERPYTCEQCGKSFTYKQGFTTHMRIHTGERPYTCQQCKKSFYHPGNFAVHMR-I 210

Query:   118 HENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNT 177
             H   R + C  CGK+F    N   HMRIHTGE+ Y C  CG SF   G+L VH  +HT  
Sbjct:   211 HTGERPYTCQQCGKSFYQSGNFAAHMRIHTGERPYSCIQCGKSFKQNGTLEVHMRTHTGD 270

Query:   178 Q-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF 236
             + F+C+ CG  +     L  H+R  HT  +   C  CGK F  K  L  HM +HT ++P+
Sbjct:   271 RSFICTQCGKHFSQKHDLNIHMR-IHTGKKPHTCTQCGKRFTQKTSLDNHMRIHTGEKPY 329

Query:   237 VCNMCPSTFKLKKHLRQHYKVH 258
              C  C  TF  K  L+ H K H
Sbjct:   330 RCTECGKTFPHKSTLKHHMKTH 351

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MAL0 Zfp426l "Protein Zfp426l" [Rattus norvegicus (taxid:10116)]

 Score = 412 (150.1 bits), Expect = 2.2e-38, P = 2.2e-38
 Identities = 87/263 (33%), Positives = 131/263 (49%)

Query:     3 IKHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRK--KNAIHVNN 60
             I  E    VC +C    K    Y   L  HV+ H+      P V     K  KN  ++N+
Sbjct:   336 IHTEEKSKVCKIC---GKSFANYSR-LSAHVKTHNE---EKPFVCKECGKAFKNMSYLND 388

Query:    61 ---INKKV-SYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
                I+  + SYKC +C    + +SG   H+ +H  EK Y C  C K F R+  L  HI+ 
Sbjct:   389 HVRIHTGIKSYKCMECGKAFLRWSGLTEHIRVHTGEKPYECKECGKTFSRSTQLTEHIRT 448

Query:   117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
              H  ++ ++C  CGKAF   + +  H+RIH+GEK + C+ CG +F     L  H  +HT 
Sbjct:   449 -HTGIKPYECKECGKAFTQYSGLATHVRIHSGEKPFACKECGKAFTRTSGLIHHVRTHTG 507

Query:   177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
              + F C +CG T+      T H++  H+  +  +C++CGK F     L  HM  HT ++P
Sbjct:   508 EKPFECVHCGKTFITSSHRTKHLK-IHSGEKPFVCNICGKAFIYSTSLNIHMRTHTGEKP 566

Query:   236 FVCNMCPSTFKLKKHLRQHYKVH 258
             ++C  C   F +   LR+H +VH
Sbjct:   567 YICKQCGKAFAVYSRLRKHSRVH 589

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-050913-136 zgc:113389 "zgc:113389" [Danio rerio (taxid:7955)]

 Score = 418 (152.2 bits), Expect = 3.1e-38, P = 3.1e-38
 Identities = 89/255 (34%), Positives = 130/255 (50%)

Query:     9 DFVCNLCPPGSKVVVKYVHYLERHVRKHH-TMFLRLPKVHSHFRKKNAIHVNNI--NKKV 65
             ++VC+ C    K  ++    L+RH R H         +  + FR  +A++++ +    + 
Sbjct:    34 EYVCSEC---EKTFIR-AEQLKRHQRIHTGEKPFSCVQCGTSFRHSSALNLHMLIHTGEK 89

Query:    66 SYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQ 125
             ++KC  C    +     K HL +H  EK Y C +C+K F   ++L  H K +H  VRE+ 
Sbjct:    90 THKCDQCDKTFLRALDLKIHLRVHTKEKTYSCSLCEKTFKYQQSLKNHQK-IHTGVREYV 148

Query:   126 CSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYC 184
             C  C K F     +K H RIHTGEK YVC  CG SF+L G+LN H   HT  + +VCS+C
Sbjct:   149 CFECKKTFIKAEQLKQHQRIHTGEKPYVCSHCGKSFSLLGNLNAHQRIHTGEKPYVCSHC 208

Query:   185 GNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLK-EHMAVHTTDRPFVCNMCPS 243
                +     L +H    HT  +   C  CGK FR    L   HM +HT ++PF C  C +
Sbjct:   209 NKRFSLLGTLKTH-EMIHTGEKPFTCVQCGKSFRQSSNLNLHHMLIHTGEKPFKCAQCGT 267

Query:   244 TFKLKKHLRQHYKVH 258
              F+    L+QH K+H
Sbjct:   268 NFRCMSALKQHMKIH 282

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q17RR6 ZNF569 "ZNF569 protein" [Homo sapiens (taxid:9606)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 83/252 (32%), Positives = 121/252 (48%)

Query:    10 FVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKC 69
             F CN C  G    +  + +L  H  +         K  SH ++K   H    +++ SYKC
Sbjct:    27 FKCNHCGKGFNQTLDLIRHLRIHTGEKPYECSNCRKAFSH-KEKLIKHYKIHSREQSYKC 85

Query:    70 PDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVC 129
              +C    +  S    H  IH  EK Y C  C+K F +  NL+ H K +H   + ++C+ C
Sbjct:    86 NECGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEK-IHTGEKPYECNEC 144

Query:   130 GKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTY 188
             GKAF+   ++  H ++HTGEK Y C  CG +F    SL +H  SHT  + + C  CG  +
Sbjct:   145 GKAFSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKPYKCDKCGKAF 204

Query:   189 KNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLK 248
                  L  H+R  HT  +   C+ CGK F     L  HM  HT ++P+ C  C   F  K
Sbjct:   205 SQFSMLIIHVR-IHTGEKPYECNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFSHK 263

Query:   249 KHLRQHYKVHLK 260
             K+   H K+H +
Sbjct:   264 KNFITHQKIHTR 275

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MFQ5 ZNF582 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/203 (38%), Positives = 107/203 (52%)

Query:    57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKA 116
             H N  + K  Y+C +C     S S F  H  +H  EK Y C  C K F R+  L+ H + 
Sbjct:   217 HENIHSGKKPYECKECGKAFNSGSNFIQHQRVHTGEKPYECKDCAKAFSRSSQLIEH-QR 275

Query:   117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
             +H   + +QC  C KAF  I+++KVH RIHTGEK Y C+ CG +F+    L  H   HT 
Sbjct:   276 IHTGEKPYQCKECSKAFNRISHLKVHYRIHTGEKPYACKECGKTFSHRSQLIQHQTVHTG 335

Query:   177 TQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
              + + C  CG  +     L  H R  HT  +   C  CGK FR+  QLK+H  +HT ++P
Sbjct:   336 KKLYECKECGKAFNQGSTLIRHQR-IHTGEKPYECKACGKAFRVSSQLKQHQRIHTGEKP 394

Query:   236 FVCNMCPSTFKLKKHLRQHYKVH 258
             + C +C   FK   HL  HY++H
Sbjct:   395 YQCKVCGRAFKRVSHLTVHYRIH 417

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-120703-48 si:dkey-8o9.5 "si:dkey-8o9.5" [Danio rerio (taxid:7955)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 75/214 (35%), Positives = 114/214 (53%)

Query:    50 FRKKNAIHVN-NINK-KVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRN 107
             F +K+ +HV+  ++  +  Y C  C        GFK H+ IH  E+++ C  C K F   
Sbjct:    91 FNQKSNLHVHLRVHTWEKPYTCKQCGKSFSQIQGFKVHMRIHTGERKFTCQKCGKSFYHA 150

Query:   108 RNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSL 167
              N   H++ +H   +   C  CGK+F+   N+ +HMRIHTGEK + C+ CG SF+    L
Sbjct:   151 GNFEAHMR-IHTGEKPFSCKQCGKSFSQKPNLDIHMRIHTGEKPFSCKQCGKSFSQKSHL 209

Query:   168 NVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEH 226
             ++H   HT  + + C  CG ++   ++  SH+R  HT  +   C  CGK FR  R L  H
Sbjct:   210 DIHMRVHTGEKPYTCEQCGQSFSQKQSFKSHMR-IHTGERPYTCQQCGKNFRHARNLAAH 268

Query:   227 MAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLK 260
             M +HT ++PF C  C  +F  K +L  H +VH +
Sbjct:   269 MRIHTGEKPFSCKQCGKSFSKKANLIAHMRVHTR 302

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	262
KOG2462|consensus	279		99.97
KOG1074|consensus	958		99.97
KOG3608|consensus	467		99.95
KOG2462|consensus	279		99.95
KOG1074|consensus	958		99.94
KOG3623|consensus	1007		99.94
KOG3608|consensus	467		99.93
KOG3623|consensus	1007		99.86
KOG3576|consensus	267		99.75
KOG3576|consensus	267		99.72
PLN03086	567	PRLI-interacting factor K; Provisional	99.39
PHA00733	128	hypothetical protein	99.38
PLN03086	567	PRLI-interacting factor K; Provisional	99.26
PHA00733	128	hypothetical protein	99.24
PHA02768	55	hypothetical protein; Provisional	99.19
KOG3993|consensus	500		99.04
KOG3993|consensus	500		99.04
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.98
PHA02768	55	hypothetical protein; Provisional	98.91
PHA00616	44	hypothetical protein	98.79
PHA00732	79	hypothetical protein	98.69
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.65
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.53
PHA00616	44	hypothetical protein	98.49
PHA00732	79	hypothetical protein	98.48
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.39
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.32
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.23
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.16
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.07
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.02
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.9
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.8
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.67
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.63
smart00355	26	ZnF_C2H2 zinc finger.	97.6
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.59
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.44
smart00355	26	ZnF_C2H2 zinc finger.	97.37
PRK04860	160	hypothetical protein; Provisional	97.21
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.17
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.16
KOG1146|consensus	1406		97.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.01
KOG2231|consensus	669		96.99
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.96
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.72
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.64
KOG2231|consensus	669		96.51
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.29
KOG1146|consensus	1406		96.21
KOG2482|consensus	423		96.21
KOG2785|consensus	390		96.16
KOG2482|consensus	423		95.94
KOG2785|consensus	390		95.92
PRK04860	160	hypothetical protein; Provisional	95.9
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.85
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.62
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.38
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.15
KOG4173|consensus	253		95.08
KOG2893|consensus	341		95.04
KOG2893|consensus	341		94.68
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.4
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.2
COG5048	467	FOG: Zn-finger [General function prediction only]	94.01
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.85
COG5048	467	FOG: Zn-finger [General function prediction only]	93.57
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.42
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.17
KOG4173|consensus	253		93.09
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.07
COG4049	65	Uncharacterized protein containing archaeal-type C	91.23
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.29
COG4049	65	Uncharacterized protein containing archaeal-type C	89.49
COG1592	166	Rubrerythrin [Energy production and conversion]	89.09
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	88.39
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.86
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.21
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	87.17
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	85.78
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	85.75
PHA00626	59	hypothetical protein	85.18
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	84.59
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	84.58
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	83.96
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	83.77
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	83.41
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.3
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	83.26
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	81.99
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	81.97
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	81.8
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.54
KOG2186|consensus	276		81.14

>KOG2462|consensus

Probab=99.97  E-value=6.3e-32  Score=203.36  Aligned_cols=135  Identities=30%  Similarity=0.653  Sum_probs=127.7

Q ss_pred             CCcccCccccccccCchhHHhHHhhhCC---CCccccCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHH
Q psy11589        121 VREHQCSVCGKAFADITNMKVHMRIHTG---EKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSH  197 (262)
Q Consensus       121 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H  197 (262)
                      ...|+|+.|++.+.+..+|.+|..+|..   .+.+.|+.|++.|.+...|..|+++|+ .+.+|.+||+.|.....|..|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhcc
Confidence            3458999999999999999999999864   567999999999999999999999998 689999999999999999999


Q ss_pred             HHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHh
Q psy11589        198 IRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       198 ~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      +| .|+||+||.|+.|++.|..+++|+.||++|.+.|+|+|..|+|+|...+-|.+|...
T Consensus       207 iR-THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  207 IR-THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cc-cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99 899999999999999999999999999999999999999999999999999999864

>KOG1074|consensus

Probab=99.97  E-value=1.6e-31  Score=226.62  Aligned_cols=78  Identities=35%  Similarity=0.774  Sum_probs=72.2

Q ss_pred             ccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhcCC-----CcccCC---cchhcCCCChHHH
Q psy11589        124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN-----TQFVCS---YCGNTYKNPKALT  195 (262)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----~~~~C~---~C~~~f~~~~~l~  195 (262)
                      -+|-+|.++..-...|+.|.++|.|++||+|.+||+.|.++.+|+.|+-.|..     .++.|+   +|.+.|...-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            48999999999999999999999999999999999999999999999999876     358899   9999999999999


Q ss_pred             HHHHhhc
Q psy11589        196 SHIRNSH  202 (262)
Q Consensus       196 ~H~~~~H  202 (262)
                      .|++ +|
T Consensus       686 QhIr-iH  691 (958)
T KOG1074|consen  686 QHIR-IH  691 (958)
T ss_pred             ceEE-ee
Confidence            9988 66

>KOG3608|consensus

Probab=99.95  E-value=2.4e-28  Score=188.94  Aligned_cols=232  Identities=22%  Similarity=0.389  Sum_probs=195.4

Q ss_pred             Cceecc--cCCCCCceeeehHHHHHHHhhhccCCccCccccccccccccccccccCCCcc---ceecCCCcccccchhHH
Q psy11589          8 SDFVCN--LCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKV---SYKCPDCSVIVVSYSGF   82 (262)
Q Consensus         8 ~~~~C~--~C~~~~~~~~~~~~~l~~H~~~~~~~~~~~~~l~~~~~~~~~~h~~~~~~~~---~~~C~~C~~~f~~~~~l   82 (262)
                      ..|.|.  .|+.    .|.+...|..|+..|.. |. ..+.           ..+..+++   +..+..|-+.+.++..|
T Consensus       133 ~~f~C~WedCe~----~F~s~~ef~dHV~~H~l-~c-eyd~-----------~~~~~D~~pv~~C~W~~Ct~~~~~k~~L  195 (467)
T KOG3608|consen  133 QNFRCGWEDCER----EFVSIVEFQDHVVKHAL-FC-EYDI-----------QKTPEDERPVTMCNWAMCTKHMGNKYRL  195 (467)
T ss_pred             hhhccChhhcCC----cccCHHHHHHHHHHhhh-hh-hhhh-----------hhCCCCCCceeeccchhhhhhhccHHHH
Confidence            346675  5999    99999999999987753 11 0000           11111222   34457899999999999


Q ss_pred             HhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhh-cCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccc
Q psy11589         83 KSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVH-ENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASF  161 (262)
Q Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  161 (262)
                      ++|++.|.+++...|+.|+..|.++..|..|+++.- ....+|.|..|.+.|.++..|..|+..|-.  -|+|+.|+-+.
T Consensus       196 reH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc  273 (467)
T KOG3608|consen  196 REHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTC  273 (467)
T ss_pred             HHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCC
Confidence            999999999999999999999999999999976543 345689999999999999999999999864  59999999999


Q ss_pred             cCcchHHHHHhhcCC--CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhC-C--CC
Q psy11589        162 ALWGSLNVHSYSHTN--TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHT-T--DR  234 (262)
Q Consensus       162 ~~~~~l~~H~~~h~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~--~~  234 (262)
                      ...++|..|++.-+.  +||+|+.|++.|.+.+.|.+|+. +|+ +..|+|..  |.++|.+..+|.+|++.++ |  +-
T Consensus       274 ~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~  351 (467)
T KOG3608|consen  274 SSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPI  351 (467)
T ss_pred             CChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-hcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCC
Confidence            999999999987554  89999999999999999999999 898 67899988  9999999999999998655 4  45


Q ss_pred             CccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      +|.|..|++.|++-.+|.+|+...++
T Consensus       352 ~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  352 LYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             ceeeecchhhhccchhHHHHHHHhhc
Confidence            69999999999999999999865443

>KOG2462|consensus

Probab=99.95  E-value=9e-29  Score=186.40  Aligned_cols=133  Identities=32%  Similarity=0.662  Sum_probs=121.1

Q ss_pred             CeeecCcchhhccChhHHHHHHHHhhc---CCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHH
Q psy11589         93 KEYCCHICKKVFLRNRNLVCHIKAVHE---NVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNV  169 (262)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~~h~---~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  169 (262)
                      ..|+|+.|++.+.+..+|.+| +..|-   ..+.+.|++|++++.+...|..|+++|.  -+.+|.+|||.|...+.|..
T Consensus       129 ~r~~c~eCgk~ysT~snLsrH-kQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRH-KQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             Cceeccccccccccccccchh-hcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            458999999999999999999 55663   3567999999999999999999999997  57999999999999999999


Q ss_pred             HHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHh
Q psy11589        170 HSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAV  229 (262)
Q Consensus       170 H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  229 (262)
                      |+++|+| +||.|+.|++.|.++++|+.||+ .|.+.++|+|+.|++.|..++.|..|...
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ-THSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHH-hhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999 89999999999999999999999 79999999999999999999999999754

>KOG1074|consensus

Probab=99.94  E-value=5.2e-28  Score=205.47  Aligned_cols=166  Identities=29%  Similarity=0.631  Sum_probs=146.0

Q ss_pred             eeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCC----ccccC---cccccccCcch
Q psy11589         94 EYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEK----KYVCE---TCGASFALWGS  166 (262)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~C~---~C~~~f~~~~~  166 (262)
                      |-.|-+|-++...++.|+.| .+.|+||+||+|.+|++.|.++.+|+.|+.+|....    ++.|+   +|.+.|...-.
T Consensus       605 PNqCiiC~rVlSC~saLqmH-yrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMH-YRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             ccceeeeeecccchhhhhhh-hhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            47899999999999999999 568999999999999999999999999999987553    48899   99999999999


Q ss_pred             HHHHHhhcCCC--------------cccCCcchhcCCCChHHHHHHHhhcCCC---------------------------
Q psy11589        167 LNVHSYSHTNT--------------QFVCSYCGNTYKNPKALTSHIRNSHTIH---------------------------  205 (262)
Q Consensus       167 l~~H~~~h~~~--------------~~~C~~C~~~f~~~~~l~~H~~~~H~~~---------------------------  205 (262)
                      |..|+++|.+.              .-.|..|.+.|.....+..++. .|.+.                           
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~s-e~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~  762 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQIS-EQPSPESEPDEQMDERTETEELDVTPPPPENS  762 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhh-ccCCcccCCcccccccccccccccCCCccccc
Confidence            99999999741              1468999999988888877765 23000                           


Q ss_pred             --------------------------------------------------------------------------------
Q psy11589        206 --------------------------------------------------------------------------------  205 (262)
Q Consensus       206 --------------------------------------------------------------------------------  205 (262)
                                                                                                      
T Consensus       763 ~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~  842 (958)
T KOG1074|consen  763 CGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLA  842 (958)
T ss_pred             cccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------------CcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHH
Q psy11589        206 -----------------------------------QKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKH  250 (262)
Q Consensus       206 -----------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  250 (262)
                                                         ....|.+||+.|.+.+.|..|+++|+++|||.|..|++.|..+.+
T Consensus       843 t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgn  922 (958)
T KOG1074|consen  843 TKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGN  922 (958)
T ss_pred             cccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhh
Confidence                                               016799999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccC
Q psy11589        251 LRQHYKVHLKM  261 (262)
Q Consensus       251 L~~H~~~H~~~  261 (262)
                      |+.||.+|+..
T Consensus       923 LKvHMgtH~w~  933 (958)
T KOG1074|consen  923 LKVHMGTHMWV  933 (958)
T ss_pred             hhhhhcccccc
Confidence            99999999854

>KOG3623|consensus

Probab=99.94  E-value=2.4e-27  Score=198.58  Aligned_cols=77  Identities=27%  Similarity=0.674  Sum_probs=75.0

Q ss_pred             ccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHH
Q psy11589        179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       179 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      |.|+.|++.|...+.|.+|.- .|+|.+||+|.+|.+.|..+..|..|+|.|.|||||+|+.|++.|+...+...||-
T Consensus       895 yaCDqCDK~FqKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            899999999999999999988 89999999999999999999999999999999999999999999999999999983

>KOG3608|consensus

Probab=99.93  E-value=1e-25  Score=174.53  Aligned_cols=190  Identities=26%  Similarity=0.515  Sum_probs=171.7

Q ss_pred             eec--CCCcccccchhHHHhhhhhcCC------------C-CeeecCc--chhhccChhHHHHHHHHhhcCCCcccCccc
Q psy11589         67 YKC--PDCSVIVVSYSGFKSHLDIHNV------------E-KEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVC  129 (262)
Q Consensus        67 ~~C--~~C~~~f~~~~~l~~H~~~h~~------------~-~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C  129 (262)
                      |.|  ..|+..|.+...|..|+..|..            + ..+.|.+  |...+.++..|+.| .+.|++++...|+.|
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH-~r~Hs~eKvvACp~C  213 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREH-IRTHSNEKVVACPHC  213 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHH-HHhcCCCeEEecchH
Confidence            555  7899999999999999877742            2 1256765  99999999999999 568999999999999


Q ss_pred             cccccCchhHHhHHhhh--CCCCccccCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCc
Q psy11589        130 GKAFADITNMKVHMRIH--TGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQK  207 (262)
Q Consensus       130 ~~~f~~~~~l~~H~~~h--~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  207 (262)
                      +..|.+...|-.|++..  ....+|.|..|.+.|.+...|..|+..|. .-|+|+.|+.+...+++|..|++..|..++|
T Consensus       214 g~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv-n~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  214 GELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV-NCYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             HHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh-hcccccccccCCCChHHHHHHHHhhhccCCC
Confidence            99999999999997654  35678999999999999999999999987 4799999999999999999999999999999


Q ss_pred             ccccccccccCChHHHHHHHHhhCCCCCccCCC--CCcccCChHHHHHHHHhhc
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM--CPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~  259 (262)
                      |+|+.|++.|.+.++|..|..+|+ +-.|.|..  |.+++.+...|++|++-++
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999998 77799988  9999999999999998765

>KOG3623|consensus

Probab=99.86  E-value=2e-22  Score=169.31  Aligned_cols=106  Identities=32%  Similarity=0.681  Sum_probs=93.5

Q ss_pred             eecCCCcccccchhHHHhhhhhcC--CCCeeecCcchhhccChhHHHHHHHHhhcC-------------CCcccCccccc
Q psy11589         67 YKCPDCSVIVVSYSGFKSHLDIHN--VEKEYCCHICKKVFLRNRNLVCHIKAVHEN-------------VREHQCSVCGK  131 (262)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-------------~~~~~C~~C~~  131 (262)
                      ..|+.|+..+....+|..|++.-+  .+..|.|.+|.++|..+..|.+||. .|..             .+.|+|..|++
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~-~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQ-LHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHH-hhcCCCcccccccchhhhccccccccch
Confidence            689999999999999999987533  3445999999999999999999965 4532             25699999999


Q ss_pred             cccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhh
Q psy11589        132 AFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYS  173 (262)
Q Consensus       132 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  173 (262)
                      .|+.+-.|+.|+++|.|++||.|+.|+|.|....++..|+..
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            999999999999999999999999999999999999999653

>KOG3576|consensus

Probab=99.75  E-value=3.4e-19  Score=128.33  Aligned_cols=111  Identities=27%  Similarity=0.590  Sum_probs=86.5

Q ss_pred             CCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHH
Q psy11589        149 EKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHM  227 (262)
Q Consensus       149 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  227 (262)
                      ...|.|.+|++.|.....|.+|++-|.+ +.+-|..||+.|.+.-.|++|++ .|++.+||+|..|+++|.++-.|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHH
Confidence            4457788888888888888888888777 67788888888888888888888 688888888888888888888888886


Q ss_pred             HhhCC-----------CCCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        228 AVHTT-----------DRPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       228 ~~h~~-----------~~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      +.-+|           +|.|.|..||++-.....+..|++.|+.
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            54332           3678888888888888888888877754

>KOG3576|consensus

Probab=99.72  E-value=1.5e-18  Score=125.01  Aligned_cols=83  Identities=35%  Similarity=0.680  Sum_probs=50.5

Q ss_pred             CeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHh
Q psy11589         93 KEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSY  172 (262)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  172 (262)
                      ..|.|.+|++.|.....|.+| ..-|...+.+.|..||+.|.....|.+|+++|+|.+||+|..|++.|+.+-+|..|++
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh-~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRH-LKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHH-hhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            346666666666666666666 3355555566666666666666666666666666666666666666666666666655


Q ss_pred             hcCC
Q psy11589        173 SHTN  176 (262)
Q Consensus       173 ~h~~  176 (262)
                      ..++
T Consensus       195 kvhg  198 (267)
T KOG3576|consen  195 KVHG  198 (267)
T ss_pred             HHcC
Confidence            4443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.39  E-value=1.1e-12  Score=111.58  Aligned_cols=144  Identities=24%  Similarity=0.490  Sum_probs=111.1

Q ss_pred             eeecCcchhhccChhHHHHHHHHhhcCCCcccCcc--ccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHH
Q psy11589         94 EYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHS  171 (262)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  171 (262)
                      .-.|+.|..... ...|..|. . +-.-....|+.  |+..|. ...+..|         +.|+.|++.|. ...|..|+
T Consensus       407 ~V~C~NC~~~i~-l~~l~lHe-~-~C~r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        407 TVECRNCKHYIP-SRSIALHE-A-YCSRHNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             eEECCCCCCccc-hhHHHHHH-h-hCCCcceeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHH
Confidence            357999887655 44566773 2 22223457874  999884 3334444         58999999996 67899999


Q ss_pred             hhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccC----------ChHHHHHHHHhhCCCCCccCCCC
Q psy11589        172 YSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFR----------MKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       172 ~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      ..++ .++.|+ |++.+ ....|..|+. .|.+.+++.|+.|++.|.          ..+.|..|..+. |.+++.|..|
T Consensus       473 ~~~H-kpv~Cp-Cg~~~-~R~~L~~H~~-thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~C  547 (567)
T PLN03086        473 KVFH-EPLQCP-CGVVL-EKEQMVQHQA-STCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSC  547 (567)
T ss_pred             HhcC-CCccCC-CCCCc-chhHHHhhhh-ccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEcccc
Confidence            9986 899999 99755 6789999988 799999999999999995          245899999885 9999999999


Q ss_pred             CcccCChHHHHHHHHh
Q psy11589        242 PSTFKLKKHLRQHYKV  257 (262)
Q Consensus       242 ~~~f~~~~~L~~H~~~  257 (262)
                      |+.+.. ..|..|+..
T Consensus       548 gk~Vrl-rdm~~H~~~  562 (567)
T PLN03086        548 GRSVML-KEMDIHQIA  562 (567)
T ss_pred             CCeeee-hhHHHHHHH
Confidence            988765 567788754

>PHA00733 hypothetical protein

Probab=99.38  E-value=7e-13  Score=92.40  Aligned_cols=82  Identities=17%  Similarity=0.327  Sum_probs=62.2

Q ss_pred             CcccCCcchhcCCCChHHHHH--HH--hhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHH
Q psy11589        177 TQFVCSYCGNTYKNPKALTSH--IR--NSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR  252 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H--~~--~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  252 (262)
                      +++.|.+|...|.....|..+  +.  ..+.+.+||.|+.||+.|.+...|..|++.|  +.+|.|+.|++.|.....|.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHH
Confidence            566777777666666555544  11  1234578899999999999999999998876  45789999999999999999


Q ss_pred             HHHHhhcc
Q psy11589        253 QHYKVHLK  260 (262)
Q Consensus       253 ~H~~~H~~  260 (262)
                      .|++..++
T Consensus       117 ~H~~~~h~  124 (128)
T PHA00733        117 DHVCKKHN  124 (128)
T ss_pred             HHHHHhcC
Confidence            99877665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.26  E-value=2.4e-11  Score=103.48  Aligned_cols=146  Identities=20%  Similarity=0.403  Sum_probs=107.0

Q ss_pred             eecccCCCCCceeeehHHHHHHHhhhccCCccCccccccccccccccccccCCCccceecC--CCcccccchhHHHhhhh
Q psy11589         10 FVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKVSYKCP--DCSVIVVSYSGFKSHLD   87 (262)
Q Consensus        10 ~~C~~C~~~~~~~~~~~~~l~~H~~~~~~~~~~~~~l~~~~~~~~~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~   87 (262)
                      -.|+.|..     ......|..|.....                          -..-.|+  .|+..|. +..+..|  
T Consensus       408 V~C~NC~~-----~i~l~~l~lHe~~C~--------------------------r~~V~Cp~~~Cg~v~~-r~el~~H--  453 (567)
T PLN03086        408 VECRNCKH-----YIPSRSIALHEAYCS--------------------------RHNVVCPHDGCGIVLR-VEEAKNH--  453 (567)
T ss_pred             EECCCCCC-----ccchhHHHHHHhhCC--------------------------CcceeCCcccccceee-ccccccC--
Confidence            46999987     344566778865431                          0113577  4888883 3333444  


Q ss_pred             hcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccccC----
Q psy11589         88 IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFAL----  163 (262)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----  163 (262)
                             +.|+.|++.|. ...|..|+...|   .++.|+ |++.+ ....|..|+.+|.+++++.|+.|++.+..    
T Consensus       454 -------~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~  520 (567)
T PLN03086        454 -------VHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSA  520 (567)
T ss_pred             -------ccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccc
Confidence                   58999999885 678999966543   778999 99755 56889999999999999999999998852    


Q ss_pred             ------cchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcC
Q psy11589        164 ------WGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHT  203 (262)
Q Consensus       164 ------~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  203 (262)
                            ...|..|......+++.|..||+.+... .|..|+...|.
T Consensus       521 ~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        521 MDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             cchhhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence                  3478899988866899999999888765 57778766664

>PHA00733 hypothetical protein

Probab=99.24  E-value=8.5e-12  Score=86.98  Aligned_cols=81  Identities=23%  Similarity=0.423  Sum_probs=55.0

Q ss_pred             CCccccCcccccccCcchHHH------HHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHH
Q psy11589        149 EKKYVCETCGASFALWGSLNV------HSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQ  222 (262)
Q Consensus       149 ~~~~~C~~C~~~f~~~~~l~~------H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~  222 (262)
                      .+++.|.+|...|.....|..      |+..+..+||.|+.|++.|.+...|..|++ .|  +.+|.|++|++.|.....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r-~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIR-YT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHh-cC--CcCccCCCCCCccCCHHH
Confidence            344555555555544444333      334444578888888888888888888887 44  356888888888888888


Q ss_pred             HHHHHHhhCC
Q psy11589        223 LKEHMAVHTT  232 (262)
Q Consensus       223 l~~H~~~h~~  232 (262)
                      |..|+...++
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            8888876554

>PHA02768 hypothetical protein; Provisional

Probab=99.19  E-value=9.8e-12  Score=71.34  Aligned_cols=44  Identities=14%  Similarity=0.317  Sum_probs=37.6

Q ss_pred             cccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHH
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR  252 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  252 (262)
                      .|.|+.||+.|...+.|..|+++|+  +||+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4789999999999999999999988  6889999999988877663

>KOG3993|consensus

Probab=99.04  E-value=2.4e-11  Score=97.39  Aligned_cols=163  Identities=19%  Similarity=0.336  Sum_probs=95.4

Q ss_pred             eeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccc---cCcccccccCcchHHHH
Q psy11589         94 EYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYV---CETCGASFALWGSLNVH  170 (262)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~---C~~C~~~f~~~~~l~~H  170 (262)
                      .|.|.+|...|.+.-.|.+| +---.-...|.|+.|+++|.-..+|..|.+.|.....-.   -+-=.+...+....+.-
T Consensus       267 dyiCqLCK~kYeD~F~LAQH-rC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQH-RCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhc-cCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            48899999999999999988 432223345899999999999999999988874321000   00000000000000000


Q ss_pred             Hhh---cCCCcccCCcchhcCCCChHHHHHHHhhcCC-------------------------------------------
Q psy11589        171 SYS---HTNTQFVCSYCGNTYKNPKALTSHIRNSHTI-------------------------------------------  204 (262)
Q Consensus       171 ~~~---h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-------------------------------------------  204 (262)
                      .+.   .....|.|..|++.|.....|+.|+.+.|..                                           
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence            000   0012455666666666666666664422211                                           


Q ss_pred             --CCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHh
Q psy11589        205 --HQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       205 --~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                        .....|+.|+-.+.++..-..+.+.-..+..|.|.+|.-.|.+..+|.+|+..
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence              01134666666666665544554444445669999999999999999999853

>KOG3993|consensus

Probab=99.04  E-value=2.7e-11  Score=97.11  Aligned_cols=162  Identities=20%  Similarity=0.255  Sum_probs=107.9

Q ss_pred             ceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcC-------------------------
Q psy11589         66 SYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHEN-------------------------  120 (262)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-------------------------  120 (262)
                      .|.|..|...|.+...|..|.-.-.....|+|+.|++.|....+|..| +++|..                         
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASH-RRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASH-RRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhh-hcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            489999999999999999997654444679999999999999999999 888842                         


Q ss_pred             --------CCcccCccccccccCchhHHhHHhhhCCCCc-----------------cccCcccccccCcchHHHHHhhcC
Q psy11589        121 --------VREHQCSVCGKAFADITNMKVHMRIHTGEKK-----------------YVCETCGASFALWGSLNVHSYSHT  175 (262)
Q Consensus       121 --------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-----------------~~C~~C~~~f~~~~~l~~H~~~h~  175 (262)
                              +..|.|.+|++.|.....|+.|+.+|+....                 +.|..+.-.+.....-..+...+.
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence                    1137777787777777777777766653211                 223333333332222112222222


Q ss_pred             C--CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHh
Q psy11589        176 N--TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAV  229 (262)
Q Consensus       176 ~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  229 (262)
                      +  ....|++|+-.+.++..--.+.+ .-..+.-|.|.+|.-.|.+...|.+|+..
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~r-lg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGR-LGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCcccc-ccchhhccccccchHhhhcCcchHhHhhh
Confidence            1  12457777766666654433433 22334568899999999999999998764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.98  E-value=3e-10  Score=55.86  Aligned_cols=26  Identities=35%  Similarity=0.862  Sum_probs=20.5

Q ss_pred             HHHHHHHhhCCCCCccCCCCCcccCC
Q psy11589        222 QLKEHMAVHTTDRPFVCNMCPSTFKL  247 (262)
Q Consensus       222 ~l~~H~~~h~~~~~~~C~~C~~~f~~  247 (262)
                      +|.+|+++|+|++||+|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888888888888888763

...

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=5.2e-10  Score=64.28  Aligned_cols=42  Identities=21%  Similarity=0.512  Sum_probs=28.3

Q ss_pred             ccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy11589        179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQL  223 (262)
Q Consensus       179 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  223 (262)
                      |.|+.||+.|...+.|..|++ .|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r-~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLR-KHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHH-hcC--CcccCCcccceeccccee
Confidence            567777777777777777776 465  566777777777665554

>PHA00616 hypothetical protein

Probab=98.79  E-value=2.4e-09  Score=58.48  Aligned_cols=34  Identities=24%  Similarity=0.413  Sum_probs=29.0

Q ss_pred             cccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      ||+|+.||+.|..+++|..|++.|+|++|+.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5888888888888888888888888888888764

>PHA00732 hypothetical protein

Probab=98.69  E-value=1.3e-08  Score=64.34  Aligned_cols=48  Identities=38%  Similarity=0.687  Sum_probs=27.8

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhC
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      ||.|+.|++.|.+.+.|..|++..|.   ++.|+.||+.|.   .|..|+....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            35666666666666666666652243   245666666665   3555655443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.65  E-value=1.6e-08  Score=49.67  Aligned_cols=26  Identities=38%  Similarity=0.706  Sum_probs=23.0

Q ss_pred             HHHHHHHhhcCCCCcccccccccccCC
Q psy11589        193 ALTSHIRNSHTIHQKSICDVCGKEFRM  219 (262)
Q Consensus       193 ~l~~H~~~~H~~~~~~~C~~C~~~f~~  219 (262)
                      +|.+|++ .|++++||.|++|++.|.+
T Consensus         1 ~l~~H~~-~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMR-THTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHH-HHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhh-hcCCCCCCCCCCCcCeeCc
Confidence            4889999 7999999999999999864

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.53  E-value=1.2e-07  Score=55.69  Aligned_cols=49  Identities=29%  Similarity=0.541  Sum_probs=23.0

Q ss_pred             ccccccccccCChHHHHHHHHh-hCCC-CCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAV-HTTD-RPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      |.||.|++ -.+...|..|... |.++ +.+.||+|...+.  .+|..||..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45555555 2334455555432 3322 3455555554433  35555555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.49  E-value=6e-08  Score=53.02  Aligned_cols=28  Identities=25%  Similarity=0.421  Sum_probs=26.6

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ||+|+.||+.|.++++|..|++.|+|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~   28 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQN   28 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999974

>PHA00732 hypothetical protein

Probab=98.48  E-value=9.1e-08  Score=60.52  Aligned_cols=45  Identities=29%  Similarity=0.546  Sum_probs=24.7

Q ss_pred             cccccccccccCChHHHHHHHHh-hCCCCCccCCCCCcccCChHHHHHHHHh
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAV-HTTDRPFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      ||.|+.||+.|.+.+.|..|++. |.   ++.|+.||+.|.   .|..|+++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            35566666666666666666553 33   235666666665   35555543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.39  E-value=6.7e-07  Score=52.56  Aligned_cols=52  Identities=23%  Similarity=0.628  Sum_probs=43.4

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCC-CcccccccccccCChHHHHHHHHhhCC
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIH-QKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      .|.||+|++ ..+...|..|+...|..+ +.+.||+|...+.  .+|..|+.++++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 566789999999889875 5799999998755  489999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.32  E-value=3.3e-07  Score=43.69  Aligned_cols=23  Identities=30%  Similarity=0.843  Sum_probs=14.4

Q ss_pred             ccCCCCCcccCChHHHHHHHHhh
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.23  E-value=6.8e-07  Score=60.08  Aligned_cols=71  Identities=25%  Similarity=0.440  Sum_probs=13.3

Q ss_pred             cCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHh
Q psy11589        154 CETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAV  229 (262)
Q Consensus       154 C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  229 (262)
                      |..|+..|.+...|..|+...++....   ....+.....+..+++  ......+.|..|++.|.+...|..||+.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~--~~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLR--KKVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             ----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc---cccccccccccccccc--cccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            555555555555555555544431111   1111223333333332  1111245566666666666666666554

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.16  E-value=1.3e-06  Score=41.58  Aligned_cols=23  Identities=48%  Similarity=0.895  Sum_probs=16.7

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      |.|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.07  E-value=3e-06  Score=40.70  Aligned_cols=23  Identities=43%  Similarity=0.974  Sum_probs=13.6

Q ss_pred             ccCCCCCcccCChHHHHHHHHhh
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666655

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.02  E-value=2.1e-06  Score=42.61  Aligned_cols=25  Identities=40%  Similarity=0.794  Sum_probs=15.8

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhc
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      ||+|+.|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666666554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.90  E-value=7.5e-06  Score=54.96  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=14.8

Q ss_pred             ecccCCCCCceeeehHHHHHHHhhhccCCc-cCccccccccccccccccccCCCccceecCCCcccccchhHHHhhhhh
Q psy11589         11 VCNLCPPGSKVVVKYVHYLERHVRKHHTMF-LRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDI   88 (262)
Q Consensus        11 ~C~~C~~~~~~~~~~~~~l~~H~~~~~~~~-~~~~~l~~~~~~~~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   88 (262)
                      +|..|+.    .|.+...|..||...|+.. .....+....+ . ...... .-...+.|..|++.|.+...|..||+.
T Consensus         1 ~C~~C~~----~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~-~-~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDE----SFSSVDDLLQHMKKKHGFDIPDQKYLVDPNR-L-LNYLRK-KVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Ccccccc----ccccccccccccccccccccccccccccccc-c-cccccc-ccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            5999999    9999999999998877521 11111100000 0 011110 011146666666666666666666664

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.88  E-value=1e-05  Score=38.77  Aligned_cols=23  Identities=48%  Similarity=1.011  Sum_probs=15.5

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      |.|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56777777777777777777765

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.80  E-value=1.3e-05  Score=39.72  Aligned_cols=26  Identities=38%  Similarity=0.675  Sum_probs=20.1

Q ss_pred             cccccccccccCChHHHHHHHHhhCC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      ||.|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57788888888888888888877643

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.67  E-value=3.4e-05  Score=43.13  Aligned_cols=34  Identities=26%  Similarity=0.675  Sum_probs=17.1

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhCCCCC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP  235 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  235 (262)
                      ...+.|-.|++|+..+.+..+|.+|+.+.++.||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3445566666666666666666666666555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.63  E-value=1.4e-05  Score=62.54  Aligned_cols=70  Identities=21%  Similarity=0.491  Sum_probs=44.6

Q ss_pred             CCcccCCc--chhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHH
Q psy11589        176 NTQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQ  253 (262)
Q Consensus       176 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  253 (262)
                      ++||+|++  |.+.+.....|+.|+...|...+-..=+       ..   ..|.---...|||.|++|++.|.+...|+-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p-------~p---~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP-------SP---EKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC-------Cc---cccccccccCCceeccccchhhccCcccee
Confidence            47899987  9999999999999987445322211111       00   001111234578888888888888888877


Q ss_pred             HH
Q psy11589        254 HY  255 (262)
Q Consensus       254 H~  255 (262)
                      |.
T Consensus       417 Hr  418 (423)
T COG5189         417 HR  418 (423)
T ss_pred             cc
Confidence            73

>smart00355 ZnF_C2H2 zinc finger

Probab=97.60  E-value=6.8e-05  Score=36.43  Aligned_cols=24  Identities=33%  Similarity=0.761  Sum_probs=14.7

Q ss_pred             ccCCCCCcccCChHHHHHHHHhhc
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      |+|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            456666666666666666666553

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.59  E-value=5e-05  Score=36.37  Aligned_cols=24  Identities=29%  Similarity=0.632  Sum_probs=15.8

Q ss_pred             ccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      |+|+.|++... ...|..|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777777776 7777777777653

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.44  E-value=0.00014  Score=40.78  Aligned_cols=38  Identities=16%  Similarity=0.481  Sum_probs=24.6

Q ss_pred             HHHHh-hCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        225 EHMAV-HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       225 ~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .+.+. ...+.|-.|++|+..+.+..+|++|++++++.+
T Consensus        13 ~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   13 KKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             ---CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             hHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            34433 345789999999999999999999998877754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.37  E-value=0.00019  Score=34.74  Aligned_cols=24  Identities=50%  Similarity=0.805  Sum_probs=16.4

Q ss_pred             ccccccccccCChHHHHHHHHhhC
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      |.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            457777777777777777776553

>PRK04860 hypothetical protein; Provisional

Probab=97.21  E-value=0.00015  Score=52.63  Aligned_cols=40  Identities=20%  Similarity=0.442  Sum_probs=30.8

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChH
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKK  249 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  249 (262)
                      -+|.|. |+.   ....+.+|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            368887 886   5566778888888888888888888876543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.17  E-value=0.00018  Score=56.60  Aligned_cols=69  Identities=20%  Similarity=0.321  Sum_probs=40.8

Q ss_pred             CCCceeccc--CCCCCceeeehHHHHHHHhhhccCC--ccCccccccccccccccccccCCCccceecCCCcccccchhH
Q psy11589          6 ENSDFVCNL--CPPGSKVVVKYVHYLERHVRKHHTM--FLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYSG   81 (262)
Q Consensus         6 ~~~~~~C~~--C~~~~~~~~~~~~~l~~H~~~~~~~--~~~~~~l~~~~~~~~~~h~~~~~~~~~~~C~~C~~~f~~~~~   81 (262)
                      +++||+|++  |++    .+.+...|..|+.--|..  ....+.-        ..+.-.....+||.|++|++.+++...
T Consensus       346 d~KpykCpV~gC~K----~YknqnGLKYH~lhGH~~~~~~~~p~p--------~~~~~F~~~~KPYrCevC~KRYKNlNG  413 (423)
T COG5189         346 DGKPYKCPVEGCNK----KYKNQNGLKYHMLHGHQNQKLHENPSP--------EKMNIFSAKDKPYRCEVCDKRYKNLNG  413 (423)
T ss_pred             cCceecCCCCCchh----hhccccchhhhhhccccCcccCCCCCc--------cccccccccCCceeccccchhhccCcc
Confidence            359999997  999    999999999998743310  0000000        111111223456666666666666666


Q ss_pred             HHhhh
Q psy11589         82 FKSHL   86 (262)
Q Consensus        82 l~~H~   86 (262)
                      |.-|.
T Consensus       414 LKYHr  418 (423)
T COG5189         414 LKYHR  418 (423)
T ss_pred             ceecc
Confidence            66554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.16  E-value=0.00019  Score=34.65  Aligned_cols=23  Identities=35%  Similarity=0.881  Sum_probs=14.1

Q ss_pred             ccCCCCCcccCChHHHHHHHHhh
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45666666666666666666543

>KOG1146|consensus

Probab=97.02  E-value=8.3e-05  Score=68.91  Aligned_cols=100  Identities=18%  Similarity=0.307  Sum_probs=55.0

Q ss_pred             cCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHH-HHhhcC
Q psy11589         97 CHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNV-HSYSHT  175 (262)
Q Consensus        97 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~-H~~~h~  175 (262)
                      |.-|+..+.....+..++...+...+.++|+.|+..++....|..|++.-+.+-.-  ..|.. +.....+.+ -.....
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~-gq~~~~~arg~~~~~~  515 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKA-GQNHPRLARGEVYRCP  515 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhHh-ccccccccccccccCC
Confidence            44556666666666666666666667788888888888888888887763322110  11110 000000000 111122


Q ss_pred             CCcccCCcchhcCCCChHHHHHHH
Q psy11589        176 NTQFVCSYCGNTYKNPKALTSHIR  199 (262)
Q Consensus       176 ~~~~~C~~C~~~f~~~~~l~~H~~  199 (262)
                      +++|.|..|...+.....|.+|+.
T Consensus       516 ~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHH
Confidence            256666666666666666666654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.01  E-value=0.00067  Score=32.34  Aligned_cols=24  Identities=29%  Similarity=0.721  Sum_probs=19.0

Q ss_pred             eecccCCCCCceeeehHHHHHHHhhhccC
Q psy11589         10 FVCNLCPPGSKVVVKYVHYLERHVRKHHT   38 (262)
Q Consensus        10 ~~C~~C~~~~~~~~~~~~~l~~H~~~~~~   38 (262)
                      |+|+.|++    ... ...|..|++.+|+
T Consensus         1 y~C~~C~y----~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSY----STS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-----EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCC----cCC-HHHHHHHHHhhCc
Confidence            78999999    777 8899999998763

>KOG2231|consensus

Probab=96.99  E-value=0.0022  Score=56.52  Aligned_cols=100  Identities=24%  Similarity=0.508  Sum_probs=58.1

Q ss_pred             ecCcchhhccChhHHHHHHHHhhcCCCcccCccccc---------cccCchhHHhHHhhhCC-CC----ccccCcccccc
Q psy11589         96 CCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGK---------AFADITNMKVHMRIHTG-EK----KYVCETCGASF  161 (262)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~---------~f~~~~~l~~H~~~h~~-~~----~~~C~~C~~~f  161 (262)
                      .|..| ..|.+...|..|+...|..   +.|.+|-.         ...+...|..|++.--. +.    --.|..|...|
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f  192 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERF  192 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhh
Confidence            46666 5566778888887777743   44444422         22344566666654222 11    13477777777


Q ss_pred             cCcchHHHHHhhcCCCcccCCcc------hhcCCCChHHHHHHHhhc
Q psy11589        162 ALWGSLNVHSYSHTNTQFVCSYC------GNTYKNPKALTSHIRNSH  202 (262)
Q Consensus       162 ~~~~~l~~H~~~h~~~~~~C~~C------~~~f~~~~~l~~H~~~~H  202 (262)
                      .....|..|++..+.   .|..|      +..|..-..|..|.+..|
T Consensus       193 ld~~el~rH~~~~h~---~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  193 LDDDELYRHLRFDHE---FCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             ccHHHHHHhhcccee---heeecCcccccchhcccchHHHHHhhhcC
Confidence            777777777776553   33333      345666677777766433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.96  E-value=0.00049  Score=33.15  Aligned_cols=23  Identities=30%  Similarity=0.788  Sum_probs=17.1

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56778888888888888887643

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.72  E-value=0.0027  Score=50.77  Aligned_cols=118  Identities=22%  Similarity=0.459  Sum_probs=70.4

Q ss_pred             ceeccc--CCCCCceeeehHHHHHHHhhhccCC------------cc------CccccccccccccccccccCCCccce-
Q psy11589          9 DFVCNL--CPPGSKVVVKYVHYLERHVRKHHTM------------FL------RLPKVHSHFRKKNAIHVNNINKKVSY-   67 (262)
Q Consensus         9 ~~~C~~--C~~~~~~~~~~~~~l~~H~~~~~~~------------~~------~~~~l~~~~~~~~~~h~~~~~~~~~~-   67 (262)
                      .|.|+.  |..    +...+..|..|.+..|+.            |.      +...|        ..|...-..+..| 
T Consensus       151 ~F~CP~skc~~----~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~L--------r~H~~~G~~e~GFK  218 (493)
T COG5236         151 SFKCPKSKCHR----RCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTL--------RDHKNGGLEEEGFK  218 (493)
T ss_pred             HhcCCchhhhh----hhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccc--------cccccCCccccCcC
Confidence            367774  666    677788899999887761            21      22222        2233222222223 


Q ss_pred             ---ecCCCcccccchhHHHhhhhhcCCCCeeecCcchh-------hccChhHHHHHHHHhhcCCCcccCcc--cc----c
Q psy11589         68 ---KCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKK-------VFLRNRNLVCHIKAVHENVREHQCSV--CG----K  131 (262)
Q Consensus        68 ---~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~h~~~~~~~C~~--C~----~  131 (262)
                         .|.+|...|.+...|..|++..+.    .|-+|+.       -|.+..+|..|.+..|     |.|..  |.    .
T Consensus       219 GHP~C~FC~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~qtc~~~k~~  289 (493)
T COG5236         219 GHPLCIFCKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTFQTCRVGKCY  289 (493)
T ss_pred             CCchhhhccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc-----eEEEEEEEecCcEE
Confidence               478888888888888888776543    3555553       3566677777766544     55532  32    3


Q ss_pred             cccCchhHHhHHhhhC
Q psy11589        132 AFADITNMKVHMRIHT  147 (262)
Q Consensus       132 ~f~~~~~l~~H~~~h~  147 (262)
                      +|+....|..|+..-+
T Consensus       290 vf~~~~el~~h~~~~h  305 (493)
T COG5236         290 VFPYHTELLEHLTRFH  305 (493)
T ss_pred             EeccHHHHHHHHHHHh
Confidence            5777777777765433

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.64  E-value=0.00046  Score=34.01  Aligned_cols=22  Identities=36%  Similarity=0.810  Sum_probs=13.7

Q ss_pred             ccCCCCCcccCChHHHHHHHHh
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=96.51  E-value=0.0062  Score=53.74  Aligned_cols=47  Identities=26%  Similarity=0.644  Sum_probs=22.8

Q ss_pred             ecCcchhhccChhHHHHHHHHhhcCCCcccCcccc------ccccCchhHHhHHhhhC
Q psy11589         96 CCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCG------KAFADITNMKVHMRIHT  147 (262)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~------~~f~~~~~l~~H~~~h~  147 (262)
                      .|..|...|.....|..|+...|     |.|..|+      .-|.....|..|.+..|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            35555555555555555544333     3344332      23444455555555443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.29  E-value=0.0027  Score=31.22  Aligned_cols=22  Identities=23%  Similarity=0.523  Sum_probs=18.7

Q ss_pred             eecCCCcccccchhHHHhhhhh
Q psy11589         67 YKCPDCSVIVVSYSGFKSHLDI   88 (262)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~   88 (262)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788999999999999888875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=96.21  E-value=0.0019  Score=60.39  Aligned_cols=77  Identities=16%  Similarity=0.372  Sum_probs=61.9

Q ss_pred             CCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhC-------------------------CCCC
Q psy11589        181 CSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT-------------------------TDRP  235 (262)
Q Consensus       181 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~  235 (262)
                      |..|+..+.....+..|+...+...+-|.|+.|+..|.....|..||+.-+                         +.+|
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            344555566666666776667777788999999999999999999998722                         2268


Q ss_pred             ccCCCCCcccCChHHHHHHHHh
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      |.|..|.++++.+.+|.+|+..
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            9999999999999999999864

>KOG2482|consensus

Probab=96.21  E-value=0.0087  Score=47.88  Aligned_cols=52  Identities=29%  Similarity=0.528  Sum_probs=37.8

Q ss_pred             eeecCcchhhcc-ChhHHHHHHHHhhcC---------------------CCcccCccccccccCchhHHhHHhh
Q psy11589         94 EYCCHICKKVFL-RNRNLVCHIKAVHEN---------------------VREHQCSVCGKAFADITNMKVHMRI  145 (262)
Q Consensus        94 ~~~C~~C~~~f~-~~~~l~~H~~~~h~~---------------------~~~~~C~~C~~~f~~~~~l~~H~~~  145 (262)
                      ...|-.|...+. +++....|+-.+|.-                     -..+.|-.|.+.|..+..|+.||+.
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            467999987754 667777887666631                     1236888888888888888888864

>KOG2785|consensus

Probab=96.16  E-value=0.014  Score=47.61  Aligned_cols=51  Identities=22%  Similarity=0.380  Sum_probs=41.9

Q ss_pred             cccccccccccCChHHHHHHHHhhCCC-----------------------CCccCCCCC---cccCChHHHHHHHHh
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTD-----------------------RPFVCNMCP---STFKLKKHLRQHYKV  257 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~L~~H~~~  257 (262)
                      |-.|-.|++.+.+...-..||..++|-                       .-|.|-.|+   +.|.+-...+.||+.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            567888999888888888898877763                       237888888   999999999999964

>KOG2482|consensus

Probab=95.94  E-value=0.0044  Score=49.50  Aligned_cols=68  Identities=16%  Similarity=0.299  Sum_probs=41.9

Q ss_pred             CceecccCCCCCceeeehHHHHHHHhhhccCC-------ccCccccccccccccccccccCCCccceecCCCcccccchh
Q psy11589          8 SDFVCNLCPPGSKVVVKYVHYLERHVRKHHTM-------FLRLPKVHSHFRKKNAIHVNNINKKVSYKCPDCSVIVVSYS   80 (262)
Q Consensus         8 ~~~~C~~C~~~~~~~~~~~~~l~~H~~~~~~~-------~~~~~~l~~~~~~~~~~h~~~~~~~~~~~C~~C~~~f~~~~   80 (262)
                      ...+|-.|+..   .-.+++....|+-..|+-       ......+        ..|...  .-..+.|-.|.++|+++.
T Consensus       143 fslqClFCn~e---~lgnRs~~l~Hlf~~H~lniGlpDniVyvnel--------LehLke--kL~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  143 FSLQCLFCNNE---GLGNRSEILEHLFHVHGLNIGLPDNIVYVNEL--------LEHLKE--KLERLRCLYCEKIFRDKN  209 (423)
T ss_pred             eeeEEEEecch---hcccHHHHHHHHHHHhhhccCCCcceeeHHHH--------HHHHHH--HHhhheeeeeccccCCcH
Confidence            34679999872   336677788888655540       0111111        011110  012378999999999999


Q ss_pred             HHHhhhhh
Q psy11589         81 GFKSHLDI   88 (262)
Q Consensus        81 ~l~~H~~~   88 (262)
                      .|..||+.
T Consensus       210 tLkeHMrk  217 (423)
T KOG2482|consen  210 TLKEHMRK  217 (423)
T ss_pred             HHHHHHHh
Confidence            99999975

>KOG2785|consensus

Probab=95.92  E-value=0.018  Score=47.02  Aligned_cols=52  Identities=21%  Similarity=0.420  Sum_probs=39.3

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCCC----------------------cccccccc---cccCChHHHHHHHHh
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQ----------------------KSICDVCG---KEFRMKRQLKEHMAV  229 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~----------------------~~~C~~C~---~~f~~~~~l~~H~~~  229 (262)
                      |-.|..|+..+.+...-..||...|.---                      .+.|-.|.   +.|.+....+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            46788888888888888888875554222                      37788888   888888888889864

>PRK04860 hypothetical protein; Provisional

Probab=95.90  E-value=0.0043  Score=45.11  Aligned_cols=36  Identities=22%  Similarity=0.586  Sum_probs=17.8

Q ss_pred             eeecCcchhhccChhHHHHHHHHhhcCCCcccCcccccccc
Q psy11589         94 EYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFA  134 (262)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~  134 (262)
                      +|.|. |+.   ....+..| .++|.++++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH-~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRH-NRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHH-HHHhcCCccEECCCCCceeE
Confidence            35554 544   34444555 34455555555555555443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.85  E-value=0.0087  Score=28.75  Aligned_cols=19  Identities=32%  Similarity=0.667  Sum_probs=11.3

Q ss_pred             cCCCCCcccCChHHHHHHHH
Q psy11589        237 VCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       237 ~C~~C~~~f~~~~~L~~H~~  256 (262)
                      .|+.||+.| ..+.|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            566666666 5555666654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.62  E-value=0.022  Score=45.74  Aligned_cols=128  Identities=25%  Similarity=0.384  Sum_probs=81.6

Q ss_pred             eecCc--chhhccChhHHHHHHHHhhcCCCcccCcccc---cccc------CchhHHhHHhhhCCCCc----cccCcccc
Q psy11589         95 YCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCG---KAFA------DITNMKVHMRIHTGEKK----YVCETCGA  159 (262)
Q Consensus        95 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~~~----~~C~~C~~  159 (262)
                      |.|+.  |.........|..|.+..|..   +.|.+|-   +.|.      +...|+.|...-..+..    -.|..|..
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            67775  777777778888887766643   5566652   2332      34566777654333322    34888888


Q ss_pred             cccCcchHHHHHhhcCCCcccCCcc----hhcCCCChHHHHHHHhhcCCCCcccccc--cc----cccCChHHHHHHHHh
Q psy11589        160 SFALWGSLNVHSYSHTNTQFVCSYC----GNTYKNPKALTSHIRNSHTIHQKSICDV--CG----KEFRMKRQLKEHMAV  229 (262)
Q Consensus       160 ~f~~~~~l~~H~~~h~~~~~~C~~C----~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~----~~f~~~~~l~~H~~~  229 (262)
                      .|-...+|..|++..+++-+.|+.-    .+.|.+...|..|.+..|     |.|.+  |.    ..|.....|..|+..
T Consensus       229 ~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         229 YFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             eecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc-----eEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            8888888888888877654444332    234777788888877433     44443  22    357888888888754


Q ss_pred             h
Q psy11589        230 H  230 (262)
Q Consensus       230 h  230 (262)
                      -
T Consensus       304 ~  304 (493)
T COG5236         304 F  304 (493)
T ss_pred             H
Confidence            3

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.38  E-value=0.015  Score=27.93  Aligned_cols=19  Identities=32%  Similarity=0.854  Sum_probs=11.3

Q ss_pred             cccccccccCChHHHHHHHH
Q psy11589        209 ICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       209 ~C~~C~~~f~~~~~l~~H~~  228 (262)
                      .|+.||+.| ..+.|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            566666666 4455666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.15  E-value=0.015  Score=30.36  Aligned_cols=22  Identities=32%  Similarity=0.677  Sum_probs=16.5

Q ss_pred             CccCCCCCcccCChHHHHHHHH
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      +|.|++|+..|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5677888888877777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=95.08  E-value=0.013  Score=43.49  Aligned_cols=75  Identities=25%  Similarity=0.542  Sum_probs=48.6

Q ss_pred             cccCc--ccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhc---------CCCCcccccc--cccccC
Q psy11589        152 YVCET--CGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSH---------TIHQKSICDV--CGKEFR  218 (262)
Q Consensus       152 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H---------~~~~~~~C~~--C~~~f~  218 (262)
                      +.|++  |...|.+...+..|..+-++  -.|.+|.+.|.+...|..|+...|         .|..-|+|-+  |+..|.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFk  157 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFK  157 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhh
Confidence            56655  66667666666666655443  257777777777777777776444         2445567743  777777


Q ss_pred             ChHHHHHHHH
Q psy11589        219 MKRQLKEHMA  228 (262)
Q Consensus       219 ~~~~l~~H~~  228 (262)
                      +...-..|+-
T Consensus       158 T~r~RkdH~I  167 (253)
T KOG4173|consen  158 TSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhHHH
Confidence            7777777764

>KOG2893|consensus

Probab=95.04  E-value=0.0066  Score=46.05  Aligned_cols=41  Identities=27%  Similarity=0.621  Sum_probs=23.5

Q ss_pred             CCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHH
Q psy11589        181 CSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEH  226 (262)
Q Consensus       181 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  226 (262)
                      |-+|++.|.+...|+.|++.     +-|+|.+|-+..-+--.|..|
T Consensus        13 cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceee
Confidence            56666666666666666553     336666666655554455544

>KOG2893|consensus

Probab=94.68  E-value=0.01  Score=45.05  Aligned_cols=48  Identities=25%  Similarity=0.422  Sum_probs=38.6

Q ss_pred             ecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhc
Q psy11589         68 KCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHE  119 (262)
Q Consensus        68 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  119 (262)
                      .|.+|++.|.+..-|..|++..    -|+|-+|-+...+--.|..|-..+|.
T Consensus        12 wcwycnrefddekiliqhqkak----hfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehhhhhh
Confidence            5888999999888888888753    38888888888888888888766664

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.40  E-value=0.11  Score=35.08  Aligned_cols=48  Identities=19%  Similarity=0.439  Sum_probs=25.8

Q ss_pred             CCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhC
Q psy11589        181 CSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       181 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      |--|...|.......   ...-.....|+|+.|...|--.-++-.|..+|+
T Consensus        58 C~~C~~~f~~~~~~~---~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        58 CFGCQGPFPKPPVSP---FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ccCcCCCCCCccccc---ccccccccceeCCCCCCccccccchhhhhhccC
Confidence            666666666542111   000112345777777777776666666665553

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.20  E-value=0.027  Score=29.10  Aligned_cols=10  Identities=40%  Similarity=1.238  Sum_probs=5.2

Q ss_pred             CCccCCCCCc
Q psy11589        234 RPFVCNMCPS  243 (262)
Q Consensus       234 ~~~~C~~C~~  243 (262)
                      .+..|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455555553

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.01  E-value=0.013  Score=50.17  Aligned_cols=148  Identities=22%  Similarity=0.377  Sum_probs=81.1

Q ss_pred             eeecCcchhhccChhHHHHHHHH-hhcCC--CcccCc--cccccccCchhHHhHHhhhCCCCccccCc--ccccccCcch
Q psy11589         94 EYCCHICKKVFLRNRNLVCHIKA-VHENV--REHQCS--VCGKAFADITNMKVHMRIHTGEKKYVCET--CGASFALWGS  166 (262)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~  166 (262)
                      ++.|..|...|.....|..|... .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..  +...+.....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            35566666666666666666332 56666  666666  56666666666666666666555544433  2222221111


Q ss_pred             ------HHHHHhhcCCCcccCCc--chhcCCCChHHHHHHHhhcCCCC--cccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        167 ------LNVHSYSHTNTQFVCSY--CGNTYKNPKALTSHIRNSHTIHQ--KSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       167 ------l~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                            +...........+.+..  |...+.....+..|.. .|...+  .+.+..|.+.+.....+..|++.+....++
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHII-THLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccc-cccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence                  11111111112333322  5555555555555554 444433  466677888888888888888887777666


Q ss_pred             cCCCCC
Q psy11589        237 VCNMCP  242 (262)
Q Consensus       237 ~C~~C~  242 (262)
                      .|..++
T Consensus       448 ~~~~~~  453 (467)
T COG5048         448 LCSILK  453 (467)
T ss_pred             eecccc
Confidence            655543

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.85  E-value=0.1  Score=35.26  Aligned_cols=49  Identities=18%  Similarity=0.371  Sum_probs=34.6

Q ss_pred             cccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        209 ICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       209 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      .|--|...|.......  ...-.....|+|+.|...|=..-++-.|...|.
T Consensus        57 ~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhhhhccC
Confidence            4999999998653111  000123456999999999998888888887774

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.57  E-value=0.03  Score=47.92  Aligned_cols=149  Identities=22%  Similarity=0.393  Sum_probs=105.7

Q ss_pred             cceecCCCcccccchhHHHhhhh--hcCCC--CeeecC--cchhhccChhHHHHHHHHhhcCCCcccCcc--ccccccCc
Q psy11589         65 VSYKCPDCSVIVVSYSGFKSHLD--IHNVE--KEYCCH--ICKKVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADI  136 (262)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~  136 (262)
                      .++.|..|...|.....|..|.+  .|.++  .++.|+  .|++.|.....+..| ...|.+..++.+..  +...+...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRH-ILLHTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCC-cccccCCCccccccccCccccccc
Confidence            46899999999999999999999  89999  899999  799999999999999 56787777766654  33333222


Q ss_pred             hhHHhH-----HhhhCCCCcccc--CcccccccCcchHHHHHhhcCC---CcccCCcchhcCCCChHHHHHHHhhcCCCC
Q psy11589        137 TNMKVH-----MRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTN---TQFVCSYCGNTYKNPKALTSHIRNSHTIHQ  206 (262)
Q Consensus       137 ~~l~~H-----~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~---~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  206 (262)
                      ..-..+     ...-.......+  ..|...+.....+..|...+..   ..+.+..|...+.....+..|++ .|....
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  445 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKK-IHTNHA  445 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccc-ccccCC
Confidence            221101     111112223333  2355666666677777766654   36778889999999999999988 777777


Q ss_pred             ccccccccc
Q psy11589        207 KSICDVCGK  215 (262)
Q Consensus       207 ~~~C~~C~~  215 (262)
                      ++.|..++.
T Consensus       446 ~~~~~~~~~  454 (467)
T COG5048         446 PLLCSILKS  454 (467)
T ss_pred             ceeeccccc
Confidence            776655443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.42  E-value=0.29  Score=33.22  Aligned_cols=26  Identities=31%  Similarity=0.598  Sum_probs=19.2

Q ss_pred             CceecccCCCCCceeeehHHHHHHHhhhccC
Q psy11589          8 SDFVCNLCPPGSKVVVKYVHYLERHVRKHHT   38 (262)
Q Consensus         8 ~~~~C~~C~~~~~~~~~~~~~l~~H~~~~~~   38 (262)
                      +-..|..|+.    .... +.+..|++..|.
T Consensus        10 ~vlIC~~C~~----av~~-~~v~~HL~~~H~   35 (109)
T PF12013_consen   10 RVLICRQCQY----AVQP-SEVESHLRKRHH   35 (109)
T ss_pred             CEEEeCCCCc----ccCc-hHHHHHHHHhcc
Confidence            5678999987    4433 889999986543

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.17  E-value=0.078  Score=27.57  Aligned_cols=24  Identities=25%  Similarity=0.516  Sum_probs=21.3

Q ss_pred             CceecccCCCCCceeeehHHHHHHHhhh
Q psy11589          8 SDFVCNLCPPGSKVVVKYVHYLERHVRK   35 (262)
Q Consensus         8 ~~~~C~~C~~~~~~~~~~~~~l~~H~~~   35 (262)
                      .+|.|.+|+.    .|.+...+..|+..
T Consensus         2 ~~~~C~~C~~----~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNV----TFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCC----ccCCHHHHHHHHCh
Confidence            4689999999    99999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=93.09  E-value=0.054  Score=40.27  Aligned_cols=84  Identities=19%  Similarity=0.449  Sum_probs=67.3

Q ss_pred             CcccCcc--ccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhcCC-----------CcccCCc--chh
Q psy11589        122 REHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN-----------TQFVCSY--CGN  186 (262)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~C~~--C~~  186 (262)
                      ..+.|++  |...|.+...+..|..+-++   -.|..|.+.|.+...|..|+..-++           ..|.|.+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4578877  88899988888888876665   3699999999999999999865433           2478854  999


Q ss_pred             cCCCChHHHHHHHhhcCCCCcc
Q psy11589        187 TYKNPKALTSHIRNSHTIHQKS  208 (262)
Q Consensus       187 ~f~~~~~l~~H~~~~H~~~~~~  208 (262)
                      .|.+...-..|+-..|.-...|
T Consensus       155 KFkT~r~RkdH~I~~Hk~Pa~f  176 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKYPADF  176 (253)
T ss_pred             hhhhhhhhhhHHHHhccCCcce
Confidence            9999999999999888754444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.07  E-value=0.15  Score=34.69  Aligned_cols=25  Identities=24%  Similarity=0.558  Sum_probs=20.1

Q ss_pred             ccC----CCCCcccCChHHHHHHHHhhcc
Q psy11589        236 FVC----NMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       236 ~~C----~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      |.|    +.|++.+.+...+.+|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            788    8888888888888888877765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.23  E-value=0.17  Score=29.00  Aligned_cols=27  Identities=15%  Similarity=0.528  Sum_probs=13.3

Q ss_pred             CCccceecCCCcccccchhHHHhhhhh
Q psy11589         62 NKKVSYKCPDCSVIVVSYSGFKSHLDI   88 (262)
Q Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~   88 (262)
                      .++.-+.|+-|+..|....+..+|...
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            344445555555555555555555443

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.29  E-value=0.15  Score=26.44  Aligned_cols=10  Identities=40%  Similarity=0.906  Sum_probs=5.1

Q ss_pred             cccccccccc
Q psy11589        208 SICDVCGKEF  217 (262)
Q Consensus       208 ~~C~~C~~~f  217 (262)
                      |.|.+||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            4555555443

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.49  E-value=0.2  Score=28.75  Aligned_cols=32  Identities=25%  Similarity=0.472  Sum_probs=27.2

Q ss_pred             hcCCCCeeecCcchhhccChhHHHHHHHHhhc
Q psy11589         88 IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHE  119 (262)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  119 (262)
                      .-.++..+.|+-|+..|....+...|+...|.
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            34567779999999999999999999877774

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=89.09  E-value=0.2  Score=36.57  Aligned_cols=23  Identities=39%  Similarity=1.040  Sum_probs=16.3

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCCCcccccccc
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCG  214 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  214 (262)
                      .|.|++||..              +.++.|-+||+||
T Consensus       134 ~~vC~vCGy~--------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT--------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc--------------ccCCCCCcCCCCC
Confidence            5778888763              4456777788887

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=88.39  E-value=0.35  Score=23.39  Aligned_cols=10  Identities=30%  Similarity=0.853  Sum_probs=6.5

Q ss_pred             cCCCCCcccC
Q psy11589        237 VCNMCPSTFK  246 (262)
Q Consensus       237 ~C~~C~~~f~  246 (262)
                      .|+.||+.|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            5677776664

Several members are annotated as putative helicases.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.86  E-value=0.092  Score=40.42  Aligned_cols=13  Identities=23%  Similarity=0.470  Sum_probs=8.2

Q ss_pred             ccccccccccCCh
Q psy11589        208 SICDVCGKEFRMK  220 (262)
Q Consensus       208 ~~C~~C~~~f~~~  220 (262)
                      ..||.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            4577777766543

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.21  E-value=0.14  Score=39.37  Aligned_cols=14  Identities=29%  Similarity=0.653  Sum_probs=11.2

Q ss_pred             cccCCcchhcCCCC
Q psy11589        178 QFVCSYCGNTYKNP  191 (262)
Q Consensus       178 ~~~C~~C~~~f~~~  191 (262)
                      .+.||.||++|...
T Consensus        48 V~vCP~CgyA~~~~   61 (214)
T PF09986_consen   48 VWVCPHCGYAAFEE   61 (214)
T ss_pred             EEECCCCCCccccc
Confidence            36899999987765

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=87.17  E-value=0.36  Score=26.73  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=14.4

Q ss_pred             ccccccccccCChHHHHHHHHhhCCCCCccCCCCCcc
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPST  244 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  244 (262)
                      |.|..||..|...           ...+.+|+.||..
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----------CCCceECCCCCce
Confidence            5666666665532           2244566666654

present in RNA polymerase I, II and III

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=85.78  E-value=0.42  Score=25.37  Aligned_cols=9  Identities=22%  Similarity=0.678  Sum_probs=3.6

Q ss_pred             ccCCCCCcc
Q psy11589        236 FVCNMCPST  244 (262)
Q Consensus       236 ~~C~~C~~~  244 (262)
                      ..|+.|+..
T Consensus        26 v~C~~C~~~   34 (38)
T TIGR02098        26 VRCGKCGHV   34 (38)
T ss_pred             EECCCCCCE
Confidence            334444433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=85.75  E-value=0.31  Score=37.79  Aligned_cols=26  Identities=23%  Similarity=0.453  Sum_probs=17.7

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhh
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      .+++.||.||+....-.+|.+-.|+|
T Consensus       207 ~k~~PCPKCg~et~eTkdLSmStR~h  232 (314)
T PF06524_consen  207 GKPIPCPKCGYETQETKDLSMSTRSH  232 (314)
T ss_pred             CCCCCCCCCCCcccccccceeeeecc
Confidence            36778888887777666666555554

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PHA00626 hypothetical protein

Probab=85.18  E-value=0.2  Score=28.83  Aligned_cols=12  Identities=25%  Similarity=0.537  Sum_probs=5.4

Q ss_pred             cccccccccccC
Q psy11589        207 KSICDVCGKEFR  218 (262)
Q Consensus       207 ~~~C~~C~~~f~  218 (262)
                      .|.|+.||+.|+
T Consensus        23 rYkCkdCGY~ft   34 (59)
T PHA00626         23 DYVCCDCGYNDS   34 (59)
T ss_pred             ceEcCCCCCeec
Confidence            344444444443

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=84.59  E-value=0.49  Score=26.73  Aligned_cols=28  Identities=29%  Similarity=0.701  Sum_probs=15.1

Q ss_pred             cccccccccccCChHHHHHHHHhhCCCCCccCCCCCcc
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPST  244 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  244 (262)
                      .|.|..||+.|...          .......|++||..
T Consensus         6 ~Y~C~~Cg~~~~~~----------~~~~~irCp~Cg~r   33 (49)
T COG1996           6 EYKCARCGREVELD----------QETRGIRCPYCGSR   33 (49)
T ss_pred             EEEhhhcCCeeehh----------hccCceeCCCCCcE
Confidence            46677777666111          12344567777653

>smart00614 ZnF_BED BED zinc finger

Probab=84.58  E-value=0.8  Score=26.08  Aligned_cols=21  Identities=24%  Similarity=0.610  Sum_probs=13.4

Q ss_pred             ccCCCCCcccCCh-----HHHHHHHH
Q psy11589        236 FVCNMCPSTFKLK-----KHLRQHYK  256 (262)
Q Consensus       236 ~~C~~C~~~f~~~-----~~L~~H~~  256 (262)
                      -.|.+|++.+...     ++|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            3566666666554     47777776

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=83.96  E-value=0.83  Score=24.18  Aligned_cols=10  Identities=30%  Similarity=0.959  Sum_probs=4.3

Q ss_pred             ecCCCccccc
Q psy11589         68 KCPDCSVIVV   77 (262)
Q Consensus        68 ~C~~C~~~f~   77 (262)
                      .|+.|+..|.
T Consensus         4 ~CP~C~~~f~   13 (37)
T PF13719_consen    4 TCPNCQTRFR   13 (37)
T ss_pred             ECCCCCceEE
Confidence            3444444443

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=83.77  E-value=1.1  Score=32.64  Aligned_cols=33  Identities=18%  Similarity=0.388  Sum_probs=20.8

Q ss_pred             CCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCccc
Q psy11589        204 IHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF  245 (262)
Q Consensus       204 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  245 (262)
                      ...-|.|+.|+..|+....+.         .-|.|+.||...
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            345567777777776666653         247777777653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=83.41  E-value=0.88  Score=30.76  Aligned_cols=12  Identities=42%  Similarity=1.046  Sum_probs=4.9

Q ss_pred             cccccccccccC
Q psy11589        207 KSICDVCGKEFR  218 (262)
Q Consensus       207 ~~~C~~C~~~f~  218 (262)
                      |-.|+.||..|.
T Consensus        26 PivCP~CG~~~~   37 (108)
T PF09538_consen   26 PIVCPKCGTEFP   37 (108)
T ss_pred             CccCCCCCCccC
Confidence            334444444443

The function of members of this family is unknown.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.30  E-value=0.97  Score=23.77  Aligned_cols=9  Identities=33%  Similarity=1.036  Sum_probs=3.8

Q ss_pred             cCCCccccc
Q psy11589         69 CPDCSVIVV   77 (262)
Q Consensus        69 C~~C~~~f~   77 (262)
                      |+.|+..|.
T Consensus         5 Cp~C~~~y~   13 (36)
T PF13717_consen    5 CPNCQAKYE   13 (36)
T ss_pred             CCCCCCEEe
Confidence            444444443

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=83.26  E-value=0.36  Score=26.07  Aligned_cols=10  Identities=60%  Similarity=1.554  Sum_probs=4.1

Q ss_pred             cccCcccccc
Q psy11589        152 YVCETCGASF  161 (262)
Q Consensus       152 ~~C~~C~~~f  161 (262)
                      |.|+.||..|
T Consensus         6 y~C~~Cg~~f   15 (41)
T smart00834        6 YRCEDCGHTF   15 (41)
T ss_pred             EEcCCCCCEE
Confidence            3344444433

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=81.99  E-value=0.7  Score=27.14  Aligned_cols=7  Identities=43%  Similarity=1.735  Sum_probs=2.6

Q ss_pred             cccCccc
Q psy11589        152 YVCETCG  158 (262)
Q Consensus       152 ~~C~~C~  158 (262)
                      |.|+.||
T Consensus        26 F~CPnCG   32 (59)
T PRK14890         26 FLCPNCG   32 (59)
T ss_pred             eeCCCCC
Confidence            3333333

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=81.97  E-value=1.4  Score=34.33  Aligned_cols=39  Identities=18%  Similarity=0.477  Sum_probs=17.4

Q ss_pred             CCCcccCccccccccCchhHHhHHhhh--CCCCccccCcccc
Q psy11589        120 NVREHQCSVCGKAFADITNMKVHMRIH--TGEKKYVCETCGA  159 (262)
Q Consensus       120 ~~~~~~C~~C~~~f~~~~~l~~H~~~h--~~~~~~~C~~C~~  159 (262)
                      +.+.|.|..|....-. ..--.|+..-  .....|+|.-|++
T Consensus       139 GGrif~CsfC~~flCE-DDQFEHQAsCQvLe~E~~KC~SCNr  179 (314)
T PF06524_consen  139 GGRIFKCSFCDNFLCE-DDQFEHQASCQVLESETFKCQSCNR  179 (314)
T ss_pred             CCeEEEeecCCCeeec-cchhhhhhhhhhhhccccccccccc
Confidence            4456666666653322 2222343221  1223466666654

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=81.80  E-value=1.2  Score=24.62  Aligned_cols=23  Identities=22%  Similarity=0.587  Sum_probs=11.1

Q ss_pred             CCCccCCCCCcccCCh----HHHHHHH
Q psy11589        233 DRPFVCNMCPSTFKLK----KHLRQHY  255 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~----~~L~~H~  255 (262)
                      ....+|.+|++.+...    ++|.+|+
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL   40 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHL   40 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhh
Confidence            3445666666665553    5666666

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.54  E-value=0.9  Score=30.73  Aligned_cols=12  Identities=42%  Similarity=1.093  Sum_probs=5.1

Q ss_pred             ccccCccccccc
Q psy11589        151 KYVCETCGASFA  162 (262)
Q Consensus       151 ~~~C~~C~~~f~  162 (262)
                      |..|+.||..|.
T Consensus        26 PivCP~CG~~~~   37 (108)
T PF09538_consen   26 PIVCPKCGTEFP   37 (108)
T ss_pred             CccCCCCCCccC
Confidence            344444444443

The function of members of this family is unknown.

>KOG2186|consensus

Probab=81.14  E-value=1  Score=34.90  Aligned_cols=45  Identities=27%  Similarity=0.633  Sum_probs=19.4

Q ss_pred             cccCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHH
Q psy11589        152 YVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHI  198 (262)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~  198 (262)
                      |.|..||....- ..+..|+....+.-|.|-.|+.+|.. ..+..|.
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhh
Confidence            344444443322 23334444444444444445544444 3344443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	262
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-24
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-12
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		7e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		9e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		6e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-08
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		9e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-07
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		7e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		4e-05
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		7e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		8e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		2e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 88  IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHT 147
           +   EK Y C  C K F R+ +L  H +  H   + ++C  CGK+F+D  ++  H R HT
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHT 73
Query: 148 GEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQ 206
           GEK Y C  CG SF+   +L  H  +HT  + + C  CG ++     L +H R +HT  +
Sbjct: 74  GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEK 132
Query: 207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHL 259
              C  CGK F  +  L  H   HT ++P+ C  C  +F  +  L  H + H 
Sbjct: 133 PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 91  VEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
           +EK Y C  C K F ++ NL  H +  H   + ++C  CGK+F+  ++++ H R HTGEK
Sbjct: 1   MEKPYKCPECGKSFSQSSNLQKHQR-THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEK 59
Query: 151 KYVCETCGASFALWGSLNVHSYSHTN 176
            Y C  CG SF+    L+ H  +H N
Sbjct: 60  PYKCPECGKSFSRSDHLSRHQRTHQN 85

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
           + C  CG ++     L  H R +HT  +   C  CGK F     L++H   HT ++P+ C
Sbjct: 5   YKCPECGKSFSQSSNLQKHQR-THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 239 NMCPSTFKLKKHLRQHYKVH 258
             C  +F    HL +H + H
Sbjct: 64  PECGKSFSRSDHLSRHQRTH 83

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 97  CHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           C IC K F R+  L  H+  +H + R + C  CGK F   ++MK H  IHTGEK + C+ 
Sbjct: 4   CKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 157 CGASFALWGSLNVHSYSHTN 176
           CG +F+   +L  HS  HT 
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
           F C  CG ++K    L++H+   H+  +   C  CGK F  K  +K+H  +HT ++P  C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 239 NMCPSTFKLKKHLRQHYKVH 258
            +C   F    +L  H + H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCS 182
           H+C VCGK F+    +K HMR HTG K Y C+TC  + A   SLN H   H++ + F C 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 183 YCGNTYKNPKALTSHIRNSHT 203
            C    +N   LT H+R SHT
Sbjct: 69  ICPYASRNSSQLTVHLR-SHT 88

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 181 CSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM 240
           C  CG  +     L +H+R  HT  +   C  C         L +H+ +H+ +RPF C +
Sbjct: 11  CEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 241 CP----STFKLKKHLRQH 254
           CP    ++ +L  HLR H
Sbjct: 70  CPYASRNSSQLTVHLRSH 87

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F +  NL  HI+ +H   +  QC +C + F+  T +  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTG 59
Query: 149 EKKYVCETCGASFALWGSLNVHSYSH 174
           EK + C+ CG  FA   + + H+  H
Sbjct: 60  EKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ- 178
           R + C V  C + F+  TN+  H+RIHTG+K + C  C  +F+    LN H  +HT  + 
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP 62
Query: 179 FVCSYCGNTYKNPKALTSHIRNSHT 203
           F C  CG  +      T H R+ HT
Sbjct: 63  FACDICGRKF-----ATLHTRDRHT 82

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     L +HIR  HT  +   C +C + F     L +H+  HT ++PF C++C  
Sbjct: 12  CDRRFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F       +H K+HL+ +
Sbjct: 71  KFATLHTRDRHTKIHLRQK 89

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ- 178
           R + C V  C + F+  TN+  H+RIHTG+K + C  C  +F+   SLN H  +HT  + 
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP 62
Query: 179 FVCSYCGNTYKNPKALTSHIRNSHT 203
           F C  CG  +      T H R  HT
Sbjct: 63  FACDICGRKF-----ATLHTRTRHT 82

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     L +HIR  HT  +   C +C + F  +  L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F       +H K+HL+ +
Sbjct: 71  KFATLHTRTRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F R+ +L  HI+ +H   +  QC +C + F+   ++  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSRSADLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 149 EKKYVCETCGASFALWGSLNVHSYSH 174
           EK + C+ CG  FA       H+  H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSRSADLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F      ++H K+HL+ +
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNT---QFVCS 182
           C +CGK F D+ ++  H   H+GEK Y C  CG  F     ++ H  SH  +    ++C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 183 YCGNTYKNPKALTSHIRNSHT 203
            CG  +  P  L  HI+  H+
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHS 90

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 173 SHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVH-- 230
           S  ++   C  CG  +++   L  H + SH+  +   C VCG  F+ K ++  H+  H  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Query: 231 TTDRPFVCNMCPSTFKLKKHLRQHYK 256
           +  +P++C  C   F    HL  H K
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIK 86

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 129 CGKAFADITNMKVHMRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTNTQ-FVCSY-- 183
           CG A+     ++ H+  HTGEK + C  E C   F     L  HS +HT  + F C    
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSIC------DVCGKEFRMKRQLKEHMAVHTTDRPFV 237
           C   +     +  H    H I    IC      + CGK F+   QLK H   HT   P+ 
Sbjct: 80  CDLRFTTKANMKKHFNRFHNI---KICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYE 136
Query: 238 C--NMCPSTFKLKKHLRQHYKVH 258
           C    C   F L   L++H KVH
Sbjct: 137 CPHEGCDKRFSLPSRLKRHEKVH 159

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F R+  L  HI+ +H   +  QC +C + F+   ++  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 149 EKKYVCETCGASFALWGSLNVHSYSH 174
           EK + C+ CG  FA       H+  H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F      ++H K+HL+ +
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F R+  L  HI+ +H   +  QC +C + F+   ++  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSRSAELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 149 EKKYVCETCGASFALWGSLNVHSYSH 174
           EK + C+ CG  FA       H+  H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSRSAELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F      ++H K+HL+ +
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F  + NL  HI+ +H   +  QC +C + F+   ++  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSDSSNLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 149 EKKYVCETCGASFALWGSLNVHSYSH 174
           EK + C+ CG  FA       H+  H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   + +   LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSDSSNLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F      ++H K+HL+ +
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 100 CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVC--ETC 157
           C K+F  N  +  H+       R H C+ CGKAF + + +K H  +HTGEK + C  E C
Sbjct: 13  CTKMFRDNSAMRKHLHT--HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC 70
Query: 158 GASFALWGSLNVHSYSHTNTQ-FVCSY--CGNTYKNPKALTSHI 198
           G  F+L  +L  H   HT  + +VC +  C   +     L SHI
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 31/137 (22%)
Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNT 187
           C K F D + M+ H+  H G + +VC  CG +F     L  H   HT  + F C++ G  
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG-- 69
Query: 188 YKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC--NMCPSTF 245
                                    CGK F +   L+ H+ +HT DRP+VC  + C   F
Sbjct: 70  -------------------------CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104
Query: 246 KLKKHLRQHYKVHLKME 262
               +L+ H   H K +
Sbjct: 105 AQSTNLKSHILTHAKAK 121

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 92  EKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
           E+ Y C +  C + F R+  L  HI+ +H   +  QC +C + F+   ++  H+R HTGE
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 59
Query: 150 KKYVCETCGASFALWGSLNVHSYSH 174
           K + C+ CG  FA       H+  H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 11  CDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 69
Query: 244 TFKLKKHLRQHYKVHLKM 261
            F      ++H K+HL+ 
Sbjct: 70  KFARSDERKRHTKIHLRQ 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 92  EKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
           E+ Y C +  C + F R+  L  HI+ +H   +  QC +C + F+   ++  H+R HTGE
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 150 KKYVCETCGASFALWGSLNVHSYSH 174
           K + C+ CG  FA       H+  H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +     LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLK 260
            F      ++H K+HL+
Sbjct: 71  KFARSDERKRHTKIHLR 87

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 91  VEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
            +KE+ C  C + F ++ NL+ H +  H + R + C +C KAF    +++ H  IH+ EK
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK 72
Query: 151 KYVCETCGASFALWGSLNVHSYSHTNT 177
            + C+ CG  F    +L VH   H  T
Sbjct: 73  PFKCQECGKGFCQSRTLAVHKTLHMQT 99

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 173 SHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT 232
           S T  +F+C +CG  +     L  H R +HT  +   CD+C K FR +  L++H  +H+ 
Sbjct: 12  SKTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSK 70
Query: 233 DRPFVCNMCPSTFKLKKHLRQHYKVHLK 260
           ++PF C  C   F   + L  H  +H++
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 88  IHNVEKEYCCHICK-----KVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADITNMK 140
           IH   KE+ CH        + F     LV H++  H   + H+C+   C K+++ + N+K
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLK 86
Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNV---HSYSHTNTQ-FVCSYCGNT--YKNPKAL 194
            H+R HTGEK Y+CE  G S A   + +     + +H+N + +VC   G T  Y +P +L
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL 146
Query: 195 TSHIRNSH 202
             H++  H
Sbjct: 147 RKHVKTVH 154

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 40/171 (23%)
Query: 100 CKKVFLRNRNLVCHIKA--VHENVREHQCSVCG-----KAFADITNMKVHMRIHTGEKKY 152
           C + F     LV HI +  +H   +E  C   G     + F     + VHMR HTGEK +
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH 68
Query: 153 VC--ETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKSI 209
            C  E C  S++   +L  H  SHT  + ++C + G                        
Sbjct: 69  KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG------------------------ 104
Query: 210 CDVCGKEFRMKRQLKEHM-AVHTTDRPFVCNM--CPSTFKLKKHLRQHYKV 257
              C K F       +H    H+ ++P+VC +  C   +     LR+H K 
Sbjct: 105 ---CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYC 184
           +C  C K F     +KVH R HTGEK + C  CG  +                       
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCY----------------------- 45
Query: 185 GNTYKNPKALTSHIRN-SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
              ++    L    RN  +   Q   C VC + FR + +L+ HM  HT + P+ C+ C  
Sbjct: 46  ---FRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102
Query: 244 TFKLKKHLRQH 254
            F  KK L+ H
Sbjct: 103 QFMQKKDLQSH 113

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F ++ +L  HI+ +H   +  QC +C + F+   ++  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 149 EKKYVCETCGASFALWGSLNVHSYSH 174
           EK + C+ CG  FA       H+  H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +    +LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70
Query: 244 TFKLKKHLRQHYKVHLKME 262
            F      ++H K+HL+ +
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNT-QFVCSYC 184
           C VC +++  +T+++ H  IH+ EKKY C  C   F L      H   HT   ++ C  C
Sbjct: 25  CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLAC 84
Query: 185 GNTYKNPKALTSHIRNSHT 203
           G ++ N + ++SHI++ H+
Sbjct: 85  GKSFINYQFMSSHIKSVHS 103

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 92  EKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
           +K Y C  C+  F    NL  H K VH   + ++C++CG  F    N+K H RIH+GEK
Sbjct: 15  DKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           CD C   FR K  L  H  VHT ++P+ CN+C + F    +L+ H ++H
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 180 VCSY--CGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRP 235
            C Y  CG TY     L +H+R +HT  +   CD   CG +F    +L  H   HT  RP
Sbjct: 8   TCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 66
Query: 236 FVCNMCPSTFKLKKHLRQHYKVHL 259
           F C  C   F    HL  H K H 
Sbjct: 67  FQCQKCDRAFSRSDHLALHMKRHF 90

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 180 VCSY--CGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRP 235
            C Y  CG TY     L +H+R +HT  +   CD   CG +F    +L  H   HT  RP
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65
Query: 236 FVCNMCPSTFKLKKHLRQHYKVHL 259
           F C  C   F    HL  H K H 
Sbjct: 66  FQCQKCDRAFSRSDHLALHMKRHF 89

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNT 177
           R ++C  CGK+F+  +++  H R HTGEK Y C+ CG +F     L  H   HT +
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           CD CGK F     L +H   HT ++P+ C+ C   F  + HL  H++VH
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 38/146 (26%)
Query: 100 CKKVFLRNRNLVCHIKAVHENVREHQCSVC--------GKAFADITNMKVHMRIHTGEKK 151
           C + F     LV H+   H    E    VC        GK+F     +  H+R+HTGEK 
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 152 YVC--ETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHTIHQKS 208
           + C    CG  FA   +L +H  +HT  + F C + G                       
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG----------------------- 127
Query: 209 ICDVCGKEFRMKRQLKEHMAVHTTDR 234
               C + F      K+HM VHT+D+
Sbjct: 128 ----CDRRFANSSDRKKHMHVHTSDK 149

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 213 CGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME 262
           CGK F  K Q   HM++H   RP+ C +C   FK+K HL  H K+H  ++
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 70  PDCSVIVVSYSGFKSHLDIHNVEKEYCC--HICKKVFLRNRNLVCHIKAVHENVREHQCS 127
           P C+ +    S  K+HL  H  EK Y C    C   F R+  L  H +  H   +  QC 
Sbjct: 21  PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTGAKPFQCG 79
Query: 128 VCGKAFADITNMKVHMRIH 146
           VC ++F+   ++ +HM+ H
Sbjct: 80  VCNRSFSRSDHLALHMKRH 98

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 32/134 (23%)
Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCE--TCGASFALWGSLNVHSYSHTNTQFVCSYCGN 186
           C K +  ++++++H R HTGEK Y C+   C   F+    L  H   HT  +        
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF------ 67
Query: 187 TYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM--CPST 244
                                  C  C ++F     LK H   HT ++PF C    C   
Sbjct: 68  ----------------------QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK 105
Query: 245 FKLKKHLRQHYKVH 258
           F     L +H+ +H
Sbjct: 106 FARSDELVRHHNMH 119

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSIC---DVCGKEFRMKRQLKEHMAVHTTDRPFVCNM 240
           CG  + N + L  H +  H IHQKS       CGK F  K+ LKEHM +H+  R ++C  
Sbjct: 15  CGRIFSNRQYLNHHKKYQH-IHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
           + + C  CGKAF+  + +  H R+HTGEK Y C  CG +F+    L  H   HT+
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVH 170
           +CS CGK F     + +H+R HTGEK Y CE C  + A   SL  H
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYH 51

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFA 162
           QC +C + F+   ++  H+R HTGEK + C+ CG  FA
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 42

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 175 TNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVH 230
           +   F C++CG TY++   L+ H R +H  ++   C  CGK FR + ++  H+ VH
Sbjct: 1   SERPFFCNFCGKTYRDASGLSRH-RRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	262
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-31
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-21
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-18
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	6e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	6e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  113 bits (285), Expect = 3e-31
 Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 3/180 (1%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
           S   +   +   EK Y C  C K F R+ +L  H +  H   + ++C  CGK+F+D  ++
Sbjct: 7   SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDL 65

Query: 140 KVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHI 198
             H R HTGEK Y C  CG SF+   +L  H  +HT  + + C  CG ++     L +H 
Sbjct: 66  TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ 125

Query: 199 RNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           R +HT  +   C  CGK F  +  L  H   HT ++P+ C  C  +F  +  L  H + H
Sbjct: 126 R-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 93.7 bits (234), Expect = 1e-23
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 3/170 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           Y CP+C            H   H  EK Y C  C K F   ++L  H +  H   + ++C
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGEKPYKC 80

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
             CGK+F+   N++ H R HTGEK Y C  CG SF+    L  H  +HT  + + C  CG
Sbjct: 81  PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP 235
            ++     L +H R +HT  +   C  CGK F  +  L  H   HT  + 
Sbjct: 141 KSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.1 bits (204), Expect = 2e-19
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 2/128 (1%)

Query: 132 AFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKN 190
           +    ++      +  GEK Y C  CG SF+    L  H  +HT  + + C  CG ++ +
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 191 PKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKH 250
            K LT H R +HT  +   C  CGK F  +  L+ H   HT ++P+ C  C  +F    H
Sbjct: 62  KKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120

Query: 251 LRQHYKVH 258
           LR H + H
Sbjct: 121 LRAHQRTH 128

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 89.2 bits (222), Expect = 6e-22
 Identities = 45/185 (24%), Positives = 64/185 (34%), Gaps = 15/185 (8%)

Query: 85  HLDIHNVEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCS--VCGKAFADITNMK 140
              +  V K Y C    C   + +N  L  H    H   +   C    C K F  + ++ 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 141 VHMRIHTGEKKYVCE--TCGASFALWGSLNVHSYSHT---NTQFVCSY--CGNTYKNPKA 193
            H   HTGEK + C+   C   F    ++  H           +VC +  CG  +K    
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 194 LTSHIRNSHTIHQKSIC--DVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHL 251
           L  H   SHT      C  + C K F +  +LK H  VH        + C    K     
Sbjct: 122 LKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180

Query: 252 RQHYK 256
            +H  
Sbjct: 181 LKHVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 70.7 bits (174), Expect = 4e-15
 Identities = 39/154 (25%), Positives = 52/154 (33%), Gaps = 21/154 (13%)

Query: 67  YKC--PDCSVIVVSYSGFKSHLDIHNVEKEYCC--HICKKVFLRNRNLVCHIKAVH--EN 120
           + C    C     S      H   H  EK + C    C   F    N+  H         
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN-RFHNIK 101

Query: 121 VREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTN 176
           +  + C    CGKAF     +KVH   HT +  Y C  E C   F+L   L  H   H  
Sbjct: 102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

Query: 177 TQ----FVCSYCGNTYKNPKALTSHIRNSHTIHQ 206
                   CS+ G      K  T ++++    HQ
Sbjct: 162 YPCKKDDSCSFVG------KTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 65.7 bits (161), Expect = 3e-13
 Identities = 33/137 (24%), Positives = 46/137 (33%), Gaps = 34/137 (24%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCE--TCGASFALWGSLNVHSYSHTNTQ-FVCSYCG 185
           CG A+     ++ H+  HTGEK + C+   C   F     L  HS +HT  + F C   G
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79

Query: 186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT--DRPFVCNM--C 241
                                      C   F  K  +K+H           +VC+   C
Sbjct: 80  ---------------------------CDLRFTTKANMKKHFNRFHNIKICVYVCHFENC 112

Query: 242 PSTFKLKKHLRQHYKVH 258
              FK    L+ H   H
Sbjct: 113 GKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 61.5 bits (150), Expect = 9e-12
 Identities = 26/122 (21%), Positives = 40/122 (32%), Gaps = 32/122 (26%)

Query: 142 HMRIHTGEKKYVCET--CGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHI 198
              +    K+Y+C    CGA++     L  H   HT  + F C   G             
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG------------- 49

Query: 199 RNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN--MCPSTFKLKKHLRQHYK 256
                         C K F     L  H   HT ++ F C+   C   F  K ++++H+ 
Sbjct: 50  --------------CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95

Query: 257 VH 258
             
Sbjct: 96  RF 97

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 85.4 bits (212), Expect = 5e-21
 Identities = 40/167 (23%), Positives = 59/167 (35%), Gaps = 38/167 (22%)

Query: 84  SHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVH--------ENVREHQCSVCGKAFAD 135
           S   I   +       C + F     LV H+   H              +C   GK+F  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 136 ITNMKVHMRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPK 192
              +  H+R+HTGEK + C    CG  FA   +L +H  +HT  + F C + G       
Sbjct: 75  KYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG------- 127

Query: 193 ALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN 239
                               C + F      K+HM VHT+D+    +
Sbjct: 128 --------------------CDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 76.2 bits (188), Expect = 2e-17
 Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYC---------CHICKKVFLRNRNLVCHIKAV 117
                C     +     +H+ + +V              C    K F     LV HI+ V
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-V 84

Query: 118 HENVREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCET--CGASFALWGSLNVHSYS 173
           H   +   C    CGK FA   N+K+H R HTGEK + CE   C   FA       H + 
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

Query: 174 HTNTQ-FVCS 182
           HT+ +    S
Sbjct: 145 HTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 73.9 bits (182), Expect = 1e-16
 Identities = 34/144 (23%), Positives = 48/144 (33%), Gaps = 15/144 (10%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT----------NTQ 178
            G +   I        I   +     ++C  +F+    L  H                  
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRPF 236
             C   G ++K    L +HIR  HT  +   C    CGK F     LK H   HT ++PF
Sbjct: 63  EECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 237 VCNM--CPSTFKLKKHLRQHYKVH 258
            C    C   F      ++H  VH
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVH 145

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 40/180 (22%)

Query: 92  EKEYCCHICKKVFLRNRNLVCHIKA--VHENVREHQCSVCG-----KAFADITNMKVHMR 144
           E +     C + F     LV HI +  +H   +E  C   G     + F     + VHMR
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 145 IHTGEKKYVC--ETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNS 201
            HTGEK + C  E C  S++   +L  H  SHT  + ++C + G                
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG---------------- 104

Query: 202 HTIHQKSICDVCGKEFRMKRQLKEHMA-VHTTDRPFVCNM--CPSTFKLKKHLRQHYKVH 258
                      C K F       +H    H+ ++P+VC +  C   +     LR+H K  
Sbjct: 105 -----------CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.6 bits (197), Expect = 1e-18
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)

Query: 67  YKCPDCSVIVVSYSGFKSHLD---IHNVEKEYCCHIC-----KKVFLRNRNLVCHIKAVH 118
            +   CS    S      H++   IH   KE+ CH        + F     LV H++  H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RH 62

Query: 119 ENVREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCE--TCGASFALWGSLNVHSY-S 173
              + H+C+   C K+++ + N+K H+R HTGEK Y+CE   C  +F+       H   +
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

Query: 174 HTNTQ-FVCSY--CGNTYKNPKALTSHIRNSHT 203
           H+N + +VC    C   Y +P +L  H++ +  
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVK-TVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 67  YKCP--DCSVIVVSYSGFKSHLDIHNVEKEYCCH--ICKKVFLRNRNLVCHIKAVHENVR 122
           +KC    C          K+HL  H  EK Y C    C K F    +   H    H N +
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127

Query: 123 EHQCSV--CGKAFADITNMKVHMRIHTG 148
            + C +  C K + D ++++ H++   G
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 82.9 bits (206), Expect = 2e-20
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 25/130 (19%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYC 184
           +C  C K F     +KVH R HTGEK + C  CG  +    +L  H   +          
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC--------- 59

Query: 185 GNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPST 244
                            +   Q   C VC + FR + +L+ HM  HT + P+ C+ C   
Sbjct: 60  ----------------MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQ 103

Query: 245 FKLKKHLRQH 254
           F  KK L+ H
Sbjct: 104 FMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 79.1 bits (196), Expect = 6e-19
 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCH--IKAVHENVREH 124
            +CP C    +S    K H   H  EK + C  C K + R  NL+ H     ++ + +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVH 170
            CSVC + F     +++HM  HTGE  Y C +C   F     L  H
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.8 bits (185), Expect = 2e-17
 Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 89  HNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMR---I 145
            +      C  C K FL    L  H    H   +  +C  CGK +    N+  H     +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHT 203
           +  E+ + C  C  +F     L +H  SHT    + CS C   +   K L SH+   H+
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 67  YKCPDCSVIVVSYSGFKSH---LDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVRE 123
           ++CP C            H     ++  E+ + C +C++ F R   L  H+   H     
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV-SHTGEMP 94

Query: 124 HQCSVCGKAFADITNMKVHM-RIHTGEK 150
           ++CS C + F    +++ HM ++H+G  
Sbjct: 95  YKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.8 bits (190), Expect = 4e-18
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 32/134 (23%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCET--CGASFALWGSLNVHSYSHTNTQFVCSYCGN 186
           C K +  ++++++H R HTGEK Y C+   C   F+    L  H   HT  +        
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK-------- 65

Query: 187 TYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM--CPST 244
            ++                    C  C ++F     LK H   HT ++PF C    C   
Sbjct: 66  PFQ--------------------CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK 105

Query: 245 FKLKKHLRQHYKVH 258
           F     L +H+ +H
Sbjct: 106 FARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 92  EKEYCC--HICKKVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADITNMKVHMRIHT 147
           ++ + C    C K + +  +L  H +  H   + +QC    C + F+    +K H R HT
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT 62

Query: 148 GEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSY--CGNTYKNPKALTSHIR 199
           G K + C+TC   F+    L  H+ +HT  + F C +  C   +     L  H  
Sbjct: 63  GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.4 bits (124), Expect = 9e-09
 Identities = 25/108 (23%), Positives = 32/108 (29%), Gaps = 33/108 (30%)

Query: 67  YKC--PDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREH 124
           Y+C   DC          K H   H   K + C                           
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--------------------------- 69

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCET--CGASFALWGSLNVH 170
               C + F+   ++K H R HTGEK + C    C   FA    L  H
Sbjct: 70  --KTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 30/115 (26%)

Query: 147 TGEKKYVCE--TCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHT 203
           + ++ ++C    C   +     L +HS  HT  + + C +                    
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKD------------------ 43

Query: 204 IHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
                    C + F    QLK H   HT  +PF C  C   F    HL+ H + H
Sbjct: 44  ---------CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 75.9 bits (188), Expect = 6e-18
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
           SG          +KE+ C  C + F ++ NL+ H +  H + R + C +C KAF    ++
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHL 61

Query: 140 KVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           + H  IH+ EK + C+ CG  F    +L VH   H 
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 69.8 bits (172), Expect = 1e-15
 Identities = 28/116 (24%), Positives = 38/116 (32%), Gaps = 28/116 (24%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSY 183
             C  CG+ F    N+ +H R HT E+ Y C+ C  +F     L  H Y H+  +     
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK----- 72

Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN 239
               +K                    C  CGK F   R L  H  +H         
Sbjct: 73  ---PFK--------------------CQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 65.9 bits (162), Expect = 4e-14
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 28/118 (23%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRN 200
                   +K+++C+ CG  F    +L +H  +HT+ +         Y            
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP--------YT----------- 47

Query: 201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
                    CD+C K FR +  L++H  +H+ ++PF C  C   F   + L  H  +H
Sbjct: 48  ---------CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 65.1 bits (160), Expect = 6e-14
 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 1/90 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           + C  C            H   H  E+ Y C IC K F R  +L  H + +H   +  +C
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPFKC 76

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVCET 156
             CGK F     + VH  +H         +
Sbjct: 77  QECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.9 bits (180), Expect = 5e-17
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ---FV 180
             C +CGK F D+ ++  H   H+GEK Y C  CG  F     ++ H  SH  +    ++
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 181 CSYCGNTYKNPKALTSHIRNSHT 203
           C  CG  +  P  L  HI+  H+
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.9 bits (167), Expect = 5e-15
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 89  HNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
            +      C IC K+F    +L  H K  H   + + C VCG  F     M  H+R H G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 149 E--KKYVCETCGASFALWGSLNVH 170
              K Y+C++CG  F+    LN H
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVH--ENVREH 124
             C  C  I         H   H+ EK Y C +C   F R   +  H    H     + +
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSVGKPY 66

Query: 125 QCSVCGKAFADITNMKVHM-RIHTGEK 150
            C  CGK F+   ++  H+ ++H+G  
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 57.1 bits (139), Expect = 4e-11
 Identities = 28/113 (24%), Positives = 38/113 (33%), Gaps = 30/113 (26%)

Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIH 205
            +G     CE CG  F     LN H  SH+  +         Y                 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEK--------PYS---------------- 37

Query: 206 QKSICDVCGKEFRMKRQLKEHMAVHT--TDRPFVCNMCPSTFKLKKHLRQHYK 256
               C VCG  F+ K ++  H+  H     +P++C  C   F    HL  H K
Sbjct: 38  ----CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           C++CGK FR    L  H   H+ ++P+ C +C   FK K  +  H + H
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 73.2 bits (181), Expect = 6e-17
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 89  HNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
                 + C +C K F R   L  H++  H  V+ ++C  C  A AD +++  H+RIH+ 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 149 EKKYVCETCGASFALWGSLNVHSYSHT 175
           E+ + C+ C  +      L VH  SHT
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSHT 88

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.7 bits (177), Expect = 2e-16
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 28/115 (24%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSY 183
           H+C VCGK F+    +K HMR HTG K Y C+TC  + A   SLN H   H++ +     
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER----- 63

Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
               +K                    C +C    R   QL  H+  HT D     
Sbjct: 64  ---PFK--------------------CQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 67.8 bits (167), Expect = 5e-15
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           +KC  C          K+H+  H   K Y C  C      + +L  H   +H + R  +C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSDERPFKC 67

Query: 127 SVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +C  A  + + + VH+R HTG+     
Sbjct: 68  QICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.4 bits (145), Expect = 7e-12
 Identities = 25/113 (22%), Positives = 36/113 (31%), Gaps = 28/113 (24%)

Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIH 205
                 + CE CG  F+    L  H   HT  +         YK                
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVK--------PYK---------------- 38

Query: 206 QKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
               C  C         L +H+ +H+ +RPF C +CP   +    L  H + H
Sbjct: 39  ----CKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 71.7 bits (177), Expect = 1e-16
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 91  VEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
           +E+ Y C +  C + F ++ +L  HI+ +H   +  QC +C + F+   ++  H+R HTG
Sbjct: 1   MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59

Query: 149 EKKYVCETCGASFALWGSLNVHSYSHT 175
           EK + C+ CG  FA       H+  H 
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 63.6 bits (156), Expect = 2e-13
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 28/103 (27%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTY 188
           C + F+   ++  H+RIHTG+K + C  C  +F+    L  H  +HT  +         +
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK--------PF 63

Query: 189 KNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
                                CD+CG++F    + K H  +H 
Sbjct: 64  A--------------------CDICGRKFARSDERKRHTKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
                H+ IH  +K + C IC + F R+ +L  HI+  H   +   C +CG+ FA     
Sbjct: 20  GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDER 78

Query: 140 KVHMRIHTGEK 150
           K H +IH  +K
Sbjct: 79  KRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS 243
           C   +    +LT HIR  HT  +   C +C + F     L  H+  HT ++PF C++C  
Sbjct: 12  CDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 244 TFKLKKHLRQHYKVH 258
            F      ++H K+H
Sbjct: 71  KFARSDERKRHTKIH 85

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 72.5 bits (179), Expect = 2e-16
 Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 31/133 (23%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNT 187
           C K F D + M+ H+  H G + +VC  CG +F     L  H   HT  + F C++ G  
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG-- 69

Query: 188 YKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM--CPSTF 245
                                    CGK F +   L+ H+ +HT DRP+VC    C   F
Sbjct: 70  -------------------------CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104

Query: 246 KLKKHLRQHYKVH 258
               +L+ H   H
Sbjct: 105 AQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 70.2 bits (173), Expect = 1e-15
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 36/151 (23%)

Query: 92  EKEYCCHI--CKKVFLRNRNLVCHIKAVH-ENVREHQCSVCGKAFADITNMKVHMRIHTG 148
            +   C    C K+F  N  +  H+   H    R H C+ CGKAF + + +K H  +HTG
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLH-THGP--RVHVCAECGKAFVESSKLKRHQLVHTG 59

Query: 149 EKKYVC--ETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTSHIRNSHTIH 205
           EK + C  E CG  F+L  +L  H   HT  + +VC +                      
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF---------------------- 97

Query: 206 QKSICDVCGKEFRMKRQLKEHMAVHTTDRPF 236
                D C K+F     LK H+  H   +  
Sbjct: 98  -----DGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 58.3 bits (142), Expect = 4e-11
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREH 124
           + C +C    V  S  K H  +H  EK + C    C K F  + NL  H++ +H   R +
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPY 93

Query: 125 QCSV--CGKAFADITNMKVHMRIHTGEKKY 152
            C    C K FA  TN+K H+  H   K  
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 69.8 bits (172), Expect = 7e-16
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 121 VREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFV 180
           ++  QC +C + F+   ++  H+R HTGEK + C+ CG  FA       H         +
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPIL 60

Query: 181 CSYCGNTYKNPKALTSHIRNSHT 203
                        L + +     
Sbjct: 61  EDKVEELLSKNYHLENEVARLKK 83

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 93  KEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKY 152
           K + C IC + F R+ +L  HI+  H   +   C +CG+ FA     K H  I       
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQH-ILPI 59

Query: 153 VCETCGASFALWGSLNVH 170
           + +      +    L   
Sbjct: 60  LEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.0 bits (131), Expect = 5e-10
 Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 5/87 (5%)

Query: 67  YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC 126
           ++C  C           +H+  H  EK + C IC + F R+     H    H        
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILE 61

Query: 127 SVCGKAF---ADITNMKVHMRIHTGEK 150
               +       + N    ++   GE+
Sbjct: 62  DKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
           F C  C   +     LT+HIR +HT  +   CD+CG++F    + K H  +     P + 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILE 61

Query: 239 NMCPSTFKLKKHLRQH 254
           +          HL   
Sbjct: 62  DKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           C +C + F     L  H+  HT ++PF C++C   F      ++H  + 
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.8 bits (172), Expect = 1e-15
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 88  IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHT 147
             + +K Y C  C K F        H+  +H  +R + C VCGK F    ++  HM+IHT
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 148 GEKKYVCETCGASFALWGSLNVHSYSHTNTQ-FVCSYCGNTYKNPKALTS 196
           G K Y C  C   F    S   H +  + T+ +  +            +S
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.9 bits (162), Expect = 4e-14
 Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 32/125 (25%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCG-NT 187
           CGK+F   +    HM +H G + Y C  CG  F +   L  H   HT         G   
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT---------GIKP 65

Query: 188 YKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKL 247
           Y+                    C++C K F  +     H  V +  + +           
Sbjct: 66  YE--------------------CNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTE 103

Query: 248 KKHLR 252
                
Sbjct: 104 ASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.4 bits (158), Expect = 1e-13
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
           S    H+ +H   + Y C +C K F    +LV H+K +H  ++ ++C++C K F    + 
Sbjct: 23  SQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSF 81

Query: 140 KVHMRIHTGEKKYVCETCGASFALWGSLN 168
             H  + +  K Y       +       +
Sbjct: 82  --HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.4 bits (114), Expect = 2e-07
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 213 CGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           CGK F  K Q   HM++H   RP+ C +C   FK+K HL  H K+H
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 5/84 (5%)

Query: 82  FKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVH--ENVRE--HQCSVCGKAFADIT 137
             S    H  EK Y C  C K F + + L  H K  +   N       CS CGK F    
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 138 NMKVHMRIHTGEKKYVCETCGASF 161
            M  H     G      E  G S 
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 22/108 (20%), Positives = 31/108 (28%), Gaps = 24/108 (22%)

Query: 138 NMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSH 197
           +     R HTGEK Y C  C  +F     L++H   + +  FV          P A    
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFV----------PAAFV-- 49

Query: 198 IRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
                       C  CGK F  +  +  H                 + 
Sbjct: 50  ------------CSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 194 LTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT----TDRPFVCNMCPSTFKLKK 249
             S  R +HT  +   C  C K FR K+ L  H   +         FVC+ C  TF  + 
Sbjct: 3   SGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 250 HLRQHYKVH 258
            + +H    
Sbjct: 62  TMARHADNC 70

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.8 bits (167), Expect = 3e-15
 Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 95  YCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           + C IC K F R+  L  H   +H + R + C  CGK F   ++MK H  IHTGEK + C
Sbjct: 2   FDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 155 ETCGASFALWGSLNVHSYSHT 175
           + CG +F+   +L  HS  HT
Sbjct: 61  QVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 60.5 bits (148), Expect = 2e-12
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 28/107 (26%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYC 184
            C +CGK+F   + +  H+ IH+  + Y C+ CG  F     +  H++ HT  +      
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK------ 56

Query: 185 GNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
              +K                    C VCGK F     L  H   HT
Sbjct: 57  --PHK--------------------CQVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.0 bits (139), Expect = 3e-11
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 66  SYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQ 125
           S+ C  C       S   +HL IH+  + Y C  C K F +  ++  H   +H   + H+
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHK 59

Query: 126 CSVCGKAFADITNMKVHMRIHTG 148
           C VCGKAF+  +N+  H R HTG
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 50.1 bits (121), Expect = 1e-08
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
           F C  CG ++K    L++H+   H+  +   C  CGK F  K  +K+H  +HT ++P  C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 239 NMCPSTFKLKKHLRQHYKVH 258
            +C   F    +L  H + H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 67.2 bits (165), Expect = 5e-15
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 89  HNVEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCS--VCGKAFADITNMKVHMR 144
            +      C    C ++F   + L  H K  H + +   C    CGK+F    ++K HM+
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 145 IHTGEKKYVCETCGASF 161
           +H+  + Y+CE  G S 
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 27/102 (26%)

Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIH 205
            +G     C+  G                         CG  + N + L  H +  H   
Sbjct: 2   SSGSSGMPCDFPG-------------------------CGRIFSNRQYLNHHKKYQHIHQ 36

Query: 206 QKSICD--VCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF 245
           +   C    CGK F  K+ LKEHM +H+  R ++C     + 
Sbjct: 37  KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 213 CGKEFRMKRQLKEHM-AVHTTDRPFVCN--MCPSTFKLKKHLRQHYKVH 258
           CG+ F  ++ L  H    H   + F C    C  +F  KKHL++H K+H
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.2 bits (160), Expect = 3e-14
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 138 NMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ---FVCSYCGNTYKNPKAL 194
           +     R H+GEK Y C  C A F   G++ +H           F C +C         L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 195 TSHIRNSHT 203
             H+R  H+
Sbjct: 62  GVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.0 bits (149), Expect = 9e-13
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 83  KSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVH--ENVREHQCSVCGKAFADITNMK 140
            S    H+ EK Y C+IC   F ++  +  HI      ENV +  C  C    A  +++ 
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 141 VHMR-IHTGEKKY 152
           VH+R  H+     
Sbjct: 63  VHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGE--KKYVCETCGASFALWGSLNVH 170
           ++C +C   F     MK+H+     E   K+ C  C    A    L VH
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 194 LTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT--TDRPFVCNMCPSTFKLKKHL 251
             S  R +H+  +   C +C   F     +K H+          F C  C +    K  L
Sbjct: 3   SGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 252 RQH 254
             H
Sbjct: 62  GVH 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.8 bits (153), Expect = 2e-13
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 3/54 (5%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHT---GEKKYVCETCGASFALWGSLNVHSYSH 174
            QC +CG       ++  H R H       ++ CE CG  F    S+  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.4 bits (139), Expect = 3e-11
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ----FVCSYCGNTYKNPKALTSHIRNS 201
            +G     CE CG +     SLN H   H  T     F C +CG  ++ P ++ +H   S
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 202 HTIHQKSICDVCGKEF 217
           H     +  +  G   
Sbjct: 62  HPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.9 bits (130), Expect = 5e-10
 Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 3/52 (5%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTT---DRPFVCNMCPSTFKLKKHLRQHYKVH 258
           C++CG   R K  L  H   H        F C  C   F+    +  H    
Sbjct: 10  CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 6e-09
 Identities = 15/74 (20%), Positives = 21/74 (28%), Gaps = 3/74 (4%)

Query: 92  EKEYCCHICKKVFLRNRNLVCHIK--AVHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
                C IC     +  +L  H +  A         C  CGK F    ++  H       
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 150 KKYVC-ETCGASFA 162
                 E+ G S  
Sbjct: 65  LLLAPQESSGPSSG 78

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 62.1 bits (152), Expect = 3e-13
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           CS C  + +    +++H RIH  ++ + C  C        +L+ H     
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 1/64 (1%)

Query: 89  HNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
            +      C  C         L  H + +H   R  +C+ C       +N+  HM+   G
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 149 EKKY 152
           +   
Sbjct: 63  DMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 18/49 (36%), Positives = 22/49 (44%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           C  C      K  L+ H  +H TDRPF CN C    K   +L +H K  
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/88 (13%), Positives = 22/88 (25%), Gaps = 28/88 (31%)

Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHT 203
              +      C  C  S +   +L +H   H   +         +K              
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDR--------PFK-------------- 39

Query: 204 IHQKSICDVCGKEFRMKRQLKEHMAVHT 231
                 C+ C  + +    L +HM    
Sbjct: 40  ------CNYCSFDTKQPSNLSKHMKKFH 61

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 5/99 (5%)

Query: 82  FKSHLDIHNVEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADIT 137
             S        + + C    C KV+ ++ +L  H++  H   + ++C+   C   FA   
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSD 61

Query: 138 NMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
            +  H R HTG K + C  C  SF+    L +H   H N
Sbjct: 62  ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 33/114 (28%), Positives = 40/114 (35%), Gaps = 32/114 (28%)

Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTNT 177
           R H C    C K +   +++K H+R HTGEK Y C  E C   FA               
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA--------------- 58

Query: 178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
                           LT H R  HT  +   C VC + F     L  HM  H 
Sbjct: 59  ------------RSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 81  GFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMK 140
           G      IH+ EK Y C  C K F R+  LV H + VH   + ++C  CGKAF+  + + 
Sbjct: 1   GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 141 VHMRIHTGEKKY 152
            H RIHT     
Sbjct: 60  NHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 22/52 (42%), Positives = 29/52 (55%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           + C  CGKAF+  + +  H R+HTGEK Y C  CG +F+    L  H   HT
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.9 bits (110), Expect = 2e-07
 Identities = 25/95 (26%), Positives = 31/95 (32%), Gaps = 28/95 (29%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNS 201
              IH+GEK Y C  CG +F+    L  H   HT  +         YK            
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEK--------PYK------------ 44

Query: 202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF 236
                   C  CGK F     L  H  +HT+    
Sbjct: 45  --------CLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 17/49 (34%), Positives = 23/49 (46%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           C  CGK F     L +H  VHT ++P+ C  C   F     L  H ++H
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 19/52 (36%), Positives = 27/52 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           ++C  C  +F    N+  H  +HTGEK Y C  CGA F    +L  H+  H+
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.6 bits (143), Expect = 7e-12
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
                H  + + +K Y C  C+  F    NL  H K VH   + ++C++CG  F    N+
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANL 61

Query: 140 KVHMRIHTGEKKY 152
           K H RIH+GEK Y
Sbjct: 62  KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.1 bits (121), Expect = 8e-09
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 28/99 (28%)

Query: 138 NMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSH 197
           +   H  +   +K Y C+ C ASF   G+L  H   HT  +         Y+        
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEK--------PYR-------- 47

Query: 198 IRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF 236
                       C++CG +F     LK H  +H+ ++P+
Sbjct: 48  ------------CNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 194 LTSHIRNSHTIH--QKS-ICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKH 250
           +  H  +   +    K   CD C   FR K  L  H  VHT ++P+ CN+C + F    +
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 251 LRQHYKVH 258
           L+ H ++H
Sbjct: 61  LKTHTRIH 68

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.8 bits (144), Expect = 8e-12
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 137 TNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTS 196
           ++ K++  I TG  K+ C+ C A++     L VH     + +       N      +   
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 197 HIR-----NSHTIHQKSICDVCGKEFRMKRQLKEHMA 228
                         +   C  CG  F   + L  HM 
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 4/97 (4%)

Query: 78  SYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHE----NVREHQCSVCGKAF 133
           S S  K +  I     ++ C  C   +     L  H+         N      +    + 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 134 ADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVH 170
               ++         +K   C  CG SF     L+VH
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 89  HNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADITNMKVHMRIH 146
                      C K + ++ +L  H++  H   + + C    CG  FA    +  H R H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 147 TGEKKYVCETCGASFALWGSLNVHSYSH 174
           TG + + C+ C  +F+    L +H   H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 32/142 (22%), Positives = 41/142 (28%), Gaps = 54/142 (38%)

Query: 118 HENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNT 177
                    + CGK +   +++K H+R HTGEK Y                         
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYH------------------------ 37

Query: 178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFV 237
              C + G                           CG +F    +L  H   HT  RPF 
Sbjct: 38  ---CDWDG---------------------------CGWKFARSDELTRHYRKHTGHRPFQ 67

Query: 238 CNMCPSTFKLKKHLRQHYKVHL 259
           C  C   F    HL  H K H 
Sbjct: 68  CQKCDRAFSRSDHLALHMKRHF 89

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
                        + Y C  C K F  + +L  H +  H   + ++C  CGKAF   +++
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 140 KVHMRIHTGEKKY 152
             H R+HTG    
Sbjct: 63  IGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.5 bits (135), Expect = 1e-10
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           ++C  CGK+F+  +++  H R HTGEK Y C+ CG +F     L  H   HT
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.1 bits (108), Expect = 6e-07
 Identities = 25/100 (25%), Positives = 33/100 (33%), Gaps = 30/100 (30%)

Query: 138 NMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNT-YKNPKALTS 196
           +           ++Y C+ CG SF+    L+ H  +HT         G   YK       
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT---------GEKPYK------- 48

Query: 197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF 236
                        CD CGK F  +  L  H  VHT   P 
Sbjct: 49  -------------CDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           CD CGK F     L +H   HT ++P+ C+ C   F  + HL  H++VH
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHS 171
             C VC +AFA   ++K H R HT EK Y C  C  +F     L  H+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 93  KEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHM-RIHTGEK 150
           + + C +C + F R  +L  H +  H N + + C +C +AF     +  H  +IH+G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHY-KVH 258
           C+VC + F  +  LK H   HT ++P+ C +C   F  +  L +H  K+H
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 5/84 (5%)

Query: 124 HQCSV--CGKAFADITNMKVHMRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHT-NTQ 178
           + C    CGKAF     +KVH   HT +  Y C  E C   F+L   L  H   H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 179 FVCSYCGNTYKNPKALTSHIRNSH 202
                C    K       H+   H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 95  YCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSV--CGKAFADITNMKVHMRIHTGEK 150
           Y CH   C K F ++  L  H    H     ++C    C K F+  + +K H ++H G  
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 151 KYVCETCGASFALWGSLNVH 170
               ++C      W     H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 213 CGKEFRMKRQLKEHMAVHTTDRPFVCN--MCPSTFKLKKHLRQHYKVH 258
           CGK F+   QLK H   HT   P+ C    C   F L   L++H KVH
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 55.0 bits (132), Expect = 3e-10
 Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 8/75 (10%)

Query: 88  IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQ--------CSVCGKAFADITNM 139
           I   +       C + F     LV H+   H    E          C   GK+F     +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 140 KVHMRIHTGEKKYVC 154
             H+R+HTGEK    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 8/69 (11%)

Query: 178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVC--------GKEFRMKRQLKEHMAV 229
                 C  T+     L +H+   H    +    VC        GK F+ K +L  H+ V
Sbjct: 25  SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84

Query: 230 HTTDRPFVC 238
           HT ++    
Sbjct: 85  HTGEKSGPS 93

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 88  IHNVEKEYCCHICKKVFLRNRNLVCHIK-AVHENVREHQCSVCGKAFADITNMKVHMRIH 146
               E  Y C +C +V+    N   H   +   NV+ + C  C K F    NM  H++I 
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 147 TG 148
             
Sbjct: 64  HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 114 IKAVHENVREHQCSVCGKAFADITNMKVHMRI--HTGEKKYVCETCGASFALWGSLNVHS 171
           ++   E    ++C VC + +  I+N   H         K Y C  C   F    ++  H 
Sbjct: 1   MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 172 YSHT 175
               
Sbjct: 61  KIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 210 CDVCGKEFRMKRQLKEHM--AVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM 261
           C VC + +        H   +     + + C  C   F  K ++  H K+  K+
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ---FVCSYCGNTYKNPKALTSHIRN 200
               GE  Y C+ C   +    +   H  +        + C +C   +     +T+H++ 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 201 SHTI 204
            H I
Sbjct: 63  IHKI 66

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.8 bits (120), Expect = 6e-09
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKY 152
           + C +CG  F  +  +K H+RIHTG    
Sbjct: 12  YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GEK Y CE CG  F    +L  H   HT
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPF 236
           C++CG  FR  + LK H+ +HT   P 
Sbjct: 14  CEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.9 bits (120), Expect = 6e-09
 Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 114 IKAVHENVREHQCSVCGKAFADITNMKVHM-RIHTGEKKYVCETCGASFA 162
             +     + + C  CGK F+   ++  H+ ++HT E+ + C+   +  +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.5 bits (119), Expect = 8e-09
 Identities = 19/52 (36%), Positives = 24/52 (46%)

Query: 84  SHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFAD 135
           S     +V K Y C  C K F R  +L  HIK VH + R H+C V     + 
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 201 SHTIHQKSICDVCGKEFRMKRQLKEHM-AVHTTDRPFVCNMCPSTF 245
           S ++ +  IC  CGK F     L  H+  VHT++RP  C +  S  
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.2 bits (114), Expect = 3e-08
 Identities = 17/52 (32%), Positives = 23/52 (44%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           + C  CG      + +K H+R HT  + Y C  C  SF   G+L  H  S  
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 95  YCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKK 151
           Y C  C     +   L  HI+  H +VR + C+ C  +F    N+  HM+     KK
Sbjct: 2   YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 5e-06
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           C+ CG   +    LK+H+  HT  RP+ C  C  +FK K +L +H K  
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.6 bits (84), Expect = 5e-04
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
           +++C  CG   K P  L  HIR +HT  +   C  C   F+ K  L +HM    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 48.5 bits (116), Expect = 3e-08
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 118 HENVREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVC--ETCGASFALWGSLNVHSYS 173
              +R H CS   CGK +   +++K H R HTGEK + C  + C   FA    L+ H  +
Sbjct: 12  SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

Query: 174 H 174
           H
Sbjct: 72  H 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 195 TSHIRNSHTIHQKS---ICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCNM--CPSTFKL 247
           +S          +    IC    CGK +     LK H   HT ++PF C+   C   F  
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 248 KKHLRQHYKVH 258
              L +H + H
Sbjct: 62  SDELSRHRRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           C + F+    +  H+RIHTG+K + C  C  +F+    L  H  +HT
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 196 SHIRNSHTIHQKS-ICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR 252
           +++ N      +   C V  C + F    +L  H+ +HT  +PF C +C   F    HL 
Sbjct: 7   NNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 253 QHYKVH 258
            H + H
Sbjct: 67  THIRTH 72

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 47.2 bits (112), Expect = 6e-08
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETC 157
           ++  C +CGK F D+ ++  H   H+GEK Y     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 209 ICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC 241
            C++CGK FR    L  H   H+ ++P+     
Sbjct: 14  ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C+ CGKAF D +N+  H +IHTGEK     +
Sbjct: 13  YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F    +L  H   HT
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT 36

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 13/75 (17%), Positives = 21/75 (28%), Gaps = 8/75 (10%)

Query: 78  SYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADIT 137
           S         IH  ++   C  C  +F+R   L           +   C  C K      
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEA 53

Query: 138 NMKVHMRIHTGEKKY 152
            +       +G+K  
Sbjct: 54  ALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 12/100 (12%), Positives = 27/100 (27%), Gaps = 35/100 (35%)

Query: 137 TNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTS 196
            +     +IH G++   C  CG  F                                   
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIR--------------------------------- 30

Query: 197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF 236
             R++ +  +  +C+ C K+   +  L +     +  +  
Sbjct: 31  --RSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
             CS C KAF+  + + VH + H  EK     +
Sbjct: 11  FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 47.2 bits (111), Expect = 2e-07
 Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 4/85 (4%)

Query: 170 HSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAV 229
            S       + C  C     +     SH R        ++C  C   F      +EH + 
Sbjct: 8   ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSPELKQEHES- 63

Query: 230 HTTDRPFVCNMCPSTFKLKKHLRQH 254
               +   C  C  TFK    + +H
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.4 bits (101), Expect = 6e-06
 Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 119 ENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQ 178
           EN   +QC +C    + +     H R+       VC  C   F        H       +
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKK 69

Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICD 211
             C  C  T+K+  ++  H    H  +  +   
Sbjct: 70  LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS 102

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +   + + HQC  CG+ F   +++  H RIHTGEK     +
Sbjct: 4   GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 11/34 (32%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +  K + C  CG  F L   LN H   HT
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
             +  ++ +   C+ C   F LK HL QH ++H
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           + C+VCGKAF D +N+  H +IHTGEK    
Sbjct: 13  YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGE+ Y+C  CG +F    +L  H   HT
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT 36

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +  E  + +QCS CGK+F+    +  H   HT EK    
Sbjct: 4   GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GEK Y C  CG SF+    L  H  +HT
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +CS C KAF   +N+ VH R HTGEK     +
Sbjct: 13  FECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C  C  +F    +L VH  +HT
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT 36

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           + C+VCGKAF    ++  H+R+HT E      +
Sbjct: 13  YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F L   LN H   HT
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +C+ CGK+F+  + +  H RIHTGEK     +
Sbjct: 13  FECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C  CG SF++   L  H   HT
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT 36

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           + CS CGKAF+  + + +HMR H+GEK     +
Sbjct: 13  YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GEK Y C  CG +F+    L +H  +H+
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 4e-07
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +C+ CGKAF   + + +H R H  +K    
Sbjct: 13  CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK   C  CG +F     L +H  +H 
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV 36

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
             C  CGKAF+D   +  H RIHTGEK     +
Sbjct: 13  FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C  CG +F+    LN H   HT
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 16/33 (48%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           H+CS CGK F   +N   H RIHTGEK     +
Sbjct: 13  HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GE+ + C  CG  F    +   H   HT
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           + C+ CGKAF   + + +H R HTGE     
Sbjct: 13  YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG K YVC  CG +F     L +H+ +HT
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT 36

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C  C K F  I ++  H R+HTGE+     
Sbjct: 13  YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +G+K Y C+ C  +F   G LN H   HT
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++CS CGK+F   + + VH RIHTGE      +
Sbjct: 13  YECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 15/35 (42%), Positives = 16/35 (45%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGEK Y C  CG SF     L+VH   HT
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++CS+CGK+F   + + VH +IHTGEK     +
Sbjct: 13  YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 15/35 (42%), Positives = 16/35 (45%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGEK Y C  CG SF     L+VH   HT
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT 36

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           + C+ CGKAF   +N+  H +IHT +K     +
Sbjct: 13  YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y+C  CG +F +  +L  H   HT
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT 36

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++CS CGKAF   + + +H + HTGE+    
Sbjct: 13  YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F     L++H  SHT
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++CS CGKAFA  + + +H RIHTGEK     +
Sbjct: 13  YECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGE+ Y C  CG +FA   +L +H   HT
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHT 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKY 152
           ++C  CG  F  + +++ H+ IHTG    
Sbjct: 12  YKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/34 (44%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GEK Y CETCGA F     L  H   HT
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           CSVCGKAF+   ++ VH RIH+G+K     +
Sbjct: 15  CSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGEK Y C  CG +F+   SL+VH   H+
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           C +CGK+F   + +  H  +HT EK     +
Sbjct: 15  CDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGEK + C+ CG SF     LN HS  HT
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           + CS C K F+  + + VH R HTG K     +
Sbjct: 13  YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG K Y C  C  +F+L   L VH  SHT
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT 36

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
             CS CGK F   TN+ +H +IHTGE+    
Sbjct: 13  FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGE  ++C  CG  F    +L +H   HT
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT 36

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C VC KAF    ++  H + HTGEK     
Sbjct: 13  YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C+ C  +F     L  H  +HT
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           + C  CGKAF   + ++ H RIHTGEK     +
Sbjct: 13  YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y CE CG +F     L  H   HT
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT 36

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           H C  CGK F  I+ +++H R+H GEK     +
Sbjct: 13  HTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK + C+ CG +F    +L +H   H 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GEK Y C+ CG +F+  GSL VH   HT
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKY 152
           ++C  CGKAF+   ++ VH+R+HTG    
Sbjct: 12  YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C+ CGKAF   +N+  H  IHTGEK     
Sbjct: 13  YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F    +L  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT 36

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C VC KAF+   ++  H R+H+GEK     
Sbjct: 13  YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGEK Y C+ C  +F+   SL  H   H+
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.0 bits (105), Expect = 8e-07
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C+ C KAF   +N+ VH R HTGE     
Sbjct: 13  YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGEK Y C  C  +F    +L VH  +HT
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT 36

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.0 bits (105), Expect = 8e-07
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++CS CGKAF     +  H R H GE     
Sbjct: 11  YECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
              +GE  Y C  CG +F     L  H  +H 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 8e-07
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C VC K+F   +++ VH RIHTGEK    
Sbjct: 13  YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C+ C  SF    SL VH   HT
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT 36

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 8e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C  CGK F    ++  H  +HTGEK     +
Sbjct: 13  YKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 14/34 (41%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y CE CG  F     L  H   HT
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT 36

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 8e-07
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C  CGK +    N+ +H R+H GEK     +
Sbjct: 13  YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                + EK Y CE CG  +    +L++H   H 
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCG 158
            +C  CGK F   +    H R H+GEK       G
Sbjct: 13  FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK + CE CG  F        H  SH+
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.1 bits (108), Expect = 9e-07
 Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 6/125 (4%)

Query: 80  SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
           SG K +L  H   K    H+  +   R   L    K +   +   +  +      D ++ 
Sbjct: 8   SGSKKYLSNH---KGIFIHVTLEELKRYHQLTPEQKRLIRAIV--KTLIHNPQLLDESSY 62

Query: 140 KVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIR 199
              +       ++VC  C   F+   SL  H     +T  VC  C   + +  +   H+ 
Sbjct: 63  LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT-KVCPVCKKEFTSTDSALDHVC 121

Query: 200 NSHTI 204
             H I
Sbjct: 122 KKHNI 126

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++CS CGKAF   + + +H RIH GEK    
Sbjct: 13  YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGE+ Y C  CG +F    +L++H   H 
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR 36

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C  CGKAF D ++   H R+HTG++     
Sbjct: 13  YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F    S   H   HT
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++CS C K+F+    + VH R+HT EK    
Sbjct: 13  YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 11/34 (32%), Positives = 12/34 (35%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 G   Y C  C  SF+    L VH   HT
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGKAF   +++  H R HTGEK    
Sbjct: 13  YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG++ Y C  CG +F    SL  H  SHT
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT 36

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           + C  CGK+F   + +  H R+H+GEK     
Sbjct: 13  YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C+ CG SF     L  H   H+
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           +C+ CGK+F    N+  H RIHTGEK    
Sbjct: 14  ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG+K + C  CG SF   G+L  H   HT
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT 36

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGKAFA   N+  H RIHTGEK    
Sbjct: 13  YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +FA   +L  H   HT
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT 36

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +C  CGKAF    ++  H+RIHTGEK     +
Sbjct: 13  FKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK + C+ CG +F     L  H   HT
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT 36

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
            +C+ CGKAF   + + +H +IHTGEK     
Sbjct: 13  FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG K + C  CG +F    +L++H   HT
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT 36

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            C  CGKAF     +  H RIHTGEK    
Sbjct: 14  VCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK YVC+ CG +F L   L  H   HT
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT 36

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +C  C   F+  +++++H  +H GEK    
Sbjct: 13  WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GEK + C  C   F+   SL +H   H 
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV 36

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++CS CGK+F   + +++H + HTGE+    
Sbjct: 13  YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG SF     L +H   HT
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           H+C  CGK+F+  + + VH RIHTGE     
Sbjct: 13  HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C  CG SF+    L VH   HT
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT 36

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           + C+ CGKAF+  +++  H  IHTGEK     
Sbjct: 13  YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG K Y+C  CG +F+++ SL  H   HT
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT 36

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGK +    ++  H R+HTGEK    
Sbjct: 13  YKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK Y C  CG  +     L+ H   HT
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGK +    N+ +H ++HTGE+    
Sbjct: 13  YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 7e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y CE CG  +    +L++H   HT
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           +QC+ CGKAF+  + +  H R+HTGEK     +
Sbjct: 13  YQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TG K Y C  CG +F+    L  H   HT
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT 36

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           +C VCGKAF   +++  H  +H+GE+     +
Sbjct: 14  KCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C+ CG +F +   L  H   H+
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKY 152
           + C  CGK+F    ++ VH R  +     
Sbjct: 12  YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 GE  Y+C  CG SF   GSL VH  S +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           + C+ CGK F+  + +  H R HTGEK     
Sbjct: 13  YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 +GEK Y C  CG +F+    L+ H  +HT
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT 36

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C+ CGKAF   +++ +H   H+GEK    
Sbjct: 13  YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F    SL +H  +H+
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS 36

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +     R  +C+ CGK F   +++  H+R+H+ EK     +
Sbjct: 4   GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GE+ + C  CG  F     L  H   H+
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           + C+ CGK+F   +++  H RIHTGEK     
Sbjct: 13  YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y+C  CG SF     LN H   HT
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT 36

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGKAF+    +  H R H GEK    
Sbjct: 13  YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TGE  Y C  CG +F+    L  H  +H 
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHA 36

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           +C VCGK F+  ++++ H R+HTGEK     +
Sbjct: 14  KCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                  GEK Y C+ CG  F+    L  H   HT
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT 36

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C  CGK F   +++  H  IHTGEK     +
Sbjct: 13  YKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 8e-05
 Identities = 13/34 (38%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG  F     L  H   HT
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT 36

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +C  CGK F+  + + VH ++HTGEK     +
Sbjct: 13  FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C  CG  F+   +LNVH   HT
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C+ CGKAF+  +++  H  IHTG+K     
Sbjct: 13  YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F++  SL  H   HT
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +C+ C K F   +++ VH RIHTGEK    
Sbjct: 13  FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 G+K + C  C  +F    SL VH   HT
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           + C  CGK+F+    +  H R+H+GEK    
Sbjct: 13  YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C+ CG SF+    L  H   H+
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            +     R + C+ CGK F   +++  H++ H  EK     +
Sbjct: 4   GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GE+ Y C  CG +F     L  H   H 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C+ CGK F+  + +  H +IHTGEK     +
Sbjct: 13  YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK+Y C  CG  F+    L+ H   HT
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGKAF+  T++  H R+HTGEK    
Sbjct: 13  YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C+ CG +F+    L  H   HT
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT 36

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           +C+ CGK F   +++  H RIHTG K     +
Sbjct: 14  KCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 13/34 (38%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG  F     L  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT 36

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C+ CGKAF+  + +  H RIHTGEK     +
Sbjct: 13  YKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG +F+    L  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT 36

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKY 152
           ++C  CGK+F    ++ +H RIHTG    
Sbjct: 11  YECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++CS CGKAF   T++  H RIHTG +     
Sbjct: 13  YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK Y C  CG +F     LN H   HT
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C+ CG +F+   SL  H  SH 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            QC  CG  F+   ++  H+R H         +
Sbjct: 13  FQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           ++C+ CGK F   + +  H RIHTGEK     
Sbjct: 13  YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG  F     L+ H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT 36

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C+ CGKAF   + + VH R H G      
Sbjct: 13  YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK Y C  CG +F     L VH  +H 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +C  CGK F   + +  H R+HTGEK    
Sbjct: 13  FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK + CE CG  F     L+ H   HT
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT 36

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           ++C  CGK F+    +  H + H+G+     
Sbjct: 13  YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGE  Y C  CG  F+    L  H  +H+
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
            QC  CGK F   +++  H R+HTGEK     +
Sbjct: 13  FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK + CE CG  F     L+ H   HT
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT 36

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
            +C  CGK++    ++  H R+HTGEK    
Sbjct: 13  FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK + C  CG S+     L  H   HT
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           +C+ CGK F   +++  H  IHTGEK     +
Sbjct: 14  KCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 9e-05
 Identities = 13/34 (38%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG  F     L  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT 36

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           H+C+ CGK+F    ++  H RIHTGEK     
Sbjct: 13  HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGE+ + C  CG SF     L  H   HT
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT 36

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           +C+ CGK F   +++  H RIHTGEK    
Sbjct: 14  KCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 12/34 (35%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                +GEK Y C  CG  F     L  H   HT
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           +C+ CGK F   +++  H  IHTGEK     +
Sbjct: 14  KCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG  F     L  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT 36

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVCET 156
           ++C+ CGK F   +++  H R+HTG K     +
Sbjct: 13  YKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/34 (38%), Positives = 13/34 (38%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                TGEK Y C  CG  F     L  H   HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT 36

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 125 QCSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
           +C+ CGK F   +++  H  IHTGEK     
Sbjct: 14  KCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 13/35 (37%)

Query: 141 VHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                 TG+K Y C  CG  F     L  H   HT
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT 36

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 117 VHENVREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCET 156
                +   C+   CG  F+    +  H R H+G K     +
Sbjct: 6   SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)

Query: 142 HMRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTNTQ-FVCS 182
                TGEK + C    CG  F+    L+ H  SH+  +    S
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 124 HQCSVCGKAFADITNMKVHMR-IHTGEKKYVC 154
           ++C  CGKAF   T++  H R  HTGEK    
Sbjct: 13  YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVH 170
                TG+K Y C  CG +F    SL  H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 11/34 (32%), Positives = 12/34 (35%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                T  K Y C  CG +F     L  H   HT
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           + C+ CGKAF  I ++  H +IHT +     
Sbjct: 13  YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 225 EHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
              +  T  + + CN C   F    HL +H K+H
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 7/31 (22%), Positives = 15/31 (48%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEKKYVC 154
           + C+ C + F+D   +  H ++HT +     
Sbjct: 11  YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	262
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.97
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.95
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.87
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.87
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.84
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.83
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.83
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.79
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.73
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.71
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.71
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.71
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.71
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.69
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.68
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.66
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.65
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.62
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.62
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.61
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.61
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.55
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.55
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.53
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.52
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.49
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.43
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.43
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.42
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.41
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.41
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.41
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.4
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.39
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.38
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.36
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.32
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.32
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.31
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.3
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.27
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.27
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.26
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.25
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.24
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.24
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.23
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.22
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.2
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.19
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.19
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.18
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.14
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.08
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.02
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.01
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.0
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.0
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.97
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.97
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.97
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.95
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.93
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.91
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.91
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.88
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.88
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.88
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.87
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.86
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.83
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.82
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.8
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.8
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.79
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.78
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.77
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.75
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.75
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.74
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.73
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.73
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.72
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.72
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.71
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.12
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.67
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.11
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.64
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.64
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.64
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.63
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.61
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.61
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.6
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.58
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.58
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.57
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.56
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.55
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.54
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.52
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.51
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.47
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.85
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.46
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.45
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.45
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.42
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.4
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.75
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.33
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.31
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.57
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.1
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.07
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.81
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.15
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.1
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.1
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.8
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.75
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.7
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.16
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.6
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.47
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.49
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	90.52
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.5
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.02
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	88.4
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	86.03
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.16
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.87
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	84.81
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.43
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	83.89
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	82.63
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	82.54
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	82.43
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	81.81
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	80.92

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.5e-43  Score=268.01  Aligned_cols=181  Identities=33%  Similarity=0.665  Sum_probs=113.8

Q ss_pred             hHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccc
Q psy11589         80 SGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGA  159 (262)
Q Consensus        80 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  159 (262)
                      ..|..|+..+.++++|.|+.|++.|.+...|..| ...|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             ------------------------CCSSHHHHHG-GGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHH-HHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            3455566666666666666666666666666666 345556666666666666666666666666666666677777777


Q ss_pred             cccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        160 SFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       160 ~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      .|.+...|..|++.|.+ ++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  164 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC  164 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeEC
Confidence            77777777777776665 67777778888888888888877 67778888888888888888888888888888888888


Q ss_pred             CCCCcccCChHHHHHHHHhhccCC
Q psy11589        239 NMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       239 ~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ++|++.|.+...|..|+++|+|++
T Consensus       165 ~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          165 PECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             TTTCCEESSHHHHHHHHTTC----
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCC
Confidence            888888888888888888888764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.4e-42  Score=260.65  Aligned_cols=180  Identities=31%  Similarity=0.628  Sum_probs=146.1

Q ss_pred             ccccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCcccccccc
Q psy11589         55 AIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFA  134 (262)
Q Consensus        55 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~  134 (262)
                      ..|+..+.++++|.|+.|++.|.+...|..|++.|.++.+|.|+.|++.|.+...|..|+ ..|.++++|.|+.|++.|.
T Consensus        10 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~   88 (190)
T 2i13_A           10 VAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFS   88 (190)
T ss_dssp             ---------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEES
T ss_pred             hhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccC
Confidence            456667788899999999999999999999999999999999999999999999999995 5788899999999999999


Q ss_pred             CchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCccccccc
Q psy11589        135 DITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVC  213 (262)
Q Consensus       135 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  213 (262)
                      +...|..|+++|.++++|.|+.|++.|.+...|..|+++|.+ ++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus        89 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C  167 (190)
T 2i13_A           89 QRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR-THTGEKPYKCPEC  167 (190)
T ss_dssp             CHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTT
T ss_pred             CHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH-hcCCCCCeECCCC
Confidence            999999999999999999999999999999999999999987 89999999999999999999999 8999999999999


Q ss_pred             ccccCChHHHHHHHHhhCCCCCc
Q psy11589        214 GKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       214 ~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      ++.|.++..|..|+++|+|++||
T Consensus       168 ~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          168 GKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             CCEESSHHHHHHHHTTC------
T ss_pred             CCccCCHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=6.6e-36  Score=226.05  Aligned_cols=165  Identities=28%  Similarity=0.542  Sum_probs=134.1

Q ss_pred             CCeeec--CcchhhccChhHHHHHHHHhhcCCCcccC--ccccccccCchhHHhHHhhhCCCCccccC--cccccccCcc
Q psy11589         92 EKEYCC--HICKKVFLRNRNLVCHIKAVHENVREHQC--SVCGKAFADITNMKVHMRIHTGEKKYVCE--TCGASFALWG  165 (262)
Q Consensus        92 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~  165 (262)
                      .++|.|  +.|++.|.+...|..|+ ..|.++++|.|  +.|++.|.+...|..|+++|.++++|.|+  .|++.|.+..
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            455666  45666666666677773 35666677777  66777777777777777777777778887  7888888888


Q ss_pred             hHHHHH-hhcC-C-CcccC--CcchhcCCCChHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhCCCCCccC
Q psy11589        166 SLNVHS-YSHT-N-TQFVC--SYCGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       166 ~l~~H~-~~h~-~-~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      .|..|+ +.|. + ++|.|  +.|++.|.+.+.|..|++ .|.+++||.|++  |++.|.+.+.|..|+++|++   |.|
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C  164 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC  164 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCC
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcC
Confidence            888887 4552 2 68999  889999999999999998 799999999988  99999999999999999988   899


Q ss_pred             CC---CCcccCChHHHHHHHHhhccC
Q psy11589        239 NM---CPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       239 ~~---C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +.   |++.|.+...|..|+++|+||
T Consensus       165 ~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          165 KKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CCCCcCCCccccHHHHHHHHHhhcCC
Confidence            99   999999999999999999885

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=1.9e-34  Score=217.97  Aligned_cols=167  Identities=29%  Similarity=0.514  Sum_probs=153.8

Q ss_pred             CCccceec--CCCcccccchhHHHhhhhhcCCCCeeec--CcchhhccChhHHHHHHHHhhcCCCcccCc--cccccccC
Q psy11589         62 NKKVSYKC--PDCSVIVVSYSGFKSHLDIHNVEKEYCC--HICKKVFLRNRNLVCHIKAVHENVREHQCS--VCGKAFAD  135 (262)
Q Consensus        62 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~  135 (262)
                      ...++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+ ..|.++++|.|+  .|++.|.+
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESC
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCC
Confidence            34678999  7899999999999999999999999999  88999999999999995 679999999999  89999999


Q ss_pred             chhHHhHH-hhh-CCCCcccc--CcccccccCcchHHHHHhhcCC-CcccCCc--chhcCCCChHHHHHHHhhcCCCCcc
Q psy11589        136 ITNMKVHM-RIH-TGEKKYVC--ETCGASFALWGSLNVHSYSHTN-TQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKS  208 (262)
Q Consensus       136 ~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~  208 (262)
                      ...|..|+ +.| .++.+|.|  +.|++.|.+...|..|+++|++ ++|.|++  |++.|.+.+.|..|++ .|++   |
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~---~  162 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---Y  162 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT-SSCS---C
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHH-HhCC---C
Confidence            99999999 566 36789999  9999999999999999999998 8999988  9999999999999999 7887   9


Q ss_pred             cccc---cccccCChHHHHHHHHhhCCC
Q psy11589        209 ICDV---CGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       209 ~C~~---C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      .|+.   |++.|.+...|..|+++|+++
T Consensus       163 ~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          163 PCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             cCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9999   999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=2.8e-31  Score=194.05  Aligned_cols=136  Identities=27%  Similarity=0.567  Sum_probs=106.9

Q ss_pred             ccCccccccccCchhHHhHHh---hhCCCCccc-----cCcccccccCcchHHHHHhhcCC-CcccCCc--chhcCCCCh
Q psy11589        124 HQCSVCGKAFADITNMKVHMR---IHTGEKKYV-----CETCGASFALWGSLNVHSYSHTN-TQFVCSY--CGNTYKNPK  192 (262)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~-----C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~  192 (262)
                      |.|+.|++.|.+...|..|++   +|.++++|.     |+.|++.|.+...|..|+++|.+ ++|.|++  |++.|.+..
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            344444444444444444443   233444444     44556888888888888888876 7899985  999999999


Q ss_pred             HHHHHHHhhcCCCCcccccc--cccccCChHHHHHHH-HhhCCCCCccCCC--CCcccCChHHHHHHHHhhcc
Q psy11589        193 ALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHM-AVHTTDRPFVCNM--CPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       193 ~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~  260 (262)
                      .|..|++ .|.++++|.|++  |++.|.+...|..|+ ++|.+++||.|++  |++.|.+.+.|..|+++|+|
T Consensus        84 ~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           84 NLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999998 799999999998  999999999999998 7899999999988  99999999999999999876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=1e-30  Score=191.08  Aligned_cols=143  Identities=28%  Similarity=0.533  Sum_probs=114.1

Q ss_pred             ceecCCCcccccchhHHHhhhh---hcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhH
Q psy11589         66 SYKCPDCSVIVVSYSGFKSHLD---IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVH  142 (262)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  142 (262)
                      +|.|+.|++.|.+...|..|++   .|.++++|.|++|+                        |..|++.|.+...|..|
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~------------------------C~~c~~~f~~~~~l~~H   58 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------------CSRELRPFKAQYMLVVH   58 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT------------------------CTTTTCCCSSHHHHHHH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC------------------------ccchhhhhhhHHHHHHH
Confidence            4556666666666666666665   34455555555442                        45556888888888888


Q ss_pred             HhhhCCCCccccCc--ccccccCcchHHHHHhhcCC-CcccCCc--chhcCCCChHHHHHHHhhcCCCCcccccc--ccc
Q psy11589        143 MRIHTGEKKYVCET--CGASFALWGSLNVHSYSHTN-TQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICDV--CGK  215 (262)
Q Consensus       143 ~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~  215 (262)
                      ++.|.++++|.|+.  |++.|.+...|..|+++|.+ ++|.|++  |++.|.+.+.|..|++..|+++++|.|++  |++
T Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~  138 (155)
T 2gli_A           59 MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK  138 (155)
T ss_dssp             THHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCC
T ss_pred             HHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcc
Confidence            88888888888975  99999998999999988877 7899998  99999999999999844899999999988  999


Q ss_pred             ccCChHHHHHHHHhhCC
Q psy11589        216 EFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       216 ~f~~~~~l~~H~~~h~~  232 (262)
                      .|.+.+.|..|+++|+|
T Consensus       139 ~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          139 RYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EESSHHHHHHHHHHSCC
T ss_pred             ccCCHHHHHHHHHhhcC
Confidence            99999999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.2e-27  Score=168.18  Aligned_cols=114  Identities=32%  Similarity=0.587  Sum_probs=90.3

Q ss_pred             CCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHh--hcCCCCcccccccccccCChHHHH
Q psy11589        148 GEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRN--SHTIHQKSICDVCGKEFRMKRQLK  224 (262)
Q Consensus       148 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~C~~C~~~f~~~~~l~  224 (262)
                      ++++|.|+.|++.|.+...|..|+++|.+ ++|.|+.|++.|.+...|..|++.  .|.++++|.|++|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            45566666666666666666666666665 567777777777777777777763  256788999999999999999999


Q ss_pred             HHHHhhCCCCCccCCCCCcccCChHHHHHHHH-hhccC
Q psy11589        225 EHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYK-VHLKM  261 (262)
Q Consensus       225 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~  261 (262)
                      .|+++|++++||.|++|++.|.+...|..|++ .|.++
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999999999999999987 56665

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.94  E-value=2.5e-27  Score=166.46  Aligned_cols=113  Identities=29%  Similarity=0.600  Sum_probs=96.8

Q ss_pred             CCccccC--cccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccc--cccccCChHHHH
Q psy11589        149 EKKYVCE--TCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLK  224 (262)
Q Consensus       149 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~  224 (262)
                      +++|.|+  .|++.|.+...|..|+++|..++|.|+.|++.|.+...|..|++ .|.++++|.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4578888  78888888888888888885578999999999999999999988 788999999986  999999999999


Q ss_pred             HHHHhhCCCCCccCC--CCCcccCChHHHHHHHHhhccCC
Q psy11589        225 EHMAVHTTDRPFVCN--MCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       225 ~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|+++|++++||.|+  .|++.|.+.+.|..|+++|++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            999999999999996  49999999999999999998874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=1.6e-28  Score=173.62  Aligned_cols=108  Identities=23%  Similarity=0.384  Sum_probs=95.0

Q ss_pred             HhHHhhhCCCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccC
Q psy11589        140 KVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFR  218 (262)
Q Consensus       140 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  218 (262)
                      ..|..+|.|+++|.|++|++.|.+...|..|+++|.+ +||.|++|++.|.+.+.|..|++ +|++++||.|++||+.|.
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI-HHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHH-HHHTCCCEEESSSCCEES
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcc-ccCCCccccCCCCCCCcC
Confidence            4456678888899999999999999999999998877 78999999999999999999998 799999999999999999


Q ss_pred             ChHHHHHHHHhhCCCC------CccCCCCCcccCCh
Q psy11589        219 MKRQLKEHMAVHTTDR------PFVCNMCPSTFKLK  248 (262)
Q Consensus       219 ~~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~  248 (262)
                      +.+.|..|+++|++++      +|+|..|++.|...
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            9999999999988764      58999999988644

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=2.4e-27  Score=165.35  Aligned_cols=111  Identities=27%  Similarity=0.621  Sum_probs=97.0

Q ss_pred             CCCCccccCc--ccccccCcchHHHHHhhcCC-CcccCC--cchhcCCCChHHHHHHHhhcCCCCcccccccccccCChH
Q psy11589        147 TGEKKYVCET--CGASFALWGSLNVHSYSHTN-TQFVCS--YCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKR  221 (262)
Q Consensus       147 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~  221 (262)
                      .++++|.|+.  |++.|.+...|..|++.|.+ ++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHH
Confidence            3566777775  77777777777777777765 678888  69999999999999988 788899999999999999999


Q ss_pred             HHHHHHHhhCCCCCccC--CCCCcccCChHHHHHHHHhh
Q psy11589        222 QLKEHMAVHTTDRPFVC--NMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       222 ~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H  258 (262)
                      .|..|+++|++++||.|  +.||+.|.+...|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=7e-26  Score=159.02  Aligned_cols=115  Identities=31%  Similarity=0.586  Sum_probs=98.3

Q ss_pred             cCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhc---CC-CcccCCcchhcCCCChHH
Q psy11589        119 ENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSH---TN-TQFVCSYCGNTYKNPKAL  194 (262)
Q Consensus       119 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~-~~~~C~~C~~~f~~~~~l  194 (262)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.+   .+ ++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            35677888888888888888888888888888888888888888888888888753   33 789999999999999999


Q ss_pred             HHHHHhhcCCCCcccccccccccCChHHHHHHHH-hhCCCC
Q psy11589        195 TSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMA-VHTTDR  234 (262)
Q Consensus       195 ~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  234 (262)
                      ..|++ .|.+++||.|++|++.|.+...|..|++ .|.++.
T Consensus        83 ~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHH-HHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHH-HcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            99998 7999999999999999999999999987 576653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.93  E-value=3.3e-26  Score=167.09  Aligned_cols=117  Identities=27%  Similarity=0.525  Sum_probs=67.9

Q ss_pred             CcccCccccccccCchhHHhHHhh-hCCCCc--------cccCcccccccCcchHHHHHhhcCC-CcccCCc--chhcCC
Q psy11589        122 REHQCSVCGKAFADITNMKVHMRI-HTGEKK--------YVCETCGASFALWGSLNVHSYSHTN-TQFVCSY--CGNTYK  189 (262)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~  189 (262)
                      .+|.|..|++.|.+...|..|++. |.++.+        |.|+.|++.|.+...|..|+++|.+ ++|.|++  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            344444444444444444444444 332222        4555555555555555555555554 5566655  666666


Q ss_pred             CChHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        190 NPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       190 ~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      +...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++++||.|+
T Consensus       104 ~~~~L~~H~~-~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHT-TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHH-hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            6666666666 566666666665  666666666666666666666666664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=4.4e-26  Score=160.11  Aligned_cols=115  Identities=31%  Similarity=0.639  Sum_probs=89.6

Q ss_pred             CCcccCc--cccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhcCC-CcccCCc--chhcCCCChHHH
Q psy11589        121 VREHQCS--VCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSY--CGNTYKNPKALT  195 (262)
Q Consensus       121 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~l~  195 (262)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|+.|++.|.+...|..|+++|.+ ++|.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4567787  7888888888888888777 67778888888888888888888888776 6888875  888888888899


Q ss_pred             HHHHhhcCCCCccccc--ccccccCChHHHHHHHHhhCCCCCcc
Q psy11589        196 SHIRNSHTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDRPFV  237 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  237 (262)
                      .|++ .|.++++|.|+  .|++.|.+.+.|..|+++|+++++++
T Consensus        82 ~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHH-HHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHH-HhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            9988 78888899995  49999999999999999998888763

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=6.9e-26  Score=165.35  Aligned_cols=115  Identities=28%  Similarity=0.495  Sum_probs=107.5

Q ss_pred             CCCCccccCcccccccCcchHHHHHhh-cCCC-c--------ccCCcchhcCCCChHHHHHHHhhcCCCCcccccc--cc
Q psy11589        147 TGEKKYVCETCGASFALWGSLNVHSYS-HTNT-Q--------FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDV--CG  214 (262)
Q Consensus       147 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~  214 (262)
                      ..+.+|.|+.|++.|.+...|..|++. |.+. +        |.|+.|++.|.+...|..|++ .|.++++|.|++  |+
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTTC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCCC
Confidence            346789999999999999999999998 6553 2        899999999999999999999 899999999998  99


Q ss_pred             cccCChHHHHHHHHhhCCCCCccCCC--CCcccCChHHHHHHHHhhccCC
Q psy11589        215 KEFRMKRQLKEHMAVHTTDRPFVCNM--CPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       215 ~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +.|.+...|..|+++|++++||.|++  |++.|.+...|..|+++|+|++
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k  149 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK  149 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999997  9999999999999999999975

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=7.7e-26  Score=157.66  Aligned_cols=111  Identities=31%  Similarity=0.649  Sum_probs=93.0

Q ss_pred             cCCCcccCcc--ccccccCchhHHhHHhhhCCCCccccC--cccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChH
Q psy11589        119 ENVREHQCSV--CGKAFADITNMKVHMRIHTGEKKYVCE--TCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKA  193 (262)
Q Consensus       119 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~  193 (262)
                      .++++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|.+ ++|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            3567788876  888888888888888888888888888  688888888888888888776 68888888888888888


Q ss_pred             HHHHHHhhcCCCCcccc--cccccccCChHHHHHHHHhh
Q psy11589        194 LTSHIRNSHTIHQKSIC--DVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       194 l~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  230 (262)
                      |..|++ .|.++++|.|  +.|++.|.+...|..|+++|
T Consensus        82 l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHH-HHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHH-HhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            888888 7888888999  78999999999999998876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=2.5e-25  Score=157.21  Aligned_cols=107  Identities=27%  Similarity=0.489  Sum_probs=91.4

Q ss_pred             ccccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCcccccccc
Q psy11589         55 AIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFA  134 (262)
Q Consensus        55 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~  134 (262)
                      ..+..+++|+++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.....|..| +.+|.++++|.|++|++.|.
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H-~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH-EIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHH-HHHHHTCCCEEESSSCCEES
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhh-ccccCCCccccCCCCCCCcC
Confidence            34456778999999999999999999999999999999999999999999999999999 56799999999999999999


Q ss_pred             CchhHHhHHhhhCCCCc------cccCccccccc
Q psy11589        135 DITNMKVHMRIHTGEKK------YVCETCGASFA  162 (262)
Q Consensus       135 ~~~~l~~H~~~h~~~~~------~~C~~C~~~f~  162 (262)
                      +...|..|+++|++++|      |.|..|++.|.
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            99999999999887755      44555554443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.87  E-value=5.4e-23  Score=133.41  Aligned_cols=82  Identities=30%  Similarity=0.707  Sum_probs=78.5

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHh
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      ||.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++||.|+.|++.|.+.+.|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            5889999999999999999999 799999999999999999999999999999999999999999999999999999999


Q ss_pred             hcc
Q psy11589        258 HLK  260 (262)
Q Consensus       258 H~~  260 (262)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            986

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.4e-22  Score=135.52  Aligned_cols=85  Identities=26%  Similarity=0.593  Sum_probs=77.3

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHH
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHT
T ss_pred             cCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            68899999999999999999988 78888999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCC
Q psy11589        257 VHLKME  262 (262)
Q Consensus       257 ~H~~~~  262 (262)
                      +|++++
T Consensus        86 ~h~~~~   91 (96)
T 2dmd_A           86 SHTGDS   91 (96)
T ss_dssp             TCCSCC
T ss_pred             HhcCCC
Confidence            998874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.87  E-value=3.6e-22  Score=136.06  Aligned_cols=85  Identities=31%  Similarity=0.752  Sum_probs=61.7

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHH
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            56777777777777777777776 57777777777777777777777777777777777777777777777777777777


Q ss_pred             hhccCC
Q psy11589        257 VHLKME  262 (262)
Q Consensus       257 ~H~~~~  262 (262)
                      +|++++
T Consensus        95 ~H~~~~  100 (106)
T 2ee8_A           95 LHMQTS  100 (106)
T ss_dssp             HTTSCC
T ss_pred             HhCCCC
Confidence            776653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.87  E-value=1.3e-22  Score=134.06  Aligned_cols=85  Identities=29%  Similarity=0.712  Sum_probs=78.9

Q ss_pred             CcccCC--cchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHH
Q psy11589        177 TQFVCS--YCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQH  254 (262)
Q Consensus       177 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  254 (262)
                      ++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|..|
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            688998  59999999999999998 799999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCC
Q psy11589        255 YKVHLKME  262 (262)
Q Consensus       255 ~~~H~~~~  262 (262)
                      +++|+|++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            99999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.85  E-value=3.5e-22  Score=120.15  Aligned_cols=58  Identities=29%  Similarity=0.588  Sum_probs=55.5

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |+||.|++||+.|.+.+.|..|+++|+|++||.|++||++|.+.++|..|+++|+||+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999999999999999999999999999999999999984

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=6.5e-23  Score=141.89  Aligned_cols=104  Identities=19%  Similarity=0.274  Sum_probs=74.7

Q ss_pred             CchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhh--cCC-Cc-ccCCcchhcC--CCChHHHHHHHhhcCCCCcc
Q psy11589        135 DITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYS--HTN-TQ-FVCSYCGNTY--KNPKALTSHIRNSHTIHQKS  208 (262)
Q Consensus       135 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~-~~-~~C~~C~~~f--~~~~~l~~H~~~~H~~~~~~  208 (262)
                      +...|..|+++|.++++|.|++|++.|.+...|..|++.  +.+ ++ +.|++|++.|  .....|..|++ .|.+++||
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~-~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG-KEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC-SCCCCSSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh-ccCCCcce
Confidence            345677788888888888888888888888888888876  443 33 3477777777  77777777776 67777777


Q ss_pred             cccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        209 ICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       209 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      .|++|++.|.+...|..|+++|+.......+
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            7777777777777777777776665544443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=2.9e-21  Score=131.53  Aligned_cols=91  Identities=25%  Similarity=0.557  Sum_probs=77.5

Q ss_pred             CCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHH
Q psy11589        148 GEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEH  226 (262)
Q Consensus       148 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  226 (262)
                      ++++|.|+.|++.|.+...|..|++.|.+ ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG-GSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH-HhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45678888888888888888888887776 68888888889988899999988 78888999999999999999999999


Q ss_pred             HHhhCCCCCccCC
Q psy11589        227 MAVHTTDRPFVCN  239 (262)
Q Consensus       227 ~~~h~~~~~~~C~  239 (262)
                      +++|++++||.++
T Consensus        93 ~~~H~~~~~~~~~  105 (106)
T 2ee8_A           93 KTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHTTSCCCCCCC
T ss_pred             HHHhCCCCCCcCC
Confidence            9999999988653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=2.8e-21  Score=128.88  Aligned_cols=84  Identities=30%  Similarity=0.648  Sum_probs=79.0

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCC--CCccCCCCCcccCChHHHHHH
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD--RPFVCNMCPSTFKLKKHLRQH  254 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~~H  254 (262)
                      ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|+++  +||.|++|++.|.+...|..|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            78999999999999999999999 799999999999999999999999999999987  999999999999999999999


Q ss_pred             HH-hhccC
Q psy11589        255 YK-VHLKM  261 (262)
Q Consensus       255 ~~-~H~~~  261 (262)
                      ++ .|.++
T Consensus        85 ~~~~H~~~   92 (95)
T 2yt9_A           85 IKQVHSGP   92 (95)
T ss_dssp             HHHTSCCC
T ss_pred             HHHhcCCC
Confidence            85 78775

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=4.4e-22  Score=137.67  Aligned_cols=98  Identities=20%  Similarity=0.273  Sum_probs=85.5

Q ss_pred             CcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhh--cCCCCccc-cccccccc--CChHHHHHHHHhhCCCCCc
Q psy11589        163 LWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNS--HTIHQKSI-CDVCGKEF--RMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       163 ~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~--H~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~  236 (262)
                      +...|..|+++|.+ ++|.|++|++.|.+...|..|++ .  |.+++++. |++|++.|  .....|..|+++|++++||
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            34567888988887 79999999999999999999998 6  66666654 99999988  8899999999999999999


Q ss_pred             cCCCCCcccCChHHHHHHHHhhccC
Q psy11589        237 VCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       237 ~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      .|++|++.|.+...|..|+++|+..
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCc
Confidence            9999999999999999999988754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.7e-21  Score=132.89  Aligned_cols=95  Identities=19%  Similarity=0.322  Sum_probs=81.0

Q ss_pred             HHhhhCCCCccccCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChH
Q psy11589        142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKR  221 (262)
Q Consensus       142 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~  221 (262)
                      ++++|.++++|.|++|++.|.....|..|+++|. ++|.|++|++.|.....|..|+.  |.++++|.|++|++.|.+..
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~--H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES--KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH--HCSTGGGEEGGGTEECSSHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH--cCCCCCccCccccchhCCHH
Confidence            4556777888888888888888888888888874 68899999999999999999983  88889999999999999999


Q ss_pred             HHHHHHH-hhCCCCCccCC
Q psy11589        222 QLKEHMA-VHTTDRPFVCN  239 (262)
Q Consensus       222 ~l~~H~~-~h~~~~~~~C~  239 (262)
                      .|..|++ +|.+++||.|.
T Consensus        84 ~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           84 SIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHcCCCCCCCCC
Confidence            9999996 88899988875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.83  E-value=3.9e-21  Score=131.81  Aligned_cols=85  Identities=29%  Similarity=0.670  Sum_probs=72.1

Q ss_pred             cCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHH
Q psy11589        174 HTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR  252 (262)
Q Consensus       174 h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  252 (262)
                      |.+ ++|.| .|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|+++++|+|++|++.|.+...|.
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            344 67888 78888888888888888 7888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHhhcc
Q psy11589        253 QHYKVHLK  260 (262)
Q Consensus       253 ~H~~~H~~  260 (262)
                      .|+++|++
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            88888764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=8.3e-21  Score=126.85  Aligned_cols=89  Identities=27%  Similarity=0.484  Sum_probs=74.5

Q ss_pred             CCCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHH
Q psy11589        147 TGEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKE  225 (262)
Q Consensus       147 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~  225 (262)
                      .++++|.|++|++.|.+...|..|++.|.+ ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHH-HSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHH
Confidence            456778888888888888888888887776 68888888888888888888888 7888889999999999999999999


Q ss_pred             HHHhhCCCCCc
Q psy11589        226 HMAVHTTDRPF  236 (262)
Q Consensus       226 H~~~h~~~~~~  236 (262)
                      |+++|+++++.
T Consensus        83 H~~~h~~~~~p   93 (96)
T 2dmd_A           83 HLRSHTGDSGP   93 (96)
T ss_dssp             HHTTCCSCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99999887753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.5e-21  Score=131.37  Aligned_cols=89  Identities=21%  Similarity=0.357  Sum_probs=81.3

Q ss_pred             HHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCCh
Q psy11589        170 HSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLK  248 (262)
Q Consensus       170 H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  248 (262)
                      +++.|.+ ++|.|++|++.|.+...|..|++ .|  .++|.|++|++.|.....|..|++ |++++||+|++|++.|.+.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHER-LC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-HH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHH-HC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            3455666 79999999999999999999999 67  479999999999999999999996 9999999999999999999


Q ss_pred             HHHHHHHH-hhccCC
Q psy11589        249 KHLRQHYK-VHLKME  262 (262)
Q Consensus       249 ~~L~~H~~-~H~~~~  262 (262)
                      ..|..|++ +|.+++
T Consensus        83 ~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNN   97 (107)
T ss_dssp             HHHHHHHHHTSCCCC
T ss_pred             HHHHHHHHHHcCCCC
Confidence            99999997 888764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=6e-21  Score=125.97  Aligned_cols=85  Identities=34%  Similarity=0.715  Sum_probs=67.9

Q ss_pred             CCccccC--cccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHH
Q psy11589        149 EKKYVCE--TCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKE  225 (262)
Q Consensus       149 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~  225 (262)
                      +++|.|+  .|++.|.+...|..|+++|.+ ++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHH-HcCCCCCccCCCCCchhCCHHHHHH
Confidence            4667776  477777777777777777765 67888888888888888888888 7888888999999999999999999


Q ss_pred             HHHhhCCCC
Q psy11589        226 HMAVHTTDR  234 (262)
Q Consensus       226 H~~~h~~~~  234 (262)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999888875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.81  E-value=3.1e-20  Score=124.96  Aligned_cols=83  Identities=31%  Similarity=0.652  Sum_probs=78.9

Q ss_pred             CcccCCc--chhcCCCChHHHHHHHhhcCCCCccccc--ccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHH
Q psy11589        177 TQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR  252 (262)
Q Consensus       177 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  252 (262)
                      ++|.|+.  |++.|.+...|..|++ .|.++++|.|+  .|++.|.+...|..|+++|++++||.|++|++.|.+...|.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            6799996  9999999999999999 79999999996  69999999999999999999999999999999999999999


Q ss_pred             HHHHhhcc
Q psy11589        253 QHYKVHLK  260 (262)
Q Consensus       253 ~H~~~H~~  260 (262)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.81  E-value=1.8e-20  Score=123.34  Aligned_cols=82  Identities=38%  Similarity=0.773  Sum_probs=77.7

Q ss_pred             CcccCCc--chhcCCCChHHHHHHHhhcCCCCccccc--ccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHH
Q psy11589        177 TQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR  252 (262)
Q Consensus       177 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  252 (262)
                      .+|.|+.  |++.|.+...|..|++ .|.++++|.|+  .|++.|.+...|..|+++|++++||.|+.|++.|.+.+.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            5789999  9999999999999999 79999999997  59999999999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy11589        253 QHYKVHL  259 (262)
Q Consensus       253 ~H~~~H~  259 (262)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999984

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.7e-19  Score=120.17  Aligned_cols=85  Identities=34%  Similarity=0.673  Sum_probs=47.4

Q ss_pred             CCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCC--CcccccccccccCChHHHH
Q psy11589        148 GEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIH--QKSICDVCGKEFRMKRQLK  224 (262)
Q Consensus       148 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~--~~~~C~~C~~~f~~~~~l~  224 (262)
                      ++++|.|+.|++.|.+...|..|+++|.+ ++|.|++|++.|.+...|..|++ .|.++  ++|.|++|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHH-HHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhcCCCCCceECCCccchhCCHHHHH
Confidence            34445555555555555555555555544 45555555555555555555555 44443  5666666666666666666


Q ss_pred             HHHH-hhCCC
Q psy11589        225 EHMA-VHTTD  233 (262)
Q Consensus       225 ~H~~-~h~~~  233 (262)
                      .|++ +|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            6654 45443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.3e-19  Score=116.06  Aligned_cols=81  Identities=35%  Similarity=0.677  Sum_probs=56.3

Q ss_pred             ceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhh
Q psy11589         66 SYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRI  145 (262)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  145 (262)
                      ||.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+ ..|.++++|.|+.|++.|.+...|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            4667777777777777777777777667777777777777777777773 456666667777777777777777777666


Q ss_pred             hC
Q psy11589        146 HT  147 (262)
Q Consensus       146 h~  147 (262)
                      |+
T Consensus        80 H~   81 (82)
T 2kmk_A           80 HT   81 (82)
T ss_dssp             HC
T ss_pred             hC
Confidence            64

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.5e-19  Score=122.68  Aligned_cols=86  Identities=28%  Similarity=0.586  Sum_probs=64.1

Q ss_pred             hhCCCCccccCcccccccCcchHHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy11589        145 IHTGEKKYVCETCGASFALWGSLNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQL  223 (262)
Q Consensus       145 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  223 (262)
                      .|.++++|.| .|++.|.+...|..|++.|.+ ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-TTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH-HcCCCCCeeCCCCcchhcCHHHH
Confidence            3556666777 677777777777777777665 67777777777877888888877 67777888888888888888888


Q ss_pred             HHHHHhhCC
Q psy11589        224 KEHMAVHTT  232 (262)
Q Consensus       224 ~~H~~~h~~  232 (262)
                      ..|+++|+.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            888877653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.76  E-value=4.9e-19  Score=115.32  Aligned_cols=78  Identities=29%  Similarity=0.517  Sum_probs=74.1

Q ss_pred             cccC--CcchhcCCCChHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhCCCCCccCCC---CCcccCChHH
Q psy11589        178 QFVC--SYCGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCNM---CPSTFKLKKH  250 (262)
Q Consensus       178 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~  250 (262)
                      ||.|  +.|++.|.+.+.|..|++ .|.++++|.|++  |++.|.+...|..|+++|++   |.|+.   |++.|.+.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5889  889999999999999998 899999999988  99999999999999999998   99999   9999999999


Q ss_pred             HHHHHHhhc
Q psy11589        251 LRQHYKVHL  259 (262)
Q Consensus       251 L~~H~~~H~  259 (262)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999885

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=2.9e-19  Score=107.34  Aligned_cols=58  Identities=33%  Similarity=0.756  Sum_probs=53.8

Q ss_pred             CCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        176 NTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       176 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ++||.|++|++.|...+.|..|++ +|++++||.|++||+.|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-HhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            478999999999999999999999 8999999999999999999999999999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=2.5e-20  Score=122.41  Aligned_cols=81  Identities=25%  Similarity=0.493  Sum_probs=71.0

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHH
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      +||.|++|++.|.+.+.|..|++ .|.+++||.|++|++.|.+...|..|+++|++ .+|.|+.|++.|.+...|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            57889999999999999999988 78888899999999999999999999988885 78999999999999999999987


Q ss_pred             hhc
Q psy11589        257 VHL  259 (262)
Q Consensus       257 ~H~  259 (262)
                      .++
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.75  E-value=1e-19  Score=128.36  Aligned_cols=80  Identities=15%  Similarity=0.308  Sum_probs=68.3

Q ss_pred             cccCCcchhcC------CCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHH
Q psy11589        178 QFVCSYCGNTY------KNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHL  251 (262)
Q Consensus       178 ~~~C~~C~~~f------~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  251 (262)
                      ++.|++|.+.|      .....|..|+  .|++++||.|++||+.|.....|..|+++|  ++||.|++||+.|.+.+.|
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            44455554444      4566777776  488899999999999999999999999999  8999999999999999999


Q ss_pred             HHHHHhhccC
Q psy11589        252 RQHYKVHLKM  261 (262)
Q Consensus       252 ~~H~~~H~~~  261 (262)
                      ..|+++|+|+
T Consensus       117 ~~H~~~h~~~  126 (129)
T 2wbt_A          117 LDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHHCCc
Confidence            9999999986

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.73  E-value=1.7e-19  Score=118.39  Aligned_cols=80  Identities=23%  Similarity=0.453  Sum_probs=45.0

Q ss_pred             CcccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhh
Q psy11589        122 REHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNS  201 (262)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~  201 (262)
                      ++|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|++.+++.+|.|+.|++.|.+...|..|++..
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHH
Confidence            45555555555555555555555555555555555555555555555555555555555555555555555555555533

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=1.1e-18  Score=116.86  Aligned_cols=74  Identities=22%  Similarity=0.306  Sum_probs=50.2

Q ss_pred             CCCChHHHHHHHhhcCCCCcccccccccccC-ChHHHHHHHHhhCC-CCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        188 YKNPKALTSHIRNSHTIHQKSICDVCGKEFR-MKRQLKEHMAVHTT-DRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       188 f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +.....+..|++ .|.++++|.|++|++.|. ....|..|+++|++ ++||.|++|++.|.+...|..|+++|++++
T Consensus         6 ~~~~~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            6 SGPGGPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            444555666666 666677777777777777 67777777777666 667777777777777777777777766653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=4.7e-18  Score=114.21  Aligned_cols=83  Identities=27%  Similarity=0.522  Sum_probs=66.1

Q ss_pred             CCccccCc--ccccccCcchHHHHHhhcCC-CcccCC--cchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy11589        149 EKKYVCET--CGASFALWGSLNVHSYSHTN-TQFVCS--YCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQL  223 (262)
Q Consensus       149 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  223 (262)
                      .++|.|+.  |++.|.....|..|++.|.+ ++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+...|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCcCccCCHHHH
Confidence            44577775  77777777777777777765 677885  58888888888888887 78888889999999999998899


Q ss_pred             HHHHHhhCC
Q psy11589        224 KEHMAVHTT  232 (262)
Q Consensus       224 ~~H~~~h~~  232 (262)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999888864

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=4e-18  Score=109.41  Aligned_cols=70  Identities=30%  Similarity=0.728  Sum_probs=65.0

Q ss_pred             CcccCCc--chhcCCCChHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhCCCCCccCCCCCcccC
Q psy11589        177 TQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFK  246 (262)
Q Consensus       177 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  246 (262)
                      ++|.|+.  |++.|.+...|..|++..|.++++|.|++  |++.|.+...|..|+++|++++||.|++|++.|.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            6788886  99999999999999985699999999999  9999999999999999999999999999999984

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.2e-17  Score=110.94  Aligned_cols=75  Identities=16%  Similarity=0.242  Sum_probs=65.5

Q ss_pred             hhcCCCChHHHHHHHhhcCCCCccccccccccc-CChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHH-HHhhccC
Q psy11589        185 GNTYKNPKALTSHIRNSHTIHQKSICDVCGKEF-RMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQH-YKVHLKM  261 (262)
Q Consensus       185 ~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~  261 (262)
                      ...|.....|..|++ .|.++++|.|++|++.| .+...|..|+++| +++||.|++||+.|.+...|..| +++|+++
T Consensus        13 ~~~~~~~~~~~~~~~-~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYL-EIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHH-HHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHH-HhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            346677888888888 68888999999999999 8999999999999 89999999999999999999999 8888765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.2e-17  Score=105.21  Aligned_cols=61  Identities=30%  Similarity=0.539  Sum_probs=59.0

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +|+++++|.|++|++.|.....|..|+++|.+++||+|++|++.|.+...|..|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999999999999999999999999999999986

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.3e-17  Score=104.42  Aligned_cols=62  Identities=31%  Similarity=0.471  Sum_probs=57.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|+++++|.|++|++.|.+...|..|+++|++++||+|++|++.|.+...|..|+++|++++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            47888999999999999999999999999999999999999999999999999999998874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=6.4e-18  Score=110.25  Aligned_cols=79  Identities=19%  Similarity=0.398  Sum_probs=62.7

Q ss_pred             HHHHHhhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCC---CcccccccccccCChHHHHHHHHhhCCCCCccCCCCC
Q psy11589        167 LNVHSYSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIH---QKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCP  242 (262)
Q Consensus       167 l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  242 (262)
                      |..|+++|.+ ++|.|++|++.|.....|..|++..|...   ++|.|++|++.|.+...|..|+++|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            4456667665 67777778888888888888877444443   7899999999999999999999999999999999998


Q ss_pred             ccc
Q psy11589        243 STF  245 (262)
Q Consensus       243 ~~f  245 (262)
                      .+|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.71  E-value=1.9e-17  Score=104.80  Aligned_cols=62  Identities=31%  Similarity=0.653  Sum_probs=56.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .+.++++|.|++|++.|.+...|..|+++|++++||+|++|++.|.+...|..|+++|++++
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            56788899999999999999999999999999999999999999999999999999998875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.70  E-value=1.2e-17  Score=107.71  Aligned_cols=62  Identities=27%  Similarity=0.555  Sum_probs=56.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHH-HhhccCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHY-KVHLKME  262 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~  262 (262)
                      .+...++|.|++||+.|.++..|..|+++|++++||.|++|++.|.+...|.+|+ +.|.+|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            5677888999999999999999999999999999999999999999999999997 5687763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=3.3e-17  Score=107.56  Aligned_cols=81  Identities=32%  Similarity=0.583  Sum_probs=61.0

Q ss_pred             cceecCC--CcccccchhHHHhhhhhcCCCCeeecC--cchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHH
Q psy11589         65 VSYKCPD--CSVIVVSYSGFKSHLDIHNVEKEYCCH--ICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMK  140 (262)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~  140 (262)
                      .+|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|+ ..|.++++|.|+.|++.|.+...|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCHHHHH
Confidence            4577877  888888888888888877777777776  4777777777777774 4677777777777777777777777


Q ss_pred             hHHhhh
Q psy11589        141 VHMRIH  146 (262)
Q Consensus       141 ~H~~~h  146 (262)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            777765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.69  E-value=2.2e-17  Score=98.89  Aligned_cols=57  Identities=33%  Similarity=0.613  Sum_probs=50.7

Q ss_pred             CCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        204 IHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       204 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      +++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999999999999999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.68  E-value=4e-17  Score=97.76  Aligned_cols=56  Identities=36%  Similarity=0.699  Sum_probs=51.8

Q ss_pred             cccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ||.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999999998875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=2.5e-17  Score=101.80  Aligned_cols=61  Identities=20%  Similarity=0.454  Sum_probs=57.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHh-h-CCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAV-H-TTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      .|++++||.|++|++.|.+...|..|+++ | .+++||.|+.|++.|.+.+.|..|+++|+|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            68999999999999999999999999998 7 5899999999999999999999999999874

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=6.7e-17  Score=103.08  Aligned_cols=61  Identities=33%  Similarity=0.645  Sum_probs=41.5

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      ++|.|++|++.|.....|..|++ .|.++++|.|++|++.|.....|..|+++|++++||+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56666666666666666666666 56666666666666666666666666666666666665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.6e-17  Score=105.02  Aligned_cols=67  Identities=24%  Similarity=0.411  Sum_probs=56.8

Q ss_pred             HHHHHHhhcCCCCcccccccccccCChHHHHHHHH-hhCCC-CCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        194 LTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMA-VHTTD-RPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       194 l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |.+|++ +|++++||.|++|++.|.+...|..|++ .|.++ +||+|++|++.|.+...|..|+++|++.
T Consensus         3 ~~~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCC-CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCcccc-ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            445777 7889999999999999999999999987 67764 8899999999999999999999887653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=6.6e-17  Score=105.38  Aligned_cols=80  Identities=31%  Similarity=0.446  Sum_probs=52.1

Q ss_pred             HHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCC---CcccCccccccccCchhHHhHHhhhCCCCccccCccc
Q psy11589         82 FKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENV---REHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCG  158 (262)
Q Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  158 (262)
                      |..|+++|.++++|.|.+|++.|.....|..|++..|...   ++|.|++|++.|.....|..|+++|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            4556666666666666666666666666666654444432   5677777777777777777777777777777777666


Q ss_pred             ccc
Q psy11589        159 ASF  161 (262)
Q Consensus       159 ~~f  161 (262)
                      ..+
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=8.4e-17  Score=102.62  Aligned_cols=62  Identities=31%  Similarity=0.648  Sum_probs=55.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .+.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            46678899999999999999999999999999999999999999999999999999998874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=4.2e-17  Score=108.93  Aligned_cols=67  Identities=21%  Similarity=0.434  Sum_probs=55.6

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhc---CCCCcccccccccccCChHHHHHH-HHhhCCCCCccCCCCCc
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSH---TIHQKSICDVCGKEFRMKRQLKEH-MAVHTTDRPFVCNMCPS  243 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  243 (262)
                      +||.|+.|++.|...+.|..|++..|   .+++||.|++||+.|..++.|..| +++|++++||.|.++..
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            67888888888888888888886457   567888899999999888888888 78888888888887543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=5.1e-17  Score=102.52  Aligned_cols=68  Identities=24%  Similarity=0.585  Sum_probs=60.4

Q ss_pred             hHHHHHHHhhcCCCCccccc--ccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        192 KALTSHIRNSHTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       192 ~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      ..|..|++.+|.++++|.|+  .|++.|.+...|..|+++|.+++||.|++||+.|.+.+.|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45666777789999999997  599999999999999999999999999999999999999999999985

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.64  E-value=1.7e-17  Score=116.83  Aligned_cols=111  Identities=20%  Similarity=0.306  Sum_probs=79.4

Q ss_pred             hhcCCCcccCccccccccCchhHHhHHhhh---CCCCccccCccccccc------CcchHHHHHhhcCC-CcccCCcchh
Q psy11589        117 VHENVREHQCSVCGKAFADITNMKVHMRIH---TGEKKYVCETCGASFA------LWGSLNVHSYSHTN-TQFVCSYCGN  186 (262)
Q Consensus       117 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~-~~~~C~~C~~  186 (262)
                      ++.+.++|.|...+....  ..+..+.+.+   ..++.+.|++|++.|.      ....|..|++ |++ +||.|++|++
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~-h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA-SKAISQFVCPLCLM   82 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH-HHHHCSEECTTTCC
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHH-hCCCCCeECCCCCc
Confidence            455666776655443322  2233332222   2334567777776665      5566667764 544 8999999999


Q ss_pred             cCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        187 TYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       187 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      .|.....|..|++ .|  ++||.|++|++.|.+.+.|..|+++|+++
T Consensus        83 ~f~~~~~l~~H~~-~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           83 PFSSSVSLKQHIR-YT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             EESSHHHHHHHHH-HT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ccCCHhHHHHHHH-HC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999998 67  78999999999999999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2e-16  Score=101.39  Aligned_cols=69  Identities=23%  Similarity=0.449  Sum_probs=34.0

Q ss_pred             ccceecCC--CcccccchhHHHhhhh-hcCCCCeeecCc--chhhccChhHHHHHHHHhhcCCCcccCccccccc
Q psy11589         64 KVSYKCPD--CSVIVVSYSGFKSHLD-IHNVEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAF  133 (262)
Q Consensus        64 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f  133 (262)
                      +++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+ ..|.++++|.|++|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCCCCCC
Confidence            34455543  5555555555555554 344445555554  555555555555552 234444445555554444

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.2e-16  Score=106.86  Aligned_cols=79  Identities=19%  Similarity=0.295  Sum_probs=66.7

Q ss_pred             cccCcchHHHHHhhcCC-CcccCCcchhcCC-CChHHHHHHHhhcCC-CCcccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        160 SFALWGSLNVHSYSHTN-TQFVCSYCGNTYK-NPKALTSHIRNSHTI-HQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       160 ~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~-~~~~l~~H~~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      .+.....+..|+++|.+ ++|.|++|++.|. ....|..|++ .|.+ +++|.|++|++.|.++..|..|+++|++++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME-VCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH-HHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            34555667778888876 7899999999999 9999999998 6777 88999999999999999999999999999886


Q ss_pred             cCC
Q psy11589        237 VCN  239 (262)
Q Consensus       237 ~C~  239 (262)
                      .-.
T Consensus        84 ~~~   86 (98)
T 2gqj_A           84 DAE   86 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            544

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.62  E-value=4.6e-16  Score=101.04  Aligned_cols=77  Identities=25%  Similarity=0.339  Sum_probs=52.7

Q ss_pred             ceec--CCCcccccchhHHHhhhhhcCCCCeeecCc--chhhccChhHHHHHHHHhhcCCCcccCcc---ccccccCchh
Q psy11589         66 SYKC--PDCSVIVVSYSGFKSHLDIHNVEKEYCCHI--CKKVFLRNRNLVCHIKAVHENVREHQCSV---CGKAFADITN  138 (262)
Q Consensus        66 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~---C~~~f~~~~~  138 (262)
                      ||.|  +.|++.|.+...|..|+++|.++++|.|++  |++.|.....|..|+ ..|.+   |.|+.   |++.|.+...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCC---CCCCCCCCCCCccCCHHH
Confidence            4667  667777777777777777777777777766  777777777777774 34544   66666   7777776666


Q ss_pred             HHhHHhhh
Q psy11589        139 MKVHMRIH  146 (262)
Q Consensus       139 l~~H~~~h  146 (262)
                      |..|+++|
T Consensus        77 l~~H~~~h   84 (85)
T 2j7j_A           77 YLKHVAEC   84 (85)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            66666655

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.8e-16  Score=94.47  Aligned_cols=56  Identities=30%  Similarity=0.733  Sum_probs=48.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHH-HhhccC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHY-KVHLKM  261 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~  261 (262)
                      +||.|++|++.|.+...|..|+++|++++||.|+.|++.|.+.+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47889999999999999999999999999999999999999999999997 677765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.9e-16  Score=104.19  Aligned_cols=61  Identities=21%  Similarity=0.305  Sum_probs=56.9

Q ss_pred             cCCCCcccccccccccCChHHHHHHHH-hh---CCCCCccCCCCCcccCChHHHHHH-HHhhccCC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMA-VH---TTDRPFVCNMCPSTFKLKKHLRQH-YKVHLKME  262 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~~  262 (262)
                      -++++||.|++||+.|.+++.|..|++ +|   .+++||.|++||+.|.+.+.|..| +++|+|++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgek   78 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEE   78 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCC
Confidence            468899999999999999999999998 59   678999999999999999999999 89999985

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=4.4e-16  Score=99.52  Aligned_cols=61  Identities=23%  Similarity=0.445  Sum_probs=51.5

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCC---CCCccCCCCCcccCChHHHHHHHH-hhccC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT---DRPFVCNMCPSTFKLKKHLRQHYK-VHLKM  261 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~  261 (262)
                      .|++++||.|++|++.|.+...|..|+++|++   +++|.|++|++.|.+...|..|++ .|.++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            37788899999999999999999999998885   788999999999999999999984 45443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.61  E-value=5.6e-16  Score=97.96  Aligned_cols=59  Identities=27%  Similarity=0.683  Sum_probs=56.1

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      ++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++||
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHH-HHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHH-HcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            78999999999999999999998 799999999999999999999999999999999986

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=6.1e-16  Score=102.69  Aligned_cols=77  Identities=21%  Similarity=0.282  Sum_probs=59.1

Q ss_pred             ccccCcchHHHHHhhcCC-CcccCCcchhcC-CCChHHHHHHHhhcCCCCcccccccccccCChHHHHHH-HHhhCCCCC
Q psy11589        159 ASFALWGSLNVHSYSHTN-TQFVCSYCGNTY-KNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEH-MAVHTTDRP  235 (262)
Q Consensus       159 ~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  235 (262)
                      ..|.....|..|.+.+.+ ++|.|+.|++.| .+...|..|++ .| ++++|.|++|++.|..+..|..| +++|+++..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            345566667777776655 678888888888 78888888888 67 88888888888888888888888 778876554


Q ss_pred             cc
Q psy11589        236 FV  237 (262)
Q Consensus       236 ~~  237 (262)
                      |.
T Consensus        92 ~~   93 (96)
T 2ctd_A           92 GP   93 (96)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.6e-15  Score=93.72  Aligned_cols=59  Identities=24%  Similarity=0.350  Sum_probs=54.5

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      ++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.....|..|+++|++++|.
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHG-GGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHH-HcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            78999999999999999999998 799999999999999999999999999999998874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=7.1e-15  Score=94.64  Aligned_cols=66  Identities=20%  Similarity=0.366  Sum_probs=57.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVR  122 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  122 (262)
                      .+..+...++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|++..|+++.
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            344556677899999999999999999999999999999999999999999999999888888764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.55  E-value=3.9e-15  Score=88.92  Aligned_cols=56  Identities=32%  Similarity=0.681  Sum_probs=52.9

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ||.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999999999999 7999999999999999999999999999998876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.1e-15  Score=94.75  Aligned_cols=62  Identities=29%  Similarity=0.546  Sum_probs=53.3

Q ss_pred             hhcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        172 YSHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       172 ~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ++|.+ ++|.|++|++.|.....|..|++ .|.+++||.|++|++.|.+...|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHH-hcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            44555 78889999999999999999988 7888899999999999999999999999988764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=8.6e-17  Score=101.40  Aligned_cols=71  Identities=18%  Similarity=0.276  Sum_probs=42.7

Q ss_pred             chhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCccccccc
Q psy11589        136 ITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVC  213 (262)
Q Consensus       136 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  213 (262)
                      ...|..|+++|.++++|.|+.|++.|.....|..      .++|.|+.|++.|...+.|..|++ .|.+++||.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEG-NESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSS-CCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHH-hhcCCCCCCCCCC
Confidence            3456667777777777777777777766665554      345555555555555555555555 4555555555554

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=5.7e-15  Score=91.03  Aligned_cols=58  Identities=21%  Similarity=0.345  Sum_probs=52.5

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC-CCCcccCChHHHHHHHHhhccC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN-MCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      .-+++||.|+.|++.|. .+.|..|+++ ++++||.|+ .||+.|...+.|..|+++|.++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            45678999999999999 9999999999 999999999 9999999999999999998765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=1.4e-14  Score=96.13  Aligned_cols=63  Identities=24%  Similarity=0.349  Sum_probs=54.0

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCCCCc--------ccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTIHQK--------SICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .+.|+.|++.|.+...|..|++..|.++++        |.|++|++.|.+...|..|+++|++++||+|+.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            467888888888888888888833888777        899999999999999999999999999999863

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.4e-14  Score=90.35  Aligned_cols=69  Identities=19%  Similarity=0.357  Sum_probs=44.3

Q ss_pred             ccccccCCCccceecCCCcccccchhHHHhhhh-hcCCC-CeeecCcchhhccChhHHHHHHHHhhcCCCc
Q psy11589         55 AIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLD-IHNVE-KEYCCHICKKVFLRNRNLVCHIKAVHENVRE  123 (262)
Q Consensus        55 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  123 (262)
                      ..|++.|.++++|.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++..|..+.|
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            456666666667777777777777777777765 45443 5666666666666666666666555555443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.1e-14  Score=87.00  Aligned_cols=55  Identities=29%  Similarity=0.583  Sum_probs=48.7

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCC
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      ++|.|++|++.|.+...|..|++ .|.+++||.|++|++.|.+...|..|+++|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHH-HcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            68999999999999999999998 79999999999999999999999999998864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=3e-16  Score=98.90  Aligned_cols=69  Identities=17%  Similarity=0.274  Sum_probs=45.4

Q ss_pred             HHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcc
Q psy11589         81 GFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETC  157 (262)
Q Consensus        81 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  157 (262)
                      .|..|+++|.++++|.|++|++.|.....|..        +++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            44555555666666666666666665555443        4667777777777777777777777777777777765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.8e-14  Score=86.13  Aligned_cols=56  Identities=29%  Similarity=0.648  Sum_probs=50.4

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHH-HhhCCC
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHM-AVHTTD  233 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  233 (262)
                      +||.|+.|++.|.+...|..|++ .|.+++||.|++|++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47899999999999999999998 799999999999999999999999997 678765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.4e-14  Score=86.58  Aligned_cols=56  Identities=32%  Similarity=0.635  Sum_probs=21.5

Q ss_pred             CCCeeecCcchhhccChhHHHHHHHHhh-cCCCcccCccccccccCchhHHhHHhhh
Q psy11589         91 VEKEYCCHICKKVFLRNRNLVCHIKAVH-ENVREHQCSVCGKAFADITNMKVHMRIH  146 (262)
Q Consensus        91 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h  146 (262)
                      ++++|.|+.|++.|.....|..|+...| .++++|.|+.|++.|.+...|..|++.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII   63 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHH
Confidence            3333334444444443334444422223 2333344444444444444444443333

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.45  E-value=6e-14  Score=87.98  Aligned_cols=58  Identities=31%  Similarity=0.686  Sum_probs=53.0

Q ss_pred             hcCCCCcccccc--cccccCChHHHHHHHHhhCCCCCccCCC--CCcccCChHHHHHHHHhh
Q psy11589        201 SHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCNM--CPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       201 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H  258 (262)
                      .....++|.|+.  |++.|.....|..|+++|++++||+|++  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            356678999988  9999999999999999999999999975  999999999999999876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=88.19  Aligned_cols=66  Identities=15%  Similarity=0.280  Sum_probs=51.8

Q ss_pred             CCCccceecCCCcccccchhHHHhhhhhcCC---CCeeecCcchhhccChhHHHHHHHHhhcCCCcccC
Q psy11589         61 INKKVSYKCPDCSVIVVSYSGFKSHLDIHNV---EKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQC  126 (262)
Q Consensus        61 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C  126 (262)
                      |+++++|.|.+|++.|.....|..|++.|.+   +++|.|++|++.|.....|..|++..|.++.+..-
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            5677788888888888888888888888875   67888888888888888888887677777665443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.43  E-value=5.1e-14  Score=80.07  Aligned_cols=45  Identities=31%  Similarity=0.380  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCC-ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.43  E-value=1.2e-13  Score=81.38  Aligned_cols=48  Identities=33%  Similarity=0.613  Sum_probs=44.5

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHH-hhCCCCCccCCCCCcccCCh
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMA-VHTTDRPFVCNMCPSTFKLK  248 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~  248 (262)
                      .|++++||.|++|++.|.....|..|++ +|.+++||+|++|++.|.++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            4788999999999999999999999997 99999999999999999863

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=2.9e-13  Score=89.65  Aligned_cols=58  Identities=22%  Similarity=0.336  Sum_probs=54.1

Q ss_pred             CCcccccccccccCChHHHHHHHHh-hCCCCC--------ccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAV-HTTDRP--------FVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ...|.|++|++.|.+...|..|+++ |.++++        |.|++|++.|.+...|..|+++|++++
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   89 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK   89 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3457899999999999999999998 999888        999999999999999999999999875

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.5e-14  Score=79.90  Aligned_cols=45  Identities=29%  Similarity=0.352  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSS-CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCC-CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=6.7e-14  Score=79.54  Aligned_cols=45  Identities=31%  Similarity=0.334  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCC-CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.9e-14  Score=79.80  Aligned_cols=45  Identities=27%  Similarity=0.299  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcc-cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.3e-14  Score=79.97  Aligned_cols=44  Identities=27%  Similarity=0.382  Sum_probs=41.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcC-CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.4e-14  Score=79.95  Aligned_cols=45  Identities=29%  Similarity=0.406  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccC-CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=7.2e-14  Score=79.43  Aligned_cols=45  Identities=33%  Similarity=0.457  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|++++||.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCC-CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3566 79999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.9e-14  Score=79.79  Aligned_cols=44  Identities=27%  Similarity=0.386  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCc-CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=6.8e-14  Score=78.73  Aligned_cols=44  Identities=20%  Similarity=0.252  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++||+.|.+.+.|..|+++|++++||+|++|
T Consensus         1 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSS-GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCC-CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCC-CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345 79999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.41  E-value=5.5e-14  Score=79.93  Aligned_cols=45  Identities=22%  Similarity=0.222  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGS-SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcC-ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3566 79999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.9e-14  Score=79.80  Aligned_cols=45  Identities=31%  Similarity=0.341  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGS-SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCC-CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3566 79999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=7e-14  Score=79.47  Aligned_cols=45  Identities=31%  Similarity=0.378  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCcc-ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=7.3e-14  Score=79.39  Aligned_cols=45  Identities=29%  Similarity=0.400  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|++++||.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCc-CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3566 79999999999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=5.7e-14  Score=79.86  Aligned_cols=45  Identities=27%  Similarity=0.471  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGS-SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcC-CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.41  E-value=8e-14  Score=79.22  Aligned_cols=44  Identities=27%  Similarity=0.324  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCC-CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556 79999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.5e-14  Score=79.91  Aligned_cols=45  Identities=29%  Similarity=0.415  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             Cccc-ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=9.6e-14  Score=78.88  Aligned_cols=44  Identities=27%  Similarity=0.287  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCC-CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            556 79999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=7.9e-14  Score=79.25  Aligned_cols=44  Identities=30%  Similarity=0.398  Sum_probs=41.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccc-CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.1e-13  Score=78.70  Aligned_cols=44  Identities=27%  Similarity=0.317  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGS-SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSS-CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCc-CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            555 79999999999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=8.4e-14  Score=79.15  Aligned_cols=45  Identities=31%  Similarity=0.456  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|+++++|.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSC-TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             Cccc-CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4666 79999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.40  E-value=5.4e-14  Score=79.94  Aligned_cols=45  Identities=31%  Similarity=0.268  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccc-CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8e-14  Score=79.24  Aligned_cols=45  Identities=33%  Similarity=0.444  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSS-CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCC-CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.2e-14  Score=88.49  Aligned_cols=65  Identities=28%  Similarity=0.577  Sum_probs=37.8

Q ss_pred             HHHHHHHhhcCCCcccCc--cccccccCchhHHhHHhhhCCCCccccCcccccccCcchHHHHHhhc
Q psy11589        110 LVCHIKAVHENVREHQCS--VCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSH  174 (262)
Q Consensus       110 l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  174 (262)
                      |..|+..+|.++++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+++|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            333444455556666664  36666666666666666666666666666666666666666666554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=7.4e-14  Score=79.37  Aligned_cols=45  Identities=31%  Similarity=0.384  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcc-ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3566 79999999999999999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.5e-14  Score=79.92  Aligned_cols=45  Identities=24%  Similarity=0.294  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++||+.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCC-CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCC-CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4666 79999999999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.40  E-value=7.1e-14  Score=79.45  Aligned_cols=45  Identities=31%  Similarity=0.434  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCS-SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcc-CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8.1e-14  Score=79.20  Aligned_cols=45  Identities=29%  Similarity=0.467  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCC-CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=7.5e-14  Score=79.34  Aligned_cols=45  Identities=27%  Similarity=0.389  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|+++++|.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcc-cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3566 79999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=9.8e-14  Score=78.86  Aligned_cols=44  Identities=20%  Similarity=0.326  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 h~~-~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGS-SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCS-CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCC-CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            555 79999999999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=6.9e-14  Score=79.49  Aligned_cols=44  Identities=30%  Similarity=0.395  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCc-CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556 79999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=6.4e-14  Score=79.63  Aligned_cols=45  Identities=33%  Similarity=0.462  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCC-CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8.6e-14  Score=79.09  Aligned_cols=44  Identities=30%  Similarity=0.354  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccc-ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=78.62  Aligned_cols=44  Identities=27%  Similarity=0.292  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCC-CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCc-CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455 79999999999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8.2e-14  Score=79.17  Aligned_cols=45  Identities=31%  Similarity=0.415  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|+++++|.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTT-CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             Cccc-CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4666 79999999999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=7.2e-14  Score=79.41  Aligned_cols=45  Identities=27%  Similarity=0.310  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|+.|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGS-SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             Cccc-cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=9.5e-14  Score=78.92  Aligned_cols=44  Identities=32%  Similarity=0.409  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|+++++|.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGS-SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCC-CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            555 79999999999999999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=8.9e-14  Score=79.03  Aligned_cols=44  Identities=27%  Similarity=0.341  Sum_probs=41.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|+++++|.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCC-ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            556 79999999999999999999999999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.8e-14  Score=79.26  Aligned_cols=45  Identities=31%  Similarity=0.303  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|++ .|++++||.|++||+.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGS-SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcc-cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3566 79999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.3e-13  Score=78.35  Aligned_cols=44  Identities=20%  Similarity=0.209  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGS-SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSC-CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccc-ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            555 79999999999999999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.4e-13  Score=78.24  Aligned_cols=44  Identities=23%  Similarity=0.287  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGS-SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCC-CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            455 79999999999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.39  E-value=1.1e-13  Score=78.57  Aligned_cols=44  Identities=30%  Similarity=0.368  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCC-SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCC-CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.8e-14  Score=79.82  Aligned_cols=44  Identities=30%  Similarity=0.359  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCc-CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=78.69  Aligned_cols=44  Identities=32%  Similarity=0.381  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCc-CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            566 79999999999999999999999999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.38  E-value=1.3e-13  Score=78.31  Aligned_cols=44  Identities=25%  Similarity=0.245  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|+++++|.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 h~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGS-SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCC-SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCC-CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455 79999999999999999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.7e-14  Score=79.85  Aligned_cols=45  Identities=29%  Similarity=0.389  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCC-CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3566 78999999999999999999999999999999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.6e-13  Score=77.90  Aligned_cols=44  Identities=23%  Similarity=0.245  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|+++++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGS-SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCC-CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCC-CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            455 79999999999999999999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=78.16  Aligned_cols=45  Identities=29%  Similarity=0.355  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      +|++ .|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGS-SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCC-CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3666 79999999999999999999999999999999999999875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=5.2e-13  Score=75.38  Aligned_cols=42  Identities=19%  Similarity=0.285  Sum_probs=40.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCP  242 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  242 (262)
                      .|++++||.|++|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            689999999999999999999999999999999999999997

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.7e-13  Score=77.36  Aligned_cols=44  Identities=27%  Similarity=0.279  Sum_probs=41.3

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHH-hhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMA-VHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  241 (262)
                      |++ .|++++||.|++|++.|...+.|..|++ +|++++||+|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCC-CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccc-ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            556 7999999999999999999999999999 9999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.8e-13  Score=76.38  Aligned_cols=44  Identities=27%  Similarity=0.416  Sum_probs=40.8

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      |++ .|+++++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGS-SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCC-CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            556 79999999999999999999999999999999999999875

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=5.9e-13  Score=76.29  Aligned_cols=43  Identities=26%  Similarity=0.576  Sum_probs=40.3

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCc
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPS  243 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  243 (262)
                      .|.++++|.|++|++.|.+...|..|+++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4778899999999999999999999999999999999999986

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.6e-13  Score=82.82  Aligned_cols=56  Identities=18%  Similarity=0.347  Sum_probs=48.6

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCccccc-ccccccCChHHHHHHHHhhCCCCC
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICD-VCGKEFRMKRQLKEHMAVHTTDRP  235 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  235 (262)
                      +||.|+.|++.|. .+.|..|++ . .+++||.|+ .||+.|..++.|..|+++|.+.+|
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            6888999999999 889999988 5 888999999 899999999999999998877665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.32  E-value=4.9e-14  Score=85.55  Aligned_cols=55  Identities=16%  Similarity=0.329  Sum_probs=47.9

Q ss_pred             HHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHH
Q psy11589        194 LTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLR  252 (262)
Q Consensus       194 l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  252 (262)
                      |..|++ .|++++||.|++||+.|.....|.   ++|++++||.|++||+.|....++.
T Consensus         2 L~~h~~-~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDER-DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSS-SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHH-HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            345777 799999999999999999988886   7899999999999999998877653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.31  E-value=7.3e-13  Score=73.58  Aligned_cols=42  Identities=24%  Similarity=0.326  Sum_probs=38.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|+++++|.|++|++.|.+.+.|..|+++|++++||.|+
T Consensus         1 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSS-GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCS-SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCC-CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            345 789999999999999999999999999999999999985

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=9.3e-13  Score=73.13  Aligned_cols=42  Identities=17%  Similarity=0.253  Sum_probs=37.7

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|+
T Consensus         1 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSS-GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCS-SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCc-CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            345 689999999999999999999999999999999999985

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=8.5e-13  Score=74.88  Aligned_cols=43  Identities=30%  Similarity=0.335  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGS-SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCC-CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Ccc-ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566 7999999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.30  E-value=3.4e-13  Score=79.39  Aligned_cols=50  Identities=20%  Similarity=0.375  Sum_probs=30.4

Q ss_pred             hcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        186 NTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       186 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      +.|.....|..|++ .|+++++|.|++||+.|...+.|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRS-RSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHH-HHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHH-hcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            44555556666665 566666666666666666666666666666666655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.8e-13  Score=75.03  Aligned_cols=44  Identities=32%  Similarity=0.415  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      +|++ .|+++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             Cccc-ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3566 7999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.6e-13  Score=75.08  Aligned_cols=43  Identities=28%  Similarity=0.399  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCc-CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            556 7899999999999999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=74.36  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=39.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|+++++|.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999999999999999999988

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.4e-13  Score=74.67  Aligned_cols=44  Identities=34%  Similarity=0.386  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      +|++ .|+++++|.|++|++.|.+...|..|+++|++++||+|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCC-CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccc-CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3666 7999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.8e-13  Score=75.29  Aligned_cols=43  Identities=30%  Similarity=0.381  Sum_probs=39.5

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGS-SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             ccc-CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566 7999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8e-13  Score=74.99  Aligned_cols=44  Identities=32%  Similarity=0.406  Sum_probs=40.1

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|++ .|++++||.|++|++.|.+...|..|+++|++++||+|++
T Consensus         2 ~H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCC-CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3666 7999999999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.30  E-value=9.2e-13  Score=74.74  Aligned_cols=43  Identities=30%  Similarity=0.420  Sum_probs=39.5

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGS-SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCC-CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566 7999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.5e-13  Score=75.09  Aligned_cols=44  Identities=32%  Similarity=0.442  Sum_probs=39.9

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|++ .|++++||.|++|++.|.+...|..|+++|++++||+|++
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGS-SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccC-CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            3566 7999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.3e-13  Score=74.91  Aligned_cols=43  Identities=28%  Similarity=0.409  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCc-CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            556 7899999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.9e-13  Score=74.80  Aligned_cols=44  Identities=30%  Similarity=0.430  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      +|++ .|++++||.|++|++.|.+...|..|+++|++++||+|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCS-CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             Cccc-CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3666 7999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=73.50  Aligned_cols=41  Identities=34%  Similarity=0.472  Sum_probs=39.3

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|+++++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999999999999999999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=74.18  Aligned_cols=43  Identities=35%  Similarity=0.419  Sum_probs=39.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|+++++|.|++|++.|.+...|..|+++|++++||+|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCC-CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCC-CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566 7899999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=74.31  Aligned_cols=43  Identities=23%  Similarity=0.301  Sum_probs=39.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|+++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGS-SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCC-CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555 7999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=74.55  Aligned_cols=43  Identities=35%  Similarity=0.475  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             Ccc-ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556 7899999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.7e-13  Score=74.63  Aligned_cols=44  Identities=32%  Similarity=0.438  Sum_probs=40.0

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      +|++ .|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCC-CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             Cccc-cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3666 7999999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.1e-13  Score=74.74  Aligned_cols=43  Identities=28%  Similarity=0.304  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCC-CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556 7899999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=73.99  Aligned_cols=43  Identities=28%  Similarity=0.369  Sum_probs=39.5

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|+++++|.|++|++.|.+...|..|+++|++++||+|+.
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCc-ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            566 7999999999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=73.66  Aligned_cols=43  Identities=26%  Similarity=0.270  Sum_probs=38.9

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGS-SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCC-SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCC-CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555 7899999999999999999999999999999999999973

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=73.54  Aligned_cols=43  Identities=33%  Similarity=0.386  Sum_probs=38.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      .|++ .|+++++|.|++|++.|.+...|..|+++|++++||+|+
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCC-CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCc-CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3566 789999999999999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=74.34  Aligned_cols=44  Identities=32%  Similarity=0.467  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|++ .|+++++|.|++|++.|.....|..|+++|++++||+|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             Cccc-ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3566 7899999999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=74.32  Aligned_cols=43  Identities=33%  Similarity=0.448  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSS-SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCc-CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566 7999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.5e-13  Score=74.67  Aligned_cols=44  Identities=34%  Similarity=0.480  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|++ .|++++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGS-SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSC-CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCC-CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            3566 7999999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.27  E-value=8.1e-13  Score=77.74  Aligned_cols=49  Identities=14%  Similarity=0.360  Sum_probs=45.3

Q ss_pred             ccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        214 GKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       214 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ++.|.....|..|+++|++++||.|++||+.|.+.+.|..|+++|+|++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            4678888899999999999999999999999999999999999999875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=74.08  Aligned_cols=43  Identities=35%  Similarity=0.525  Sum_probs=39.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSS-SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCC-CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            455 7899999999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.2e-12  Score=73.46  Aligned_cols=43  Identities=28%  Similarity=0.294  Sum_probs=38.5

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      .|++ .|+++++|.|++|++.|.+...|..|+++|++++||+|+
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSS-CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCcc-CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3566 789999999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=73.31  Aligned_cols=42  Identities=29%  Similarity=0.276  Sum_probs=38.5

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|++++||.|++|++.|...+.|..|+++|++++||+|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGS-SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCC-SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             Ccc-ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566 799999999999999999999999999999999999985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=74.34  Aligned_cols=43  Identities=30%  Similarity=0.424  Sum_probs=39.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|+++++|.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             Ccc-CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566 7899999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=74.35  Aligned_cols=43  Identities=33%  Similarity=0.327  Sum_probs=39.3

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      +|++ .|++++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCC-CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             Cccc-ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3666 799999999999999999999999999999999999996

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.2e-12  Score=73.46  Aligned_cols=42  Identities=17%  Similarity=0.205  Sum_probs=37.7

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGS-SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSC-CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Ccc-ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            566 788999999999999999999999999999999999885

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.5e-12  Score=73.11  Aligned_cols=43  Identities=19%  Similarity=0.344  Sum_probs=38.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      .|++ .|++++||.|++|++.|...+.|..|+++|++++||+|+
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGS-SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCS-CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             Cccc-ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3566 789999999999999999999999999999999999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.9e-12  Score=71.82  Aligned_cols=41  Identities=29%  Similarity=0.515  Sum_probs=36.5

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         2 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSG-SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCS-CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCc-ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            445 68899999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.9e-12  Score=73.41  Aligned_cols=44  Identities=32%  Similarity=0.458  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|++ .|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         2 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCC-SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             Cccc-CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3566 7899999999999999999999999999999999999973

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.24  E-value=2.5e-12  Score=71.32  Aligned_cols=41  Identities=22%  Similarity=0.327  Sum_probs=36.5

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         2 H~~-~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSG-SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCS-CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCc-cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344 68899999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.1e-12  Score=72.83  Aligned_cols=41  Identities=34%  Similarity=0.445  Sum_probs=36.3

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      |++ .|++++||.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCC-CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             Ccc-ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            555 78889999999999999999999999999999999887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=73.83  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=39.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGS-SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCS-CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCc-CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566 7899999999999999999999999999999999999973

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.5e-12  Score=71.53  Aligned_cols=42  Identities=31%  Similarity=0.402  Sum_probs=37.8

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|+++++|.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 h~~-~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGS-SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSC-SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCC-CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            445 788999999999999999999999999999999999985

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.1e-12  Score=73.19  Aligned_cols=43  Identities=21%  Similarity=0.250  Sum_probs=38.4

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCC-CCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT-DRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++ ++||+|++
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGS-SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             Ccc-ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555 78899999999999999999999999999999 99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=72.71  Aligned_cols=43  Identities=30%  Similarity=0.411  Sum_probs=38.1

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 h~~-~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGS-SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCC-CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445 6889999999999999999999999999999999999963

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=9.3e-12  Score=69.39  Aligned_cols=40  Identities=18%  Similarity=0.262  Sum_probs=37.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|+++++|.|++|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            6889999999999999999999999999999999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-12  Score=71.90  Aligned_cols=41  Identities=24%  Similarity=0.414  Sum_probs=35.9

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||+|
T Consensus         2 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSG-SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCC-CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCc-ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            445 68889999999999999999999999999999999887

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.3e-13  Score=84.46  Aligned_cols=66  Identities=23%  Similarity=0.338  Sum_probs=57.9

Q ss_pred             hHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        192 KALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       192 ~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ..|..|++ .|.+++|+.|+.|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++|.++
T Consensus         3 ~~L~~H~~-~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEE-TECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCC-CCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCc-ccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            45677876 689999999999999994 89999999 899999999999999877 58999999999876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.7e-12  Score=73.63  Aligned_cols=42  Identities=24%  Similarity=0.286  Sum_probs=37.8

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGS-SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCC-CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccc-ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566 788999999999999999999999999999999999986

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=69.73  Aligned_cols=45  Identities=16%  Similarity=0.166  Sum_probs=32.7

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            355666777777777777777777777777777777777777765

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.8e-12  Score=72.73  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=37.8

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|++++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGS-SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCC-CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCc-CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556 789999999999999999999999999999999999984

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.4e-11  Score=69.67  Aligned_cols=40  Identities=25%  Similarity=0.365  Sum_probs=37.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|+++++|.|++|++.|.+...|..|+++|++++||+|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            6889999999999999999999999999999999999974

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.20  E-value=1.5e-11  Score=69.61  Aligned_cols=45  Identities=16%  Similarity=0.065  Sum_probs=33.6

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666777777777777777777777777777777777777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=69.57  Aligned_cols=45  Identities=22%  Similarity=0.240  Sum_probs=32.6

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            355666677777777777777777777777777777777777765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.7e-11  Score=69.38  Aligned_cols=45  Identities=24%  Similarity=0.286  Sum_probs=33.9

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            355666777777787788877777777777777777777777766

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.5e-12  Score=71.81  Aligned_cols=41  Identities=24%  Similarity=0.291  Sum_probs=39.1

Q ss_pred             hcCCCCccccc--ccccccCChHHHHHHHHhhCCCCCccCCCC
Q psy11589        201 SHTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDRPFVCNMC  241 (262)
Q Consensus       201 ~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  241 (262)
                      .|+++++|.|+  .|++.|.....|..|+++|++++||+|++|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68999999998  899999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.8e-11  Score=69.26  Aligned_cols=45  Identities=18%  Similarity=0.190  Sum_probs=33.6

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            355666777777777777777777777777777777777777765

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.1e-11  Score=69.82  Aligned_cols=40  Identities=33%  Similarity=0.448  Sum_probs=37.7

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            6899999999999999999999999999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.2e-12  Score=70.23  Aligned_cols=42  Identities=24%  Similarity=0.221  Sum_probs=36.7

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCN  239 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  239 (262)
                      |++ .|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGS-SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCC-CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCc-ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            555 788899999999999999999999999999999998874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.19  E-value=1.8e-11  Score=69.23  Aligned_cols=44  Identities=23%  Similarity=0.293  Sum_probs=31.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566667777777777777777777777777777777777665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.19  E-value=1.5e-11  Score=69.54  Aligned_cols=44  Identities=16%  Similarity=0.217  Sum_probs=29.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666667777777777777777777777766666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.7e-11  Score=69.31  Aligned_cols=44  Identities=20%  Similarity=0.234  Sum_probs=30.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666677777777777777777777777776666776665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=69.37  Aligned_cols=44  Identities=18%  Similarity=0.163  Sum_probs=30.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666677777777777777777777777766666766665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.6e-11  Score=69.47  Aligned_cols=44  Identities=20%  Similarity=0.259  Sum_probs=31.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566667777777777777777777777777777777777665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=69.34  Aligned_cols=44  Identities=20%  Similarity=0.150  Sum_probs=31.6

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|+++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666667777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=1.9e-11  Score=69.10  Aligned_cols=45  Identities=18%  Similarity=0.228  Sum_probs=33.5

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            355666777777777777777777777777777777777777765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.18  E-value=8.3e-12  Score=78.02  Aligned_cols=53  Identities=32%  Similarity=0.642  Sum_probs=47.4

Q ss_pred             CcccCCc--chhcCCCChHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhh
Q psy11589        177 TQFVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       177 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  230 (262)
                      ++|.|+.  |++.|.....|..|++ .|.+++||.|++  |++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHH-HHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHH-hcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            6789988  9999999999999998 799999999965  999999999999998775

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.8e-11  Score=69.24  Aligned_cols=44  Identities=23%  Similarity=0.245  Sum_probs=32.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666677777777777777777777777777777777777765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.6e-11  Score=69.42  Aligned_cols=45  Identities=16%  Similarity=0.160  Sum_probs=35.4

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|+++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777888888888888888888888888888888888776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.2e-11  Score=68.87  Aligned_cols=44  Identities=18%  Similarity=0.129  Sum_probs=30.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|+++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666677777777777777777777777776667777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=69.29  Aligned_cols=44  Identities=16%  Similarity=0.160  Sum_probs=30.2

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666677777777777777777777777776667777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2e-11  Score=69.08  Aligned_cols=44  Identities=20%  Similarity=0.209  Sum_probs=30.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666677777777777777777777777776667776655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=69.60  Aligned_cols=44  Identities=23%  Similarity=0.270  Sum_probs=28.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2e-11  Score=69.06  Aligned_cols=44  Identities=16%  Similarity=0.203  Sum_probs=29.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666676677766666666666666666666666655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=69.18  Aligned_cols=44  Identities=23%  Similarity=0.314  Sum_probs=29.6

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|+++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45556666667777777777777777777666666666666665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2e-11  Score=69.02  Aligned_cols=45  Identities=18%  Similarity=0.120  Sum_probs=32.6

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            355666677777777777777777777777777777777777765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.7e-11  Score=68.61  Aligned_cols=43  Identities=19%  Similarity=0.159  Sum_probs=27.1

Q ss_pred             cccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         58 VNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        58 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      ++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455566666666666666666666666666666666666654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2e-11  Score=69.03  Aligned_cols=45  Identities=16%  Similarity=0.085  Sum_probs=33.2

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355666777777777777777777777777777777777777765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.17  E-value=2.4e-11  Score=68.68  Aligned_cols=45  Identities=18%  Similarity=0.156  Sum_probs=32.7

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            355666677777777777777777777777777777777777765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.4e-11  Score=68.71  Aligned_cols=44  Identities=20%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55667777778888888888888888888777777777777766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.1e-11  Score=68.97  Aligned_cols=44  Identities=20%  Similarity=0.258  Sum_probs=30.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|+++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.2e-11  Score=68.90  Aligned_cols=44  Identities=18%  Similarity=0.221  Sum_probs=27.6

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555566666666666666666666666666666666666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.5e-11  Score=69.53  Aligned_cols=44  Identities=20%  Similarity=0.160  Sum_probs=26.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44555556666666666666666666666666666666666554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2e-11  Score=69.08  Aligned_cols=44  Identities=18%  Similarity=0.193  Sum_probs=29.7

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666667777777777777777777766666666666665

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.3e-11  Score=67.96  Aligned_cols=38  Identities=32%  Similarity=0.485  Sum_probs=35.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      .|++++||.|++|++.|.....|..|+++|++++||+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            68899999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=69.17  Aligned_cols=44  Identities=18%  Similarity=0.179  Sum_probs=26.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|+++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555666666666666666666666666666666666554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.5e-11  Score=68.66  Aligned_cols=44  Identities=18%  Similarity=0.221  Sum_probs=32.5

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666677777777777777777777777777777777777765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2e-11  Score=69.07  Aligned_cols=44  Identities=16%  Similarity=0.105  Sum_probs=28.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666655

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.1e-11  Score=68.96  Aligned_cols=45  Identities=22%  Similarity=0.235  Sum_probs=34.0

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355667777777888888888877778888777777777777766

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=69.40  Aligned_cols=44  Identities=20%  Similarity=0.194  Sum_probs=27.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555556666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=2.2e-11  Score=68.90  Aligned_cols=44  Identities=18%  Similarity=0.206  Sum_probs=27.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.7e-11  Score=68.52  Aligned_cols=44  Identities=20%  Similarity=0.194  Sum_probs=32.5

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.6e-11  Score=68.59  Aligned_cols=44  Identities=20%  Similarity=0.251  Sum_probs=32.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666677777777777777777777777777777777777765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.9e-11  Score=68.35  Aligned_cols=44  Identities=18%  Similarity=0.252  Sum_probs=30.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666677777777777777777777777776667776665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=69.32  Aligned_cols=44  Identities=18%  Similarity=0.248  Sum_probs=28.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=68.76  Aligned_cols=44  Identities=18%  Similarity=0.175  Sum_probs=32.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            55666677777777777777777777777777777777777765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=68.74  Aligned_cols=44  Identities=18%  Similarity=0.178  Sum_probs=28.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=3.2e-11  Score=68.19  Aligned_cols=44  Identities=20%  Similarity=0.169  Sum_probs=30.5

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=3.9e-11  Score=67.82  Aligned_cols=44  Identities=18%  Similarity=0.157  Sum_probs=31.6

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.6e-11  Score=67.97  Aligned_cols=45  Identities=20%  Similarity=0.259  Sum_probs=31.9

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355666677777777777777777777777777777777777654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.14  E-value=1.4e-11  Score=66.19  Aligned_cols=36  Identities=31%  Similarity=0.512  Sum_probs=29.9

Q ss_pred             HHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       226 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |+++|++++||+|+.|++.|.+.+.|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567788888888888888888888888888888775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.5e-11  Score=68.07  Aligned_cols=37  Identities=27%  Similarity=0.505  Sum_probs=34.7

Q ss_pred             HHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       226 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |+++|++++||+|++|++.|.+.+.|..|+++|++++
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKS   37 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCS
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCC
Confidence            5678999999999999999999999999999999874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=68.43  Aligned_cols=44  Identities=16%  Similarity=0.201  Sum_probs=30.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666677777777777777777777777777677777665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4e-11  Score=67.77  Aligned_cols=44  Identities=18%  Similarity=0.145  Sum_probs=30.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45556666677777777777777777777777777777777665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.5e-11  Score=67.50  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=29.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhh-hcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLD-IHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|+.|++.|.....|..|++ +|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4556666667777777777777777777776 6666666666665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=6.4e-11  Score=69.44  Aligned_cols=46  Identities=15%  Similarity=0.263  Sum_probs=29.0

Q ss_pred             CCCccceecCCCcccccchhHHHhhhh-hcCCCCeeecCcchhhccC
Q psy11589         61 INKKVSYKCPDCSVIVVSYSGFKSHLD-IHNVEKEYCCHICKKVFLR  106 (262)
Q Consensus        61 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  106 (262)
                      +.++++|.|+.|++.|.....|..|++ +|.++++|.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            345566666666666666666666665 5666666666666666653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.7e-11  Score=66.36  Aligned_cols=44  Identities=23%  Similarity=0.263  Sum_probs=29.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666676677666666666666666666666666553

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.3e-11  Score=68.08  Aligned_cols=38  Identities=24%  Similarity=0.465  Sum_probs=35.6

Q ss_pred             HHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        225 EHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       225 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|+++|++++||+|++|++.|.+.+.|..|+++|++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS   39 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCS
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCC
Confidence            37889999999999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.9e-11  Score=64.39  Aligned_cols=34  Identities=18%  Similarity=0.484  Sum_probs=20.7

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +|++++||.|++|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4556666666666666666666666666666553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.1e-11  Score=63.16  Aligned_cols=34  Identities=24%  Similarity=0.386  Sum_probs=27.0

Q ss_pred             hhCCCCCccCCC--CCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNM--CPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .+++++||+|+.  |+++|.+++.|..|+++|+|++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            356788888876  8888888888888888888764

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-10  Score=65.30  Aligned_cols=42  Identities=21%  Similarity=0.262  Sum_probs=28.2

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            455566666677777777777777777776666666666665

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.4e-11  Score=68.06  Aligned_cols=38  Identities=24%  Similarity=0.491  Sum_probs=35.5

Q ss_pred             HHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        225 EHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       225 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~   39 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD   39 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCC
Confidence            47889999999999999999999999999999999874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.05  E-value=1.3e-10  Score=63.15  Aligned_cols=37  Identities=32%  Similarity=0.526  Sum_probs=31.6

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhCCCCCccC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVC  238 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  238 (262)
                      |++++||.|++||+.|.+.+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5678889999999999999999999999999988876

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.7e-10  Score=65.15  Aligned_cols=44  Identities=23%  Similarity=0.283  Sum_probs=32.4

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHI   99 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   99 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            35566677777777777777777777777777777777777753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.04  E-value=1.9e-10  Score=63.56  Aligned_cols=42  Identities=17%  Similarity=0.248  Sum_probs=28.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|+++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            345566667777777777777777777777777777777663

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=64.97  Aligned_cols=44  Identities=18%  Similarity=0.218  Sum_probs=33.0

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHI   99 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   99 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35666777777888888888888888888877777777777753

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=8.2e-11  Score=67.14  Aligned_cols=42  Identities=29%  Similarity=0.621  Sum_probs=25.3

Q ss_pred             hcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccc
Q psy11589        118 HENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGA  159 (262)
Q Consensus       118 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  159 (262)
                      |.++++|.|++|++.|.....|..|+++|.++++|.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            344555666666666666666666666666666666666653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=64.98  Aligned_cols=42  Identities=21%  Similarity=0.264  Sum_probs=30.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666677777777777777777777777777777777765

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.7e-10  Score=65.08  Aligned_cols=42  Identities=19%  Similarity=0.220  Sum_probs=28.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455666666677777777777777777777666666666665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.9e-10  Score=64.92  Aligned_cols=44  Identities=14%  Similarity=0.217  Sum_probs=32.9

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCc
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHI   99 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   99 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35666777777888888888888888888877777777777753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.1e-10  Score=64.68  Aligned_cols=42  Identities=21%  Similarity=0.307  Sum_probs=29.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            556666677777777777777777777777777777777665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.1e-10  Score=64.71  Aligned_cols=43  Identities=21%  Similarity=0.259  Sum_probs=31.1

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            3556666777777777777777777777777777777777775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=64.97  Aligned_cols=42  Identities=17%  Similarity=0.222  Sum_probs=30.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666677777777777777777777777777777777765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=65.02  Aligned_cols=43  Identities=23%  Similarity=0.176  Sum_probs=32.8

Q ss_pred             cccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         58 VNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        58 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      ++.|.++++|.|..|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4456677778888888888888888888877777777777766

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2e-10  Score=64.84  Aligned_cols=42  Identities=19%  Similarity=0.221  Sum_probs=27.6

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=9.9e-11  Score=65.78  Aligned_cols=42  Identities=26%  Similarity=0.453  Sum_probs=26.5

Q ss_pred             hhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCccc
Q psy11589        117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCG  158 (262)
Q Consensus       117 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  158 (262)
                      .|.++++|.|++|++.|.....|..|+++|.++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            355566666666666666666666666666666666666654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2e-10  Score=64.77  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=31.0

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3556666777777777777777777777777777777777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.4e-10  Score=64.52  Aligned_cols=43  Identities=19%  Similarity=0.264  Sum_probs=31.5

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3556667777777777777777777777777777777777775

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.03  E-value=1.5e-10  Score=61.12  Aligned_cols=33  Identities=21%  Similarity=0.424  Sum_probs=20.7

Q ss_pred             hCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       230 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |++++||.|++|++.|.+.+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            556666666666666666666666666666553

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.2e-10  Score=64.64  Aligned_cols=43  Identities=21%  Similarity=0.214  Sum_probs=31.2

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|..|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3556666777777777777777777777777777777777775

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=1.9e-10  Score=64.88  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=26.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555666666666666666666666666666666666654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.3e-10  Score=64.56  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=29.5

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666677777777777777777777777777777777665

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.1e-10  Score=64.73  Aligned_cols=43  Identities=23%  Similarity=0.281  Sum_probs=30.4

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3555666677777777777777777777777777777777765

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=64.86  Aligned_cols=42  Identities=24%  Similarity=0.335  Sum_probs=30.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            556666777777777777777777777777777777777775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.5e-10  Score=64.42  Aligned_cols=42  Identities=24%  Similarity=0.281  Sum_probs=29.5

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455666677777777777777777777777777777777665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.9e-10  Score=64.86  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=25.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            445555566666666666666666666666666666666654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=63.78  Aligned_cols=43  Identities=19%  Similarity=0.138  Sum_probs=31.6

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3556667777777777777777777777777777777777763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.7e-10  Score=63.59  Aligned_cols=42  Identities=17%  Similarity=0.235  Sum_probs=27.7

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            455566666677777777777666676676666666666663

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.01  E-value=1.2e-10  Score=70.38  Aligned_cols=52  Identities=15%  Similarity=0.415  Sum_probs=32.4

Q ss_pred             ccccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhH
Q psy11589         55 AIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRN  109 (262)
Q Consensus        55 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  109 (262)
                      ..|++.|.++++|.|+.|++.|.....|.   +.|.++++|.|+.|++.|....+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            44555666666666666666666666554   55666666666666666655544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=63.91  Aligned_cols=43  Identities=14%  Similarity=0.216  Sum_probs=30.7

Q ss_pred             cccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         56 IHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        56 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3556666777777777777777777777777777777777663

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.1e-10  Score=62.62  Aligned_cols=41  Identities=12%  Similarity=0.291  Sum_probs=33.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55667778888888888888888888888888888888776

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.6e-10  Score=61.86  Aligned_cols=35  Identities=20%  Similarity=0.399  Sum_probs=28.9

Q ss_pred             HhhCCCCCccCCCCCcccCCh-HHHHHHHHhhccCC
Q psy11589        228 AVHTTDRPFVCNMCPSTFKLK-KHLRQHYKVHLKME  262 (262)
Q Consensus       228 ~~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~H~~~~  262 (262)
                      ++|++++||+|+.|++.|.+. +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            357788888888888888888 88888888888775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=64.28  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=25.7

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            445555566666666666666666666666666666666554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.00  E-value=2e-10  Score=60.70  Aligned_cols=32  Identities=41%  Similarity=0.792  Sum_probs=18.2

Q ss_pred             hCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       230 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |++++||.|++|++.|.+.+.|..|+++|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            45555555555555555555555555555554

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=64.27  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=31.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456667777777777777777777777777777777777775

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.5e-10  Score=63.13  Aligned_cols=42  Identities=12%  Similarity=0.221  Sum_probs=29.3

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            555666667777777777777777777777777777776663

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=65.45  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=32.0

Q ss_pred             cccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         58 VNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        58 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      ++.|.++++|.|..|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456667777787788777777777777777777777777766

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.7e-10  Score=60.53  Aligned_cols=34  Identities=21%  Similarity=0.499  Sum_probs=26.4

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +|.+++||+|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4677778888888888888888888888887764

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=63.79  Aligned_cols=42  Identities=17%  Similarity=0.327  Sum_probs=28.9

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666777777777777777777777777776666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3e-10  Score=64.08  Aligned_cols=42  Identities=19%  Similarity=0.254  Sum_probs=25.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555556666666666666666666666666666666554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=63.08  Aligned_cols=41  Identities=12%  Similarity=0.206  Sum_probs=24.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44455556666666666666666666666666666666555

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.8e-10  Score=63.60  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=30.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666777777777777777777777777777777777765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=2.9e-12  Score=83.14  Aligned_cols=56  Identities=14%  Similarity=0.232  Sum_probs=42.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      .|++++||.|++|++.|.....|..|+++|++++||+|..|..    ...|..|.++|.|
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            5788888888888888888888888888888888888876653    3444555555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=4.9e-10  Score=59.50  Aligned_cols=34  Identities=26%  Similarity=0.532  Sum_probs=25.9

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +|++++||.|++|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4667777888888888888888888888777764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.1e-10  Score=61.00  Aligned_cols=34  Identities=21%  Similarity=0.332  Sum_probs=25.8

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|++++||+|++|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4667777778778877877777877877777764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.7e-10  Score=63.70  Aligned_cols=42  Identities=19%  Similarity=0.220  Sum_probs=27.2

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCC-CCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNV-EKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+ +++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45555666666666666666666666666666666 6666664

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.3e-10  Score=62.28  Aligned_cols=34  Identities=18%  Similarity=0.418  Sum_probs=25.8

Q ss_pred             HhhCCCCCccCCCCCcccCChHHHHHH-HHhhccC
Q psy11589        228 AVHTTDRPFVCNMCPSTFKLKKHLRQH-YKVHLKM  261 (262)
Q Consensus       228 ~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~  261 (262)
                      ++|++++||+|+.|++.|.+.+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467777778888888888877888888 7777765

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.97  E-value=4.9e-10  Score=61.80  Aligned_cols=41  Identities=10%  Similarity=0.158  Sum_probs=28.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34556666777777777777777777777777777776665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=60.08  Aligned_cols=34  Identities=24%  Similarity=0.573  Sum_probs=25.9

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|.+++||+|++|++.|.+.+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4677777888888888877778888877777764

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.8e-10  Score=64.19  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=28.1

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666677777777777777777776666666666664

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=4e-10  Score=62.20  Aligned_cols=41  Identities=22%  Similarity=0.306  Sum_probs=30.0

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45566677777777777777777777777777777777665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.7e-10  Score=62.91  Aligned_cols=42  Identities=17%  Similarity=0.233  Sum_probs=31.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455667777777777777777777777777777777777775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.9e-10  Score=62.24  Aligned_cols=41  Identities=20%  Similarity=0.351  Sum_probs=27.8

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44556666677777777777777777777777766666655

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=8.1e-10  Score=66.35  Aligned_cols=40  Identities=25%  Similarity=0.338  Sum_probs=35.8

Q ss_pred             hcCCCCcccccc--cccccCChHHHHHHH-HhhCCCCCccCCC
Q psy11589        201 SHTIHQKSICDV--CGKEFRMKRQLKEHM-AVHTTDRPFVCNM  240 (262)
Q Consensus       201 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  240 (262)
                      ..++++||.|+.  |+++|...+.|..|+ ++|++++||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            468899999975  999999999999997 6899999999865

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.93  E-value=5.9e-10  Score=60.40  Aligned_cols=33  Identities=24%  Similarity=0.543  Sum_probs=30.5

Q ss_pred             hCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       230 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |++++||.|++||+.|.+.+.|..|+++|++++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   33 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDR   33 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCc
Confidence            678999999999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=7.4e-10  Score=58.83  Aligned_cols=34  Identities=26%  Similarity=0.670  Sum_probs=26.1

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|.+++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3567778888888888888888888888887764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.5e-10  Score=62.31  Aligned_cols=41  Identities=17%  Similarity=0.283  Sum_probs=28.4

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      |++.|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45566666677777777777777777777777776666666

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=7e-10  Score=61.86  Aligned_cols=42  Identities=19%  Similarity=0.217  Sum_probs=29.6

Q ss_pred             ccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         57 HVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        57 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      |++.|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            445566677777777777777777777777777777777663

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.92  E-value=8.4e-10  Score=58.13  Aligned_cols=35  Identities=17%  Similarity=0.316  Sum_probs=32.1

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP  235 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  235 (262)
                      +|+++++|.|++|++.|.+.+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            37889999999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.91  E-value=1e-09  Score=57.07  Aligned_cols=32  Identities=25%  Similarity=0.359  Sum_probs=24.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCCCcc
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDRPFV  237 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  237 (262)
                      +||.|++||+.|...+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777777764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.2e-09  Score=62.17  Aligned_cols=44  Identities=11%  Similarity=0.079  Sum_probs=33.2

Q ss_pred             ccccCCCccceecC--CCcccccchhHHHhhhhhcCCCCeeecCcc
Q psy11589         57 HVNNINKKVSYKCP--DCSVIVVSYSGFKSHLDIHNVEKEYCCHIC  100 (262)
Q Consensus        57 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (262)
                      +.+.|.++++|.|.  .|++.|.....|..|+++|.++++|.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34556677778886  788888888888888888877777877766

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.91  E-value=9.5e-10  Score=57.96  Aligned_cols=35  Identities=23%  Similarity=0.449  Sum_probs=32.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP  235 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  235 (262)
                      .|++++||.|++|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            37889999999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.1e-09  Score=58.57  Aligned_cols=35  Identities=26%  Similarity=0.478  Sum_probs=32.9

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRP  235 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  235 (262)
                      .|++++||.|++|++.|...+.|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            68899999999999999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=60.95  Aligned_cols=41  Identities=17%  Similarity=0.255  Sum_probs=30.9

Q ss_pred             cccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         58 VNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        58 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      ...|.++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            34566777788888888888888888888777777777775

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.88  E-value=1.4e-09  Score=60.26  Aligned_cols=39  Identities=13%  Similarity=0.193  Sum_probs=28.3

Q ss_pred             cCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         60 NINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        60 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      .|+++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            455667777777777777777777777777777777775

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.88  E-value=8.3e-10  Score=62.85  Aligned_cols=32  Identities=28%  Similarity=0.632  Sum_probs=15.6

Q ss_pred             cCCCCcccccccccccCChHHHHHHHH-hhCCC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMA-VHTTD  233 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  233 (262)
                      |++++||.|.+|++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            444455555555555555555555554 44443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=61.10  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=28.8

Q ss_pred             cccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecC
Q psy11589         58 VNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCH   98 (262)
Q Consensus        58 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (262)
                      ++.|.++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            34556667777777777777777777777777777777765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.87  E-value=1.4e-09  Score=58.10  Aligned_cols=33  Identities=21%  Similarity=0.544  Sum_probs=26.1

Q ss_pred             hCCCCCccCCC--CCcccCChHHHHHHHHhhccCC
Q psy11589        230 HTTDRPFVCNM--CPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       230 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |++++||.|++  ||+.|.+.+.|..|+++|+|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            66778888874  8888888888888888888775

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.86  E-value=1.1e-09  Score=58.55  Aligned_cols=36  Identities=22%  Similarity=0.266  Sum_probs=32.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      |++ .|++++||.|++|++.|.....|..|+++|+++
T Consensus         2 H~~-~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSS-TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCC-cCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            455 789999999999999999999999999999875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=2.3e-09  Score=58.69  Aligned_cols=38  Identities=16%  Similarity=0.267  Sum_probs=29.4

Q ss_pred             cCCCccceecCCCcccccchhHHHhhhhhcCCCCeeec
Q psy11589         60 NINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCC   97 (262)
Q Consensus        60 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (262)
                      .|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45667778888888888888888888888887777766

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.83  E-value=1.9e-10  Score=65.31  Aligned_cols=38  Identities=29%  Similarity=0.580  Sum_probs=30.0

Q ss_pred             HHHHhhCCCCCccCC--CCCcccCChHHHHHHHHhhccCC
Q psy11589        225 EHMAVHTTDRPFVCN--MCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       225 ~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|+.+|++++||+|+  .||+.|...+.|..|+++|+|++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            455568888888885  68888888888888888888875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.82  E-value=3.2e-09  Score=55.11  Aligned_cols=29  Identities=31%  Similarity=0.666  Sum_probs=27.5

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|++||+.|.+.+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999975

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=4.1e-09  Score=63.30  Aligned_cols=34  Identities=29%  Similarity=0.554  Sum_probs=30.6

Q ss_pred             hhCCCCCccCCC--CCcccCChHHHHHHH-HhhccCC
Q psy11589        229 VHTTDRPFVCNM--CPSTFKLKKHLRQHY-KVHLKME  262 (262)
Q Consensus       229 ~h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~  262 (262)
                      ..+++|||+|++  |+++|.+.++|..|+ ++|++++
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEK   57 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDL   57 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCC
Confidence            357899999976  999999999999998 6899985

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=2.9e-09  Score=57.20  Aligned_cols=35  Identities=23%  Similarity=0.438  Sum_probs=22.0

Q ss_pred             cCCCCccccc--ccccccCChHHHHHHHHhhCCCCCc
Q psy11589        202 HTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       202 H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      |++++||.|+  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3455666666  3666666666666666666666655

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=4.3e-09  Score=56.34  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=30.2

Q ss_pred             hcCCCCcccccc--cccccCChHHHHHHHHhhCCC
Q psy11589        201 SHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       201 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      .+++++||.|++  |++.|..++.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999986  999999999999999999986

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=3.7e-09  Score=56.75  Aligned_cols=33  Identities=30%  Similarity=0.579  Sum_probs=30.7

Q ss_pred             hCCCCCccCC--CCCcccCChHHHHHHHHhhccCC
Q psy11589        230 HTTDRPFVCN--MCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       230 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |++++||.|+  .|++.|.+.+.|..|+++|++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            6789999999  59999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.78  E-value=3.9e-09  Score=53.23  Aligned_cols=30  Identities=20%  Similarity=0.481  Sum_probs=22.8

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ++||.|+.||+.|.+...|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            367778888888888888888887777764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.77  E-value=6.3e-09  Score=52.01  Aligned_cols=29  Identities=38%  Similarity=0.953  Sum_probs=22.1

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+.|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46778888888888888888887777764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=5.2e-09  Score=55.36  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=31.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .|.+++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5889999999999999999999999999998874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.75  E-value=4e-09  Score=52.82  Aligned_cols=29  Identities=31%  Similarity=0.613  Sum_probs=22.4

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+.||+.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46778888888888888888888887764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=8.1e-09  Score=54.60  Aligned_cols=34  Identities=41%  Similarity=0.779  Sum_probs=31.3

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .|.++++|.|++|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.2e-09  Score=66.00  Aligned_cols=56  Identities=18%  Similarity=0.212  Sum_probs=30.6

Q ss_pred             ccccccCCCccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHH
Q psy11589         55 AIHVNNINKKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCH  113 (262)
Q Consensus        55 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  113 (262)
                      ..|+..+.+++++.|..|++.|. ...|..|+ .+.+++++.|+.|++.|. ...|..|
T Consensus         6 ~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H   61 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTH   61 (75)
T ss_dssp             SCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTH
T ss_pred             HhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHH
Confidence            44555555555555655555552 55555555 555555555555555544 3555555

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.74  E-value=4.5e-09  Score=55.40  Aligned_cols=32  Identities=22%  Similarity=0.498  Sum_probs=25.1

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      +.+++||.|++||++|.+++.|.+|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46778888888888888888888887       677764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=7.6e-09  Score=54.75  Aligned_cols=34  Identities=32%  Similarity=0.519  Sum_probs=31.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .|++++||.|++|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5889999999999999999999999999998864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.73  E-value=6.5e-09  Score=51.92  Aligned_cols=29  Identities=24%  Similarity=0.629  Sum_probs=23.0

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+.|++.|.+...|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47788888888888888888888887764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.5e-09  Score=55.00  Aligned_cols=34  Identities=24%  Similarity=0.410  Sum_probs=30.9

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .|++++||.|++|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.73  E-value=8.7e-09  Score=52.89  Aligned_cols=30  Identities=33%  Similarity=0.679  Sum_probs=23.7

Q ss_pred             CCCccCC--CCCcccCChHHHHHHHHhhccCC
Q psy11589        233 DRPFVCN--MCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       233 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ++||.|+  .||+.|.+.+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678887  78888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.72  E-value=8e-09  Score=51.56  Aligned_cols=29  Identities=24%  Similarity=0.560  Sum_probs=23.6

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+.|++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888888774

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.72  E-value=1e-08  Score=62.12  Aligned_cols=41  Identities=22%  Similarity=0.330  Sum_probs=32.7

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCP  242 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  242 (262)
                      .+.+++||.|.+|++.|.....|..|+++|+++. ..+.+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            4677889999999999999999999999998864 3455544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6.2e-09  Score=55.46  Aligned_cols=34  Identities=21%  Similarity=0.324  Sum_probs=31.0

Q ss_pred             hcCCCCcccccccccccCCh-HHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMK-RQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  234 (262)
                      .|++++||.|++|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            68899999999999999999 99999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.71  E-value=8.8e-09  Score=52.47  Aligned_cols=29  Identities=31%  Similarity=0.745  Sum_probs=21.6

Q ss_pred             CCccCC--CCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCN--MCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+  .||+.|.+.+.|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            467776  77777777777777777777764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.4e-08  Score=53.68  Aligned_cols=34  Identities=29%  Similarity=0.666  Sum_probs=30.9

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .|.+++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4778899999999999999999999999998874

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=7.1e-09  Score=55.30  Aligned_cols=33  Identities=24%  Similarity=0.284  Sum_probs=30.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHH-HHhhCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEH-MAVHTTD  233 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  233 (262)
                      .|++++||.|++|++.|..++.|..| +++|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            68899999999999999999999999 8899875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=2.4e-09  Score=53.71  Aligned_cols=29  Identities=28%  Similarity=0.547  Sum_probs=21.8

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+.||+.|.+.++|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46777777777777777777777777764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1.3e-10  Score=75.25  Aligned_cols=55  Identities=16%  Similarity=0.286  Sum_probs=34.8

Q ss_pred             hcCC-CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCC
Q psy11589        173 SHTN-TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       173 ~h~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      +|.+ ++|.|++|++.|...+.|..|++ .|++++||.|..|.    ....|..|+++|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3444 56777777777777777777776 67777777775544    34445556666655

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=2.7e-09  Score=53.93  Aligned_cols=30  Identities=27%  Similarity=0.610  Sum_probs=22.6

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      ++||.|+.||+.|.+.+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            357778888888888788888887777764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.1e-08  Score=50.72  Aligned_cols=28  Identities=39%  Similarity=0.952  Sum_probs=19.0

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      ++||+|+.|++.|.+.+.|..|+++|+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3567777777777777777777776654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.64  E-value=2.4e-08  Score=50.13  Aligned_cols=28  Identities=18%  Similarity=0.396  Sum_probs=18.9

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +||.|+.||+.|.+.+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            3566777777777777777777666665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.6e-08  Score=49.64  Aligned_cols=27  Identities=26%  Similarity=0.736  Sum_probs=19.4

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      ++||.|+.||+.|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            357777777777777777777777764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.63  E-value=1.5e-08  Score=57.50  Aligned_cols=33  Identities=30%  Similarity=0.719  Sum_probs=29.8

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHH-hhccC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYK-VHLKM  261 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~  261 (262)
                      +|++++||.|.+|++.|.+...|..|++ +|+++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            5889999999999999999999999999 99886

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.61  E-value=1.6e-08  Score=49.55  Aligned_cols=27  Identities=30%  Similarity=0.674  Sum_probs=17.7

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ||+|+.||+.|.+.+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            466777777777777777777777654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=1.1e-08  Score=50.36  Aligned_cols=25  Identities=20%  Similarity=0.576  Sum_probs=16.8

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhh
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      +||+|+.||+.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5666666666666666666666665

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.60  E-value=1.3e-09  Score=56.16  Aligned_cols=30  Identities=20%  Similarity=0.344  Sum_probs=19.4

Q ss_pred             cccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      ||.|++||+.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            566666666666666666666666666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.58  E-value=3e-08  Score=52.75  Aligned_cols=34  Identities=29%  Similarity=0.676  Sum_probs=30.7

Q ss_pred             hcCCCCcccccc--cccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .|++++||.|++  |++.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478899999985  9999999999999999998874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.58  E-value=3.6e-08  Score=51.88  Aligned_cols=32  Identities=19%  Similarity=0.256  Sum_probs=27.6

Q ss_pred             hCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       230 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +.+++||+|+.||++|.+.++|.+|+.-+-++
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeECcC
Confidence            46899999999999999999999998655433

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=2.5e-08  Score=50.20  Aligned_cols=29  Identities=24%  Similarity=0.594  Sum_probs=21.2

Q ss_pred             CCccCCCCCcccCChHHHHHH-HHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQH-YKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H-~~~H~~~~  262 (262)
                      +||.|+.||+.|.+.+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            467777777777777777777 57777764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.56  E-value=1.9e-09  Score=55.58  Aligned_cols=29  Identities=28%  Similarity=0.579  Sum_probs=27.4

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||+|+.||+.|.+.+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.55  E-value=4.9e-08  Score=48.97  Aligned_cols=30  Identities=30%  Similarity=0.630  Sum_probs=25.8

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ++||.|+.|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            468899999999999999999999988764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.54  E-value=6.7e-08  Score=48.05  Aligned_cols=29  Identities=31%  Similarity=0.765  Sum_probs=24.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47889999999999999999998888764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.52  E-value=1.1e-08  Score=57.86  Aligned_cols=39  Identities=21%  Similarity=0.402  Sum_probs=32.9

Q ss_pred             HHHHHhhcCCCCccccc--ccccccCChHHHHHHHHhhCCCC
Q psy11589        195 TSHIRNSHTIHQKSICD--VCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       195 ~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ..|.. .|++++||.|+  .|++.|...+.|..|+++|++++
T Consensus         7 ~~~~~-~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHh-ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34444 68999999995  79999999999999999999874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.51  E-value=4.9e-08  Score=48.60  Aligned_cols=29  Identities=28%  Similarity=0.517  Sum_probs=23.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|++||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888887753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.8e-07  Score=56.49  Aligned_cols=32  Identities=25%  Similarity=0.366  Sum_probs=20.0

Q ss_pred             hCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       230 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +.+++||+|.+|++.|.+.+.|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            44556666666666666666666666666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=9.5e-08  Score=47.84  Aligned_cols=30  Identities=17%  Similarity=0.317  Sum_probs=23.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDRP  235 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  235 (262)
                      +||.|++|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            367888888888888888888888877653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=7.2e-08  Score=47.92  Aligned_cols=29  Identities=31%  Similarity=0.726  Sum_probs=25.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47889999999999999999999988764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.8e-08  Score=48.92  Aligned_cols=25  Identities=32%  Similarity=0.806  Sum_probs=17.8

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhh
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      +||.|+.||+.|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777777777777777777766

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.46  E-value=1.2e-07  Score=48.11  Aligned_cols=29  Identities=31%  Similarity=0.713  Sum_probs=24.3

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICD--VCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|+  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            478887  89999999999999988888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=1.3e-07  Score=48.30  Aligned_cols=30  Identities=27%  Similarity=0.470  Sum_probs=24.7

Q ss_pred             CCccccc--ccccccCChHHHHHHHHhhCCCC
Q psy11589        205 HQKSICD--VCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       205 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ++||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3678888  78888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=8.6e-08  Score=47.59  Aligned_cols=29  Identities=31%  Similarity=0.666  Sum_probs=23.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46788888888888888888888887764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=9.6e-08  Score=47.11  Aligned_cols=28  Identities=43%  Similarity=0.821  Sum_probs=23.6

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      ++||.|++|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678899999999999999999888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.2e-07  Score=46.40  Aligned_cols=27  Identities=19%  Similarity=0.429  Sum_probs=22.7

Q ss_pred             CCcccccccccccCChHHHHHHHHhhC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      ++||.|++||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468889999999999999999988874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=9.7e-08  Score=46.74  Aligned_cols=27  Identities=19%  Similarity=0.354  Sum_probs=22.4

Q ss_pred             CCcccccccccccCChHHHHHHHHhhC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      ++||.|++||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            367888889999988888888888774

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=3e-08  Score=49.50  Aligned_cols=29  Identities=31%  Similarity=0.646  Sum_probs=22.3

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            36788888888888888888888877653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.40  E-value=1.4e-07  Score=45.95  Aligned_cols=27  Identities=30%  Similarity=0.587  Sum_probs=20.7

Q ss_pred             cccccccccccCChHHHHHHHHhhCCC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      ||.|++|++.|.+...|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            578888888888888888888887763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.9e-08  Score=49.42  Aligned_cols=29  Identities=24%  Similarity=0.611  Sum_probs=23.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|+.||+.|.+...|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            57888888888888888888888887653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=2.3e-07  Score=46.46  Aligned_cols=28  Identities=21%  Similarity=0.606  Sum_probs=19.6

Q ss_pred             CcccccccccccCChHHHHHH-HHhhCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEH-MAVHTTD  233 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  233 (262)
                      +||.|+.|++.|.+.+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            357777777777777777777 5667665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.31  E-value=2.2e-07  Score=46.07  Aligned_cols=27  Identities=30%  Similarity=0.693  Sum_probs=17.0

Q ss_pred             CCccCC--CCCcccCChHHHHHHHHhhcc
Q psy11589        234 RPFVCN--MCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       234 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      +||.|+  .|++.|.+.+.|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            356666  666666666666666666653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.3e-07  Score=45.78  Aligned_cols=25  Identities=36%  Similarity=0.786  Sum_probs=18.5

Q ss_pred             CcccccccccccCChHHHHHHHHhh
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      +||.|++||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3677777777777777777777766

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.10  E-value=1.6e-06  Score=42.80  Aligned_cols=27  Identities=33%  Similarity=0.769  Sum_probs=22.4

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhCC
Q psy11589        206 QKSICD--VCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       206 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      ++|.|+  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468888  888888888888888888864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.07  E-value=8.5e-06  Score=48.85  Aligned_cols=46  Identities=20%  Similarity=0.370  Sum_probs=34.9

Q ss_pred             cccccCChHHHHHHH-HhhCCCC------CccCC--CCCcccCChHHHHHHHHhh
Q psy11589        213 CGKEFRMKRQLKEHM-AVHTTDR------PFVCN--MCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       213 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~L~~H~~~H  258 (262)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            777788877787787 3676554      68886  7888888888888888765

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.81  E-value=2.6e-05  Score=46.67  Aligned_cols=47  Identities=15%  Similarity=0.276  Sum_probs=38.3

Q ss_pred             chhcCCCChHHHHHHHhhcCCCC------ccccc--ccccccCChHHHHHHHHhh
Q psy11589        184 CGNTYKNPKALTSHIRNSHTIHQ------KSICD--VCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       184 C~~~f~~~~~l~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  230 (262)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            88888888888888865776655      78886  7999888888999998864

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.76  E-value=5.6e-05  Score=55.05  Aligned_cols=147  Identities=16%  Similarity=0.289  Sum_probs=86.3

Q ss_pred             ccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHh-H
Q psy11589         64 KVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKV-H  142 (262)
Q Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~-H  142 (262)
                      +..+.|++|...|..               |..+ .|+-.|-.. =+...+...     ...|+.|...+.....+.. -
T Consensus        16 ~~~~~C~IC~~~~~~---------------pv~~-~CgH~fC~~-Ci~~~~~~~-----~~~CP~Cr~~~~~~~~~~~~~   73 (170)
T 3hcs_A           16 ESKYECPICLMALRE---------------AVQT-PCGHRFCKA-CIIKSIRDA-----GHKCPVDNEILLENQLFPDNF   73 (170)
T ss_dssp             CGGGBCTTTCSBCSS---------------EEEC-TTSCEEEHH-HHHHHHHHH-----CSBCTTTCCBCCGGGCEECHH
T ss_pred             CCCCCCCCCChhhcC---------------cEEC-CCCCHHHHH-HHHHHHHhC-----CCCCCCCccCcchhhhhhhHH
Confidence            345889999988753               3333 366655432 233332211     1379999877655321110 0


Q ss_pred             HhhhCCCCcccc--CcccccccCcchHHHHHhhcCCCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCCh
Q psy11589        143 MRIHTGEKKYVC--ETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMK  220 (262)
Q Consensus       143 ~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~  220 (262)
                      +.....+....|  ..|+.... ...+..|...-.-.+..|+.|+..+ ....|..|+. ..-..+.-.|+.|+..+.. 
T Consensus        74 ~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~-~~C~~r~~~C~~C~~~~~~-  149 (170)
T 3hcs_A           74 AKREILSLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHIL-KDCPRRQVSCDNCAASMAF-  149 (170)
T ss_dssp             HHHHHHTSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHH-HTCTTCEEECTTTCCEEEG-
T ss_pred             HHHHHhhcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhh-hhCCCCCeECCCCCCccCH-
Confidence            111112345667  46776554 5567788765555677888888877 5667888876 4556667778888877744 


Q ss_pred             HHHHHHHHhhCCCCCc
Q psy11589        221 RQLKEHMAVHTTDRPF  236 (262)
Q Consensus       221 ~~l~~H~~~h~~~~~~  236 (262)
                      ..|..|..+++|+.++
T Consensus       150 ~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          150 EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             GGHHHHHTTCCC----
T ss_pred             HHHHhHHHhCcChhhh
Confidence            5678888888777654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.15  E-value=7.1e-05  Score=50.59  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=18.8

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhh
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      .|+|++||.|..|++.|.+.+.|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            455666666666666666666666666543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.10  E-value=0.00061  Score=46.79  Aligned_cols=76  Identities=18%  Similarity=0.331  Sum_probs=50.5

Q ss_pred             CcccCCcchhcCCCChHHHHHHHh-hcCCC-Cccccccc------ccccCChHHHHHHHHhhCCCCCccCCCCCcccCCh
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRN-SHTIH-QKSICDVC------GKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLK  248 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~-~H~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  248 (262)
                      +++.|.+|+..|.+.+.+..|... .|... +.+.+...      +..+....    +...+.+.+.|.|.+|+.+|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            678899999999999999999841 34221 22322110      12222111    12245567789999999999999


Q ss_pred             HHHHHHHH
Q psy11589        249 KHLRQHYK  256 (262)
Q Consensus       249 ~~L~~H~~  256 (262)
                      ..|..|+.
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999984

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.10  E-value=0.00037  Score=50.62  Aligned_cols=139  Identities=17%  Similarity=0.280  Sum_probs=90.1

Q ss_pred             CeeecCcchhhccChhHHHHHHHHhhcCCCcccCccccccccCchhHHhHHhhhCCCCccccCcccccccCcc---h--H
Q psy11589         93 KEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWG---S--L  167 (262)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~--l  167 (262)
                      ..+.|++|...|...                ..+ .||-.|-. .-+...+...    ...|+.|...+....   .  +
T Consensus        17 ~~~~C~IC~~~~~~p----------------v~~-~CgH~fC~-~Ci~~~~~~~----~~~CP~Cr~~~~~~~~~~~~~~   74 (170)
T 3hcs_A           17 SKYECPICLMALREA----------------VQT-PCGHRFCK-ACIIKSIRDA----GHKCPVDNEILLENQLFPDNFA   74 (170)
T ss_dssp             GGGBCTTTCSBCSSE----------------EEC-TTSCEEEH-HHHHHHHHHH----CSBCTTTCCBCCGGGCEECHHH
T ss_pred             CCCCCCCCChhhcCc----------------EEC-CCCCHHHH-HHHHHHHHhC----CCCCCCCccCcchhhhhhhHHH
Confidence            447788887765532                232 35555532 2233333221    138999988776531   1  1


Q ss_pred             HHHHhhcCCCcccCC--cchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCccc
Q psy11589        168 NVHSYSHTNTQFVCS--YCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTF  245 (262)
Q Consensus       168 ~~H~~~h~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  245 (262)
                      ..-+   ......|+  -|+.... ...|..|+.  .=..++..|+.|+..+ .+..|..|+...-..++-.|+.|+..+
T Consensus        75 ~~~i---~~l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~  147 (170)
T 3hcs_A           75 KREI---LSLMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM  147 (170)
T ss_dssp             HHHH---HTSEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE
T ss_pred             HHHH---hhcccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc
Confidence            1111   12456674  5776544 567788864  3345678899999988 677899999888888889999999877


Q ss_pred             CChHHHHHHHHhhccC
Q psy11589        246 KLKKHLRQHYKVHLKM  261 (262)
Q Consensus       246 ~~~~~L~~H~~~H~~~  261 (262)
                       ....|..|..++.|+
T Consensus       148 -~~~~l~~H~~~~~~~  162 (170)
T 3hcs_A          148 -AFEDKEIHDQNCPLA  162 (170)
T ss_dssp             -EGGGHHHHHTTCCC-
T ss_pred             -CHHHHHhHHHhCcCh
Confidence             567899999998886

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.80  E-value=0.0015  Score=44.77  Aligned_cols=23  Identities=26%  Similarity=0.404  Sum_probs=20.8

Q ss_pred             CceecccCCCCCceeeehHHHHHHHhh
Q psy11589          8 SDFVCNLCPPGSKVVVKYVHYLERHVR   34 (262)
Q Consensus         8 ~~~~C~~C~~~~~~~~~~~~~l~~H~~   34 (262)
                      +++.|.+|+.    .|.+...+..|..
T Consensus        31 ~~~~C~~C~v----~~~S~s~~~~H~~   53 (127)
T 1zu1_A           31 SDTQCKVCSA----VLISESQKLAHYQ   53 (127)
T ss_dssp             CSSEETTTTE----ECCSHHHHHHHHH
T ss_pred             CCCcCcCCCC----EeCCHHHHHHHHC
Confidence            6789999999    9999999999993

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.75  E-value=0.00036  Score=47.16  Aligned_cols=29  Identities=17%  Similarity=0.325  Sum_probs=17.4

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHh
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      .|+|++||.|..|++.|.+.+.|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            45566666666666666666666666543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.70  E-value=0.0013  Score=35.51  Aligned_cols=22  Identities=36%  Similarity=0.895  Sum_probs=11.8

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4555555555555555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.79  E-value=0.0065  Score=32.82  Aligned_cols=26  Identities=15%  Similarity=0.301  Sum_probs=23.2

Q ss_pred             CCceecccCCCCCceeeehHHHHHHHhhhc
Q psy11589          7 NSDFVCNLCPPGSKVVVKYVHYLERHVRKH   36 (262)
Q Consensus         7 ~~~~~C~~C~~~~~~~~~~~~~l~~H~~~~   36 (262)
                      ..+|.|+.|+.    .|...+.|+.||+-.
T Consensus        10 ~~~~~CPrCn~----~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           10 GGRKICPRCNA----QFRVTEALRGHMCYC   35 (49)
T ss_dssp             SSCCCCTTTCC----CCSSHHHHHHHHHHH
T ss_pred             CCceeCCcccc----cccchHHHHhhhhhc
Confidence            37899999999    999999999999853

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.16  E-value=0.0097  Score=30.07  Aligned_cols=26  Identities=23%  Similarity=0.548  Sum_probs=16.4

Q ss_pred             ccCCcchhcCCCChHHHHHHHhhcCC
Q psy11589        179 FVCSYCGNTYKNPKALTSHIRNSHTI  204 (262)
Q Consensus       179 ~~C~~C~~~f~~~~~l~~H~~~~H~~  204 (262)
                      |.||+|.+.|.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            56666666666666666666655543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.60  E-value=0.031  Score=28.22  Aligned_cols=25  Identities=32%  Similarity=0.598  Sum_probs=13.0

Q ss_pred             eecCcchhhccChhHHHHHHHHhhc
Q psy11589         95 YCCHICKKVFLRNRNLVCHIKAVHE  119 (262)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~h~  119 (262)
                      |.|++|-+.+.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            4555555555555555555544443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.47  E-value=0.11  Score=26.28  Aligned_cols=23  Identities=22%  Similarity=0.401  Sum_probs=12.7

Q ss_pred             CCccCCCCCcccCChHHHHHHHH
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      .++.|..|+-+|.+-.++..|++
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34555555555555555555543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.49  E-value=0.15  Score=24.80  Aligned_cols=24  Identities=38%  Similarity=0.840  Sum_probs=14.6

Q ss_pred             ecCcchhhccChhHHHHHHHHhhc
Q psy11589         96 CCHICKKVFLRNRNLVCHIKAVHE  119 (262)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~h~  119 (262)
                      .|..|.+.+.+..+|..|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            466666666666666666655543

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=90.52  E-value=0.017  Score=35.01  Aligned_cols=13  Identities=31%  Similarity=0.672  Sum_probs=10.3

Q ss_pred             CccCCCCCcccCC
Q psy11589        235 PFVCNMCPSTFKL  247 (262)
Q Consensus       235 ~~~C~~C~~~f~~  247 (262)
                      .|+||.||..|--
T Consensus        51 ~FkCP~CgEEFyG   63 (95)
T 2k5c_A           51 VFKCPVCGEEFYG   63 (95)
T ss_dssp             EEECTTTCCEEET
T ss_pred             hhcCCCccHHHhc
Confidence            4899999988753

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.50  E-value=0.16  Score=24.70  Aligned_cols=22  Identities=23%  Similarity=0.486  Sum_probs=18.9

Q ss_pred             ccCCCCCcccCChHHHHHHHHh
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      --|..|.+.|+...+|..|+|.
T Consensus        10 qhcrfckkkysdvknlikhire   31 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3589999999999999999864

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.02  E-value=0.65  Score=23.47  Aligned_cols=23  Identities=22%  Similarity=0.489  Sum_probs=15.7

Q ss_pred             CcccccccccccCChHHHHHHHH
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      .++.|..|+.+|.+...+..|++
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            45667777777777777777754

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=88.40  E-value=0.31  Score=27.14  Aligned_cols=20  Identities=20%  Similarity=0.604  Sum_probs=17.6

Q ss_pred             ccCCCCCcccCChHHHHHHH
Q psy11589        236 FVCNMCPSTFKLKKHLRQHY  255 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~  255 (262)
                      -.|.+|+..|..+..|+.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58999999999998898887

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=86.03  E-value=0.57  Score=25.21  Aligned_cols=10  Identities=40%  Similarity=1.072  Sum_probs=3.6

Q ss_pred             cccCcccccc
Q psy11589        152 YVCETCGASF  161 (262)
Q Consensus       152 ~~C~~C~~~f  161 (262)
                      |.|-.||+.|
T Consensus         4 Y~C~rCg~~f   13 (48)
T 4ayb_P            4 YRCGKCWKTF   13 (48)
T ss_dssp             -CCCCTTTTC
T ss_pred             EEeeccCCCc
Confidence            3333344333

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.16  E-value=0.41  Score=29.86  Aligned_cols=22  Identities=36%  Similarity=0.776  Sum_probs=11.7

Q ss_pred             ccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      ..|-+||+.|.   .|.+|+++|+|
T Consensus        22 iiClecGK~fK---~LkRHL~~~hg   43 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHS   43 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTC
T ss_pred             eEecccchhhH---HHHHHHHHccC
Confidence            35555555555   34556555444

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.87  E-value=0.19  Score=30.58  Aligned_cols=48  Identities=19%  Similarity=0.522  Sum_probs=20.9

Q ss_pred             CcccC-CcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHH
Q psy11589        177 TQFVC-SYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHM  227 (262)
Q Consensus       177 ~~~~C-~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  227 (262)
                      .+..| ..|+..+. ...|..|+. ..-..++..|..|+..+. ...|..|.
T Consensus        15 ~~v~C~~~C~~~v~-r~~l~~H~~-~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLS-RRDLPAHLQ-HDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCC-SSSSTTTTT-TSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             cccCCCccccHHhh-HhHHHhhCH-hhCCCcceECCCCCCccC-HHHHHHHH
Confidence            34455 34554443 233444443 122334455555555554 23344443

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=84.81  E-value=0.49  Score=30.64  Aligned_cols=11  Identities=36%  Similarity=0.848  Sum_probs=5.5

Q ss_pred             ccccccccccc
Q psy11589        207 KSICDVCGKEF  217 (262)
Q Consensus       207 ~~~C~~C~~~f  217 (262)
                      ||.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            44555555554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.43  E-value=0.46  Score=28.94  Aligned_cols=10  Identities=40%  Similarity=1.099  Sum_probs=3.7

Q ss_pred             cccCcccccc
Q psy11589        152 YVCETCGASF  161 (262)
Q Consensus       152 ~~C~~C~~~f  161 (262)
                      |.|-.|++.|
T Consensus        38 ~SCIDC~~~F   47 (79)
T 1wjv_A           38 LSCIDCGKDF   47 (79)
T ss_dssp             EEETTTTEEE
T ss_pred             EEecccCCee
Confidence            3333333333

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=83.89  E-value=0.55  Score=30.39  Aligned_cols=11  Identities=45%  Similarity=0.996  Sum_probs=5.2

Q ss_pred             cccCccccccc
Q psy11589        123 EHQCSVCGKAF  133 (262)
Q Consensus       123 ~~~C~~C~~~f  133 (262)
                      ++.|..||+.|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            34444444444

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=82.63  E-value=0.56  Score=25.44  Aligned_cols=13  Identities=23%  Similarity=0.473  Sum_probs=9.2

Q ss_pred             ceecCCCcccccc
Q psy11589         66 SYKCPDCSVIVVS   78 (262)
Q Consensus        66 ~~~C~~C~~~f~~   78 (262)
                      .|+|..||.++..
T Consensus         4 ~y~C~vCGyvyd~   16 (46)
T 6rxn_A            4 KYVCNVCGYEYDP   16 (46)
T ss_dssp             CEEETTTCCEECG
T ss_pred             EEECCCCCeEEeC
Confidence            4778888877753

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=82.54  E-value=0.84  Score=23.75  Aligned_cols=25  Identities=24%  Similarity=0.526  Sum_probs=17.5

Q ss_pred             ccceecCCCcccccchhHHHhhhhhc
Q psy11589         64 KVSYKCPDCSVIVVSYSGFKSHLDIH   89 (262)
Q Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h   89 (262)
                      ...+.|+.|+..+.. ..+..|...|
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhhHH
Confidence            345788888888877 4557776655

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=82.43  E-value=1.4  Score=26.80  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=26.2

Q ss_pred             cceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhccC
Q psy11589         65 VSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLR  106 (262)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  106 (262)
                      ..|.|..|+.++. +..+..|...-.+...|.|-.|+..|..
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            3477777876664 4456677655544446777777777764

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=81.81  E-value=1.1  Score=21.39  Aligned_cols=21  Identities=19%  Similarity=0.558  Sum_probs=15.7

Q ss_pred             eecCCCcccccchhHHHhhhh
Q psy11589         67 YKCPDCSVIVVSYSGFKSHLD   87 (262)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~   87 (262)
                      +.|+.|.....+...|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            678888877777777777754

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=80.92  E-value=1.2  Score=32.93  Aligned_cols=25  Identities=24%  Similarity=0.433  Sum_probs=14.5

Q ss_pred             CCccCCCCCcccCC-hHHHHHHHHhh
Q psy11589        234 RPFVCNMCPSTFKL-KKHLRQHYKVH  258 (262)
Q Consensus       234 ~~~~C~~C~~~f~~-~~~L~~H~~~H  258 (262)
                      .|.+|..|++.|.+ -..|+.|+..|
T Consensus       168 ~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          168 EDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             SCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCceeCCCCchhhcccHHHHHHHHHH
Confidence            35566666666654 55666665554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	262
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.003
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	0.003
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.004

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 7e-07
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 124 HQCSVCGKAFADITNMKVHMR-IHTGEKKYVCE 155
           + C  CGK F+   ++  H++ +HT E+ + C+
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 210 CDVCGKEFRMKRQLKEHM-AVHTTDRPFVCNM 240
           C  CGK F     L  H+  VHT++RP  C +
Sbjct: 8   CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 18/38 (47%), Positives = 21/38 (55%)

Query: 91  VEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSV 128
           V K Y C  C K F R  +L  HIK VH + R H+C V
Sbjct: 2   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.2 bits (100), Expect = 9e-07
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEK 150
           R   C VC +AFA   ++K H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 1e-06
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
              CGK+F    ++K HM++H+  + Y+CE
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
              CGK F  K+ LKEHM +H+  R ++C
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
           +H   + + C  CGKAF+  + +  H R+HTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 145 IHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           IH+GEK Y C  CG +F+    L  H   HT
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           +H+ ++P+ C  C   F     L QH +VH
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQF 179
           R HTGEK Y C  C  +F     L++H   + +  F
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 1e-04
 Identities = 7/34 (20%), Positives = 13/34 (38%)

Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
            H   + + CS C K F     + +H + +    
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 7/27 (25%), Positives = 12/27 (44%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEK 150
             C  C K F    ++  H++ H  +K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (91), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
                   ++Y C+ CG SF+    L+ H  +HT
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 8e-04
 Identities = 7/33 (21%), Positives = 12/33 (36%)

Query: 226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
                   R + C+ C  +F     L +H + H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
           +      R ++C  CGK+F+  +++  H R HTGE
Sbjct: 4   EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (89), Expect = 3e-05
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHTG 148
            QC +C + F+   ++  H+R HTG
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
           R H+GEK Y C  C A F   G++ +H     
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.003
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 117 VHENVREHQCSVCGKAFADITNMKVH-MRIHTGE 149
            H   + ++C +C   F     MK+H ++ HT  
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGEK 150
           R   C+   CGK F     ++ H R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
             R  TG K + C  C  SF+    L +H   H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM 261
                T  +PF C  C  +F    HL  H K H+ +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (86), Expect = 7e-05
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 105 LRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
           L   ++  ++K + +   E     C K F    N++ H++ H  ++
Sbjct: 2   LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 9e-05
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 92  EKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIH 146
           +K Y C  C K F        H+  +H  +R + C VCGK F    ++  HM+IH
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 213 CGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
           CGK F  K Q   HM++H   RP+ C +C   FK+K HL  H K+H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSH 174
           CGK+F   +    HM +H G + Y C  CG  F +   L  H   H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGE 149
           + H+C+   C K+++ + N+K H+R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNT 177
            +G++ +VC  C ++F    +   H   HT+T
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 118 HENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
               R   C +C  AF    N   H+++HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGE 149
           +  QC+   CGK F+   N++ H+RIHTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.003
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGE 149
           R H C+ CGKAF + + +K H  +HTGE
Sbjct: 1   RVHVCAECGKAFVESSKLKRHQLVHTGE 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTG 148
           R + C V  C + F+   ++  H+RIHTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 2/30 (6%)

Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGE 149
           R + C    C KAF    ++  H + H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.004
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 124 HQCSVCGKAFADITNMKVHMRIHT 147
           ++C  CGKAF+  + +  H RIHT
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIHT 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	262
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.79
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.54
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.53
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.47
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.46
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.41
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.38
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.37
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.37
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.37
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.35
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.35
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.3
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.25
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.24
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.19
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.18
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.17
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.17
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.15
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.03
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.95
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.95
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.94
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.85
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.85
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.8
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.79
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.67
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.57
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.57
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.53
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.49
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.42
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.4
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.39
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.34
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.12
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.12
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.11
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.98
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.97
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.94
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.93
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.93
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.84
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.8
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.79
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.77
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.76
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.73
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.73
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.68
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.48
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.48
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.46
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.46
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.46
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.33
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.17
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.12
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.1
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.07
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.02
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.98
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.98
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.91
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.84
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.48
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.45
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.33
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.31
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.98
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.59
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.57
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.37
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.2
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.56
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.53
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.37
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.14
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.05
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.37
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.12
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.84
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.69
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.33
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.28
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.14
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.86
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.83
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.59
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.13
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.63
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.34
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	90.18
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.0
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.31
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	84.74
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	84.52
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	83.88
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	83.34
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.58

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4e-20  Score=106.85  Aligned_cols=53  Identities=42%  Similarity=0.825  Sum_probs=50.8

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCCCCCccCCCCCcccCChHHHHHHHHhh
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      |+||.|+ ||+.|..+..|..|+++|+|++||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.6e-17  Score=95.74  Aligned_cols=52  Identities=33%  Similarity=0.730  Sum_probs=48.0

Q ss_pred             CcccCCcchhcCCCChHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhh
Q psy11589        177 TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       177 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      +||.|+ ||+.|.....|..|++ +|++++||.|++||++|.+.+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~-~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhh-ccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689995 9999999999999998 899999999999999999999999999887

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.1e-16  Score=82.04  Aligned_cols=37  Identities=19%  Similarity=0.395  Sum_probs=32.2

Q ss_pred             HHHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        225 EHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       225 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +|+++|++++||+|++||++|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778888899999999999999999999999998886

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.5e-15  Score=75.55  Aligned_cols=33  Identities=30%  Similarity=0.625  Sum_probs=29.0

Q ss_pred             hhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       229 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +|+|++||+|.+||++|.+.++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588888999999999999999999999988886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.1e-14  Score=76.20  Aligned_cols=37  Identities=38%  Similarity=0.851  Sum_probs=33.1

Q ss_pred             CCCcccccccccccCChHHHHHHHH-hhCCCCCccCCC
Q psy11589        204 IHQKSICDVCGKEFRMKRQLKEHMA-VHTTDRPFVCNM  240 (262)
Q Consensus       204 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  240 (262)
                      .++||.|.+||+.|...+.|.+|++ +|+|++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999976 799999999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=6.4e-15  Score=76.79  Aligned_cols=36  Identities=31%  Similarity=0.512  Sum_probs=30.8

Q ss_pred             HHHhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       226 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |.++|+|||||+|++|+++|.++++|..|+++|.++
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~v   37 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcCC
Confidence            567889999999999999999999999999888763

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.8e-14  Score=74.53  Aligned_cols=34  Identities=32%  Similarity=0.680  Sum_probs=27.2

Q ss_pred             HhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        228 AVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       228 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ++|+|++||+|.+||++|..+++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4678888888888888888888888888888765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.41  E-value=8.1e-14  Score=67.96  Aligned_cols=29  Identities=38%  Similarity=0.953  Sum_probs=24.9

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||+|++||++|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58888888888888888888888888886

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-13  Score=66.61  Aligned_cols=29  Identities=34%  Similarity=0.754  Sum_probs=25.5

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |||.|++||++|.+++.|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68889999999999999999999998886

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.4e-13  Score=69.10  Aligned_cols=33  Identities=33%  Similarity=0.497  Sum_probs=31.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +|++++||.|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=1.1e-13  Score=70.36  Aligned_cols=32  Identities=41%  Similarity=0.792  Sum_probs=21.9

Q ss_pred             hCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       230 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |+|+|||+|++|++.|.++++|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46677777777777777777777777776653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.3e-13  Score=71.01  Aligned_cols=34  Identities=18%  Similarity=0.521  Sum_probs=26.5

Q ss_pred             HhhCCCCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        228 AVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       228 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ++|+||+||+|++|+++|.++++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4688888888888888888888888887655443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=1.7e-13  Score=65.85  Aligned_cols=28  Identities=32%  Similarity=0.801  Sum_probs=23.8

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      ||||+|++|+++|..+++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=9.5e-14  Score=72.79  Aligned_cols=37  Identities=27%  Similarity=0.504  Sum_probs=34.1

Q ss_pred             HHHHhhcCCCCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        196 SHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       196 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +|++ +|++++||.|++||++|...+.|..|+++|+||
T Consensus         2 rH~~-~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCS-CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCc-ccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3666 899999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.1e-13  Score=69.75  Aligned_cols=37  Identities=30%  Similarity=0.790  Sum_probs=32.7

Q ss_pred             CCcccCCcchhcCCCChHHHHHHHhhcCCCCcccccc
Q psy11589        176 NTQFVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDV  212 (262)
Q Consensus       176 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  212 (262)
                      ++||.|++||+.|...+.|..|++.+|++++||.|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999876799999999974

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.29  E-value=5e-14  Score=77.23  Aligned_cols=40  Identities=28%  Similarity=0.612  Sum_probs=32.9

Q ss_pred             HHHHHHHhhCCCCCccCCC--CCcccCChHHHHHHHHhhccCC
Q psy11589        222 QLKEHMAVHTTDRPFVCNM--CPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       222 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      .|..|+. |+|++||+|++  |++.|...++|..|+++|+|||
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555664 88889999977  9999999999999999998886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.8e-12  Score=66.83  Aligned_cols=34  Identities=29%  Similarity=0.466  Sum_probs=32.0

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +|++++||.|.+||++|..++.|..|+++|+++.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            7999999999999999999999999999998763

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=2.3e-12  Score=65.43  Aligned_cols=32  Identities=25%  Similarity=0.505  Sum_probs=30.4

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       202 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      |++++||+|++|++.|..++.|.+|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.24  E-value=2.6e-12  Score=62.51  Aligned_cols=29  Identities=31%  Similarity=0.765  Sum_probs=26.3

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|++||+.|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=2.2e-12  Score=67.01  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=32.0

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhCC
Q psy11589        197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       197 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      |.+ .|++++||.|++|+++|..++.|.+|+++|.+
T Consensus         2 h~R-~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSS-TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCC-ccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            456 79999999999999999999999999999965

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4.6e-12  Score=64.91  Aligned_cols=33  Identities=42%  Similarity=0.989  Sum_probs=29.7

Q ss_pred             ccccc--cccccCChHHHHHHHHhhCCCCCccCCC
Q psy11589        208 SICDV--CGKEFRMKRQLKEHMAVHTTDRPFVCNM  240 (262)
Q Consensus       208 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  240 (262)
                      |.|+.  ||+.|..++.|.+|+++|+|++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67876  9999999999999999999999999974

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=7.8e-12  Score=60.99  Aligned_cols=28  Identities=21%  Similarity=0.638  Sum_probs=23.8

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhhccC
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |||.|++  ||++|...+.|.+|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5888888  888888888888888888886

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=6.3e-12  Score=60.96  Aligned_cols=29  Identities=28%  Similarity=0.589  Sum_probs=25.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|++||++|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=4.6e-12  Score=60.78  Aligned_cols=28  Identities=25%  Similarity=0.580  Sum_probs=26.1

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      |+||+|++|++.|..++.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.8e-12  Score=61.34  Aligned_cols=28  Identities=36%  Similarity=0.818  Sum_probs=24.2

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhhccC
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |||.|++  ||++|...++|.+|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6888877  888888888888888888886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=7.4e-12  Score=58.42  Aligned_cols=26  Identities=27%  Similarity=0.678  Sum_probs=19.4

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      |||+|.+||++|...+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777774

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.1e-11  Score=61.17  Aligned_cols=29  Identities=31%  Similarity=0.745  Sum_probs=23.3

Q ss_pred             CCccCC--CCCcccCChHHHHHHHHhhccCC
Q psy11589        234 RPFVCN--MCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       234 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +||.|+  .||++|...++|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  48888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.8e-11  Score=61.60  Aligned_cols=33  Identities=21%  Similarity=0.438  Sum_probs=29.1

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       201 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +|++++||.|++|++.|..++.|..|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            699999999999999999999999998655443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=9.2e-12  Score=68.05  Aligned_cols=41  Identities=20%  Similarity=0.459  Sum_probs=35.8

Q ss_pred             hHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhCCCC
Q psy11589        192 KALTSHIRNSHTIHQKSICDV--CGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       192 ~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      ..|..|+  .|++++||.|++  |++.|..++.|..|+++|+|+|
T Consensus         5 ~~l~~h~--~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSC--EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchh--hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4566666  489999999987  9999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=4.6e-11  Score=55.67  Aligned_cols=26  Identities=35%  Similarity=0.616  Sum_probs=23.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      +||+|.+||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999884

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=2.6e-10  Score=56.35  Aligned_cols=29  Identities=34%  Similarity=0.728  Sum_probs=23.6

Q ss_pred             CCCccCCC--CCcccCChHHHHHHHHhhccC
Q psy11589        233 DRPFVCNM--CPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       233 ~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      |+||.|++  ||++|+..++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888877  888888888888888888764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.6e-10  Score=55.49  Aligned_cols=28  Identities=29%  Similarity=0.604  Sum_probs=24.8

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhCCC
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +||.|++  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5889988  999999999999999999886

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=1.5e-10  Score=55.75  Aligned_cols=27  Identities=30%  Similarity=0.803  Sum_probs=22.6

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhhcc
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~  260 (262)
                      |||+|++  |+++|.+.++|.+|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888877  88888888888888888876

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.8e-10  Score=55.49  Aligned_cols=28  Identities=36%  Similarity=0.784  Sum_probs=25.0

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhCCC
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +||.|++  ||++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899987  999999999999999999886

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=8.6e-10  Score=54.19  Aligned_cols=29  Identities=31%  Similarity=0.713  Sum_probs=25.0

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhCCCC
Q psy11589        206 QKSICD--VCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       206 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +||.|+  .||+.|...+.|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            588895  59999999999999999999885

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.6e-10  Score=53.10  Aligned_cols=26  Identities=35%  Similarity=0.834  Sum_probs=22.0

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhhc
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H~  259 (262)
                      +||.|++  ||++|+..++|.+|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888877  8888888888888888885

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=5.3e-10  Score=57.04  Aligned_cols=32  Identities=31%  Similarity=0.784  Sum_probs=28.1

Q ss_pred             ccCCc--chhcCCCChHHHHHHHhhcCCCCccccc
Q psy11589        179 FVCSY--CGNTYKNPKALTSHIRNSHTIHQKSICD  211 (262)
Q Consensus       179 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~  211 (262)
                      |.|+.  |++.|...+.|.+|++ +|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCCEeCC
Confidence            67876  9999999999999998 79999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-09  Score=48.25  Aligned_cols=26  Identities=31%  Similarity=0.735  Sum_probs=18.2

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      |.+|+.|++.|+.+..|..|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=7.4e-09  Score=51.00  Aligned_cols=29  Identities=28%  Similarity=0.508  Sum_probs=24.1

Q ss_pred             CCcccccc--cccccCChHHHHHHHHhhCCC
Q psy11589        205 HQKSICDV--CGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       205 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      |+||.|++  |++.|...+.|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888887  888888888888888888753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=3.7e-09  Score=50.82  Aligned_cols=27  Identities=30%  Similarity=0.685  Sum_probs=23.4

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhCC
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  232 (262)
                      +||.|++  |++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888977  99999999999999998876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=1.6e-08  Score=45.99  Aligned_cols=27  Identities=33%  Similarity=0.912  Sum_probs=16.9

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      |+||.|++||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            456666666666666666666666653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.4e-08  Score=45.82  Aligned_cols=29  Identities=31%  Similarity=0.709  Sum_probs=19.2

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ++||+|..|.+...+.+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            45666666666666666666666666653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.7e-08  Score=44.36  Aligned_cols=26  Identities=50%  Similarity=0.855  Sum_probs=21.6

Q ss_pred             cccccccccccCChHHHHHHHHhhCC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      |.+|++|++.|+.+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56788888888888888888888875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.3e-08  Score=48.28  Aligned_cols=26  Identities=31%  Similarity=0.726  Sum_probs=19.9

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhC
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  231 (262)
                      +||.|++  ||++|...+.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4777777  8888888888888887774

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6.5e-08  Score=43.89  Aligned_cols=27  Identities=22%  Similarity=0.579  Sum_probs=23.0

Q ss_pred             ccCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      |.|++||......+-|..|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778888888888888888888888875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=6.8e-08  Score=43.93  Aligned_cols=27  Identities=30%  Similarity=0.733  Sum_probs=24.7

Q ss_pred             CCcccccccccccCChHHHHHHHHhhC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999884

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=8.7e-08  Score=44.19  Aligned_cols=27  Identities=30%  Similarity=0.634  Sum_probs=13.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhCC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      +||.|++|+..|..+..+.-|+++|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            445555555555555555555554443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=8.7e-08  Score=43.16  Aligned_cols=29  Identities=31%  Similarity=0.501  Sum_probs=25.7

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      ++||+|..|.+.-.+.+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999999999999999999999874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.6e-07  Score=43.38  Aligned_cols=27  Identities=30%  Similarity=0.731  Sum_probs=22.9

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhhcc
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~  260 (262)
                      |||.|.+  |+++++..++|+.|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5888877  88999999999999988765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.2e-07  Score=44.73  Aligned_cols=30  Identities=33%  Similarity=0.823  Sum_probs=23.1

Q ss_pred             cccccccccccCChHHHHHHHHhhCCCCCc
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTTDRPF  236 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  236 (262)
                      ...|..||+.|...-.|.+|...|++++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            456777888888877888887788888776

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.5e-07  Score=42.64  Aligned_cols=29  Identities=28%  Similarity=0.646  Sum_probs=25.0

Q ss_pred             CCCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        233 DRPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       233 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ++||.|++|+..|..+..+.-|+|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57899999999999999999999988763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.9e-07  Score=40.79  Aligned_cols=24  Identities=46%  Similarity=0.837  Sum_probs=12.6

Q ss_pred             cccccccccCChHHHHHHHHhhCC
Q psy11589        209 ICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       209 ~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      .|.+||+.|...+.|++|..+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=6.2e-07  Score=40.13  Aligned_cols=27  Identities=30%  Similarity=0.495  Sum_probs=25.0

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      ...|..||++|...+.|.+|...|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999999986

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.12  E-value=1.5e-06  Score=38.22  Aligned_cols=26  Identities=27%  Similarity=0.437  Sum_probs=17.2

Q ss_pred             cCCCCCcccCChHHHHHHHHhhccCC
Q psy11589        237 VCNMCPSTFKLKKHLRQHYKVHLKME  262 (262)
Q Consensus       237 ~C~~C~~~f~~~~~L~~H~~~H~~~~  262 (262)
                      +|+.|.++|.++.-|..|.|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666666666666666666666664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.7e-06  Score=39.36  Aligned_cols=27  Identities=19%  Similarity=0.428  Sum_probs=22.4

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      +||+|.+|.+.....++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            588899998888888999999877554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.5e-06  Score=38.75  Aligned_cols=26  Identities=23%  Similarity=0.637  Sum_probs=20.9

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhc
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      +||+|..|++.-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.2e-06  Score=38.75  Aligned_cols=24  Identities=38%  Similarity=0.804  Sum_probs=17.9

Q ss_pred             CccCCCCCcccCChHHHHHHHHhh
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      ||.|..|+.+|.++.+|..||++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            677777777777777777777653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3.8e-06  Score=37.96  Aligned_cols=27  Identities=37%  Similarity=0.674  Sum_probs=18.8

Q ss_pred             ccccccccccCChHHHHHHHHhhCCCC
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      |.|+.||....-.+-|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            567777777777777777777776653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.94  E-value=3.8e-06  Score=41.83  Aligned_cols=28  Identities=29%  Similarity=0.693  Sum_probs=17.2

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +.|+|.+|++.|.+...|=-||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4466666666666666666666666544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=4.5e-06  Score=36.72  Aligned_cols=26  Identities=38%  Similarity=0.581  Sum_probs=21.1

Q ss_pred             cccccccccCChHHHHHHHHhhCCCC
Q psy11589        209 ICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       209 ~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      +|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.4e-06  Score=40.27  Aligned_cols=30  Identities=40%  Similarity=0.873  Sum_probs=20.6

Q ss_pred             cccCccccccccCchhHHhHHhhhCCCCcc
Q psy11589        123 EHQCSVCGKAFADITNMKVHMRIHTGEKKY  152 (262)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  152 (262)
                      ...|..||+.|.....|.+|...|.+++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345677777777777777777777777665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=6.2e-06  Score=37.37  Aligned_cols=27  Identities=37%  Similarity=0.635  Sum_probs=21.5

Q ss_pred             CCccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      +||+|++|.....+.++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            588888888888888888888865444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.84  E-value=4.3e-06  Score=36.17  Aligned_cols=24  Identities=33%  Similarity=0.764  Sum_probs=18.8

Q ss_pred             ccCCCCCcccCChHHHHHHHHhhc
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      |+|..|.++|..++.|.+|.|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888877764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=1.1e-05  Score=36.30  Aligned_cols=27  Identities=33%  Similarity=0.669  Sum_probs=15.2

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhccC
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      .|.|..|...|...-.|+.||-+|+||
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            455555555555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=6.9e-06  Score=40.99  Aligned_cols=26  Identities=27%  Similarity=0.738  Sum_probs=21.3

Q ss_pred             CCCCCccCCCCCcccCChHHHHHHHH
Q psy11589        231 TTDRPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       231 ~~~~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      +|.|||.|..|++.|....++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46788888888888888888888854

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.3e-05  Score=36.36  Aligned_cols=27  Identities=26%  Similarity=0.678  Sum_probs=15.0

Q ss_pred             cccCCcchhcCCCChHHHHHHHhhcCC
Q psy11589        178 QFVCSYCGNTYKNPKALTSHIRNSHTI  204 (262)
Q Consensus       178 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  204 (262)
                      ||.|..|.+...+.++|..|+++.|..
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            555555555555555555555555543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.76  E-value=1e-05  Score=36.37  Aligned_cols=25  Identities=40%  Similarity=0.851  Sum_probs=16.0

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhh
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H  258 (262)
                      .||+|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566654  666666666666666665

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=1.4e-05  Score=36.01  Aligned_cols=29  Identities=38%  Similarity=0.702  Sum_probs=25.4

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +..|.|..|...|..+..|..||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688999999999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=5.3e-06  Score=38.52  Aligned_cols=28  Identities=21%  Similarity=0.635  Sum_probs=21.4

Q ss_pred             CCccCCC--CCcccCChHHHHHHH-HhhccC
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHY-KVHLKM  261 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~  261 (262)
                      +||.|.+  |++.|++.++-..|. |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5788876  888888888888886 777654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=2.1e-05  Score=36.11  Aligned_cols=27  Identities=30%  Similarity=0.589  Sum_probs=24.5

Q ss_pred             Cceeccc--CCCCCceeeehHHHHHHHhhhccC
Q psy11589          8 SDFVCNL--CPPGSKVVVKYVHYLERHVRKHHT   38 (262)
Q Consensus         8 ~~~~C~~--C~~~~~~~~~~~~~l~~H~~~~~~   38 (262)
                      +||.|.+  |++    .+...++|+.|++.+|+
T Consensus         1 KPY~Ck~~gC~K----~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTK----RYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCC----EESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCc----ccCCHHHHHHHHHhhCC
Confidence            6899998  999    99999999999998764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.8e-05  Score=34.13  Aligned_cols=24  Identities=33%  Similarity=0.656  Sum_probs=16.9

Q ss_pred             ccccccccccCChHHHHHHHHhhC
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777777663

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.9e-05  Score=35.11  Aligned_cols=26  Identities=19%  Similarity=0.480  Sum_probs=20.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      +||+|..|.+.-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57778888877777778888877775

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.50  E-value=3.6e-05  Score=34.60  Aligned_cols=25  Identities=36%  Similarity=0.642  Sum_probs=20.6

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhh
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~~~h  230 (262)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5788875  888888888888888876

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.7e-05  Score=34.25  Aligned_cols=25  Identities=32%  Similarity=0.580  Sum_probs=16.8

Q ss_pred             CccCCCCCcccCChHHHHHHHHhhc
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      |-+|+.|+++.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4467777777777777777776664

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.48  E-value=2.5e-05  Score=36.22  Aligned_cols=21  Identities=29%  Similarity=0.789  Sum_probs=10.2

Q ss_pred             CccCCCCCcccCChHHHHHHH
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHY  255 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~  255 (262)
                      ||.|.+|++.|..+.-|.+|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            344445555554444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.48  E-value=3.8e-05  Score=34.67  Aligned_cols=28  Identities=32%  Similarity=0.646  Sum_probs=19.7

Q ss_pred             CCccCCC--CCcccCChHHHHHHHHhhccC
Q psy11589        234 RPFVCNM--CPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       234 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +||.|..  |.+.|.+-..|.+|.-+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666654  777777777777777777765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.46  E-value=5.1e-05  Score=37.64  Aligned_cols=30  Identities=40%  Similarity=0.761  Sum_probs=24.1

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCCCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTTDR  234 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  234 (262)
                      .+.|.|.+|++.|.+...|-=||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356888888888888888888888887654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=4.3e-05  Score=34.45  Aligned_cols=24  Identities=29%  Similarity=0.574  Sum_probs=17.6

Q ss_pred             cccccccccccCChHHHHHHHHhh
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      ||.|..|..+|.++.+|..||++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577777777777777777777653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=3.7e-05  Score=38.30  Aligned_cols=26  Identities=23%  Similarity=0.547  Sum_probs=23.2

Q ss_pred             CCCCcccccccccccCChHHHHHHHH
Q psy11589        203 TIHQKSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       203 ~~~~~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      ++-+||.|.+|++.|.++..+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46789999999999999999999964

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.33  E-value=3.4e-05  Score=35.73  Aligned_cols=22  Identities=23%  Similarity=0.549  Sum_probs=13.3

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      ||.|.+|++.|..+.-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            4566666666666666666643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=9.9e-05  Score=31.77  Aligned_cols=21  Identities=38%  Similarity=0.895  Sum_probs=17.5

Q ss_pred             CccCCCCCcccCChHHHHHHH
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHY  255 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~  255 (262)
                      ||+|..|...|.++.+|..||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            788888888888888888886

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.17  E-value=0.00019  Score=31.64  Aligned_cols=22  Identities=32%  Similarity=0.652  Sum_probs=18.3

Q ss_pred             CccCCCCCcccCChHHHHHHHH
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      ||+|..||+.|..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888888888888863

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=6.2e-05  Score=34.85  Aligned_cols=27  Identities=22%  Similarity=0.552  Sum_probs=17.0

Q ss_pred             Ccccccc--cccccCChHHHHHHH-HhhCC
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHM-AVHTT  232 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  232 (262)
                      +||.|+.  |.+.|++.+.-..|+ ++|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4666665  667776666666665 55554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00015  Score=32.73  Aligned_cols=24  Identities=21%  Similarity=0.456  Sum_probs=14.9

Q ss_pred             CcccccccccccCChHHHHHHHHh
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAV  229 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~  229 (262)
                      +||+|+.|.....+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            356666666666666666666654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00018  Score=30.93  Aligned_cols=22  Identities=27%  Similarity=0.782  Sum_probs=10.6

Q ss_pred             eeecCcchhhccChhHHHHHHH
Q psy11589         94 EYCCHICKKVFLRNRNLVCHIK  115 (262)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~  115 (262)
                      ||+|..|+..|..+.+|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            3444444444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00024  Score=34.85  Aligned_cols=26  Identities=27%  Similarity=0.581  Sum_probs=14.7

Q ss_pred             CCcccc--cccccccCChHHHHHHHHhh
Q psy11589        205 HQKSIC--DVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       205 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  230 (262)
                      ++||.|  +-|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            455666  33666666666666555544

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.98  E-value=0.00017  Score=32.49  Aligned_cols=28  Identities=29%  Similarity=0.498  Sum_probs=20.4

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhCCC
Q psy11589        206 QKSICDV--CGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       206 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +||.|..  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666754  778888888888887777764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00034  Score=34.31  Aligned_cols=29  Identities=34%  Similarity=0.713  Sum_probs=25.4

Q ss_pred             CCCCCccC--CCCCcccCChHHHHHHHHhhc
Q psy11589        231 TTDRPFVC--NMCPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       231 ~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~  259 (262)
                      .++|||.|  +-|+.+|.+...|..|...|.
T Consensus         2 ~ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCceecCCCCccccccchHHHHHhhhhhe
Confidence            35899999  669999999999999988774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00039  Score=30.89  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=20.0

Q ss_pred             cccccccccccCChHHHHHHHHhhC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      |-+|+.|.++.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888888874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00035  Score=33.52  Aligned_cols=23  Identities=22%  Similarity=0.140  Sum_probs=16.1

Q ss_pred             CCCCcccCChHHHHHHHHhhccC
Q psy11589        239 NMCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       239 ~~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      +.=++.|.....|..|||+|+||
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33345677777888888888776

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.48  E-value=0.0009  Score=28.82  Aligned_cols=22  Identities=32%  Similarity=0.628  Sum_probs=14.6

Q ss_pred             ccccccccccCChHHHHHHHHh
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAV  229 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~  229 (262)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5666676677766666666654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.001  Score=29.24  Aligned_cols=22  Identities=41%  Similarity=0.572  Sum_probs=19.2

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      ||+|..||+.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999998854

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0012  Score=29.10  Aligned_cols=23  Identities=26%  Similarity=0.531  Sum_probs=19.2

Q ss_pred             CccCCCCCcccCChHHHHHHHHh
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      .|+|+.|+..-..+++|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            47889998888889999988864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0016  Score=33.55  Aligned_cols=24  Identities=33%  Similarity=0.628  Sum_probs=18.8

Q ss_pred             CccCCCCCcccCChHHHHHHHHhh
Q psy11589        235 PFVCNMCPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       235 ~~~C~~C~~~f~~~~~L~~H~~~H  258 (262)
                      .|.|..||+.|+....|++|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477888888888888888887665

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0026  Score=28.04  Aligned_cols=21  Identities=29%  Similarity=0.842  Sum_probs=10.8

Q ss_pred             eecCCCcccccchhHHHhhhh
Q psy11589         67 YKCPDCSVIVVSYSGFKSHLD   87 (262)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~   87 (262)
                      |+|+.|+.....+++|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            445555555555555555544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0041  Score=29.27  Aligned_cols=25  Identities=28%  Similarity=0.590  Sum_probs=15.1

Q ss_pred             ccCCCCCcccCChHHHHHHHHhhcc
Q psy11589        236 FVCNMCPSTFKLKKHLRQHYKVHLK  260 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~~~H~~  260 (262)
                      |.|..||+.|.....+.+|-..-+|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            5666666666666666666554443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.003  Score=30.17  Aligned_cols=24  Identities=29%  Similarity=0.427  Sum_probs=17.1

Q ss_pred             ccccccccCChHHHHHHHHhhCCC
Q psy11589        210 CDVCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       210 C~~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      |+.=++.|.....|..||++|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333445688888888888888875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0058  Score=31.40  Aligned_cols=26  Identities=35%  Similarity=0.621  Sum_probs=20.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhC
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMAVHT  231 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~h~  231 (262)
                      .-|.|..||+.|.....|++|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            34788888888888888888877764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.20  E-value=0.01  Score=25.38  Aligned_cols=24  Identities=21%  Similarity=0.455  Sum_probs=21.5

Q ss_pred             eecccCCCCCceeeehHHHHHHHhhhcc
Q psy11589         10 FVCNLCPPGSKVVVKYVHYLERHVRKHH   37 (262)
Q Consensus        10 ~~C~~C~~~~~~~~~~~~~l~~H~~~~~   37 (262)
                      |.|+.|-+    .|.....+..|++.-|
T Consensus         2 ypcp~cfk----eftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFK----EFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCC----EESCHHHHHHHHHHHT
T ss_pred             cCCchhhH----HhccccCceEEEEEec
Confidence            88999999    9999999999998643

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.013  Score=27.46  Aligned_cols=26  Identities=23%  Similarity=0.556  Sum_probs=19.2

Q ss_pred             cccccccccccCChHHHHHHHHhhCC
Q psy11589        207 KSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      .|.|..||+.|..+..+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888665443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.53  E-value=0.013  Score=27.24  Aligned_cols=21  Identities=29%  Similarity=0.618  Sum_probs=13.4

Q ss_pred             cccccccccccCChHHHHHHH
Q psy11589        207 KSICDVCGKEFRMKRQLKEHM  227 (262)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~  227 (262)
                      .|.|+-||..|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            366666666666666666664

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.37  E-value=0.017  Score=26.31  Aligned_cols=27  Identities=19%  Similarity=0.511  Sum_probs=16.1

Q ss_pred             CccCC--CCCcccCChHHHHHHHHhhccC
Q psy11589        235 PFVCN--MCPSTFKLKKHLRQHYKVHLKM  261 (262)
Q Consensus       235 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~  261 (262)
                      .|.|.  .|+..|+....|..|+=.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            35553  3666666666666666666664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.036  Score=24.70  Aligned_cols=19  Identities=37%  Similarity=0.709  Sum_probs=8.5

Q ss_pred             ccccccccccCChHHHHHH
Q psy11589        208 SICDVCGKEFRMKRQLKEH  226 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H  226 (262)
                      |.|..||+...+...++-|
T Consensus         3 ftc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHH
T ss_pred             eechhHHHHHhhccCceEE
Confidence            3444444444444444444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.022  Score=25.41  Aligned_cols=25  Identities=28%  Similarity=0.584  Sum_probs=14.4

Q ss_pred             eecCcchhhccChhHHHHHHHHhhc
Q psy11589         95 YCCHICKKVFLRNRNLVCHIKAVHE  119 (262)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~h~  119 (262)
                      |.|..|++...+...+..|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            4566666666666666666555443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.37  E-value=0.032  Score=25.35  Aligned_cols=28  Identities=29%  Similarity=0.733  Sum_probs=21.9

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhCCC
Q psy11589        206 QKSICD--VCGKEFRMKRQLKEHMAVHTTD  233 (262)
Q Consensus       206 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  233 (262)
                      +.|.|+  .|+-.|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            346674  4888888888899998888875

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.024  Score=25.03  Aligned_cols=18  Identities=28%  Similarity=0.713  Sum_probs=14.1

Q ss_pred             CCcccCChHHHHHHHHhh
Q psy11589        241 CPSTFKLKKHLRQHYKVH  258 (262)
Q Consensus       241 C~~~f~~~~~L~~H~~~H  258 (262)
                      |++.|...+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            778888888888887766

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.84  E-value=0.055  Score=30.08  Aligned_cols=39  Identities=21%  Similarity=0.567  Sum_probs=26.4

Q ss_pred             CccceecCCCcccccchhHHHhhhhhcCCCCeeecCcchhhc
Q psy11589         63 KKVSYKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVF  104 (262)
Q Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  104 (262)
                      ....|.|+.|++.|.....+..   .-.....|.|..|+...
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCBC
T ss_pred             cCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCEE
Confidence            3456889999998887665543   23344568888887653

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.69  E-value=0.015  Score=28.80  Aligned_cols=10  Identities=40%  Similarity=1.046  Sum_probs=4.4

Q ss_pred             CCcccccccc
Q psy11589        205 HQKSICDVCG  214 (262)
Q Consensus       205 ~~~~~C~~C~  214 (262)
                      +.|-.|++|+
T Consensus        18 ~~P~~CPvCg   27 (37)
T d1nnqa2          18 EAPEYCPVCG   27 (37)
T ss_dssp             CCCSBCTTTC
T ss_pred             CCCCcCCCCC
Confidence            3344444444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.33  E-value=0.053  Score=27.61  Aligned_cols=26  Identities=35%  Similarity=0.608  Sum_probs=12.3

Q ss_pred             CeeecCcchhhccChhHHHHHHHHhh
Q psy11589         93 KEYCCHICKKVFLRNRNLVCHIKAVH  118 (262)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~~h  118 (262)
                      .|-.|++|+.......+|+.|+...|
T Consensus        23 qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            34445555555555555555544333

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.28  E-value=0.056  Score=25.01  Aligned_cols=25  Identities=24%  Similarity=0.382  Sum_probs=21.7

Q ss_pred             CCCceecccCCCCCceeeehHHHHHHHhh
Q psy11589          6 ENSDFVCNLCPPGSKVVVKYVHYLERHVR   34 (262)
Q Consensus         6 ~~~~~~C~~C~~~~~~~~~~~~~l~~H~~   34 (262)
                      ....|.|+-||.    .|++.+.|+.|+.
T Consensus         5 kparf~c~pcgi----rfss~stleahqt   29 (36)
T d1y0jb1           5 KPARFMCLPCGI----AFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCBCTTTCC----BCSCHHHHHHHTT
T ss_pred             cccceeccccce----eecChhHHHhhhh
Confidence            345699999999    9999999999975

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.14  E-value=0.019  Score=28.12  Aligned_cols=10  Identities=20%  Similarity=0.544  Sum_probs=4.6

Q ss_pred             CCcccccccc
Q psy11589        205 HQKSICDVCG  214 (262)
Q Consensus       205 ~~~~~C~~C~  214 (262)
                      +.|-.|++|+
T Consensus        18 ~~Pe~CPvCg   27 (36)
T d1yuza2          18 EDFEKCPICF   27 (36)
T ss_dssp             SCCSBCTTTC
T ss_pred             CCCCcCCCCC
Confidence            3444455444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.023  Score=32.27  Aligned_cols=23  Identities=26%  Similarity=0.439  Sum_probs=15.7

Q ss_pred             CcccccccccccCChHHHHHHHH
Q psy11589        206 QKSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      ..|.|..|++.|.+...|..|++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34667777777777777777754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.83  E-value=0.048  Score=25.61  Aligned_cols=26  Identities=15%  Similarity=0.602  Sum_probs=19.9

Q ss_pred             CCCCccCCCCCcccCChHHHHHHHHh
Q psy11589        232 TDRPFVCNMCPSTFKLKKHLRQHYKV  257 (262)
Q Consensus       232 ~~~~~~C~~C~~~f~~~~~L~~H~~~  257 (262)
                      |+..|.|.+|.+.++.-+++.+|.-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45568888888888888888888643

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.59  E-value=0.1  Score=26.55  Aligned_cols=24  Identities=29%  Similarity=0.670  Sum_probs=11.7

Q ss_pred             CCcccccccccccCChHHHHHHHH
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMA  228 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~  228 (262)
                      +.|-.|++|+-...+..+|.+|+.
T Consensus        22 ~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHH
Confidence            344445555555555555555544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.038  Score=31.33  Aligned_cols=26  Identities=15%  Similarity=0.360  Sum_probs=21.7

Q ss_pred             CccceecCCCcccccchhHHHhhhhh
Q psy11589         63 KKVSYKCPDCSVIVVSYSGFKSHLDI   88 (262)
Q Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~   88 (262)
                      |...|-|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44558899999999999999999864

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.63  E-value=0.071  Score=29.30  Aligned_cols=28  Identities=18%  Similarity=0.551  Sum_probs=20.2

Q ss_pred             CCcccccccccccCChHHHHHHHHhhCC
Q psy11589        205 HQKSICDVCGKEFRMKRQLKEHMAVHTT  232 (262)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  232 (262)
                      ...|+|..|...|.+...|..|+..|+.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3457777777777777777777777764

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.34  E-value=0.13  Score=24.14  Aligned_cols=30  Identities=23%  Similarity=0.511  Sum_probs=25.0

Q ss_pred             ccCCCceecccCCCCCceeeehHHHHHHHhhhcc
Q psy11589          4 KHENSDFVCNLCPPGSKVVVKYVHYLERHVRKHH   37 (262)
Q Consensus         4 ~~~~~~~~C~~C~~~~~~~~~~~~~l~~H~~~~~   37 (262)
                      ..++-.|.|.+|.+    .+..++.+-+|..+-|
T Consensus         3 kEg~~~yRC~~C~r----~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           3 KEGEHTYRCKVCSR----VYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EEETTEEECTTTCC----EESSHHHHHHHHHHHS
T ss_pred             cccCcEEEeehhhH----HHHHHHHHHHHHHhhc
Confidence            44667899999999    9999999999976543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.00  E-value=0.23  Score=27.17  Aligned_cols=32  Identities=25%  Similarity=0.511  Sum_probs=26.8

Q ss_pred             cCCCceecccCCCCCceeeehHHHHHHHhhhccCCc
Q psy11589          5 HENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMF   40 (262)
Q Consensus         5 ~~~~~~~C~~C~~~~~~~~~~~~~l~~H~~~~~~~~   40 (262)
                      .+...|+|..|..    .|.+...|..|+..|...|
T Consensus        14 ~~s~~yQC~HCd~----K~~s~~el~~hl~~hneef   45 (75)
T d1x6fa1          14 LQNSTYQCKHCDS----KLQSTAELTSHLNIHNEEF   45 (75)
T ss_dssp             CCCSCEECSSSCC----EESSHHHHHHHHHHHHHHH
T ss_pred             cCCceeeechhHH----HHhhHHHHHHHHHhccHHH
Confidence            3446799999999    9999999999999886543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.31  E-value=0.2  Score=21.61  Aligned_cols=19  Identities=32%  Similarity=0.548  Sum_probs=11.4

Q ss_pred             CCcccCChHHHHHHHHhhc
Q psy11589        241 CPSTFKLKKHLRQHYKVHL  259 (262)
Q Consensus       241 C~~~f~~~~~L~~H~~~H~  259 (262)
                      |++.|.....|..|.-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666655553

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.74  E-value=0.42  Score=22.48  Aligned_cols=23  Identities=30%  Similarity=0.713  Sum_probs=16.3

Q ss_pred             CCccCCCCCcccCChHHHHHHHH
Q psy11589        234 RPFVCNMCPSTFKLKKHLRQHYK  256 (262)
Q Consensus       234 ~~~~C~~C~~~f~~~~~L~~H~~  256 (262)
                      +.|.|..|-+-..+...|.+|+.
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHH
Confidence            45777777777777777777764

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.52  E-value=0.21  Score=25.54  Aligned_cols=20  Identities=20%  Similarity=0.604  Sum_probs=17.8

Q ss_pred             ccCCCCCcccCChHHHHHHH
Q psy11589        236 FVCNMCPSTFKLKKHLRQHY  255 (262)
Q Consensus       236 ~~C~~C~~~f~~~~~L~~H~  255 (262)
                      -+|.+|+..|+.+.+++.|+
T Consensus         7 ~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccCcccceeeeeecchHhhh
Confidence            68999999999999998887

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=83.88  E-value=0.43  Score=31.88  Aligned_cols=22  Identities=32%  Similarity=0.582  Sum_probs=11.5

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy11589        208 SICDVCGKEFRMKRQLKEHMAVH  230 (262)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~h  230 (262)
                      |+|..||+- ....+|..||+.|
T Consensus       147 YKCe~CgKY-vDie~~~~H~k~H  168 (218)
T d2czra1         147 YKCEECGKY-VDIENLEAHLREH  168 (218)
T ss_dssp             EECTTTCCE-EEGGGHHHHHHTT
T ss_pred             eehhhcCce-ecHHHHHHHHHHc
Confidence            556666543 2344555565554

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=83.34  E-value=0.26  Score=32.94  Aligned_cols=24  Identities=29%  Similarity=0.551  Sum_probs=21.0

Q ss_pred             ceecccCCCCCceeeehHHHHHHHhhhcc
Q psy11589          9 DFVCNLCPPGSKVVVKYVHYLERHVRKHH   37 (262)
Q Consensus         9 ~~~C~~C~~~~~~~~~~~~~l~~H~~~~~   37 (262)
                      -|+|..||+     +-...+|.+||+.|-
T Consensus       146 FYKCe~CgK-----YvDie~~~~H~k~HG  169 (218)
T d2czra1         146 FYKCEECGK-----YVDIENLEAHLREHG  169 (218)
T ss_dssp             EEECTTTCC-----EEEGGGHHHHHHTTT
T ss_pred             EeehhhcCc-----eecHHHHHHHHHHcC
Confidence            389999997     778999999999874

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.58  E-value=0.82  Score=20.13  Aligned_cols=19  Identities=26%  Similarity=0.510  Sum_probs=10.5

Q ss_pred             chhhccChhHHHHHHHHhh
Q psy11589        100 CKKVFLRNRNLVCHIKAVH  118 (262)
Q Consensus       100 C~~~f~~~~~l~~H~~~~h  118 (262)
                      |+..|.++.++..|..+.|
T Consensus        10 cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3          10 CDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CCCEESSHHHHHHHHHHHT
T ss_pred             cceEEeehHHHHHHHhhhc
Confidence            5555555555555554444