Psyllid ID: psy11663

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
cHHHHHHHHHHHHcccccEEEEEccccccccccccccccccEEEEEccccEEEEEEEccccEEEEcccccccccHHHHHHHHcccccHHHHHHHHcccccccccEEEcccccccccccccccccHHHHcccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccEEEEEccEEEEEEcEEEc
ccHHHHHHHHHHHcccccEEEEEcccccccccccccccccEEEEEEccccEEEEEEEccccEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHccccccHHHccccccEEEHcHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHccccHHHHHHHHHHHHHHHccccHEHEEHHccHHHHHHHHHHcccccccccccccccccHHHHHHHHccHHHHHHHHHHHHcHHHHHHHHHccccccHHHHEEcHHHEEccEEEEc
MECLIQGCNFLLRNisdeafvynrhgnpeydfqlaepnifpylLVNIGSGVsimkvesdskveriggtatgggtfwglGSLLTKAKGFDELLELAEKGDHRHADMLVrdiyggdykclglpgdliassfgrvckqdtmegqcsEADLARSLLFAISNDIGQIASLYAMMHKLKKVYfggyflrnhplsmhtISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAecgacqvsyhplsmhTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERiggtatgggtfwgLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERIggtatgggtfwglgslltKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
**CLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSV***
MECLIQGCNFLLRNISDEAFVYNRHGNPEYD**LAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSF******************ARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLR********************************SLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVSYHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAECGACQVRLGLKYIRQTSVTFI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query297 2.2.26 [Sep-21-2011]
Q9NVE7 773 Pantothenate kinase 4 OS= yes N/A 0.750 0.288 0.632 8e-82
Q4R4U1 773 Pantothenate kinase 4 OS= N/A N/A 0.750 0.288 0.632 1e-81
Q5R5F8 773 Pantothenate kinase 4 OS= yes N/A 0.750 0.288 0.628 3e-80
Q80YV4 820 Pantothenate kinase 4 OS= yes N/A 0.750 0.271 0.641 2e-77
Q923S8 773 Pantothenate kinase 4 OS= yes N/A 0.750 0.288 0.641 2e-77
Q8L5Y9 901 Pantothenate kinase 2 OS= no N/A 0.787 0.259 0.514 8e-62
Q08DA5370 Pantothenate kinase 3 OS= no N/A 0.737 0.591 0.467 1e-49
Q9H999370 Pantothenate kinase 3 OS= no N/A 0.737 0.591 0.462 1e-49
Q8R2W9370 Pantothenate kinase 3 OS= no N/A 0.737 0.591 0.462 2e-49
O80765383 Pantothenate kinase 1 OS= no N/A 0.737 0.571 0.522 8e-49
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1 Back     alignment and function desciption
 Score =  303 bits (777), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 143/226 (63%), Positives = 183/226 (80%), Gaps = 3/226 (1%)

Query: 1   MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDS 60
           M CLI+GCNF+L+NI  EAFVY +  +PE+ FQ   P+IFPYLLVNIGSGVSI+KVE++ 
Sbjct: 148 MTCLIKGCNFVLKNIPHEAFVYQKDSDPEFRFQTNHPHIFPYLLVNIGSGVSIVKVETED 207

Query: 61  KVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGL 120
           + E +GG++ GGGTFWGLG+LLTK K FDELL LA +G H + DMLVRD+YGG ++ LGL
Sbjct: 208 RFEWVGGSSIGGGTFWGLGALLTKTKKFDELLHLASRGQHSNVDMLVRDVYGGAHQTLGL 267

Query: 121 PGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGY 180
            G+LIASSFG   K  T + + S+ D+A+SLL  ISNDIGQ+A L+A +H L +VYFGG+
Sbjct: 268 SGNLIASSFG---KSATADQEFSKEDMAKSLLHMISNDIGQLACLHARLHSLDRVYFGGF 324

Query: 181 FLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAE 226
           F+R HP++M TI++SI ++SKG VQ+LFLRHEGYLGAIGAFL+GAE
Sbjct: 325 FIRGHPVTMRTITYSINFFSKGEVQALFLRHEGYLGAIGAFLKGAE 370
Plays a role in the physiological regulation of the intracellular CoA concentration.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 3EC: 3
>sp|Q4R4U1|PANK4_MACFA Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2 Back     alignment and function description
>sp|Q5R5F8|PANK4_PONAB Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1 Back     alignment and function description
>sp|Q80YV4|PANK4_MOUSE Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2 Back     alignment and function description
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1 Back     alignment and function description
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=2 Back     alignment and function description
>sp|Q08DA5|PANK3_BOVIN Pantothenate kinase 3 OS=Bos taurus GN=PANK3 PE=2 SV=1 Back     alignment and function description
>sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 OS=Homo sapiens GN=PANK3 PE=1 SV=1 Back     alignment and function description
>sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 OS=Mus musculus GN=Pank3 PE=2 SV=1 Back     alignment and function description
>sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thaliana GN=COAA PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
328703062 761 PREDICTED: pantothenate kinase 4 [Acyrth 0.760 0.296 0.796 4e-97
241304597 794 pantothenate kinase, putative [Ixodes sc 0.747 0.279 0.742 2e-94
427788741 836 Putative pantothenate kinase pank [Rhipi 0.757 0.269 0.711 2e-94
321460361 771 hypothetical protein DAPPUDRAFT_327249 [ 0.781 0.300 0.770 6e-94
340718435 790 PREDICTED: pantothenate kinase 4-like [B 0.754 0.283 0.776 2e-92
350409898 790 PREDICTED: pantothenate kinase 4-like [B 0.754 0.283 0.776 2e-92
345488440 826 PREDICTED: pantothenate kinase 4-like [N 0.781 0.280 0.726 4e-90
307212370 793 Pantothenate kinase 4 [Harpegnathos salt 0.754 0.282 0.761 7e-90
383848865 1235 PREDICTED: pantothenate kinase 4-like [M 0.757 0.182 0.756 8e-90
380012482 784 PREDICTED: LOW QUALITY PROTEIN: pantothe 0.750 0.284 0.756 4e-87
>gi|328703062|ref|XP_001952497.2| PREDICTED: pantothenate kinase 4 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 180/226 (79%), Positives = 203/226 (89%)

Query: 1   MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDS 60
           + CLI GCNFLL+NISDEAFVY+R+G+PEY+FQ A+P++FPY+LVNIGSGVSI+KVESD+
Sbjct: 142 LTCLITGCNFLLKNISDEAFVYHRNGSPEYEFQTADPHVFPYMLVNIGSGVSILKVESDN 201

Query: 61  KVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGL 120
             ERIGGTATGGGTFWGLG+LLTKAK FDELL+LAEKGDHR ADMLV+DIYGGDY+ LG+
Sbjct: 202 CYERIGGTATGGGTFWGLGTLLTKAKSFDELLDLAEKGDHRKADMLVKDIYGGDYETLGM 261

Query: 121 PGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGY 180
             DLIASSFG++C +   E   +EADLARSLLFAISNDIGQIA LYAMMH LKKVYFGGY
Sbjct: 262 HSDLIASSFGKICPRQNAESDYNEADLARSLLFAISNDIGQIACLYAMMHNLKKVYFGGY 321

Query: 181 FLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAE 226
           FLRN  LSMHTISFSIKYWS+G VQSLFLRHEGYLGAIGAFL+G E
Sbjct: 322 FLRNRSLSMHTISFSIKYWSRGTVQSLFLRHEGYLGAIGAFLKGTE 367

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|241304597|ref|XP_002407616.1| pantothenate kinase, putative [Ixodes scapularis] gi|215497214|gb|EEC06708.1| pantothenate kinase, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|427788741|gb|JAA59822.1| Putative pantothenate kinase pank [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|321460361|gb|EFX71404.1| hypothetical protein DAPPUDRAFT_327249 [Daphnia pulex] Back     alignment and taxonomy information
>gi|340718435|ref|XP_003397673.1| PREDICTED: pantothenate kinase 4-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350409898|ref|XP_003488881.1| PREDICTED: pantothenate kinase 4-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|345488440|ref|XP_003425909.1| PREDICTED: pantothenate kinase 4-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307212370|gb|EFN88165.1| Pantothenate kinase 4 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383848865|ref|XP_003700068.1| PREDICTED: pantothenate kinase 4-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|380012482|ref|XP_003690310.1| PREDICTED: LOW QUALITY PROTEIN: pantothenate kinase 4-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
ZFIN|ZDB-GENE-040426-1592 774 pank4 "pantothenate kinase 4" 0.750 0.288 0.601 3.8e-69
UNIPROTKB|E2QXZ0 773 PANK4 "Uncharacterized protein 0.750 0.288 0.584 1.1e-68
UNIPROTKB|E1BV98 771 PANK4 "Uncharacterized protein 0.750 0.289 0.592 6.5e-67
UNIPROTKB|F1MLD0 773 PANK4 "Uncharacterized protein 0.750 0.288 0.584 2.2e-66
MGI|MGI:2387466 820 Pank4 "pantothenate kinase 4" 0.750 0.271 0.579 5.8e-66
RGD|628857 773 Pank4 "pantothenate kinase 4" 0.750 0.288 0.579 5.8e-66
UNIPROTKB|I3LPY8 780 PANK4 "Uncharacterized protein 0.750 0.285 0.579 5.8e-66
UNIPROTKB|H0YA26 473 PANK4 "Pantothenate kinase 4" 0.750 0.471 0.570 1.2e-65
UNIPROTKB|Q9NVE7 773 PANK4 "Pantothenate kinase 4" 0.750 0.288 0.570 1.2e-65
UNIPROTKB|E9PHT6 734 PANK4 "Pantothenate kinase 4" 0.690 0.279 0.562 2.5e-58
ZFIN|ZDB-GENE-040426-1592 pank4 "pantothenate kinase 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 136/226 (60%), Positives = 168/226 (74%)

Query:     1 MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAEPNIFPYLLVNIGSGVSIMKVESDS 60
             M CLI+GCNF+L+NI  EAFVY +H + E+ FQ   P+IFPYLL+NIGSGVSI+KVES+ 
Sbjct:   144 MTCLIKGCNFVLKNIPHEAFVYAKHADSEFRFQNTHPDIFPYLLINIGSGVSIVKVESED 203

Query:    61 KVERIXXXXXXXXXXXXXXXXXXKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGL 120
             K ERI                  K K FDELL+LA KG H + DMLV+DIYGG Y  LGL
Sbjct:   204 KFERIGGSSIGGGTFWGLGALLTKTKRFDELLQLASKGQHTNVDMLVKDIYGGAYGSLGL 263

Query:   121 PGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGY 180
              GDLIASSFG   K  T + + S+ D+A+SLL  ISNDIGQ+A LYA +H L +VYFGG+
Sbjct:   264 TGDLIASSFG---KSATTDKEFSKEDMAKSLLHMISNDIGQLACLYAKLHNLTRVYFGGF 320

Query:   181 FLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAE 226
             F+R HP++MHTI++SI +++KG VQ+LFLRHEGYLGAIGAFL+GAE
Sbjct:   321 FIRGHPVTMHTITYSINFFTKGEVQALFLRHEGYLGAIGAFLKGAE 366
GO:0004594 "pantothenate kinase activity" evidence=IEA
GO:0015937 "coenzyme A biosynthetic process" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
UNIPROTKB|E2QXZ0 PANK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BV98 PANK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MLD0 PANK4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2387466 Pank4 "pantothenate kinase 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|628857 Pank4 "pantothenate kinase 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I3LPY8 PANK4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|H0YA26 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NVE7 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PHT6 PANK4 "Pantothenate kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q736G1COAW_BACC12, ., 7, ., 1, ., 3, 30.31910.60260.6485yesN/A
Q80YV4PANK4_MOUSE2, ., 7, ., 1, ., 3, 30.64150.75080.2719yesN/A
Q923S8PANK4_RAT2, ., 7, ., 1, ., 3, 30.64150.75080.2884yesN/A
Q6HHK0COAW_BACHK2, ., 7, ., 1, ., 3, 30.31210.60600.6521yesN/A
Q9NVE7PANK4_HUMAN2, ., 7, ., 1, ., 3, 30.63270.75080.2884yesN/A
Q04430PANK_YEAST2, ., 7, ., 1, ., 3, 30.43020.77770.6294yesN/A
B7H5Z8COAW_BACC42, ., 7, ., 1, ., 3, 30.30850.60260.6556yesN/A
Q5R5F8PANK4_PONAB2, ., 7, ., 1, ., 3, 30.62830.75080.2884yesN/A
Q81C81COAW_BACCR2, ., 7, ., 1, ., 3, 30.30850.60260.6556yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1.330.824
3rd Layer2.7.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
pfam03630329 pfam03630, Fumble, Fumble 1e-116
TIGR00555296 TIGR00555, panK_eukar, pantothenate kinase, eukary 6e-86
PLN02902 876 PLN02902, PLN02902, pantothenate kinase 2e-85
PLN02920398 PLN02920, PLN02920, pantothenate kinase 1 4e-83
COG5146342 COG5146, PanK, Pantothenate kinase, acetyl-CoA reg 8e-78
PTZ002971452 PTZ00297, PTZ00297, pantothenate kinase; Provision 1e-41
PRK13317277 PRK13317, PRK13317, pantothenate kinase; Provision 5e-33
>gnl|CDD|217646 pfam03630, Fumble, Fumble Back     alignment and domain information 
 Score =  337 bits (866), Expect = e-116
 Identities = 132/227 (58%), Positives = 170/227 (74%), Gaps = 2/227 (0%)

Query: 1   MECLIQGCNFLLRNISDEAFVYNRHGNPEYD--FQLAEPNIFPYLLVNIGSGVSIMKVES 58
           M+CLIQG NFLL+NI  E F Y+   + E     Q+   +++PYLLVNIGSGVSI+KV+ 
Sbjct: 103 MDCLIQGLNFLLKNIPAECFTYSNDTDGEKTEFQQINNDDLYPYLLVNIGSGVSILKVDG 162

Query: 59  DSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCL 118
             + ER+GG++ GGGTF GLGSLLT    FDELL++A+KGD+ + DMLVRDIYGGDY   
Sbjct: 163 PDQFERVGGSSLGGGTFLGLGSLLTGCTSFDELLDMAQKGDNSNVDMLVRDIYGGDYSKF 222

Query: 119 GLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFG 178
           GL GDLIASSFG+V ++       S  D+ARSLL  ISN+IGQIA L A+   LK++YFG
Sbjct: 223 GLKGDLIASSFGKVFRELKRLEDFSPEDIARSLLRMISNNIGQIAYLCALRFNLKRIYFG 282

Query: 179 GYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGA 225
           G F+RN+P++M T+S++I YWSKG +++ FLRHEGYLGA+GAFL G 
Sbjct: 283 GSFIRNNPITMKTLSYAINYWSKGELKAYFLRHEGYLGALGAFLSGK 329

Fumble is required for cell division in Drosophila. Mutants lacking fumble exhibit abnormalities in bipolar spindle organisation, chromosome segregation, and contractile ring formation. Analyses have demonstrated that encodes three protein isoforms, all of which contain a domain with high similarity to the pantothenate kinases of A. nidulans and mouse. A role of fumble in membrane synthesis has been proposed. Length = 329
>gnl|CDD|233021 TIGR00555, panK_eukar, pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>gnl|CDD|215489 PLN02902, PLN02902, pantothenate kinase Back     alignment and domain information
>gnl|CDD|215498 PLN02920, PLN02920, pantothenate kinase 1 Back     alignment and domain information
>gnl|CDD|227475 COG5146, PanK, Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional Back     alignment and domain information
>gnl|CDD|237346 PRK13317, PRK13317, pantothenate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 297
KOG2201|consensus371 100.0
PF03630341 Fumble: Fumble ; InterPro: IPR004567 Pantothenate 100.0
PLN02920398 pantothenate kinase 1 100.0
PLN02902 876 pantothenate kinase 100.0
PTZ002971452 pantothenate kinase; Provisional 100.0
COG5146342 PanK Pantothenate kinase, acetyl-CoA regulated [Co 100.0
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 100.0
PRK13317277 pantothenate kinase; Provisional 100.0
KOG2201|consensus371 99.77
PLN02902 876 pantothenate kinase 99.46
PTZ002971452 pantothenate kinase; Provisional 99.38
PLN02920398 pantothenate kinase 1 99.36
PF03630341 Fumble: Fumble ; InterPro: IPR004567 Pantothenate 99.34
COG5146342 PanK Pantothenate kinase, acetyl-CoA regulated [Co 99.31
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 99.0
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 98.39
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.12
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.23
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 97.22
PRK09604332 UGMP family protein; Validated 96.9
TIGR03723314 bact_gcp putative glycoprotease GCP. This model re 96.7
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 96.68
TIGR00329305 gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami 96.63
PRK14878323 UGMP family protein; Provisional 96.6
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 96.43
PRK13317277 pantothenate kinase; Provisional 96.34
PRK03011358 butyrate kinase; Provisional 96.13
TIGR03722322 arch_KAE1 universal archaeal protein Kae1. This fa 95.99
PRK15027484 xylulokinase; Provisional 95.94
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 95.6
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 95.2
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 95.08
PRK09605 535 bifunctional UGMP family protein/serine/threonine 94.93
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 94.76
PTZ00294504 glycerol kinase-like protein; Provisional 94.76
COG0533342 QRI7 Metal-dependent proteases with possible chape 94.7
TIGR01311493 glycerol_kin glycerol kinase. This model describes 94.64
PRK00047498 glpK glycerol kinase; Provisional 94.62
PRK04123548 ribulokinase; Provisional 94.25
PLN02295512 glycerol kinase 93.83
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 93.31
PRK15080267 ethanolamine utilization protein EutJ; Provisional 92.73
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 92.06
PRK10331470 L-fuculokinase; Provisional 91.99
PLN02669556 xylulokinase 91.58
PRK07058396 acetate kinase; Provisional 90.88
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 90.68
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 90.52
TIGR02707351 butyr_kinase butyrate kinase. This model represent 90.38
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 90.15
KOG2517|consensus516 88.49
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 87.52
PRK12440397 acetate kinase; Reviewed 85.11
PF00814268 Peptidase_M22: Glycoprotease family; InterPro: IPR 83.52
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 82.56
PF00871388 Acetate_kinase: Acetokinase family; InterPro: IPR0 82.21
PRK12379396 propionate/acetate kinase; Provisional 80.9
PRK00180402 acetate kinase A/propionate kinase 2; Reviewed 80.81
COG0068750 HypF Hydrogenase maturation factor [Posttranslatio 80.76
PRK05082291 N-acetylmannosamine kinase; Provisional 80.44
>KOG2201|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.4e-88  Score=642.21  Aligned_cols=223  Identities=61%  Similarity=1.049  Sum_probs=215.2

Q ss_pred             CchhhchhhhhhhcCCCccEEeeCCCCCceeeccCC--CCCCCeEEEEcCCceEEEEEecCCceEEecccccChhhHHHH
Q psy11663          1 MECLIQGCNFLLRNISDEAFVYNRHGNPEYDFQLAE--PNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGL   78 (297)
Q Consensus         1 m~clv~G~~fll~~i~~e~f~y~~~~~~~~~~~~~~--~~~~PyLlVNIGSGvSi~kV~~~~~~~RIgGS~IGGGT~~GL   78 (297)
                      |+|||+|++|+++|+|+|||+|+++.+++++++...  +++||||||||||||||+||+++++|+|||||++||||||||
T Consensus       133 m~~LI~G~~f~l~~i~~E~fty~~~~~~~~~~~~~~~~d~~yPyLLVNIGSGVSIlkV~~~~~feRvgGsSlGGGTf~GL  212 (371)
T KOG2201|consen  133 MDCLIKGLNFLLSNIPAECFTYENDEDEEVEFQTNFCLDSPYPYLLVNIGSGVSILKVDGPDNFERVGGSSLGGGTFLGL  212 (371)
T ss_pred             HHHHHhhhHHHHhcCccceEEEecCCCcceecccCCccCCCCceEEEEcCCCeEEEEEecCCceeEecccccCCcchhhh
Confidence            899999999999999999999999999998887742  569999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCHHHHHHHHhcCCCCCCceeeccccCCCCCCCCCCccccccccccccccCCccCCCCHHHHHHHHHHHHHHH
Q psy11663         79 GSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISND  158 (297)
Q Consensus        79 ~~LLt~~~~fdeil~lA~~Gd~~~vDllV~DIYg~~~~~~gL~~d~~ASsFGK~~~~~~~~~~~s~eDia~SLl~Mv~~n  158 (297)
                      ++||||+++|||+++||++||+++|||||+||||++|+++|||++++||||||+... +++..++|||+|+|||.||+||
T Consensus       213 ~~LLTg~~sfdE~LelA~~Gd~~~vD~LV~DIYGg~y~~fGL~~~~iASSFGk~~~~-eK~~~~s~eDia~SlL~mIsnN  291 (371)
T KOG2201|consen  213 GSLLTGCKSFDELLELASRGDNRNVDMLVRDIYGGDYSRFGLKGDLIASSFGKVIRK-EKELSVSKEDIARSLLRMISNN  291 (371)
T ss_pred             HhHhcCCCCHHHHHHHHhcCCCchhhhhhhhccCccHhhcCCChhHHHHHHHHHhhc-ccccccChHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999864 4556799999999999999999


Q ss_pred             HHHHHHHHHHHcCCcEEEEeccccccchhcHHHHHHHhhhhccCCceEEEeccCCchhhHHHHHhh
Q psy11663        159 IGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRG  224 (297)
Q Consensus       159 IgqlA~l~A~~~~ik~Ivf~G~fi~~~~~~m~~l~~av~fws~g~~~a~Fl~h~gY~GAlg~~l~~  224 (297)
                      |||+|+|+|+++|++||||+|+|||+||++|++|+||++|||+|++||+|||||||+||+||||++
T Consensus       292 IGqiAyl~A~~~ni~rV~FgG~fiR~~~itM~tLsyAi~fWSkG~~kAlFLrHEGYlGalGAfL~~  357 (371)
T KOG2201|consen  292 IGQIAYLCALNENIKRVYFGGFFIRGHPITMKTLSYAINFWSKGELKALFLRHEGYLGALGAFLSY  357 (371)
T ss_pred             HHHHHHHHHHHhCccEEEEeeeEEecCceehHHHHHHHHHhccchHHhHhhhccchhHHHHHHhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999985

>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>PLN02902 pantothenate kinase Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>KOG2201|consensus Back     alignment and domain information
>PLN02902 pantothenate kinase Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway Back     alignment and domain information
>COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>TIGR03723 bact_gcp putative glycoprotease GCP Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>PRK03011 butyrate kinase; Provisional Back     alignment and domain information
>TIGR03722 arch_KAE1 universal archaeal protein Kae1 Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>PRK07058 acetate kinase; Provisional Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>TIGR02707 butyr_kinase butyrate kinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>KOG2517|consensus Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12440 acetate kinase; Reviewed Back     alignment and domain information
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PF00871 Acetate_kinase: Acetokinase family; InterPro: IPR000890 Acetate kinase, which is predominantly found in micro-organisms, facilitates the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation [, ] Back     alignment and domain information
>PRK12379 propionate/acetate kinase; Provisional Back     alignment and domain information
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed Back     alignment and domain information
>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05082 N-acetylmannosamine kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
3mk6_A376 Substrate And Inhibitor Binding To Pank Length = 37 8e-42
2i7p_A362 Crystal Structure Of Human Pank3 In Complex With Ac 1e-41
3sms_A382 Human Pantothenate Kinase 3 In Complex With A Panto 1e-41
2i7n_A360 Crystal Structure Of Human Pank1 Alpha: The Catalyt 2e-38
3smp_A386 Monoclinic Crystal Structure Of Human Pantothenate 3e-38
2ews_A287 Crystal Structure Of S.Aureus Pantothenate Kinase L 4e-04
>pdb|3MK6|A Chain A, Substrate And Inhibitor Binding To Pank Length = 376 Back     alignment and structure 
Iteration: 1

 Score =  167 bits (422), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 10/229 (4%)
Query: 1   MECLIQGCNFLLR---NISDEAFVYNRHGNPE----YDFQLAEPNIFPYLLVNIGSGVSI 53
           ++CL++G  ++     N   E + +     PE      F L +P  +P L+VNIGSGVSI
Sbjct: 147 LDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDP--YPLLVVNIGSGVSI 204
Query: 54  MKVESDSKVERIXXXXXXXXXXXXXXXXXXKAKGFDELLELAEKGDHRHADMLVRDIYGG 113
           + V S    +R+                    + F+E LE+A KGD   AD LVRDIYGG
Sbjct: 205 LAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGG 264
Query: 114 DYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLK 173
           DY+  GLPG  +ASSFG +  ++  E   S+ DLAR+ L  I+N+IG +A + A+  K+ 
Sbjct: 265 DYERFGLPGWAVASSFGNMIYKEKRE-SVSKEDLARATLVTITNNIGSVARMCAVNEKIN 323
Query: 174 KVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFL 222
           +V F G FLR + LSM  +++++ YWSKG +++LFL HEGY GA+GA L
Sbjct: 324 RVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALL 372
>pdb|2I7P|A Chain A, Crystal Structure Of Human Pank3 In Complex With Accoa Length = 362 Back     alignment and structure
>pdb|3SMS|A Chain A, Human Pantothenate Kinase 3 In Complex With A Pantothenate Analog Length = 382 Back     alignment and structure
>pdb|2I7N|A Chain A, Crystal Structure Of Human Pank1 Alpha: The Catalytic Core Domain In Complex With Accoa Length = 360 Back     alignment and structure
>pdb|3SMP|A Chain A, Monoclinic Crystal Structure Of Human Pantothenate Kinase 1 Alpha Length = 386 Back     alignment and structure
>pdb|2EWS|A Chain A, Crystal Structure Of S.Aureus Pantothenate Kinase Length = 287 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 6e-82
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 2e-57
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Length = 360 Back     alignment and structure
 Score =  250 bits (639), Expect = 6e-82
 Identities = 100/228 (43%), Positives = 144/228 (63%), Gaps = 6/228 (2%)

Query: 1   MECLIQGCNFLLR---NISDEAFVYNRHGNPEYDFQLAE--PNIFPYLLVNIGSGVSIMK 55
           ++CLIQG  ++     N   E + +    NPE   +      N +P LLVN+GSGVSI+ 
Sbjct: 131 LDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPMLLVNMGSGVSILA 190

Query: 56  VESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDY 115
           V S    +R+ GT+ GGGTF GL  LLT  + F+E LE+A KGD  + D LV+DIYGGDY
Sbjct: 191 VYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDY 250

Query: 116 KCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKV 175
           +  GL G  +ASSFG +  ++  +   S+ DLAR+ L  I+N+IG IA + A+   + +V
Sbjct: 251 ERFGLQGSAVASSFGNMMSKEKRD-SISKEDLARATLVTITNNIGSIARMCALNENIDRV 309

Query: 176 YFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLR 223
            F G FLR + +SM  +++++ +WSKG +++LFL HEGY GA+GA L 
Sbjct: 310 VFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLE 357
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Length = 287 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 100.0
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 100.0
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 98.66
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 98.62
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.61
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 97.07
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 96.98
2w40_A503 Glycerol kinase, putative; closed conformation, ma 96.87
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 96.75
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 96.72
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 96.64
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 96.64
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 96.64
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.57
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 96.47
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 96.38
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 96.37
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 96.24
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.19
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 96.05
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 95.66
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 95.53
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 95.26
1saz_A381 Probable butyrate kinase 2; askha (acetate and sug 95.26
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 95.08
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 95.05
3ven_A 576 O-carbamoyltransferase TOBZ; antibiotic biosynthes 94.89
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 94.82
3en9_A 540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 94.78
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 94.02
2gup_A292 ROK family protein; sugar kinase, streptococcus pn 93.82
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 93.74
2aa4_A289 Mannac kinase, putative N-acetylmannosamine kinase 93.35
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 91.68
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 91.18
3r9p_A391 ACKA; ssgcid, seattle structural genomics center f 89.24
4ijn_A398 Acetate kinase, acetokinase; proprionate kinase, A 88.8
3khy_A384 Propionate kinase; csgid, IDP01739, ATP-binding, n 88.79
2iir_A403 Acetate kinase; transferase; 3.30A {Thermotoga mar 87.92
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 87.45
3sk3_A415 Acetate kinase, acetokinase; actin-like ATPase dom 86.77
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 86.53
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 86.08
1g99_A408 Acetate kinase; alpha/beta, askha (acetate and sug 85.14
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 84.39
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 83.59
3vth_A761 Hydrogenase maturation factor; carbamoyltransfer, 83.45
2e1z_A415 Propionate kinase; TDCD, native, acetate kinase, n 83.44
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 83.35
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 81.42
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 81.35
3ttc_A657 HYPF, transcriptional regulatory protein; Zn finge 80.3
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
Probab=100.00  E-value=6.4e-65  Score=489.20  Aligned_cols=223  Identities=45%  Similarity=0.778  Sum_probs=207.2

Q ss_pred             Cchhhchhhhhh---hcCCCccEEeeCCCCCceeec--cCCCCCCCeEEEEcCCceEEEEEecCCceEEecccccChhhH
Q psy11663          1 MECLIQGCNFLL---RNISDEAFVYNRHGNPEYDFQ--LAEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTF   75 (297)
Q Consensus         1 m~clv~G~~fll---~~i~~e~f~y~~~~~~~~~~~--~~~~~~~PyLlVNIGSGvSi~kV~~~~~~~RIgGS~IGGGT~   75 (297)
                      |+|+++|++|++   +++|+|+|+|+++.+++....  ...+++|||||||||||||+++|+++++|+|||||++|||||
T Consensus       131 ~~c~~~G~~~l~~~~~~~~~e~~t~~~~~~~~~~~~~~~~~~~~~PyllVnIGsGvSiikv~~~~~f~rvgG~siGGGTf  210 (360)
T 2i7n_A          131 LDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTF  210 (360)
T ss_dssp             HHHHHHHHHHHHHHCBTTBCSEEEEESTTCTTTCEEEEECCSSCCSEEEEEESSSEEEEEEEETTEEEEEEEESCSHHHH
T ss_pred             HHHHHHHHHHHhcccccCCceeEEeccccccccccccccccccCCceEEEEeCCCcEEEEEcCCCCEEEeccccCccHhH
Confidence            689999999999   689999999998766543321  134677999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCHHHHHHHHhcCCCCCCceeeccccCCCCCCCCCCccccccccccccccCCccCCCCHHHHHHHHHHHH
Q psy11663         76 WGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAI  155 (297)
Q Consensus        76 ~GL~~LLt~~~~fdeil~lA~~Gd~~~vDllV~DIYg~~~~~~gL~~d~~ASsFGK~~~~~~~~~~~s~eDia~SLl~Mv  155 (297)
                      |||++|||++.||||+++||++||+++|||+|+||||++|+++|||.|++||||||+... .+++.+++||||+||+.||
T Consensus       211 lGL~~lLtg~~~~dEl~~lA~~Gd~~~vDllV~DIYg~~y~~~gL~~~~~ASsFGk~~~~-~~~~~~~~eDIa~gll~sV  289 (360)
T 2i7n_A          211 LGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSK-EKRDSISKEDLARATLVTI  289 (360)
T ss_dssp             HHHHHHHHCCCSHHHHHHHHHHCCGGGTSEEHHHHHSSCBGGGTBCTTSEEETTTTTTSH-HHHTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCHHHHHHHHHcCCCCcccceeeecccCcccccCCCccceeehhhhHhhH-hhhcCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999631 1246899999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEEeccccccchhcHHHHHHHhhhhccCCceEEEeccCCchhhHHHHHhh
Q psy11663        156 SNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRG  224 (297)
Q Consensus       156 ~~nIgqlA~l~A~~~~ik~Ivf~G~fi~~~~~~m~~l~~av~fws~g~~~a~Fl~h~gY~GAlg~~l~~  224 (297)
                      +++|+|+|+++|+.+++++|||+|+|+++||.+|+.|++++.|||+++++++|++|++|+|||||+|..
T Consensus       290 a~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~  358 (360)
T 2i7n_A          290 TNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL  358 (360)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999999975
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A Back     alignment and structure
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis} Back     alignment and structure
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp} Back     alignment and structure
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima} Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A* Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Back     alignment and structure
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A* Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 297
d2i7na2212 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 3e-69
d2ewsa1267 c.55.1.14 (A:1-267) Type II pantothenate kinase, C 1e-20
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 212 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  212 bits (540), Expect = 3e-69
 Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 7/213 (3%)

Query: 18  EAFVYNRHGNPEYDFQLAEP----NIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGG 73
           E + +    NPE   +  +P    N +P LLVN+GSGVSI+ V S    +R+ GT+ GGG
Sbjct: 3   ECYYFENPTNPELCQK--KPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGG 60

Query: 74  TFWGLGSLLTKAKGFDELLELAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVC 133
           TF GL  LLT  + F+E LE+A KGD  + D LV+DIYGGDY+  GL G  +ASSFG + 
Sbjct: 61  TFLGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMM 120

Query: 134 KQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLKKVYFGGYFLRNHPLSMHTIS 193
            ++  +   S+ DLAR+ L  I+N+IG IA + A+   + +V F G FLR + +SM  ++
Sbjct: 121 SKEKRD-SISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLA 179

Query: 194 FSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGAE 226
           +++ +WSKG +++LFL HEGY GA+GA L   +
Sbjct: 180 YAMDFWSKGQLKALFLEHEGYFGAVGALLELFK 212
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Length = 267 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 100.0
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 99.74
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.29
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 97.87
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 96.08
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 95.81
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 95.71
d1z05a2197 Transcriptional regulator VC2007 {Vibrio cholerae 94.93
d2gupa2175 Hypothetical protein SP2142 {Streptococcus pneumon 94.92
d1zc6a2171 Probable N-acetylglucosamine kinase CV2896 {Chromo 92.23
d2ch5a1227 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 91.62
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 91.61
d1saza2203 butyrate kinase 2 {Thermotoga maritima [TaxId: 233 91.23
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 91.02
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 88.46
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 86.22
d1g99a2201 Acetate kinase {Archaeon Methanosarcina thermophil 85.61
d1z6ra3196 Mlc protein {Escherichia coli [TaxId: 562]} 85.44
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 80.64
d2e1za2205 Propionate kinase {Salmonella typhimurium [TaxId: 80.41
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-55  Score=389.44  Aligned_cols=209  Identities=45%  Similarity=0.777  Sum_probs=194.0

Q ss_pred             CCccEEeeCCCCCceeecc--CCCCCCCeEEEEcCCceEEEEEecCCceEEecccccChhhHHHHHHhhcCCCCHHHHHH
Q psy11663         16 SDEAFVYNRHGNPEYDFQL--AEPNIFPYLLVNIGSGVSIMKVESDSKVERIGGTATGGGTFWGLGSLLTKAKGFDELLE   93 (297)
Q Consensus        16 ~~e~f~y~~~~~~~~~~~~--~~~~~~PyLlVNIGSGvSi~kV~~~~~~~RIgGS~IGGGT~~GL~~LLt~~~~fdeil~   93 (297)
                      .+|||+|.++..|+.+.+.  .-.++||||+|||||||||++|+++++|+|||||++|||||+||++||+|..+++||.+
T Consensus         1 ~~~~~~~~~~~~~~~~~k~~~~~~~pfP~llv~iGsGtsii~v~~~~~~~~iggT~~gGgtf~gla~lLlg~~~~~eI~k   80 (212)
T d2i7na2           1 KPECYYFENPTNPELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALE   80 (212)
T ss_dssp             BCSEEEEESTTCTTTCEEEEECCSSCCSEEEEEESSSEEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHH
T ss_pred             CCceEEecCCCChHHhhcCCCcCCCCCCEEEEECCCCeEEEEEecCCceEEecCCcccHHHHHHHHHHhcCCCCHHHHHH
Confidence            3699999988777543322  33567999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCceeeccccCCCCCCCCCCccccccccccccccCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q psy11663         94 LAEKGDHRHADMLVRDIYGGDYKCLGLPGDLIASSFGRVCKQDTMEGQCSEADLARSLLFAISNDIGQIASLYAMMHKLK  173 (297)
Q Consensus        94 lA~~Gd~~~vDllV~DIYg~~~~~~gL~~d~~ASsFGK~~~~~~~~~~~s~eDia~SLl~Mv~~nIgqlA~l~A~~~~ik  173 (297)
                      ||++||++++|++|+|||++++...||+.+++|++|||+... +..++.+++|+|+|++.||.++|+++++++|+.++++
T Consensus        81 lA~~G~~~~~dl~~~di~~~~~s~sgL~t~~~a~~fgk~~~~-~~~~~~~~~DiaaS~q~~v~~~l~~~a~~aa~~~~~k  159 (212)
T d2i7na2          81 MAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSK-EKRDSISKEDLARATLVTITNNIGSIARMCALNENID  159 (212)
T ss_dssp             HHHHCCGGGTSEEHHHHHSSCBGGGTBCTTSEEETTTTTTSH-HHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHhcCCccccCccCCCcCCCCCCcccCCHHHHHHHhhhhhhc-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999998742 3346789999999999999999999999999999999


Q ss_pred             EEEEeccccccchhcHHHHHHHhhhhccCCceEEEeccCCchhhHHHHHhhc
Q psy11663        174 KVYFGGYFLRNHPLSMHTISFSIKYWSKGAVQSLFLRHEGYLGAIGAFLRGA  225 (297)
Q Consensus       174 ~Ivf~G~fi~~~~~~m~~l~~av~fws~g~~~a~Fl~h~gY~GAlg~~l~~~  225 (297)
                      +|+|+|.+..|+++.++.++.+.+||++.+++++|++|++|+|||||+|...
T Consensus       160 ~iv~~Ggv~aN~~lr~~l~~~~~~~~~~~~i~~~Fp~~~~y~galGA~l~~~  211 (212)
T d2i7na2         160 RVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLELF  211 (212)
T ss_dssp             CEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHHT
T ss_pred             EEEEECcHhhCHHHHHHHHHHHHHHHhhCCceEEecCChhhhHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999864
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1saza2 c.55.1.2 (A:173-375) butyrate kinase 2 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1g99a2 c.55.1.2 (A:198-398) Acetate kinase {Archaeon Methanosarcina thermophila [TaxId: 2210]} Back     information, alignment and structure
>d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2e1za2 c.55.1.2 (A:193-397) Propionate kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure